BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780421|ref|YP_003064834.1| hypothetical protein
CLIBASIA_01530 [Candidatus Liberibacter asiaticus str. psy62]
(218 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780421|ref|YP_003064834.1| hypothetical protein CLIBASIA_01530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040098|gb|ACT56894.1| hypothetical protein CLIBASIA_01530 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 218
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/218 (100%), Positives = 218/218 (100%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA
Sbjct: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL
Sbjct: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK
Sbjct: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
AKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK
Sbjct: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
>gi|315122135|ref|YP_004062624.1| hypothetical protein CKC_01925 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495537|gb|ADR52136.1| hypothetical protein CKC_01925 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 220
Score = 278 bits (710), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 173/218 (79%), Gaps = 1/218 (0%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M+SN D +S K CK+ K YK I PLLIL++LSLA W YL GS+ K KN GE+F+QA
Sbjct: 1 MKSNKDTSSCKEGCKIKKYGYKLIVPLLILIVLSLASWLYLH-GSYNKPKNPAGEDFSQA 59
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L N+NKLDDAR +FEKILS DN+ Y+ ++NMYIASILV KGD K+A+E FLKV NDDL
Sbjct: 60 ISLLNNNKLDDARIAFEKILSYDNRSYDSIANMYIASILVTKGDVKSASEKFLKVGNDDL 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A VRY A L AA ILVDT SY++ISKILQKL +PSNPMH ANEILGISA+K GK++K
Sbjct: 120 ALPVVRYTAILHAAWILVDTVSYDDISKILQKLIDPSNPMHPAANEILGISAMKCGKIEK 179
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
A++IFEE+ KD NSP GISTRSQ++LANIIAS++ KK
Sbjct: 180 ARSIFEEIVKDPNSPPGISTRSQIMLANIIASNKETKK 217
>gi|16264870|ref|NP_437662.1| hypothetical protein SM_b20996 [Sinorhizobium meliloti 1021]
gi|15141009|emb|CAC49522.1| HYPOTHETICAL PROTEIN SM_b20996 [Sinorhizobium meliloti 1021]
Length = 222
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+D E + G+ F AL L NK D+A ++ ++ Y L+ + +A++
Sbjct: 49 YDYWQESSSSQSGDTFLAALNLARENKSDEALAALTELEKDGYGSYPVLAQLRVATLQAQ 108
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
KG+T +A F ++ D P A+R AA L+AA +L+D +YE++S +++L+ P N M
Sbjct: 109 KGETDSAVAAFSEIGRDTRIPAALRDAARLRAAYLLIDAGTYEQVSSEVEQLAVPQNAMR 168
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A E LG+SA K G KAK+ F+++ D SP GI R+QM+L ++IAS
Sbjct: 169 HSAREALGLSAYKAGDYAKAKSWFQQIVDDAQSPRGIMNRAQMLL-DVIAS 218
>gi|307307990|ref|ZP_07587708.1| Protein of unknown function DUF2133 [Sinorhizobium meliloti BL225C]
gi|306901394|gb|EFN31998.1| Protein of unknown function DUF2133 [Sinorhizobium meliloti BL225C]
Length = 222
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
IA L++L + + Y + S + G+ F AL L NK D+A ++ ++
Sbjct: 35 IAVLIVLGTVGKVGYDYWQEASSSQS----GDTFLAALNLARENKSDEALAALTELEKDG 90
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y L+ + +A++ KG+T +A F + D P A+R AA L+AA +L+D +Y
Sbjct: 91 YGSYPVLAQLRVATLQAQKGETDSAVAAFSGIGRDTRIPAALRDAARLRAAYLLIDAGTY 150
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
E++S +++L+ P N M A E LG+SA K G KAK+ F+++ D SP GI R+Q
Sbjct: 151 EQVSSEVEQLAVPQNAMRHSAREALGLSAYKAGDYAKAKSWFQQIVDDAQSPRGIMNRAQ 210
Query: 204 MILANIIAS 212
M+L ++IAS
Sbjct: 211 MLL-DVIAS 218
>gi|227822914|ref|YP_002826886.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227341915|gb|ACP26133.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 222
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+A L++L + + Y E + G+ F AL+L N+ ++A + K+ +
Sbjct: 35 VAALIVLGTVGKVGYDYW----QESSSSQSGDAFLVALDLAKENRSEEALGALTKLEQEG 90
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y L+ + A++ KG+T+ A F ++ D+ P A+R AA L+AA +L+DT +Y
Sbjct: 91 YGSYPVLARLRAATLKAQKGETEAAFAAFSEIGKDNRIPAALRDAARLRAAYLLIDTGTY 150
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
+++S +++L+ P N M A E LG++A K G KAK F+++A D SP G++ R+Q
Sbjct: 151 DQVSAEVEQLAVPQNAMRHSAREALGLAAFKAGDYAKAKGWFQQIADDTESPRGVANRAQ 210
Query: 204 MILANIIAS 212
M+L I AS
Sbjct: 211 MLLDVIAAS 219
>gi|307319942|ref|ZP_07599365.1| Protein of unknown function DUF2133 [Sinorhizobium meliloti AK83]
gi|306894482|gb|EFN25245.1| Protein of unknown function DUF2133 [Sinorhizobium meliloti AK83]
Length = 222
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
IA L++L + + Y + S + G+ F AL L NK D+A ++ ++
Sbjct: 35 IAVLIVLGTVGKVGYDYWQEASSSQS----GDTFLAALNLARENKSDEALAALTELEKDG 90
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y L+ + +A++ KG+T A F + D P A+R AA L+AA +L+D +Y
Sbjct: 91 YGSYPVLAQLRVATLQAQKGETDAAVAAFSGIGRDTRIPAALRDAARLRAAYLLIDAGTY 150
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
E++S +++L+ P N M A E LG+SA K G KAK+ F+++ D SP GI R+Q
Sbjct: 151 EQVSSEVEQLAVPQNAMRHSAREALGLSAYKAGDYAKAKSWFQQIVDDAQSPRGIMNRAQ 210
Query: 204 MILANIIAS 212
M+L ++IAS
Sbjct: 211 MLL-DVIAS 218
>gi|150376650|ref|YP_001313246.1| hypothetical protein Smed_4513 [Sinorhizobium medicae WSM419]
gi|150031197|gb|ABR63313.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 222
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 1/171 (0%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+D E + G+ F AL L NK D+A ++ + + Y L+ + +A++
Sbjct: 49 YDYWQESSSSQSGDTFLVALNLARENKSDEALAALTGLEKEGYGSYPVLAQLRLATLQAQ 108
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
KG+T A + F + D P A+R AA L+AA +L+D +YE++S +++L+ P N M
Sbjct: 109 KGETDAAVKAFSGIGRDTRIPTALRDAARLRAAYLLIDAGTYEQVSSEVEQLAVPQNAMR 168
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A E LG+SA K G KAK+ F+++ D SP G+ R+QM+L ++IAS
Sbjct: 169 HSAREALGLSAYKAGDYAKAKSWFQQIVDDTESPRGVMNRAQMLL-DVIAS 218
>gi|116253296|ref|YP_769134.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257944|emb|CAK09042.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 227
Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 100/172 (58%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L+D + + + G+ F A++L + NK D+A ++ +K+ + + Y L+ M A++ V
Sbjct: 48 LYDYWDDNRSSGTGDQFLAAMKLADENKNDEALAALDKLEKEGHGAYPVLARMRAATVQV 107
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
KGDT A F ++ D+ P AVR AA ++A +L++ +YEE+S +++++ P N
Sbjct: 108 QKGDTVAAIAAFNEIGKDNAVPAAVRDAAKMRAGWLLIENGTYEEVSAAIEEMAVPGNAF 167
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A E LG++A K G + +A+ F+ + D +SP ++ R+ M+L I AS
Sbjct: 168 RHSAREALGLAAYKAGNMAQARQWFQSIVDDTDSPRNVANRAHMMLDLITAS 219
>gi|86358710|ref|YP_470602.1| hypothetical protein RHE_CH03109 [Rhizobium etli CFN 42]
gi|86282812|gb|ABC91875.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 227
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
++I + IL++L A L++ + + + G+ F A++L + NK D+A ++ EK+
Sbjct: 30 RYIIVVAILIVLGTAG-KVLYEYWDDTRSSGAGDQFLAAMKLADENKNDEALAALEKLEK 88
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ + Y L+ M A++ KGD A F ++ D+ P AVR A ++A +L++
Sbjct: 89 EGHGAYPVLARMRAATVQAQKGDAGAAIAAFNEIGKDNSVPAAVRDVAKMRAGWLLIENG 148
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
SYE++S ++++++ PSN A E LG++A K G + +A+ F+ + D SP ++ R
Sbjct: 149 SYEQVSAVIEEMAVPSNAFRHSAREALGLAAYKAGNMAQARQWFQSIVDDAGSPRPVANR 208
Query: 202 SQMILANIIAS 212
+QM+L I AS
Sbjct: 209 AQMMLDLITAS 219
>gi|241205815|ref|YP_002976911.1| hypothetical protein Rleg_3116 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859705|gb|ACS57372.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 227
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 99/172 (57%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L+D + + + G+ F A++L + NK D+A ++ K+ + + Y L+ M A++ V
Sbjct: 48 LYDYWDDNRSSGTGDQFLAAMKLADENKNDEALAALNKLEKEGHGAYPVLARMRAATVQV 107
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
KGDT A F ++ D+ P AVR AA ++A +L++ +YE++S +++++ P N
Sbjct: 108 QKGDTAAAITAFNEIGKDNAVPAAVRDAAKMRAGWLLIENGTYEQVSAAIEEMAVPGNAF 167
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A E LG++A K G + +A+ F+ + D +SP ++ R+ M+L I AS
Sbjct: 168 RHSAREALGLAAYKAGNMAQARQWFQSIVDDTDSPRNVANRAHMMLDLITAS 219
>gi|218516155|ref|ZP_03512995.1| hypothetical protein Retl8_22038 [Rhizobium etli 8C-3]
Length = 227
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+A +LI++ + + + +D S + + G+ F A++L + NK D+A ++ +K+ +
Sbjct: 34 VAAILIVVGTAGKVLYEYWDDS---RSSGAGDQFLAAMKLADENKNDEALAALDKLEKEG 90
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
+ Y L+ M A++ KGD A F ++ D+ P AVR AA ++A +L++ SY
Sbjct: 91 HGAYPVLARMRAATVQAQKGDAAAAIAAFNEIGKDNGVPAAVRDAARMRAGWLLIENGSY 150
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
E++S +++++ P N A E LG++A K G + +A+ F+ + D SP ++ R+Q
Sbjct: 151 EQVSAAIEEMAVPGNAFRHSAREALGLAAYKAGNMAQARQWFQSIIDDAESPRPVANRAQ 210
Query: 204 MILANIIASDQ 214
M+L I AS +
Sbjct: 211 MMLDLITASGE 221
>gi|190892853|ref|YP_001979395.1| hypothetical protein RHECIAT_CH0003269 [Rhizobium etli CIAT 652]
gi|190698132|gb|ACE92217.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327189206|gb|EGE56386.1| hypothetical protein RHECNPAF_700018 [Rhizobium etli CNPAF512]
Length = 227
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 107/189 (56%), Gaps = 3/189 (1%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+A +LI++ + + L+D + + + G+ F A++L + NK D+A ++ +K+ +
Sbjct: 34 VAAILIVVGTAGKV---LYDYWDDSRSSGAGDQFLAAMKLADENKNDEALAALDKLEKEG 90
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
+ Y L+ M A++ KGD A F ++ D+ P AVR AA ++A +L++ SY
Sbjct: 91 HGAYPVLARMRAATVQAQKGDAAAAIAAFNEIGKDNGVPAAVRDAARMRAGWLLIENGSY 150
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
E++S +++++ P N A E LG++A K G + +A+ F+ + D SP ++ R+Q
Sbjct: 151 EQVSAAIEEMAVPGNAFRHSAREALGLAAYKAGNMAQARQWFQSIIDDAESPRPVANRAQ 210
Query: 204 MILANIIAS 212
M+L I AS
Sbjct: 211 MMLDLITAS 219
>gi|13476157|ref|NP_107727.1| hypothetical protein mlr7403 [Mesorhizobium loti MAFF303099]
gi|14026917|dbj|BAB53513.1| mlr7403 [Mesorhizobium loti MAFF303099]
Length = 221
Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 101/181 (55%), Gaps = 5/181 (2%)
Query: 27 LLILMILSLA--IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
+ IL++L A + + +D E + N G+ F+QAL+L N K DDA ++ +++
Sbjct: 33 IAILVVLGTAAFVGYRYWD---ETRANRSGDAFSQALKLANDGKNDDALAALDQLEKDGY 89
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y L+ M A++ +KGDT A + F VA D P +R A L+AA +LVD S+
Sbjct: 90 GAYPLLARMRAATVKASKGDTAAAVKDFDDVAADTAIPQGIRDMARLRAALLLVDHGSFA 149
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
++S ++ L+ +N + A E LG++A K GK Q A +F+++A D+ +P R+ +
Sbjct: 150 DVSSRVEALTSDTNTLRHTAREALGLAAWKEGKTQDALKLFDQIAADDGAPRNTRERATL 209
Query: 205 I 205
+
Sbjct: 210 M 210
>gi|222149420|ref|YP_002550377.1| hypothetical protein Avi_3303 [Agrobacterium vitis S4]
gi|221736403|gb|ACM37366.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 223
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 106/195 (54%), Gaps = 3/195 (1%)
Query: 21 YKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE 77
++ + P+ I ++I+ + L+D + + + G+ F A +L K D A S +
Sbjct: 25 WRRLGPVFIGIAVLIVVGTAGYRLYDYYTDDRASKSGDRFLAATKLATDGKNDQALSDLQ 84
Query: 78 KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
+ Y L+ + AS++ KGD K A + F + D+ P +R A ++AA +L
Sbjct: 85 ALEKDGFGAYPVLAKLRAASLMAEKGDAKAAIDAFTAIGKDNSVPQVIRDVAHIRAAWLL 144
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
+D +YE++S ++ L+ P + A E LG++A K G+ ++A+ F+++ +D+ +P
Sbjct: 145 IDNGTYEQVSTEVEALAVPGQGLRHSAREALGLAAYKAGQTERAREWFQQITEDSEAPRN 204
Query: 198 ISTRSQMILANIIAS 212
++ R+Q++L NI A+
Sbjct: 205 VANRAQIMLDNIAAA 219
>gi|209550426|ref|YP_002282343.1| hypothetical protein Rleg2_2847 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536182|gb|ACI56117.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 227
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 98/172 (56%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L++ + + + G+ F A++L + NK D+A ++ +K+ + + Y L+ M A++
Sbjct: 48 LYEYWDDTRSSGAGDQFLAAMKLADENKNDEALAALDKLEKEGHGAYPVLARMRAATVQA 107
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
KGD A F ++ D+ P AVR AA ++A +L++ SYE++S +++++ P N
Sbjct: 108 QKGDAAAAIAAFNEIGKDNGVPAAVRDAAKMRAGWLLIENGSYEQVSAAIEEMAVPGNAF 167
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A E LG+++ K G + +A+ F+ + D +SP ++ R+ M+L I AS
Sbjct: 168 RHSAREALGLASYKAGNMAQARQWFQSIVDDTDSPRNVTNRAHMMLDLITAS 219
>gi|260460375|ref|ZP_05808627.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259034020|gb|EEW35279.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 221
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+A +L+++ + + + +D E + N G+ F+QAL+L N K D+A ++ +++
Sbjct: 32 VAAILVVLGTAAFVGYRYWD---ETRANRSGDAFSQALKLANDGKNDEALAALDQLEKDG 88
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y L+ M A++ +KGD A + F +VA D P +R A L+AA +LVD S+
Sbjct: 89 YGAYPLLARMRAATVKASKGDVDAAVKDFDEVAADTAIPQGIRDMARLRAALLLVDHGSF 148
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
++S ++ L+ +N + A E LG++A K GK Q A +F+++A D+ +P R+
Sbjct: 149 ADVSSRVEALTSDTNTLRHTAREALGLAAWKEGKTQDALKLFDQIASDDGAPRNTRERAT 208
Query: 204 MI 205
++
Sbjct: 209 LM 210
>gi|110633048|ref|YP_673256.1| hypothetical protein Meso_0691 [Mesorhizobium sp. BNC1]
gi|110284032|gb|ABG62091.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 223
Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 18 KCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
+ ++ P+ I L++L +A W +D + N G+ FAQALEL +A
Sbjct: 20 RVLWRRYGPIAIGLAALLVLGMAAWVA-YDHWWTSRANESGDRFAQALELAEEGNSQEAL 78
Query: 74 SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
E++ + Y L+ + A+ L D A F +VAND P A+R A L+A
Sbjct: 79 QLLEELENSGAGAYPVLARLRAATTLADSDDIDGAITKFDEVANDAAVPAAIRDVARLRA 138
Query: 134 ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
A +LVD SY +++ ++ LS +NPM A E + ++A K G + A ++F E+A D
Sbjct: 139 ALLLVDHGSYADVAARVETLSADTNPMRHIARETMALAAWKEGNRENALSLFGEIADDEQ 198
Query: 194 SPFGISTRSQMIL 206
+P G R++M++
Sbjct: 199 APAGARQRAEMMM 211
>gi|319784771|ref|YP_004144247.1| hypothetical protein Mesci_5097 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170659|gb|ADV14197.1| Protein of unknown function DUF2133 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 221
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Query: 13 KCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSH---EKKKNIVGENFAQALELFNSNKL 69
+ + + + P LI++ + + + F G E + N G+ F+QAL+L N K
Sbjct: 15 RREQAQALWDRFGPALIVVAILVVLGTAAFVGYRYWDETRANRSGDAFSQALKLANDGKN 74
Query: 70 DDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
D+A ++ +++ Y L+ M A++ KGD A + F +VA D P ++R A
Sbjct: 75 DEALTALDQLEKDGYGAYPLLARMRGATVKANKGDVPAAVKDFDEVAADTAIPQSIRDMA 134
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
L+AA +LVD S+ ++S ++ L+ +N + A E LG+SA K GK Q A +F+++A
Sbjct: 135 RLRAALLLVDHGSFADVSSRVEALTSDTNTLRHTAREALGLSAWKEGKTQDALKLFDQIA 194
Query: 190 KDNNSPFGISTRSQMI 205
D+ +P R+ ++
Sbjct: 195 ADDGAPRNTRERATLM 210
>gi|153007832|ref|YP_001369047.1| hypothetical protein Oant_0487 [Ochrobactrum anthropi ATCC 49188]
gi|151559720|gb|ABS13218.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 227
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ PLLI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQIWRNFGPLLIGGAVAIVLGTAGWVG-YQHWVDSKASASGDKFLAALDLASEGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++ + + Y L+ + AS++ KGD A + F +VA D+ P +R
Sbjct: 74 NDEALTALDDLEKTGYGSYPVLARLRAASVIADKGDAAGAVKAFDEVAADNAVPAPLRDV 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD+ SY++++K ++ LS NPM A E LG++A K + A +F+++
Sbjct: 134 ARLRAGYLLVDSGSYDDVAKHVETLSADGNPMRSSAREALGLAAWKAERFDDAVKLFQQI 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A D+ +P I R+ +L
Sbjct: 194 ANDSLAPANIRQRANTML 211
>gi|222086679|ref|YP_002545213.1| hypothetical protein Arad_3292 [Agrobacterium radiobacter K84]
gi|221724127|gb|ACM27283.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 227
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 87/159 (54%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G+ F AL L + NK D+A ++ I + Y L+ + A++ KGDT A F
Sbjct: 61 GDQFISALTLADQNKTDEALAALAAIEKDGSGSYPLLARLRAATLQAQKGDTAGAVAAFS 120
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ + P +R AA L+AA +LVDT +Y++++ Q+L+ P+N A ++LG++A
Sbjct: 121 AIGKETGLPTVIRDAARLRAAYLLVDTGTYDQVAAEAQELAVPANTFRHSARDVLGLAAY 180
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
K G KA+ F+ + D SP + R+QM+L I AS
Sbjct: 181 KAGDFAKARQWFQAIVDDPQSPRNVGNRAQMLLDLITAS 219
>gi|163761003|ref|ZP_02168081.1| hypothetical protein HPDFL43_03169 [Hoeflea phototrophica DFL-43]
gi|162281784|gb|EDQ32077.1| hypothetical protein HPDFL43_03169 [Hoeflea phototrophica DFL-43]
Length = 223
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G+ F ALEL D A + F+++ + + Y L+ M A++L +GD+ A F
Sbjct: 61 GDAFLAALELARDGNTDAALAGFQELEATGHGSYPVLARMRAATVLADQGDSAAAISAFS 120
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ D P A+R AA ++AA +LVD SY+++S ++ L+ P N A E LG++A
Sbjct: 121 SIGKDASQPTAIRDAARMRAAYLLVDHGSYDDVSAEVEVLAVPGNAARHAAREALGLAAF 180
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
K G + KA F E+ DN +P G++ R+++IL ++IA+
Sbjct: 181 KAGDLAKASEWFNEVINDNQTPRGVANRARVIL-DLIAA 218
>gi|159185150|ref|NP_355258.2| hypothetical protein Atu2301 [Agrobacterium tumefaciens str. C58]
gi|159140421|gb|AAK88043.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 223
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G+ F AL+L + NK DDA +F + + + Y L+ A++L KGD A F
Sbjct: 61 GDQFLAALKLASENKTDDALKAFADLETTGHGNYPVLAKFRSATLLSQKGDAAGAIAAFT 120
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ ND AP R A ++AA +LVD +Y+++ + + LS M A E LG++A
Sbjct: 121 AIGNDTSAPQVFRDTARVRAAWLLVDNGTYDQVVALAEPLSTDGQTMRASAREALGLAAY 180
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
K G KAK FE++ D +P ++ R+Q++L NI AS
Sbjct: 181 KAGDFAKAKQWFEQIMSDTQAPRNVTNRAQIMLDNITAS 219
>gi|239831250|ref|ZP_04679579.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823517|gb|EEQ95085.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 268
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ PL+I ++L A W + + K + G+ F AL+L + K
Sbjct: 56 RSERAKQVWRNFGPLVIGAAVAIVLGTAGWVG-YQHWTDSKASASGDKFLAALDLASEGK 114
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++ + Y L+ + AS++ KGD A + F VA D+ P +R
Sbjct: 115 NDEALAALADLEKTGYGSYPVLARLRAASVIADKGDAAGAVKAFDDVAADNAVPAPLRDV 174
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD+ SY++++K ++ LS NPM A E LG++A K + A +F+++
Sbjct: 175 ARLRAGYLLVDSGSYDDVAKRVETLSADGNPMRSSAREALGLAAWKAERFDDAVKLFQQI 234
Query: 189 AKDNNSPFGISTRSQMIL 206
A D+ +P I RS +L
Sbjct: 235 ANDSLAPANIRQRSNTML 252
>gi|319406080|emb|CBI79710.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 223
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 102/170 (60%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
K N VG+ F L+L +++ D+A F+ + D Y L+++ AS+ +GDT +
Sbjct: 54 KANNVGDTFITGLDLADAHHFDEAIKKFKSVKKSDFGGYPFLADLREASLWTERGDTAKS 113
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
++F +A D+ AP +R A ++AA ILVD +++++ + +++++ +PM A E+L
Sbjct: 114 VKMFDMIAADEKAPQILRKIAKIRAAYILVDIGTFDDVMQRVKEMANDIDPMRMSAREVL 173
Query: 169 GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
G++A K K++ A F+++ ++N F I+ R++++L I AS + NK+
Sbjct: 174 GLAAYKADKMENAVYYFQKIVEENALGFKITDRAKIMLELIQASGKVNKE 223
>gi|325293657|ref|YP_004279521.1| hypothetical protein AGROH133_07947 [Agrobacterium sp. H13-3]
gi|325061510|gb|ADY65201.1| hypothetical protein AGROH133_07947 [Agrobacterium sp. H13-3]
Length = 223
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G+ F AL+L + NK D+A +F + + + Y L+ A++L KGD A F
Sbjct: 61 GDQFIAALKLASDNKTDEALKAFADLETSGHGNYPVLAKFRSATLLSQKGDAAGAIAAFT 120
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ ND AP R A ++AA +LVD +Y+++ + + LS M A E LG++A
Sbjct: 121 AIGNDTSAPQVFRDTAKVRAAWLLVDNGTYDQVVALAEPLSGEGQTMRASAREALGLAAY 180
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
K G KAK FE++ D +P ++ R+Q++L NI AS
Sbjct: 181 KAGDFTKAKQWFEQIVSDAQAPRNVTNRAQIMLDNITAS 219
>gi|240850056|ref|YP_002971449.1| hypothetical protein Bgr_04400 [Bartonella grahamii as4aup]
gi|240267179|gb|ACS50767.1| hypothetical protein Bgr_04400 [Bartonella grahamii as4aup]
Length = 223
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 107/194 (55%), Gaps = 4/194 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
A L ILMI++ I+ + KK +G+ F ++L+ ++ D A E + +
Sbjct: 34 AILFILMIVAYQIYHH----QQIKKAGYIGDAFVKSLDFADTRHFDKAIKQLETVKTSHF 89
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y L+ + AS+L+ KGD + EIF VA D+ AP ++ A ++AA ILVDT +
Sbjct: 90 GGYPFLARLREASLLMEKGDIIKSVEIFDSVAADEKAPEILQKVAKIRAAYILVDTGTLA 149
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
++ K ++ ++ ++PMH A E LG++A K K+ +A F+++++ I+ R+++
Sbjct: 150 DVEKRIKDMTSDTDPMHMSAREALGLAAYKADKMDEAVYYFKKISEKGALGSKITDRARI 209
Query: 205 ILANIIASDQRNKK 218
+L I A + NK+
Sbjct: 210 MLELIQAEGKANKE 223
>gi|304391251|ref|ZP_07373195.1| putative tetratricopeptide repeat protein [Ahrensia sp. R2A130]
gi|303296607|gb|EFL90963.1| putative tetratricopeptide repeat protein [Ahrensia sp. R2A130]
Length = 228
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
I L + ++L++++W Y+ + S K+ G+ F A+ L K ++A ++ EK+ ++
Sbjct: 30 IIALAVAIVLAVSVWRYM-EYSAAKEAAASGDAFMSAVALAEDGKTEEAIAALEKLEAEH 88
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++ + AS L +G K A + V D++A +R A L+A ++VD +
Sbjct: 89 GGAYGAMAQLRAASELAKQGQKKEAIAAYDVVVADNMADEDLRSIARLRAGYLMVDEGTV 148
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
E++S + LS P P A E LG++ K G + KA F+E+AKD N+P I R
Sbjct: 149 EDVSSRVTSLSAPGAPYRSSALEALGLAYFKAGDLDKAFAQFDEIAKDANAPASIGQRVT 208
Query: 204 MILANIIAS 212
++L ++IA+
Sbjct: 209 IML-DVIAA 216
>gi|163867848|ref|YP_001609052.1| hypothetical protein Btr_0618 [Bartonella tribocorum CIP 105476]
gi|161017499|emb|CAK01057.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 223
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY 87
++L IL + I+ ++ + KK + VG+ F ++LEL ++ D A E + Y
Sbjct: 34 VLLFILMITIY-QIYHHTQIKKASYVGDAFVKSLELADTRHFDKAIKQLENVRDSHFGGY 92
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
L+ + AS+L+ +GD + EIF VA D+ AP +R A ++AA +LVD+ + +++
Sbjct: 93 PFLARLREASLLMEQGDFIKSVEIFDSVAADEKAPQILRKVAKIRAAYLLVDSGTLDDVK 152
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
K ++ ++ +PM A E LG++A K GKV +A F++++++ I+ R++++L
Sbjct: 153 KRVKDMTSDIDPMRMSAREALGLAAYKAGKVDEAVDYFQKISEEGVLRSNITDRARIMLE 212
Query: 208 NIIASDQRNKK 218
+ A + NK+
Sbjct: 213 LMQAEGKVNKE 223
>gi|319404572|emb|CBI78178.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 223
Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 100/170 (58%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
K N VG+ F +L+L +++ D+A E + + Y L+ + AS+ +GD +
Sbjct: 54 KANNVGDIFITSLDLADAHHFDEAIKKLESVKQSNFGGYPFLAGLLEASLWTQRGDNAKS 113
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+IF +A D+ AP +R A ++AA IL+D +++++ + +++++ +PM A E L
Sbjct: 114 VKIFDMIAADEKAPQILREVAKIRAAYILIDIGTFDDVMQRVKEMANDIDPMRMSAREAL 173
Query: 169 GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
G++A K K++KA F+++ ++N F I+ R++++L I AS + NK+
Sbjct: 174 GLAAYKANKMEKAVYYFKKIVEENALGFKITDRAKIMLELIQASGKVNKE 223
>gi|218661714|ref|ZP_03517644.1| hypothetical protein RetlI_20621 [Rhizobium etli IE4771]
Length = 213
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+A +LI++ + + F +D + + + G+ F A++L + NK D+A ++ K+ +
Sbjct: 34 VAAVLIVVGTAGKVLFEYWD---DTRSSGAGDQFLAAMKLADENKNDEALAALGKLEKEG 90
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
+ Y L+ M A++ KGD A F ++ D+ P AVR AA ++A +L++ SY
Sbjct: 91 HGAYPVLARMRAATVQAQKGDANAAITAFNEIGKDNSVPAAVRDAARMRAGWLLIENGSY 150
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
E++S +++++ P N A E LG+++ K G + +A+ F + P
Sbjct: 151 EQVSAAVEEMAVPGNAFRHSAREALGLASYKAGNMAQARQWFPVDCRRRRKP 202
>gi|49475206|ref|YP_033247.1| hypothetical protein BH04070 [Bartonella henselae str. Houston-1]
gi|49238011|emb|CAF27216.1| hypothetical protein BH04070 [Bartonella henselae str. Houston-1]
Length = 223
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Query: 23 WIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
W+ I+ +L + I + ++ KK +G+ F + L+ ++ D+A E + +
Sbjct: 29 WVVFAAIIFVLMIVI-YQIYHHVQMKKAGHIGDAFIEVLDFADTRHFDEAMKRLEDVKAS 87
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
+ Y L+ + AS+L+ +GD + E+F +A D+ AP +R A ++AA ILVDT S
Sbjct: 88 NFGGYPFLARLREASLLMEQGDAVKSVEVFDSIAADEKAPPILRAVAKIRAAYILVDTGS 147
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
+++ K ++ ++ M A E LG++A K K+ +A F +++K+ I+ R+
Sbjct: 148 LDDVKKRVKDMANDLGSMRMSAREALGLAAYKADKMDEAVDYFRKISKEGALGSKITERA 207
Query: 203 QMILANIIASDQRNKK 218
+++L + A + N++
Sbjct: 208 RIMLELMQAEGKANRE 223
>gi|161618353|ref|YP_001592240.1| hypothetical protein BCAN_A0382 [Brucella canis ATCC 23365]
gi|254703734|ref|ZP_05165562.1| hypothetical protein Bsuib36_07392 [Brucella suis bv. 3 str. 686]
gi|260567012|ref|ZP_05837482.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261754379|ref|ZP_05998088.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|161335164|gb|ABX61469.1| Hypothetical protein BCAN_A0382 [Brucella canis ATCC 23365]
gi|260156530|gb|EEW91610.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261744132|gb|EEY32058.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 223
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNFGPALIGAAVAVVLGTAGWVG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + +AS+L KGD A + F +++ D+ P +R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRVASVLADKGDAAAAVKAFDEISADNSVPEPLRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D+ +P R+ ++L
Sbjct: 194 AEDSLAPANARQRANIML 211
>gi|23501278|ref|NP_697405.1| hypothetical protein BR0374 [Brucella suis 1330]
gi|23347165|gb|AAN29320.1| conserved hypothetical protein [Brucella suis 1330]
Length = 223
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNFGPALIGVAVAVVLGTAGWVG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + +AS+L KGD A + F +++ D+ P +R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRVASVLADKGDAAAAVKAFDEISADNSVPEPLRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D +P R+ ++L
Sbjct: 194 AEDGLAPANARQRANIML 211
>gi|319407563|emb|CBI81213.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 223
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 101/170 (59%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
K N VG+ F +L+L +++ D+A E + + Y L+ + AS+ + +GD +
Sbjct: 54 KANNVGDIFMTSLDLADAHHFDEAIKKLESVKQSNFGGYPFLAGLREASLWMERGDNAKS 113
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
++F +A D+ AP +R A ++AA ILVD +++++ + +++++ +PM A E L
Sbjct: 114 VKMFDMIAADEKAPQILREVAKIRAAYILVDIGTFDDVMQRVKEIANDIDPMRMSAREAL 173
Query: 169 GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
G++A K K++KA F+++ ++N F I+ R++++L I A+ + NK+
Sbjct: 174 GLAAYKENKMEKAVYYFKKIVEENALGFKITDRAKIMLELIQANGKVNKE 223
>gi|319408189|emb|CBI81842.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 223
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 114/216 (52%), Gaps = 2/216 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + G+ + I +I +L++A++ G K I G+ F +L
Sbjct: 9 EVNEELRQEKVRAFWGRYSFLIIVSAIIF-VLAIAVYQIYHYGQMNKASKI-GDTFITSL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L +S + D+A + E + + D Y L+ + AS+L+ +G+ + E+F VA D A
Sbjct: 67 NLADSLQFDEAMNQLESVKTSDFGGYPFLARLREASLLMQQGNAVKSVEVFDAVAADKNA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P ++ A ++A+ ILVD +++++ K + ++ +PM A E+LG++A K K+ A
Sbjct: 127 PQILQRVAKIRASYILVDIGTFDDVKKRVNDMANDIDPMRMSAREVLGLAAYKANKIDDA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
F++++++N I R++++L I + + NK
Sbjct: 187 IYYFQKISEENVLGLKIIDRAKIMLELIQSERKVNK 222
>gi|319899215|ref|YP_004159308.1| hypothetical protein BARCL_1057 [Bartonella clarridgeiae 73]
gi|319403179|emb|CBI76738.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 223
Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 107/190 (56%), Gaps = 1/190 (0%)
Query: 30 LMILSLAIWFY-LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYN 88
+++ L I FY ++ K + VG+ F ++L+L +++ D+A E + D Y
Sbjct: 34 IIVFVLMIAFYQIYHHQQMNKASNVGDKFIKSLDLADAHHFDEAIKQLESVKKSDFGGYP 93
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
L+ + AS+ + +GD + ++F + ++ AP +R A ++AA ILVD +++++ +
Sbjct: 94 FLAGLREASLWMERGDAVKSVKMFDVIVANERAPQILRKVAKIRAAYILVDIGTFDDVIQ 153
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILAN 208
++ ++ +PM A E LG++A K K++ A F+++ ++ F I+ R++++L
Sbjct: 154 RVKDMANDIDPMRMSAREALGLAAYKANKMENAVYYFQKIVEEGAIGFKITDRAKIMLEL 213
Query: 209 IIASDQRNKK 218
I AS + NK+
Sbjct: 214 IQASGKVNKE 223
>gi|121602031|ref|YP_988692.1| hypothetical protein BARBAKC583_0373 [Bartonella bacilliformis
KC583]
gi|120614208|gb|ABM44809.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 223
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 109/197 (55%), Gaps = 10/197 (5%)
Query: 25 APLLILMILSLAIWFYLFDGSHEK---KKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
A + IL I+ ++ SH+K +NI G+ F ++L L +S+ D A + E + +
Sbjct: 34 AIIFILAIVGYQVY------SHKKMNEARNI-GDIFIKSLSLADSHDFDQAMNQLELVKA 86
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + AS+L +GD A E+F VA D+ AP ++ A +QAA ILVD
Sbjct: 87 SNFAGYPFLARLREASLLSEQGDAVRAVEMFDTVAFDEKAPQILQKVAKIQAAYILVDIG 146
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ +++ K +Q ++ +PM A E LG++A K K+ +A F++++++ N I R
Sbjct: 147 TLDDVKKRVQDIANDIDPMRISAREALGLAAYKADKMDEAVYYFQKISEEGNLGIKIVER 206
Query: 202 SQMILANIIASDQRNKK 218
++++L I A + NK+
Sbjct: 207 AKIMLELIQAEGKVNKE 223
>gi|163842661|ref|YP_001627065.1| hypothetical protein BSUIS_A0405 [Brucella suis ATCC 23445]
gi|163673384|gb|ABY37495.1| Hypothetical protein BSUIS_A0405 [Brucella suis ATCC 23445]
Length = 223
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNFGPALIGAAVAVVLGTAGWVG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPLRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKGERFDDAAKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D+ +P R+ ++L
Sbjct: 194 AEDSLAPANARQRANIML 211
>gi|225626892|ref|ZP_03784931.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254701189|ref|ZP_05163017.1| hypothetical protein Bsuib55_10067 [Brucella suis bv. 5 str. 513]
gi|254709530|ref|ZP_05171341.1| hypothetical protein BpinB_04507 [Brucella pinnipedialis B2/94]
gi|254713053|ref|ZP_05174864.1| hypothetical protein BcetM6_06734 [Brucella ceti M644/93/1]
gi|254716594|ref|ZP_05178405.1| hypothetical protein BcetM_09268 [Brucella ceti M13/05/1]
gi|254718561|ref|ZP_05180372.1| hypothetical protein Bru83_03299 [Brucella sp. 83/13]
gi|256031024|ref|ZP_05444638.1| hypothetical protein BpinM2_10279 [Brucella pinnipedialis
M292/94/1]
gi|256060516|ref|ZP_05450685.1| hypothetical protein Bneo5_09218 [Brucella neotomae 5K33]
gi|256368831|ref|YP_003106337.1| hypothetical protein BMI_I379 [Brucella microti CCM 4915]
gi|260168156|ref|ZP_05754967.1| hypothetical protein BruF5_07294 [Brucella sp. F5/99]
gi|261218393|ref|ZP_05932674.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261317056|ref|ZP_05956253.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261320758|ref|ZP_05959955.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261324510|ref|ZP_05963707.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261751726|ref|ZP_05995435.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261757614|ref|ZP_06001323.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265983536|ref|ZP_06096271.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265988094|ref|ZP_06100651.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294851759|ref|ZP_06792432.1| hypothetical protein BAZG_00674 [Brucella sp. NVSL 07-0026]
gi|306837297|ref|ZP_07470180.1| Hypothetical protein BROD_0083 [Brucella sp. NF 2653]
gi|225618549|gb|EEH15592.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|255998989|gb|ACU47388.1| hypothetical protein BMI_I379 [Brucella microti CCM 4915]
gi|260923482|gb|EEX90050.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293448|gb|EEX96944.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296279|gb|EEX99775.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261300490|gb|EEY03987.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261737598|gb|EEY25594.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261741479|gb|EEY29405.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|264660291|gb|EEZ30552.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|264662128|gb|EEZ32389.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294820348|gb|EFG37347.1| hypothetical protein BAZG_00674 [Brucella sp. NVSL 07-0026]
gi|306407610|gb|EFM63806.1| Hypothetical protein BROD_0083 [Brucella sp. NF 2653]
Length = 223
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNFGPALIGAAVAVVLGTAGWVG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPLRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D+ +P R+ ++L
Sbjct: 194 AEDSLAPANARQRANIML 211
>gi|256159078|ref|ZP_05456907.1| hypothetical protein BcetM4_09251 [Brucella ceti M490/95/1]
gi|256254427|ref|ZP_05459963.1| hypothetical protein BcetB_09088 [Brucella ceti B1/94]
gi|261221595|ref|ZP_05935876.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997558|ref|ZP_06110115.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920179|gb|EEX86832.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552026|gb|EEZ08016.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 223
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNFGPALIGAAVAVVLGTAGWAG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPLRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D+ +P R+ ++L
Sbjct: 194 AEDSLAPANARQRANIML 211
>gi|306842333|ref|ZP_07474992.1| Hypothetical protein BIBO2_2108 [Brucella sp. BO2]
gi|306845010|ref|ZP_07477591.1| Hypothetical protein BIBO1_1695 [Brucella sp. BO1]
gi|306274642|gb|EFM56431.1| Hypothetical protein BIBO1_1695 [Brucella sp. BO1]
gi|306287549|gb|EFM59008.1| Hypothetical protein BIBO2_2108 [Brucella sp. BO2]
Length = 223
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNFGPALIGAAVAVVLGTAGWVG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPLRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAVKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D+ +P R+ ++L
Sbjct: 194 AEDSLAPANARQRANIML 211
>gi|148559135|ref|YP_001258405.1| hypothetical protein BOV_0389 [Brucella ovis ATCC 25840]
gi|148370392|gb|ABQ60371.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 223
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNSGPALIGAAVAVVLGTAGWVG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPLRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D+ +P R+ ++L
Sbjct: 194 AEDSLAPANARQRANIML 211
>gi|62289365|ref|YP_221158.1| hypothetical protein BruAb1_0400 [Brucella abortus bv. 1 str.
9-941]
gi|82699290|ref|YP_413864.1| hypothetical protein BAB1_0404 [Brucella melitensis biovar Abortus
2308]
gi|189023619|ref|YP_001934387.1| hypothetical protein BAbS19_I03740 [Brucella abortus S19]
gi|237814854|ref|ZP_04593852.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254688682|ref|ZP_05151936.1| hypothetical protein Babob68_00559 [Brucella abortus bv. 6 str.
870]
gi|254693166|ref|ZP_05154994.1| hypothetical protein Babob3T_00550 [Brucella abortus bv. 3 str.
Tulya]
gi|254696809|ref|ZP_05158637.1| hypothetical protein Babob28_03613 [Brucella abortus bv. 2 str.
86/8/59]
gi|254707886|ref|ZP_05169714.1| hypothetical protein BpinM_13191 [Brucella pinnipedialis
M163/99/10]
gi|254729716|ref|ZP_05188294.1| hypothetical protein Babob42_00560 [Brucella abortus bv. 4 str.
292]
gi|256256929|ref|ZP_05462465.1| hypothetical protein Babob9C_06139 [Brucella abortus bv. 9 str.
C68]
gi|260545881|ref|ZP_05821622.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260754158|ref|ZP_05866506.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260757378|ref|ZP_05869726.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761202|ref|ZP_05873545.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883183|ref|ZP_05894797.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261213404|ref|ZP_05927685.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261315377|ref|ZP_05954574.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|297247780|ref|ZP_06931498.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|62195497|gb|AAX73797.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615391|emb|CAJ10360.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189019191|gb|ACD71913.1| hypothetical protein BAbS19_I03740 [Brucella abortus S19]
gi|237789691|gb|EEP63901.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260097288|gb|EEW81163.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260667696|gb|EEX54636.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671634|gb|EEX58455.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674266|gb|EEX61087.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872711|gb|EEX79780.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915011|gb|EEX81872.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261304403|gb|EEY07900.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|297174949|gb|EFH34296.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
Length = 223
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNFGPALIGAAVAVVLGTAGWVG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPLRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY+++++ ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAERVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D+ +P R+ ++L
Sbjct: 194 AEDSLAPANARQRANIML 211
>gi|49473956|ref|YP_031998.1| hypothetical protein BQ03100 [Bartonella quintana str. Toulouse]
gi|49239459|emb|CAF25810.1| hypothetical protein BQ03100 [Bartonella quintana str. Toulouse]
Length = 223
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 107/196 (54%), Gaps = 5/196 (2%)
Query: 24 IAPLLILMILSL-AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
+A ++ ++I+++ I+ Y KK +G+ F + L+ ++ D+A + + +
Sbjct: 32 VAAIIFVLIIAIHQIYHY----EQMKKAGHIGDAFMKVLDFADTRHFDEAMKQLKNVKAS 87
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
+ Y L+ M+ AS+L+ +GD + E F VA D+ AP +R A ++AA ILVDT +
Sbjct: 88 NFGGYPFLARMHEASLLMEQGDAVKSVEAFDSVAADEKAPPILRKVAKIRAAYILVDTGT 147
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
+++ K ++ + +PM A E LG++A K K+ +A F +++K+ + R+
Sbjct: 148 LDDVKKRVKDMENDIDPMRMSAREALGLAAYKADKMDEAVDYFRKISKEGVLGSKATERA 207
Query: 203 QMILANIIASDQRNKK 218
+++L + A + +K+
Sbjct: 208 RIMLELMQAEGKADKE 223
>gi|17987834|ref|NP_540468.1| hypothetical protein BMEI1551 [Brucella melitensis bv. 1 str. 16M]
gi|225851917|ref|YP_002732150.1| hypothetical protein BMEA_A0411 [Brucella melitensis ATCC 23457]
gi|256044099|ref|ZP_05447010.1| hypothetical protein Bmelb1R_06372 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112897|ref|ZP_05453813.1| hypothetical protein Bmelb3E_09470 [Brucella melitensis bv. 3 str.
Ether]
gi|256264571|ref|ZP_05467103.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563457|ref|ZP_05833943.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265990511|ref|ZP_06103068.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994339|ref|ZP_06106896.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17983562|gb|AAL52732.1| hypothetical membrane associated protein [Brucella melitensis bv. 1
str. 16M]
gi|225640282|gb|ACO00196.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|260153473|gb|EEW88565.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262765452|gb|EEZ11241.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001295|gb|EEZ13870.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094936|gb|EEZ18644.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326408415|gb|ADZ65480.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538129|gb|ADZ86344.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 223
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 13 KCKMGKCCYKWIAPLLI----LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ + K ++ P LI ++L A W + + K + G+ F AL+L + K
Sbjct: 15 RSERAKQVWRNFGPALIGAAVAVVLGTAGWVG-YQHWTDSKASASGDKFLAALDLAAAGK 73
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P R
Sbjct: 74 TDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPSRNI 133
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+A +LVD SY+++++ ++ LS NPM A E LG++A K + A +F+ +
Sbjct: 134 ARLRAGYLLVDNGSYDDVAERVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLFKLV 193
Query: 189 AKDNNSPFGISTRSQMIL 206
A+D+ +P R+ ++L
Sbjct: 194 AEDSLAPANARQRANIML 211
>gi|296284227|ref|ZP_06862225.1| hypothetical protein CbatJ_11411 [Citromicrobium bathyomarinum
JL354]
Length = 267
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 23 WIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
+I +++L +L+ A + F G E + E AL+ + LD A + +
Sbjct: 50 YIIGVVLLGLLAFAAVLF-FSGQSEGNRESESETLVTALDQVEAGNLDQADEALAPLAED 108
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
+ M A I + +G K AAE+F +VA D+ P ++R A L+A D+
Sbjct: 109 GRGGGKTQAQMLRAGIALEQGRAKEAAELFGQVAADEDVPQSIRDLAELRAVVAGYDSMK 168
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
E+ + L L++P P + A EIL ++ L+ G ++A +F E+A D++ P I R+
Sbjct: 169 PAEVIRRLTPLAQPDQPYYGSAGEILAMAYLEGGDKERAGKLFGEIAMDDDVPDTIRGRA 228
Query: 203 QMILANIIASD 213
+ +A+++ D
Sbjct: 229 RQ-MASVLGVD 238
>gi|312114897|ref|YP_004012493.1| hypothetical protein Rvan_2169 [Rhodomicrobium vannielii ATCC
17100]
gi|311220026|gb|ADP71394.1| hypothetical protein Rvan_2169 [Rhodomicrobium vannielii ATCC
17100]
Length = 239
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A+ L K +A + + Y L+ ++ AS +A+ AAE + VA+D+
Sbjct: 66 AITLHEDGKEAEAEKALADLAGSGPGAYRVLARLHAASESLAQKKYDQAAEDYRGVASDE 125
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
AP +R A +Q A++ VD SYE +S+ L ++ A ++LGI+A K GK
Sbjct: 126 NAPATLRDFARVQIAALSVDKESYESLSQTLAPYRSGTSEWRFAAKDVLGIAAFKEGKRD 185
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMILA 207
+A+ IF E+A D +P G+ R+Q++LA
Sbjct: 186 EAERIFGEIASDGAAPAGMRQRAQIMLA 213
>gi|90418691|ref|ZP_01226602.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336771|gb|EAS50476.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 360
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+A ++++++++ A+ +D + N G+ + AL+L K D+A ++ + + +
Sbjct: 31 LAAVILVVVITAAV--VGWDRYQTAQANASGDAYLAALQLARDGKPDEAITALDALAADS 88
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y L+ M I + A+G A F KVA D AP A+R A ++AA +LVD +
Sbjct: 89 YGAYPDLARMSIGGVYQAQGKFDEAVAAFDKVAADAGAPDALRDMAAVRAAYVLVDHGAL 148
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
++ +++L+ S + A E + ++A K + A +F++L D +P GI +R++
Sbjct: 149 SDVRSRVERLTGDSEALRFPAREAVALAAWKAEDTETATMLFQQLVDDPGAPNGIISRAR 208
Query: 204 MILANIIAS 212
++L ++IA+
Sbjct: 209 LML-DLIAA 216
>gi|114704715|ref|ZP_01437623.1| hypothetical protein FP2506_07261 [Fulvimarina pelagi HTCC2506]
gi|114539500|gb|EAU42620.1| hypothetical protein FP2506_07261 [Fulvimarina pelagi HTCC2506]
Length = 390
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 29 ILMILSLAIWFYLFDGSHE-KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY 87
+++I+ LA Y+ + + N G+ + A +L +D A +F I + Y
Sbjct: 33 VVLIVILATGAYVGWQRYSIAQANATGDRYLAAQDLVREGDIDGAIEAFRAIAEDGSGAY 92
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
L+ M IA+ G ++A + VAND P ++R A L+AA +LVD S +++
Sbjct: 93 PELAQMSIANAEAEAGRNEDAIASYEAVANDSSVPESLREMADLRAAYLLVDHGSLDDVR 152
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
++L+ NP+ A + +G++A K G + A+ +++ + + ++P GIS R+ +I
Sbjct: 153 ARAERLTGDDNPLRYAARDAIGLAAWKAGDTETARDLYQSILEAGDAPNGISQRAGLI 210
>gi|209885508|ref|YP_002289365.1| hypothetical protein OCAR_6387 [Oligotropha carboxidovorans OM5]
gi|209873704|gb|ACI93500.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 214
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 4/181 (2%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
+ +++I++ A + L+ +K G+ F AL L + + A ++FEKI + +
Sbjct: 30 IAVVLIVAAAGGWRLYQHFETQKAEEAGKAFQSALALTDPAQ---AEAAFEKIAASKARG 86
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
Y+ L+ + +A V K D K A + +AND VR A ++AA++++DT+SY+EI
Sbjct: 87 YSMLARLQVAGEAV-KQDPKKAIAAYDVIANDGSLDAPVREIARIRAANLMLDTASYDEI 145
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
K LQ + +N A E+L +SA + V+ A+ + + D SP + R++ +
Sbjct: 146 EKRLQGDATGTNTFRHSAREVLALSAWRANNVEAARRWIDMIGNDPQSPATLRRRAEALG 205
Query: 207 A 207
A
Sbjct: 206 A 206
>gi|118588126|ref|ZP_01545536.1| hypothetical protein SIAM614_11133 [Stappia aggregata IAM 12614]
gi|118439748|gb|EAV46379.1| hypothetical protein SIAM614_11133 [Stappia aggregata IAM 12614]
Length = 227
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 23 WIAPLLILMILSLAI---WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI 79
W+ + +L+++ W Y E++ G+ F +A++L + ++A + + ++
Sbjct: 27 WVLGVAVLIVVGTGGYRGWLYW----QEQQSQSAGDTFFEAVKLSEAQNYEEAAALYGEL 82
Query: 80 LSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
DN L Y L+ + A+ L G T+ A F ++ D A+R A L+AA +
Sbjct: 83 ---DNALGGYPALAKLRQATDLSNSGKTEEALAEFDALSRDSSIMEALRDVAALRAAYLA 139
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
VDT SY +I+ ++KL+ + P A E+L +SA K G ++ AK + +D +P
Sbjct: 140 VDTQSYGDIADRIEKLTGDTGPFRAAARELLALSAWKAGDIETAKQWISAIEEDTETPAD 199
Query: 198 ISTRSQMILANIIAS 212
+S R IL ++I S
Sbjct: 200 VSRRVS-ILGDVIRS 213
>gi|83310441|ref|YP_420705.1| hypothetical protein amb1342 [Magnetospirillum magneticum AMB-1]
gi|82945282|dbj|BAE50146.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 227
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ G K++ +++ L K D+A K+ ++ K Y L+++ A +
Sbjct: 54 WQGWEAKQRQAASARYSETAALIEQGKKDEAVEVLNKLSAEGPKGYRLLADLRKADMAQQ 113
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
GD AA ++ K+A D R +T++AA +++D+ I K ++ L+ ++
Sbjct: 114 AGDFTGAAALYGKIAADTSVDKVYRDMSTIRAAYLVLDSGDVAAIEKSVEPLAAEASSWR 173
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
A EIL ++ALK G+ +A +F ++A+D +P G+ TR+ +LA A+ QR +
Sbjct: 174 HSAREILALAALKRGETPRAAELFAKIAEDAAAPQGLRTRAAEMLA---ATGQRAR 226
>gi|254420734|ref|ZP_05034458.1| hypothetical protein BBAL3_3044 [Brevundimonas sp. BAL3]
gi|196186911|gb|EDX81887.1| hypothetical protein BBAL3_3044 [Brevundimonas sp. BAL3]
Length = 248
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 96/197 (48%), Gaps = 3/197 (1%)
Query: 18 KCCYKWIAPLLILMILSL--AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSS 75
+ W+ + ++++++L A+ ++ +D + K E + + +E + K +AR +
Sbjct: 19 RLARTWLPVVGVILVVALVAALGWWGWDSLNSSKAAKGAEAYDRGMEALRAEKPAEARLA 78
Query: 76 FEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135
FE+ + + N Y L+ A + V +A +F + A P+ + A +AA
Sbjct: 79 FEETVKEGNDAYKVLALQQQAGLAVTADKIPDAVRLFDQAAKTSSDPI-LSDPAAFKAAL 137
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
+++DT+ +I L L+E P+H FA E L ++ L+ GK ++A+ F L + P
Sbjct: 138 LIMDTAPLADIEARLTPLAEDKRPLHAFAQEALALARLQHGKTKEAREAFVLLQLGQDVP 197
Query: 196 FGISTRSQMILANIIAS 212
+ R+ + +A I A
Sbjct: 198 DDVRQRANIAVATIDAG 214
>gi|149186033|ref|ZP_01864348.1| hypothetical protein ED21_24906 [Erythrobacter sp. SD-21]
gi|148830594|gb|EDL49030.1| hypothetical protein ED21_24906 [Erythrobacter sp. SD-21]
Length = 259
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 7/191 (3%)
Query: 26 PLLILMILSLAIWF-YLF-DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
PLL ++ L LA + YL+ D E GE L+ + +D A + +
Sbjct: 49 PLLGVVALGLAAFGGYLYWDQQQESTMERSGEELVTILDQLEAGNIDTATGQLDGFDGEG 108
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
+ + + + A I +G+T+ AA +F +VA+D+ AP A+R A ++ +++ D
Sbjct: 109 SPAIS--AKLLRAGIAADEGETQKAATLFGEVADDENAPEALRNLALVRRTALMFDEMGP 166
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
+E+ ++ L+ P P A E++ + L K +A +F E+A+D N+P R++
Sbjct: 167 DEVIAAMKPLAVPGEPFFTSAGELVAHAYLAQDKRAEAGALFAEIARDENTPE--VARAR 224
Query: 204 MI-LANIIASD 213
M+ +A I+ D
Sbjct: 225 MLNMAGILGVD 235
>gi|46201386|ref|ZP_00055151.2| COG2976: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 227
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + G K++ + + L K D+A K+ ++ K Y L+++ A +
Sbjct: 51 WQAWQGWDAKQRQAASARYLETSSLIEQGKKDEAAEVLGKLSAEGPKGYRLLADLRRADM 110
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+ GD AA ++ KVA D R A ++AA + +D + + K ++ L+ ++
Sbjct: 111 ALQAGDAAGAAALYGKVAADTSVDKVYRDMAVIRAAYLTLDGGDFATMEKSVEPLAAEAS 170
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
P A EIL ++ALK G+ +A +F ++A+D +P G+ TR+ +LA A+ QR +
Sbjct: 171 PWRHSAREILALAALKRGETPRAAELFAKIAEDAAAPQGLRTRAAEMLA---ATGQRAR 226
>gi|83945264|ref|ZP_00957613.1| hypothetical protein OA2633_00815 [Oceanicaulis alexandrii
HTCC2633]
gi|83851434|gb|EAP89290.1| hypothetical protein OA2633_00815 [Oceanicaulis alexandrii
HTCC2633]
Length = 253
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
Query: 23 WIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
W+ ++L + + ++ + S +++ + E + A EL+ + L A S F+ ++
Sbjct: 27 WVGGAAAAIVLGVGAYQFM-EWSSKQRADAASEQYQAAAELYEAGNLLQADSQFQALVES 85
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
+ Y L+ M A I +++GD + AA +F + PL +R A QAA D S
Sbjct: 86 GPRGYETLALMRRAEIALSQGDAEEAARLFNRAGEISPEPL-IRDLARYQAALAQFDQLS 144
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
Y++++ L+ L+E + P+ A E++ +AL+ + +A+ ++ L+ + P +S R
Sbjct: 145 YDDLANRLEPLTEGAAPVGLLARELMAAAALRDQRWDEARQRYQLLSVALDLPQAMSQR 203
>gi|158425954|ref|YP_001527246.1| hypothetical protein AZC_4330 [Azorhizobium caulinodans ORS 571]
gi|158332843|dbj|BAF90328.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 238
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
+++ F A++L + K +A ++F + Y L+ A+ L + D
Sbjct: 49 QQREAQATSVRFEAAVKLADEGKHQEAEAAFNALAKDAPAGYRALARFRAATELATR-DK 107
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A F +A D A R A ++AA ILVDT + ++ + +Q L++ ++P+ A
Sbjct: 108 AAAVAAFDTLAADTGLTAAERDLARIRAAMILVDTGAVADVKQRVQALADGTSPLRHSAR 167
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
E++ +S K G ++ A T + +D +P+G+ +R+++I
Sbjct: 168 ELIALSQYKAGDLKGANTTASLILEDQETPYGVRSRAELI 207
>gi|115525348|ref|YP_782259.1| hypothetical protein RPE_3347 [Rhodopseudomonas palustris BisA53]
gi|115519295|gb|ABJ07279.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 217
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
NK +A ++F K+++ Y L+ + +A+ + A+ DT A+ F ++A D P R
Sbjct: 70 NKHAEAEAAFAKLMATAPSGYRTLARLRLAAEIAAR-DTTAGAKAFDEIAADSAVPAVDR 128
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
A L+AA++L++T+SY ++ + L+ + + A E+L +SA + G A+ E
Sbjct: 129 EVAKLRAATLLLETASYPDMVQRLEPSAAATGTFRHSARELLALSAWRTGDAAAARKWLE 188
Query: 187 ELAKDNNSPFGISTR 201
+A D +P + R
Sbjct: 189 LIATDAETPSSLRQR 203
>gi|87198965|ref|YP_496222.1| hypothetical protein Saro_0943 [Novosphingobium aromaticivorans DSM
12444]
gi|87134646|gb|ABD25388.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
12444]
Length = 253
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIV----GENFAQALELFNSNKLDDARSSFE 77
K + +I +L LA W + +E N V GE +AL+ + L A
Sbjct: 48 KPVGAAIIAGLLGLAGWLW-----YENHNNAVAGEQGEVLTKALDQLETRNLKAAADELG 102
Query: 78 KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
+ N+ Y S M A IL +G T AA+ F +A D AP A R AT++ ++
Sbjct: 103 PLAKDGNEGYRATSRMLEAGILAEQGKTAEAAKAFAAIAADGGAPQAYRDLATIREVALD 162
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
D + +++ + L+ L+ P N A E++G++ LK GK A +F ++AK+ P
Sbjct: 163 FDKLAPDKVVERLKPLAVPGNAWFGNAGELVGVAYLKQGKNDLAGALFAQIAKEKTVPDS 222
Query: 198 ISTRSQMILANIIASD 213
+ R++ +A ++ D
Sbjct: 223 LRRRARQ-MAGMLGVD 237
>gi|218507875|ref|ZP_03505753.1| hypothetical protein RetlB5_09820 [Rhizobium etli Brasil 5]
Length = 160
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+A +LI++ + + L+D + + + G+ F A++L + NK D+A ++ +K+ +
Sbjct: 34 VAAILIVVGTAGKV---LYDYWDDTRSSGAGDQFLAAMKLADENKNDEALAALDKLEKEG 90
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
+ Y L+ M A++ KGD A F ++ D+ P AVR AA ++A +L++ SY
Sbjct: 91 HGAYPVLARMRAATVQAQKGDANAAIAAFNEIGKDNGVPAAVRDAARMRAGWLLIENGSY 150
Query: 144 EEISKILQKL 153
E++S ++++
Sbjct: 151 EQVSAAIEEM 160
>gi|326386675|ref|ZP_08208297.1| hypothetical protein Y88_2569 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208990|gb|EGD59785.1| hypothetical protein Y88_2569 [Novosphingobium nitrogenifigens DSM
19370]
Length = 262
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
GE A AL+ + + D AR+S +I + + S + I + + + +AA+ F
Sbjct: 92 GEQMAIALDQVEAGRYDAARTSLAQIAATGGAGFRAASQLVTGGIALDQHKSADAAKAFG 151
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
VA D AP R AT++ + DT +++ L+ L+ P NP A E+LG++ +
Sbjct: 152 AVAADGSAPQVYRDLATVREVAAQFDTMQPQQVVDRLKPLAVPGNPWFGSAGEMLGVAYM 211
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTR 201
K GK +A ++F +AKD + P + R
Sbjct: 212 KMGKNDQAASLFAAIAKDKSVPDSLRGR 239
>gi|260753036|ref|YP_003225929.1| hypothetical protein Za10_0798 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552399|gb|ACV75345.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 254
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 18 KCCYKWIAP-LLILMILSLAIWFYLFDGSHEKKKNIV---GENFAQAL-ELFNSNKLDDA 72
+C IA LL++ + S+ W Y H K+ + G+ A A+ + ++ D
Sbjct: 40 RCITAAIAVILLVVGVGSIGCWSY-----HRHKQEAINSRGDALAAAIAPVIQGGQVKDV 94
Query: 73 RSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132
++ +K+++ ++ +Y L A +L KGD K+A ++ V ND A + ATL
Sbjct: 95 -ATLDKLIASNDPVYANLGRFLKAGVLSDKGDVKSATALYQTVLNDPAAGDILHAVATLH 153
Query: 133 AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
++I +DT E + K LQ L P + A E+ + LK K ++A I++ + D
Sbjct: 154 LSAIELDTVPPENVIKRLQPLVAPGSRWLGSAGEMQAAAYLKENKPEQAVKIYQRIYSDT 213
Query: 193 NSPFGISTRSQMILAN 208
+ P I R++ LAN
Sbjct: 214 SVPEDIRERAKS-LAN 228
>gi|283856260|ref|YP_162184.2| hypothetical protein ZMO0449 [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775255|gb|AAV89073.2| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 254
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 18 KCCYKWIAP-LLILMILSLAIWFYLFDGSHEKKKNIV---GENFAQAL-ELFNSNKLDDA 72
+C IA LL++ + + W Y H K+ + G+ A A+ + ++ D
Sbjct: 40 RCITAAIAVILLVVGVGGIGCWSY-----HRHKQEAINSRGDALAAAIAPVIQGGQVKDV 94
Query: 73 RSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132
++ +K+++ ++ +Y L A IL KGD K+A ++ V ND A + ATL
Sbjct: 95 -ATLDKLIASNDPVYANLGRFLKAGILSDKGDVKSATALYQTVLNDPAAGDILHAVATLH 153
Query: 133 AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
++I +DT E + K LQ L P + A E+ + LK K ++A I++ + D
Sbjct: 154 LSAIELDTVPPENVIKRLQPLVAPGSRWLGSAGEMQAAAYLKENKPEQAVKIYQRIYSDT 213
Query: 193 NSPFGISTRSQMILAN 208
+ P I R++ LAN
Sbjct: 214 SVPEDIRERAKS-LAN 228
>gi|241760998|ref|ZP_04759087.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241374617|gb|EER64078.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 254
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 18 KCCYKWIAP-LLILMILSLAIWFYLFDGSHEKKKNIV---GENFAQAL-ELFNSNKLDDA 72
+C IA LL++ + + W Y H K+ + G+ A A+ + ++ D
Sbjct: 40 RCITAAIAVILLVVGVGGIGCWSY-----HRHKQEAINSRGDALAAAIAPVIQGGQVKDV 94
Query: 73 RSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132
++ +K+++ ++ +Y L A +L KGD K+A ++ V ND A + ATL
Sbjct: 95 -ATLDKLIASNDPVYANLGRFLKAGVLSDKGDVKSATALYQTVLNDPAAGDILHAVATLH 153
Query: 133 AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
++I +DT E + K LQ L P + A E+ + LK K ++A I++ + D
Sbjct: 154 LSAIELDTVPPENVIKRLQPLVAPGSRWLGSAGEMQAAAYLKENKPEQAVKIYQRIYSDT 213
Query: 193 NSPFGISTRSQMILAN 208
+ P I R++ LAN
Sbjct: 214 SVPEDIRERAKS-LAN 228
>gi|90423780|ref|YP_532150.1| hypothetical protein RPC_2277 [Rhodopseudomonas palustris BisB18]
gi|90105794|gb|ABD87831.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 217
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F QA EL NK +A + F K+ + Y L+ + A+ +A D + AA+ + ++A
Sbjct: 60 FNQASELSEQNKHAEAEAVFAKLATTAPAGYRTLARLRNAAE-IATRDPQAAAKAYDEIA 118
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
D P R A ++AA +L++T+SY ++ + L+ + A E+L +SA + G
Sbjct: 119 ADRAVPAVDRDLAKVRAAGLLLETASYSDLLQRLEPATTADGTYRHTARELLALSAWRGG 178
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
A+ E ++ D +P + +R+ ++ A
Sbjct: 179 DATAARKWLELISTDAETPSSLRSRADVLQA 209
>gi|91977475|ref|YP_570134.1| hypothetical protein RPD_3007 [Rhodopseudomonas palustris BisB5]
gi|91683931|gb|ABE40233.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 217
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
NK +A ++F KI + + Y L+ + A+ VA+ D K A +++ +A D P R
Sbjct: 70 NKHAEAEAAFNKIAATTSTGYRTLARLRAAA-EVAQRDPKEAVKLYDAIAADRSVPAQDR 128
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
AT++AA +L+D++ Y ++ + L+ +S + A E+L +SA + V + E
Sbjct: 129 DLATIRAAQLLMDSAGYTDLQQRLEPISGANGAYRHTAREMLALSAWRANNVAATRQWIE 188
Query: 187 ELAKDNNSPFGISTRSQMILA 207
+ D +P + R++++ A
Sbjct: 189 MINTDAETPASLRNRAEVLQA 209
>gi|92117232|ref|YP_576961.1| hypothetical protein Nham_1684 [Nitrobacter hamburgensis X14]
gi|91800126|gb|ABE62501.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 217
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+K G F A L + NK +A ++F K+ + Y LS + A+ V K D K
Sbjct: 51 QKSAEAGSAFEAAATLADQNKYAEAEAAFTKLAATAPPGYRNLSRLRAAAEAV-KRDPKE 109
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
A +++ +A D A R A ++AA +L+DT +Y + + L+ + P A E+
Sbjct: 110 AVKLYDAIAADSGFGSAERDLARVRAAGLLLDTETYNNMLQRLEPATAPQAAFRHTAREL 169
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
L +SA + A+ + + +D +P + +R++ + A
Sbjct: 170 LALSAWRANDTTAARKWLDMIGEDGQTPSSLRSRAEALQA 209
>gi|85373405|ref|YP_457467.1| hypothetical protein ELI_02890 [Erythrobacter litoralis HTCC2594]
gi|84786488|gb|ABC62670.1| hypothetical protein ELI_02890 [Erythrobacter litoralis HTCC2594]
Length = 270
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ +DG E E AL+ + L + E + + DN + M A I
Sbjct: 69 YLWWDGQREAALEQDSEVLVSALDQIEAGNLQTGTETLEPLTTSDNAGAQAAALMLQAGI 128
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+GD AA +F +VAN+ AP A R AT++ ++ D E+ + L ++ P N
Sbjct: 129 AAQQGDLARAATLFGQVANNSDAPPAYRDLATVRQVALQFDRLEPAEVIQRLSAIAVPDN 188
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
A E++ ++ L+ G A +F E+AK +++P + +R++ +A ++ D
Sbjct: 189 AFFGSAGELVAMAHLEKGDRAAAGKLFGEIAKSDDAPQSLRSRARQ-MAGMLGVD 242
>gi|299133683|ref|ZP_07026877.1| Protein of unknown function DUF2133 [Afipia sp. 1NLS2]
gi|298591519|gb|EFI51720.1| Protein of unknown function DUF2133 [Afipia sp. 1NLS2]
Length = 214
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 27 LLILMILSLAIW--FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L++L++ + W + F+ +K G+ F A+ L + + A+++F+KI S +
Sbjct: 31 LIVLIVGGVGGWRAYQYFEN---QKAEAAGKAFEAAVALTDPAQ---AQAAFDKIASSNA 84
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
+ Y+ L+ ++ A+ AK D++ F VAND +R A L+AAS+L+DT+ Y
Sbjct: 85 QGYSTLARLHAAAE-AAKQDSQKGIAAFDAVANDGKVEAPIREIARLRAASLLLDTAPYA 143
Query: 145 EISKILQKLSEPSNPMHQF---ANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
+I K +LS+ ++ H F A E+L +SA + A+ + + D SP
Sbjct: 144 DIEK---RLSDDASGTHTFRHSARELLALSAWRAKNNDAARKWLDMIGDDPQSP 194
>gi|315499683|ref|YP_004088486.1| hypothetical protein Astex_2696 [Asticcacaulis excentricus CB 48]
gi|315417695|gb|ADU14335.1| hypothetical protein Astex_2696 [Asticcacaulis excentricus CB 48]
Length = 243
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 27 LLILMILSLAIWFYL-FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L + +I +L W Y +D S K + E + A E N A++ F+K++
Sbjct: 32 LAVALIGALGFWGYTSWDASRVSKAS---EAYVAAQEALTKNDKAAAKADFQKVVDAGAP 88
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
Y L+ +A + V T A ++ + + PL + ATL+A +++D +S+E+
Sbjct: 89 GYKALALSQLAGLAVEDNKTDEAVKLLEEASKTSSDPL-IADLATLKATFLIMDKASFED 147
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
+ K L L++ P A E L ++ ++ G +Q A+ + LA ++ + R+QM
Sbjct: 148 VEKRLTPLTKEGRPYAPLAKEALAMAKIQKGDIQGARGDLQALAFSLDASDPLKQRAQMA 207
Query: 206 LANI 209
+A I
Sbjct: 208 VALI 211
>gi|85708007|ref|ZP_01039073.1| hypothetical protein NAP1_02190 [Erythrobacter sp. NAP1]
gi|85689541|gb|EAQ29544.1| hypothetical protein NAP1_02190 [Erythrobacter sp. NAP1]
Length = 256
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
L I ++L+ FY +DG +E E AL+ + N + A + ++ + +
Sbjct: 49 LAISLLLAGMFGFYFWDGRNEAALERQSEQIISALDSVDVNDFEGASEKVDGLVDEGSIG 108
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
+ A+ + +G+ A E++ +A D P +R A ++ S D ++
Sbjct: 109 ARTSAKFLQAAAALEEGNPAKAVELYASIAADPETPGPLRNLAVIREVSTNFDERDPADV 168
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
L L+ P NP A E+ I+ L+ G +A +F E+A D P + +R++ +
Sbjct: 169 IAKLSDLAVPGNPYFGSAGELTAIAHLEAGNRDEAGALFAEMANDEALPETLRSRARQ-M 227
Query: 207 ANIIASD 213
A ++ D
Sbjct: 228 AGLLGVD 234
>gi|148255172|ref|YP_001239757.1| hypothetical protein BBta_3774 [Bradyrhizobium sp. BTAi1]
gi|146407345|gb|ABQ35851.1| hypothetical protein BBta_3774 [Bradyrhizobium sp. BTAi1]
Length = 217
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
KK G F +A+EL NK ++A +F ++ + Y L+ + A+ + D
Sbjct: 51 KKAAEAGSAFNKAIELSEQNKREEAEKAFAEVAATAPAGYRMLARFHQAAEAAGR-DKAA 109
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
A ++ ++A D + A L+AA +LVDT+ Y ++ + L+ + P A E+
Sbjct: 110 AVRLYDELAADRSIGAEQQSMARLRAAGLLVDTAPYPDLKQRLEGEAASGAPFRHAAREL 169
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
L +SA K A+ + +A D +P G+ +R++ + A + A
Sbjct: 170 LALSAWKANDAAAARQWLDMIALDGETPPGLRSRAEALQALLPA 213
>gi|300022383|ref|YP_003754994.1| hypothetical protein Hden_0856 [Hyphomicrobium denitrificans ATCC
51888]
gi|299524204|gb|ADJ22673.1| Protein of unknown function DUF2133 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 264
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ G +++ A L ++ K ++A ++F+KI + Y L+ + +A+ L+ G T +A
Sbjct: 57 EQAAGADYSAAETLSDNKKKEEAEAAFKKIAEEGPAGYGSLARLQLAAALLKDGKTADAI 116
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ +A + A ++ A LQAAS+ + + Y EI L ++ P + A E+LG
Sbjct: 117 ATYEALAKESGADNLLKSFAQLQAASLRMPDADYAEIQNRLTPIAGDDAPFSKSARELLG 176
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
++A K GK +A+ E L D N + R +++++ I A++
Sbjct: 177 VAAYKAGKFDEARKYLEPLLIDPNVSEALQERVKILMSGIAAAE 220
>gi|298291069|ref|YP_003693008.1| hypothetical protein Snov_1069 [Starkeya novella DSM 506]
gi|296927580|gb|ADH88389.1| Protein of unknown function DUF2133 [Starkeya novella DSM 506]
Length = 235
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
L +L++L++A W ++ ++ G F AL+L K +A ++F+ +
Sbjct: 31 LAVLIVLAVAGW-RGYEWWKLQRDQAAGAKFEAALQLAADGKAAEAEAAFQALEKDGTSG 89
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEE 145
Y LS A+ L AK D A + +A D ++PL ++ A ++AA +LVDT+ +
Sbjct: 90 YRVLSRFRAATEL-AKTDAAKAVAEYDSLAKDPSISPL-MQNVAQVRAALLLVDTAPLAD 147
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
+ ++ L P A EI+G++ K G + A F + D +P G+ R++++
Sbjct: 148 VEGRMKPLDTPEGAFRHSAREIIGLAQYKAGDFKAATDTFSAILNDGQTPPGLRRRAELM 207
>gi|114328957|ref|YP_746114.1| hypothetical protein GbCGDNIH1_2293 [Granulibacter bethesdensis
CGDNIH1]
gi|114317131|gb|ABI63191.1| hypothetical membrane associated protein [Granulibacter
bethesdensis CGDNIH1]
Length = 227
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 27 LLILMILSLAIWFYLFDGSHEK-----------KKNIVGENFAQALELFNSNKLDDARSS 75
L++L+IL A W H + +N V + A + + K + A ++
Sbjct: 36 LVLLVILGAAGWQGWLWYKHRQDATAAERFLALTRNPV-DPLAPPVHIVPDAKTEQALTA 94
Query: 76 FEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135
F K S +N Y L+ + A++L A G+ K A I+ V+ND+ A A+R ATLQ+
Sbjct: 95 FAKD-SPEN--YATLARLRAAALLTAGGNKKGAEAIYGTVSNDNAALPALRDLATLQSVW 151
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
+D + L L NP FA E + ++ G++ A+ + L++D N+P
Sbjct: 152 NRIDDGDPATLRGQLAPLLADGNPWQPFAREGTALLDIRQGRMDDARRGLQTLSQDENAP 211
Query: 196 FGISTRSQMILA 207
G+ R+ +LA
Sbjct: 212 PGVRNRATGLLA 223
>gi|254503672|ref|ZP_05115823.1| hypothetical protein SADFL11_3711 [Labrenzia alexandrii DFL-11]
gi|222439743|gb|EEE46422.1| hypothetical protein SADFL11_3711 [Labrenzia alexandrii DFL-11]
Length = 225
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
W Y D + G+ F +A+ L + + +A + ++ S Y L+ M A+
Sbjct: 45 WLYWQD----TQSQSAGDTFLEAVSLSEAGQYSEASQLYTELGSSIGG-YPALAQMRQAT 99
Query: 98 ILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
GD A F ++ D +LAP A++ A L+AA I VD+ Y+ I+ ++ L+
Sbjct: 100 DKANAGDATAALAEFDALSRDSNLAP-ALQNVAALRAAYIAVDSEPYDAIADRIESLTGD 158
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
++ A E+L +SA K G + A T L D +P I R ++
Sbjct: 159 TDAFRAAARELLALSAWKNGDAETALTWITALEDDAETPQDIRQRVTLL 207
>gi|114569752|ref|YP_756432.1| hypothetical protein Mmar10_1201 [Maricaulis maris MCS10]
gi|114340214|gb|ABI65494.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 261
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 30 LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNP 89
L +++ ++ + FD + + F A+ S +L A + E + Y
Sbjct: 33 LAVIAGSVAWQSFDAWQTGGRQTASDAFIAAMTHSESGELALAAAGLETLAENGTPGYVS 92
Query: 90 LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKI 149
L+ + ++ + +GD A F + A PL +R A ++A D+ S+ +I
Sbjct: 93 LALIQRGNVAIEQGDNAAATGFFEQAAAQASDPL-LRDMAEIRAVWSSWDSLSFSDIDLR 151
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
L +L +P A E + +AL+ +++A+T ++ L+ +++P G+ R+Q +A I
Sbjct: 152 LSRLVNADSPYRHIARETIAAAALRADNIERARTQYQFLSFSSDAPAGVQRRAQEAMALI 211
>gi|254440175|ref|ZP_05053669.1| hypothetical protein OA307_5045 [Octadecabacter antarcticus 307]
gi|198255621|gb|EDY79935.1| hypothetical protein OA307_5045 [Octadecabacter antarcticus 307]
Length = 229
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 12/191 (6%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WIA L++LMI+ + E VG+ ALE +DD + +
Sbjct: 27 YGWIAVLVVLMIVGGTAFSEFRKAQSEGAAQAVGDEILVALE------IDDDQGRAAALQ 80
Query: 81 SQDNKLYNP---LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
+ D + P ++ + A+ L D AA VA D P R A L++ I
Sbjct: 81 AID--VIGPAAAVTGLLTAANLTEIDDISGAAGALDAVALDADIPQVYRDLAALKSVMIK 138
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
DT S E+ +L L+ P A E L + +++ G + A T F LA+D + G
Sbjct: 139 GDTLSIEDRRTMLADLAVAGAPFRVVAQEQLALISVEAGDIDTAVTQFAALAQDAEATRG 198
Query: 198 ISTRS-QMILA 207
+ R+ MI+A
Sbjct: 199 LRERAFSMIVA 209
>gi|220924492|ref|YP_002499794.1| hypothetical protein Mnod_4624 [Methylobacterium nodulans ORS 2060]
gi|219949099|gb|ACL59491.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 236
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 27 LLILMILSLAIWFYLFDGSHEKK--KNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
+ +L++L + W + HE++ F +A+ +K DA +FE + +
Sbjct: 33 IAVLVVLGIGGWRFW---QHEQQVQAEAASRRFDEAVRT-AKDKGADAAKTFEAVAADAP 88
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y + A+ K + A+ + +A+D+ +R A L+ A + +D E
Sbjct: 89 GGYR-VLARLRAAAEAGKVEPAAGAKAYAAIADDNAVGQGLRDVARLRGALLRLDADDPE 147
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
++ LQ L+ P+N A E+LG+SAL+ G A F+++A D +P G+ R ++
Sbjct: 148 ALN-TLQGLATPTNAFRHTAREMLGLSALRKGDFDGAGRWFDQIAADRETPQGLRQRLEV 206
Query: 205 ILA 207
+A
Sbjct: 207 YIA 209
>gi|27379161|ref|NP_770690.1| hypothetical protein blr4050 [Bradyrhizobium japonicum USDA 110]
gi|27352311|dbj|BAC49315.1| blr4050 [Bradyrhizobium japonicum USDA 110]
Length = 217
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+EL +K +A ++F ++ ++ Y L+ + A+ ++ D K AA+++ +A D
Sbjct: 64 VELSEQDKHAEAETAFTELAAKAPSGYRTLARLRAAAEAASR-DPKAAAKMYDDIAADRG 122
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+ A ++AA +LVD++SY ++ + L+ + P + A E+L +SA +
Sbjct: 123 VGGEWQDLAKIRAAGLLVDSASYADMQQRLEASATPKSTFRHSARELLALSAWRNNDTTA 182
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILA 207
A+ + +A+D +P G+ +R++ + A
Sbjct: 183 ARKWLDAIAEDGETPPGLRSRAEALQA 209
>gi|316933669|ref|YP_004108651.1| hypothetical protein Rpdx1_2327 [Rhodopseudomonas palustris DX-1]
gi|315601383|gb|ADU43918.1| Protein of unknown function DUF2133 [Rhodopseudomonas palustris
DX-1]
Length = 218
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
NK +A ++F+KI + Y L+ + A+ VA D A + + ++A D P R
Sbjct: 70 NKHAEAEAAFDKIAASAPSGYRMLARLRAAA-EVATRDPALAVKRYDEIAADRRLPAPYR 128
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
A ++AA +++DT++Y ++ + L+ ++ + A E+L +SA + V + +
Sbjct: 129 DLAGIRAAGLVMDTANYNDLVQRLEPIATADSAFRHTARELLALSAWRANNVAATRQWID 188
Query: 187 ELAKDNNSPFGISTRSQMILA 207
++ D +P + +R+ ++ A
Sbjct: 189 KITTDAETPGSLRSRADVLQA 209
>gi|209964705|ref|YP_002297620.1| hypothetical protein RC1_1403 [Rhodospirillum centenum SW]
gi|209958171|gb|ACI98807.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 219
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
W ++++ +G AQAL S +A ++ + + L+ Y A
Sbjct: 45 WQRWQSARNQEQTAELGRALAQALPAGASAPATNAADLLAGAAARTDGAHAALARFYEAG 104
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
+ +GD + A ++ ++A + P+ R A L A VD+ +++ L L
Sbjct: 105 LRARQGDREGAVALYDQLAGTEADPV-FRDLAQLLAVLHQVDSGDPKQLLSRLTPLMGSD 163
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
NP + A E+ G+ + + G +A+ +F +LA D +P G+ R+
Sbjct: 164 NPWNWSARELAGLLSARDGDTARARELFSQLADDPQTPAGVRARA 208
>gi|328544036|ref|YP_004304145.1| hypothetical protein SL003B_2418 [polymorphum gilvum SL003B-26A1]
gi|326413780|gb|ADZ70843.1| hypothetical protein SL003B_2418 [Polymorphum gilvum SL003B-26A1]
Length = 229
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Query: 23 WIAPLLILMILSLAI---WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI 79
WI L ++++ W Y + K G+ F +A+ L S + +A+ F ++
Sbjct: 27 WIIVLAVVIVAGTGGYRGWSYW----QQTKAREAGDMFLRAVALAESGQHLEAQELFGRL 82
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ Y L+ + A+ L G+ + A F +A D +R A+L+A + +D
Sbjct: 83 ETATGG-YPVLARLRGATDLAVAGNPEEAIARFDAIAADRSVDSLMRDLASLRAGYLALD 141
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ + + L+ ++ +NP A EIL SA K G A+ + + D +P +S
Sbjct: 142 SLDHAAVQDRLEGVAGDANPWRFAAREILAFSAWKAGDTAAARDWIDRIVDDAAAPADVS 201
Query: 200 TRSQMI 205
R ++
Sbjct: 202 GRVGIL 207
>gi|146340693|ref|YP_001205741.1| hypothetical protein BRADO3744 [Bradyrhizobium sp. ORS278]
gi|146193499|emb|CAL77515.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 217
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F +ALEL NK +A +F + + Y L+ + A+ + D A +++ +A
Sbjct: 60 FNKALELSEQNKHAEAEKAFADVAATAPSGYRMLARFHQAAEAAVR-DKAAAVKLYDDLA 118
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
D + A L+AA +LVDT+ Y ++ L+ + P A E+L +SA K
Sbjct: 119 ADRGIGAEQQSMARLRAAGLLVDTAPYADLKPRLEGETAAGAPFRHAARELLALSAWKAN 178
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
A+ + +A D +P G+ +R++ + A
Sbjct: 179 DAAAARQWLDMIALDGETPPGLRSRAEALQA 209
>gi|39936160|ref|NP_948436.1| hypothetical protein RPA3097 [Rhodopseudomonas palustris CGA009]
gi|39650015|emb|CAE28538.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 229
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
NK +A ++F+KI + Y L+ + A+ + + D + A + + ++A D R
Sbjct: 81 NKHAEAEAAFDKIAASAPAGYRTLARLRAAAEIGTR-DAQAAVKRYDEIAADRSLAAPFR 139
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
A+++AA+++++T+SY ++ + L+ ++ + A E+L +SA + V + +
Sbjct: 140 ELASIRAANLVLETASYNDLVQRLEPVASGNGAFRHTARELLALSAWRANNVAATRQWID 199
Query: 187 ELAKDNNSPFGISTRSQMILA 207
++ D +P + +R+ ++ A
Sbjct: 200 KITTDAETPGSLRSRADVLQA 220
>gi|192291878|ref|YP_001992483.1| hypothetical protein Rpal_3507 [Rhodopseudomonas palustris TIE-1]
gi|192285627|gb|ACF02008.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 218
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
NK +A ++F+KI + Y L+ + A+ + + D + A + + ++A D R
Sbjct: 70 NKHAEAEAAFDKIAASAPAGYRTLARLRAAAEIGTR-DAQAAVKRYDEIAADRSLAAPFR 128
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
A+++AA+++++T+SY ++ + L+ ++ + A E+L +SA + V + +
Sbjct: 129 ELASIRAANLVLETASYNDLVQRLEPVASGNGAFRHTARELLALSAWRANNVAATRQWID 188
Query: 187 ELAKDNNSPFGISTRSQMILA 207
++ D +P + +R+ ++ A
Sbjct: 189 KITTDAETPGSLRSRADVLQA 209
>gi|85716389|ref|ZP_01047361.1| hypothetical protein NB311A_02311 [Nitrobacter sp. Nb-311A]
gi|85696746|gb|EAQ34632.1| hypothetical protein NB311A_02311 [Nitrobacter sp. Nb-311A]
Length = 217
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Query: 24 IAPLLILMILSLAIWF---YLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
I +IL+I ++ W YL +K F A L NK +A ++F K+
Sbjct: 28 IVAAVILVIAAVGGWRGYQYL----QTQKAAEASSTFEAAAALAAQNKHAEAEAAFTKLA 83
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
Y LS + A+ DT A +++ +A+D A R A + AA +LVDT
Sbjct: 84 ETAPSGYRTLSRLRAAAEAARH-DTNAAVKLYDAIASDSGLSSAERDLARVSAARLLVDT 142
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+Y + L+ + P A E+L +SA G A+ + +++D +P +
Sbjct: 143 ETYNNMLPRLEPATAPEATYRHTARELLALSAWSNGDTTAARKWLDMISEDGQTPSSLRR 202
Query: 201 RSQMILA 207
R++ + A
Sbjct: 203 RAEALQA 209
>gi|258542807|ref|YP_003188240.1| hypothetical protein APA01_17320 [Acetobacter pasteurianus IFO
3283-01]
gi|256633885|dbj|BAH99860.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636944|dbj|BAI02913.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639997|dbj|BAI05959.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643053|dbj|BAI09008.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646108|dbj|BAI12056.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256649161|dbj|BAI15102.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256652148|dbj|BAI18082.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655205|dbj|BAI21132.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 231
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 74 SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
+S +K+ S D K L+ + + A+GD K A + V D A A+R ATL
Sbjct: 91 ASLQKLASSDAKGVAVLARLQEGGVQAARGDVKGALAAWDAVQKDPNADSALRDLATLLW 150
Query: 134 ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
+DT + L L+ P + A E L + ++ G V +A+ F L +
Sbjct: 151 CQKQLDTGEPATLRSRLALLTGKGKPWNGLAMEALAVLDVREGHVAEARQKFAALQAAQD 210
Query: 194 SPFGISTRSQMIL 206
P G+ R+Q ++
Sbjct: 211 VPQGVRNRAQDMM 223
>gi|162149031|ref|YP_001603492.1| hypothetical protein GDI_3261 [Gluconacetobacter diazotrophicus PAl
5]
gi|209545220|ref|YP_002277449.1| hypothetical protein Gdia_3104 [Gluconacetobacter diazotrophicus
PAl 5]
gi|161787608|emb|CAP57204.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209532897|gb|ACI52834.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 229
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 90 LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKI 149
L+ + A++L + GDT+ A ++ +VA+D A +R A+L +D +
Sbjct: 105 LARLERAALLASSGDTRGALSLWTQVADDGAADPQLRSLASLLWVQRQIDDGDPATLRSR 164
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
L L P A E + L+ G+ A+ F +L+ + + P G+ +R+ +L +
Sbjct: 165 LTTLDGVGKPWRALAIECEAMLDLRQGRTADARRRFAQLSAEADVPDGLRSRAGGLLQTL 224
Query: 210 IAS 212
AS
Sbjct: 225 NAS 227
>gi|16125898|ref|NP_420462.1| hypothetical protein CC_1652 [Caulobacter crescentus CB15]
gi|221234661|ref|YP_002517097.1| hypothetical protein CCNA_01724 [Caulobacter crescentus NA1000]
gi|13423058|gb|AAK23630.1| hypothetical protein CC_1652 [Caulobacter crescentus CB15]
gi|220963833|gb|ACL95189.1| hypothetical membrane associated protein [Caulobacter crescentus
NA1000]
Length = 250
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ + AL+ + A + F+ + + K Y L+ M + +I + + T+ A F +
Sbjct: 58 QAYQAALQTAQTQGPAKAFAGFKAVADTNAKGYKSLALMQMGAIRLEEKKTQEAVGYFDE 117
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A +P+ + A L++A L+DT+SY++I L L+ +P +A E L + L+
Sbjct: 118 AAKVAPSPM-IGDLARLKSAFALMDTASYKDIETRLTPLAGEKSPYRVYAKEALAFAKLQ 176
Query: 175 FGKVQKAKTIFEELAK--DNNSPFGISTRSQMIL 206
G + A++ F LA D N+ I R+Q +
Sbjct: 177 AGDLAGARSEFVILANSLDANTSEAIRQRAQAAM 210
>gi|257092260|ref|YP_003165901.1| tetratricopeptide repeat-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044784|gb|ACV33972.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 412
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G+ A + +N+LDDARS +E++L D + + L + +A I +G T+ A +I+L
Sbjct: 227 GQAIEHAYDALQANRLDDARSGYEQVLRGDPRNADAL--LGLAVIATRQGQTERAQQIYL 284
Query: 114 KVANDDLAPLAVRYAATLQAASILV----DTSSYEEISKILQKLSEPSNPMHQFA 164
+V D A + T QAA I + D+ E KIL S+P +P FA
Sbjct: 285 RVLEADPANV------TAQAALINLRGHSDSGQSESRLKIL-LASQPDSPSLHFA 332
>gi|163853440|ref|YP_001641483.1| hypothetical protein Mext_4042 [Methylobacterium extorquens PA1]
gi|163665045|gb|ABY32412.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 236
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
LQ L+ P+N A E+LG++ALK G ++ A F++++ D +P G+ R ++ A
Sbjct: 155 LQGLAAPTNAFRHTAREMLGLTALKRGDIEGAGRWFDQISTDGETPQGLRQRVEIYQA 212
>gi|240140860|ref|YP_002965340.1| hypothetical protein MexAM1_META1p4432 [Methylobacterium extorquens
AM1]
gi|254563369|ref|YP_003070464.1| hypothetical protein METDI5036 [Methylobacterium extorquens DM4]
gi|240010837|gb|ACS42063.1| hypothetical protein MexAM1_META1p4432 [Methylobacterium extorquens
AM1]
gi|254270647|emb|CAX26651.1| hypothetical protein METDI5036 [Methylobacterium extorquens DM4]
Length = 236
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
LQ L+ P+N A E+LG++ALK G ++ A F++++ D +P G+ R ++ A
Sbjct: 155 LQGLAAPTNAFRHTAREMLGLTALKRGDIEGAGRWFDQISADGETPQGLRQRVEIYQA 212
>gi|218532300|ref|YP_002423116.1| hypothetical protein Mchl_4412 [Methylobacterium chloromethanicum
CM4]
gi|218524603|gb|ACK85188.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 236
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
LQ L+ P+N A E+LG++ALK G ++ A F++++ D +P G+ R ++ A
Sbjct: 155 LQGLAAPTNAFRHTAREMLGLTALKRGDIEGAGRWFDQISADGETPQGLRQRVEIYQA 212
>gi|144898967|emb|CAM75831.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 227
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F +A ++ + + + +++ Y LS + +A + +A GD AA ++ ++
Sbjct: 68 RFTEASQMLDKGDKAKGTEALQALVASGPSGYKLLSELKLAQVKLADGDAAAAAALYDRI 127
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
A D R A L++A I ++T + K + L+ S A EIL + ALK
Sbjct: 128 AADGGVDDIYRDMAVLKSAYIKLETGDIALVEKSVAPLAVESGAWRHSAREILALLALKA 187
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
G KA + ++A D +P GI R+ +LA +
Sbjct: 188 GDNAKAMDLLRKVADDVAAPAGIRGRAAELLAAL 221
>gi|114799082|ref|YP_759500.1| hypothetical protein HNE_0772 [Hyphomonas neptunium ATCC 15444]
gi|114739256|gb|ABI77381.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 238
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 31 MILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL 90
+I+ +A+ ++ E+++ + + ++A ++F KI+++D KL PL
Sbjct: 35 LIIGVAVNEFVLKPQAEQRRQERALALESGIRALEDARYEEAEAAFTKIMNEDPKL-APL 93
Query: 91 SNMYIASI-LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKI 149
+ ++A GD AAE+ V + P A L++A DT S EE+
Sbjct: 94 AAHFLAQTKYEGGGDAAAAAELLASVGGTEGGPY--ERLALLKSAYFKADTQSLEELELS 151
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
L L+ + + A E++ A + G +A+T + L D +P G+ R+++ LA I
Sbjct: 152 LGSLANDDSTVGALARELIAAKAFEAGDFARARTAYNRLRLDAFAPQGLVRRAEIALAAI 211
>gi|188583712|ref|YP_001927157.1| hypothetical protein Mpop_4524 [Methylobacterium populi BJ001]
gi|179347210|gb|ACB82622.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 237
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
LQ L+ P+N A E+LG++ALK G ++ A F++++ D +P G+ R ++
Sbjct: 155 LQGLAAPTNAFRHTAREMLGLTALKRGDIEGAGRWFDQISADAETPQGLRQRVEV 209
>gi|170750286|ref|YP_001756546.1| hypothetical protein Mrad2831_3889 [Methylobacterium radiotolerans
JCM 2831]
gi|170656808|gb|ACB25863.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 236
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
I L +L++ +A W Y + + F A L K+ +A +FE + +Q
Sbjct: 31 IIALAVLVVAGVAGWRY-WQAQQRAAAEVASVRFDDANRLAKDGKVAEADKAFETLEAQG 89
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y L+ + A+ K D A F K+A+D +R A L+AA + +D +
Sbjct: 90 PAGYRLLAR-FRAAAETGKRDPAAGAAEFDKLADDTGLGDGLRDLARLRAALLRLDGPNP 148
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
+ LQ L+ P A E+LG++ALK G + A F+++ D ++P + R +
Sbjct: 149 DPALANLQGLAA-GTPFRHTAREMLGLAALKKGDYEDASRWFDQIVADPDTPRNLRERIE 207
Query: 204 MILANIIAS 212
+ A I+A
Sbjct: 208 -VYAAIVAG 215
>gi|288958552|ref|YP_003448893.1| hypothetical protein AZL_017110 [Azospirillum sp. B510]
gi|288910860|dbj|BAI72349.1| hypothetical protein AZL_017110 [Azospirillum sp. B510]
Length = 214
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP 159
+ +G +AA ++ +A P+ R ATL A +++ L L+ ++P
Sbjct: 102 IRQGKPADAATVYDGIAGHGSVPVEYRDLATLLAVMQRAGDGDAAQLTAKLLPLTAETSP 161
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
A E+ + A + G +KA+T++++LA D +P G+ R+
Sbjct: 162 WRFTARELTAMLAARSGDTEKARTLYKQLADDQLAPSGVRGRA 204
>gi|163797495|ref|ZP_02191446.1| hypothetical protein BAL199_23462 [alpha proteobacterium BAL199]
gi|159177244|gb|EDP61803.1| hypothetical protein BAL199_23462 [alpha proteobacterium BAL199]
Length = 212
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
K +G+ + A EL S D +F + Y L+ + A+ L GDT+ A
Sbjct: 53 KAEMGDRYEAAAELVVSGNPKDGAQAFAALADDAGAGYATLARLREAAALATAGDTEAAI 112
Query: 110 EIFLKVANDDLAPLAVRYA--ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
+F KVA D P YA A L+A + + T + L + NP A E
Sbjct: 113 LVFRKVATDAKPP----YADLARLRAVRLGIGTGDTSALLSELAPVLAAGNPWRPLAAET 168
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTR-SQMILA 207
L+ G+ KA TI++ LA D ++P + R ++M+ A
Sbjct: 169 EAAIHLRAGETGKALTIYKSLADDASTPSQLRARAAEMVRA 209
>gi|295689709|ref|YP_003593402.1| hypothetical protein Cseg_2324 [Caulobacter segnis ATCC 21756]
gi|295431612|gb|ADG10784.1| Protein of unknown function DUF2133 [Caulobacter segnis ATCC 21756]
Length = 249
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E + ALE + A F+ + + Y L+ + + I + + TK A F +
Sbjct: 58 EAYQAALETAQTAGPAKAFGQFKAVADGGARGYKALALLQMGDIRIEENKTKEAVAYFDE 117
Query: 115 VANDDLAPLAV-RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
A AP A+ A L++A L+DT+SY++I L L+ +P +A E L + L
Sbjct: 118 AAK--AAPDAILGDLARLKSAFALMDTASYKDIESRLTPLAGEKSPYRVYAKEALAFAKL 175
Query: 174 KFGKVQKAKTIFEELAKD-NNSPFGISTRSQMIL 206
+ G V A+ F LA +N+ + R+Q +
Sbjct: 176 QAGDVAGARGDFVVLANSLDNTSEEVRQRAQAAM 209
>gi|83952355|ref|ZP_00961086.1| hypothetical protein ISM_09396 [Roseovarius nubinhibens ISM]
gi|83836028|gb|EAP75326.1| hypothetical protein ISM_09396 [Roseovarius nubinhibens ISM]
Length = 206
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 16/193 (8%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WIA L +L+++ A + + +G+ ALE D+A + +
Sbjct: 4 YGWIAVLAVLLLVGGAAYNEWRKANERAAAEALGDGILAALE------QDEAEARVTALQ 57
Query: 81 SQDNKLYNPLSNMYIASILVAKG-----DTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135
+ D +P ++ + L+A G D K AE + +A P+ R ATL+AA+
Sbjct: 58 AIDAP--DPSADAVV--TLLAAGESLGSDPKATAEALVALAERGDVPMVYRQIATLKAAA 113
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
I + + E ++L L+ + + A E L ++ G + A T E L D +
Sbjct: 114 IGAEGLAAETRRELLDGLALGTGTIRVLAEEQLAYLDIETGNQEAALTRLEALYVDAEAS 173
Query: 196 FGISTR-SQMILA 207
G+ R Q++LA
Sbjct: 174 EGLRQRVGQIVLA 186
>gi|302383645|ref|YP_003819468.1| hypothetical protein Bresu_2537 [Brevundimonas subvibrioides ATCC
15264]
gi|302194273|gb|ADL01845.1| Protein of unknown function DUF2133 [Brevundimonas subvibrioides
ATCC 15264]
Length = 267
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL---AVRYAATLQAASILVDT 140
N Y L+ A + V +A ++F A D P+ RY A L +L+D
Sbjct: 87 NGAYKALALQQRAGLAVQANRIPDAIKLFDDAAKADSDPMLADPARYKAAL----LLMDN 142
Query: 141 S-SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ ++ L L+E PM FA E LG++ L+F K +A+ F L + P +
Sbjct: 143 GGTLADLEARLLPLTEDDRPMRPFAQEALGLTRLQFNKPAEAREQFVLLTLGQDVPESVR 202
Query: 200 TRSQMILANIIAS 212
R+Q ++ I A
Sbjct: 203 QRAQAAISMIDAG 215
>gi|302779944|ref|XP_002971747.1| hypothetical protein SELMODRAFT_95641 [Selaginella moellendorffii]
gi|300160879|gb|EFJ27496.1| hypothetical protein SELMODRAFT_95641 [Selaginella moellendorffii]
Length = 288
Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
IVG E L D+R FE++ ++ + L + Y A G + A EI
Sbjct: 56 IVGTEVITMYE--KCGSLRDSRLVFERMPQKNLVTWTTLISSY------AHGHGREAMEI 107
Query: 112 FLKV-ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
F ++ A+ L P AV + L A S + ++ +I+ SN + +NE L
Sbjct: 108 FERLLAHGGLEPDAVACVSALDACSSMASLEQGRKVHRIVVSRGFESNTVFA-SNEALCH 166
Query: 171 SAL----KFGKVQKAKTIFEELAKDN 192
S + K G+V+ + IFE++A N
Sbjct: 167 SLMTMYSKLGRVESVREIFEKMASKN 192
>gi|154246484|ref|YP_001417442.1| hypothetical protein Xaut_2543 [Xanthobacter autotrophicus Py2]
gi|154160569|gb|ABS67785.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
Length = 237
Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P VR A L+AA ILVDT+ E+ + + ++ + P+ A E L ++ LK G A
Sbjct: 124 PSLVRELAQLRAALILVDTAGLAEVKQRVAAIAAGTGPLRNAAREALALAELKAGDAAAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMI 205
E+ D+ +P G+ +R+++I
Sbjct: 184 NKTATEITSDSETPPGVRSRAELI 207
>gi|94495670|ref|ZP_01302250.1| hypothetical protein SKA58_06460 [Sphingomonas sp. SKA58]
gi|94425058|gb|EAT10079.1| hypothetical protein SKA58_06460 [Sphingomonas sp. SKA58]
Length = 232
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 4/189 (2%)
Query: 27 LLILMILSLAIWF-YLFDGSHEKKKN-IVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L++++++ LA + +L+ H+K ++ V E L+ D + +
Sbjct: 35 LIVVLVVGLAAFGGWLYWQHHQKTQSEAVSEQMDTLLDTAVGGGTPDPKQ-LAALTKASQ 93
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y + + A + KGD K A + +A DD R A ++ S+ D+ E
Sbjct: 94 PGYRASALLVQAGVAARKGDAKAAIAAYRAIAADDSLDQPYRDLALIRQTSLEFDSLKPE 153
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
++ L+ L+ P A E++ ++ +K GK A +F +AKD+ P I +R++
Sbjct: 154 QVVDRLKPLAVEGAPWFGSAGELVAVAYMKMGKNDLAGPMFAAMAKDDKVPQSIRSRARQ 213
Query: 205 ILANIIASD 213
+A ++ D
Sbjct: 214 -MAGVMGID 221
>gi|148556029|ref|YP_001263611.1| hypothetical protein Swit_3124 [Sphingomonas wittichii RW1]
gi|148501219|gb|ABQ69473.1| Uncharacterized protein [Sphingomonas wittichii RW1]
Length = 235
Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 75/164 (45%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
F + + EKK GE + + +++ +A + ++++ Y + + A++
Sbjct: 49 FLYWRQASEKKAEAQGEQMSALIADVQASRKAEAAKKIDTLVAEGGDGYRIAALLTKATL 108
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+GDTK+A I+ +A D+ A R + ++ + D + +++ L+ L+ N
Sbjct: 109 AADRGDTKSAIGIYAGIAADEKAAQPYRDVSLIRQTLLEYDGLTPQQVIDRLKPLAVEGN 168
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
A E+ ++ ++ + +A + +A+D P + TR+
Sbjct: 169 AFFGTAGEMTAVAMIQANRGAEAGRLLAAVARDKTVPDTLRTRA 212
>gi|315425421|dbj|BAJ47085.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
Length = 350
Score = 42.4 bits (98), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG-------KV 178
RYA + I+V EE++KI + P+ P+ + NEI IS K +
Sbjct: 184 RYATEGEEQEIIVPRLHGEEVTKIPRAQYRPNWPLEKVENEIQKISDEKLKNRLSRILEF 243
Query: 179 QKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
K + IF +L ++ FGI+ R ++IL+ I +D
Sbjct: 244 AKRRNIFYQLKNRHSPAFGIAYRGKLILS--IGTD 276
>gi|296116362|ref|ZP_06834977.1| hypothetical protein GXY_11204 [Gluconacetobacter hansenii ATCC
23769]
gi|295977062|gb|EFG83825.1| hypothetical protein GXY_11204 [Gluconacetobacter hansenii ATCC
23769]
Length = 220
Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 73 RSSFEKILSQDNKLYNPL---SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
+++ E++ + + PL S M A++LV GDT A ++ +V D A + A
Sbjct: 74 KTALEQLATLEKTARPPLRALSRMERAALLVNSGDTARALALWAQVNADQGADPTISSLA 133
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
L +DT+ + L L P A E + L+ G +A+ E L+
Sbjct: 134 GLLWVQHQIDTADPAMLRSRLALLDGAQQPWRGLALECEALLDLRQGHDDEARRRLERLS 193
Query: 190 KDNNSPFGISTRSQMILANI 209
D N G+ TR+ +L +
Sbjct: 194 MDMNVSDGVRTRADGLLQTL 213
>gi|15644443|ref|NP_229495.1| hypothetical protein TM1695 [Thermotoga maritima MSB8]
gi|4982272|gb|AAD36762.1|AE001810_1 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 357
Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK-GDTKNAAEIFLKVANDDLAP 122
+ N+ D A + E++L D + + +Y S L + G+ + A E+ K+ N
Sbjct: 210 YEMNRKDLAVKTLERLLEIDP---DNIPALYQLSQLYRELGNEEKAREMEEKIMN----- 261
Query: 123 LAVRYAATLQA-ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+Y L+ A +++ Y+E+++ L+K+ E S+P++ A +L + +K G++ KA
Sbjct: 262 CKPKYPTELEPWARVMLKHGRYKEVAEELEKIVE-SSPLNTLARLLLVVPYVKLGQIDKA 320
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+ I +++ + N F + IL ++ +++
Sbjct: 321 REILDDIGQSN---FWYYYGKKEILDELLTEEEKR 352
>gi|94967854|ref|YP_589902.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549904|gb|ABF39828.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 502
Score = 41.6 bits (96), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
+ F SNK DA +FE + D + + A+ L GD K AA++ N +
Sbjct: 262 GMSYFGSNKYADAAKTFEPL--GDRGMQDTSVGYAWATSLARTGDLKKAADVLNHFENSN 319
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQK--LSEPSNPMHQFANEILGISALKFGK 177
L+P A+ L + + + Y+ + QK L +PS P F G++ LK+ K
Sbjct: 320 LSPDAL-----LLVGQLWTEMTDYQHAVSVFQKVLLRDPSLPKAHF---FEGLAYLKWEK 371
Query: 178 VQKAKTIFE-ELA 189
+A + F+ ELA
Sbjct: 372 WNEAASDFQAELA 384
>gi|148270125|ref|YP_001244585.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1]
gi|147735669|gb|ABQ47009.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila
RKU-1]
Length = 357
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK-GDTKNAAEIFLKVANDDLAP 122
+ N+ D A + E++L D + + +Y S L + G+ + A E+ K+ N
Sbjct: 210 YEMNRKDLAVKALERLLEIDP---DNIPALYQLSQLYRELGNEEKAREMEEKIMN----- 261
Query: 123 LAVRYAATLQA-ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+Y L+ A +++ Y+E+++ L+K+ E S+P++ A +L + +K G++ KA
Sbjct: 262 CKPKYPTELEPWARVMLKHGRYKEVAEELEKIVE-SSPLNTLARLLLVVPYVKLGQIDKA 320
Query: 182 KTIFEELAKDN 192
+ I +++ ++N
Sbjct: 321 REILDDIGQNN 331
>gi|217976949|ref|YP_002361096.1| hypothetical protein Msil_0763 [Methylocella silvestris BL2]
gi|217502325|gb|ACK49734.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 328
Score = 41.2 bits (95), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 1/167 (0%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
H + G + AL L K +A + F++I + K Y L+++ +V + D
Sbjct: 49 HLQAAEAAGARYEAALRLSQDGKSAEAEAEFKEIAASGPKGYATLAHLRAVDEIVGR-DP 107
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A + + D + + AA +AA + VD + + L++PS H
Sbjct: 108 AAAIAAYDALGADPTFDQSFKEAAQTRAAVLRVDRDDPKAFEEKYGALAQPSFTYHDTIR 167
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
E+L ++A K + A + + D +P + R++ L + A
Sbjct: 168 ELLALAAFKREDFEAAGRWLDMIVGDPRAPGPLRQRAEAFLGLVQAG 214
>gi|154253926|ref|YP_001414750.1| hypothetical protein Plav_3494 [Parvibaculum lavamentivorans DS-1]
gi|154157876|gb|ABS65093.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
Length = 240
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
Y L+ ++ A +A G+ A ++ +VAN AP VR A ++ +LVDT+SY+++
Sbjct: 90 YAVLARLHEADKRLAAGERDVALAVYGEVANGG-APAIVRGMARIKEGLLLVDTASYDDM 148
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ L + ++P + A E+L ++A++ G+ + A + + +P G+ R+ +I
Sbjct: 149 KARMSPLVDSASPWRENALELLALAAMRDGEWEDANRNAAAIIANQATPAGLRDRAHVIQ 208
Query: 207 A 207
A
Sbjct: 209 A 209
>gi|159896623|ref|YP_001542870.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
23779]
gi|159889662|gb|ABX02742.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus
ATCC 23779]
Length = 1090
Score = 41.2 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A A LF++NKL A ++++L ++ NP+ YIA I A+GDT A E+F+++A
Sbjct: 47 AVATALFHTNKLPQALQLWQELLKRNPD--NPIFTEYIAKIYRAQGDTDQAIELFMQLA 103
>gi|126667425|ref|ZP_01738397.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17]
gi|126628181|gb|EAZ98806.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17]
Length = 809
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA---NDDLAPLAVRYAATLQAASI 136
L+ DN P +++ +A++ + ++ A E L A + + PL QA +
Sbjct: 511 LTTDNPNMQP-AHLALANLYASTDNSDKAVEQLLAAAVITPEVIGPLQ-------QAGQL 562
Query: 137 LVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
S EE+ + L ++E P+ A+ + + ++ G V++A+T+ E +A ++N P
Sbjct: 563 YASNHSVEEVQQWLGTVAETHPPLAPNASLLSALIHIQQGDVEQARTLLEPMANEDN-PI 621
Query: 197 GISTRSQMILANIIASDQ 214
G Q++ A + S Q
Sbjct: 622 GYRAYGQLLAAESVLSAQ 639
>gi|170723582|ref|YP_001751270.1| response regulator receiver protein [Pseudomonas putida W619]
gi|169761585|gb|ACA74901.1| response regulator receiver protein [Pseudomonas putida W619]
Length = 535
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 77 EKILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA 134
+ + Q K + + ++Y +A +LVA+G+TK A + + L+PLAVR A L
Sbjct: 218 QGVYEQALKAFPIMPSLYDGMADVLVAQGETKRAQNMLEEAVR--LSPLAVRRQAAL--G 273
Query: 135 SILVDTSSYEEISKILQK-LSEPSNPMHQFANEILG-ISAL-----KFGKVQKAK----T 183
+ +D +E SK + +++ + ++ A LG + AL FG + + T
Sbjct: 274 KLALDNEDFEGASKAFRHAVNQGQSSRYKDAESNLGLVQALMNKNAGFGLDARTRVEINT 333
Query: 184 IFEELAKDNNSPFGISTRSQMILA 207
+ E+AKDN G+ R++++ A
Sbjct: 334 VLSEVAKDNVEDQGLQVRARLMKA 357
>gi|225444173|ref|XP_002268853.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 853
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ DAR F+++ S+D L+N + N Y V GD NA +F+++ + P +V +A
Sbjct: 198 IHDARYLFDRMPSKDGVLWNVMLNGY-----VKNGDWDNATGVFMEMRRTETNPNSVTFA 252
Query: 129 ATLQ--AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
L A+ I+++ S + ++ E +P+ AN +L + A K G + A+ +F+
Sbjct: 253 CVLSVCASEIMINFGS-QLHGLVVSSGLEMDSPV---ANTLLAMYA-KCGHLFDARRLFD 307
Query: 187 ELAKDN 192
+ K +
Sbjct: 308 MMPKTD 313
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ DAR F+++ S+D L+N + N Y V GD NA +F+++ + P +V +A
Sbjct: 198 IHDARYLFDRMPSKDGVLWNVMLNGY-----VKNGDWDNATGVFMEMRRTETNPNSVTFA 252
Query: 129 ATLQ--AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
L A+ I+++ S + ++ E +P+ AN +L + A K G + A+ +F+
Sbjct: 253 CVLSVCASEIMINFGS-QLHGLVVSSGLEMDSPV---ANTLLAMYA-KCGHLFDARRLFD 307
Query: 187 ELAKDN 192
+ K +
Sbjct: 308 MMPKTD 313
>gi|79369396|ref|NP_176481.2| unknown protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Query: 67 NKLDDARSSFEKILSQDN----KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++LD+A+ FE ++S+D YN L + + V +G E+F +++ L
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG-----MELFREMSQRGLVG 428
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
V Y +Q L + KI +K+ P IL K+GK++KA
Sbjct: 429 NTVTYNTLIQG---LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 183 TIFEELAKDNNSP 195
+FE L K P
Sbjct: 486 VVFEYLQKSKMEP 498
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Query: 67 NKLDDARSSFEKILSQDN----KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++LD+A+ FE ++S+D YN L + + V +G E+F +++ L
Sbjct: 358 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG-----MELFREMSQRGLVG 412
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
V Y +Q L + KI +K+ P IL K+GK++KA
Sbjct: 413 NTVTYNTLIQG---LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 469
Query: 183 TIFEELAKDNNSP 195
+FE L K P
Sbjct: 470 VVFEYLQKSKMEP 482
>gi|118346940|ref|XP_977297.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89288714|gb|EAR86702.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 607
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G+ ++A ++FLK +D++ PL Y +L T Y+E K L K ++P N
Sbjct: 181 GENEDAIKLFLK--SDEIQPLQDIYL-NYSLGLLLFKTQKYQESIKYLLKQNDPQNF--- 234
Query: 163 FANEILGISALKFGKVQKAKTIFEE 187
F N +LG S LK K++++K F +
Sbjct: 235 FTNYLLGQSYLKINKLEESKIYFHQ 259
>gi|75676212|ref|YP_318633.1| hypothetical protein Nwi_2022 [Nitrobacter winogradskyi Nb-255]
gi|74421082|gb|ABA05281.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 217
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ NK +A+++F K+ Y LS + A+ D A +++ +A +
Sbjct: 68 DQNKHAEAQAAFAKLAETAPLGYRNLSRLRAAAEAARH-DINAAVKLYDAIATEGGFSSV 126
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
R A ++AA++LVD+ +Y + + L+ + P A E+L +SA + A+
Sbjct: 127 ERDFARVRAAALLVDSETYNNMLQRLEPAAAPEATFRHSARELLALSAWRSDDATAARKW 186
Query: 185 FEELAKDNNSPFGISTRSQMILA 207
+ +++D+ +P + R++ + A
Sbjct: 187 LDMISEDSQTPSSLRGRAEALQA 209
>gi|294012483|ref|YP_003545943.1| hypothetical protein SJA_C1-24970 [Sphingobium japonicum UT26S]
gi|292675813|dbj|BAI97331.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 232
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 83/192 (43%), Gaps = 3/192 (1%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+WI +I+ + + A W Y + + + V E + + +A+ +K+
Sbjct: 33 RWIVAAVIIGLAAFAGWLY-WQHYTKTQSQAVSEEMDKVIATAVGGGTPEAKE-LDKLTQ 90
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ + + A KGD+K A + +A+D R A ++ ++ +T
Sbjct: 91 ASQPGFRASALLVKAGTAARKGDSKAAIAAYKAMADDASLDRPYRDLALIRQTTLEFETL 150
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+++ L+ L+ P A E++ I+ +K K A +F +AKD + P I +R
Sbjct: 151 QPQQVVDRLKPLAVEGAPWFGSAGELVAIAYMKMRKPDLAGPLFAAMAKDKDVPQSIRSR 210
Query: 202 SQMILANIIASD 213
++ +A ++ D
Sbjct: 211 ARQ-MAGLLGVD 221
>gi|83594416|ref|YP_428168.1| hypothetical protein Rru_A3086 [Rhodospirillum rubrum ATCC 11170]
gi|83577330|gb|ABC23881.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 253
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQA---ASILVDTSSYEEISKILQKLSEPSN 158
+G T A + + + ND A R AA + A L+D + EI +LQ L + +
Sbjct: 115 EGKTDEAIQGYRGLINDSAADPVFRDAARVLAVLHGLTLLDPA---EIGGLLQPLRDGTG 171
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
P A E+ +S+L+ G + A I + D +P G+ R
Sbjct: 172 PWRPLAEELAAVSSLRQGDSKAAIEILRGILGDPQAPRGVRQR 214
>gi|255710787|ref|XP_002551677.1| KLTH0A05060p [Lachancea thermotolerans]
gi|238933054|emb|CAR21235.1| KLTH0A05060p [Lachancea thermotolerans]
Length = 943
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 9/178 (5%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
+F + E + + A L + N + + A S EK+L +N L IA
Sbjct: 498 MFTYAQETQHGNITRGLAVGLAVINYGRKELADSLIEKMLLHENALLRYGGAYTIALAYA 557
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
GD K A + L +A D + VR AA + +L+ Y + +I++ L+E N
Sbjct: 558 GTGDNK-AIKKLLHIAVSD-SDDDVRRAAVIALGFVLI--RDYTTVPRIVELLAESHNAH 613
Query: 161 HQFANEI-LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ LGIS + G +Q A + L KD P ++ MI ++I Q K
Sbjct: 614 VRCGTAFALGISCVGRG-LQAAVDVLMPLTKD---PVDFVRQAAMIALSLILMQQTEK 667
>gi|145534227|ref|XP_001452858.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420557|emb|CAK85461.1| unnamed protein product [Paramecium tetraurelia]
Length = 1113
Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
A L + K A + + K N AV AA L+ A L ++ YEE +K L KL E
Sbjct: 329 ADCLRMQSQYKEAIKSYQKAIN---CEQAVGNAAMLKKAITLFESQQYEECAKDLTKLLE 385
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
++P + A G+S LK +A FE+ K NNS ++
Sbjct: 386 -TDPTNSEAYYFKGLSRLKIKNATEALLCFEQAIKHNNSKKAVT 428
>gi|281412533|ref|YP_003346612.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
RKU-10]
gi|281373636|gb|ADA67198.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
RKU-10]
Length = 357
Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 126 RYAATLQA-ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+Y L+ A +++ Y+E+ + L+K+ E S+P++ A +L + +K G++ KA+ I
Sbjct: 265 KYPTELEPWARVMLKHGRYKEVVEELEKIVE-SSPLNTLARLLLVVPYVKLGQIDKAREI 323
Query: 185 FEELAKDN 192
E++ ++N
Sbjct: 324 LEDIGQNN 331
>gi|225457859|ref|XP_002279149.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 665
Score = 38.9 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ +++LF+ N+L+D+ FE+I D+ L N + + Y G +NA ++F+
Sbjct: 307 SASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSY-----AWHGFGENALQLFVLTL 361
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
++L P + L A SIL+ +I ++ K S+ + A+ ++ + A KFG
Sbjct: 362 RENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVI--VASSLVEMYA-KFG 418
Query: 177 KVQKAKTIFEEL-AKD 191
+ A F ++ A+D
Sbjct: 419 LIDSAMKTFAKIGARD 434
>gi|114762904|ref|ZP_01442336.1| hypothetical protein 1100011001359_R2601_26321 [Pelagibaca
bermudensis HTCC2601]
gi|114544514|gb|EAU47521.1| hypothetical protein R2601_26321 [Roseovarius sp. HTCC2601]
Length = 218
Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 13/192 (6%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WIA LL+++++ A W + +G+ ALE D+A++ +
Sbjct: 27 YGWIAVLLVILLVGGAAWREYSNAQSRSAAQALGDEILAALE------ADEAQARVAALS 80
Query: 81 SQDNKLYNPLSNMYIASIL---VAKGDTKNAAEIFLK-VANDDLAPLAVRYAATLQAASI 136
D P + IA + A+ + AA + L+ VA + P R A+ +A S
Sbjct: 81 EIDAP--TPGAEALIAMLTASEAARAEDMEAAALSLESVAANGEVPEIYREIASYKAMSQ 138
Query: 137 LVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
S +E L+ L+ P P+ A E L + ++ G A+ + +D+ +
Sbjct: 139 AGSGLSIDERRAGLESLAVPGKPLRLLAEEQLALLDIEAGDRLAAEERLRRIVEDSEATA 198
Query: 197 GISTR-SQMILA 207
G+ R SQMI+A
Sbjct: 199 GLRQRASQMIIA 210
>gi|126736008|ref|ZP_01751752.1| hypothetical protein RCCS2_02198 [Roseobacter sp. CCS2]
gi|126714565|gb|EBA11432.1| hypothetical protein RCCS2_02198 [Roseobacter sp. CCS2]
Length = 218
Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 68/186 (36%), Gaps = 7/186 (3%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WI +L+++ A W + G+ ALE + A + E
Sbjct: 27 YGWIGVAAVLLLVGGAAWNEYSNAQARSAAEATGDALMSALEENDPTVRAAAMAQVEG-- 84
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ ++ + A+ GD AA+ V + P R A L+AA + D
Sbjct: 85 ---DGAAAAVTLLLRAATEQEAGDNAAAAQTLNDVTTNPDVPEMYRDVAALKAAMLPSDD 141
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ + L+ LS+P P A E + L G A + E+ +D G+
Sbjct: 142 VAARRAN--LEALSQPGQPFRLLALEQIAYMTLGEGDADGAIAVMREIVEDAGVTRGLRE 199
Query: 201 RSQMIL 206
R Q ++
Sbjct: 200 RVQTLM 205
>gi|229593976|ref|XP_001025860.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|225567179|gb|EAS05615.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 674
Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-V 115
F ++ FN+N +DA+ FEK + + +L + MY+ +I KG + + E+ LK +
Sbjct: 114 FKLGVDQFNTNMHEDAKKFFEKAIELNPQL--GEAYMYLGAISQQKGMIEESKELLLKAI 171
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
DD Y+A + A+ + T+ ++ K +K + P++ +A +LG+ +
Sbjct: 172 QLDDKC-----YSAHMYIANYYLATNQVKKAIKSCEK-ALKIGPINHWAYHVLGMCYYRQ 225
Query: 176 GKVQKAKTIF 185
++KAKT +
Sbjct: 226 QDLEKAKTYY 235
>gi|77460482|ref|YP_349989.1| response regulator receiver domain-containing protein [Pseudomonas
fluorescens Pf0-1]
gi|77384485|gb|ABA75998.1| Response regulator receiver domain protein [Pseudomonas fluorescens
Pf0-1]
Length = 534
Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLKVANDDL 120
LF ++ A+ +EK L K++ + +Y +A +LVA+GDTK A ++ + L
Sbjct: 208 LFKRGQVSQAKGVYEKAL----KVFPMMPALYDGMADVLVAEGDTKGAQQVLEEAIR--L 261
Query: 121 APLAVRYAATL 131
+PLAVR A L
Sbjct: 262 SPLAVRRQALL 272
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA--PLA 124
+LDDAR++FE++ +++ +N + Y G + A E+F ++ + P
Sbjct: 80 GRLDDARAAFEELQWKNSVTWNAMMTNYKLD-----GRDREALELFREMCERSRSARPDK 134
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL----KFGKVQK 180
++ ++A S L D EI ++L++ +H+ + ++G + L K G +++
Sbjct: 135 FSFSIAIEACSNLEDLEQGREIHEMLRR---EGKELHK--DVVVGTALLNMYSKCGDLEE 189
Query: 181 AKTIFEELAKDNNS 194
A+ +F+ + D +S
Sbjct: 190 ARKVFDSIRHDADS 203
>gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2]
gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2]
Length = 357
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK-GDTKNAAEIFLKVANDDLAPLAV 125
N+ D A + E++L D + + +Y S L + G + A E+ K+ N
Sbjct: 213 NRKDLAVKALERLLEIDP---DNIPALYQLSQLYRELGSEEKAREMEEKIMN-----CKP 264
Query: 126 RYAATLQA-ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+Y L+ A +++ Y+E+ + L+K+ E S+P++ A +L + +K G++ KA+ I
Sbjct: 265 KYPTELEPWARVMLKHGRYKEVVEELEKIVE-SSPLNTLARLLLVVPYVKLGQIDKAREI 323
Query: 185 FEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+++ + N F + IL ++ +++
Sbjct: 324 LDDIGQSN---FWYYYGKKEILDELLTEEEKR 352
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 38.5 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ DAR F+++ S+D L+N + N Y V GD NA +F+++ + P +V +A
Sbjct: 198 IHDARYLFDRMPSKDGVLWNVMLNGY-----VKNGDWDNATGVFMEMRRTETNPNSVTFA 252
Query: 129 ATLQ--AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
L A+ I+++ S + L S + FA ++ I K V+ A+ IF
Sbjct: 253 CVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFA--LIDIY-FKCRDVEMARKIF- 308
Query: 187 ELAKDNNSPFGISTRSQMILANIIASDQRN 216
D +P I + MI ++ N
Sbjct: 309 ----DQRTPVDIVVCTAMISGYVLNGMNNN 334
>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
Length = 734
Score = 38.5 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+++AR F+++ S+D + + Y +GD+K A E+F ++ + + P +V ++
Sbjct: 464 MEEARKIFDRMESRDVLTWTVMIKGY-----AQQGDSKAALELFHRMKPEGVEPDSVTFS 518
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF-ANEILGISALKFGKVQKAKTIFEE 187
+ LQA S L D E ++I L+ M F N ++ + A + G ++ A+ IFE
Sbjct: 519 SVLQACSNLED--GREVHARI---LAAQGGKMSDFLGNGLINMYA-RCGSMRDARQIFES 572
Query: 188 LAKDN 192
+ + +
Sbjct: 573 MDRSS 577
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 38.5 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+++AR F+++ S+D + + Y +GD+K A E+F ++ + + P +V ++
Sbjct: 464 MEEARKIFDRMESRDVLTWTVMIKGY-----AQQGDSKAALELFHRMKPEGVEPDSVTFS 518
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF-ANEILGISALKFGKVQKAKTIFEE 187
+ LQA S L D E ++I L+ M F N ++ + A + G ++ A+ IFE
Sbjct: 519 SVLQACSNLED--GREVHARI---LAAQGGKMSDFLGNGLINMYA-RCGSMRDARQIFES 572
Query: 188 LAKDN 192
+ + +
Sbjct: 573 MDRSS 577
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 21/127 (16%)
Query: 89 PLSNMY--IASILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEE 145
P S+ Y + +L+ +G + E++ ++ N+ D P + Y+A + SSYE+
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALI---------SSYEK 245
Query: 146 ISK------ILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+ + + ++ + P + +LGI K GKV+KA +FEE+ + SP +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI-YFKVGKVEKALDLFEEMKRAGCSP-TV 303
Query: 199 STRSQMI 205
T +++I
Sbjct: 304 YTYTELI 310
>gi|313497134|gb|ADR58500.1| Response regulator/TPR domain-containing protein [Pseudomonas
putida BIRD-1]
Length = 577
Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 77 EKILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA 134
+ + Q K + + +Y +A +LVA+GDT+ A + + L+PL+VR +TL
Sbjct: 260 QGVYEQALKAFPIMPGLYDGMAEVLVAQGDTRRAQNLLEEAVR--LSPLSVRRQSTL--G 315
Query: 135 SILVDTSSYEEISKILQK-LSEPSNPMHQFANEILG-ISAL-----KFGKVQKAK----T 183
+ ++ +E SK + +++ + ++ A LG + AL FG + + T
Sbjct: 316 KLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFGLDARTRVEINT 375
Query: 184 IFEELAKDNNSPFGISTRSQMILA 207
E+AK+N G+ R++M+ A
Sbjct: 376 TLSEVAKENPEDQGLQVRARMMKA 399
>gi|26987504|ref|NP_742929.1| response regulator/TPR domain-containing protein [Pseudomonas
putida KT2440]
gi|148546041|ref|YP_001266143.1| response regulator receiver protein [Pseudomonas putida F1]
gi|24982171|gb|AAN66393.1|AE016267_2 response regulator/TPR domain protein [Pseudomonas putida KT2440]
gi|148510099|gb|ABQ76959.1| response regulator receiver protein [Pseudomonas putida F1]
Length = 535
Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 77 EKILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA 134
+ + Q K + + +Y +A +LVA+GDT+ A + + L+PL+VR +TL
Sbjct: 218 QGVYEQALKAFPIMPGLYDGMAEVLVAQGDTRRAQNLLEEAVR--LSPLSVRRQSTL--G 273
Query: 135 SILVDTSSYEEISKILQK-LSEPSNPMHQFANEILG-ISAL-----KFGKVQKAK----T 183
+ ++ +E SK + +++ + ++ A LG + AL FG + + T
Sbjct: 274 KLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFGLDARTRVEINT 333
Query: 184 IFEELAKDNNSPFGISTRSQMILA 207
E+AK+N G+ R++M+ A
Sbjct: 334 TLSEVAKENPEDQGLQVRARMMKA 357
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 38.5 bits (88), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 21/127 (16%)
Query: 89 PLSNMY--IASILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEE 145
P S+ Y + +L+ +G + E++ ++ N+ D P + Y+A + SSYE+
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALI---------SSYEK 245
Query: 146 ISK------ILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+ + + ++ + P + +LGI K GKV+KA +FEE+ + SP +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI-YFKVGKVEKALDLFEEMKRAGCSP-TV 303
Query: 199 STRSQMI 205
T +++I
Sbjct: 304 YTYTELI 310
>gi|15233259|ref|NP_188222.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|75274469|sp|Q9LW84|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 38.5 bits (88), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 21/127 (16%)
Query: 89 PLSNMY--IASILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEE 145
P S+ Y + +L+ +G + E++ ++ N+ D P + Y+A + SSYE+
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALI---------SSYEK 245
Query: 146 ISK------ILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+ + + ++ + P + +LGI K GKV+KA +FEE+ + SP +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI-YFKVGKVEKALDLFEEMKRAGCSP-TV 303
Query: 199 STRSQMI 205
T +++I
Sbjct: 304 YTYTELI 310
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 38.5 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ +++LF+ N+L+D+ FE+I D+ L N + + Y G +NA ++F+
Sbjct: 980 SASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSY-----AWHGFGENALQLFVLTL 1034
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
++L P + L A SIL+ +I ++ K S+ + A+ ++ + A KFG
Sbjct: 1035 RENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVI--VASSLVEMYA-KFG 1091
Query: 177 KVQKAKTIFEEL-AKD 191
+ A F ++ A+D
Sbjct: 1092 LIDSAMKTFAKIGARD 1107
>gi|167031824|ref|YP_001667055.1| response regulator receiver protein [Pseudomonas putida GB-1]
gi|166858312|gb|ABY96719.1| response regulator receiver protein [Pseudomonas putida GB-1]
Length = 535
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 77 EKILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA 134
+ + Q K + + +Y +A +LVA+GDT+ A + + L+PL+VR +TL
Sbjct: 218 QGVYEQALKAFPIMPGLYDGMAEVLVAQGDTRRAQNLLEEAVR--LSPLSVRRQSTL--G 273
Query: 135 SILVDTSSYEEISKILQK-LSEPSNPMHQFANEILG-ISAL-----KFGKVQKAK----T 183
+ ++ +E SK + +++ + ++ A LG + AL FG + + T
Sbjct: 274 KLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFGLDARTRVEINT 333
Query: 184 IFEELAKDNNSPFGISTRSQMILA 207
E+AK+N G+ R++M+ A
Sbjct: 334 TLSEVAKENPEDQGLQVRARMMKA 357
>gi|294086066|ref|YP_003552826.1| hypothetical protein SAR116_2499 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665641|gb|ADE40742.1| hypothetical membrane associated protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 208
Score = 38.5 bits (88), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 20/197 (10%)
Query: 12 GKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN-KLD 70
GK +G C +++ LA+ G H+ + +A +L++++ K D
Sbjct: 25 GKYVIGAC-----------LVVVLAV------GGHQGYGIYSTKQIEKAADLYHTSLKAD 67
Query: 71 DARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAA 129
D SS + + Y L+ IA+ GD A + +A D ++ PL ++A
Sbjct: 68 DVISSLNNNVDELTDGYQMLARFQIAAAEARAGDHAAAQASYSALAEDKNIDPLYQQFAQ 127
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
L + D SS + + L L + A E L+ GKV AKT E++
Sbjct: 128 LLSVMNAPAD-SSVQSLQDRLAPLISAAGTWQGLALEQSAGLDLQTGKVDAAKTKLEQIV 186
Query: 190 KDNNSPFGISTRSQMIL 206
K P + R+Q +L
Sbjct: 187 KLTEIPQSLRQRAQRML 203
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 70 DDARSSFEKILSQ----DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
++A FE++ S+ D YN + +MY G A E++ K+ + + V
Sbjct: 195 EEALKWFERMKSEGIVPDEVTYNSVIDMYGRV-----GRVNEAVELYEKLKSVNWKLDTV 249
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEP-SNPMHQFANEILGISALKFGKVQKAKTI 184
Y A A++ Y+ I +++Q++ + S+P N ++G + K GKV +AK +
Sbjct: 250 TYGAI---ANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLS-KAGKVNQAKKV 305
Query: 185 FEELAKDNNSP 195
F E+ SP
Sbjct: 306 FNEMRTSGVSP 316
>gi|84503433|ref|ZP_01001493.1| hypothetical protein OB2597_03749 [Oceanicola batsensis HTCC2597]
gi|84388220|gb|EAQ01172.1| hypothetical protein OB2597_03749 [Oceanicola batsensis HTCC2597]
Length = 205
Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEK-KKNIVGENFAQALELFNSNKLDDARSSFEKI 79
Y WIA L+IL+I+ A W Y +D S E + G+ ALE + A S+ E
Sbjct: 8 YGWIAVLVILLIVGGAAW-YEYDRSRETAQARAFGDAILAALEQGEPLERATALSAIEAG 66
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ D + + +M A GD + A + VA + L R A +A ++ D
Sbjct: 67 -TPDAR---AVRDMLEAGERSTAGDREGALTLLTGVAENPELQLIYRSLAKFRALALSTD 122
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
E + L+ +P+ A E + ++ ++ G +A
Sbjct: 123 DMGPAERRAEYEDLAGAGSPLRLLAKEQIAVTHIEEGNRDEA 164
>gi|145512886|ref|XP_001442354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409707|emb|CAK74957.1| unnamed protein product [Paramecium tetraurelia]
Length = 1111
Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
A L + K A + + K N AV AA L+ A L ++ YEE +K L KL E
Sbjct: 337 ADCLRMQCQYKEAIKYYQKAIN---CEQAVGNAAILKKAITLYESQQYEECAKDLSKLLE 393
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
++P + A G+S LK +A FE+ K NNS ++
Sbjct: 394 -TDPTNSEAYYFKGLSRLKIKNNTEALLCFEQAIKHNNSKKAVT 436
>gi|307294127|ref|ZP_07573971.1| Protein of unknown function DUF2133 [Sphingobium chlorophenolicum
L-1]
gi|306880278|gb|EFN11495.1| Protein of unknown function DUF2133 [Sphingobium chlorophenolicum
L-1]
Length = 232
Score = 38.1 bits (87), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 82/192 (42%), Gaps = 3/192 (1%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+WI L++ +L + Y + + + V E + + DA+ +K+
Sbjct: 33 RWIVALVVGGLLLFGAFLY-WQHYTKTQSQAVSEEMDKVISTAVGGGTPDAKE-LDKLTQ 90
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ + + A KGD+K A + +A+D R A ++ ++ ++
Sbjct: 91 ASQPGFRASALLVKAGTAARKGDSKAAIAAYKAMADDASLDQPYRDLALIRQTTLEYESL 150
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+++ L+ L+ P A E++ I+ +K K A +F +AKD N P I +R
Sbjct: 151 QPQQVVDRLKPLAVEGAPWFGSAGELVAIAYMKMRKPDLAGPLFAAMAKDKNVPQSIRSR 210
Query: 202 SQMILANIIASD 213
++ +A ++ D
Sbjct: 211 ARQ-MAGLLGVD 221
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 38.1 bits (87), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
L DA+ F++I +D +N L ++YI +G K A E+F ++ L P +V
Sbjct: 202 GSLSDAKRVFDRIAFRDVISWNALMSVYI-----QQGHRKEAFELFKRMDKAGLQPNSVT 256
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
Y + L A SS E++ +I Q+L++ + L + KF ++ + +FE
Sbjct: 257 YLSLLPAC------SSLEQLREIHQELADQGLEQDEQVGNTLITAYNKF-SLEDSVAVFE 309
Query: 187 ELAK 190
+ +
Sbjct: 310 RMKR 313
>gi|254489034|ref|ZP_05102239.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214045903|gb|EEB86541.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 243
Score = 38.1 bits (87), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WIA L I++I+ A W K +G+ AL L ++ A S+ E
Sbjct: 33 YGWIAVLAIVLIVGAAAWNEYQKAQARSKAEALGDAAFAALTLQDTEGRAAALSAVET-- 90
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
D+ + A+ V GD A E +A + P R A L++ ++
Sbjct: 91 --DSPRAAAVLGFLTAAEQVEAGDKSAAIETLNAIAVNGEVPAIYREIAQLKSVTLQGTE 148
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGI 170
+ + L+ L++P N + A E L +
Sbjct: 149 TPVSDRRLALEALAQPGNTLRLLAEEQLAL 178
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 70 DDARSSFEKILSQ----DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
++A FE++ S+ D YN + +MY G A E++ K+ + + V
Sbjct: 195 EEALKWFERMKSEGIVPDEVTYNSVIDMYGRV-----GRVNEAVELYEKLKSVNWKLDTV 249
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEP-SNPMHQFANEILGISALKFGKVQKAKTI 184
Y A A++ Y+ I +++Q++ + S+P N ++G + K GKV +AK +
Sbjct: 250 TYGAI---ANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLS-KAGKVNQAKKV 305
Query: 185 FEELAKDNNSP 195
F E+ SP
Sbjct: 306 FNEMRTSGVSP 316
>gi|70731837|ref|YP_261579.1| response regulator/TPR domain-containing protein [Pseudomonas
fluorescens Pf-5]
gi|68346136|gb|AAY93742.1| response regulator/TPR domain protein [Pseudomonas fluorescens
Pf-5]
Length = 534
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLKVANDDL 120
LF ++ +A++ +EK L K + + +Y +A +LVA+GDT+ A + + L
Sbjct: 208 LFKRGQVGEAKAVYEKAL----KAFPMMPGLYDGLAEVLVAEGDTQRAQNVLEEAVR--L 261
Query: 121 APLAVRYAATL 131
+PLAVR A L
Sbjct: 262 SPLAVRRQALL 272
>gi|222099856|ref|YP_002534424.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
4359]
gi|221572245|gb|ACM23057.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
4359]
Length = 367
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 134 ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
A +++ Y E+++ L+++ E S P++ A +L + +K GK+ KAK + E+L + N
Sbjct: 284 AKVMLKHGKYREVAEELERIVETS-PLNTLAKLLLVVPYVKMGKIDKAKELLEDLEQTN 341
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Query: 67 NKLDDARSSFEKILSQDN----KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++LD+A+ F ++S+D YN L + + V +G E+F +++ L
Sbjct: 375 DRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG-----MELFREMSQRGLVG 429
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
V Y +Q L + KI +K+ P IL K+GK++KA
Sbjct: 430 NTVTYNTLIQG---LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 486
Query: 183 TIFEELAKDNNSP 195
+FE L K P
Sbjct: 487 VVFEYLQKSKMEP 499
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
LD AR FE QD +N + + Y T++A E+F ++ + +AP V +
Sbjct: 618 LDCAREVFETSRRQDTICWNAIISGY-----AQHSQTRDAVELFHRMQQEGVAPDPVTFV 672
Query: 129 ATLQAASI--LVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
L S L+D Y S + L EP+ + ++LG + GK+Q+A+ +
Sbjct: 673 CILSVCSHGGLLDEGVYAYASMVELGL-EPTQDNYACVIDLLG----RAGKLQEAEEFIQ 727
Query: 187 ELA 189
L
Sbjct: 728 SLG 730
>gi|255563078|ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538234|gb|EEF39843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
N ++DA FE+ + +D ++N + Y S+ A + A E+++++ P
Sbjct: 224 MNRGSVEDAEEIFERTVEKDVVVFNAMIEGYSKSVQTA----EKALEVYVEMQRYGFRPN 279
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL-----KFGKV 178
+A+ + A S+L +++ L K +F + SAL K G++
Sbjct: 280 LSTFASVIGACSVLAGFEIGQQVQGQLLK--------REFFTNVKTGSALIDMYSKCGRI 331
Query: 179 QKAKTIFEELAKDN 192
+ A+ FE++ + N
Sbjct: 332 EDARRAFEQMPEKN 345
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 71 DARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-VANDDLAPLAVRYAA 129
+AR F+++ + LYN + MYI AKGD A ++FL+ + + D P Y
Sbjct: 73 NARKLFDELRQRGTLLYNFMIKMYI-----AKGDYFEAMKVFLEMLGSKDCCPDNYTYPF 127
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSN-PMHQFANEILGISALKFGKVQKAKTIFEEL 188
++A S L+ E ++L L+ S H F L + G+V++A+ +F+ +
Sbjct: 128 VIKACSELL----LVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAM 183
Query: 189 AK 190
+
Sbjct: 184 KE 185
>gi|225468708|ref|XP_002270940.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 640
Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 49 KKNIVGENFAQA---LELF---NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
K ++ G NF A LF ++N L ARS F++I S D ++N + Y+ S
Sbjct: 28 KTSLDGNNFVLAKLLRRLFACSSTNDLPYARSVFDEIPSPDTFIWNTMIRAYLNS----- 82
Query: 103 GDTKNAAEIFLKVANDDLAPL-AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+ + + +F ++ + P+ + + +QA L D + +++ + K+ S+
Sbjct: 83 QNPQESMSLFFQMRLQECIPIDSYSLSLVIQACGRLKDLGNGQKLHTQVLKIGLGSD--- 139
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
F L KFG ++ A+ I +E+A + P+ +
Sbjct: 140 LFVETALIEMYAKFGDIEIARKILDEMAHPDLVPYNV 176
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 37.0 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
LD AR FE QD +N + + Y G T++A E+F ++ + + P V +
Sbjct: 658 LDCAREVFETSRRQDIICWNAIISGY-----AQHGQTRDAVELFHRMQQEGVTPDPVTFV 712
Query: 129 ATLQAASI--LVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
L S L+D Y S + L EP+ + ++LG + GK+Q+A+ +
Sbjct: 713 CILSVCSHGGLLDEGVYAYASMVELGL-EPTQDNYACVIDLLG----RAGKLQEAEEFIQ 767
Query: 187 ELA 189
L
Sbjct: 768 SLG 770
>gi|330811248|ref|YP_004355710.1| response regulator, CheY family [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379356|gb|AEA70706.1| Putative response regulator, CheY family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 535
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLKVANDDL 120
+F ++ A++ +EK L K++ + +Y +A +LVA+GDTK A + + L
Sbjct: 208 MFKRGQVGQAKAVYEKAL----KVFPMMPALYDGMADVLVAEGDTKQAQHVLEEAVR--L 261
Query: 121 APLAVRYAATL 131
+PLAVR + L
Sbjct: 262 SPLAVRRQSLL 272
>gi|116329905|ref|YP_799623.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 1197
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
I A+G ++A E++ K+ + P+ +Y + + A IL + +E+ + L+++
Sbjct: 132 IYTAEGKNEDAIEVYGKLES---LPVKDKYNYSFKKAVILKNQGKFEQSYETLKRI---- 184
Query: 158 NPMHQFA-----NEILGISALKFGKVQKAKTIFEELAKDN 192
P +FA N LG +A++ K ++A+ FEE K+N
Sbjct: 185 -PAEEFAFPAQLNMQLGDAAVQLKKYEEAEIYFEEARKNN 223
>gi|116329495|ref|YP_799215.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122239|gb|ABJ80282.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 1197
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
I A+G ++A E++ K+ + P+ +Y + + A IL + +E+ + L+++
Sbjct: 132 IYTAEGKNEDAIEVYGKLES---LPVKDKYNYSFKKAVILKNQGKFEQSYETLKRI---- 184
Query: 158 NPMHQFA-----NEILGISALKFGKVQKAKTIFEELAKDN 192
P +FA N LG +A++ K ++A+ FEE K+N
Sbjct: 185 -PAEEFAFPAQLNMQLGDAAVQLKKYEEAEIYFEEARKNN 223
>gi|169832335|ref|YP_001718317.1| TPR repeat-containing protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169639179|gb|ACA60685.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 209
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ N+LD+AR FEK + ++++ N+ I +GD + AE+ K +L P
Sbjct: 36 MMQQNRLDEAREHFEKAIETGSRMFEAYVNL--GYIYFKEGDMEKVAEVNRKAV--ELEP 91
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
R A L A + + + E + LQK E + + Q N L + L+ G V KA
Sbjct: 92 RYARGYANLGFAYLQMAKTG--EAIEALQKALELNPEIAQAWNN-LANAYLQRGDVDKAI 148
Query: 183 TIFEEL 188
+ E L
Sbjct: 149 EVGERL 154
>gi|154175148|ref|YP_001408029.1| serine protease [Campylobacter curvus 525.92]
gi|153793188|gb|ABS50421.1| serine protease [Campylobacter curvus 525.92]
Length = 134
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
ENF +A EL+ S K ++A + F K + K ++ + + + K D A +IF K
Sbjct: 22 ENFDKAQELYGSKKFEEAYTLFNKACGEGVKKGCTMNAIMLFNGDGVKKDRIQAEQIFTK 81
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
A DD P+A +QA I + EE ++ L K
Sbjct: 82 -ACDDNEPMACAKLGEMQAFGISQNKIKDEEKTRALFK 118
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 13/156 (8%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN 92
L L W F ++ K +I G N A ++DA+ F+++ ++D YN L
Sbjct: 252 LELGNWVVRFLTENQIKLSISGHN-AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTL-- 308
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
S A G A + + + P V + L A S EE K+ +
Sbjct: 309 ---ISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS---HAGLLEEGRKVFES 362
Query: 153 LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ +P+ + ++LG + G+++ AK E +
Sbjct: 363 IKDPAIDHYACMVDLLG----RVGELEDAKRTMERM 394
>gi|255037808|ref|YP_003088429.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254950564|gb|ACT95264.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
18053]
Length = 586
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 23/82 (28%)
Query: 52 IVGENFAQALELFN---------------------SNKLDDARSSFEKILSQDNKLYNPL 90
I GE + +A +LF +++LD+A+ +F+K LS D+K Y L
Sbjct: 34 IRGERYTEAGDLFKKLAEGSPSADNQYYLGYYYIKTDQLDEAQKAFDKGLSLDDKSY--L 91
Query: 91 SNMYIASILVAKGDTKNAAEIF 112
+ + + +I +AKGD A E+F
Sbjct: 92 NKVGLGTIALAKGDRAKAKELF 113
>gi|225456890|ref|XP_002277458.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 698
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
V EN ++ + +D A S F +I D+ YN + + K A +F
Sbjct: 58 VAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGF-----TLKQSPHEAILLF 112
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
++ + + P + L+ S L S E+I ++ K S H F L
Sbjct: 113 KEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGS---HGFVKNTLIHMY 169
Query: 173 LKFGKVQKAKTIFEELAKDN----NSPFGISTRS 202
G+V+ A+ +F+E+++ N NS F T+S
Sbjct: 170 ANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKS 203
>gi|103487686|ref|YP_617247.1| hypothetical protein Sala_2205 [Sphingopyxis alaskensis RB2256]
gi|98977763|gb|ABF53914.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
Length = 253
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+WI ++ ++L+ + Y ++ + + E AL+ +N+ A S EKI +
Sbjct: 33 RWIIGGVLAILLAFGGYLY-WNHRQDVARGEQAEELIAALDKLEANQPRAATSELEKIAA 91
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
Y + M +A++ GD K AA + KVA D ++R A ++ + DT
Sbjct: 92 AGTPAYRAAATMQLANVKAGAGDLKAAAALMAKVAADTQVDRSLRDLALIRQTAFEYDTL 151
Query: 142 SYEEISKILQKLSEPSNPMHQF---ANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
E + ++ + + +P + A E+ + + G+ +A ++ +AK + P +
Sbjct: 152 KPEAVIARMKPIVDARDPASSWFASAAELSASAHYRLGQFDRAGALYGRIAKLPDLPKSL 211
Query: 199 STRSQMILANIIASD 213
+RS + +A ++ D
Sbjct: 212 QSRS-VQMAGMLGVD 225
>gi|297733701|emb|CBI14948.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
V EN ++ + +D A S F +I D+ YN + + K A +F
Sbjct: 58 VAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGF-----TLKQSPHEAILLF 112
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
++ + + P + L+ S L S E+I ++ K S H F L
Sbjct: 113 KEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGS---HGFVKNTLIHMY 169
Query: 173 LKFGKVQKAKTIFEELAKDN----NSPFGISTRS 202
G+V+ A+ +F+E+++ N NS F T+S
Sbjct: 170 ANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKS 203
>gi|302828766|ref|XP_002945950.1| hypothetical protein VOLCADRAFT_78980 [Volvox carteri f.
nagariensis]
gi|300268765|gb|EFJ52945.1| hypothetical protein VOLCADRAFT_78980 [Volvox carteri f.
nagariensis]
Length = 1321
Score = 36.2 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 16/106 (15%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
LF+ ++LD+A + FE+ + QD+ L + A IL K A ++ LA
Sbjct: 164 LFDESELDEAYTQFEQAVEQDHSDLQAL--LGKAKILELKKQMAQAVDV--------LAE 213
Query: 123 LAVRYA----ATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQ 162
+ VR+A A ++ A +L+ +E++++ LQ++ S+ N M Q
Sbjct: 214 INVRFAWFVPALVEKARLLMVLGDWEQVTETLQRVLSSDAQNIMAQ 259
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 36.2 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
S +L+DA FE+I + + L + Y + G + A ++F K+ + P +
Sbjct: 159 SGRLNDAHKVFEEIPERSVVTWTALFSGYTTA-----GKHREAIDLFKKMVEMGVRPDSY 213
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
L A + D S E I K ++++ N F L K GK++KA+++F
Sbjct: 214 FIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN---SFVRTTLVNLYAKCGKMEKARSVF 270
Query: 186 EELAKDNNSPFGISTRSQMI 205
+ + + + I T S MI
Sbjct: 271 DSMGEKD-----IVTWSTMI 285
>gi|163746869|ref|ZP_02154226.1| hypothetical protein OIHEL45_15739 [Oceanibulbus indolifex HEL-45]
gi|161379983|gb|EDQ04395.1| hypothetical protein OIHEL45_15739 [Oceanibulbus indolifex HEL-45]
Length = 234
Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WIA + ++ I+ A W + +G+ ALE SN AR+ +
Sbjct: 27 YGWIAVVAVIAIVGGAAWNEYSKAQERAQAEALGDAMLAALEADASN----ARAEALAPI 82
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DLAP----LAVRYAATLQAAS 135
+ N + N A L G+ A E +A D DLAP LA A TLQ S
Sbjct: 83 EAEGPGANAVLNFMRADALAEAGEIDAAVEQLDAIALDGDLAPIYRQLAQFKAVTLQGQS 142
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
+ V E + L+ L++P + A E L + ++ G+ KA ++ + D +
Sbjct: 143 VPV-----AERRQALEALAQPGAALRLLAEEQLALIDIQEGETGKAVARYQSILSDAETT 197
Query: 196 FGISTRS-QMILA 207
+ R+ Q+I+A
Sbjct: 198 PDLQQRALQVIVA 210
>gi|290979860|ref|XP_002672651.1| predicted protein [Naegleria gruberi]
gi|284086229|gb|EFC39907.1| predicted protein [Naegleria gruberi]
Length = 536
Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
GD A +F ++ + P V Y LQA S V T S + K +Q +N + Q
Sbjct: 146 GDANEAFTVFNEMLKQNFQPNIVTYLVLLQACSRFVSTDSGNRVIKHIQDNGLYNNEIIQ 205
Query: 163 FANEILGISALKFGKVQKAKTIFEELAK 190
+ + + K G+++ +K IF+EL K
Sbjct: 206 SS---IALYFSKIGELEASKQIFDELLK 230
>gi|225468288|ref|XP_002267847.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
Length = 479
Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
++D A F + +DN L+N + + Y ++L + A ++F+++ N+ L+P
Sbjct: 129 GRIDQAVLLFGTTIERDNILFNSMISGYSQNLL-----GEEALKLFVQMRNNGLSPTDHT 183
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL-----KFGKVQKA 181
+ L A L ++ ++ K+ SN + +SAL K G + +A
Sbjct: 184 LTSILNACGSLTILQQGRQVHSLVAKMGSESN--------VFVVSALLDMYSKCGSIDEA 235
Query: 182 KTIFEELAKDNN 193
+ +F + + N
Sbjct: 236 RCVFYQAVEKNT 247
>gi|148652614|ref|YP_001279707.1| cytochrome c biogenesis factor-like protein [Psychrobacter sp.
PRwf-1]
gi|148571698|gb|ABQ93757.1| Cytochrome c biogenesis factor-like protein [Psychrobacter sp.
PRwf-1]
Length = 471
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 18/120 (15%)
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP----LAVRYAAT-LQAASILVDTS 141
Y+P+ M +A IL+A A E + L+P +AV YA T + ++D+S
Sbjct: 197 YDPMRWMRLADILMAFEANDQALEAQSRAYR--LSPEDEEVAVAYAQTKFFTSGGMLDSS 254
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
S E + +L+K NP HQ A ++ + + G ++A+ E L + GI+ R
Sbjct: 255 SREALQNVLRK-----NPEHQGAQMLMAMGEARSGNYEQAQAWVERLRQ------GIAAR 303
>gi|225467506|ref|XP_002268807.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 719
Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ D R FE+I D L+N + + Y + + +++A E F ++ P +
Sbjct: 292 MSDCRKVFEEITEPDLVLWNTMVSGYSQN----EEFSEDALECFRQMQGIGYRPNDCSFV 347
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ A S L S ++I + K PSN + N ++ + + K G +Q A+ +F+ +
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRI-SVDNALIAMYS-KCGNLQDARRLFDRM 405
Query: 189 AKDN 192
A+ N
Sbjct: 406 AEHN 409
>gi|15222409|ref|NP_176529.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|75205330|sp|Q9SH26|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 67 NKLDDARSSFEKILSQDN----KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++LD+A+ FE ++S+D YN L N + + + +G E+F +++ L
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG-----VELFREMSQRGLVG 433
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
V Y + D + + + K Q +S+ +P N +L K GK++KA
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFK--QMVSDGVHPNIMTYNTLLD-GLCKNGKLEKAM 490
Query: 183 TIFEELAKDNNSP 195
+FE L + P
Sbjct: 491 VVFEYLQRSKMEP 503
>gi|148262188|ref|YP_001228894.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146395688|gb|ABQ24321.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 230
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ + ALEL +L DAR +++K + QD++ + + N+ +L +GD K A
Sbjct: 12 QQYNNALELQQEGRLRDAREAYQKAVEQDSRYCDAMDNL--GQMLRTEGDVKQA 63
>gi|15231970|ref|NP_187494.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|75207322|sp|Q9SR82|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
S +L+DA F++I + + L + Y S G + A ++F K+ + P +
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS-----GRHREAIDLFKKMVEMGVKPDSY 213
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
L A + D S E I K ++++ N F L K GK++KA+++F
Sbjct: 214 FIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN---SFVRTTLVNLYAKCGKMEKARSVF 270
Query: 186 EELAKDNNSPFGISTRSQMI 205
+ + + + I T S MI
Sbjct: 271 DSMVEKD-----IVTWSTMI 285
>gi|170054671|ref|XP_001863235.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874922|gb|EDS38305.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 188
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 141 SSYEEISKILQKLSEPSNPMHQFAN--EILGISALKFGKVQKAKTIFE---ELAKDNNSP 195
S EE+ + LQ L+EP+NP Q + E+ GI + G +Q A T F E A D +P
Sbjct: 34 SGEEELPEDLQDLAEPNNPRIQASKKLELEGIEWAEKGDLQSALTAFTKSIEAAPDRPAP 93
Query: 196 FGISTRSQMILAN 208
+ ++ L N
Sbjct: 94 WNNRAQAHRYLGN 106
>gi|302807738|ref|XP_002985563.1| hypothetical protein SELMODRAFT_11063 [Selaginella moellendorffii]
gi|300146769|gb|EFJ13437.1| hypothetical protein SELMODRAFT_11063 [Selaginella moellendorffii]
Length = 299
Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+LD+AR +F+++ +++N + + +S + + V G + +A + K+ + + P +
Sbjct: 121 GRLDEAREAFDRMPAKNNNV-DVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKPDEIA 179
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
+ L A + TS E+ + ++L SN + N ++ + +G+V A +F+
Sbjct: 180 MSTILGACTAHQATSLGRELHRRARELGYASNTI--VGNALVFMYG-SWGRVDDAARVFQ 236
Query: 187 ELAKDNNSP 195
EL K+ NSP
Sbjct: 237 EL-KNANSP 244
>gi|119944925|ref|YP_942605.1| hypothetical protein Ping_1170 [Psychromonas ingrahamii 37]
gi|119863529|gb|ABM03006.1| conserved hypothetical protein [Psychromonas ingrahamii 37]
Length = 226
Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 27 LLILMILSLA-IWFYLF-DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS--Q 82
L+I ++ LA +W + F + S + + ++ L F S + S ++ Q
Sbjct: 29 LMIAAVIGLAGLWGWRFYNASVITGQEEASQAYSDMLVKFESQGGEAGLDSIRAFIAGNQ 88
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV-ANDDLAPLAVRYAATLQAASILVDTS 141
DN Y L+++ +A V + D A F+++ + ++ APL L+ A +
Sbjct: 89 DNN-YGVLASLLLAKEAVQQKDFALAKAQFVQLQSQNEYAPL--NAVINLRLARVEAQLG 145
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
YE+ K L ++EPS AN++ G L G ++KA+T F++
Sbjct: 146 EYEQALKTLTLITEPSFLAK--ANQVKGSIYLNMGDIEKARTAFQD 189
>gi|149376328|ref|ZP_01894091.1| TPR repeat protein [Marinobacter algicola DG893]
gi|149359342|gb|EDM47803.1| TPR repeat protein [Marinobacter algicola DG893]
Length = 187
Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ + ++ + ++F++A+ L +AR FE+I D + PL+N+ I I + +
Sbjct: 26 EAERQAREAELTQDFSEAVALLRGGDSGNARDLFEQIHQADPERTGPLANLGI--IALQE 83
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G+ A F +V D ++A L ++ E ++ L + + ++P H
Sbjct: 84 GNADEAEAYFRQVLERD-----PEHSAALTHLGVMAREQGEFEQAETLYRQALEADPGHL 138
Query: 163 FANEILGISAL---KFGKVQKAKTIFEE---LAKDNN 193
A +L ++ L G++++A ++E+ LA++ N
Sbjct: 139 PA--MLNLAILLDIYLGRLEEALPLYEQYQSLAEEPN 173
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 35.8 bits (81), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/175 (18%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 63 LFNSNKLDDARSSFEKILSQD----NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
L + ++++AR ++L+ ++Y L+ Y + GD + A +F ++ +
Sbjct: 440 LAKARQMENARLMLNEMLANGVVPSERIYTALTEGYART-----GDVEKAFGVFQRMKKE 494
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN-EILGISALKFGK 177
+LA V Y A L+A ++ + +++ Q++++ +Q +L + + G+
Sbjct: 495 NLAIDIVAYGALLKAC---CNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGR 551
Query: 178 VQKAKTIFEELAKDNNSP-----------FGISTRS---QMILANIIASDQRNKK 218
V++A+ + + +D P +G+S R + +LA ++ S + K
Sbjct: 552 VEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTK 606
>gi|322696035|gb|EFY87833.1| NACHT and Ankyrin domain protein [Metarhizium acridum CQMa 102]
Length = 824
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 128 AATLQAASILVDTSSYEEISKILQKL-------SEPSNPMHQFANEILGISALKFGKVQK 180
AA A L Y + ++L++L S NP FA + LG + G+++
Sbjct: 594 AARQALADDLKRNGRYADAEELLKRLIEDIIRTSSDENPALSFAYDSLGWVLSRQGRLED 653
Query: 181 AKTIFEELAKDNNSPFGIST----RSQMILANIIASDQRNKK 218
AKT + + FG S+ RS++ LA I+A RN +
Sbjct: 654 AKTFLRNAVEASTQQFGSSSPHTLRSRLTLAEILAKLGRNDE 695
>gi|326403268|ref|YP_004283349.1| hypothetical protein ACMV_11200 [Acidiphilium multivorum AIU301]
gi|325050129|dbj|BAJ80467.1| hypothetical protein ACMV_11200 [Acidiphilium multivorum AIU301]
Length = 222
Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 103 GDTKNAAEIFLKVA--NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
GD K A +++ VA N P V A L A + ++ L L++P NP
Sbjct: 113 GDLKTAGQLWAAVAAPNSGATP-PVHDLALLLLAQHEMGVKPDADVRARLATLNKPGNPW 171
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
A L + +K GK + A + EE++ D SP + +Q ++A +
Sbjct: 172 QPLAQLDLALLDMKAGKTKSAHGLLEEVSADPASPPNLRNLAQGLIAKL 220
>gi|118381790|ref|XP_001024055.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305822|gb|EAS03810.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 376
Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA---NDDLAPLAV 125
+++AR S+E++L + KLY +N+ ++ K + A++ + + ND
Sbjct: 240 IEEARQSYEQVLQINPKLYQAQNNL---GLIYRKKEMLEEAKVCYEKSIQINDQY----- 291
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
Y A +SI D + +E + L+K + NP++ A+ LG+ G++++AK F
Sbjct: 292 -YQAYYNLSSIYYDQGNIQEAKQCLEK-AIKINPLYDQAHYNLGLIYYNQGELEEAKRCF 349
Query: 186 EELAKDNNSPFGIS 199
++ N F +
Sbjct: 350 MKVVLINPQDFQVH 363
>gi|170043015|ref|XP_001849199.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167866458|gb|EDS29841.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 661
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMIL---SLAIWFYLFDGSHEKKKNIVGENFA 58
ES DA+S+ K + KC Y + LLIL + +L +W L +GSHE ++
Sbjct: 131 ESLFDADSWITK-EAFKCTYISLNHLLILNLAVYPNLWLWSSLENGSHEFYTQDYSNSYV 189
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYN 88
LEL + A S+ IL D KLY+
Sbjct: 190 NELELVTTWNSSSAHSALADILFHD-KLYD 218
>gi|260575152|ref|ZP_05843153.1| conserved hypothetical protein [Rhodobacter sp. SW2]
gi|259022774|gb|EEW26069.1| conserved hypothetical protein [Rhodobacter sp. SW2]
Length = 215
Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 8/188 (4%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WI LL+++++ A + S G+ ALE + +
Sbjct: 27 YGWIGILLVVLVVGGAAFSEWNKASKRAAAQAFGDAVLAALEAPDPAAR--RAALAAVPA 84
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
S D + N+ +AS D A KVA D P+A R A L+ +
Sbjct: 85 SGDRA---AILNLMLASD--PATDRAGALAALDKVAADTTLPVAYRDLAVLRRVVLAGAD 139
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ + L ++ P P A E L ++ G A T + L D +P G+
Sbjct: 140 MAVADRRAALDPIAAPGRPFRPLALEQLAYLQIEAGDTAAAITALQALTVDQEAPSGLRQ 199
Query: 201 RS-QMILA 207
R+ Q+I+A
Sbjct: 200 RAVQVIVA 207
>gi|289191967|ref|YP_003457908.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938417|gb|ADC69172.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 314
Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 21/162 (12%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA-KGDTKNAAEIFL 113
+N +A+E + + ++A +++LS D K N L +Y+ I++ GD + E F
Sbjct: 9 KNVIKAIEFSDKGEFENAIKCLDEVLSLDPK--NTLV-LYVKGIILKIMGDMDKSMEQFE 65
Query: 114 KVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN-----PMHQFANEI 167
K+ N+ + +PL+ L YE+ K + KLS+ S+ P H+
Sbjct: 66 KIDNNKEKSPLSWTNLICLNFVK-----GDYEKTLKYIDKLSKISSKCYLSPFHK----- 115
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
+ ++ GK ++ F+EL K N+ I + ++L ++
Sbjct: 116 -ALIFIELGKYEEVLKYFDELLKVNDKLSSIWRQKAILLGDL 156
>gi|322374796|ref|ZP_08049310.1| putative helicase [Streptococcus sp. C300]
gi|321280296|gb|EFX57335.1| putative helicase [Streptococcus sp. C300]
Length = 881
Score = 35.4 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 15/166 (9%)
Query: 23 WIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
W L+ L+ A W YL S K+ +GE +A L +S L D +S + + +
Sbjct: 706 WWLTTACLLFLAFASWRYLCYKSPYKRLQSLGEQIRKA--LLDSGHLTDDQSRVQ--VEE 761
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL-AVRYAATLQAASILVDTS 141
D + Y M A + KG + E+F + + AP+ RY Q A S
Sbjct: 762 DKENY-----MVFAYL---KGGSMRDKELFAQTVGEFFAPVDNQRYLLVAQKAP--AGQS 811
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
Y + + +K E + F +G L + + + + I E
Sbjct: 812 KYFVVPSLFEKRKEEAQKFLDFLRPTIGRYHLVYTRTEAGRKILLE 857
>gi|118395268|ref|XP_001029986.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89284269|gb|EAR82323.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 461
Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV- 115
F +A L NKLD+A+ EK L D +PL I I + KGD A EIF K
Sbjct: 281 FYEAKMLQVQNKLDEAQKLLEKCLEFDVANLSPLVYNQIGVIYLQKGDIAKAQEIFFKAL 340
Query: 116 -ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
N++ A + A + + + +Y E +LQ
Sbjct: 341 EINNEEAQIYFNIAVSYNLSKNIEQAINYYEKGLVLQ 377
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 35.4 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
S+ L++AR FE++ ++D +N L Y V G K+A +IF ++ +++AP +
Sbjct: 313 SSSLEEARQVFERLRTRDVITWNILIVAY-----VQYGQAKDALDIFKQMQLENVAPNEI 367
Query: 126 RYAATLQAASIL 137
+ L A ++L
Sbjct: 368 TLSNVLSACAVL 379
>gi|148259764|ref|YP_001233891.1| hypothetical protein Acry_0752 [Acidiphilium cryptum JF-5]
gi|146401445|gb|ABQ29972.1| Uncharacterized protein-like protein [Acidiphilium cryptum JF-5]
Length = 247
Score = 35.4 bits (80), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 103 GDTKNAAEIFLKVA--NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
GD K A +++ VA N P V A L A + ++ L L++P NP
Sbjct: 138 GDLKTAGQLWAAVAAPNSGATP-PVHDLALLLLAQHEMGVKPDADVRARLATLNKPGNPW 196
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
A L + +K GK + A + EE++ D SP + +Q ++A +
Sbjct: 197 QPLAQLDLALLDMKAGKTKSAHGLLEEVSADPASPPNLRNLAQGLIAKL 245
>gi|77165454|ref|YP_343979.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
gi|76883768|gb|ABA58449.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
Length = 934
Score = 35.4 bits (80), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+ +N G +AQ L F + DA +SF+K LS+ N Y P + Y +G
Sbjct: 267 RARNHPGVTYAQGLLHFQQQQYADALTSFQKTLSK-NPEYMP-AVFYAGIAYYQQGQLTQ 324
Query: 108 AAEI---FLK-VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
A ++ FLK + D A A TL A I + +Y IL+ + NP
Sbjct: 325 AGQLLNQFLKRFPHSDTA------AKTL--AMIRLREGNYTSAQAILEPIIA-QNPNDTA 375
Query: 164 ANEILGISALKFGKVQKAKTIFEEL 188
A ++LG + L GK +K+ F+++
Sbjct: 376 ALDLLGSAILGQGKPEKSAAYFQKV 400
>gi|120436880|ref|YP_862566.1| hypothetical protein GFO_2543 [Gramella forsetii KT0803]
gi|117579030|emb|CAL67499.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803]
Length = 1006
Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
W+ D + +K+ F F SN+ ++A++ F ++ +D+K Y + Y+
Sbjct: 125 WYDRVDENAMSRKDRERFYFNNGYAYFRSNQFEEAQTYFNRV--RDSKEYGSQAKYYLGY 182
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ--AASILVDTSSYEE-ISKILQKLS 154
I D + A E F +V +D RY L A + ++E+ I + L++L
Sbjct: 183 IAYEGDDYEEANEYFEEVKGND------RYTEDLSYFQADMNFKLGNFEKAIEQGLEQLP 236
Query: 155 EPSNPMHQFANEILGISALKFGKVQKA 181
+ + N+I+G S GK ++A
Sbjct: 237 KSNRQEIPQLNKIIGESYFNLGKYEEA 263
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
S+ L++AR FE++ ++D +N L Y V G K+A +IF ++ +++AP +
Sbjct: 313 SSSLEEARQVFERMRTRDVITWNILIVAY-----VQYGQAKDALDIFKQMQLENVAPNEI 367
Query: 126 RYAATLQAASIL 137
+ L A ++L
Sbjct: 368 TLSNVLSACAVL 379
>gi|254434614|ref|ZP_05048122.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
oceani AFC27]
gi|207090947|gb|EDZ68218.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
oceani AFC27]
Length = 926
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+ +N G +AQ L F + DA +SF+K LS+ N Y P + Y +G
Sbjct: 259 RARNHPGVTYAQGLLHFQQQQYADALTSFQKTLSK-NPEYMP-AVFYAGIAYYQQGQLTQ 316
Query: 108 AAEI---FLK-VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
A ++ FLK + D A A TL A I + +Y IL+ + NP
Sbjct: 317 AGQLLNQFLKRFPHSDTA------AKTL--AMIRLREGNYTSAQAILEPIIA-QNPNDTA 367
Query: 164 ANEILGISALKFGKVQKAKTIFEEL 188
A ++LG + L GK +K+ F+++
Sbjct: 368 ALDLLGSAILGQGKPEKSAAYFQKV 392
>gi|86132986|ref|ZP_01051576.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|85816504|gb|EAQ37692.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 209
Score = 35.0 bits (79), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 24/128 (18%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG--DTKNAAEIF 112
+ +A+EL++ +KLD+A + FE+I + + N L + ++A I + K D +N E
Sbjct: 24 QGMRKAMELWDQDKLDEASNLFERIATVEKD--NWLPSYHVAQIAIVKNWRDFENQNETT 81
Query: 113 LKVANDDLA-------------PLAVRYAATLQAASILVDTSSY-----EEISKILQKL- 153
LKV D P A A L + D Y I ++ QK+
Sbjct: 82 LKVNGDKAQEYINAMRTIEKDNPYADYLQAQLYTVWVAYDGMKYGMKYAGTIGELYQKMV 141
Query: 154 -SEPSNPM 160
+P NP+
Sbjct: 142 KKDPDNPI 149
>gi|255551975|ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543667|gb|EEF45195.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 875
Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+S + YN + + Y + G K A++IF ++ + P V + + I +
Sbjct: 326 VSLSSHTYNTMIDTYGKA-----GQIKEASDIFAEMLRKRILPTTVTFNTMIH---ICGN 377
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
EE++ ++QK+ E P IL K + A + F+ + KD P +S
Sbjct: 378 QGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVS 437
Query: 200 TRS 202
R+
Sbjct: 438 YRT 440
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ D R FE+I D L+N + + Y + + ++A E F ++ P +
Sbjct: 292 MSDCRKVFEEITEPDLVLWNTMVSGYSQN----EEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ A S L S ++I + K PSN + N ++ + + K G +Q A+ +F+ +
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRI-SVDNALIAMYS-KCGNLQDARRLFDRM 405
Query: 189 AKDN 192
A+ N
Sbjct: 406 AEHN 409
>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
Length = 739
Score = 35.0 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
L +AR+SF++++ +D +S + + L G+ A EIF ++ ++++AP +
Sbjct: 184 LREARASFQEMVVRD-----VVSWTTMITALSEHGEWNEAVEIFWEMVSENVAPNEISCL 238
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L A S L D S I + + + AN ++ + G A+ +F+ L
Sbjct: 239 AVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYG-RCGSPSDARRVFDSL 297
Query: 189 AKDNNSPFGISTRSQMILANIIASDQRNKK 218
S R+ + A++IA+ N++
Sbjct: 298 QH--------SARNAVSWASMIAAYTSNEQ 319
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 68 KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
++D AR F+ I K Y M +A L G + A E++ ++ + P + +
Sbjct: 484 RVDFARMVFDSI---PVKRYPSWRVMLVA--LTQNGHSHEALEMYSRIHLEGFRPGSPIF 538
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+A L + + L D S I +++ S P +N ++ + A K G+++KA+ +F++
Sbjct: 539 SAALVSCTALEDVSRARAIHGVIK--SSDFYPDLVLSNVLMNVYA-KCGELEKARLVFDQ 595
Query: 188 LAKDN 192
+ + N
Sbjct: 596 MTEKN 600
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 35.0 bits (79), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 6/127 (4%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+L +A+ FE+I ++D +N + N Y + + E+F ++ ++ AP A
Sbjct: 54 QRLREAKFVFERIQNKDVVSWNCIINGYSQH---GPSGSSHVMELFQRMRAENTAPNAHT 110
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
+A AAS LVD + + K+ + F L K G +A+ +F+
Sbjct: 111 FAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV---FVGSSLMNMYCKAGLTPEARKVFD 167
Query: 187 ELAKDNN 193
+ + N+
Sbjct: 168 TMPERNS 174
>gi|255034845|ref|YP_003085466.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
gi|254947601|gb|ACT92301.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
Length = 1019
Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Query: 63 LFNSNKLDDARSSFEKIL-SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L+ K D+ + E+IL SQ +Y+A + KGD NA + + + +
Sbjct: 243 LYQLKKFDELLTYGERILGSQRGNTKLDDVALYVAEVYYEKGDYANAVKAYERYKR--MR 300
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+ L +++E L+ + + + Q+A+ ILGIS LK + A
Sbjct: 301 PGAIPPTVALHYGHAQFRNNNFEGAITSLKPIGNGKDSVSQYASYILGISNLKTNSLTNA 360
Query: 182 KTIF 185
T F
Sbjct: 361 LTSF 364
>gi|255321986|ref|ZP_05363136.1| TPR repeat-containing protein [Campylobacter showae RM3277]
gi|255301090|gb|EET80357.1| TPR repeat-containing protein [Campylobacter showae RM3277]
Length = 298
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + +K +++ E A +LF++ KLDDA++ +E +LS+D+K ++N Y+ I
Sbjct: 178 DFTKQKNQDVASE----AKKLFDTGKLDDAKARYEYLLSKDHKP--AMANFYLGEI 227
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 34.7 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
LD A F+ IL +D ++N + S+LVA A E+F ++ + P
Sbjct: 190 LDSAWGVFDGILVRDAAVWNAM-----ISLLVAHEQGDEALELFRQMRLGGVTPNKGTCV 244
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L A D S I ++L+ ++ + Q A ++ + KFGKV A+ IFE +
Sbjct: 245 AALNACCHSRDFSEALRIHAFARELAGDADTVVQTA--LVNMYG-KFGKVDDAEEIFERI 301
>gi|262196389|ref|YP_003267598.1| multi-sensor hybrid histidine kinase [Haliangium ochraceum DSM
14365]
gi|262079736|gb|ACY15705.1| multi-sensor hybrid histidine kinase [Haliangium ochraceum DSM
14365]
Length = 765
Score = 34.7 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQA----ASILVDTSSYEEISKILQKLSEPSNP 159
+ K AAE+ +V +D LA ++ L AS+L+DT +E + + + N
Sbjct: 376 EAKEAAEVASRVKSDFLATMSHEIRTPLNGVIGMASLLLDTELSDEQREYAETIDVSGNL 435
Query: 160 MHQFANEILGISALKFGKVQKAKTIFE 186
+ N+IL S ++ G+++ + FE
Sbjct: 436 LLALINDILDFSKIEAGRMELEEVAFE 462
>gi|169859304|ref|XP_001836292.1| hypothetical protein CC1G_06377 [Coprinopsis cinerea okayama7#130]
gi|116502581|gb|EAU85476.1| hypothetical protein CC1G_06377 [Coprinopsis cinerea okayama7#130]
Length = 382
Score = 34.7 bits (78), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+ A L+ YE K +++ E + + A E+LG+S L+ G++ +A+ +FE L
Sbjct: 34 ALLKKAQELIVQCDYELALKFAKRILE-QDATNVEAKEMLGVSLLETGEIDEARKVFESL 92
Query: 189 AKDN-NSPFGISTRSQMILANIIASDQR 215
N +P + + LA + D R
Sbjct: 93 IPPNPGAPAVPPPSAHLYLAQLSEEDPR 120
>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
Length = 804
Score = 34.7 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ ++D R F+ + ++ +N L Y+ + G + A E+F+++ D P
Sbjct: 158 YREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKT-----GRPQEALELFVRMLEDGFRPT 212
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL-----KFGKV 178
V + AA + D S ++ +L K ++ N++ +S+ +FG V
Sbjct: 213 PVSFVNIFPAA-VADDPSWPFQLYGLLVKYGV------EYINDLFVVSSAIDMFSEFGDV 265
Query: 179 QKAKTIFEELAKDN 192
Q A+ +F+ AK N
Sbjct: 266 QSARRVFDRAAKKN 279
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 34.7 bits (78), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Query: 67 NKLDDARSSFEKILSQ----DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++LD+A+ FE ++S+ D YN L + V +G E+F +++ L
Sbjct: 170 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG-----MEVFREMSQRGLVG 224
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
V Y +Q D +EI K + P N M N +L K GK++KA
Sbjct: 225 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY--NTLLD-GLCKNGKLEKAM 281
Query: 183 TIFEELAKDNNSP 195
+FE L + P
Sbjct: 282 VVFEYLQRSKMEP 294
>gi|332292869|ref|YP_004431478.1| hypothetical protein Krodi_2229 [Krokinobacter diaphorus 4H-3-7-5]
gi|332170955|gb|AEE20210.1| hypothetical protein Krodi_2229 [Krokinobacter diaphorus 4H-3-7-5]
Length = 209
Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG--DTKNAAEIF 112
+ +A+EL+ NKLD+A + FE+I + + N L Y+A I + + D +N E
Sbjct: 24 QGMTKAMELWEENKLDEASNLFERIATVEKD--NWLPTYYVAQIAIIRNWRDFENREEAT 81
Query: 113 LKVANDDLA-------------PLAVRYAATLQAASILVDTSSY-----EEISKILQKL- 153
+K D P A A L + D Y I ++ QK+
Sbjct: 82 MKATLDKAQEFINTMRTIAPDNPYADHLQAQLYTVWVAHDGMKYGMKYAGTIGELNQKMV 141
Query: 154 -SEPSNPMH--QFANEILGISALKFG--------KVQKAKTIF 185
EP NP+ + A +G SA FG ++Q+A T+F
Sbjct: 142 NKEPDNPIFIAEKAQWDMG-SARYFGSSIAPYCAELQRAITLF 183
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 34.7 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ DAR F++++ +D YN + Y A L K A ++F ++ + L P V Y
Sbjct: 480 VKDARQVFDRMIQRDIVAYNAMIGGYAAHNL-----GKEALKLFDRLQEEGLKPDKVTYI 534
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
L A + EI +++K S+ N ++ A K G A +FE++
Sbjct: 535 NMLNACANSGSLEWAREIHTLVRKGGFFSDT--SVGNALVSTYA-KCGSFSDASIVFEKM 591
Query: 189 AKDN 192
K N
Sbjct: 592 TKRN 595
>gi|145539410|ref|XP_001455395.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423203|emb|CAK87998.1| unnamed protein product [Paramecium tetraurelia]
Length = 1109
Score = 34.7 bits (78), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
A L + K A + K N AV AA L+ A L ++ Y+E +K L KL E
Sbjct: 328 ADCLRIQNQYKEAISYYQKAIN---CEQAVGNAALLKKAITLYESQQYDECAKDLSKLIE 384
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
++P++ A G+ LK +A FE+ K NNS ++
Sbjct: 385 -TDPINSEAYYFKGLCKLKTKNPTEALLCFEQAIKHNNSKKAVT 427
Searching..................................................done
Results from round 2
>gi|254780421|ref|YP_003064834.1| hypothetical protein CLIBASIA_01530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040098|gb|ACT56894.1| hypothetical protein CLIBASIA_01530 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 218
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 218/218 (100%), Positives = 218/218 (100%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA
Sbjct: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL
Sbjct: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK
Sbjct: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
AKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK
Sbjct: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
>gi|315122135|ref|YP_004062624.1| hypothetical protein CKC_01925 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495537|gb|ADR52136.1| hypothetical protein CKC_01925 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 220
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 143/218 (65%), Positives = 173/218 (79%), Gaps = 1/218 (0%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M+SN D +S K CK+ K YK I PLLIL++LSLA W YL GS+ K KN GE+F+QA
Sbjct: 1 MKSNKDTSSCKEGCKIKKYGYKLIVPLLILIVLSLASWLYLH-GSYNKPKNPAGEDFSQA 59
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L N+NKLDDAR +FEKILS DN+ Y+ ++NMYIASILV KGD K+A+E FLKV NDDL
Sbjct: 60 ISLLNNNKLDDARIAFEKILSYDNRSYDSIANMYIASILVTKGDVKSASEKFLKVGNDDL 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A VRY A L AA ILVDT SY++ISKILQKL +PSNPMH ANEILGISA+K GK++K
Sbjct: 120 ALPVVRYTAILHAAWILVDTVSYDDISKILQKLIDPSNPMHPAANEILGISAMKCGKIEK 179
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
A++IFEE+ KD NSP GISTRSQ++LANIIAS++ KK
Sbjct: 180 ARSIFEEIVKDPNSPPGISTRSQIMLANIIASNKETKK 217
>gi|319899215|ref|YP_004159308.1| hypothetical protein BARCL_1057 [Bartonella clarridgeiae 73]
gi|319403179|emb|CBI76738.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 223
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + + I +++ +++ ++ ++ K + VG+ F ++L
Sbjct: 9 EVNEELRQEKFYAFWKRYGFLIIGAIIVFVLMI--AFYQIYHHQQMNKASNVGDKFIKSL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L +++ D+A E + D Y L+ + AS+ + +GD + ++F + ++ A
Sbjct: 67 DLADAHHFDEAIKQLESVKKSDFGGYPFLAGLREASLWMERGDAVKSVKMFDVIVANERA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++AA ILVD +++++ + ++ ++ +PM A E LG++A K K++ A
Sbjct: 127 PQILRKVAKIRAAYILVDIGTFDDVIQRVKDMANDIDPMRMSAREALGLAAYKANKMENA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F+++ ++ F I+ R++++L I AS + NK+
Sbjct: 187 VYYFQKIVEEGAIGFKITDRAKIMLELIQASGKVNKE 223
>gi|319406080|emb|CBI79710.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 223
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 118/217 (54%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + I ++I +++ + + ++ K N VG+ F L
Sbjct: 9 EVNEELRQEKFYTFWKRYGSFVIGAVIIFVLMIII--YQIYQQQQINKANNVGDTFITGL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L +++ D+A F+ + D Y L+++ AS+ +GDT + ++F +A D+ A
Sbjct: 67 DLADAHHFDEAIKKFKSVKKSDFGGYPFLADLREASLWTERGDTAKSVKMFDMIAADEKA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++AA ILVD +++++ + +++++ +PM A E+LG++A K K++ A
Sbjct: 127 PQILRKIAKIRAAYILVDIGTFDDVMQRVKEMANDIDPMRMSAREVLGLAAYKADKMENA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F+++ ++N F I+ R++++L I AS + NK+
Sbjct: 187 VYYFQKIVEENALGFKITDRAKIMLELIQASGKVNKE 223
>gi|319408189|emb|CBI81842.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 223
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 116/216 (53%), Gaps = 2/216 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + G+ + I I+ +L++A++ ++ K + +G+ F +L
Sbjct: 9 EVNEELRQEKVRAFWGRYSFL-IIVSAIIFVLAIAVY-QIYHYGQMNKASKIGDTFITSL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L +S + D+A + E + + D Y L+ + AS+L+ +G+ + E+F VA D A
Sbjct: 67 NLADSLQFDEAMNQLESVKTSDFGGYPFLARLREASLLMQQGNAVKSVEVFDAVAADKNA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P ++ A ++A+ ILVD +++++ K + ++ +PM A E+LG++A K K+ A
Sbjct: 127 PQILQRVAKIRASYILVDIGTFDDVKKRVNDMANDIDPMRMSAREVLGLAAYKANKIDDA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
F++++++N I R++++L I + + NK
Sbjct: 187 IYYFQKISEENVLGLKIIDRAKIMLELIQSERKVNK 222
>gi|319404572|emb|CBI78178.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 223
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 116/217 (53%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + + I ++I ++ + + ++ K N VG+ F +L
Sbjct: 9 EVNEELRQEKFYNFWKRYGFLVIGAVIIFVLTIIV--YQIYQQQQINKANNVGDIFITSL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L +++ D+A E + + Y L+ + AS+ +GD + +IF +A D+ A
Sbjct: 67 DLADAHHFDEAIKKLESVKQSNFGGYPFLAGLLEASLWTQRGDNAKSVKIFDMIAADEKA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++AA IL+D +++++ + +++++ +PM A E LG++A K K++KA
Sbjct: 127 PQILREVAKIRAAYILIDIGTFDDVMQRVKEMANDIDPMRMSAREALGLAAYKANKMEKA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F+++ ++N F I+ R++++L I AS + NK+
Sbjct: 187 VYYFKKIVEENALGFKITDRAKIMLELIQASGKVNKE 223
>gi|163867848|ref|YP_001609052.1| hypothetical protein Btr_0618 [Bartonella tribocorum CIP 105476]
gi|161017499|emb|CAK01057.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 223
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 116/217 (53%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + + I +L L IL + I+ ++ + KK + VG+ F ++L
Sbjct: 9 EVNAEFRQEKALAFWRRYGFSMIGAVL-LFILMITIY-QIYHHTQIKKASYVGDAFVKSL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL ++ D A E + Y L+ + AS+L+ +GD + EIF VA D+ A
Sbjct: 67 ELADTRHFDKAIKQLENVRDSHFGGYPFLARLREASLLMEQGDFIKSVEIFDSVAADEKA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++AA +LVD+ + +++ K ++ ++ +PM A E LG++A K GKV +A
Sbjct: 127 PQILRKVAKIRAAYLLVDSGTLDDVKKRVKDMTSDIDPMRMSAREALGLAAYKAGKVDEA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F++++++ I+ R++++L + A + NK+
Sbjct: 187 VDYFQKISEEGVLRSNITDRARIMLELMQAEGKVNKE 223
>gi|319407563|emb|CBI81213.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 223
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 117/217 (53%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + + I ++I ++ + + ++ K N VG+ F +L
Sbjct: 9 EVNEELRQEKFYNFWKRYGFLVIGAVIIFVLTIII--YQIYQQQQINKANNVGDIFMTSL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L +++ D+A E + + Y L+ + AS+ + +GD + ++F +A D+ A
Sbjct: 67 DLADAHHFDEAIKKLESVKQSNFGGYPFLAGLREASLWMERGDNAKSVKMFDMIAADEKA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++AA ILVD +++++ + +++++ +PM A E LG++A K K++KA
Sbjct: 127 PQILREVAKIRAAYILVDIGTFDDVMQRVKEIANDIDPMRMSAREALGLAAYKENKMEKA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F+++ ++N F I+ R++++L I A+ + NK+
Sbjct: 187 VYYFKKIVEENALGFKITDRAKIMLELIQANGKVNKE 223
>gi|240850056|ref|YP_002971449.1| hypothetical protein Bgr_04400 [Bartonella grahamii as4aup]
gi|240267179|gb|ACS50767.1| hypothetical protein Bgr_04400 [Bartonella grahamii as4aup]
Length = 223
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + + I ++ +++ +A + ++ KK +G+ F ++L
Sbjct: 9 EVNAEFRQEKALAFWRRYGFSIIGAAILFILMIVA--YQIYHHQQIKKAGYIGDAFVKSL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ ++ D A E + + Y L+ + AS+L+ KGD + EIF VA D+ A
Sbjct: 67 DFADTRHFDKAIKQLETVKTSHFGGYPFLARLREASLLMEKGDIIKSVEIFDSVAADEKA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P ++ A ++AA ILVDT + ++ K ++ ++ ++PMH A E LG++A K K+ +A
Sbjct: 127 PEILQKVAKIRAAYILVDTGTLADVEKRIKDMTSDTDPMHMSAREALGLAAYKADKMDEA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F+++++ I+ R++++L I A + NK+
Sbjct: 187 VYYFKKISEKGALGSKITDRARIMLELIQAEGKANKE 223
>gi|86358710|ref|YP_470602.1| hypothetical protein RHE_CH03109 [Rhizobium etli CFN 42]
gi|86282812|gb|ABC91875.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 227
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 117/214 (54%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + ++I + IL++L A L++ + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGVWRRFG-RYIIVVAILIVLGTAG-KVLYEYWDDTRSSGAGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A ++ EK+ + + Y L+ M A++ KGD A F ++ D+
Sbjct: 69 KLADENKNDEALAALEKLEKEGHGAYPVLARMRAATVQAQKGDAGAAIAAFNEIGKDNSV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P AVR A ++A +L++ SYE++S ++++++ PSN A E LG++A K G + +A
Sbjct: 129 PAAVRDVAKMRAGWLLIENGSYEQVSAVIEEMAVPSNAFRHSAREALGLAAYKAGNMAQA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+ F+ + D SP ++ R+QM+L I AS +
Sbjct: 189 RQWFQSIVDDAGSPRPVANRAQMMLDLITASGKA 222
>gi|239831250|ref|ZP_04679579.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823517|gb|EEQ95085.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 268
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ PL+I + I+ + + + K + G+ F AL+L +
Sbjct: 52 NEEIRSERAKQVWRNFGPLVIGAAVAIVLGTAGWVGYQHWTDSKASASGDKFLAALDLAS 111
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
K D+A ++ + Y L+ + AS++ KGD A + F VA D+ P +
Sbjct: 112 EGKNDEALAALADLEKTGYGSYPVLARLRAASVIADKGDAAGAVKAFDDVAADNAVPAPL 171
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD+ SY++++K ++ LS NPM A E LG++A K + A +F
Sbjct: 172 RDVARLRAGYLLVDSGSYDDVAKRVETLSADGNPMRSSAREALGLAAWKAERFDDAVKLF 231
Query: 186 EELAKDNNSPFGISTRSQMILANIIASD 213
+++A D+ +P I RS +L + ++
Sbjct: 232 QQIANDSLAPANIRQRSNTMLDLMRSAG 259
>gi|121602031|ref|YP_988692.1| hypothetical protein BARBAKC583_0373 [Bartonella bacilliformis
KC583]
gi|120614208|gb|ABM44809.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 223
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + + + + I+ IL++ + ++ + +G+ F ++L
Sbjct: 9 EVNEEFRQEKVYAFLKRHGFL-VIVAAIIFILAIVGY-QVYSHKKMNEARNIGDIFIKSL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L +S+ D A + E + + + Y L+ + AS+L +GD A E+F VA D+ A
Sbjct: 67 SLADSHDFDQAMNQLELVKASNFAGYPFLARLREASLLSEQGDAVRAVEMFDTVAFDEKA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P ++ A +QAA ILVD + +++ K +Q ++ +PM A E LG++A K K+ +A
Sbjct: 127 PQILQKVAKIQAAYILVDIGTLDDVKKRVQDIANDIDPMRISAREALGLAAYKADKMDEA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F++++++ N I R++++L I A + NK+
Sbjct: 187 VYYFQKISEEGNLGIKIVERAKIMLELIQAEGKVNKE 223
>gi|150376650|ref|YP_001313246.1| hypothetical protein Smed_4513 [Sinorhizobium medicae WSM419]
gi|150031197|gb|ABR63313.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 222
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ S + K + I + +L++L + +D E + G+ F AL
Sbjct: 11 EVNDELRSDQMKAVWTRFG-SIIIGIAVLIVLGT-VGKVGYDYWQESSSSQSGDTFLVAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L NK D+A ++ + + Y L+ + +A++ KG+T A + F + D
Sbjct: 69 NLARENKSDEALAALTGLEKEGYGSYPVLAQLRLATLQAQKGETDAAVKAFSGIGRDTRI 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+R AA L+AA +L+D +YE++S +++L+ P N M A E LG+SA K G KA
Sbjct: 129 PTALRDAARLRAAYLLIDAGTYEQVSSEVEQLAVPQNAMRHSAREALGLSAYKAGDYAKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
K+ F+++ D SP G+ R+QM+L I +S +
Sbjct: 189 KSWFQQIVDDTESPRGVMNRAQMLLDVIASSGKA 222
>gi|49475206|ref|YP_033247.1| hypothetical protein BH04070 [Bartonella henselae str. Houston-1]
gi|49238011|emb|CAF27216.1| hypothetical protein BH04070 [Bartonella henselae str. Houston-1]
Length = 223
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + W+ I+ +L + I+ ++ KK +G+ F + L
Sbjct: 9 EVNAEFRQEKALAFWRRYG-LWVVFAAIIFVLMIVIY-QIYHHVQMKKAGHIGDAFIEVL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ ++ D+A E + + + Y L+ + AS+L+ +GD + E+F +A D+ A
Sbjct: 67 DFADTRHFDEAMKRLEDVKASNFGGYPFLARLREASLLMEQGDAVKSVEVFDSIAADEKA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++AA ILVDT S +++ K ++ ++ M A E LG++A K K+ +A
Sbjct: 127 PPILRAVAKIRAAYILVDTGSLDDVKKRVKDMANDLGSMRMSAREALGLAAYKADKMDEA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F +++K+ I+ R++++L + A + N++
Sbjct: 187 VDYFRKISKEGALGSKITERARIMLELMQAEGKANRE 223
>gi|16264870|ref|NP_437662.1| hypothetical protein SM_b20996 [Sinorhizobium meliloti 1021]
gi|15141009|emb|CAC49522.1| HYPOTHETICAL PROTEIN SM_b20996 [Sinorhizobium meliloti 1021]
Length = 222
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ S + K + I + +L++L + +D E + G+ F AL
Sbjct: 11 EVNDELRSDQMKAVWTRFG-GIIIGIAVLIVLGT-VGKVGYDYWQESSSSQSGDTFLAAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L NK D+A ++ ++ Y L+ + +A++ KG+T +A F ++ D
Sbjct: 69 NLARENKSDEALAALTELEKDGYGSYPVLAQLRVATLQAQKGETDSAVAAFSEIGRDTRI 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+R AA L+AA +L+D +YE++S +++L+ P N M A E LG+SA K G KA
Sbjct: 129 PAALRDAARLRAAYLLIDAGTYEQVSSEVEQLAVPQNAMRHSAREALGLSAYKAGDYAKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
K+ F+++ D SP GI R+QM+L I ++ +
Sbjct: 189 KSWFQQIVDDAQSPRGIMNRAQMLLDVIASTGKA 222
>gi|49473956|ref|YP_031998.1| hypothetical protein BQ03100 [Bartonella quintana str. Toulouse]
gi|49239459|emb|CAF25810.1| hypothetical protein BQ03100 [Bartonella quintana str. Toulouse]
Length = 223
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + K + + + I+ +L +AI ++ KK +G+ F + L
Sbjct: 9 EVNAEFRQEKALAFWRRYGFS-VIVAAIIFVLIIAI-HQIYHYEQMKKAGHIGDAFMKVL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ ++ D+A + + + + Y L+ M+ AS+L+ +GD + E F VA D+ A
Sbjct: 67 DFADTRHFDEAMKQLKNVKASNFGGYPFLARMHEASLLMEQGDAVKSVEAFDSVAADEKA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++AA ILVDT + +++ K ++ + +PM A E LG++A K K+ +A
Sbjct: 127 PPILRKVAKIRAAYILVDTGTLDDVKKRVKDMENDIDPMRMSAREALGLAAYKADKMDEA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F +++K+ + R++++L + A + +K+
Sbjct: 187 VDYFRKISKEGVLGSKATERARIMLELMQAEGKADKE 223
>gi|190892853|ref|YP_001979395.1| hypothetical protein RHECIAT_CH0003269 [Rhizobium etli CIAT 652]
gi|190698132|gb|ACE92217.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327189206|gb|EGE56386.1| hypothetical protein RHECNPAF_700018 [Rhizobium etli CNPAF512]
Length = 227
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + ++I IL+++ A L+D + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGAWRRFG-RYIIVAAILIVVGTAG-KVLYDYWDDSRSSGAGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A ++ +K+ + + Y L+ M A++ KGD A F ++ D+
Sbjct: 69 KLADENKNDEALAALDKLEKEGHGAYPVLARMRAATVQAQKGDAAAAIAAFNEIGKDNGV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P AVR AA ++A +L++ SYE++S +++++ P N A E LG++A K G + +A
Sbjct: 129 PAAVRDAARMRAGWLLIENGSYEQVSAAIEEMAVPGNAFRHSAREALGLAAYKAGNMAQA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+ F+ + D SP ++ R+QM+L I AS +
Sbjct: 189 RQWFQSIIDDAESPRPVANRAQMMLDLITASGKA 222
>gi|159185150|ref|NP_355258.2| hypothetical protein Atu2301 [Agrobacterium tumefaciens str. C58]
gi|159140421|gb|AAK88043.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 223
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 2/215 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N S + G+ + +++++ + +++ + + + G+ F AL
Sbjct: 11 EVNEQIRSEQLSRFWGRYGIVVVGAAILVVVGAAGAG--IYEYWNTSRASNSGDQFLAAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK DDA +F + + + Y L+ A++L KGD A F + ND A
Sbjct: 69 KLASENKTDDALKAFADLETTGHGNYPVLAKFRSATLLSQKGDAAGAIAAFTAIGNDTSA 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A ++AA +LVD +Y+++ + + LS M A E LG++A K G KA
Sbjct: 129 PQVFRDTARVRAAWLLVDNGTYDQVVALAEPLSTDGQTMRASAREALGLAAYKAGDFAKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
K FE++ D +P ++ R+Q++L NI AS +
Sbjct: 189 KQWFEQIMSDTQAPRNVTNRAQIMLDNITASGKAA 223
>gi|307307990|ref|ZP_07587708.1| Protein of unknown function DUF2133 [Sinorhizobium meliloti BL225C]
gi|306901394|gb|EFN31998.1| Protein of unknown function DUF2133 [Sinorhizobium meliloti BL225C]
Length = 222
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ S + K + I + +L++L + +D E + G+ F AL
Sbjct: 11 EVNDELRSDQMKAVWTRFG-GIIIGIAVLIVLGT-VGKVGYDYWQEASSSQSGDTFLAAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L NK D+A ++ ++ Y L+ + +A++ KG+T +A F + D
Sbjct: 69 NLARENKSDEALAALTELEKDGYGSYPVLAQLRVATLQAQKGETDSAVAAFSGIGRDTRI 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+R AA L+AA +L+D +YE++S +++L+ P N M A E LG+SA K G KA
Sbjct: 129 PAALRDAARLRAAYLLIDAGTYEQVSSEVEQLAVPQNAMRHSAREALGLSAYKAGDYAKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
K+ F+++ D SP GI R+QM+L I ++ +
Sbjct: 189 KSWFQQIVDDAQSPRGIMNRAQMLLDVIASTGKA 222
>gi|222149420|ref|YP_002550377.1| hypothetical protein Avi_3303 [Agrobacterium vitis S4]
gi|221736403|gb|ACM37366.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 223
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 115/215 (53%), Gaps = 2/215 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ S + + + +I + +L+++ A + L+D + + + G+ F A
Sbjct: 11 EVNDELRSEQMRRFWRRLGPVFIG-IAVLIVVGTAGY-RLYDYYTDDRASKSGDRFLAAT 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L K D A S + + Y L+ + AS++ KGD K A + F + D+
Sbjct: 69 KLATDGKNDQALSDLQALEKDGFGAYPVLAKLRAASLMAEKGDAKAAIDAFTAIGKDNSV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++AA +L+D +YE++S ++ L+ P + A E LG++A K G+ ++A
Sbjct: 129 PQVIRDVAHIRAAWLLIDNGTYEQVSTEVEALAVPGQGLRHSAREALGLAAYKAGQTERA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+ F+++ +D+ +P ++ R+Q++L NI A+ + +
Sbjct: 189 REWFQQITEDSEAPRNVANRAQIMLDNIAAAGKAS 223
>gi|218516155|ref|ZP_03512995.1| hypothetical protein Retl8_22038 [Rhizobium etli 8C-3]
Length = 227
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 115/214 (53%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + ++I IL+++ A L++ + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGAWRRFG-RYIIVAAILIVVGTAG-KVLYEYWDDSRSSGAGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A ++ +K+ + + Y L+ M A++ KGD A F ++ D+
Sbjct: 69 KLADENKNDEALAALDKLEKEGHGAYPVLARMRAATVQAQKGDAAAAIAAFNEIGKDNGV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P AVR AA ++A +L++ SYE++S +++++ P N A E LG++A K G + +A
Sbjct: 129 PAAVRDAARMRAGWLLIENGSYEQVSAAIEEMAVPGNAFRHSAREALGLAAYKAGNMAQA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+ F+ + D SP ++ R+QM+L I AS +
Sbjct: 189 RQWFQSIIDDAESPRPVANRAQMMLDLITASGEA 222
>gi|153007832|ref|YP_001369047.1| hypothetical protein Oant_0487 [Ochrobactrum anthropi ATCC 49188]
gi|151559720|gb|ABS13218.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 227
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ PLLI + I+ + + + K + G+ F AL+L +
Sbjct: 11 NEEIRSERAKQIWRNFGPLLIGGAVAIVLGTAGWVGYQHWVDSKASASGDKFLAALDLAS 70
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
K D+A ++ + + Y L+ + AS++ KGD A + F +VA D+ P +
Sbjct: 71 EGKNDEALTALDDLEKTGYGSYPVLARLRAASVIADKGDAAGAVKAFDEVAADNAVPAPL 130
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD+ SY++++K ++ LS NPM A E LG++A K + A +F
Sbjct: 131 RDVARLRAGYLLVDSGSYDDVAKHVETLSADGNPMRSSAREALGLAAWKAERFDDAVKLF 190
Query: 186 EELAKDNNSPFGISTRSQMILANIIASD 213
+++A D+ +P I R+ +L + ++
Sbjct: 191 QQIANDSLAPANIRQRANTMLDLMRSAG 218
>gi|307319942|ref|ZP_07599365.1| Protein of unknown function DUF2133 [Sinorhizobium meliloti AK83]
gi|306894482|gb|EFN25245.1| Protein of unknown function DUF2133 [Sinorhizobium meliloti AK83]
Length = 222
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ S + K + I + +L++L + +D E + G+ F AL
Sbjct: 11 EVNDELRSDQMKAVWTRFG-GIIIGIAVLIVLGT-VGKVGYDYWQEASSSQSGDTFLAAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L NK D+A ++ ++ Y L+ + +A++ KG+T A F + D
Sbjct: 69 NLARENKSDEALAALTELEKDGYGSYPVLAQLRVATLQAQKGETDAAVAAFSGIGRDTRI 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+R AA L+AA +L+D +YE++S +++L+ P N M A E LG+SA K G KA
Sbjct: 129 PAALRDAARLRAAYLLIDAGTYEQVSSEVEQLAVPQNAMRHSAREALGLSAYKAGDYAKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
K+ F+++ D SP GI R+QM+L I ++ +
Sbjct: 189 KSWFQQIVDDAQSPRGIMNRAQMLLDVIASTGKA 222
>gi|116253296|ref|YP_769134.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257944|emb|CAK09042.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 227
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 115/214 (53%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + + ++ ++I+ L+D + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGVWRR--FGRYIVVVAILIVVGTAGKVLYDYWDDNRSSGTGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A ++ +K+ + + Y L+ M A++ V KGDT A F ++ D+
Sbjct: 69 KLADENKNDEALAALDKLEKEGHGAYPVLARMRAATVQVQKGDTVAAIAAFNEIGKDNAV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P AVR AA ++A +L++ +YEE+S +++++ P N A E LG++A K G + +A
Sbjct: 129 PAAVRDAAKMRAGWLLIENGTYEEVSAAIEEMAVPGNAFRHSAREALGLAAYKAGNMAQA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+ F+ + D +SP ++ R+ M+L I AS +
Sbjct: 189 RQWFQSIVDDTDSPRNVANRAHMMLDLITASGKA 222
>gi|241205815|ref|YP_002976911.1| hypothetical protein Rleg_3116 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859705|gb|ACS57372.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 227
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 114/214 (53%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + + ++ ++I+ L+D + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGVWRR--FGRYIIVVAILIVVGTAGKVLYDYWDDNRSSGTGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A ++ K+ + + Y L+ M A++ V KGDT A F ++ D+
Sbjct: 69 KLADENKNDEALAALNKLEKEGHGAYPVLARMRAATVQVQKGDTAAAITAFNEIGKDNAV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P AVR AA ++A +L++ +YE++S +++++ P N A E LG++A K G + +A
Sbjct: 129 PAAVRDAAKMRAGWLLIENGTYEQVSAAIEEMAVPGNAFRHSAREALGLAAYKAGNMAQA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+ F+ + D +SP ++ R+ M+L I AS +
Sbjct: 189 RQWFQSIVDDTDSPRNVANRAHMMLDLITASGKA 222
>gi|209550426|ref|YP_002282343.1| hypothetical protein Rleg2_2847 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536182|gb|ACI56117.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 227
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 113/214 (52%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + + ++ ++I+ L++ + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGVWRR--FGRYIIVVAILIVVGTAGKVLYEYWDDTRSSGAGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A ++ +K+ + + Y L+ M A++ KGD A F ++ D+
Sbjct: 69 KLADENKNDEALAALDKLEKEGHGAYPVLARMRAATVQAQKGDAAAAIAAFNEIGKDNGV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P AVR AA ++A +L++ SYE++S +++++ P N A E LG+++ K G + +A
Sbjct: 129 PAAVRDAAKMRAGWLLIENGSYEQVSAAIEEMAVPGNAFRHSAREALGLASYKAGNMAQA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+ F+ + D +SP ++ R+ M+L I AS +
Sbjct: 189 RQWFQSIVDDTDSPRNVTNRAHMMLDLITASGKA 222
>gi|222086679|ref|YP_002545213.1| hypothetical protein Arad_3292 [Agrobacterium radiobacter K84]
gi|221724127|gb|ACM27283.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 227
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + + + + I +L+++ A + + ++ G+ F AL
Sbjct: 11 EVNEELRSDQLRFVWRRFG-RVIIGAAVLIVVGTAAYS-GYRYWSGQQAGNSGDQFISAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + NK D+A ++ I + Y L+ + A++ KGDT A F + +
Sbjct: 69 TLADQNKTDEALAALAAIEKDGSGSYPLLARLRAATLQAQKGDTAGAVAAFSAIGKETGL 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R AA L+AA +LVDT +Y++++ Q+L+ P+N A ++LG++A K G KA
Sbjct: 129 PTVIRDAARLRAAYLLVDTGTYDQVAAEAQELAVPANTFRHSARDVLGLAAYKAGDFAKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+ F+ + D SP + R+QM+L I AS +
Sbjct: 189 RQWFQAIVDDPQSPRNVGNRAQMLLDLITASGKA 222
>gi|227822914|ref|YP_002826886.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227341915|gb|ACP26133.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 222
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + I ++++ + +D E + G+ F AL
Sbjct: 11 EVNEELRSDQMKAIWTRFGGVIIGVAALIVL--GTVGKVGYDYWQESSSSQSGDAFLVAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L N+ ++A + K+ + Y L+ + A++ KG+T+ A F ++ D+
Sbjct: 69 DLAKENRSEEALGALTKLEQEGYGSYPVLARLRAATLKAQKGETEAAFAAFSEIGKDNRI 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+R AA L+AA +L+DT +Y+++S +++L+ P N M A E LG++A K G KA
Sbjct: 129 PAALRDAARLRAAYLLIDTGTYDQVSAEVEQLAVPQNAMRHSAREALGLAAFKAGDYAKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
K F+++A D SP G++ R+QM+L I AS +
Sbjct: 189 KGWFQQIADDTESPRGVANRAQMLLDVIAASGKA 222
>gi|319784771|ref|YP_004144247.1| hypothetical protein Mesci_5097 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170659|gb|ADV14197.1| Protein of unknown function DUF2133 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 221
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ + + + + + IL++L A + + E + N G+ F+QAL
Sbjct: 9 EVNDEIRREQAQALWDRFG-PALIVVAILVVLGTAAFV-GYRYWDETRANRSGDAFSQAL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L N K D+A ++ +++ Y L+ M A++ KGD A + F +VA D
Sbjct: 67 KLANDGKNDEALTALDQLEKDGYGAYPLLARMRGATVKANKGDVPAAVKDFDEVAADTAI 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P ++R A L+AA +LVD S+ ++S ++ L+ +N + A E LG+SA K GK Q A
Sbjct: 127 PQSIRDMARLRAALLLVDHGSFADVSSRVEALTSDTNTLRHTAREALGLSAWKEGKTQDA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+F+++A D+ +P R+ ++ I S +
Sbjct: 187 LKLFDQIAADDGAPRNTRERATLMSELIRGSGSAS 221
>gi|325293657|ref|YP_004279521.1| hypothetical protein AGROH133_07947 [Agrobacterium sp. H13-3]
gi|325061510|gb|ADY65201.1| hypothetical protein AGROH133_07947 [Agrobacterium sp. H13-3]
Length = 223
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 2/214 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N S + G+ Y + ++++ A +++ + + + G+ F AL
Sbjct: 11 EVNEQIRSEQLSRFWGR--YGIVVVGAAVLVVVGAAGAGIYEYWNTSRASNSGDQFIAAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A +F + + + Y L+ A++L KGD A F + ND A
Sbjct: 69 KLASDNKTDEALKAFADLETSGHGNYPVLAKFRSATLLSQKGDAAGAIAAFTAIGNDTSA 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A ++AA +LVD +Y+++ + + LS M A E LG++A K G KA
Sbjct: 129 PQVFRDTAKVRAAWLLVDNGTYDQVVALAEPLSGEGQTMRASAREALGLAAYKAGDFTKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
K FE++ D +P ++ R+Q++L NI AS +
Sbjct: 189 KQWFEQIVSDAQAPRNVTNRAQIMLDNITASGKA 222
>gi|260460375|ref|ZP_05808627.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259034020|gb|EEW35279.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 221
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ + + + + IL++L A + + E + N G+ F+QAL
Sbjct: 9 EVNDEMRRDQAQKLWDRFG-PALLVAAILVVLGTAAFV-GYRYWDETRANRSGDAFSQAL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L N K D+A ++ +++ Y L+ M A++ +KGD A + F +VA D
Sbjct: 67 KLANDGKNDEALAALDQLEKDGYGAYPLLARMRAATVKASKGDVDAAVKDFDEVAADTAI 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A L+AA +LVD S+ ++S ++ L+ +N + A E LG++A K GK Q A
Sbjct: 127 PQGIRDMARLRAALLLVDHGSFADVSSRVEALTSDTNTLRHTAREALGLAAWKEGKTQDA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+F+++A D+ +P R+ ++ I S +
Sbjct: 187 LKLFDQIASDDGAPRNTRERATLMSELIRGSGNAS 221
>gi|23501278|ref|NP_697405.1| hypothetical protein BR0374 [Brucella suis 1330]
gi|23347165|gb|AAN29320.1| conserved hypothetical protein [Brucella suis 1330]
Length = 223
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K I + + ++L A W + + K + G+ F AL
Sbjct: 9 EVNEELRSERAKQVWRNFGPALIG-VAVAVVLGTAGWV-GYQHWTDSKASASGDKFLAAL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + K D+A ++F + Y L+ + +AS+L KGD A + F +++ D+
Sbjct: 67 DLAAAGKTDEALAAFTDLEKTGYGSYPVLARLRVASVLADKGDAAAAVKAFDEISADNSV 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A
Sbjct: 127 PEPLRNIARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+F+ +A+D +P R+ ++L + ++ +
Sbjct: 187 AKLFKLVAEDGLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|13476157|ref|NP_107727.1| hypothetical protein mlr7403 [Mesorhizobium loti MAFF303099]
gi|14026917|dbj|BAB53513.1| mlr7403 [Mesorhizobium loti MAFF303099]
Length = 221
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ + + + + + IL++L A + + E + N G+ F+QAL
Sbjct: 9 EVNDEMRREQAQKLWDRFGPALLG-IAILVVLGTAAFV-GYRYWDETRANRSGDAFSQAL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L N K DDA ++ +++ Y L+ M A++ +KGDT A + F VA D
Sbjct: 67 KLANDGKNDDALAALDQLEKDGYGAYPLLARMRAATVKASKGDTAAAVKDFDDVAADTAI 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A L+AA +LVD S+ ++S ++ L+ +N + A E LG++A K GK Q A
Sbjct: 127 PQGIRDMARLRAALLLVDHGSFADVSSRVEALTSDTNTLRHTAREALGLAAWKEGKTQDA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+F+++A D+ +P R+ ++ I S +
Sbjct: 187 LKLFDQIAADDGAPRNTRERATLMSELIRGSGNAS 221
>gi|306842333|ref|ZP_07474992.1| Hypothetical protein BIBO2_2108 [Brucella sp. BO2]
gi|306845010|ref|ZP_07477591.1| Hypothetical protein BIBO1_1695 [Brucella sp. BO1]
gi|306274642|gb|EFM56431.1| Hypothetical protein BIBO1_1695 [Brucella sp. BO1]
gi|306287549|gb|EFM59008.1| Hypothetical protein BIBO2_2108 [Brucella sp. BO2]
Length = 223
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ P LI + ++ + + + K + G+ F AL+L
Sbjct: 11 NEELRSERAKQVWRNFGPALIGAAVAVVLGTAGWVGYQHWTDSKASASGDKFLAALDLAA 70
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ K D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +
Sbjct: 71 AGKTDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPL 130
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F
Sbjct: 131 RNIARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAVKLF 190
Query: 186 EELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ +A+D+ +P R+ ++L + ++ +
Sbjct: 191 KLVAEDSLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|161618353|ref|YP_001592240.1| hypothetical protein BCAN_A0382 [Brucella canis ATCC 23365]
gi|254703734|ref|ZP_05165562.1| hypothetical protein Bsuib36_07392 [Brucella suis bv. 3 str. 686]
gi|260567012|ref|ZP_05837482.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261754379|ref|ZP_05998088.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|161335164|gb|ABX61469.1| Hypothetical protein BCAN_A0382 [Brucella canis ATCC 23365]
gi|260156530|gb|EEW91610.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261744132|gb|EEY32058.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 223
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 108/212 (50%), Gaps = 3/212 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ P LI + ++ + + + K + G+ F AL+L
Sbjct: 11 NEELRSERAKQVWRNFGPALIGAAVAVVLGTAGWVGYQHWTDSKASASGDKFLAALDLAA 70
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ K D+A ++F + Y L+ + +AS+L KGD A + F +++ D+ P +
Sbjct: 71 AGKTDEALAAFTDLEKTGYGSYPVLARLRVASVLADKGDAAAAVKAFDEISADNSVPEPL 130
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F
Sbjct: 131 RNIARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLF 190
Query: 186 EELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ +A+D+ +P R+ ++L + ++ +
Sbjct: 191 KLVAEDSLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|163842661|ref|YP_001627065.1| hypothetical protein BSUIS_A0405 [Brucella suis ATCC 23445]
gi|163673384|gb|ABY37495.1| Hypothetical protein BSUIS_A0405 [Brucella suis ATCC 23445]
Length = 223
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ P LI + ++ + + + K + G+ F AL+L
Sbjct: 11 NEELRSERAKQVWRNFGPALIGAAVAVVLGTAGWVGYQHWTDSKASASGDKFLAALDLAA 70
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ K D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +
Sbjct: 71 AGKTDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPL 130
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F
Sbjct: 131 RNIARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKGERFDDAAKLF 190
Query: 186 EELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ +A+D+ +P R+ ++L + ++ +
Sbjct: 191 KLVAEDSLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|225626892|ref|ZP_03784931.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254701189|ref|ZP_05163017.1| hypothetical protein Bsuib55_10067 [Brucella suis bv. 5 str. 513]
gi|254709530|ref|ZP_05171341.1| hypothetical protein BpinB_04507 [Brucella pinnipedialis B2/94]
gi|254713053|ref|ZP_05174864.1| hypothetical protein BcetM6_06734 [Brucella ceti M644/93/1]
gi|254716594|ref|ZP_05178405.1| hypothetical protein BcetM_09268 [Brucella ceti M13/05/1]
gi|254718561|ref|ZP_05180372.1| hypothetical protein Bru83_03299 [Brucella sp. 83/13]
gi|256031024|ref|ZP_05444638.1| hypothetical protein BpinM2_10279 [Brucella pinnipedialis
M292/94/1]
gi|256060516|ref|ZP_05450685.1| hypothetical protein Bneo5_09218 [Brucella neotomae 5K33]
gi|256368831|ref|YP_003106337.1| hypothetical protein BMI_I379 [Brucella microti CCM 4915]
gi|260168156|ref|ZP_05754967.1| hypothetical protein BruF5_07294 [Brucella sp. F5/99]
gi|261218393|ref|ZP_05932674.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261317056|ref|ZP_05956253.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261320758|ref|ZP_05959955.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261324510|ref|ZP_05963707.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261751726|ref|ZP_05995435.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261757614|ref|ZP_06001323.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265983536|ref|ZP_06096271.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265988094|ref|ZP_06100651.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294851759|ref|ZP_06792432.1| hypothetical protein BAZG_00674 [Brucella sp. NVSL 07-0026]
gi|306837297|ref|ZP_07470180.1| Hypothetical protein BROD_0083 [Brucella sp. NF 2653]
gi|225618549|gb|EEH15592.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|255998989|gb|ACU47388.1| hypothetical protein BMI_I379 [Brucella microti CCM 4915]
gi|260923482|gb|EEX90050.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293448|gb|EEX96944.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296279|gb|EEX99775.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261300490|gb|EEY03987.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261737598|gb|EEY25594.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261741479|gb|EEY29405.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|264660291|gb|EEZ30552.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|264662128|gb|EEZ32389.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294820348|gb|EFG37347.1| hypothetical protein BAZG_00674 [Brucella sp. NVSL 07-0026]
gi|306407610|gb|EFM63806.1| Hypothetical protein BROD_0083 [Brucella sp. NF 2653]
Length = 223
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ P LI + ++ + + + K + G+ F AL+L
Sbjct: 11 NEELRSERAKQVWRNFGPALIGAAVAVVLGTAGWVGYQHWTDSKASASGDKFLAALDLAA 70
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ K D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +
Sbjct: 71 AGKTDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPL 130
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F
Sbjct: 131 RNIARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLF 190
Query: 186 EELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ +A+D+ +P R+ ++L + ++ +
Sbjct: 191 KLVAEDSLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|62289365|ref|YP_221158.1| hypothetical protein BruAb1_0400 [Brucella abortus bv. 1 str.
9-941]
gi|82699290|ref|YP_413864.1| hypothetical protein BAB1_0404 [Brucella melitensis biovar Abortus
2308]
gi|189023619|ref|YP_001934387.1| hypothetical protein BAbS19_I03740 [Brucella abortus S19]
gi|237814854|ref|ZP_04593852.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254688682|ref|ZP_05151936.1| hypothetical protein Babob68_00559 [Brucella abortus bv. 6 str.
870]
gi|254693166|ref|ZP_05154994.1| hypothetical protein Babob3T_00550 [Brucella abortus bv. 3 str.
Tulya]
gi|254696809|ref|ZP_05158637.1| hypothetical protein Babob28_03613 [Brucella abortus bv. 2 str.
86/8/59]
gi|254707886|ref|ZP_05169714.1| hypothetical protein BpinM_13191 [Brucella pinnipedialis
M163/99/10]
gi|254729716|ref|ZP_05188294.1| hypothetical protein Babob42_00560 [Brucella abortus bv. 4 str.
292]
gi|256256929|ref|ZP_05462465.1| hypothetical protein Babob9C_06139 [Brucella abortus bv. 9 str.
C68]
gi|260545881|ref|ZP_05821622.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260754158|ref|ZP_05866506.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260757378|ref|ZP_05869726.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761202|ref|ZP_05873545.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883183|ref|ZP_05894797.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261213404|ref|ZP_05927685.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261315377|ref|ZP_05954574.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|297247780|ref|ZP_06931498.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|62195497|gb|AAX73797.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615391|emb|CAJ10360.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189019191|gb|ACD71913.1| hypothetical protein BAbS19_I03740 [Brucella abortus S19]
gi|237789691|gb|EEP63901.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260097288|gb|EEW81163.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260667696|gb|EEX54636.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671634|gb|EEX58455.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674266|gb|EEX61087.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872711|gb|EEX79780.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915011|gb|EEX81872.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261304403|gb|EEY07900.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|297174949|gb|EFH34296.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
Length = 223
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ P LI + ++ + + + K + G+ F AL+L
Sbjct: 11 NEELRSERAKQVWRNFGPALIGAAVAVVLGTAGWVGYQHWTDSKASASGDKFLAALDLAA 70
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ K D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +
Sbjct: 71 AGKTDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPL 130
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD SY+++++ ++ LS NPM A E LG++A K + A +F
Sbjct: 131 RNIARLRAGYLLVDNGSYDDVAERVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLF 190
Query: 186 EELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ +A+D+ +P R+ ++L + ++ +
Sbjct: 191 KLVAEDSLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|148559135|ref|YP_001258405.1| hypothetical protein BOV_0389 [Brucella ovis ATCC 25840]
gi|148370392|gb|ABQ60371.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 223
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + + + ++L A W + + K + G+ F AL
Sbjct: 9 EVNEELRSERAKQVW-RNSGPALIGAAVAVVLGTAGWV-GYQHWTDSKASASGDKFLAAL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + K D+A ++F + Y L+ + AS+L KGD A + F +++ D+
Sbjct: 67 DLAAAGKTDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSV 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A
Sbjct: 127 PEPLRNIARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+F+ +A+D+ +P R+ ++L + ++ +
Sbjct: 187 AKLFKLVAEDSLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|256159078|ref|ZP_05456907.1| hypothetical protein BcetM4_09251 [Brucella ceti M490/95/1]
gi|256254427|ref|ZP_05459963.1| hypothetical protein BcetB_09088 [Brucella ceti B1/94]
gi|261221595|ref|ZP_05935876.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997558|ref|ZP_06110115.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920179|gb|EEX86832.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552026|gb|EEZ08016.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 223
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ P LI + ++ + + + K + G+ F AL+L
Sbjct: 11 NEELRSERAKQVWRNFGPALIGAAVAVVLGTAGWAGYQHWTDSKASASGDKFLAALDLAA 70
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ K D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P +
Sbjct: 71 AGKTDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPL 130
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD SY++++K ++ LS NPM A E LG++A K + A +F
Sbjct: 131 RNIARLRAGYLLVDNGSYDDVAKRVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLF 190
Query: 186 EELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ +A+D+ +P R+ ++L + ++ +
Sbjct: 191 KLVAEDSLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|218661714|ref|ZP_03517644.1| hypothetical protein RetlI_20621 [Rhizobium etli IE4771]
Length = 213
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 2/196 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + ++I +L+++ A LF+ + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGVWRRFG-RYIIVAAVLIVVGTAG-KVLFEYWDDTRSSGAGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A ++ K+ + + Y L+ M A++ KGD A F ++ D+
Sbjct: 69 KLADENKNDEALAALGKLEKEGHGAYPVLARMRAATVQAQKGDANAAITAFNEIGKDNSV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P AVR AA ++A +L++ SYE++S +++++ P N A E LG+++ K G + +A
Sbjct: 129 PAAVRDAARMRAGWLLIENGSYEQVSAAVEEMAVPGNAFRHSAREALGLASYKAGNMAQA 188
Query: 182 KTIFEELAKDNNSPFG 197
+ F + P
Sbjct: 189 RQWFPVDCRRRRKPAS 204
>gi|17987834|ref|NP_540468.1| hypothetical protein BMEI1551 [Brucella melitensis bv. 1 str. 16M]
gi|225851917|ref|YP_002732150.1| hypothetical protein BMEA_A0411 [Brucella melitensis ATCC 23457]
gi|256044099|ref|ZP_05447010.1| hypothetical protein Bmelb1R_06372 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112897|ref|ZP_05453813.1| hypothetical protein Bmelb3E_09470 [Brucella melitensis bv. 3 str.
Ether]
gi|256264571|ref|ZP_05467103.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563457|ref|ZP_05833943.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265990511|ref|ZP_06103068.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994339|ref|ZP_06106896.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17983562|gb|AAL52732.1| hypothetical membrane associated protein [Brucella melitensis bv. 1
str. 16M]
gi|225640282|gb|ACO00196.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|260153473|gb|EEW88565.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262765452|gb|EEZ11241.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001295|gb|EEZ13870.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094936|gb|EEZ18644.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326408415|gb|ADZ65480.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538129|gb|ADZ86344.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 223
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 3/212 (1%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + K ++ P LI + ++ + + + K + G+ F AL+L
Sbjct: 11 NEELRSERAKQVWRNFGPALIGAAVAVVLGTAGWVGYQHWTDSKASASGDKFLAALDLAA 70
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ K D+A ++F + Y L+ + AS+L KGD A + F +++ D+ P
Sbjct: 71 AGKTDEALAAFTDLEKTGYGSYPVLARLRAASVLADKGDAAAAVKAFDEISADNSVPEPS 130
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+A +LVD SY+++++ ++ LS NPM A E LG++A K + A +F
Sbjct: 131 RNIARLRAGYLLVDNGSYDDVAERVEPLSADGNPMRTSAREALGLAAWKAERFDDAAKLF 190
Query: 186 EELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ +A+D+ +P R+ ++L + ++ +
Sbjct: 191 KLVAEDSLAPANARQRANIMLDLMHSAGVAAQ 222
>gi|118588126|ref|ZP_01545536.1| hypothetical protein SIAM614_11133 [Stappia aggregata IAM 12614]
gi|118439748|gb|EAV46379.1| hypothetical protein SIAM614_11133 [Stappia aggregata IAM 12614]
Length = 227
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D K + + W+ + +L+++ + E++ G+ F +A+
Sbjct: 7 EVDEDIRQEKYRRLWDRFG-PWVLGVAVLIVVGTGGYRGWL-YWQEQQSQSAGDTFFEAV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + ++A + + ++ Y L+ + A+ L G T+ A F ++ D
Sbjct: 65 KLSEAQNYEEAAALYGEL-DNALGGYPALAKLRQATDLSNSGKTEEALAEFDALSRDSSI 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A+R A L+AA + VDT SY +I+ ++KL+ + P A E+L +SA K G ++ A
Sbjct: 124 MEALRDVAALRAAYLAVDTQSYGDIADRIEKLTGDTGPFRAAARELLALSAWKAGDIETA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
K + +D +P +S R ++ I +S+
Sbjct: 184 KQWISAIEEDTETPADVSRRVSILGDVIRSSNGEA 218
>gi|110633048|ref|YP_673256.1| hypothetical protein Meso_0691 [Mesorhizobium sp. BNC1]
gi|110284032|gb|ABG62091.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 223
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 2/211 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + + + I L L++L +A W +D + N G+ FAQAL
Sbjct: 9 EVNEELRQDQMRVLWRRYGPIAIG-LAALLVLGMAAWV-AYDHWWTSRANESGDRFAQAL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL +A E++ + Y L+ + A+ L D A F +VAND
Sbjct: 67 ELAEEGNSQEALQLLEELENSGAGAYPVLARLRAATTLADSDDIDGAITKFDEVANDAAV 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+R A L+AA +LVD SY +++ ++ LS +NPM A E + ++A K G + A
Sbjct: 127 PAAIRDVARLRAALLLVDHGSYADVAARVETLSADTNPMRHIARETMALAAWKEGNRENA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
++F E+A D +P G R++M++ I +
Sbjct: 187 LSLFGEIADDEQAPAGARQRAEMMMDLISGT 217
>gi|90418691|ref|ZP_01226602.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336771|gb|EAS50476.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 360
Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K + +A ++++++++ A+ +D + N G+ + AL
Sbjct: 9 EVSEELRQDRVKAIWTRFGTYILAAVILVVVITAAV--VGWDRYQTAQANASGDAYLAAL 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L K D+A ++ + + + Y L+ M I + A+G A F KVA D A
Sbjct: 67 QLARDGKPDEAITALDALAADSYGAYPDLARMSIGGVYQAQGKFDEAVAAFDKVAADAGA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+R A ++AA +LVD + ++ +++L+ S + A E + ++A K + A
Sbjct: 127 PDALRDMAAVRAAYVLVDHGALSDVRSRVERLTGDSEALRFPAREAVALAAWKAEDTETA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+F++L D +P GI +R++++L I A
Sbjct: 187 TMLFQQLVDDPGAPNGIISRARLMLDLIAAG 217
>gi|328544036|ref|YP_004304145.1| hypothetical protein SL003B_2418 [polymorphum gilvum SL003B-26A1]
gi|326413780|gb|ADZ70843.1| hypothetical protein SL003B_2418 [Polymorphum gilvum SL003B-26A1]
Length = 229
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D K + + WI L ++++ + + + K G+ F +A+
Sbjct: 7 EVDEDIRQEKYRRLWDRFG-LWIIVLAVVIVAGTGGY-RGWSYWQQTKAREAGDMFLRAV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L S + +A+ F ++ Y L+ + A+ L G+ + A F +A D
Sbjct: 65 ALAESGQHLEAQELFGRLE-TATGGYPVLARLRGATDLAVAGNPEEAIARFDAIAADRSV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A+L+A + +D+ + + L+ ++ +NP A EIL SA K G A
Sbjct: 124 DSLMRDLASLRAGYLALDSLDHAAVQDRLEGVAGDANPWRFAAREILAFSAWKAGDTAAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANI 209
+ + + D +P +S R ++ I
Sbjct: 184 RDWIDRIVDDAAAPADVSGRVGILNELI 211
>gi|163761003|ref|ZP_02168081.1| hypothetical protein HPDFL43_03169 [Hoeflea phototrophica DFL-43]
gi|162281784|gb|EDQ32077.1| hypothetical protein HPDFL43_03169 [Hoeflea phototrophica DFL-43]
Length = 223
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 2/212 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N+D S K + ++++ + I+++ ++ E G+ F AL
Sbjct: 11 EVNDDLRSDYFKALWAR--FRFVIIGAAIAIVAVTAGLRGWEYWQESTAAKSGDAFLAAL 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL D A + F+++ + + Y L+ M A++L +GD+ A F + D
Sbjct: 69 ELARDGNTDAALAGFQELEATGHGSYPVLARMRAATVLADQGDSAAAISAFSSIGKDASQ 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A+R AA ++AA +LVD SY+++S ++ L+ P N A E LG++A K G + KA
Sbjct: 129 PTAIRDAARMRAAYLLVDHGSYDDVSAEVEVLAVPGNAARHAAREALGLAAFKAGDLAKA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASD 213
F E+ DN +P G++ R+++IL I A
Sbjct: 189 SEWFNEVINDNQTPRGVANRARVILDLIAARG 220
>gi|304391251|ref|ZP_07373195.1| putative tetratricopeptide repeat protein [Ahrensia sp. R2A130]
gi|303296607|gb|EFL90963.1| putative tetratricopeptide repeat protein [Ahrensia sp. R2A130]
Length = 228
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ S + + I L + ++L++++W Y+ + S K+ G+ F A+
Sbjct: 9 EVNDELRSERASEFWKRFG-TIIIALAVAIVLAVSVWRYM-EYSAAKEAAASGDAFMSAV 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K ++A ++ EK+ ++ Y ++ + AS L +G K A + V D++A
Sbjct: 67 ALAEDGKTEEAIAALEKLEAEHGGAYGAMAQLRAASELAKQGQKKEAIAAYDVVVADNMA 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A L+A ++VD + E++S + LS P P A E LG++ K G + KA
Sbjct: 127 DEDLRSIARLRAGYLMVDEGTVEDVSSRVTSLSAPGAPYRSSALEALGLAYFKAGDLDKA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
F+E+AKD N+P I R ++L I A +
Sbjct: 187 FAQFDEIAKDANAPASIGQRVTIMLDVIAARGGPTRD 223
>gi|90423780|ref|YP_532150.1| hypothetical protein RPC_2277 [Rhodopseudomonas palustris BisB18]
gi|90105794|gb|ABD87831.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 217
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K + I + +I++ + + KK G F QA
Sbjct: 7 EVDEELRREQLKRLWDRYSLLIIVGAI--LIIAGVGGWRGYQYFEAKKAAEAGAAFNQAS 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL NK +A + F K+ + Y L+ + A+ + + D + AA+ + ++A D
Sbjct: 65 ELSEQNKHAEAEAVFAKLATTAPAGYRTLARLRNAAEIATR-DPQAAAKAYDEIAADRAV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A ++AA +L++T+SY ++ + L+ + A E+L +SA + G A
Sbjct: 124 PAVDRDLAKVRAAGLLLETASYSDLLQRLEPATTADGTYRHTARELLALSAWRGGDATAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ E ++ D +P + +R+ ++ A + + +
Sbjct: 184 RKWLELISTDAETPSSLRSRADVLQALLPPAAK 216
>gi|85716389|ref|ZP_01047361.1| hypothetical protein NB311A_02311 [Nitrobacter sp. Nb-311A]
gi|85696746|gb|EAQ34632.1| hypothetical protein NB311A_02311 [Nitrobacter sp. Nb-311A]
Length = 217
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E +++ + + + + I +IL+I ++ W + +K F A
Sbjct: 7 EIDDELRREQVQKFWSRY-WALIVAAVILVIAAVGGW-RGYQYLQTQKAAEASSTFEAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L NK +A ++F K+ Y LS A+ A+ DT A +++ +A+D
Sbjct: 65 ALAAQNKHAEAEAAFTKLAETAPSGYRTLSR-LRAAAEAARHDTNAAVKLYDAIASDSGL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A R A + AA +LVDT +Y + L+ + P A E+L +SA G A
Sbjct: 124 SSAERDLARVSAARLLVDTETYNNMLPRLEPATAPEATYRHTARELLALSAWSNGDTTAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ + +++D +P + R++ + A + +
Sbjct: 184 RKWLDMISEDGQTPSSLRRRAEALQALLPPVAK 216
>gi|209885508|ref|YP_002289365.1| hypothetical protein OCAR_6387 [Oligotropha carboxidovorans OM5]
gi|209873704|gb|ACI93500.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 214
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 6/213 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E +++ + K + I + +++I++ A + L+ +K G+ F AL
Sbjct: 7 EIDDELRREQLKKIWDRYSIHII--IAVVLIVAAAGGWRLYQHFETQKAEEAGKAFQSAL 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + A ++FEKI + + Y+ L+ + +A V + D K A + +AND
Sbjct: 65 ALTD---PAQAEAAFEKIAASKARGYSMLARLQVAGEAVKQ-DPKKAIAAYDVIANDGSL 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
VR A ++AA++++DT+SY+EI K LQ + +N A E+L +SA + V+ A
Sbjct: 121 DAPVREIARIRAANLMLDTASYDEIEKRLQGDATGTNTFRHSAREVLALSAWRANNVEAA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ + + D SP + R++ + A + + +
Sbjct: 181 RRWIDMIGNDPQSPATLRRRAEALGALLPTAAK 213
>gi|316933669|ref|YP_004108651.1| hypothetical protein Rpdx1_2327 [Rhodopseudomonas palustris DX-1]
gi|315601383|gb|ADU43918.1| Protein of unknown function DUF2133 [Rhodopseudomonas palustris
DX-1]
Length = 218
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + K +I IL+++ + W ++ K+ FA A
Sbjct: 7 EVDEELRRERLRKLWEKYS-IYIVGAAILIVVGVGAW-RGYEYYEAKQAAEASTAFAAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL NK +A ++F+KI + Y L+ + A+ + + D A + + ++A D
Sbjct: 65 ELAEQNKHAEAEAAFDKIAASAPSGYRMLARLRAAAEVATR-DPALAVKRYDEIAADRRL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A ++AA +++DT++Y ++ + L+ ++ + A E+L +SA + V
Sbjct: 124 PAPYRDLAGIRAAGLVMDTANYNDLVQRLEPIATADSAFRHTARELLALSAWRANNVAAT 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANII 210
+ +++ D +P + +R+ ++ A +
Sbjct: 184 RQWIDKITTDAETPGSLRSRADVLQALLP 212
>gi|92117232|ref|YP_576961.1| hypothetical protein Nham_1684 [Nitrobacter hamburgensis X14]
gi|91800126|gb|ABE62501.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 217
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E +++ + K + +A + +I++ + + +K G F A
Sbjct: 7 EIDDELRREQVKRVWSRYSGLIVAAAI--LIVAAVGGWRGYLYLQTQKSAEAGSAFEAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + NK +A ++F K+ + Y LS + A+ V K D K A +++ +A D
Sbjct: 65 TLADQNKYAEAEAAFTKLAATAPPGYRNLSRLRAAAEAV-KRDPKEAVKLYDAIAADSGF 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A R A ++AA +L+DT +Y + + L+ + P A E+L +SA + A
Sbjct: 124 GSAERDLARVRAAGLLLDTETYNNMLQRLEPATAPQAAFRHTARELLALSAWRANDTTAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ + + +D +P + +R++ + A + +
Sbjct: 184 RKWLDMIGEDGQTPSSLRSRAEALQALLPPVAK 216
>gi|298291069|ref|YP_003693008.1| hypothetical protein Snov_1069 [Starkeya novella DSM 506]
gi|296927580|gb|ADH88389.1| Protein of unknown function DUF2133 [Starkeya novella DSM 506]
Length = 235
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + ++ L +L++L++A W ++ ++ G F AL
Sbjct: 7 EIDEDLRRERFNRLWTRYG-AYVIGLAVLIVLAVAGW-RGYEWWKLQRDQAAGAKFEAAL 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L K +A ++F+ + Y LS A+ L K D A + +A D
Sbjct: 65 QLAADGKAAEAEAAFQALEKDGTSGYRVLSRFRAATELA-KTDAAKAVAEYDSLAKDPSI 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ A ++AA +LVDT+ ++ ++ L P A EI+G++ K G + A
Sbjct: 124 SPLMQNVAQVRAALLLVDTAPLADVEGRMKPLDTPEGAFRHSAREIIGLAQYKAGDFKAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMI 205
F + D +P G+ R++++
Sbjct: 184 TDTFSAILNDGQTPPGLRRRAELM 207
>gi|114704715|ref|ZP_01437623.1| hypothetical protein FP2506_07261 [Fulvimarina pelagi HTCC2506]
gi|114539500|gb|EAU42620.1| hypothetical protein FP2506_07261 [Fulvimarina pelagi HTCC2506]
Length = 390
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K + ++ +LI+++ + A + + + N G+ + A
Sbjct: 9 EVSEELRQDRLKSIWTRFGTAIVSVVLIVILATGA--YVGWQRYSIAQANATGDRYLAAQ 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L +D A +F I + Y L+ M IA+ G ++A + VAND
Sbjct: 67 DLVREGDIDGAIEAFRAIAEDGSGAYPELAQMSIANAEAEAGRNEDAIASYEAVANDSSV 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P ++R A L+AA +LVD S +++ ++L+ NP+ A + +G++A K G + A
Sbjct: 127 PESLREMADLRAAYLLVDHGSLDDVRARAERLTGDDNPLRYAARDAIGLAAWKAGDTETA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANI 209
+ +++ + + ++P GIS R+ +I +
Sbjct: 187 RDLYQSILEAGDAPNGISQRAGLITGLL 214
>gi|91977475|ref|YP_570134.1| hypothetical protein RPD_3007 [Rhodopseudomonas palustris BisB5]
gi|91683931|gb|ABE40233.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 217
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K K Y ++I++ + ++ KK G F A
Sbjct: 7 EVDEEVRREQLKRLWEK--YSIFIVAGAILIIAGVGAWRGYEYYEAKKAAEAGAAFTAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L NK +A ++F KI + + Y L+ + A+ + + D K A +++ +A D
Sbjct: 65 DLAEQNKHAEAEAAFNKIAATTSTGYRTLARLRAAAEVAQR-DPKEAVKLYDAIAADRSV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R AT++AA +L+D++ Y ++ + L+ +S + A E+L +SA + V
Sbjct: 124 PAQDRDLATIRAAQLLMDSAGYTDLQQRLEPISGANGAYRHTAREMLALSAWRANNVAAT 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ E + D +P + R++++ A + + +
Sbjct: 184 RQWIEMINTDAETPASLRNRAEVLQALLPPAAK 216
>gi|39936160|ref|NP_948436.1| hypothetical protein RPA3097 [Rhodopseudomonas palustris CGA009]
gi|39650015|emb|CAE28538.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 229
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 100/209 (47%), Gaps = 3/209 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K K + +L+++ + W ++ KK G FA A
Sbjct: 18 EVDEELRRERLKRLWDKYSLVIVGG-ALLIVVGVGAW-RGYEYYEAKKAAEAGAAFAAAA 75
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L NK +A ++F+KI + Y L+ + A+ + + D + A + + ++A D
Sbjct: 76 DLAEQNKHAEAEAAFDKIAASAPAGYRTLARLRAAAEIGTR-DAQAAVKRYDEIAADRSL 134
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A+++AA+++++T+SY ++ + L+ ++ + A E+L +SA + V
Sbjct: 135 AAPFRELASIRAANLVLETASYNDLVQRLEPVASGNGAFRHTARELLALSAWRANNVAAT 194
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANII 210
+ +++ D +P + +R+ ++ A +
Sbjct: 195 RQWIDKITTDAETPGSLRSRADVLQALLP 223
>gi|158425954|ref|YP_001527246.1| hypothetical protein AZC_4330 [Azorhizobium caulinodans ORS 571]
gi|158332843|dbj|BAF90328.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 238
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + + L ++ +++ + + +++ F A+
Sbjct: 7 EIDEDLRRERLSRLWNR--FGIYVILFVVAVIAGTAAYSGWRWWQQREAQATSVRFEAAV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + K +A ++F + Y L+ A+ L + D A F +A D
Sbjct: 65 KLADEGKHQEAEAAFNALAKDAPAGYRALARFRAATELATR-DKAAAVAAFDTLAADTGL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A R A ++AA ILVDT + ++ + +Q L++ ++P+ A E++ +S K G ++ A
Sbjct: 124 TAAERDLARIRAAMILVDTGAVADVKQRVQALADGTSPLRHSARELIALSQYKAGDLKGA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMI 205
T + +D +P+G+ +R+++I
Sbjct: 184 NTTASLILEDQETPYGVRSRAELI 207
>gi|299133683|ref|ZP_07026877.1| Protein of unknown function DUF2133 [Afipia sp. 1NLS2]
gi|298591519|gb|EFI51720.1| Protein of unknown function DUF2133 [Afipia sp. 1NLS2]
Length = 214
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + K + +I +LI++I+ + + +K G+ F A+
Sbjct: 7 EIDEDLRREQLKKLWDRYSLHFI--VLIVLIVGGVGGWRAYQYFENQKAEAAGKAFEAAV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + A+++F+KI S + + Y+ L+ ++ A+ + D++ F VAND
Sbjct: 65 ALTD---PAQAQAAFDKIASSNAQGYSTLARLHAAAEAAKQ-DSQKGIAAFDAVANDGKV 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A L+AAS+L+DT+ Y +I K L + ++ A E+L +SA + A
Sbjct: 121 EAPIREIARLRAASLLLDTAPYADIEKRLSDDASGTHTFRHSARELLALSAWRAKNNDAA 180
Query: 182 KTIFEELAKDNNSPF 196
+ + + D SP
Sbjct: 181 RKWLDMIGDDPQSPA 195
>gi|192291878|ref|YP_001992483.1| hypothetical protein Rpal_3507 [Rhodopseudomonas palustris TIE-1]
gi|192285627|gb|ACF02008.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 218
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 100/209 (47%), Gaps = 3/209 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K K + +L+++ + W ++ KK G FA A
Sbjct: 7 EVDEELRRERLKRLWDKYSLVIVGG-ALLIVVGVGAW-RGYEYYEAKKAAEAGAAFAAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L NK +A ++F+KI + Y L+ + A+ + + D + A + + ++A D
Sbjct: 65 DLAEQNKHAEAEAAFDKIAASAPAGYRTLARLRAAAEIGTR-DAQAAVKRYDEIAADRSL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A+++AA+++++T+SY ++ + L+ ++ + A E+L +SA + V
Sbjct: 124 AAPFRELASIRAANLVLETASYNDLVQRLEPVASGNGAFRHTARELLALSAWRANNVAAT 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANII 210
+ +++ D +P + +R+ ++ A +
Sbjct: 184 RQWIDKITTDAETPGSLRSRADVLQALLP 212
>gi|296284227|ref|ZP_06862225.1| hypothetical protein CbatJ_11411 [Citromicrobium bathyomarinum
JL354]
Length = 267
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E ++ + + + + +I +++L +L+ A + F G E + E AL
Sbjct: 30 EVDDAVRTDQYRHVWTRYG-IYIIGVVLLGLLAFAAVLF-FSGQSEGNRESESETLVTAL 87
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + LD A + + + M A I + +G K AAE+F +VA D+
Sbjct: 88 DQVEAGNLDQADEALAPLAEDGRGGGKTQAQMLRAGIALEQGRAKEAAELFGQVAADEDV 147
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P ++R A L+A D+ E+ + L L++P P + A EIL ++ L+ G ++A
Sbjct: 148 PQSIRDLAELRAVVAGYDSMKPAEVIRRLTPLAQPDQPYYGSAGEILAMAYLEGGDKERA 207
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+F E+A D++ P I R++ + A+++ D
Sbjct: 208 GKLFGEIAMDDDVPDTIRGRARQM-ASVLGVDAV 240
>gi|27379161|ref|NP_770690.1| hypothetical protein blr4050 [Bradyrhizobium japonicum USDA 110]
gi|27352311|dbj|BAC49315.1| blr4050 [Bradyrhizobium japonicum USDA 110]
Length = 217
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K K + L++L++ ++ W + KK G F +A+
Sbjct: 7 EVDEEVRREQLKKLWEKYS-IYFIALMVLIVAAVGGW-RGYQYLEAKKAAEAGAAFEKAV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL +K +A ++F ++ ++ Y L+ + A+ ++ D K AA+++ +A D
Sbjct: 65 ELSEQDKHAEAETAFTELAAKAPSGYRTLARLRAAAEAASR-DPKAAAKMYDDIAADRGV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A ++AA +LVD++SY ++ + L+ + P + A E+L +SA + A
Sbjct: 124 GGEWQDLAKIRAAGLLVDSASYADMQQRLEASATPKSTFRHSARELLALSAWRNNDTTAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ + +A+D +P G+ +R++ + A + +
Sbjct: 184 RKWLDAIAEDGETPPGLRSRAEALQALLPPVAK 216
>gi|146340693|ref|YP_001205741.1| hypothetical protein BRADO3744 [Bradyrhizobium sp. ORS278]
gi|146193499|emb|CAL77515.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 217
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K + +I + +L+I + W + +K G F +AL
Sbjct: 7 EVDEEVRREQLKKLWDRYS-IFIIAVAVLIIAGVGGW-RGYQYLEAQKAAEAGAAFNKAL 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL NK +A +F + + Y L+ + A+ + D A +++ +A D
Sbjct: 65 ELSEQNKHAEAEKAFADVAATAPSGYRMLARFHQAAEAAVR-DKAAAVKLYDDLAADRGI 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A L+AA +LVDT+ Y ++ L+ + P A E+L +SA K A
Sbjct: 124 GAEQQSMARLRAAGLLVDTAPYADLKPRLEGETAAGAPFRHAARELLALSAWKANDAAAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ + +A D +P G+ +R++ + A + A +
Sbjct: 184 RQWLDMIALDGETPPGLRSRAEALQALLPAVAK 216
>gi|86749566|ref|YP_486062.1| hypothetical protein RPB_2446 [Rhodopseudomonas palustris HaA2]
gi|86572594|gb|ABD07151.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 217
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K K Y ++I++ + + KK G F A
Sbjct: 7 EVDEEVRRERLKQLWDK--YSLFIIAGAILIIAGVGGWRGYQYYEGKKAAETGAAFTAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L NK +A ++F I + + Y L+ + A+ + + D K A +++ +A D
Sbjct: 65 DLAEQNKHAEAEAAFNNIAATASGGYRTLARLRAAAEVAQR-DPKEAVKVYDAIAADRSV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A+L+AA L+D+ Y ++S+ L+ ++ A E+L +SA + G V A
Sbjct: 124 PAQDRDLASLRAAQFLMDSVGYADLSQRLEPIAGADAAYRHTAREMLALSAWRAGNVAAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ E++ D +P + R++++ A + + +
Sbjct: 184 RQWIEQINTDAGTPASLRNRAEVLQALLPPAAK 216
>gi|254503672|ref|ZP_05115823.1| hypothetical protein SADFL11_3711 [Labrenzia alexandrii DFL-11]
gi|222439743|gb|EEE46422.1| hypothetical protein SADFL11_3711 [Labrenzia alexandrii DFL-11]
Length = 225
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D K + + W+ + +L+++ + + + G+ F +A+
Sbjct: 7 EVDEDIRHEKYRRLWDRFG-SWVIAVAVLIVVGTGGYRGWL-YWQDTQSQSAGDTFLEAV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + + +A + ++ S Y L+ M A+ GD A F ++ D
Sbjct: 65 SLSEAGQYSEASQLYTELGSSI-GGYPALAQMRQATDKANAGDATAALAEFDALSRDSNL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A++ A L+AA I VD+ Y+ I+ ++ L+ ++ A E+L +SA K G + A
Sbjct: 124 APALQNVAALRAAYIAVDSEPYDAIADRIESLTGDTDAFRAAARELLALSAWKNGDAETA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIA 211
T L D +P I R ++ I
Sbjct: 184 LTWITALEDDAETPQDIRQRVTLLGGLIRG 213
>gi|85708007|ref|ZP_01039073.1| hypothetical protein NAP1_02190 [Erythrobacter sp. NAP1]
gi|85689541|gb|EAQ29544.1| hypothetical protein NAP1_02190 [Erythrobacter sp. NAP1]
Length = 256
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 3/212 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + K K L I ++L+ FY +DG +E E AL
Sbjct: 26 EIDEAVRQDDTKEFFQKYGVP--LGLAISLLLAGMFGFYFWDGRNEAALERQSEQIISAL 83
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + N + A + ++ + + + A+ + +G+ A E++ +A D
Sbjct: 84 DSVDVNDFEGASEKVDGLVDEGSIGARTSAKFLQAAAALEEGNPAKAVELYASIAADPET 143
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A ++ S D ++ L L+ P NP A E+ I+ L+ G +A
Sbjct: 144 PGPLRNLAVIREVSTNFDERDPADVIAKLSDLAVPGNPYFGSAGELTAIAHLEAGNRDEA 203
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASD 213
+F E+A D P + +R++ + A ++ D
Sbjct: 204 GALFAEMANDEALPETLRSRARQM-AGLLGVD 234
>gi|75676212|ref|YP_318633.1| hypothetical protein Nwi_2022 [Nitrobacter winogradskyi Nb-255]
gi|74421082|gb|ABA05281.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 217
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 94/213 (44%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E +++ + K G+ Y + ++++L + + +K F A
Sbjct: 7 EIDDELRRERLKKIWGQ--YSALIIAAVILVLVAVGGWRGYQYLQTQKAAEASSAFEAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + NK +A+++F K+ Y LS A+ A+ D A +++ +A +
Sbjct: 65 ALADQNKHAEAQAAFAKLAETAPLGYRNLSR-LRAAAEAARHDINAAVKLYDAIATEGGF 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A ++AA++LVD+ +Y + + L+ + P A E+L +SA + A
Sbjct: 124 SSVERDFARVRAAALLVDSETYNNMLQRLEPAAAPEATFRHSARELLALSAWRSDDATAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ + +++D+ +P + R++ + A + +
Sbjct: 184 RKWLDMISEDSQTPSSLRGRAEALQALLPPVAK 216
>gi|83310441|ref|YP_420705.1| hypothetical protein amb1342 [Magnetospirillum magneticum AMB-1]
gi|82945282|dbj|BAE50146.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 227
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + K + + L ++ + + G K++ +++
Sbjct: 16 EVDEDLRQEELNRLWKK--HGGLFAAAALALVLAVAGWQGWQGWEAKQRQAASARYSETA 73
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K D+A K+ ++ K Y L+++ A + GD AA ++ K+A D
Sbjct: 74 ALIEQGKKDEAVEVLNKLSAEGPKGYRLLADLRKADMAQQAGDFTGAAALYGKIAADTSV 133
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R +T++AA +++D+ I K ++ L+ ++ A EIL ++ALK G+ +A
Sbjct: 134 DKVYRDMSTIRAAYLVLDSGDVAAIEKSVEPLAAEASSWRHSAREILALAALKRGETPRA 193
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+F ++A+D +P G+ TR+ +LA A+ QR +
Sbjct: 194 AELFAKIAEDAAAPQGLRTRAAEMLA---ATGQRAR 226
>gi|312114897|ref|YP_004012493.1| hypothetical protein Rvan_2169 [Rhodomicrobium vannielii ATCC
17100]
gi|311220026|gb|ADP71394.1| hypothetical protein Rvan_2169 [Rhodomicrobium vannielii ATCC
17100]
Length = 239
Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + K Y + L+I + + G+ A+
Sbjct: 10 EVNEEHRRRQTAVFFKK--YGIYIGIAALVIAAGVGGYKWDQARRAADAARGGDALVTAI 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K +A + + Y L+ ++ AS +A+ AAE + VA+D+ A
Sbjct: 68 TLHEDGKEAEAEKALADLAGSGPGAYRVLARLHAASESLAQKKYDQAAEDYRGVASDENA 127
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P +R A +Q A++ VD SYE +S+ L ++ A ++LGI+A K GK +A
Sbjct: 128 PATLRDFARVQIAALSVDKESYESLSQTLAPYRSGTSEWRFAAKDVLGIAAFKEGKRDEA 187
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANI 209
+ IF E+A D +P G+ R+Q++LA +
Sbjct: 188 ERIFGEIASDGAAPAGMRQRAQIMLALL 215
>gi|115525348|ref|YP_782259.1| hypothetical protein RPE_3347 [Rhodopseudomonas palustris BisA53]
gi|115519295|gb|ABJ07279.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 217
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + K + IA ++I++ + + KK G F A
Sbjct: 7 EVDEDLRREQLKKLWDRYSLLIIACA--VLIIASVGGWRGYQYFEAKKAAEAGAAFNAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L NK +A ++F K+++ Y L+ + +A+ + A+ DT A+ F ++A D
Sbjct: 65 DLAEQNKHAEAEAAFAKLMATAPSGYRTLARLRLAAEIAAR-DTTAGAKAFDEIAADSAV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A L+AA++L++T+SY ++ + L+ + + A E+L +SA + G A
Sbjct: 124 PAVDREVAKLRAATLLLETASYPDMVQRLEPSAAATGTFRHSARELLALSAWRTGDAAAA 183
Query: 182 KTIFEELAKDNNSPFGISTR 201
+ E +A D +P + R
Sbjct: 184 RKWLELIATDAETPSSLRQR 203
>gi|283856260|ref|YP_162184.2| hypothetical protein ZMO0449 [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775255|gb|AAV89073.2| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 254
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 18 KCCYKWIAP-LLILMILSLAIWFYLFDGSHEKKK-NIVGENFAQALELFNSNKLDDARSS 75
+C IA LL++ + + W Y H+++ N G+ A A+ ++
Sbjct: 40 RCITAAIAVILLVVGVGGIGCWSY---HRHKQEAINSRGDALAAAIAPVIQGGQVKDVAT 96
Query: 76 FEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135
+K+++ ++ +Y L A IL KGD K+A ++ V ND A + ATL ++
Sbjct: 97 LDKLIASNDPVYANLGRFLKAGILSDKGDVKSATALYQTVLNDPAAGDILHAVATLHLSA 156
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
I +DT E + K LQ L P + A E+ + LK K ++A I++ + D + P
Sbjct: 157 IELDTVPPENVIKRLQPLVAPGSRWLGSAGEMQAAAYLKENKPEQAVKIYQRIYSDTSVP 216
Query: 196 FGISTRSQMI 205
I R++ +
Sbjct: 217 EDIRERAKSL 226
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 52 IVGENFAQALEL------FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
G+ L ++ ++ + +++ ++ M A+ L +
Sbjct: 141 AAGDILHAVATLHLSAIELDTVPPENVIKRLQPLVAPGSRWLGSAGEMQAAAYL-KENKP 199
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQA 133
+ A +I+ ++ +D P +R A A
Sbjct: 200 EQAVKIYQRIYSDTSVPEDIRERAKSLA 227
>gi|241760998|ref|ZP_04759087.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241374617|gb|EER64078.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 254
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE 77
+C IA +L+++ + + E N G+ A A+ ++ +
Sbjct: 40 RCITAAIAVILLVVGVGGIGCWSYHRHKQE-AINSRGDALAAAIAPVIQGGQVKDVATLD 98
Query: 78 KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
K+++ ++ +Y L A +L KGD K+A ++ V ND A + ATL ++I
Sbjct: 99 KLIASNDPVYANLGRFLKAGVLSDKGDVKSATALYQTVLNDPAAGDILHAVATLHLSAIE 158
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
+DT E + K LQ L P + A E+ + LK K ++A I++ + D + P
Sbjct: 159 LDTVPPENVIKRLQPLVAPGSRWLGSAGEMQAAAYLKENKPEQAVKIYQRIYSDTSVPED 218
Query: 198 ISTRSQMIL---ANIIASDQR 215
I R++ + A+I+ +++
Sbjct: 219 IRERAKSLANSYADIVGNNKE 239
>gi|260753036|ref|YP_003225929.1| hypothetical protein Za10_0798 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552399|gb|ACV75345.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 254
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE 77
+C IA +L+++ + + E N G+ A A+ ++ +
Sbjct: 40 RCITAAIAVILLVVGVGSIGCWSYHRHKQE-AINSRGDALAAAIAPVIQGGQVKDVATLD 98
Query: 78 KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
K+++ ++ +Y L A +L KGD K+A ++ V ND A + ATL ++I
Sbjct: 99 KLIASNDPVYANLGRFLKAGVLSDKGDVKSATALYQTVLNDPAAGDILHAVATLHLSAIE 158
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
+DT E + K LQ L P + A E+ + LK K ++A I++ + D + P
Sbjct: 159 LDTVPPENVIKRLQPLVAPGSRWLGSAGEMQAAAYLKENKPEQAVKIYQRIYSDTSVPED 218
Query: 198 ISTRSQMIL---ANIIASDQR 215
I R++ + A+I+ +++
Sbjct: 219 IRERAKSLANSYADIVGNNKE 239
>gi|46201386|ref|ZP_00055151.2| COG2976: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 227
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + K + ++ + + G K++ + +
Sbjct: 16 EVDEDLRQEELNRLWKKHGGLLSLAAV--ALVLAVAGWQAWQGWDAKQRQAASARYLETS 73
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K D+A K+ ++ K Y L+++ A + + GD AA ++ KVA D
Sbjct: 74 SLIEQGKKDEAAEVLGKLSAEGPKGYRLLADLRRADMALQAGDAAGAAALYGKVAADTSV 133
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A ++AA + +D + + K ++ L+ ++P A EIL ++ALK G+ +A
Sbjct: 134 DKVYRDMAVIRAAYLTLDGGDFATMEKSVEPLAAEASPWRHSAREILALAALKRGETPRA 193
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+F ++A+D +P G+ TR+ +LA A+ QR +
Sbjct: 194 AELFAKIAEDAAAPQGLRTRAAEMLA---ATGQRAR 226
>gi|148255172|ref|YP_001239757.1| hypothetical protein BBta_3774 [Bradyrhizobium sp. BTAi1]
gi|146407345|gb|ABQ35851.1| hypothetical protein BBta_3774 [Bradyrhizobium sp. BTAi1]
Length = 217
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K + IA + +I++ + + + KK G F +A+
Sbjct: 7 EVDEEVRREQLKRLWDRYSIFIIAIAV--LIIAGVGGWRGYQYAEGKKAAEAGSAFNKAI 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL NK ++A +F ++ + Y L+ + A+ + D A ++ ++A D
Sbjct: 65 ELSEQNKREEAEKAFAEVAATAPAGYRMLARFHQAAEAAGR-DKAAAVRLYDELAADRSI 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A L+AA +LVDT+ Y ++ + L+ + P A E+L +SA K A
Sbjct: 124 GAEQQSMARLRAAGLLVDTAPYPDLKQRLEGEAASGAPFRHAARELLALSAWKANDAAAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ + +A D +P G+ +R++ + A + A +
Sbjct: 184 RQWLDMIALDGETPPGLRSRAEALQALLPAVAK 216
>gi|87198965|ref|YP_496222.1| hypothetical protein Saro_0943 [Novosphingobium aromaticivorans DSM
12444]
gi|87134646|gb|ABD25388.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
12444]
Length = 253
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E ++ + + K K + +I +L LA W ++ + GE +AL
Sbjct: 29 EVDDALREDQVFTAVQKYG-KPVGAAIIAGLLGLAGWL-WYENHNNAVAGEQGEVLTKAL 86
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + L A + N+ Y S M A IL +G T AA+ F +A D A
Sbjct: 87 DQLETRNLKAAADELGPLAKDGNEGYRATSRMLEAGILAEQGKTAEAAKAFAAIAADGGA 146
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A R AT++ ++ D + +++ + L+ L+ P N A E++G++ LK GK A
Sbjct: 147 PQAYRDLATIREVALDFDKLAPDKVVERLKPLAVPGNAWFGNAGELVGVAYLKQGKNDLA 206
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+F ++AK+ P + R++ + A ++ D
Sbjct: 207 GALFAQIAKEKTVPDSLRRRARQM-AGMLGVDAV 239
>gi|170740823|ref|YP_001769478.1| hypothetical protein M446_2605 [Methylobacterium sp. 4-46]
gi|168195097|gb|ACA17044.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 236
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 5/211 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N D + + + +L+++ + W + + + F +A+
Sbjct: 9 EVNEDYRRDRAAEIWKRYS-GVFIGIAVLVVIGVGGW-RFWQHEQQVQAEAASRRFDEAV 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
K +A +FE + + Y L+ A+ K D A + +A D
Sbjct: 67 RASKD-KGGEAAKAFETLAADSPHGYRILAQFRAAAE-AGKADPAAGARAYAAIAADTGV 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R AA L+ A + +D+ E + LQ L+ N A E+LG++A++ G + A
Sbjct: 125 GPGLRDAARLRGALLRLDSDDPEAL-NTLQGLAASGNAFRHTAREMLGLTAMRKGDFEGA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
F+++A D +P G+ R ++ +A
Sbjct: 184 GRWFDQIAADRETPPGLRQRLEVYVALAAGG 214
>gi|220924492|ref|YP_002499794.1| hypothetical protein Mnod_4624 [Methylobacterium nodulans ORS 2060]
gi|219949099|gb|ACL59491.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 236
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 5/211 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + + + +L++L + W + + + F +A+
Sbjct: 9 EVNEEYRRDRAAEIWKRYS-GVFIGIAVLVVLGIGGW-RFWQHEQQVQAEAASRRFDEAV 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
K DA +FE + + Y L+ A+ K + A+ + +A+D+
Sbjct: 67 RTAKD-KGADAAKTFEAVAADAPGGYRVLAR-LRAAAEAGKVEPAAGAKAYAAIADDNAV 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A L+ A + +D E + LQ L+ P+N A E+LG+SAL+ G A
Sbjct: 125 GQGLRDVARLRGALLRLDADDPEAL-NTLQGLATPTNAFRHTAREMLGLSALRKGDFDGA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
F+++A D +P G+ R ++ +A +
Sbjct: 184 GRWFDQIAADRETPQGLRQRLEVYIALVAGG 214
>gi|332185317|ref|ZP_08387066.1| hypothetical protein SUS17_235 [Sphingomonas sp. S17]
gi|332015041|gb|EGI57097.1| hypothetical protein SUS17_235 [Sphingomonas sp. S17]
Length = 222
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 89/216 (41%), Gaps = 3/216 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E +++ + + + + ++L+ L+ + + ++ GE A
Sbjct: 3 EVDDELRRERLTSFWTR--WGLVIGAVLLIGLAAFGGYLYWQHRQHEQAGADGEQLQAAY 60
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + + A++ + + Y L++ A IL+ + D K AA F +AND
Sbjct: 61 DALGQSDVKTAQAKLAPLAQSNVDAYRALASFTQADILLQRNDLKGAAARFAAIANDASL 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A ++ DT E + L ++ P N A E++ ++ L+ K +A
Sbjct: 121 AQPFRDLALVRQTMAEYDTLKPEAVISRLGSMAVPGNAWFGSAGEMVAVAYLRQNKRAQA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+F ++A D + P + R+ + +A ++ D +
Sbjct: 181 GRLFGQIASDKDVPDTLRQRA-VQMAGVLGVDAVGQ 215
>gi|218507875|ref|ZP_03505753.1| hypothetical protein RetlB5_09820 [Rhizobium etli Brasil 5]
Length = 160
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + ++I IL+++ A L+D + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGAWRRFG-RYIIVAAILIVVGTAG-KVLYDYWDDTRSSGAGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + NK D+A ++ +K+ + + Y L+ M A++ KGD A F ++ D+
Sbjct: 69 KLADENKNDEALAALDKLEKEGHGAYPVLARMRAATVQAQKGDANAAIAAFNEIGKDNGV 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKL 153
P AVR AA ++A +L++ SYE++S ++++
Sbjct: 129 PAAVRDAARMRAGWLLIENGSYEQVSAAIEEM 160
>gi|114569752|ref|YP_756432.1| hypothetical protein Mmar10_1201 [Maricaulis maris MCS10]
gi|114340214|gb|ABI65494.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 261
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 92/208 (44%), Gaps = 3/208 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + K + + + + A L +++ ++ + FD + + F A+
Sbjct: 7 EVDEELRRDKYQDLLRQ--WGPWALGAALAVIAGSVAWQSFDAWQTGGRQTASDAFIAAM 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
S +L A + E + Y L+ + ++ + +GD A F + A
Sbjct: 65 THSESGELALAAAGLETLAENGTPGYVSLALIQRGNVAIEQGDNAAATGFFEQAAAQASD 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
PL +R A ++A D+ S+ +I L +L +P A E + +AL+ +++A
Sbjct: 125 PL-LRDMAEIRAVWSSWDSLSFSDIDLRLSRLVNADSPYRHIARETIAAAALRADNIERA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANI 209
+T ++ L+ +++P G+ R+Q +A I
Sbjct: 184 RTQYQFLSFSSDAPAGVQRRAQEAMALI 211
>gi|254420734|ref|ZP_05034458.1| hypothetical protein BBAL3_3044 [Brevundimonas sp. BAL3]
gi|196186911|gb|EDX81887.1| hypothetical protein BBAL3_3044 [Brevundimonas sp. BAL3]
Length = 248
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
+ + S + K + + +++++ L A+ ++ +D + K E + + +
Sbjct: 7 QVEEELRSD--RYKRLARTWLPVVGVILVVALVAALGWWGWDSLNSSKAAKGAEAYDRGM 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E + K +AR +FE+ + + N Y L+ A + V +A +F + A
Sbjct: 65 EALRAEKPAEARLAFEETVKEGNDAYKVLALQQQAGLAVTADKIPDAVRLFDQAAKTSSD 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P + A +AA +++DT+ +I L L+E P+H FA E L ++ L+ GK ++A
Sbjct: 125 P-ILSDPAAFKAALLIMDTAPLADIEARLTPLAEDKRPLHAFAQEALALARLQHGKTKEA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ F L + P + R+ + +A I A
Sbjct: 184 REAFVLLQLGQDVPDDVRQRANIAVATIDAG 214
>gi|114328957|ref|YP_746114.1| hypothetical protein GbCGDNIH1_2293 [Granulibacter bethesdensis
CGDNIH1]
gi|114317131|gb|ABI63191.1| hypothetical membrane associated protein [Granulibacter
bethesdensis CGDNIH1]
Length = 227
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG------- 54
E D + + K + + L++L+IL A W H +
Sbjct: 12 EVEEDLRAERAKKLLVRYG-GPAVGLVLLVILGAAGWQGWLWYKHRQDATAAERFLALTR 70
Query: 55 ---ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ A + + K + A ++F K + Y L+ + A++L A G+ K A I
Sbjct: 71 NPVDPLAPPVHIVPDAKTEQALTAFAK---DSPENYATLARLRAAALLTAGGNKKGAEAI 127
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
+ V+ND+ A A+R ATLQ+ +D + L L NP FA E +
Sbjct: 128 YGTVSNDNAALPALRDLATLQSVWNRIDDGDPATLRGQLAPLLADGNPWQPFAREGTALL 187
Query: 172 ALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
++ G++ A+ + L++D N+P G+ R+ +LA
Sbjct: 188 DIRQGRMDDARRGLQTLSQDENAPPGVRNRATGLLA 223
>gi|149186033|ref|ZP_01864348.1| hypothetical protein ED21_24906 [Erythrobacter sp. SD-21]
gi|148830594|gb|EDL49030.1| hypothetical protein ED21_24906 [Erythrobacter sp. SD-21]
Length = 259
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY 87
++ + L+ + +D E GE L+ + +D A + + +
Sbjct: 53 VVALGLAAFGGYLYWDQQQESTMERSGEELVTILDQLEAGNIDTATGQLDGFDGEGSPAI 112
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
+ + + A I +G+T+ AA +F +VA+D+ AP A+R A ++ +++ D +E+
Sbjct: 113 S--AKLLRAGIAADEGETQKAATLFGEVADDENAPEALRNLALVRRTALMFDEMGPDEVI 170
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI-L 206
++ L+ P P A E++ + L K +A +F E+A+D N+P R++M+ +
Sbjct: 171 AAMKPLAVPGEPFFTSAGELVAHAYLAQDKRAEAGALFAEIARDENTPE--VARARMLNM 228
Query: 207 ANIIASDQRN 216
A I+ D +
Sbjct: 229 AGILGVDAVD 238
>gi|94495670|ref|ZP_01302250.1| hypothetical protein SKA58_06460 [Sphingomonas sp. SKA58]
gi|94425058|gb|EAT10079.1| hypothetical protein SKA58_06460 [Sphingomonas sp. SKA58]
Length = 232
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 83/214 (38%), Gaps = 4/214 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E ++ + + + + +L++ + + W Y + + V E L
Sbjct: 14 EVDDAVRQDQLTTFWQRYG-RILIVVLVVGLAAFGGWLYWQHH-QKTQSEAVSEQMDTLL 71
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ D + Y + + A + KGD K A + +A DD
Sbjct: 72 DTAVGGGTPD-PKQLAALTKASQPGYRASALLVQAGVAARKGDAKAAIAAYRAIAADDSL 130
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A ++ S+ D+ E++ L+ L+ P A E++ ++ +K GK A
Sbjct: 131 DQPYRDLALIRQTSLEFDSLKPEQVVDRLKPLAVEGAPWFGSAGELVAVAYMKMGKNDLA 190
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+F +AKD+ P I +R++ + A ++ D
Sbjct: 191 GPMFAAMAKDDKVPQSIRSRARQM-AGVMGIDAV 223
>gi|326386675|ref|ZP_08208297.1| hypothetical protein Y88_2569 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208990|gb|EGD59785.1| hypothetical protein Y88_2569 [Novosphingobium nitrogenifigens DSM
19370]
Length = 262
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 87/181 (48%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
A + I+++L+ + + GE A AL+ + + D AR+S +I +
Sbjct: 63 AGMAIVLVLAGVGGWLAWTNHVATLTGQRGEQMAIALDQVEAGRYDAARTSLAQIAATGG 122
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
+ S + I + + + +AA+ F VA D AP R AT++ + DT +
Sbjct: 123 AGFRAASQLVTGGIALDQHKSADAAKAFGAVAADGSAPQVYRDLATVREVAAQFDTMQPQ 182
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
++ L+ L+ P NP A E+LG++ +K GK +A ++F +AKD + P + R +
Sbjct: 183 QVVDRLKPLAVPGNPWFGSAGEMLGVAYMKMGKNDQAASLFAAIAKDKSVPDSLRGRIRQ 242
Query: 205 I 205
+
Sbjct: 243 L 243
>gi|144898967|emb|CAM75831.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 227
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E ++D + K +I + ++L++A H + F +A
Sbjct: 16 EVDDDLRQENLEKAWKKYGGLFIGG-AVAIVLAVAGAQAWQTWRHGQNLQ-ASLRFTEAS 73
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
++ + + + +++ Y LS + +A + +A GD AA ++ ++A D
Sbjct: 74 QMLDKGDKAKGTEALQALVASGPSGYKLLSELKLAQVKLADGDAAAAAALYDRIAADGGV 133
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A L++A I ++T + K + L+ S A EIL + ALK G KA
Sbjct: 134 DDIYRDMAVLKSAYIKLETGDIALVEKSVAPLAVESGAWRHSAREILALLALKAGDNAKA 193
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ ++A D +P GI R+ +LA + ++ +
Sbjct: 194 MDLLRKVADDVAAPAGIRGRAAELLAALESAAK 226
>gi|16125898|ref|NP_420462.1| hypothetical protein CC_1652 [Caulobacter crescentus CB15]
gi|221234661|ref|YP_002517097.1| hypothetical protein CCNA_01724 [Caulobacter crescentus NA1000]
gi|13423058|gb|AAK23630.1| hypothetical protein CC_1652 [Caulobacter crescentus CB15]
gi|220963833|gb|ACL95189.1| hypothetical membrane associated protein [Caulobacter crescentus
NA1000]
Length = 250
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 5/213 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + K W+A + ++ + ++ + + + AL
Sbjct: 7 EVEEQLRAERYRT-LAKKSLPWVAAVTAAAVIGVGGYWGWTSY-QTGLTDKASQAYQAAL 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + A + F+ + + K Y L+ M + +I + + T+ A F + A +
Sbjct: 65 QTAQTQGPAKAFAGFKAVADTNAKGYKSLALMQMGAIRLEEKKTQEAVGYFDEAAKVAPS 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P+ + A L++A L+DT+SY++I L L+ +P +A E L + L+ G + A
Sbjct: 125 PM-IGDLARLKSAFALMDTASYKDIETRLTPLAGEKSPYRVYAKEALAFAKLQAGDLAGA 183
Query: 182 KTIFEELAK--DNNSPFGISTRSQMILANIIAS 212
++ F LA D N+ I R+Q + I +
Sbjct: 184 RSEFVILANSLDANTSEAIRQRAQAAMQLIDSG 216
>gi|83945264|ref|ZP_00957613.1| hypothetical protein OA2633_00815 [Oceanicaulis alexandrii
HTCC2633]
gi|83851434|gb|EAP89290.1| hypothetical protein OA2633_00815 [Oceanicaulis alexandrii
HTCC2633]
Length = 253
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + K W+ ++L + + ++ + S +++ + E + A
Sbjct: 7 EVEEELRQERYNALLRKWG-PWVGGAAAAIVLGVGAYQFM-EWSSKQRADAASEQYQAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL+ + L A S F+ ++ + Y L+ M A I +++GD + AA +F +
Sbjct: 65 ELYEAGNLLQADSQFQALVESGPRGYETLALMRRAEIALSQGDAEEAARLFNRAGEISPE 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
PL +R A QAA D SY++++ L+ L+E + P+ A E++ +AL+ + +A
Sbjct: 125 PL-IRDLARYQAALAQFDQLSYDDLANRLEPLTEGAAPVGLLARELMAAAALRDQRWDEA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILA 207
+ ++ L+ + P +S R +
Sbjct: 184 RQRYQLLSVALDLPQAMSQRVMQAQS 209
>gi|170750286|ref|YP_001756546.1| hypothetical protein Mrad2831_3889 [Methylobacterium radiotolerans
JCM 2831]
gi|170656808|gb|ACB25863.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 236
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 4/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + I L +L++ +A W Y + + F A
Sbjct: 10 EVDEDYRRDRILQIWKRYS-GVIIALAVLVVAGVAGWRY-WQAQQRAAAEVASVRFDDAN 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K+ +A +FE + +Q Y L+ A+ K D A F K+A+D
Sbjct: 68 RLAKDGKVAEADKAFETLEAQGPAGYRLLARFRAAAE-TGKRDPAAGAAEFDKLADDTGL 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A L+AA + +D + + LQ L+ P A E+LG++ALK G + A
Sbjct: 127 GDGLRDLARLRAALLRLDGPNPDPALANLQGLAA-GTPFRHTAREMLGLAALKKGDYEDA 185
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
F+++ D ++P + R ++ A +
Sbjct: 186 SRWFDQIVADPDTPRNLRERIEVYAAIVAGG 216
>gi|307946714|ref|ZP_07662049.1| putative TPR repeat-containing protein [Roseibium sp. TrichSKD4]
gi|307770378|gb|EFO29604.1| putative TPR repeat-containing protein [Roseibium sp. TrichSKD4]
Length = 227
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 87/208 (41%), Gaps = 3/208 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D K + + + ++ ++I+ + + E + G+ F A+
Sbjct: 7 EVDEDIRQEKYRRLWDR--FGPWVIVVAVLIVVGTGGYRGWQYWQETQAQEAGDKFMAAV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL S ++ A + + + Y L+ + +A+ + A E F + + D
Sbjct: 65 ELSESANIEGAIEALDALGEAG-GGYPQLAKLRVATEHIKADRKIEALEAFDQASRDPSV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+++ A L+A + VD Y ++ ++ L+ ++P A E+L ++A K G + A
Sbjct: 124 EASLQSIAALRAGYLAVDLEDYAGVADRVEGLTGEADPFRAAARELLALAAWKAGNAEDA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANI 209
+ + D +P +S R ++ I
Sbjct: 184 RKWVSAIENDTETPAEVSRRVGILSEVI 211
>gi|163853440|ref|YP_001641483.1| hypothetical protein Mext_4042 [Methylobacterium extorquens PA1]
gi|163665045|gb|ABY32412.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 236
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 3/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + I L +L++ + + Y + F +A
Sbjct: 10 EVDEDYRRDQIANIWKRYN-ALIITLAVLLVAGVGGYNYWRHA-ERTRAEAASVRFDKAN 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K ++A F I + Y L+ +A+ + A K+A D
Sbjct: 68 RLAKDGKAEEADRDFAAIQADGPGGYALLARFRLAAEATKRDAAAGADAY-DKLAADTGI 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A+R A L+AA + +D + LQ L+ P+N A E+LG++ALK G ++ A
Sbjct: 127 GDALRDLARLRAALLRLDGTDPNAALTSLQGLAAPTNAFRHTAREMLGLTALKRGDIEGA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
F++++ D +P G+ R ++ A +
Sbjct: 187 GRWFDQISTDGETPQGLRQRVEIYQALVAGG 217
>gi|307294127|ref|ZP_07573971.1| Protein of unknown function DUF2133 [Sphingobium chlorophenolicum
L-1]
gi|306880278|gb|EFN11495.1| Protein of unknown function DUF2133 [Sphingobium chlorophenolicum
L-1]
Length = 232
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 86/214 (40%), Gaps = 4/214 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + +WI L++ +L + Y + + + V E + +
Sbjct: 14 EVDEAVRQDQLLTFWQRFG-RWIVALVVGGLLLFGAFLY-WQHYTKTQSQAVSEEMDKVI 71
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
DA+ +K+ + + + A KGD+K A + +A+D
Sbjct: 72 STAVGGGTPDAKE-LDKLTQASQPGFRASALLVKAGTAARKGDSKAAIAAYKAMADDASL 130
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A ++ ++ ++ +++ L+ L+ P A E++ I+ +K K A
Sbjct: 131 DQPYRDLALIRQTTLEYESLQPQQVVDRLKPLAVEGAPWFGSAGELVAIAYMKMRKPDLA 190
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+F +AKD N P I +R++ + A ++ D
Sbjct: 191 GPLFAAMAKDKNVPQSIRSRARQM-AGLLGVDAV 223
>gi|294012483|ref|YP_003545943.1| hypothetical protein SJA_C1-24970 [Sphingobium japonicum UT26S]
gi|292675813|dbj|BAI97331.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 232
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 87/214 (40%), Gaps = 4/214 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + +WI +I+ + + A W Y + + + V E + +
Sbjct: 14 EVDEAVRQDQLLTFWQRFG-RWIVAAVIIGLAAFAGWLY-WQHYTKTQSQAVSEEMDKVI 71
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+A+ +K+ + + + A KGD+K A + +A+D
Sbjct: 72 ATAVGGGTPEAKE-LDKLTQASQPGFRASALLVKAGTAARKGDSKAAIAAYKAMADDASL 130
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A ++ ++ +T +++ L+ L+ P A E++ I+ +K K A
Sbjct: 131 DRPYRDLALIRQTTLEFETLQPQQVVDRLKPLAVEGAPWFGSAGELVAIAYMKMRKPDLA 190
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+F +AKD + P I +R++ + A ++ D
Sbjct: 191 GPLFAAMAKDKDVPQSIRSRARQM-AGLLGVDAV 223
>gi|258542807|ref|YP_003188240.1| hypothetical protein APA01_17320 [Acetobacter pasteurianus IFO
3283-01]
gi|256633885|dbj|BAH99860.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636944|dbj|BAI02913.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639997|dbj|BAI05959.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643053|dbj|BAI09008.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646108|dbj|BAI12056.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256649161|dbj|BAI15102.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256652148|dbj|BAI18082.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655205|dbj|BAI21132.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 231
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 83/222 (37%), Gaps = 15/222 (6%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + + + I LI+ +L+ + S + + + AL
Sbjct: 8 EVDEEMQAERLRMAAKRYAGAGIG--LIVAVLAGIGAWSWHVSSQKSQALEATGTYLTAL 65
Query: 62 ELFN-------------SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ + +S +K+ S D K L+ + + A+GD K A
Sbjct: 66 RQTDHLPSTPSSGTVDLTTTAQAGLASLQKLASSDAKGVAVLARLQEGGVQAARGDVKGA 125
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+ V D A A+R ATL +DT + L L+ P + A E L
Sbjct: 126 LAAWDAVQKDPNADSALRDLATLLWCQKQLDTGEPATLRSRLALLTGKGKPWNGLAMEAL 185
Query: 169 GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
+ ++ G V +A+ F L + P G+ R+Q ++ +
Sbjct: 186 AVLDVREGHVAEARQKFAALQAAQDVPQGVRNRAQDMMQALD 227
>gi|209964705|ref|YP_002297620.1| hypothetical protein RC1_1403 [Rhodospirillum centenum SW]
gi|209958171|gb|ACI98807.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 219
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 8/203 (3%)
Query: 10 YKGKCKMGKCCYKWIAPLLILMIL-------SLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+ + ++ P+LI + W ++++ +G AQAL
Sbjct: 10 EDLRRERAANLWRRFGPVLITAAVLTVAATAGYVAWQRWQSARNQEQTAELGRALAQALP 69
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
S +A ++ + + L+ Y A + +GD + A ++ ++A + P
Sbjct: 70 AGASAPATNAADLLAGAAARTDGAHAALARFYEAGLRARQGDREGAVALYDQLAGTEADP 129
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
R A L A VD+ +++ L L NP + A E+ G+ + + G +A+
Sbjct: 130 -VFRDLAQLLAVLHQVDSGDPKQLLSRLTPLMGSDNPWNWSARELAGLLSARDGDTARAR 188
Query: 183 TIFEELAKDNNSPFGISTRSQMI 205
+F +LA D +P G+ R+ +
Sbjct: 189 ELFSQLADDPQTPAGVRARATEL 211
>gi|240140860|ref|YP_002965340.1| hypothetical protein MexAM1_META1p4432 [Methylobacterium extorquens
AM1]
gi|254563369|ref|YP_003070464.1| hypothetical protein METDI5036 [Methylobacterium extorquens DM4]
gi|240010837|gb|ACS42063.1| hypothetical protein MexAM1_META1p4432 [Methylobacterium extorquens
AM1]
gi|254270647|emb|CAX26651.1| hypothetical protein METDI5036 [Methylobacterium extorquens DM4]
Length = 236
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 3/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + I L +L++ + + Y + F +A
Sbjct: 10 EVDEDYRRDQIANIWKRYN-ALIITLAVLLVAGVGGYNYWRHA-ERTRAEAASVRFDKAN 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K ++A F I + Y L+ +A+ + A K+A D
Sbjct: 68 RLAKDGKAEEADRDFAAIQADGPGGYALLARFRLAAEATKRDAAAGADAY-DKLAADTGI 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A+R A L+AA + +D + LQ L+ P+N A E+LG++ALK G ++ A
Sbjct: 127 GDALRDLARLRAALLRLDGTDPNAALTSLQGLAAPTNAFRHTAREMLGLTALKRGDIEGA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
F++++ D +P G+ R ++ A +
Sbjct: 187 GRWFDQISADGETPQGLRQRVEIYQALVAGG 217
>gi|218532300|ref|YP_002423116.1| hypothetical protein Mchl_4412 [Methylobacterium chloromethanicum
CM4]
gi|218524603|gb|ACK85188.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 236
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 3/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + I L +L++ + + Y + F QA
Sbjct: 10 EVDEDYRRDQIANIWKRYN-ALIITLAVLLVAGVGGYNYWRHA-ERTRAEAASVRFDQAN 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K ++A F I + Y L+ +A+ + A K+A D
Sbjct: 68 RLAKDGKAEEADRDFAAIQADGPGGYALLARFRLAAEATKRDAAAGADAY-DKLAADTGI 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A+R A L+AA + +D + LQ L+ P+N A E+LG++ALK G ++ A
Sbjct: 127 GDALRDLARLRAALLRLDGTDPNAALTSLQGLAAPTNAFRHTAREMLGLTALKRGDIEGA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
F++++ D +P G+ R ++ A +
Sbjct: 187 GRWFDQISADGETPQGLRQRVEIYQALVAGG 217
>gi|85373405|ref|YP_457467.1| hypothetical protein ELI_02890 [Erythrobacter litoralis HTCC2594]
gi|84786488|gb|ABC62670.1| hypothetical protein ELI_02890 [Erythrobacter litoralis HTCC2594]
Length = 270
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+ + +DG E E AL+ + L + E + + DN + M
Sbjct: 64 AAFGGYLWWDGQREAALEQDSEVLVSALDQIEAGNLQTGTETLEPLTTSDNAGAQAAALM 123
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
A I +GD AA +F +VAN+ AP A R AT++ ++ D E+ + L +
Sbjct: 124 LQAGIAAQQGDLARAATLFGQVANNSDAPPAYRDLATVRQVALQFDRLEPAEVIQRLSAI 183
Query: 154 SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
+ P N A E++ ++ L+ G A +F E+AK +++P + +R++ + A ++ D
Sbjct: 184 AVPDNAFFGSAGELVAMAHLEKGDRAAAGKLFGEIAKSDDAPQSLRSRARQM-AGMLGVD 242
>gi|182679274|ref|YP_001833420.1| hypothetical protein Bind_2318 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635157|gb|ACB95931.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 254
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 3/216 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + +G+ ++++ +IL+IL+ A+ + + + +G + A+
Sbjct: 7 EVDEDVRRERILQFLGR--FRFLIGGVILLILAGAVGWRITVSHRLAEAEAMGARYQAAI 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + A ++ + + + + Y L+ + A D AA + +A D
Sbjct: 65 DLAQQGEGAQALAALKTLSEEAPQGYATLARLR-AIDETVASDPVAAAGAYAALAEDSRY 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A L+A + VD + L++ A E+L ++ALK A
Sbjct: 124 PAIFRDLAHLRALYLQVDQLDPKVFEDKAAALAKSDFAFRNSARELLALAALKRKDFDAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+E+ D +P + R++ L + A K
Sbjct: 184 GHWLDEIVVDPAAPASMRQRAEAFLGLVQAGKPAYK 219
>gi|217976949|ref|YP_002361096.1| hypothetical protein Msil_0763 [Methylocella silvestris BL2]
gi|217502325|gb|ACK49734.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 328
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 84/211 (39%), Gaps = 3/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + K W +L++ + A W ++ H + G + AL
Sbjct: 7 EVDEDYRRERLAKIWTKY-QGWFIGAAVLLVAATAGW-RIYQHFHLQAAEAAGARYEAAL 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K +A + F++I + K Y L+++ +V + D A + + D
Sbjct: 65 RLSQDGKSAEAEAEFKEIAASGPKGYATLAHLRAVDEIVGR-DPAAAIAAYDALGADPTF 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ + AA +AA + VD + + L++PS H E+L ++A K + A
Sbjct: 124 DQSFKEAAQTRAAVLRVDRDDPKAFEEKYGALAQPSFTYHDTIRELLALAAFKREDFEAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ + D +P + R++ L + A
Sbjct: 184 GRWLDMIVGDPRAPGPLRQRAEAFLGLVQAG 214
>gi|254440175|ref|ZP_05053669.1| hypothetical protein OA307_5045 [Octadecabacter antarcticus 307]
gi|198255621|gb|EDY79935.1| hypothetical protein OA307_5045 [Octadecabacter antarcticus 307]
Length = 229
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 7/205 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + K M K Y WIA L++LMI+ + E VG+ AL
Sbjct: 10 EVTEEVRKDKLLGYMRK--YGWIAVLVVLMIVGGTAFSEFRKAQSEGAAQAVGDEILVAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E+ + A + + I ++ + A+ L D AA VA D
Sbjct: 68 EIDDDQGRAAALQAIDVI-----GPAAAVTGLLTAANLTEIDDISGAAGALDAVALDADI 122
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A L++ I DT S E+ +L L+ P A E L + +++ G + A
Sbjct: 123 PQVYRDLAALKSVMIKGDTLSIEDRRTMLADLAVAGAPFRVVAQEQLALISVEAGDIDTA 182
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
T F LA+D + G+ R+ ++
Sbjct: 183 VTQFAALAQDAEATRGLRERAFSMI 207
>gi|188583712|ref|YP_001927157.1| hypothetical protein Mpop_4524 [Methylobacterium populi BJ001]
gi|179347210|gb|ACB82622.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 237
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 3/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + I IL++ + + Y + E F +A
Sbjct: 10 EVDEDYRRDQIAKIWKRYNALIITG-AILLVAGVGGYNYWRHA-ERTRAEAASEQFDRAN 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K ++A F I ++ Y L+ +A+ + A+ + +AND
Sbjct: 68 RLAKDGKAEEADRDFAAIRAEAPGGYALLARFRLAAEAAKRD-AAAGAQAYDGLANDTGI 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++R A L+AA + +D + LQ L+ P+N A E+LG++ALK G ++ A
Sbjct: 127 GDSLRDLARLRAALLRLDGTDPNPALTSLQGLAAPTNAFRHTAREMLGLTALKRGDIEGA 186
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
F++++ D +P G+ R ++ A +
Sbjct: 187 GRWFDQISADAETPQGLRQRVEVYEALVAGG 217
>gi|167646458|ref|YP_001684121.1| TPR repeat-containing protein [Caulobacter sp. K31]
gi|167348888|gb|ABZ71623.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter sp. K31]
Length = 254
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 81/212 (38%), Gaps = 4/212 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E S + K K W+ L + IL A W + N E + AL
Sbjct: 7 EVEEQLRSDRYKSLALKSL-PWVGALAAVAILGTAGWAGWSSYQQNQT-NKASEAYQAAL 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ +FE I Y L+ + + +I + T +A F + A
Sbjct: 65 VSAGKIGPAGSFPAFEAISKDGPPAYKTLALLQMGAIRLEADKTADAVAYFDQAAKLAPN 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P + A L +A L+DT+ Y+++ L L +P A E L + L+ G + A
Sbjct: 125 P-VLGDLARLNSALALLDTAPYKDVEARLTPLMGEKSPYRVQAKEALAFAKLRAGDLAGA 183
Query: 182 KTIFEELAKD-NNSPFGISTRSQMILANIIAS 212
+ F L+ +NS + R+Q +A I +
Sbjct: 184 RGDFSVLSTALDNSSEEVRQRAQGAIAMIDSG 215
>gi|300022383|ref|YP_003754994.1| hypothetical protein Hden_0856 [Hyphomicrobium denitrificans ATCC
51888]
gi|299524204|gb|ADJ22673.1| Protein of unknown function DUF2133 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 264
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + Y + ++ + F+ + G +++ A
Sbjct: 11 EVEQEIRREQMAKLWQR--YSGLIVAAAAFLVLAVAGYKFFESRRIVAEQAAGADYSAAE 68
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L ++ K ++A ++F+KI + Y L+ + +A+ L+ G T +A + +A + A
Sbjct: 69 TLSDNKKKEEAEAAFKKIAEEGPAGYGSLARLQLAAALLKDGKTADAIATYEALAKESGA 128
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ A LQAAS+ + + Y EI L ++ P + A E+LG++A K GK +A
Sbjct: 129 DNLLKSFAQLQAASLRMPDADYAEIQNRLTPIAGDDAPFSKSARELLGVAAYKAGKFDEA 188
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASD 213
+ E L D N + R +++++ I A++
Sbjct: 189 RKYLEPLLIDPNVSEALQERVKILMSGIAAAE 220
>gi|315499683|ref|YP_004088486.1| hypothetical protein Astex_2696 [Asticcacaulis excentricus CB 48]
gi|315417695|gb|ADU14335.1| hypothetical protein Astex_2696 [Asticcacaulis excentricus CB 48]
Length = 243
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E+ + K L + +I +L W Y + + E + A
Sbjct: 7 EAEEGLRQDRWAAIAKKSAPFVGGALAVALIGALGFWGYT--SWDASRVSKASEAYVAAQ 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E N A++ F+K++ Y L+ +A + V T A ++ + +
Sbjct: 65 EALTKNDKAAAKADFQKVVDAGAPGYKALALSQLAGLAVEDNKTDEAVKLLEEASKTSSD 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
PL + ATL+A +++D +S+E++ K L L++ P A E L ++ ++ G +Q A
Sbjct: 125 PL-IADLATLKATFLIMDKASFEDVEKRLTPLTKEGRPYAPLAKEALAMAKIQKGDIQGA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASD 213
+ + LA ++ + R+QM +A I +
Sbjct: 184 RGDLQALAFSLDASDPLKQRAQMAVALIDSGG 215
>gi|295689709|ref|YP_003593402.1| hypothetical protein Cseg_2324 [Caulobacter segnis ATCC 21756]
gi|295431612|gb|ADG10784.1| Protein of unknown function DUF2133 [Caulobacter segnis ATCC 21756]
Length = 249
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 2/175 (1%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
++ + + + E + ALE + A F+ + + Y L+ + + I
Sbjct: 42 YWGWKSYQTSQADRASEAYQAALETAQTAGPAKAFGQFKAVADGGARGYKALALLQMGDI 101
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+ + TK A F + A + A L++A L+DT+SY++I L L+ +
Sbjct: 102 RIEENKTKEAVAYFDEAAKAAP-DAILGDLARLKSAFALMDTASYKDIESRLTPLAGEKS 160
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKD-NNSPFGISTRSQMILANIIAS 212
P +A E L + L+ G V A+ F LA +N+ + R+Q + I +
Sbjct: 161 PYRVYAKEALAFAKLQAGDVAGARGDFVVLANSLDNTSEEVRQRAQAAMQLIDSG 215
>gi|302383645|ref|YP_003819468.1| hypothetical protein Bresu_2537 [Brevundimonas subvibrioides ATCC
15264]
gi|302194273|gb|ADL01845.1| Protein of unknown function DUF2133 [Brevundimonas subvibrioides
ATCC 15264]
Length = 267
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 15 KMGKCCYKWIAPL--LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDA 72
++ + W+ + ++ + L A+ ++ + + N + + +E S A
Sbjct: 16 RLKRLARTWLPVVGGILAVALVAALAWWGWQSFQTSQANKASVAYQRGIESLQSGDTTAA 75
Query: 73 RSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132
S+F + N Y L+ A + V +A ++F A D P+ + A +
Sbjct: 76 ESAFAEAEKAGNGAYKALALQQRAGLAVQANRIPDAIKLFDDAAKADSDPM-LADPARYK 134
Query: 133 AASILVDT-SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
AA +L+D + ++ L L+E PM FA E LG++ L+F K +A+ F L
Sbjct: 135 AALLLMDNGGTLADLEARLLPLTEDDRPMRPFAQEALGLTRLQFNKPAEAREQFVLLTLG 194
Query: 192 NNSPFGISTRSQMILANIIAS 212
+ P + R+Q ++ I A
Sbjct: 195 QDVPESVRQRAQAAISMIDAG 215
>gi|254451631|ref|ZP_05065068.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198266037|gb|EDY90307.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 229
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 7/205 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + K M K Y WIA L +L+I+ + VG+ AL
Sbjct: 10 EVTEEVRKDKLFGYMRK--YGWIAVLAVLLIVGGTAYSEFRKAQTTGAAQAVGDEILAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E+ + ++ + I ++ + A+ L D A VA D A
Sbjct: 68 EIDDDEGRA---AALQAIDVSGPAA--AITGLLTAANLTETDDIAGAVGALEAVALDADA 122
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A L++ + DT S E+ +L L+ P A E L + +++ G ++ A
Sbjct: 123 PQVYRDLAVLKSVMVQGDTLSIEDRRALLAGLAMAGGPFRVLAQEQLALISVEAGDIETA 182
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
T F LA+D + G+ R+ ++
Sbjct: 183 VTQFVALAQDAEATRGLRERAFSMI 207
>gi|329850800|ref|ZP_08265645.1| TPR repeat-containing protein [Asticcacaulis biprosthecum C19]
gi|328841115|gb|EGF90686.1| TPR repeat-containing protein [Asticcacaulis biprosthecum C19]
Length = 246
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
F+ F +K+ E F +E A++SFE+ N Y +S M +A +
Sbjct: 42 FWGFTTWQDKEVAKASEVFQAGIEAAAKGDSTAAKASFEQTAKGSNSTYKAMSLMQLAGL 101
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
G T A ++F A P A L+AA +++D + + K L L++
Sbjct: 102 AHRDGKTDEAIKLFDDAAKASSDPRV-ADLAALKAAYLVMDKGVFADSQKRLTPLTDAKR 160
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
P A E L ++ L+ G A+ L+ + ++P G+ R+Q ++A I
Sbjct: 161 PYTFLAKEALAMAKLQNGDAAGARADLNALSFELDAPEGVKQRAQRVVAAID 212
>gi|323138583|ref|ZP_08073651.1| Protein of unknown function DUF2133 [Methylocystis sp. ATCC 49242]
gi|322396217|gb|EFX98750.1| Protein of unknown function DUF2133 [Methylocystis sp. ATCC 49242]
Length = 254
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 5/210 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D K + I + L++ + W Y D K F A+
Sbjct: 7 EVDEDVRRDKAADFWRRY-QTPIFVVAFLIVAATGAWSYYQDKRQ-KTAEAANARFEAAV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L N K +A ++F+ I K Y L+ + A A+ D A + D
Sbjct: 65 ALANEGKNAEAAAAFDAIAKDGPKGYAALARIRAAE---ARPDKTQALAELNAIGEDPTV 121
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ A L+AA ++++ E++ + L L + A E G+ AL +A
Sbjct: 122 DKLMQEVALLRAALLVMEGGDREKLERALGPLMTSNGAFRFSAQEWNGLDALANDDFDEA 181
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIA 211
+ +FE++ D ++P + R+ + A
Sbjct: 182 ERVFEQVLADRDAPQSMRQRASAYKGLLHA 211
>gi|148556029|ref|YP_001263611.1| hypothetical protein Swit_3124 [Sphingomonas wittichii RW1]
gi|148501219|gb|ABQ69473.1| Uncharacterized protein [Sphingomonas wittichii RW1]
Length = 235
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 84/182 (46%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y IA + +L++L F + + EKK GE + + +++ +A + ++
Sbjct: 31 YGRIALVALLLLLVAFAGFLYWRQASEKKAEAQGEQMSALIADVQASRKAEAAKKIDTLV 90
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
++ Y + + A++ +GDTK+A I+ +A D+ A R + ++ + D
Sbjct: 91 AEGGDGYRIAALLTKATLAADRGDTKSAIGIYAGIAADEKAAQPYRDVSLIRQTLLEYDG 150
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ +++ L+ L+ N A E+ ++ ++ + +A + +A+D P + T
Sbjct: 151 LTPQQVIDRLKPLAVEGNAFFGTAGEMTAVAMIQANRGAEAGRLLAAVARDKTVPDTLRT 210
Query: 201 RS 202
R+
Sbjct: 211 RA 212
>gi|197104997|ref|YP_002130374.1| hypothetical protein PHZ_c1534 [Phenylobacterium zucineum HLK1]
gi|196478417|gb|ACG77945.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 256
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E S + + + + WI + L+++++ ++ +D ++ E + A
Sbjct: 7 EVEEQLRSDRYRS-LARRTLPWILAAVALVLVAVLAYW-GWDTWRSREVAKASEQYQAAG 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E + A+ + ++ Y L+ M + ++ + + T A ++F + A+
Sbjct: 65 EALAAGDRAKAQQLWTEVSQSSAGGYKSLALMQLGALNLDENKTDEAVKLFDQAASAAP- 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ AA L++A ++DT+ Y+++ L L + P A E L + L G A
Sbjct: 124 DELIGDAARLKSAFAVLDTAPYKDVEARLTPLIKDGRPYRVQAREALAFAKLMAGDTAGA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ F L + ++ G+ R+Q ++ I +
Sbjct: 184 RGDFVVLQQMLDASDGVRARAQAAISLIDSG 214
>gi|162149031|ref|YP_001603492.1| hypothetical protein GDI_3261 [Gluconacetobacter diazotrophicus PAl
5]
gi|209545220|ref|YP_002277449.1| hypothetical protein Gdia_3104 [Gluconacetobacter diazotrophicus
PAl 5]
gi|161787608|emb|CAP57204.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209532897|gb|ACI52834.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 229
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 87/223 (39%), Gaps = 15/223 (6%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E ++D + + + + +A + + ++ + G + + AL
Sbjct: 8 EVDDDLRAERLRALARRYVAAAVAVVAVAGAGVGGWQYHAWRGRQADRAWAA--TYFTAL 65
Query: 62 ELFNSNKL------------DDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+S+++ DA F + L+ + A++L + GDT+ A
Sbjct: 66 HAADSSQIVPGETARLTPQQQDALKRFATL-DTAPPGLRTLARLERAALLASSGDTRGAL 124
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
++ +VA+D A +R A+L +D + L L P A E
Sbjct: 125 SLWTQVADDGAADPQLRSLASLLWVQRQIDDGDPATLRSRLTTLDGVGKPWRALAIECEA 184
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ L+ G+ A+ F +L+ + + P G+ +R+ +L + AS
Sbjct: 185 MLDLRQGRTADARRRFAQLSAEADVPDGLRSRAGGLLQTLNAS 227
>gi|296532291|ref|ZP_06895030.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267367|gb|EFH13253.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 216
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 81/209 (38%), Gaps = 2/209 (0%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + + A L +L++ L W + Q
Sbjct: 7 EVQEELRAERARRMALRYGGLV-AGLALLVLAGLGGWQGWRWYQQREATQSAAIFLEQHR 65
Query: 62 ELFNSNKLDDARS-SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
A F + S + Y LS + A++ GD A ++ +++ D+
Sbjct: 66 AAEAQGADLRAIGDRFAGLASSGPEGYRILSALRAAALKAETGDRDGALALWNQLSADNA 125
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
AP R A+L A +D+ ++S L L+ + A E+ G+ AL+ G
Sbjct: 126 APRIYRDLASLMWALHGIDSQDPAQLSARLGPLAAEGSAWRASARELQGLLALRQGDKAT 185
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANI 209
AK F+ LA+D +P G+ R+ + A +
Sbjct: 186 AKREFDALAQDVTAPQGLRERAGRLAAGL 214
Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN 92
+LA+W L + + + AL +S + + ++ + + +
Sbjct: 112 GALALWNQLSADNAAPRIYRDLASLMWALHGIDSQDPAQLSARLGPLAAEGS-AWRASAR 170
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+ + +GD A F +A D AP +R A AA + V
Sbjct: 171 ELQGLLALRQGDKATAKREFDALAQDVTAPQGLRERAGRLAAGLGV 216
>gi|126732582|ref|ZP_01748379.1| hypothetical protein SSE37_25043 [Sagittula stellata E-37]
gi|126706866|gb|EBA05935.1| hypothetical protein SSE37_25043 [Sagittula stellata E-37]
Length = 218
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 6/211 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + M + Y WIA L++L+++ W S E G++ A+
Sbjct: 10 EVTEEVKRDRLFAMMKR--YGWIAVLIVLLLVGGTAWREYQISSRETAAQAFGDSVLDAM 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
++ N ++ E + S + M A + G+T A VA D
Sbjct: 68 DV---NDAAAKAAALEDLSSDTPSA-RAVLEMLTADAEQSSGETPAAVARLQGVAADTAV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A+ +A + D EE L+ L+ P P+ A E L + ++ G+ + A
Sbjct: 124 PNIYRQIASYKAMMLGFDVLPVEERRAGLEALAVPGQPLRLLAEEQLALVEIEVGEREAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
T + + D+ G+ R+ ++ +
Sbjct: 184 LTRLQAMLDDSEITAGLRRRASQLIVALGGE 214
>gi|288958552|ref|YP_003448893.1| hypothetical protein AZL_017110 [Azospirillum sp. B510]
gi|288910860|dbj|BAI72349.1| hypothetical protein AZL_017110 [Azospirillum sp. B510]
Length = 214
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 82/207 (39%), Gaps = 3/207 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + + IA +++++ + + +K+ A+
Sbjct: 7 EVDEDLRRDRAEHLFKRYGGAMIAAA--VLVVAGTAGYSFWRNWQAQKRQEQTVALVTAI 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + + L+ A++L+ +G +AA ++ +A
Sbjct: 65 SQSGQG-PEKGIEALAAFAGSADPSLAALAQFNAAALLIRQGKPADAATVYDGIAGHGSV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P+ R ATL A +++ L L+ ++P A E+ + A + G +KA
Sbjct: 124 PVEYRDLATLLAVMQRAGDGDAAQLTAKLLPLTAETSPWRFTARELTAMLAARSGDTEKA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILAN 208
+T++++LA D +P G+ R+ + +
Sbjct: 184 RTLYKQLADDQLAPSGVRGRAADLASL 210
>gi|296116362|ref|ZP_06834977.1| hypothetical protein GXY_11204 [Gluconacetobacter hansenii ATCC
23769]
gi|295977062|gb|EFG83825.1| hypothetical protein GXY_11204 [Gluconacetobacter hansenii ATCC
23769]
Length = 220
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 73/215 (33%), Gaps = 14/215 (6%)
Query: 7 ANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNS 66
+ + + + +A ++++ I + + + + AL+ +
Sbjct: 1 MRAERLRALARRYMM--LAGVIVVAICIGGGAWQYNAWRVHQADQASADAYFAALKNATT 58
Query: 67 NKLDD------------ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
D A + LS M A++LV GDT A ++ +
Sbjct: 59 AHSPDGQPAPLNAQQKTALEQLATLEKTARPPLRALSRMERAALLVNSGDTARALALWAQ 118
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
V D A + A L +DT+ + L L P A E + L+
Sbjct: 119 VNADQGADPTISSLAGLLWVQHQIDTADPAMLRSRLALLDGAQQPWRGLALECEALLDLR 178
Query: 175 FGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
G +A+ E L+ D N G+ TR+ +L +
Sbjct: 179 QGHDDEARRRLERLSMDMNVSDGVRTRADGLLQTL 213
>gi|296446240|ref|ZP_06888187.1| Protein of unknown function DUF2133 [Methylosinus trichosporium
OB3b]
gi|296256277|gb|EFH03357.1| Protein of unknown function DUF2133 [Methylosinus trichosporium
OB3b]
Length = 241
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 86/211 (40%), Gaps = 3/211 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + D + + + L++ A W + ++ + + + A
Sbjct: 7 EVDEDVRRDQAANLWKRY-RTPVIVAAALIVAGTAAWSF-YENKRLEAAFAANQRYGAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL + K +A ++FE + + K Y L+ + A L K D + A F VA D
Sbjct: 65 ELAAAGKSAEAAAAFEAVAKETPKGYATLARLRAAEELA-KSDKEKALAAFDAVAQDKSV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A L+A + ++ ++ L +L P A E++G+ AL G +A
Sbjct: 124 DRLTQEVAKLRAGLVALEQGDRSKMVDRLGELVTSDGPFRYTAQELIGLDALNDGDFDEA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ +F+ L + ++P + R+ A + A+
Sbjct: 184 QRVFKLLLDNLDAPHAMRQRASAYQALLNAA 214
>gi|254489034|ref|ZP_05102239.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214045903|gb|EEB86541.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 243
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 6/201 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ + + + Y WIA L I++I+ A W K +G+ AL
Sbjct: 16 EVNDEVRRDRFYFMLKR--YGWIAVLAIVLIVGAAAWNEYQKAQARSKAEALGDAAFAAL 73
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L ++ A S+ + + + L A+ V GD A E +A +
Sbjct: 74 TLQDTEGRAAALSA---VETDSPRAAAVLG-FLTAAEQVEAGDKSAAIETLNAIAVNGEV 129
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A L++ ++ + + L+ L++P N + A E L + ++ Q A
Sbjct: 130 PAIYREIAQLKSVTLQGTETPVSDRRLALEALAQPGNTLRLLAEEQLALIEIEENNPQGA 189
Query: 182 KTIFEELAKDNNSPFGISTRS 202
++ + D + R+
Sbjct: 190 IDRYQAILLDAEVTADLQQRA 210
>gi|84503433|ref|ZP_01001493.1| hypothetical protein OB2597_03749 [Oceanicola batsensis HTCC2597]
gi|84388220|gb|EAQ01172.1| hypothetical protein OB2597_03749 [Oceanicola batsensis HTCC2597]
Length = 205
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 4/196 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WIA L+IL+I+ A W+ + G+ ALE + A S+ E
Sbjct: 8 YGWIAVLVILLIVGGAAWYEYDRSRETAQARAFGDAILAALEQGEPLERATALSAIEA-- 65
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ +M A GD + A + VA + L R A +A ++ D
Sbjct: 66 --GTPDARAVRDMLEAGERSTAGDREGALTLLTGVAENPELQLIYRSLAKFRALALSTDD 123
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
E + L+ +P+ A E + ++ ++ G +A + + +
Sbjct: 124 MGPAERRAEYEDLAGAGSPLRLLAKEQIAVTHIEEGNRDEALRQLNAMLDEAGMTQDLLR 183
Query: 201 RSQMILANIIASDQRN 216
R ++ ++ + N
Sbjct: 184 RVSQLIVSLGGTPGEN 199
>gi|254460969|ref|ZP_05074385.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206677558|gb|EDZ42045.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 224
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 6/212 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + M + Y WIA L IL ++ A W + G AL
Sbjct: 10 EVSEEMRRDRLYGYMRR--YGWIAVLAILSLVGGAAWNEYSKSQARAEAQSAGNAILAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQD-NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
++ + S E + S+D + + ++ A+ A D A +A D
Sbjct: 68 ---EADDPQERVKSLEALQSEDITEGAKAVVSLMQAAEQSAGDDPAGAQTALEAIAVDGS 124
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
P R A+ ++A+ + S E+ L LS P + A E L + ++ G
Sbjct: 125 LPEIYRQIASFKSATKSGGSLSMEDRRLRLDALSAPGTSLRLLATEQLAMLDIEAGDTAA 184
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A + + D G+ R+ ++ + A
Sbjct: 185 ALEKLQGIVVDAEVTAGLRQRATQLIVALGAE 216
>gi|83943021|ref|ZP_00955481.1| hypothetical protein EE36_12608 [Sulfitobacter sp. EE-36]
gi|83846029|gb|EAP83906.1| hypothetical protein EE36_12608 [Sulfitobacter sp. EE-36]
Length = 237
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 77/201 (38%), Gaps = 6/201 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + + + Y WIA L +++++ A W + +G+ AL
Sbjct: 10 EVNEEVRRDRFYFMLKR--YGWIAVLAVILLVGGAAWNEYQKAQARAEAETLGDAMFAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
++ ++FEKI + + + L + A+ G+T A + D
Sbjct: 68 SAEDT---AARAAAFEKIEATNPRAGAMLG-LLTAAEQAQAGETDAAVATLNGIGLDADV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A +A ++ E L+ L++P + + A E L + ++ + A
Sbjct: 124 PAIYREIAQFKAITLQGSDMPANERRLALENLAQPGSSLRLLAQEQLAMIDIEEDAPEAA 183
Query: 182 KTIFEELAKDNNSPFGISTRS 202
++ + D + + R+
Sbjct: 184 IERYQGILNDADVTSDLQQRA 204
>gi|126736008|ref|ZP_01751752.1| hypothetical protein RCCS2_02198 [Roseobacter sp. CCS2]
gi|126714565|gb|EBA11432.1| hypothetical protein RCCS2_02198 [Roseobacter sp. CCS2]
Length = 218
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 71/205 (34%), Gaps = 9/205 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + K + + Y WI +L+++ A W + G+ AL
Sbjct: 10 EVTEEVRREKLYGYLRR--YGWIGVAAVLLLVGGAAWNEYSNAQARSAAEATGDALMSAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E + A + E + ++ + A+ GD AA+ V +
Sbjct: 68 EENDPTVRAAAMAQVE-----GDGAAAAVTLLLRAATEQEAGDNAAAAQTLNDVTTNPDV 122
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A L+AA + D L+ LS+P P A E + L G A
Sbjct: 123 PEMYRDVAALKAAMLPSD--DVAARRANLEALSQPGQPFRLLALEQIAYMTLGEGDADGA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
+ E+ +D G+ R Q ++
Sbjct: 181 IAVMREIVEDAGVTRGLRERVQTLM 205
>gi|154246484|ref|YP_001417442.1| hypothetical protein Xaut_2543 [Xanthobacter autotrophicus Py2]
gi|154160569|gb|ABS67785.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
Length = 237
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 3/204 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E D + + + IA ++++++ A + + ++ F A+
Sbjct: 7 EIEEDLRRERLRKLWDRFGGLIIAAIVLVVV--GAAGWSGYKYWRHQQAVTASAAFQSAI 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
LF++ K +A ++F + Y L+ A+ A+ F +A D
Sbjct: 65 SLFDAGKFPEAEAAFAAVAKDGPAGYRTLALFRGAAAAAARD-KAAGVAAFDAIAADAGL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P VR A L+AA ILVDT+ E+ + + ++ + P+ A E L ++ LK G A
Sbjct: 124 PSLVRELAQLRAALILVDTAGLAEVKQRVAAIAAGTGPLRNAAREALALAELKAGDAAAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMI 205
E+ D+ +P G+ +R+++I
Sbjct: 184 NKTATEITSDSETPPGVRSRAELI 207
>gi|254474487|ref|ZP_05087873.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214028730|gb|EEB69565.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 223
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 78/211 (36%), Gaps = 6/211 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + Y WI + + +I+ A + + +G+ AL
Sbjct: 10 EVTEEVRRDRLFLMLKR--YGWIGGVAVALIVGGAAYREYDRAQTQAAAEQLGDQMIAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ +S +A S + + + + A L G+ A + +
Sbjct: 68 DSDDSAARAEALSQITA----GSAGGDTVLKLLQAGALADAGERDAAIAALNAIGGNGDV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
PL R+ AT +A + D+ + + L++P P+ A E L + ++ GK ++A
Sbjct: 124 PLIYRHIATFKALGLQQDSLPAADRRIQFEALAQPGAPLDLLAREQLALIDIEEGKTEEA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ ++ + R+ ++ + S
Sbjct: 184 ISKLRDIINAATVTSDLQDRASQVIVALGGS 214
>gi|294086066|ref|YP_003552826.1| hypothetical protein SAR116_2499 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665641|gb|ADE40742.1| hypothetical membrane associated protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 208
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 77/210 (36%), Gaps = 8/210 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + + K++ ++++L++ + K+ + + +L
Sbjct: 7 EIDEELKKDRAELLWARYG-KYVIGACLVVVLAVGG-HQGYGIYSTKQIEKAADLYHTSL 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
K DD SS + + Y L+ IA+ GD A + +A D
Sbjct: 65 ------KADDVISSLNNNVDELTDGYQMLARFQIAAAEARAGDHAAAQASYSALAEDKNI 118
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A L + SS + + L L + A E L+ GKV A
Sbjct: 119 DPLYQQFAQLLSVMNAPADSSVQSLQDRLAPLISAAGTWQGLALEQSAGLDLQTGKVDAA 178
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIA 211
KT E++ K P + R+Q +L + A
Sbjct: 179 KTKLEQIVKLTEIPQSLRQRAQRMLDILNA 208
>gi|83954196|ref|ZP_00962916.1| hypothetical protein NAS141_17859 [Sulfitobacter sp. NAS-14.1]
gi|83841233|gb|EAP80403.1| hypothetical protein NAS141_17859 [Sulfitobacter sp. NAS-14.1]
Length = 237
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 76/201 (37%), Gaps = 6/201 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + + + Y WIA L +++++ A W + +G+ AL
Sbjct: 10 EVNEEVRRDRFYFMLKR--YGWIAVLAVILLVGGAAWNEYQKAQARAEAETLGDAMFAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
++ A FEKI + + + L + A+ G+T A V D
Sbjct: 68 SAEDTAARASA---FEKIEATNPRAGAMLG-LLTAAEQAQAGETDAAVATLNGVGLDADV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A +A ++ E L+ L++P + + A E L + ++ + A
Sbjct: 124 PAIYREIAQFKAITLQGSDMPANERRLALENLAQPGSSLRLLAQEQLAMIDIEEDAPEAA 183
Query: 182 KTIFEELAKDNNSPFGISTRS 202
++ + D + + R+
Sbjct: 184 IERYQGILNDADVTSDLQQRA 204
>gi|330994710|ref|ZP_08318633.1| hypothetical protein SXCC_04598 [Gluconacetobacter sp. SXCC-1]
gi|329758351|gb|EGG74872.1| hypothetical protein SXCC_04598 [Gluconacetobacter sp. SXCC-1]
Length = 232
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 72/222 (32%), Gaps = 13/222 (5%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + + + + + I W Y +H + F
Sbjct: 8 EVDEEIRAERIRALARRYLVVAGVVVAGICI-GAGGWQYSLSRAHRADAAVSAAYFTAMA 66
Query: 62 ELFNSN------------KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ + + + + + ++ L+ M A++L GD A
Sbjct: 67 DAARAPDAPATGVTPLTTRQKTGLAELQALDAKARPPLRILARMERAALLAGSGDLPGAL 126
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
++ VA + + A+L +D+ + L L P A E
Sbjct: 127 ALWDGVAQEKAVDPTIAALASLLWVQHQIDSGDPATLRSRLAVLDGTGQPWRGQAIEAEA 186
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
+ L+ GK A+ F LA D G+ +R++ +L +
Sbjct: 187 LLDLRAGKDADARARFTRLAMDMGVGDGVRSRAEAMLQTMGG 228
>gi|56697189|ref|YP_167553.1| hypothetical protein SPO2330 [Ruegeria pomeroyi DSS-3]
gi|56678926|gb|AAV95592.1| hypothetical protein SPO2330 [Ruegeria pomeroyi DSS-3]
Length = 258
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 75/210 (35%), Gaps = 6/210 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + + WI L ++ I+ A W K +G+ AL
Sbjct: 45 EVTEEVRRDRMFLLLKR--WGWIGGLAVVAIVGGAAWNEYSKAQATAKAQGLGDAVIAAL 102
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
++ +A + D+ + + A+ KGDT A +A
Sbjct: 103 SANDAAARAEALGAITP----DSTGGAAVLALLTAAADSGKGDTAAAVARLETLAAQGDL 158
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A +A + DT + + + L++P P+ A E L + + G + A
Sbjct: 159 PPVYRQIAAFKALLLQADTLPVSDRRQQFEALAQPGAPLRLLALEQLALIDIAEGDTEAA 218
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIA 211
+ + +D + R+ ++ + A
Sbjct: 219 LARLQSIREDAEVSTDLQQRATQLMVALGA 248
>gi|86138477|ref|ZP_01057051.1| hypothetical protein MED193_05216 [Roseobacter sp. MED193]
gi|85825002|gb|EAQ45203.1| hypothetical protein MED193_05216 [Roseobacter sp. MED193]
Length = 223
Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 81/215 (37%), Gaps = 7/215 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + Y WI L +++I+ A + +G+ AL
Sbjct: 10 EVTEEVRRDRLFVMLKR--YGWIGGLAVVLIVGGAAFSEYNKAKDLAAAQTLGDEMIAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+A +I ++ L+ M A L G + A VA D
Sbjct: 68 SSDEGQPRAEA---LNEISAKTPGGAAVLA-MLQAGALADAGQPEEAVARLQTVALDGDL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
PL R+ A+ +A + D+ S E L++P P+ A E + + ++ G + A
Sbjct: 124 PLIYRHIASFKALGLQQDSLSTAERRLQFDALAQPGAPLALLAAEQIALLDIEEGNAEAA 183
Query: 182 KTIFEELAKDNNSPFGISTRS-QMILANIIASDQR 215
+ + +D + R+ Q+I+A A D+
Sbjct: 184 IDRLKAIVEDAGVTADLKERATQVIVALGGALDEA 218
>gi|260433295|ref|ZP_05787266.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417123|gb|EEX10382.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 223
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 71/192 (36%), Gaps = 4/192 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+ W+ L+++I+ A + + +G+ A+ +N + ++ + +
Sbjct: 27 WGWVGVALVVLIVGGAAFNEYRKARSASQAQELGDAILAAMA---NNDPSERAAALQAVS 83
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ + + ++ L G A E +A P R A+ ++ + DT
Sbjct: 84 AHTAGG-DAVVGFLLSGALTEAGSIPEAVERLNAIAAQGDLPEIYRAIASFKSLLLQADT 142
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ + + L+ P+ A E L + + G Q A + L +D + I
Sbjct: 143 LPAADRRQQFEALAAAGAPLRLLAEEQLALIDVAEGDTQAALDRLQALRQDAEAGIEIRQ 202
Query: 201 RSQMILANIIAS 212
R+ ++ + +
Sbjct: 203 RAGQLIVALGGT 214
>gi|103487686|ref|YP_617247.1| hypothetical protein Sala_2205 [Sphingopyxis alaskensis RB2256]
gi|98977763|gb|ABF53914.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
Length = 253
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 91/217 (41%), Gaps = 6/217 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + M + +WI ++ ++L+ + Y + E AL
Sbjct: 14 EVDEAVRKDRLDTIMQRYG-RWIIGGVLAILLAFGGYLYWNHRQDVARGEQA-EELIAAL 71
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ +N+ A S EKI + Y + M +A++ GD K AA + KVA D
Sbjct: 72 DKLEANQPRAATSELEKIAAAGTPAYRAAATMQLANVKAGAGDLKAAAALMAKVAADTQV 131
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLS---EPSNPMHQFANEILGISALKFGKV 178
++R A ++ + DT E + ++ + +P++ A E+ + + G+
Sbjct: 132 DRSLRDLALIRQTAFEYDTLKPEAVIARMKPIVDARDPASSWFASAAELSASAHYRLGQF 191
Query: 179 QKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+A ++ +AK + P + +RS + +A ++ D
Sbjct: 192 DRAGALYGRIAKLPDLPKSLQSRS-VQMAGMLGVDAV 227
>gi|259419239|ref|ZP_05743156.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259345461|gb|EEW57315.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 229
Score = 95.0 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 4/195 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WI + +L+I+ A W VG+ + AL ++ A +
Sbjct: 34 YGWIGAVAVLLIVGGATWREYSRAKAVSAAQDVGDQISAALTANDAADRAVALADI---- 89
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
S + + A+ L G+ + AA + VA P R A ++ + +T
Sbjct: 90 SAGEVGAKAVVDFAQAAALADAGEPEKAASLLDAVAQQSELPQVYRDIAAFKSVILQAET 149
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
E+ L+ L+ + A+E L + ++ G A +E+A +
Sbjct: 150 MPVEDRRLRLETLAAAGGSLQFLASEQLALLDIEAGDTDAALARLKEIAASAGVSRDLQE 209
Query: 201 RSQMILANIIASDQR 215
R ++ + S +
Sbjct: 210 RVSQVIVALGGSPEA 224
>gi|110679078|ref|YP_682085.1| hypothetical protein RD1_1780 [Roseobacter denitrificans OCh 114]
gi|109455194|gb|ABG31399.1| hypothetical protein RD1_1780 [Roseobacter denitrificans OCh 114]
Length = 256
Score = 95.0 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 75/201 (37%), Gaps = 6/201 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + + + Y W+A L++++I+ A W + +G+ AL
Sbjct: 41 EVNEEVRRDRFYLMLRR--YGWVAALVVVLIVGGAAWSEYRKAQARAEAERLGDQILDAL 98
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L ++ + I + + + A+ G+ A +VA D
Sbjct: 99 SLSE---PATRQAGLDTIDTATPGAAAVV-RLLSAAEAQQAGELDAALAALEQVAVDGDV 154
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A ++ + DT E + L+ L+ P P+ A E L + + G + A
Sbjct: 155 PEIYRQIAAFKSIVLQADTMDPSERRQQLEALAVPGAPLSFLAQEQLALMEVAAGNTEAA 214
Query: 182 KTIFEELAKDNNSPFGISTRS 202
++ + + + + R+
Sbjct: 215 LAQYQSILQAEGASADLQQRA 235
>gi|114771863|ref|ZP_01449256.1| hypothetical protein OM2255_13007 [alpha proteobacterium HTCC2255]
gi|114547679|gb|EAU50570.1| hypothetical protein OM2255_13007 [alpha proteobacterium HTCC2255]
Length = 225
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 9/205 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + K K Y WI ++I ++ A + + + G+ AL
Sbjct: 21 EVSEEVRKDKLFALYKK--YAWIPVVVICSLVGGAGFLEYQKSAKANAASARGDALIAAL 78
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+++ + ++S++ P++ ++ A +L+ + D + ++ +
Sbjct: 79 NQDDASIRASELA----LISENGGDEAPIAKLHRAGVLLEQDDIAGSLAVYDSM---SGG 131
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A L+A I + + + L ++ P N A E I+ + G KA
Sbjct: 132 DDIYSQVAMLKAIMIRGNKMDNDTRMQALDAIATPGNAFRVIAMEQKAIAYIDMGNSDKA 191
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
IF L ++ + + RS+ ++
Sbjct: 192 IEIFSTLIEEADVSQALIARSKQMI 216
>gi|163736773|ref|ZP_02144192.1| hypothetical protein RGBS107_16616 [Phaeobacter gallaeciensis
BS107]
gi|161390643|gb|EDQ14993.1| hypothetical protein RGBS107_16616 [Phaeobacter gallaeciensis
BS107]
Length = 223
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 78/211 (36%), Gaps = 6/211 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + Y WI + +++I+ A E +G+ AL
Sbjct: 10 EVTEEVRRDRLFKMLKR--YGWIGGIAVVLIVGGAALREYNRAQTEAASQALGDQMIAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ +S A + I ++ + + + A L GD A E VA +
Sbjct: 68 DSDDSAARATA---LDAITAETAGG-DTVLKLLQAGALADAGDRAAAVERLNAVARNGEM 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
PL R+ AT +A + ++ + + L++P P+ A E L + ++ A
Sbjct: 124 PLIYRHIATFKALGLQQESLPAADRRIQFEALAQPGAPLALLAQEQLALIDIEEDNTDAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ +E+ + R+ ++ + +
Sbjct: 184 ISRLQEIIASAGVTSDLKDRASQVIVALGGA 214
>gi|163743208|ref|ZP_02150590.1| hypothetical protein RG210_14945 [Phaeobacter gallaeciensis 2.10]
gi|161383625|gb|EDQ08012.1| hypothetical protein RG210_14945 [Phaeobacter gallaeciensis 2.10]
Length = 223
Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 79/211 (37%), Gaps = 6/211 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + Y WI + +++I+ A E +G+ AL
Sbjct: 10 EVTEEVRRDRLFKMLKR--YGWIGGIAVVLIVGGAALREYNRAQTEAASQALGDQMIAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ +S A + I ++ + + + A L GD A E VA +
Sbjct: 68 DSDDSAARATA---LDAITAETAGG-DTVLKLLQAGALADAGDRAAAVERLNAVARNGEM 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
PL R+ AT +A + ++ + + L++P P+ A E L + ++ + A
Sbjct: 124 PLIYRHIATFKALGLQQESLPAADRRIQFEALAQPGAPLALLAQEQLALIDIEEDNTEAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ +E+ + R+ ++ + +
Sbjct: 184 ISRLQEIIASAGVTSDLKDRASQVIVALGGA 214
>gi|154253926|ref|YP_001414750.1| hypothetical protein Plav_3494 [Parvibaculum lavamentivorans DS-1]
gi|154157876|gb|ABS65093.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
Length = 240
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E D + K I ++ L+++ AI + ++ F + +
Sbjct: 7 EVEEDLRREQFSKLWDKYGAWLIGAVVALVLVVAAI--VGWRAWSHSQRVEASARFEETV 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+A ++F ++ + Y L+ ++ A +A G+ A ++ +VAN A
Sbjct: 65 IKAQDAAPAEAAAAFAELAESTSGGYAVLARLHEADKRLAAGERDVALAVYGEVAN-GGA 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P VR A ++ +LVDT+SY+++ + L + ++P + A E+L ++A++ G+ + A
Sbjct: 124 PAIVRGMARIKEGLLLVDTASYDDMKARMSPLVDSASPWRENALELLALAAMRDGEWEDA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANI 209
+ + +P G+ R+ +I A +
Sbjct: 184 NRNAAAIIANQATPAGLRDRAHVIQALV 211
>gi|260575152|ref|ZP_05843153.1| conserved hypothetical protein [Rhodobacter sp. SW2]
gi|259022774|gb|EEW26069.1| conserved hypothetical protein [Rhodobacter sp. SW2]
Length = 215
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 7/182 (3%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WI LL+++++ A + S G+ ALE + A
Sbjct: 27 YGWIGILLVVLVVGGAAFSEWNKASKRAAAQAFGDAVLAALEAPDP-----AARRAALAA 81
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ + N+ +AS D A KVA D P+A R A L+ +
Sbjct: 82 VPASGDRAAILNLMLASDPAT--DRAGALAALDKVAADTTLPVAYRDLAVLRRVVLAGAD 139
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ + L ++ P P A E L ++ G A T + L D +P G+
Sbjct: 140 MAVADRRAALDPIAAPGRPFRPLALEQLAYLQIEAGDTAAAITALQALTVDQEAPSGLRQ 199
Query: 201 RS 202
R+
Sbjct: 200 RA 201
>gi|254294313|ref|YP_003060336.1| hypothetical protein Hbal_1955 [Hirschia baltica ATCC 49814]
gi|254042844|gb|ACT59639.1| conserved hypothetical protein [Hirschia baltica ATCC 49814]
Length = 240
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 5/215 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + K K + + I ++ +A Y FD K+ G F L
Sbjct: 7 EVEENVKADKLNRFWNK-AWPFALGGSIAIVAMVAANSY-FDEQATKEIEANGRTFELGL 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ +++ RS F +L +D+ + + + L GDT AA+ A +
Sbjct: 65 KSLEIQDVENTRSRFGALLDKDSGFADLAAQYLAQAELEMAGDTLAAAKALEISAQGEG- 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A L+AA +L DT S E+ L L + A+E++G A + G +++A
Sbjct: 124 --PLADLAKLKAAYLLADTQSLAEVEAALGDLVGNEDSFGALAHELIGAKAFEEGDMERA 181
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
++ ++ L N+P G+ R+ LA I A + N
Sbjct: 182 RSEYQALTLRLNAPEGVLNRANDALAVIPALTETN 216
>gi|163797495|ref|ZP_02191446.1| hypothetical protein BAL199_23462 [alpha proteobacterium BAL199]
gi|159177244|gb|EDP61803.1| hypothetical protein BAL199_23462 [alpha proteobacterium BAL199]
Length = 212
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 4/205 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + W+ + ++L+++ + S + K +G+ + A
Sbjct: 7 EIDEELQQERAAKLWQRYG-GWLIAAAVGVVLAVSGNVFWNRYSTQLKAE-MGDRYEAAA 64
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
EL S D +F + Y L+ + A+ L GDT+ A +F KVA D
Sbjct: 65 ELVVSGNPKDGAQAFAALADDAGAGYATLARLREAAALATAGDTEAAILVFRKVATDAKP 124
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A L+A + + T + L + NP A E L+ G+ KA
Sbjct: 125 P--YADLARLRAVRLGIGTGDTSALLSELAPVLAAGNPWRPLAAETEAAIHLRAGETGKA 182
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
TI++ LA D ++P + R+ ++
Sbjct: 183 LTIYKSLADDASTPSQLRARAAEMV 207
>gi|163746869|ref|ZP_02154226.1| hypothetical protein OIHEL45_15739 [Oceanibulbus indolifex HEL-45]
gi|161379983|gb|EDQ04395.1| hypothetical protein OIHEL45_15739 [Oceanibulbus indolifex HEL-45]
Length = 234
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 9/214 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + M + Y WIA + ++ I+ A W + +G+ AL
Sbjct: 10 EVNEEVRRDRLYGLMRR--YGWIAVVAVIAIVGGAAWNEYSKAQERAQAEALGDAMLAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E SN +A I ++ L+ M A L G+ A E +A D
Sbjct: 68 EADASNARAEA---LAPIEAEGPGANAVLNFMR-ADALAEAGEIDAAVEQLDAIALDGDL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A +A ++ + E + L+ L++P + A E L + ++ G+ KA
Sbjct: 124 APIYRQLAQFKAVTLQGQSVPVAERRQALEALAQPGAALRLLAEEQLALIDIQEGETGKA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
++ + D + + R+ L I+A +
Sbjct: 184 VARYQSILSDAETTPDLQQRA---LQVIVALGKE 214
>gi|89068272|ref|ZP_01155682.1| hypothetical protein OG2516_02384 [Oceanicola granulosus HTCC2516]
gi|89046189|gb|EAR52247.1| hypothetical protein OG2516_02384 [Oceanicola granulosus HTCC2516]
Length = 234
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 8/211 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + + + Y WIA L++++I+ A W + + +G+ A
Sbjct: 10 EVNEEVRRDRLYGYLRR--YGWIAALVVVLIVGGAAWSEWSRAREQARAQELGDALLAAA 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E+ ++ A + ++ M A GD+ A +A+D
Sbjct: 68 EMEDAEARAAALEA-----LAPEGPAVAVAGMLAAEAQAEAGDSAAATATLAALADDPEV 122
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A L+A + +T S E + +L+ P P A E ++ + G + A
Sbjct: 123 PPLYRDLAALKALMLD-ETMSPAERAAAFGELARPGAPFRMVALEQQALAEVAAGDAETA 181
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ +D + + R+ ++ +
Sbjct: 182 LDTLARIIRDADVSQDLRDRATTLMVALGGE 212
>gi|163733997|ref|ZP_02141438.1| hypothetical protein RLO149_03624 [Roseobacter litoralis Och 149]
gi|161392533|gb|EDQ16861.1| hypothetical protein RLO149_03624 [Roseobacter litoralis Och 149]
Length = 225
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 78/201 (38%), Gaps = 6/201 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ K + + Y W+A L++++I+ A W + +G+ AL
Sbjct: 10 EVNDEVRRDKFYLMLRR--YGWVAALVVVLIVGGAAWSEYRKAQTRAEAERLGDQILNAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + ++ + I ++ + + A+ G+T A + +VA D
Sbjct: 68 SL---GEPATRQAGLDTINAETPTA-KAVVRLLAAAEAQQAGETDTALQALEQVAVDGDV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A ++ + DT E + L+ L+ P P+ A E + + + G A
Sbjct: 124 PEIYRQIAAFKSIVLQADTMDPSERRQQLEALAVPGAPLSFLAQEQIALMEVAAGNTDAA 183
Query: 182 KTIFEELAKDNNSPFGISTRS 202
++ + + + R+
Sbjct: 184 LAQYQSILQAAGVSADLQQRA 204
>gi|255261721|ref|ZP_05341063.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255104056|gb|EET46730.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 231
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N++ + K Y W+A L+++ ++ A W E + +G+ AL
Sbjct: 10 EVNDEVREDQLFQTFRK--YGWVAALVVVALVGGAAWSEFSKSRTENQAKALGDAVLDAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E DA ++ E I + N ++ + A+ L +AA++ V+ D
Sbjct: 68 ETEE---PVDAVAALETIDATGNAA--AVTALLRAAELQRADAAADAADVLDSVSLDGDV 122
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R AT +A + DT E LS+P NP + E + + ++ ++ A
Sbjct: 123 DPIYRDLATFKALLLRADTLDASERRAGFHALSQPGNPYRLMSVEQIALLDVEADDLEAA 182
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIA 211
F + +D + G+ R++ ++ + A
Sbjct: 183 LRGFAAILEDAEATTGLRRRARGMIVALGA 212
>gi|126739023|ref|ZP_01754717.1| hypothetical protein RSK20926_21524 [Roseobacter sp. SK209-2-6]
gi|126719640|gb|EBA16348.1| hypothetical protein RSK20926_21524 [Roseobacter sp. SK209-2-6]
Length = 223
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 6/211 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + + Y WI L +++I+ A + + E +G+ AL
Sbjct: 10 EVTEEVRRDRLFLMLKR--YGWIGGLAVILIVGGATFREINKSKAETAAQDLGDELLAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
K +A KI + ++ + A LV D A VA +
Sbjct: 68 VHDEDAKRAEA---LSKIAADTEGGKAVVALLQ-AGALVNADDRDAAVARLESVAVNGEL 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P+ R+ A+ +A + ++ S EE + L++P P+ A+E + + ++ G + A
Sbjct: 124 PMIYRHIASFKALLLQQESLSLEERRIQFEALAQPGAPLALLASEQIALLEIEQGNTEAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIAS 212
T +++ D ++ + R+ ++ + S
Sbjct: 184 ITRLQQITVDASAAADLKERASQVIVALGGS 214
>gi|119385152|ref|YP_916208.1| hypothetical protein Pden_2425 [Paracoccus denitrificans PD1222]
gi|119374919|gb|ABL70512.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 246
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 72/208 (34%), Gaps = 8/208 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E D + + Y WIA L+IL I+ A W E + G+ A
Sbjct: 26 EVTEDLRRDRLFALFRR--YGWIALLVILGIVGGAAWREYSSSQAETRARAWGDAIMAA- 82
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ DD ++ + + LS M A G + AAE A
Sbjct: 83 -----RQGDDPITALSAVDPAGSAGRKVLSEMLAAGAEAQAGLPQKAAERLKAAAAGLQN 137
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A L+A + E ++L LS+P P A E ++ + G+ + A
Sbjct: 138 DPVLHDLALLKAVMVAGPAMDAAERDRLLADLSKPGAPFELLALEQKAVALIGAGRTEDA 197
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANI 209
+ ++ + + + R ++ +
Sbjct: 198 VMLIGQIQQKDGLSEPLRRRLSEMMITL 225
>gi|114799082|ref|YP_759500.1| hypothetical protein HNE_0772 [Hyphomonas neptunium ATCC 15444]
gi|114739256|gb|ABI77381.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 238
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 3/213 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + K K + L+I +A+ ++ E+++ +
Sbjct: 7 EVDEGIRQEKLAGLWKKWRPFVYGGVAALII-GVAVNEFVLKPQAEQRRQERALALESGI 65
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ ++A ++F KI+++D KL ++ + GD AAE+ V +
Sbjct: 66 RALEDARYEEAEAAFTKIMNEDPKLAPLAAHFLAQTKYEGGGDAAAAAELLASVGGTEGG 125
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A L++A DT S EE+ L L+ + + A E++ A + G +A
Sbjct: 126 P--YERLALLKSAYFKADTQSLEELELSLGSLANDDSTVGALARELIAAKAFEAGDFARA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+T + L D +P G+ R+++ LA I + +
Sbjct: 184 RTAYNRLRLDAFAPQGLVRRAEIALAAIPVTAE 216
>gi|114762904|ref|ZP_01442336.1| hypothetical protein 1100011001359_R2601_26321 [Pelagibaca
bermudensis HTCC2601]
gi|114544514|gb|EAU47521.1| hypothetical protein R2601_26321 [Roseovarius sp. HTCC2601]
Length = 218
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 10/207 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + M + Y WIA LL+++++ A W + +G+ AL
Sbjct: 10 EVTEEVRRDRLFAAMKR--YGWIAVLLVILLVGGAAWREYSNAQSRSAAQALGDEILAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNK--LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
E D+A++ + D L M AS D + AA VA +
Sbjct: 68 EA------DEAQARVAALSEIDAPTPGAEALIAMLTASEAARAEDMEAAALSLESVAANG 121
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
P R A+ +A S S +E L+ L+ P P+ A E L + ++ G
Sbjct: 122 EVPEIYREIASYKAMSQAGSGLSIDERRAGLESLAVPGKPLRLLAEEQLALLDIEAGDRL 181
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMIL 206
A+ + +D+ + G+ R+ ++
Sbjct: 182 AAEERLRRIVEDSEATAGLRQRASQMI 208
>gi|254466513|ref|ZP_05079924.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206687421|gb|EDZ47903.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 223
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 78/192 (40%), Gaps = 4/192 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WI + + +I+ A + +G+ AL++ + + +++ +
Sbjct: 27 YGWIGGVAVALIVGGAAFREYNKAQERAAAEDLGDQITAALKV----EGSEDQAAALAAV 82
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ + ++ M + L G T AA VA D PL R+ A+ +A S+ +T
Sbjct: 83 TAPGAGGHAIAAMLEVAALAEAGKTAEAAARLEAVAIDGELPLIYRHIASFKALSLQAET 142
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
S + + L++P P+ A+E L + ++ G A E+A D +
Sbjct: 143 LSVADRRLQYEALAQPGAPLALLASEQLALLDIEDGNNDAAIARLREIAADAAVSGDLKD 202
Query: 201 RSQMILANIIAS 212
R+ ++ + S
Sbjct: 203 RASQVIVALGGS 214
>gi|83594416|ref|YP_428168.1| hypothetical protein Rru_A3086 [Rhodospirillum rubrum ATCC 11170]
gi|83577330|gb|ABC23881.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 253
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 3/200 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E D + + IA +++++ + + ++ F A
Sbjct: 18 EVEEDLRHERLAEIWKQYGGLIIAAAVVVVLAVAGV--QGWRVYQADQRAEQAARFDAAR 75
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + + + Y PL+ + A+ L +G T A + + + ND A
Sbjct: 76 DRLAKGDSAALEDL-AALAADRSSGYAPLAALRRAAALADEGKTDEAIQGYRGLINDSAA 134
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R AA + A + EI +LQ L + + P A E+ +S+L+ G + A
Sbjct: 135 DPVFRDAARVLAVLHGLTLLDPAEIGGLLQPLRDGTGPWRPLAEELAAVSSLRQGDSKAA 194
Query: 182 KTIFEELAKDNNSPFGISTR 201
I + D +P G+ R
Sbjct: 195 IEILRGILGDPQAPRGVRQR 214
>gi|99080830|ref|YP_612984.1| hypothetical protein TM1040_0989 [Ruegeria sp. TM1040]
gi|99037110|gb|ABF63722.1| hypothetical protein TM1040_0989 [Ruegeria sp. TM1040]
Length = 222
Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WI +L+I+ A W + VG+ + AL ++ +AR++ +
Sbjct: 27 YGWIGAAAVLLIVGGASWREYSNAKAVGAAQDVGDKISAAL----ASDAPEARAAALAEI 82
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
S D + + A+ LV G+ + AA + +A + R A ++ ++ +T
Sbjct: 83 SADQAGAQAVVDFAQAAALVDAGEVEQAAALLDGIAQNGDLAQVYRDIAAFKSVTLQAET 142
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ EE L+ L+ M A+E L + ++ G+ A ++A +
Sbjct: 143 LAPEERRLRLETLAAAGGTMQFLASEQLALLDIEEGETDAALARLRDIAASAGVSRDLQE 202
Query: 201 RS-QMILANIIASDQRNKK 218
R Q+I+A + D+ ++
Sbjct: 203 RVSQVIVALGGSLDEAAQE 221
>gi|221639111|ref|YP_002525373.1| hypothetical protein RSKD131_1012 [Rhodobacter sphaeroides KD131]
gi|221159892|gb|ACM00872.1| Hypothetical Protein RSKD131_1012 [Rhodobacter sphaeroides KD131]
Length = 215
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 9/214 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + Y WIA + ++ ++ A + + G+ AL
Sbjct: 10 EVTEEVRRERLFGYFRR--YGWIALVAVIALVGGAAYIEWQKSQDAAESQAFGDAILTAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E ++ A ++ L ++ +AS A D + VA +
Sbjct: 68 EAPDAAARRAAVAA-----IPAEGARAALRDLMVASDPAA--DRAASLRALEGVAANAAL 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A R A L+ + + L +++ P P A E + ++ GK +A
Sbjct: 121 DPAFRDLAVLRRVILAGAEMPVADRRAALDEIAAPGRPYRTLALEQMAYLDVEAGKPAEA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
L +D + G+ R++ ++ + Q
Sbjct: 181 IQTLRNLVQDQEATQGLRRRAEQMITALGGDTQA 214
>gi|126462122|ref|YP_001043236.1| hypothetical protein Rsph17029_1354 [Rhodobacter sphaeroides ATCC
17029]
gi|126103786|gb|ABN76464.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
Length = 215
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 9/214 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + Y WIA + ++ ++ A + + G+ AL
Sbjct: 10 EVTEEVRRERLFGYFRR--YGWIALVAVIALVGGAAYIEWQKSQDAAESQAFGDAILTAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E ++ A ++ L ++ +AS A D + VA +
Sbjct: 68 EAPDAAARRAAVAA-----IPAEGARAALRDLMVASDPAA--DRAASLRALEGVAANATL 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A R A L+ + + L +++ P P A E + ++ G+ +A
Sbjct: 121 DPAFRDLAVLRRVILAGAEMPVADRRAALDEIAAPGRPYRTLALEQMAYLDVEAGRPAEA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
L +D + G+ R++ ++ + Q
Sbjct: 181 IQTLRSLVQDQEATQGLRRRAEQMITALGGDTQA 214
>gi|332558126|ref|ZP_08412448.1| hypothetical protein RSWS8N_03705 [Rhodobacter sphaeroides WS8N]
gi|332275838|gb|EGJ21153.1| hypothetical protein RSWS8N_03705 [Rhodobacter sphaeroides WS8N]
Length = 215
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 9/214 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + Y WIA + ++ ++ A + + G+ AL
Sbjct: 10 EVTEEVRRERLFGYFRR--YGWIALVAVIALVGGAAYIEWQKSQDAAESQAFGDAILTAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E ++ A ++ L ++ +AS A D + VA +
Sbjct: 68 EAPDAAARRAAVAA-----IPAEGARAALRDLMVASDPAA--DRAASLRALEGVAANATL 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A R A L+ + + L +++ P P A E + ++ GK +A
Sbjct: 121 DPAFRDLAVLRRVILAGAEMPVADRRAALDEIAAPGRPYRTLALEQMAYLDVETGKPAEA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
L +D + G+ R++ ++ + Q
Sbjct: 181 IQTLRNLVQDQEATQGLRRRAEQMITALGGDTQA 214
>gi|85703429|ref|ZP_01034533.1| hypothetical protein ROS217_21847 [Roseovarius sp. 217]
gi|85672357|gb|EAQ27214.1| hypothetical protein ROS217_21847 [Roseovarius sp. 217]
Length = 257
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 71/205 (34%), Gaps = 7/205 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + M + Y WIA L ILM++ A W +G+ AL
Sbjct: 38 EVTEEVRRDRLFALMRR--YGWIAVLAILMLVGGAAWNEWRKAQDRAAAQALGDAMLAAL 95
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ DA I Q+ + +A+ A + AAE L +A+
Sbjct: 96 ATEDRAARADA---LNAIEVQNPQT--EAVIALLAAAEAAAETPETAAERLLALADRPDV 150
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R ATL+A + E L L+ + A E L + L+ G +A
Sbjct: 151 DAVYRNLATLKAVMLPGSGLDAEARRTRLNGLALSGGVLRLLAEEQLALIDLETGNRTEA 210
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
+A D + G+ R ++
Sbjct: 211 VARLTAIATDAEATTGLRRRVTQVI 235
>gi|254511213|ref|ZP_05123280.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221534924|gb|EEE37912.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 223
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 4/177 (2%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
+ + +G+ AL N + +S + + Q L+ + AS
Sbjct: 44 FNEYRKARDTSQAEALGDAILSALS---ENGATERVASLQAVEPQSVGGDAVLNMLLSAS 100
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
+ G ++A +A P R A+ +A + DT + + + L+ P
Sbjct: 101 -QIEAGSEQDAVNSLNAIATQGDLPEIYRAIASFKALLLQTDTMPVADRRQQFEALAIPG 159
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
P+ A E L + + G Q A + L +D + + R+ ++ + Q
Sbjct: 160 APLRLLAEEQLALIDVAEGNTQAALDRLQALRQDAEASVDLQQRAAQLIVALGGEPQ 216
>gi|146278198|ref|YP_001168357.1| hypothetical protein Rsph17025_2162 [Rhodobacter sphaeroides ATCC
17025]
gi|145556439|gb|ABP71052.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17025]
Length = 215
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 9/214 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + Y WIA ++++ I+ A + H + G+ AL
Sbjct: 10 EVTEEVRRERLFGYFRR--YGWIALVIVVAIVGGAAFVEWQKAQHRAESQAFGDALLAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E ++ A + L ++ AS GD A +VA D
Sbjct: 68 EAPDAAARRAAVEA-----VPAAGDRAALRDLMAASDPA--GDRAAAMAALERVAADATL 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A L+ + + L ++EP P A E + ++ G+ +A
Sbjct: 121 SPVYRDLAVLRRVILGGAELPVADRRAALDGIAEPGRPYRALALEQMAYLEIEAGEPARA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
L +D +P G+ R++ + + Q
Sbjct: 181 IETLRSLTQDQEAPQGLRRRAEQTITALGGGTQA 214
>gi|149913924|ref|ZP_01902456.1| hypothetical protein RAZWK3B_18013 [Roseobacter sp. AzwK-3b]
gi|149812208|gb|EDM72039.1| hypothetical protein RAZWK3B_18013 [Roseobacter sp. AzwK-3b]
Length = 224
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 7/205 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + M + Y WIA LL+L+++ W + + G+ AL
Sbjct: 13 EVSEEVRRDRLFGLMRR--YGWIAVLLVLLLVGGTAWNEWRKAQERQTAQVFGDAVLAAL 70
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E + D ++ + + + + +A+ + + AA + +A
Sbjct: 71 EADSR---DARAAALSGVEAPNPGA--AVMRDLLAAAEASDATPQEAASRLMALAESSGI 125
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R ATL+A ++ S E+ L+ L+ A E L + ++ G A
Sbjct: 126 EPVYRQIATLKAVAMPDSGLSVEDRRTRLEGLALAEGLTRLLAEEQLAMIDIETGDTGAA 185
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
+ D S G+ R+ ++
Sbjct: 186 LERLVAIVGDAQSTPGLRRRASQVI 210
>gi|77463248|ref|YP_352752.1| hypothetical protein RSP_2697 [Rhodobacter sphaeroides 2.4.1]
gi|77387666|gb|ABA78851.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 215
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 68/214 (31%), Gaps = 9/214 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + Y WIA + ++ ++ A + + G+
Sbjct: 10 EVTEEVRRERLFGYFRR--YGWIALVAVIALVGGAAYIEWQKSQDAAESQAFGDAI---- 63
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L D A L ++ +AS A D + VA +
Sbjct: 64 -LAALEAPDAAARRAAVAAIPAEGARAALRDLMVASDPAA--DRAASLRALEGVAANATL 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A R A L+ + + L +++ P P A E + ++ GK +A
Sbjct: 121 DPAFRDLAVLRRVILAGAEMPVADRRAALDEIAAPGRPYRTLALEQMAYLDVEAGKPAEA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
L +D + G+ R++ ++ + Q
Sbjct: 181 IQTLRNLVQDQEATQGLRRRAEQMITALGGDTQA 214
>gi|68171273|ref|ZP_00544675.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67999320|gb|EAM85967.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 200
Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 4/174 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
KWI +++++++ A + HEK +G+ AL + ++ + +
Sbjct: 13 KWICGIIVVLLVVFAGMVSWVNNRHEKLSQRMGDMMYDAL-MGEVSEH-EMIKILNDVAK 70
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
D Y L+ +A + + A I+ +A D +R A L+
Sbjct: 71 VDGSNYQYLAKFKLAGMYGE-NEVAKAQSIYADLAADKRLMPELRELAEYLEIIALLKGE 129
Query: 142 SYEEISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ + +QK LS S E + + LK + A + +E+ + +S
Sbjct: 130 DLDLLKSKVQKFLSTKSEVYKSSIKEAIAVYMLKNNNIDGAIEVIKEIVGNADS 183
>gi|310815834|ref|YP_003963798.1| hypothetical protein EIO_1363 [Ketogulonicigenium vulgare Y25]
gi|308754569|gb|ADO42498.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 216
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 7/210 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + Y IA ++I+++L LAIW+ + + + G+ AL
Sbjct: 10 EVTEEVRRERLFTFFRR--YGGIALIVIVVLLGLAIWYEVSRHNQTAEVRARGDALLSAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E + S+ +I + ++ A GD A VA D A
Sbjct: 68 EGPAEGR----ASALAQIDA-GEGAVAAVTAFLQADAAADAGDVAGAVATLDAVARDSAA 122
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R ATL++A + L+ L ++ A E L + L+ G V A
Sbjct: 123 PRLYRDLATLKSAITGAGVTDANLRRAALEGLVAQNSTYLSLAREQLALIDLETGNVDAA 182
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIA 211
++ + + D + +R +L + A
Sbjct: 183 RSALQAMVDDAATSDVQRSRIAALLEALGA 212
>gi|88658346|ref|YP_507649.1| hypothetical protein ECH_0854 [Ehrlichia chaffeensis str. Arkansas]
gi|88599803|gb|ABD45272.1| conserved hypothetical protein [Ehrlichia chaffeensis str.
Arkansas]
Length = 189
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 4/174 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
KWI +++++++ A + HEK +G+ AL + ++ + +
Sbjct: 2 KWICGIIVVLLVVFAGMVSWVNNRHEKLSQRMGDMMYDAL-MGEVSEH-EMIKILNDVAK 59
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
D Y L+ +A + + A I+ +A D +R A L+
Sbjct: 60 VDGSNYQYLAKFKLAGMYGE-NEVAKAQSIYADLAADKRLMPELRELAEYLEIIALLKGE 118
Query: 142 SYEEISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ + +QK LS S E + + LK + A + +E+ + +S
Sbjct: 119 DLDLLKSKVQKFLSTKSEVYKSSIKEAIAVYMLKNNNIDGAIEVIKEIVGNADS 172
>gi|148259764|ref|YP_001233891.1| hypothetical protein Acry_0752 [Acidiphilium cryptum JF-5]
gi|146401445|gb|ABQ29972.1| Uncharacterized protein-like protein [Acidiphilium cryptum JF-5]
Length = 247
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 80/218 (36%), Gaps = 10/218 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIV-------G 54
E D + + + + + A ++L++ W H++
Sbjct: 32 EVAEDLRAERTREFLMRYAGAL-AGAAAFVLLAIGGWKAWQWHRHQQDLKAADRYVTLTS 90
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ Q L S + DA Y L+ + A++ GD K A +++
Sbjct: 91 QIGQQEAGLTKSGDIGDA-KRLVDFAGTAPAGYANLARLRAAALYAQAGDLKTAGQLWAA 149
Query: 115 VAN-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
VA + A V A L A + ++ L L++P NP A L + +
Sbjct: 150 VAAPNSGATPPVHDLALLLLAQHEMGVKPDADVRARLATLNKPGNPWQPLAQLDLALLDM 209
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
K GK + A + EE++ D SP + +Q ++A +
Sbjct: 210 KAGKTKSAHGLLEEVSADPASPPNLRNLAQGLIAKLNG 247
>gi|57238975|ref|YP_180111.1| hypothetical protein Erum2440 [Ehrlichia ruminantium str.
Welgevonden]
gi|58578912|ref|YP_197124.1| hypothetical protein ERWE_CDS_02480 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161054|emb|CAH57961.1| putative integral membrane protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58417538|emb|CAI26742.1| Hypothetical protein ERWE_CDS_02480 [Ehrlichia ruminantium str.
Welgevonden]
Length = 220
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
KW+ L++L+++ A + ++K VG+ L N D+ I+
Sbjct: 33 KWVGLLVLLLLVISAGVLSWINLQNQKTSQRVGDMMYNI--LMNDVGNDEMVKILNDIIK 90
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV--- 138
+ Y L+ +ASI + A I+ ++AND+ +R A L+
Sbjct: 91 GEKSNYQYLAKFKLASIYSE-DKVEEARVIYAELANDEKLMPELREFARYLEIITLLKMD 149
Query: 139 DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL--AKDNNS 194
D+ ++ + L LS+ SN EI+ IS +K V+KA + +E+ A D+++
Sbjct: 150 DSGLLKDRIQKL--LSQKSNVYKSSDKEIVAISMIKDNDVEKAVGVIKEIIGASDSDA 205
>gi|326403268|ref|YP_004283349.1| hypothetical protein ACMV_11200 [Acidiphilium multivorum AIU301]
gi|325050129|dbj|BAJ80467.1| hypothetical protein ACMV_11200 [Acidiphilium multivorum AIU301]
Length = 222
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 80/218 (36%), Gaps = 10/218 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIV-------G 54
E D + + + + + A ++L++ W H++
Sbjct: 7 EVAEDLRAERTREFLMRYAGAL-AGAAAFVLLAIGGWKAWQWHRHQQDLKAADRYVTLTS 65
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ Q L S + DA Y L+ + A++ GD K A +++
Sbjct: 66 QIGQQEAGLTKSGDIGDA-KRLVDFAGTAPAGYANLARLRAAALYAQAGDLKTAGQLWAA 124
Query: 115 VAN-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
VA + A V A L A + ++ L L++P NP A L + +
Sbjct: 125 VAAPNSGATPPVHDLALLLLAQHEMGVKPDADVRARLATLNKPGNPWQPLAQLDLALLDM 184
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
K GK + A + EE++ D SP + +Q ++A +
Sbjct: 185 KAGKTKSAHGLLEEVSADPASPPNLRNLAQGLIAKLNG 222
>gi|294677826|ref|YP_003578441.1| hypothetical protein RCAP_rcc02304 [Rhodobacter capsulatus SB 1003]
gi|294476646|gb|ADE86034.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003]
Length = 214
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 8/201 (3%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLD 70
+ + Y WI + IL ++ + + + G+ AL +
Sbjct: 17 RDRLFAAFRKYGWIGVVAILGLVGGSAYVEWSKTQRAARAEAFGDGILSAL---EAENPS 73
Query: 71 DARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAAT 130
+A ++ Q + + A+ G A VA D P ++R A
Sbjct: 74 EALAALPVAGPQGG-----MRKLLTAAQAAEDGKVDLALADLRAVAGDATLPDSLRQLAR 128
Query: 131 LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
L+A + E + L L+ P P A E ++AL G A E+
Sbjct: 129 LKAVLVAGAAMGAEARAAELAALAAPGAPFRLMAMEQQALAALDAGDKDGAIAKAREIMA 188
Query: 191 DNNSPFGISTRSQMILANIIA 211
++ G+ R+ ++ +
Sbjct: 189 EDGVTSGLQQRATELIVALEG 209
>gi|58616971|ref|YP_196170.1| hypothetical protein ERGA_CDS_02440 [Ehrlichia ruminantium str.
Gardel]
gi|58416583|emb|CAI27696.1| Hypothetical protein ERGA_CDS_02440 [Ehrlichia ruminantium str.
Gardel]
Length = 220
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
KW+ L++L+++ A + ++K VG+ L N D+ I+
Sbjct: 33 KWVGLLVLLLLVISAGVLSWINSQNQKTSQRVGDVMYNI--LMNDVGNDEMVKILNDIIK 90
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV--- 138
+ Y L+ +ASI + A ++ ++AND+ +R A L+
Sbjct: 91 GEKSNYQYLAKFKLASIYSE-DKVEEARMMYAELANDEKLMPELREFARYLEIITLLKMD 149
Query: 139 DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL--AKDNNS 194
D ++ + L LS+ SN EI+ IS +K V+KA + +E+ A D+++
Sbjct: 150 DAGLLKDRIQKL--LSQKSNVYKSSDKEIVAISMIKDNDVEKAVGVIKEIIGASDSDA 205
>gi|73666867|ref|YP_302883.1| hypothetical protein Ecaj_0236 [Ehrlichia canis str. Jake]
gi|72394008|gb|AAZ68285.1| conserved hypothetical protein [Ehrlichia canis str. Jake]
Length = 200
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 72/187 (38%), Gaps = 4/187 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
KW+ + ++ ++ A + +EK +G+ A L N D+ +
Sbjct: 13 KWVCVVAVMSLIVFAGMVSWVNSRNEKVSQHMGDMMYDA--LMNEISDDEMIKILNDVAK 70
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
D Y L+ +AS+ T+ A I+ +A D +R A L+ +
Sbjct: 71 IDESSYQYLAKFKLASMYGE-DKTEEAQSIYADLAADKRLTPELRELAEYLEVITLLKGN 129
Query: 142 SYEEISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ + + +Q+ LS+ S E + +S LK + A + +E+ +S +
Sbjct: 130 NLDLLKNKVQQFLSKRSEVYTSSIKEAIAVSMLKNNDISGAVGVIKEIVVSADSEPIVYK 189
Query: 201 RSQMILA 207
+ +L
Sbjct: 190 NAMDLLQ 196
>gi|159043713|ref|YP_001532507.1| hypothetical protein Dshi_1164 [Dinoroseobacter shibae DFL 12]
gi|157911473|gb|ABV92906.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 217
Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 9/205 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + M K Y WI L +++I+ A + G+ AL
Sbjct: 10 EVAEEVRRDRMSRLMRK--YGWIGVLAVVLIVGGAAFNEYRKAQEIAAAQAFGDAVYDAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E + A + + + + GD AAEI V D
Sbjct: 68 EGSSEQTRLLALQEVNAPEVGAP-------LLGLITAAESTGDPAEAAEILQSVITDPET 120
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P + A L+ + E +L L S P A E + ++ G+ + A
Sbjct: 121 PPIYQDLARLRLVLLGDAALPATERRALLDMLILGSGPFRLLALEQRALLEVEAGETEAA 180
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
+E+ + + R+ ++
Sbjct: 181 IATLQEVIRAAGASLAQQQRAAQLV 205
>gi|149204179|ref|ZP_01881147.1| hypothetical protein RTM1035_11675 [Roseovarius sp. TM1035]
gi|149142621|gb|EDM30666.1| hypothetical protein RTM1035_11675 [Roseovarius sp. TM1035]
Length = 229
Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 7/205 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + M + Y WIA L ILM++ A W + +G+ A
Sbjct: 10 EVTEEVRRDRLFALMRR--YGWIAVLAILMLVGGAAWNEWRKAQDQAAAQALGDAVLAA- 66
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L ++ A ++ + I + + + ++ + A + A + +A+
Sbjct: 67 -LATEDRSARA-AALDAIEAPGAQAGSVIALLAAAEEAADTPEAAAARLL--ALADRSDV 122
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R ATL+A + E L L+ + A E L + L+ G A
Sbjct: 123 DAVYRNIATLKAVMLPGSGLDAEARRGRLNGLALSGGVLRLLAEEQLALIDLETGNRDAA 182
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
+A D + G+ R ++
Sbjct: 183 LERLGAIASDAEATMGLRRRVTQVI 207
>gi|83952355|ref|ZP_00961086.1| hypothetical protein ISM_09396 [Roseovarius nubinhibens ISM]
gi|83836028|gb|EAP75326.1| hypothetical protein ISM_09396 [Roseovarius nubinhibens ISM]
Length = 206
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 9/188 (4%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y WIA L +L+++ A + + +G+ ALE D+A + +
Sbjct: 4 YGWIAVLAVLLLVGGAAYNEWRKANERAAAEALGDGILAALEQ------DEAEARVTALQ 57
Query: 81 SQDNK--LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+ D + + + A + D K AE + +A P+ R ATL+AA+I
Sbjct: 58 AIDAPDPSADAVVTLLAAGESLGS-DPKATAEALVALAERGDVPMVYRQIATLKAAAIGA 116
Query: 139 DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+ + E ++L L+ + + A E L ++ G + A T E L D + G+
Sbjct: 117 EGLAAETRRELLDGLALGTGTIRVLAEEQLAYLDIETGNQEAALTRLEALYVDAEASEGL 176
Query: 199 STRSQMIL 206
R I+
Sbjct: 177 RQRVGQIV 184
>gi|260427043|ref|ZP_05781022.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260421535|gb|EEX14786.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 218
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 6/205 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + M + + W+A LL+L+++ A W + +G+ AL
Sbjct: 10 EVTEEVRRDRLFAFMKR--WGWVAVLLVLVLVGGAAWREYTSVRDQAAAQALGDEILAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + S+ +I + L +M AS GD A + VA++
Sbjct: 68 DADEAGAR---VSALSEISAAGPGA-QALIDMLTASEAARAGDADAAEQALEAVASNGDV 123
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P R A+ +A S S E+ L+ L+ P P+ A E L + ++ G A
Sbjct: 124 PEIYREIASYKAFSRSDSGLSAEDRRVGLEALAVPGKPLRLLAEEQLALLEIEQGDTDAA 183
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
+ + +D+ + G+ R+ ++
Sbjct: 184 TARLQRIIEDSEATAGLRQRASQLI 208
>gi|89054689|ref|YP_510140.1| hypothetical protein Jann_2198 [Jannaschia sp. CCS1]
gi|88864238|gb|ABD55115.1| hypothetical protein Jann_2198 [Jannaschia sp. CCS1]
Length = 304
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 8/205 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + + M + + WI L+++ I+ A +F + + G+ AL
Sbjct: 30 EVSEEVRRDRLYALMRR--WGWIPILVVIAIVGGAAYFEWQNAQQRAQAEAFGDALLSAL 87
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ ++ A + + ++ + + A D AA A
Sbjct: 88 DNEDTQARVAALEAVDVPSAEAG----IILALLAAGETANGEDRAGAAARLRAAAEAPGV 143
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A L+A + D + E L+ L+ P P A E L + ++ G +
Sbjct: 144 ARRYVDLALLKAEML--DPAPEAEARATLEALAAPGAPYSALAEEQLALMEVRAGDLDAG 201
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
+ + + G+ R+ ++
Sbjct: 202 LDRLRAIERSAAATAGLQQRAAQLI 226
>gi|117926863|ref|YP_867480.1| hypothetical protein Mmc1_3589 [Magnetococcus sp. MC-1]
gi|117610619|gb|ABK46074.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
Length = 235
Score = 71.9 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 8/218 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + WI I + LAI+ + D + + + + QAL
Sbjct: 14 EVDEQLAQDRLHKLWENY-KIWIIGSFIGLFAGLAIFVGVRDY-YRAQDQDASDRYIQAL 71
Query: 62 ELFNSNKLDDARSSFEKIL-SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
E + ++L A + + + Y LS++ A +L +GD A ++
Sbjct: 72 EALDKDQLKVAAEALKGLQTKHGEHGYGLLSHLSEAQMLAKQGDFDGAVASLDRLITLAK 131
Query: 121 APL-AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A A+ A + AA +L + + L + +P + A E+ G+ A G +
Sbjct: 132 AGQPAMADLARINAAYLL--SKQPQRAMVYLDAMRDP-SAYSAHAYELRGVLAQAAGDNK 188
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
A + +++ A N P +S R + + D K
Sbjct: 189 LALSHYQK-AMQFNPPNTLSQRLMEHMVRMGGMDAVRK 225
>gi|126725457|ref|ZP_01741299.1| hypothetical protein RB2150_04613 [Rhodobacterales bacterium
HTCC2150]
gi|126704661|gb|EBA03752.1| hypothetical protein RB2150_04613 [Rhodobacterales bacterium
HTCC2150]
Length = 215
Score = 71.9 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 81/214 (37%), Gaps = 8/214 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + + + K Y WIA + +++++ A + S + +G+ AL
Sbjct: 10 EVNEEVRRDQLYTYLRK--YGWIAAVAVVVLVGGAAYNEYSKASAQSAAQGLGDATMAAL 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + D R++ +I ++ ++ + A+ A D A + ++ A
Sbjct: 68 SIED---RADQRAALGEIGAEGPSA-EIITLLQGAA--AANNDKPAAIASLTAIIDNADA 121
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A L+ + + + +L L+ P A E + ++ G V+ A
Sbjct: 122 EEIYKDLARLKLVMLQGADAPAADRIDMLDALAVPGKAFRLIALEQKAVVLVETGDVEGA 181
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
I +EL + + + R ++ + A +
Sbjct: 182 LVILQELLSEQSLTTDLRQRVTQLIVALGAEPKA 215
>gi|289207921|ref|YP_003459987.1| hypothetical protein TK90_0736 [Thioalkalivibrio sp. K90mix]
gi|288943552|gb|ADC71251.1| Protein of unknown function DUF2133 [Thioalkalivibrio sp. K90mix]
Length = 204
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 7/195 (3%)
Query: 9 SYKGKCKMGKCCYKWIAPLLI---LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + K + K + A +I ++ + I + + G E++ + +
Sbjct: 5 TDEEKAERIKQWWSDNAVAIIAGLVLGIGGLIGWNWWSGHQEERAAGASDMYIAMQGAAQ 64
Query: 66 SNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ A ++++ Q Y L+ ++ A + V++GD + A E A D
Sbjct: 65 TGNNARAMELADQLIEQGRGTPYRSLAWIFRADLAVSEGDHEAAIEALRS-ARDAAPDRG 123
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
R TL+ A ++ Y+ L + E+ G A G A+
Sbjct: 124 YRELLTLRMARQMILAEQYDNAESALGDVRRD--AFRGLRLELEGDLARARGDRDLARER 181
Query: 185 FEELAKDNNSPFGIS 199
+ E ++P +S
Sbjct: 182 YREALDHGHTPEYLS 196
>gi|88607077|ref|YP_505469.1| hypothetical protein APH_0894 [Anaplasma phagocytophilum HZ]
gi|88598140|gb|ABD43610.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ]
Length = 202
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 80/198 (40%), Gaps = 8/198 (4%)
Query: 13 KCKMGKCCYKWIAPLLILMILSL--AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLD 70
+ ++G+ ++ ++ +++L+L + + D EK++ G+ L + +
Sbjct: 3 REEIGQFFVRFKGAIMGVVLLALCASGIAFFLDSRSEKQRIKDGDAIYDVLRRNDGS--- 59
Query: 71 DARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAAT 130
++ + + L+ +A+ V G +A E++ +A D +R A
Sbjct: 60 -VEQRLAEVSNTSKGIVARLAKFKLAAGHVRSGSVVSAKELYYDLAADTGLTRELRELAE 118
Query: 131 LQAASILVDTSSYEE-ISKILQKLSEPSNP-MHQFANEILGISALKFGKVQKAKTIFEEL 188
A + +D +E + + L +L+ + A E L +S L+ V A + +E+
Sbjct: 119 YFAIVLSLDGEDIDEALEERLVRLASGKDSIYRSSAKEALIVSELRKNDVDAAVLVMKEV 178
Query: 189 AKDNNSPFGISTRSQMIL 206
D I + +L
Sbjct: 179 LGDPALNMEIRRNVEGLL 196
>gi|326794516|ref|YP_004312336.1| hypothetical protein Marme_1227 [Marinomonas mediterranea MMB-1]
gi|326545280|gb|ADZ90500.1| Protein of unknown function DUF2133 [Marinomonas mediterranea
MMB-1]
Length = 213
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 78/201 (38%), Gaps = 11/201 (5%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGEN-------F 57
++ + + + + K +K LIL + ++ F + + E
Sbjct: 2 SELKTEEEQIEAFKTWWKKNGTALILAVAVGVGGYFGFQAWKTNEATHISEASSLYQTLI 61
Query: 58 AQALEL-FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A +L N+ D A + + + Y + +++A + V+KG+ A A
Sbjct: 62 EAASDLDTEKNQKDVAALAAQLNEEYSDTGYAMFAELFVAELEVSKGNYDKAITALEA-A 120
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ + AT++ A +L + ++ L+ +++ + NE+ G ++ G
Sbjct: 121 VSGTEDQSFQTIATIRIARLLAEKEDFDAALSKLESVTQ--SEFSVQKNELKGDIYVRQG 178
Query: 177 KVQKAKTIFEELAKDNNSPFG 197
K A+T +E+ +D +
Sbjct: 179 KRDDARTAYEQAKQDLKAGQN 199
>gi|225677202|ref|ZP_03788195.1| hypothetical protein WUni_006950 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590726|gb|EEH11960.1| hypothetical protein WUni_006950 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 204
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 76/204 (37%), Gaps = 17/204 (8%)
Query: 10 YKGKCKMGKCCYKW-------IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
K K M K W I L + +L + L + + K+ G+ F + L
Sbjct: 6 CKSKALMYKYITIWNITMKKYIFLLALAPMLVGITLYLLRNIDNTKQSITAGDKFYEVLF 65
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L NK +L + + + L+N A ++ + A I+ +A+D AP
Sbjct: 66 LKKDNK---------PLLEEIDSNWEYLANFERAFNHISDSMPTDTASIYNDLADDKDAP 116
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+R A L+ S+ E+I+K E S + E + I + V+ A
Sbjct: 117 GVLRELAQYLEVMSLL-HSNGEKINKDKIDNLESSTVYPYSSQEAIAIVKIHNNDVKGAT 175
Query: 183 TIFEELAKDNNSPFGISTRSQMIL 206
I L D P I +Q +L
Sbjct: 176 EILRSLLNDRKCPILIKANAQELL 199
>gi|58698192|ref|ZP_00373113.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630884|ref|YP_002727675.1| hypothetical protein WRi_011980 [Wolbachia sp. wRi]
gi|58535273|gb|EAL59351.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592865|gb|ACN95884.1| hypothetical protein WRi_011980 [Wolbachia sp. wRi]
Length = 204
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 76/204 (37%), Gaps = 17/204 (8%)
Query: 10 YKGKCKMGKCCYKW-------IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
K K M K W I L + +L + L + + K+ G+ F + L
Sbjct: 6 CKSKALMYKYITIWNITMKKYIFLLALAPMLVGITLYLLRNIDNTKQSITAGDKFYEVLF 65
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L NK +L + + + L+N A ++ + A I+ +A+D AP
Sbjct: 66 LKKDNK---------PLLEEIDSNWEYLANFERAFNHISDSMPTDTASIYNDLADDKDAP 116
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+R A L+ S+ E+I+K E S + E + + + V+ A
Sbjct: 117 GVLRELAQYLEVMSLL-HSNGEKINKDKIDNLESSAVYPYSSQEAIAVVKIHNNDVKGAT 175
Query: 183 TIFEELAKDNNSPFGISTRSQMIL 206
I L D P I +Q +L
Sbjct: 176 EILHSLLNDRKCPILIKANAQELL 199
>gi|84684684|ref|ZP_01012584.1| hypothetical protein 1099457000245_RB2654_02209 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667019|gb|EAQ13489.1| hypothetical protein RB2654_02209 [Rhodobacterales bacterium
HTCC2654]
Length = 212
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 61/173 (35%), Gaps = 8/173 (4%)
Query: 40 YLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
+++ G+ A + ++ + ++ + + ++ + + + A
Sbjct: 46 EFLKAREQRQAQATGDAVLAAQD---ADGAEARLAALDGVAAEGDAA-AVIGLIKAAEAE 101
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP 159
+ A E+ + +D P R ATL+ + + +E L L P P
Sbjct: 102 AP----ERADELLAAIESDTSYPALYRDLATLKRVMLPGSPMTADEKVAALDPLLGPGAP 157
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A E L ++ ++ G + A L D + + R+ ++ + +
Sbjct: 158 FRVLAEEQLALAEIEAGDAEAALARLNALMDDAEAGDSLRERASQLIVALGGT 210
>gi|307822497|ref|ZP_07652728.1| Protein of unknown function DUF2133 [Methylobacter tundripaludum
SV96]
gi|307736101|gb|EFO06947.1| Protein of unknown function DUF2133 [Methylobacter tundripaludum
SV96]
Length = 213
Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 76/188 (40%), Gaps = 6/188 (3%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M + + K + I L ++ I+ + W Y D + + Q
Sbjct: 1 MYDSEEEQVEALKRWWKENSTATIVGL-VMGIVIILGWNYWQDHKKAQSAQ-ASATYDQL 58
Query: 61 LELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
L+ + NK D +++ Q Y S ++ A + +GD A +I +A +
Sbjct: 59 LKALDENKNDSVDKLAQRMQEQFKGTEYAAFSGLFQAKLKSQQGDFAAAKQILKTIAAEP 118
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKL-SEPSNPMHQFANEILGISALKFGKV 178
+ A ++ +++ T YE+ +++ ++ ++ + +E++G + ++
Sbjct: 119 N--KQLSNIAKIRLVRLMLATGEYEQGLQVINEVDAKAAASYSANYDELVGDLYVALDRL 176
Query: 179 QKAKTIFE 186
+A+T ++
Sbjct: 177 DEARTSYQ 184
>gi|42521017|ref|NP_966932.1| hypothetical protein WD1220 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410758|gb|AAS14866.1| hypothetical protein WD_1220 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 204
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 10 YKGKCKMGKCCY-------KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
K K M K K+I L + +L + L + + K+ G+ F + L
Sbjct: 6 CKSKALMYKYITIQNITMKKYIFLLALAPMLVGITLYLLRNIDNTKQSITAGDKFYEVLF 65
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L NK +L + + + L+N A ++ + A I+ +A+D AP
Sbjct: 66 LKKDNK---------PLLEEIDSNWEYLANFERAFNHISDSMPTDTASIYNDLADDKDAP 116
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+R A L+ S+ E+I+K E S + E + + + ++ A
Sbjct: 117 NVLRELAQYLEVMSLL-HSNGEKINKDKIDNLESSTVYPYSSQEAIAVVKIHNNDIKGAT 175
Query: 183 TIFEELAKDNNSPFGISTRSQMIL 206
I L D P I +Q +L
Sbjct: 176 EILRSLLNDRKCPILIKANAQELL 199
>gi|152995387|ref|YP_001340222.1| hypothetical protein Mmwyl1_1358 [Marinomonas sp. MWYL1]
gi|150836311|gb|ABR70287.1| conserved hypothetical protein [Marinomonas sp. MWYL1]
Length = 213
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 68/194 (35%), Gaps = 11/194 (5%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGEN-------F 57
++ + + + + K +K +L++ I ++ + + N E
Sbjct: 2 SELKTEEEQIEAFKSWWKKNGVMLVVAIAVAVGGYFGWQAWKTSQTNYTSEASALYQNLV 61
Query: 58 AQALELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ +L + N +++ + Y +++A + G A +
Sbjct: 62 QASADLSDENNQKTVTFIAKQLADDYGDTGYAMFGQLFLARVDAENGKYDEAIKALDDAI 121
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
++ A L+ A +++ Y ++K+SE E++G + G
Sbjct: 122 AKTK-DVSFVAIANLRVARLMLQKEDYAGAMARVEKVSEEE--FAAQQQELIGDILISQG 178
Query: 177 KVQKAKTIFEELAK 190
K A+ +++ ++
Sbjct: 179 KRDDARVAYQKASE 192
>gi|190571453|ref|YP_001975811.1| hypothetical protein WPa_1067 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357725|emb|CAQ55175.1| hypothetical protein WP1067 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 205
Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 73/206 (35%), Gaps = 20/206 (9%)
Query: 10 YKGKCKMGKCCYKW-------IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
K K M K W I L + +L + L + + K+ G+ F + L
Sbjct: 6 CKSKALMYKYITIWNINMKKYIFLLTLAPMLVGITLYLLRNIDNTKQSITAGDKFYEVLF 65
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA-SILVAKGDTKNAAEIFLKVANDDLA 121
L NK +L + + + L+N A + + T A+ I+ +A+D A
Sbjct: 66 LKKDNK---------SLLEEIDSHWEYLANFERAFNHISDSMPTDTASIIYNDLADDKDA 116
Query: 122 PLAVRYAATLQAASILV-DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
P +R A L+ + KI S P + E + I + ++
Sbjct: 117 PDVLRELAQYLEVMSLLHSSGEKTNRDKISNLESNAVYPY--SSQEAIAIVKIHSNDIKG 174
Query: 181 AKTIFEELAKDNNSPFGISTRSQMIL 206
A I L D P I +Q +L
Sbjct: 175 AIEILHSLLNDRECPTLIKANAQELL 200
>gi|58696863|ref|ZP_00372380.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|58536925|gb|EAL60101.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila simulans]
Length = 193
Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 75/197 (38%), Gaps = 10/197 (5%)
Query: 10 YKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKL 69
YK K+I L + +L + L + + K+ G+ F + L L NK
Sbjct: 2 YKYITIWNITMKKYIFLLALAPMLVGITLYLLRNIDNTKQSITAGDKFYEVLFLKKDNK- 60
Query: 70 DDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
+L + + + L+N A ++ + A I+ +A+D AP +R A
Sbjct: 61 --------PLLEEIDSNWEYLANFERAFNHISDSMPTDTASIYNDLADDKDAPGVLRELA 112
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
L+ S+ E+I+K E S + E + + + V+ A I L
Sbjct: 113 QYLEVMSLL-HSNGEKINKDKIDNLESSAVYPYSSQEAIAVVKIHNNDVKGATEILHSLL 171
Query: 190 KDNNSPFGISTRSQMIL 206
D P I +Q +L
Sbjct: 172 NDRKCPILIKANAQELL 188
>gi|238753873|ref|ZP_04615233.1| hypothetical protein yruck0001_6450 [Yersinia ruckeri ATCC 29473]
gi|238707861|gb|EEQ00219.1| hypothetical protein yruck0001_6450 [Yersinia ruckeri ATCC 29473]
Length = 206
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y +F +A E +N + ++ EK
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSH-QVTALTEASSSFQKASEALAANN-AEGVAAAEKFAQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L+ + +A VA+G AA+ +A + + L+ A + +
Sbjct: 81 NNSNNYGVLAGLELAHHFVAQGQFDKAAQQL-SLAQGNTKDENLLSLIHLRLARVQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
E+ K L ++ A +I G + L G V A+ + + ++N+ + +
Sbjct: 140 KPEDALKTLDAVNGDG--WTAMAQDIRGDALLSKGDVAGARAAYTK-GIESNASQALQSL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|99035091|ref|ZP_01314879.1| hypothetical protein Wendoof_01000285 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 182
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 73/185 (39%), Gaps = 10/185 (5%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K+I L + +L + L + + K+ G+ F + L L NK +L
Sbjct: 3 KYIFLLALAPMLVGITLYLLRNIDNTKQSITAGDKFYEVLFLKKDNK---------PLLE 53
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ + + L+N A ++ + A I+ +A+D AP +R A L+ S
Sbjct: 54 EIDSNWEYLANFERAFNHISDSMPTDTASIYNDLADDKDAPNVLRELAQYLEVMSLL-HS 112
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ E+I+K E S + E + + + ++ A I L D P I
Sbjct: 113 NGEKINKDKIDNLESSTVYPYSSQEAIAVVKIHNNDIKGATEILRSLLNDRKCPILIKAN 172
Query: 202 SQMIL 206
+Q +L
Sbjct: 173 AQELL 177
>gi|269958961|ref|YP_003328750.1| hypothetical protein ACIS_00923 [Anaplasma centrale str. Israel]
gi|269848792|gb|ACZ49436.1| hypothetical protein ACIS_00923 [Anaplasma centrale str. Israel]
Length = 201
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 8/176 (4%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+ ++F+ E+ G+ AL+ ++ S E++ S L+
Sbjct: 26 GASGAAFMFENRREEMLERGGDAMYFALK----GAGEEGIKSLEEV-SHGKGAGAHLAKF 80
Query: 94 YIA-SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS-SYEEISKILQ 151
+A S + K D A +++ K+A +R A + + V + +E+ L
Sbjct: 81 RLAHSYVKDKKDVAAARDMYAKLAAVKGLSRELRELAEYLSVVLSVSLGETGDELESRLM 140
Query: 152 KLSEPSNP-MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+L+ + A E L + L+ V A I E+ D S + ++ +L
Sbjct: 141 RLASSKDGVYKSSAKEALVVLQLRRNNVNAAVGIMREVLGDTASSPEVRRTAENLL 196
>gi|58584744|ref|YP_198317.1| hypothetical protein Wbm0487 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419060|gb|AAW71075.1| Predicted protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 181
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 13/186 (6%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K+I L +++IL L + + K+ G F + L NK +L
Sbjct: 3 KYIFLLALVLILVGITLHLLHNIDNTKQSITAGNQFYEILFSKKDNK----------LLE 52
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ + + L+N A ++ +A I+ +A++ P +R A L+
Sbjct: 53 ETDSNWKHLANFEGAFNHISNLTLTDAVSIYSSMADNKDVPNILRELAQYLEIMNLL-HL 111
Query: 142 SYEEI-SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ E+I + L + E + I + ++ A I L D P I
Sbjct: 112 NGEKINENKINNLESSI-VYPYSSQEAIAIVKIHNNDIKGAIKILHLLLNDRKCPTLIKD 170
Query: 201 RSQMIL 206
R+Q +L
Sbjct: 171 RAQELL 176
>gi|85712735|ref|ZP_01043780.1| Uncharacterized conserved membrane protein [Idiomarina baltica
OS145]
gi|85693467|gb|EAQ31420.1| Uncharacterized conserved membrane protein [Idiomarina baltica
OS145]
Length = 205
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 5/187 (2%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M+ + + K + IA +I L L + +D + + +N +
Sbjct: 1 MDQTEEQQVERIKEFWAEHGKGIIAGAII--GLGLFFGWRYYDKATIEAQNTASRGYEAV 58
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ N+ + ++ I S N Y L+ + + +GD A F V D
Sbjct: 59 VSQLNAGEEGAISNAQNFIKSHQNSQYGYLAALQLGRFAADEGDLATAVTSFQSVI-DGG 117
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A + A ++ A +L + Y+ +L E FANEI G + G K
Sbjct: 118 ADDNLAAIARVRLARVLAAQAQYQPALDVLN--VELPKAYLAFANEIKGDVYVAQGDTAK 175
Query: 181 AKTIFEE 187
A+ +E+
Sbjct: 176 AREAYEK 182
>gi|56416623|ref|YP_153697.1| hypothetical protein AM375 [Anaplasma marginale str. St. Maries]
gi|56387855|gb|AAV86442.1| hypothetical protein AM375 [Anaplasma marginale str. St. Maries]
Length = 201
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 8/189 (4%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
++W+ +L+L++L + +LF+ E+ G+ AL+ ++ S E++
Sbjct: 13 FRWLVVVLVLLVLGASGAAFLFENRREEMFERSGDAVYFALK----GTGEEGIKSLEEVS 68
Query: 81 SQDNKLYNPLSNMYIA-SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ L+ +A S + K D A +++ ++A +R A + + +
Sbjct: 69 RDEGAG-AHLAKFRLAHSYVKDKKDVAAARDMYAELAAVKGLARELRELAEYLSVVLSMS 127
Query: 140 TS-SYEEISKILQKLSEPSNP-MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
+ E+ L L+ + A E L + L+ V A +I E+ D S
Sbjct: 128 LGETGPELESRLMHLASSKDGVYKSSAKEALVVLQLRRKDVNYAVSIMREILGDTVSSPE 187
Query: 198 ISTRSQMIL 206
+ + + +L
Sbjct: 188 VKSSVESLL 196
>gi|190574022|ref|YP_001971867.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
gi|190011944|emb|CAQ45565.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
Length = 212
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 12/197 (6%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ S + + + K + + I + + + K + +AL
Sbjct: 8 DEHEQSERVRSWLRKNGASILGGVAIAI--GAIAGWQWYQKDQGGKLASANVEYQKALVG 65
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
NKLDDA + + + + + +Y L+ + +A V G + A V
Sbjct: 66 LQQNKLDDAAKAVKALEAGPSSIYGDLAALQLAKAQVDAGKNEEALATLRAV----KVES 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ A + A +LV T +E K+L + + EI G + + GK A+
Sbjct: 122 DLQRVADQRVARLLVATGKSDEAIKLL------GSATDSSSLEIHGDALMAQGKRDDARA 175
Query: 184 IFEELAKDNNSPFGIST 200
+E+ K +
Sbjct: 176 QYEKALKSLDVAAPQRR 192
>gi|330446669|ref|ZP_08310321.1| histidyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490860|dbj|GAA04818.1| histidyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 203
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 70/175 (40%), Gaps = 4/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K + ++ + L W Y H K ++ +++ Q + + N D + I +
Sbjct: 23 KAVVLGAVIGLGGLWGWRYYQSEVHAAK-HVASDSYTQVVSALDENSKDAVAEAKTFIDA 81
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
Y L+ + +A + V D A E V N+ + AT + A I +
Sbjct: 82 NKGSQYAVLTALQLAKVQVENKDLNGAVEQLQWVLNNTKDEAIL-PLATTRLARIYAEQQ 140
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
++E L+K++ PS E+ G L+ G + A+ + E +D +SP
Sbjct: 141 KFDEALAELKKVTVPS--WKSKVAELRGDILLQKGDITGAREAYVEAQQDGSSPA 193
>gi|84517348|ref|ZP_01004702.1| hypothetical protein SKA53_05930 [Loktanella vestfoldensis SKA53]
gi|84508828|gb|EAQ05291.1| hypothetical protein SKA53_05930 [Loktanella vestfoldensis SKA53]
Length = 235
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 68/205 (33%), Gaps = 9/205 (4%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + K + + Y W+A L++L I+ W
Sbjct: 26 EVTEEMRRDKLFGYLRR--YGWVAVLIVLGIVGGTAWNEYRSAQDRAAAQAA-----GDA 78
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + D+A + ++ + AS G + AA +A +
Sbjct: 79 LLAALAENDEAARATAMAAVSAAGNAAVITALLTASTQQQAGQAEAAAASLSALATNADT 138
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A ++AA + V L L++P P A E + L+ G A
Sbjct: 139 TAIYRDLAAIKAAMLPV--GDMPARLAALAPLAQPGQPFRLLALEQMAYLTLETGDQTGA 196
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
I ++A+D G+S R Q +L
Sbjct: 197 VAILRQIAEDAAVTRGLSDRVQTLL 221
>gi|213018854|ref|ZP_03334662.1| hypothetical protein C1A_627 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995805|gb|EEB56445.1| hypothetical protein C1A_627 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 183
Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 13/187 (6%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K+I L + +L + L + + K+ G+ F + L L NK +L
Sbjct: 3 KYIFLLTLAPMLVGITLYLLRNIDNTKQSITAGDKFYEVLFLKKDNK---------SLLE 53
Query: 82 QDNKLYNPLSNMYIA-SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV-D 139
+ + + L+N A + + T A+ I+ +A+D AP +R A L+
Sbjct: 54 EIDSHWEYLANFERAFNHISDSMPTDTASIIYNDLADDKDAPDVLRELAQYLEVMSLLHS 113
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ KI S P + E + I + ++ A I L D P I
Sbjct: 114 SGEKTNRDKISNLESNAVYPY--SSQEAIAIVKIHSNDIKGAIEILHSLLNDRECPTLIK 171
Query: 200 TRSQMIL 206
+Q +L
Sbjct: 172 ANAQELL 178
>gi|194365438|ref|YP_002028048.1| hypothetical protein Smal_1660 [Stenotrophomonas maltophilia
R551-3]
gi|194348242|gb|ACF51365.1| conserved hypothetical protein [Stenotrophomonas maltophilia
R551-3]
Length = 212
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 12/197 (6%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ S + + + K + ++I + + + K + +AL
Sbjct: 8 DEHEQSERVRSWLRKNGASILGGVVIAI--GAIAGWQWYQKDQGGKLASANVEYQKALVG 65
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
NKLDDA + + + + + +Y L+ + +A V G + A V
Sbjct: 66 LQQNKLDDASKAVKALEAGPSSIYGDLAALQLAKAQVDAGKNEEALATLRAV----KVEG 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ + A +LV T +E K+L + + EI G + + GK A+
Sbjct: 122 DLQRVVDQRVARLLVATGKSDEAIKLL------GSATDSSSLEIHGDALMAQGKRDDARA 175
Query: 184 IFEELAKDNNSPFGIST 200
+E+ K +
Sbjct: 176 QYEKALKSLDVAAPQRR 192
>gi|15603871|ref|NP_246945.1| hypothetical protein PM2006 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722448|gb|AAK04090.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 788
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 73/203 (35%), Gaps = 6/203 (2%)
Query: 17 GKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSF 76
+ + L+ L AI Y + + AL + D A +
Sbjct: 75 AQAQFNLAGILVEKGALDKAIATYCAISREDDPEAYAKAQLQLALIWAEKGEPDKAIKAC 134
Query: 77 EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASI 136
+L +DN + +A I V K + A E + + +D P A A Q A I
Sbjct: 135 NSVLREDNPEAYAKAQFQLAFIFVEKNERDKAIEAYEAILREDS-PEAYAQ-AQFQLALI 192
Query: 137 LVDTSSYEEISKILQKLSEPSNPMHQF-ANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
+ ++ K + NP A L ++ + KA +E + ++ +SP
Sbjct: 193 WAEKGEPDKAIKACNSVLREDNPEAYAKAQFQLAFIFVEKNERDKAIEAYEAILRE-DSP 251
Query: 196 FGISTRSQMILANIIAS-DQRNK 217
+ ++Q LA I A +NK
Sbjct: 252 EAYA-KAQFQLALIWAEKGDKNK 273
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 5/158 (3%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F A L +LD A ++ I D + +A ILV KG A + +
Sbjct: 42 QFNLASILREKGELDKAIETYRTISRGDIPKVYAQAQFNLAGILVEKGALDKAIATYCAI 101
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF-ANEILGISALK 174
+ + P A A LQ A I + ++ K + NP A L ++
Sbjct: 102 SR-EDDPEAYAK-AQLQLALIWAEKGEPDKAIKACNSVLREDNPEAYAKAQFQLAFIFVE 159
Query: 175 FGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ KA +E + ++ +SP + +Q LA I A
Sbjct: 160 KNERDKAIEAYEAILRE-DSPEAYAQ-AQFQLALIWAE 195
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 3/150 (2%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+ + F A N+ D A ++E IL +D+ + +A I KG+
Sbjct: 139 REDNPEAYAKAQFQLAFIFVEKNERDKAIEAYEAILREDSPEAYAQAQFQLALIWAEKGE 198
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF- 163
A + V +D P A A Q A I V+ + ++ + + + +P
Sbjct: 199 PDKAIKACNSVLREDN-PEAYAK-AQFQLAFIFVEKNERDKAIEAYEAILREDSPEAYAK 256
Query: 164 ANEILGISALKFGKVQKAKTIFEELAKDNN 193
A L + + G KA + + +++N
Sbjct: 257 AQFQLALIWAEKGDKNKAIKAYRSVLREDN 286
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 3/150 (2%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+ + F A N+ D A ++E IL +D+ + +A I KGD
Sbjct: 211 REDNPEAYAKAQFQLAFIFVEKNERDKAIEAYEAILREDSPEAYAKAQFQLALIWAEKGD 270
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF- 163
A + + V +D P A A A +L S ++ K + +P
Sbjct: 271 KNKAIKAYRSVLREDN-PDAYAK-AQFNLAFLLSKKSELDKAIKACNSVLREDSPEAYAK 328
Query: 164 ANEILGISALKFGKVQKAKTIFEELAKDNN 193
A L + + G KA + + +++N
Sbjct: 329 AQFQLALIWAEKGDKNKAIKAYRSVLREDN 358
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F QA + ++ + A F KI D LY L+ +ASIL KG+ A E + ++
Sbjct: 8 FDQAKQAYDDGNFEKAIELFNKINPHDKALY-FLAQFNLASILREKGELDKAIETYRTIS 66
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF-ANEILGISALKF 175
P A A ILV+ + ++ +S +P A L + +
Sbjct: 67 R-GDIPKVYAQ-AQFNLAGILVEKGALDKAIATYCAISREDDPEAYAKAQLQLALIWAEK 124
Query: 176 GKVQKAKT 183
G+ KA
Sbjct: 125 GEPDKAIK 132
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+ + F AL + A ++ +L +DN + +A I + K +
Sbjct: 319 REDSPEAYAKAQFQLALIWAEKGDKNKAIKAYRSVLREDNPEAYAKAQFQLACIFIEKDE 378
Query: 105 TKNAAEIFLKVANDDL 120
A + V ++D
Sbjct: 379 PDKAIKACNSVLHEDN 394
>gi|21231433|ref|NP_637350.1| hypothetical protein XCC1985 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768513|ref|YP_243275.1| hypothetical protein XC_2199 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991679|ref|YP_001903689.1| hypothetical protein xccb100_2285 [Xanthomonas campestris pv.
campestris str. B100]
gi|21113103|gb|AAM41274.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573845|gb|AAY49255.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733439|emb|CAP51640.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
Length = 212
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + + + ++ LD A + +Y L+ + +A
Sbjct: 41 WQWWQKRNTTASVEANARYEAVVKSIQGKDLDKAAKDIVALDDGKGGVYAELAALRLAKA 100
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+ G T A + D A ++ + A +L D+ +E K+L +
Sbjct: 101 QMDAGKTAEAIKTL----RDVPAEGELKQIVQQRLARVLTDSGKPDEAIKLLADAQD--- 153
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
+ EI + +K GK +A+ ++ +
Sbjct: 154 ---HTSLEIRADALVKQGKRDEARALYTK 179
>gi|222474989|ref|YP_002563404.1| hypothetical protein AMF_275 [Anaplasma marginale str. Florida]
gi|255002969|ref|ZP_05277933.1| hypothetical protein AmarPR_01471 [Anaplasma marginale str. Puerto
Rico]
gi|255004097|ref|ZP_05278898.1| hypothetical protein AmarV_01626 [Anaplasma marginale str.
Virginia]
gi|222419125|gb|ACM49148.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 201
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 66/176 (37%), Gaps = 8/176 (4%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+ +LF+ E+ G+ AL+ ++ S E++ + L+
Sbjct: 26 GASGAAFLFENRREEMFERSGDAVYFALK----GTGEEGIKSLEEVSRDEGAG-AHLAKF 80
Query: 94 YIA-SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS-SYEEISKILQ 151
+A S + K D A +++ ++A +R A + + + + E+ L
Sbjct: 81 RLAHSYVKDKKDVAAARDMYAELAAVKGLARELRELAEYLSVVLSMSLGETGPELESRLM 140
Query: 152 KLSEPSNP-MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
L+ + A E L + L+ V A +I E+ D S + + + +L
Sbjct: 141 HLASSKDGVYKSSAKEALVVLQLRRKDVNYAVSIMREILGDTASSPEVKSSVESLL 196
>gi|90579363|ref|ZP_01235173.1| hypothetical protein VAS14_06638 [Vibrio angustum S14]
gi|90440196|gb|EAS65377.1| hypothetical protein VAS14_06638 [Vibrio angustum S14]
Length = 203
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 68/175 (38%), Gaps = 4/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K + ++ + L W Y H K + +++ Q + + N D + I +
Sbjct: 23 KAVVLGAVIGLGGLWGWRYYQSEVHAAK-HAASDSYTQVVSALDENSKDAVAEAKTFIDA 81
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
Y L+ + +A + V D A V N+ + AT + A I +
Sbjct: 82 NKGSQYAVLTALQLAKVQVDNKDLDGAVTQLQWVLNNTKDEAIL-PLATTRLARIYAEQQ 140
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
++E L+K++ PS E+ G L+ G + A+ + E ++ +SP
Sbjct: 141 KFDEALAELKKVTVPS--WKSKVAELRGDILLQKGDITGAREAYVEAQQEGSSPA 193
>gi|114332131|ref|YP_748353.1| hypothetical protein Neut_2166 [Nitrosomonas eutropha C91]
gi|114309145|gb|ABI60388.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
Length = 212
Score = 58.1 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 77/206 (37%), Gaps = 8/206 (3%)
Query: 9 SYKGKCKMGKCCYKWIAPLLILMIL---SLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ K K + L+L I+ ++ + L++ ++ + + +
Sbjct: 7 EEQEKIDRLKAWWSANGATLLLTIVVFAAVVVGTRLWNHYKGEQARQAADLYTVLQQQVE 66
Query: 66 SNKLDDARSSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ + ++L Q Y + + A V G+ ++A ++ V + P
Sbjct: 67 KGSEFEKITDAAQLLIQGFPGSGYASRAALIAAHSAVQAGNNQSARDMLQWVLDHTEEPE 126
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ A ++ A++LVD Y++ +L ++ ++ G + GK+ +A+
Sbjct: 127 V-KDLARIRLANVLVDEGKYDQALSLLN--AQHGASFTGLYADLRGDALAASGKIDEARA 183
Query: 184 IFEELAKDNNSPFGISTRSQMILANI 209
+++ ++ QM L +
Sbjct: 184 AYQKALDSLDTQGAYRNVVQMKLDAL 209
>gi|319943738|ref|ZP_08018019.1| tetratricopeptide repeat protein [Lautropia mirabilis ATCC 51599]
gi|319742971|gb|EFV95377.1| tetratricopeptide repeat protein [Lautropia mirabilis ATCC 51599]
Length = 213
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 60/155 (38%), Gaps = 7/155 (4%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-DNKL 86
L ++ L++ + ++ H+ + +A L +S K++ R ++ I + +
Sbjct: 28 LAVIALAVFAGWRAWNWYHDSQAQDAAREYAGLLSAADSGKIEQVRERYDAIQKGYGSSV 87
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
Y ++ + A A V + P + A ++ A +L+D Y+E
Sbjct: 88 YAGMAGLRAAEAFAKANQPDAAVAALESVMKNSTEP-GFKPIAGVRLAGLLLDQKKYDEA 146
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+K + S + + E+ A + G + A
Sbjct: 147 TK-----AIDSGNIGPVSGEMAASVADRRGDILAA 176
>gi|242240153|ref|YP_002988334.1| hypothetical protein Dd703_2735 [Dickeya dadantii Ech703]
gi|242132210|gb|ACS86512.1| conserved hypothetical protein [Dickeya dadantii Ech703]
Length = 208
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE-LFNSNKLDDARSSFEKIL 80
K +A ++L + +L W + + E + QA++ L + + + ++
Sbjct: 23 KALAVGVVLGVGALVGWRFWQNH-QESTAMASSMAYQQAMDTLTAAAGKPEGIAGIQQFA 81
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
++++ Y+ L+++ +A + D A + + + ++ L+ A +L+
Sbjct: 82 AEEHGSYSALASLSLARQYADQNDFPKAEQQLRQALSQTK-DADLQTIVNLRLARVLLQQ 140
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
++ K L + S A ++ G + + G Q A+ + + +N P G+ +
Sbjct: 141 KKADDALKTLD--AVKSAGWLAMAADVRGDALVSKGDTQGARDAYNQ-GIASNPPQGLQS 197
Query: 201 RSQMILANI 209
+M L N+
Sbjct: 198 ILRMKLNNL 206
>gi|254523546|ref|ZP_05135601.1| Tetratricopeptide repeat family protein [Stenotrophomonas sp.
SKA14]
gi|219721137|gb|EED39662.1| Tetratricopeptide repeat family protein [Stenotrophomonas sp.
SKA14]
Length = 212
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 12/197 (6%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ S + + + K + ++I + + + K + +AL
Sbjct: 8 DEHEQSERVRSWLRKNGASILGGVVIAI--GAIAGWQWYQKDQGGKLASANVEYQKALLG 65
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
NKLDDA + + + + + +Y L+ + +A V G + A V
Sbjct: 66 LQQNKLDDASKAVKALEAGPSSIYGDLAALQLAKAQVDAGKNEEALATLRGV----KVEG 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ + A +LV T +E K+L + + EI G + + GK A+
Sbjct: 122 DLQRVVDQRVARLLVATGKSDEAIKLL------GSAADSSSLEIHGDALMAQGKRDDARA 175
Query: 184 IFEELAKDNNSPFGIST 200
+E+ K +
Sbjct: 176 QYEKALKSLDVAAPQRR 192
>gi|198283715|ref|YP_002220036.1| hypothetical protein Lferr_1607 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665406|ref|YP_002426344.1| hypothetical protein AFE_1935 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198248236|gb|ACH83829.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517619|gb|ACK78205.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 203
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 70/186 (37%), Gaps = 4/186 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL-SQD 83
I+++L A+ F+ ++ + + + ++ + + AR+S + ++
Sbjct: 17 VIAGIIIVLLAAMGFFGYEKYQRHQVERAAVLYNELVDTLVAGQTSTARASADTLVHQYG 76
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
+ Y + ++A + A V AP ++ ATL A + +D
Sbjct: 77 HTPYAIFARFFLARMDSESNQIPAAEAELNSVIQAKNAPRGLKSIATLSLARLYLDQ--- 133
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
++ K L L P NEI G + + + KA ++ + + Q
Sbjct: 134 KQAQKALDMLKAPDAAFATLQNEIQGDAYVALHQDGKAMRAYQAAIAALPAADPYRSYLQ 193
Query: 204 MILANI 209
M +ANI
Sbjct: 194 MKMANI 199
>gi|289666004|ref|ZP_06487585.1| hypothetical protein XcampvN_23760 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670464|ref|ZP_06491539.1| hypothetical protein XcampmN_18748 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 212
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 64/184 (34%), Gaps = 12/184 (6%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + + K + IL+ L+L + + + + + ++
Sbjct: 8 DEHEQGERVRSWLRKNGAGLVGG--ILVGLALILGWQWWQKHTNTELVEANTRYQAVVKS 65
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ LD A + +Y L+ + +A V G A + V +
Sbjct: 66 IQAKDLDKAAKDIVALDDGKGGIYAELAALRLAKAQVDAGKNAEAIKTLRDVPAEGELKQ 125
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
V+ + A +L ++ +E K+L + + EI + + GK +A+
Sbjct: 126 IVQQ----RLARVLTESGKPDEAIKLLADAQD------HASLEIRADALVAQGKPDEARA 175
Query: 184 IFEE 187
++ +
Sbjct: 176 LYTK 179
>gi|89072704|ref|ZP_01159269.1| hypothetical protein SKA34_19279 [Photobacterium sp. SKA34]
gi|89051524|gb|EAR56978.1| hypothetical protein SKA34_19279 [Photobacterium sp. SKA34]
Length = 203
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 4/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K + ++ + L W Y H K +I +N+ Q + + N D + I +
Sbjct: 23 KAVVLGAVIGLGGLWGWRYYQSEVHVAK-HIASDNYTQVVSALDENSKDAVAEAKTFIDA 81
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A + V D A E V N + AT + A I +
Sbjct: 82 NKDSQYAVLTALQLAKVQVDNKDLDGAVEQLQWVINHTKDEAIL-PLATTRLARIYAEQQ 140
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
++E L+K++ PS E+ G L+ G + A+ + E ++ +SP
Sbjct: 141 KFDEALAELKKVTVPS--WKSKVAELRGDILLQKGDINGAREAYVEAQQEGSSPA 193
>gi|254449221|ref|ZP_05062670.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
gi|198261198|gb|EDY85494.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
Length = 220
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 5/195 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
A L +++ LS +Y + ++ F + L + D+A + ++++S
Sbjct: 26 AVLGVVLGLSGLFGWYQWQDYQGGQQAGASAVFTELLRGVQEDNTDNAPALADQLVSDYA 85
Query: 85 KL-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y L + A + V GD + AA V D+ + ATL+ A + +
Sbjct: 86 GTHYANLGQLAAARVAVEAGDLETAASRLQWVV-DNASASHFEQVATLRLAQLALGQDQL 144
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
+ ++L + A E+ G A+ G A+ ++ A + P R +
Sbjct: 145 AKAEQLLSG--TFPSSYMAIAEELRGDLAVAQGDSNAARVAYDR-ALNAELPLQNPMRVE 201
Query: 204 MILANIIASDQRNKK 218
M N+ D N +
Sbjct: 202 MKRDNLGNVDLTNTE 216
>gi|238921037|ref|YP_002934552.1| membrane protein [Edwardsiella ictaluri 93-146]
gi|238870606|gb|ACR70317.1| membrane protein [Edwardsiella ictaluri 93-146]
Length = 206
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 6/185 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
S + + + + ++I I +L W Y +++ A E
Sbjct: 5 STENEQVDAIRHFFQEYGKTLVVGVVI-GIGALLGWRYWVGHQQANMAQ-ASQSYQLASE 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ K D S E + ++ Y L+ + +A V K D A A
Sbjct: 63 ALSGGKKDGVMLS-EAFIKENGNNYGVLAALQLAQYEVEKSDFAKAQTQL-AWAEGQAKD 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ ++ + L+ A + + + + K L ++ A +I G LK G + A+
Sbjct: 121 VNLKALSNLRLARVQLQENQLDAALKTLDGVTAKG--WQPLAQDIRGDVLLKKGDAKGAR 178
Query: 183 TIFEE 187
+ +
Sbjct: 179 EAYSK 183
>gi|238758837|ref|ZP_04620010.1| hypothetical protein yaldo0001_24180 [Yersinia aldovae ATCC 35236]
gi|238702945|gb|EEP95489.1| hypothetical protein yaldo0001_24180 [Yersinia aldovae ATCC 35236]
Length = 206
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA +N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQNTAMTEASS-AYQQASNALLANSADGVAIA-EKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V +G+ A + + + L+ A + +
Sbjct: 81 GNKNNYGVLAGLELAHHFVEQGEFDKATQQLSQALGQTKDENLL-SLINLRLARVQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
++ K L + A ++ G + L G + A+ + + ++N+ +
Sbjct: 140 KPDQALKTLDAVQGDG--WTAMAQDVRGDALLSKGDIAGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|285018366|ref|YP_003376077.1| hypothetical protein XALc_1588 [Xanthomonas albilineans GPE PC73]
gi|283473584|emb|CBA16087.1| hypothetical protein, tpr repeat protein [Xanthomonas albilineans]
Length = 212
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 65/184 (35%), Gaps = 12/184 (6%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ S + + + K I + + L + + + + + L+
Sbjct: 8 DEHEQSERVRTWLRKNGAGLIGGIA--LGLGAILGWQWWAKQRSENLAQANSRYEAVLKS 65
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ +LD A ++ + +Y L+ + +A G + A + D
Sbjct: 66 IEAKQLDKAGKDLTQLQQGSSDIYVVLAGLRLAKAQADAGKSDAALATLRALKADG---- 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ + A +L+ E+ K+L ++ + + EI G + + GK A+
Sbjct: 122 EIKRLVDQRMAFLLLQAGKPEDALKLLAS-ADDTRSL-----EIRGDALIAQGKRDAARD 175
Query: 184 IFEE 187
++ +
Sbjct: 176 VYVK 179
>gi|270264727|ref|ZP_06192992.1| tetratricopeptide TPR_4 [Serratia odorifera 4Rx13]
gi|270041410|gb|EFA14509.1| tetratricopeptide TPR_4 [Serratia odorifera 4Rx13]
Length = 206
Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 59/162 (36%), Gaps = 4/162 (2%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
+ +++ + + + + +++ +A + + K DD ++ E ++
Sbjct: 26 AVGVVLGIGALVGWRFWQNHQNSNMMAASQSYQEASDHLAAGKPDDVSAA-EAFAKANSN 84
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
Y L+++ +A V + D A + + + +L+ A + + +E
Sbjct: 85 SYGVLASLELAKHFVEQNDFAKAEQQLVLAQGQTKDDNLL-AMVSLRLARVQLQEKKLDE 143
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
K L + A + G + L G + A+ + +
Sbjct: 144 ALKTLDGVKGEG--WAAMAQDARGDALLAKGDTKGAREAYSK 183
>gi|304322073|ref|YP_003855716.1| hypothetical protein PB2503_12684 [Parvularcula bermudensis
HTCC2503]
gi|303300975|gb|ADM10574.1| hypothetical protein PB2503_12684 [Parvularcula bermudensis
HTCC2503]
Length = 260
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 79/215 (36%), Gaps = 8/215 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E ++D K + + I+ + A F + ++ F++A+
Sbjct: 10 EVDDDLLQDKVMATARRYGPLALGAAAIVTVAVGA--FSITQSRGDRAAVERATLFSEAV 67
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
++ A D LY ++ M A+ L +G AA +A D
Sbjct: 68 AAAEQDESAGAAIMLAAADRLD-GLYQRMAEMQAAAYLAREGLGAEAATELQAIAADGSL 126
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P+ +R A L+A I+ D +++ L + M A E+ + L+ K A
Sbjct: 127 PMRLRDVARLKAGYIMADLDQ--DVAARLAA-DVETPAMKGLARELEALILLEQEKYGDA 183
Query: 182 KTIFEELAKDNNSP--FGISTRSQMILANIIASDQ 214
+LA+ + G++ R++++ A Q
Sbjct: 184 YAALTDLAEGQGAGVTAGLAARARLLAPVADAGRQ 218
>gi|88812663|ref|ZP_01127910.1| hypothetical protein NB231_00720 [Nitrococcus mobilis Nb-231]
gi|88790079|gb|EAR21199.1| hypothetical protein NB231_00720 [Nitrococcus mobilis Nb-231]
Length = 213
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 70/190 (36%), Gaps = 6/190 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + + G+ IA ++I ++ S+ W ++ A +L
Sbjct: 6 SEEEQIDQIRRWWGEYGRSVIAGVIIALV-SILGWQQWHGYRDRQELAAAAAYQALVADL 64
Query: 64 FNSNKLDDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ A+S E++ S+ Y L+ + +A V + D + A + + A D
Sbjct: 65 GD-GNTAAAKSQAEQLQSEHEGSAYAVLAALQMAGQYVKQDDLQAAGKAL-RWAVDHTQL 122
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
A++ A L+ A +L+ + ++ Q P + E++G + A
Sbjct: 123 PALQTIARLRLARVLLGAGDAKAALQVAQP--VPKDAFAGQFQELIGDIHIAQSDQASAI 180
Query: 183 TIFEELAKDN 192
++ D
Sbjct: 181 KAYQAALADG 190
>gi|290475997|ref|YP_003468893.1| hypothetical protein XBJ1_3005 [Xenorhabdus bovienii SS-2004]
gi|289175326|emb|CBJ82129.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
Length = 206
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K++A L+L I LA W Y + F + + S ++ + EK +
Sbjct: 23 KYLAVGLVLGIGVLAGWHYWQSH-QTNQLQDTAATFEKLNKSLESG-SKESVVATEKFAN 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ N +Y +++M +A V + D A + L A+ ++ A+++ A +
Sbjct: 81 ETNNIYGVMADMDLAKRAVEQNDLAQAEKRLLA-ASGKAKDENMQALASIRLARVQFAED 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ K L+++ I G K G + A+ + + + P + +
Sbjct: 140 KTDAALKTLEQVKGKG--WLVAVENIRGDILTKKGDIAGARAAYSR-GLEADGPQSLKSS 196
Query: 202 SQMILANI 209
Q+ L N+
Sbjct: 197 IQIKLNNL 204
>gi|37525334|ref|NP_928678.1| hypothetical protein plu1378 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784761|emb|CAE13671.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 206
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 76/184 (41%), Gaps = 5/184 (2%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L +++ I + + + E F + ++ ++ ++ EK S+ N
Sbjct: 26 VLGLVLGAGALIGWRYWQSHQTNQLQESAEAFER-VDRGLITSTKESHTAAEKFASETNN 84
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
Y +++M++A + V K + A + FL A + ++ ++ A + + +
Sbjct: 85 SYGVMAHMHLAQLAVEKNELTKADQ-FLSAATGQVKNEDLQALVNIRLARVQLAEDKADA 143
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
K L++ + A +I G + +K G + A+ + + +NSP I + +
Sbjct: 144 ALKTLEQ--VKGSGWVGVAEDIRGDALVKKGDIAGARAAYTK-GLSSNSPQAIKSMLNLK 200
Query: 206 LANI 209
L N+
Sbjct: 201 LNNL 204
>gi|332141962|ref|YP_004427700.1| putative membrane-associated protein with TPR-like domain
[Alteromonas macleodii str. 'Deep ecotype']
gi|327551984|gb|AEA98702.1| putative membrane-associated protein with TPR-like domain
[Alteromonas macleodii str. 'Deep ecotype']
Length = 206
Score = 55.4 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 7/180 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+ + K + I L + L W Y + E K + A+E
Sbjct: 5 ATEEQQVEAIKRFWKEHGTAIIVGAA-LGLGGLWGWRYYSETQIESK-EAASVAYQNAVE 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
F S D ++F I + Y ++ + A V GD AA V
Sbjct: 63 TFGSEGSDAKVNAF--IEENKDSGYASIAGLLAAKQAVDAGDLDAAASHLNSVV-TFAEN 119
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ A+L+ + + ++ + + L ++ +E+ G K GK A+
Sbjct: 120 DELKVLASLRLSRVQIEMNQLDAALSTLSNVTND--AFSAEVSELKGDVYQKQGKFDDAR 177
>gi|284006776|emb|CBA72039.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 206
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 62/160 (38%), Gaps = 5/160 (3%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY 87
L++ + ++ W Y ++F Q + A ++ E+ ++ N +Y
Sbjct: 29 LVIGVGAIIGWNYWQSH-QANSLQESAQSFEQISSQLQTGSN-QALAAAEQFANETNNIY 86
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
L+N+ +A I V K D A + LK ++ ++ A + + + ++
Sbjct: 87 GVLTNIELAKIAVEKNDIAGAEKALLKALTIAKVDD-LKDLLNVRLARVQLALNKPDQAL 145
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
L ++ + +I G LK G + A+ + +
Sbjct: 146 ISLTQVQDKG--WSSIVEDIRGDILLKKGDIASARAAYSK 183
>gi|332140451|ref|YP_004426189.1| putative membrane-associated protein with TPR-like domain
[Alteromonas macleodii str. 'Deep ecotype']
gi|327550473|gb|AEA97191.1| putative membrane-associated protein with TPR-like domain
[Alteromonas macleodii str. 'Deep ecotype']
Length = 206
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 7/180 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+ + K + I L + L W Y + E K + A+E
Sbjct: 5 ATEEQQVEAIKRFWKEHGTAIIVGAA-LGLGGLWGWRYYSETQIESK-EAASVAYQNAVE 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
F S D ++F I + Y ++ + A V GD AA V
Sbjct: 63 TFGSEGSDAKVNAF--IEENKDSGYASIAGLLAAKQAVDAGDLDAAASHLNSVV-TFAEN 119
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ A+L+ + + ++ + + L ++ +E+ G K GK A+
Sbjct: 120 DELKVLASLRLSRVQIEMNQLDAALSTLSNVTND--AFSAEISELKGDVYQKQGKFDDAR 177
>gi|4033490|sp|O52728|YA57_ACTAC RecName: Full=UPF0070 protein 1057
gi|2921819|gb|AAC04858.1| hypothetical protein 1057 [Aggregatibacter actinomycetemcomitans]
Length = 204
Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 4/174 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
YK+I ++ + W Y +K + + QAL + + A + I
Sbjct: 22 YKFIIVCFVIAFGGVFGWNYWQSH-QIQKMHKASAEYEQALFNYQKDPKAQAEQFNQFIK 80
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ + Y L+ + A I V D A + + + + L+ AS+
Sbjct: 81 NNEKTSYAVLALLDKAKIAVENKDFPLAEDALKQAMAQSNDD-ILSSVSALRLASVQFQL 139
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ + L+ S + N + G L G + AK +++ ++ +
Sbjct: 140 GQLDPALESLK--SVKEQAWNSAKNLLAGDIQLAKGDKETAKKSYQQAQENAGA 191
>gi|257093697|ref|YP_003167338.1| hypothetical protein CAP2UW1_2113 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046221|gb|ACV35409.1| conserved hypothetical protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 227
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 9 SYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGEN------FAQALE 62
+ + K +K LL+ ++ + +I + G + ++N + +A+
Sbjct: 7 EEQEQIAEIKAWWKQYGNLLLGIVTAASIGVIAWQGWNWYQRNQAAQASMVYGVLQKAVR 66
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++ ++ A + + Y P++ + A + A GDTK A+ + V
Sbjct: 67 ENDAQRIKTAAGEL--LEKYGSTAYAPMAALSAAKAMFAAGDTKTASLQLVWVVEHGKD- 123
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+R A L+ A++L+D +Y+E K L + + + +SA GK +A+
Sbjct: 124 -ELRDLARLRLAAVLLDEKAYDEALKQLAGNTTGGFAVRFLGSRGDVLSA--QGKTAEAR 180
Query: 183 TIFEE 187
++E
Sbjct: 181 AAYQE 185
>gi|261868683|ref|YP_003256605.1| hypothetical protein D11S_2032 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261414015|gb|ACX83386.1| hypothetical protein D11S_2032 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 204
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 4/174 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
YK+I ++ + W Y +K + + QAL + + A + I
Sbjct: 22 YKFIIVCFVIAFGGVFGWNYWQSH-QIQKMHKASAEYEQALFNYQKDPKAQAEQFNQFIK 80
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ + Y L+ + A I V D A + + + + L+ AS+
Sbjct: 81 NNEKTSYAVLALLDKAKIAVENKDFPLAEDALKQAMAQSNDD-ILSSVSALRLASVQFQL 139
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ + L+ S + N + G L G + AK +++ ++ +
Sbjct: 140 GQLDPALESLK--SVKEQAWNSAKNLLAGDIQLAKGDKEAAKKSYQQAQENAGA 191
>gi|91205041|ref|YP_537396.1| hypothetical protein RBE_0226 [Rickettsia bellii RML369-C]
gi|157827612|ref|YP_001496676.1| hypothetical protein A1I_06615 [Rickettsia bellii OSU 85-389]
gi|91068585|gb|ABE04307.1| unknown [Rickettsia bellii RML369-C]
gi|157802916|gb|ABV79639.1| hypothetical protein A1I_06615 [Rickettsia bellii OSU 85-389]
Length = 222
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 68/168 (40%), Gaps = 6/168 (3%)
Query: 51 NIVGENFAQALEL-FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
G+ F +A+ L + A S+ E ++ + ++ + +I ++ A
Sbjct: 54 QKNGDIFVKAVNLEAVQGNKELAISTLENLVGISDTKIKEIALLEQVAIKLSGQQNSEAK 113
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDT-----SSYEEISKILQKLSEPSNPMHQFA 164
++ K+ + V A + S+++D + E++ K L + + P A
Sbjct: 114 DLLSKIIENKEYSEIVTSYARIAWCSLVIDDEKLDIADKEKLVKYLNYFDDENKPFWATA 173
Query: 165 NEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
N + I +K + +A+ L NN+ + +++ +LA + +
Sbjct: 174 NIMKAIWDIKSNMLAEAEKNLRSLVASNNTSDLLKDQAKALLAGLDRA 221
>gi|293391765|ref|ZP_06636099.1| hypothetical protein D7S_1930 [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952299|gb|EFE02418.1| hypothetical protein D7S_1930 [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 204
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 4/174 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
YK+I ++ + W Y +K + + QAL + + A + I
Sbjct: 22 YKFIIVCFVIAFGGVFGWNYWQSY-QVQKMHNASAEYEQALFNYQKDPKAQAEQFNQFIK 80
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ + Y L+ + A I V D A + + + + L+ AS+
Sbjct: 81 NNEKTSYAVLALLDKAKIAVENKDFPLAEDALKQAMAQSNDD-ILSSVSALRLASVQFQL 139
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ + L+ S + N + G L G + AK +++ ++ +
Sbjct: 140 GQLDPALESLK--SVKEQAWNSAKNLLAGDIQLAKGDKEAAKKSYQQAQENAGA 191
>gi|50083799|ref|YP_045309.1| hypothetical protein ACIAD0563 [Acinetobacter sp. ADP1]
gi|49529775|emb|CAG67487.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 233
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 11/187 (5%)
Query: 9 SYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
S + + K K +I IL I F+ + +K A+ +L + +
Sbjct: 5 SEEEQLDNLKSFTKKYGSAIISGILIALIAFFGWQYWQKKTLAENQTRTAKVQQLIDQAQ 64
Query: 69 LDDAR--------SSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVANDD 119
+A ++ +KI+ + + +A I KGD A + K+ N
Sbjct: 65 AAEANPDALNNLYAAADKIVKDAPDSIQAVQTEFLLAKIAYDKGDYATAEKSLKKIENSK 124
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+ + L+ A+ + Y+E K L +++P A E G + +
Sbjct: 125 INDEGLVQLIKLRLANAQLAQKKYDEALKTLSLVTDP--AFKATAEEARGDVYVAKNDIA 182
Query: 180 KAKTIFE 186
A+ ++
Sbjct: 183 SARKAYQ 189
>gi|215487863|ref|YP_002330294.1| hypothetical protein E2348C_2796 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265935|emb|CAS10344.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
Length = 206
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGVLASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|157371842|ref|YP_001479831.1| hypothetical protein Spro_3607 [Serratia proteamaculans 568]
gi|157323606|gb|ABV42703.1| conserved hypothetical protein [Serratia proteamaculans 568]
Length = 206
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 5/166 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + +++ +A + S K DD ++ EK
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHEN-SNMMVASQSYQEASDRLASGKPDDVAAA-EKFAQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L+++ +A V + + A++ +A + L+ A + +
Sbjct: 81 ANSNSYGVLASLELAKHFVEQNEFAKASQQL-VLAQGQTKDENMLSMINLRLARVQLQEK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K L + A + G L G + A+ + +
Sbjct: 140 KLDDALKTLDGVKGEG--WAAMAQDTRGDVLLAKGDTKGAREAYSK 183
>gi|194432129|ref|ZP_03064418.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194419658|gb|EDX35738.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|320180503|gb|EFW55434.1| hypothetical protein SGB_02403 [Shigella boydii ATCC 9905]
gi|332087960|gb|EGI93085.1| hypothetical protein SB521682_2893 [Shigella boydii 5216-82]
gi|332089693|gb|EGI94794.1| hypothetical protein SD15574_2915 [Shigella dysenteriae 155-74]
Length = 206
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A I V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARIQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|253988869|ref|YP_003040225.1| hypothetical protein PAU_01388 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780319|emb|CAQ83480.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 206
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 6/185 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+N + + + L +L +L W Y + + E F Q
Sbjct: 5 TNENEQVDAIRRFFANNGKALVFGL-VLGAGALIGWRY-WQSHQTNQLQTSAEAFEQVNS 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
S ++ ++ EK S+ N Y ++ M +A + V K + A E FL A
Sbjct: 63 GLLSG-TKESNTAVEKFASETNNSYGVMAYMQLAKLAVEKNELAKA-EQFLSTAVGQTKS 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ ++ A + + + K L++ + A ++ G + LK G + A+
Sbjct: 121 ENLQSLVNIRLARVQLAEDKADVALKTLEQ--VKGSGWIAVAEDVRGDALLKKGDIAGAR 178
Query: 183 TIFEE 187
+ +
Sbjct: 179 AAYTK 183
>gi|294340465|emb|CAZ88846.1| conserved hypothetical protein; putative TPR domain [Thiomonas sp.
3As]
Length = 212
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 6/185 (3%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+ +L + +Y + + F Q SN D ++ +
Sbjct: 21 WGTQISAGVLAVAVGFAGYYGWQWWQRNQGAKAAVVFEQVQAAIQSNNPDKIEQAWAVMQ 80
Query: 81 SQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
S+ Y ++ + +A L G + A K A++ A + R A L +++ +D
Sbjct: 81 SKAPGSAYAGMAALAVAKSLHDAGKNEQAIAAL-KWASEHAAGPSARSVARLNLSALQID 139
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
Y E K L + EP+ G A+ G+ A+T +E K P S
Sbjct: 140 AKQYAEAIKTLADVPEPTFAALFDIRR--GDLAMLQGQRDAARTAYEAALK--ALPADSS 195
Query: 200 TRSQM 204
R+ +
Sbjct: 196 QRAAV 200
>gi|319794356|ref|YP_004155996.1| hypothetical protein Varpa_3701 [Variovorax paradoxus EPS]
gi|315596819|gb|ADU37885.1| Protein of unknown function DUF2133 [Variovorax paradoxus EPS]
Length = 230
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 59/187 (31%), Gaps = 4/187 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y + ++L++ + + + K + + S ++ + +
Sbjct: 23 YGTLITWVVLLVAGAFVAWNGWQYFQRNKAAQAAALYDEVERSTQSGDVERIQRVLGDMK 82
Query: 81 SQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ Y + + A L KG + + VA + A L+ A+ L+D
Sbjct: 83 ERFAGTAYAQQAGLLAAKTLYEKGKVEESRAALGWVA-QSAVDPGYQAIAKLRLAAELLD 141
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
SY+E K L + G + GK +A+ + + +
Sbjct: 142 GKSYDEALKQLDG--NVPKEFEPLVADRKGDIYMAQGKRDEAQQEYRKAWTGLGATSDYR 199
Query: 200 TRSQMIL 206
++ L
Sbjct: 200 RLVEIKL 206
>gi|262274785|ref|ZP_06052596.1| membrane protein [Grimontia hollisae CIP 101886]
gi|262221348|gb|EEY72662.1| membrane protein [Grimontia hollisae CIP 101886]
Length = 201
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 50/154 (32%), Gaps = 5/154 (3%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L ++ L + + E + + + Q + + A +
Sbjct: 25 VVLGAVIGLGGLYGWRYYQAEMETGREQASDAYTQVVSALVAGD-AQAEEKAATFIKDHE 83
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y L + +A V GD AAE +V ++ AT++ A + + +Y+
Sbjct: 84 GAYTSLLALQLAKSFVEAGDLTLAAEQLRRV--QSSKDDTLKTLATVRLARVEAELGNYD 141
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
L ++ S E+ G L+ G
Sbjct: 142 AALSQLNSVTTDS--WKAQVEELRGDIELRRGDE 173
>gi|315634911|ref|ZP_07890193.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315476463|gb|EFU67213.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 204
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 8/195 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + ++ K + YK+I ++ + W Y +K + + Q
Sbjct: 5 IEEEQELSAIKA---WWQENYKFIIVCFVIAFGGVFGWNYWQSH-QLQKIHNASAEYEQV 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L + + + I + + Y L+ + A I V D A + +
Sbjct: 61 LFNYAKDPKAQEEQFSQFIKNNEKTGYAVLALLDKAKIAVENQDFAQAEDALKQAVAQST 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+ + L+ A++ ++ + L+ + N ++G L G
Sbjct: 121 DD-VLSSVSALRLAAVQFQLGQFDPALESLKL--VKEQAWNGAKNMLVGDIQLAKGDKDA 177
Query: 181 AKTIFEELAKDNNSP 195
AK+ +++ A+ N +P
Sbjct: 178 AKSAYQQ-AQQNATP 191
>gi|254499339|ref|ZP_05112010.1| transmembrane protein [Legionella drancourtii LLAP12]
gi|254351444|gb|EET10308.1| transmembrane protein [Legionella drancourtii LLAP12]
Length = 220
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 8/189 (4%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ K + Y + + ++L + +K + Q + L
Sbjct: 3 EEEQLESIKKWWKR--YGNVVMFAVSLVLLAVAGYRYLTWHQDKLTQQASIAYEQMM-LA 59
Query: 65 NSNKLDDARSSFEK--ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
SN A S+ I D +Y +++M +A I ++K A ++ D+
Sbjct: 60 MSNHNVKAVKSYANELIKDHDKTVYADVAHMTLAKIYISKNKLDKAQAEL-RIVADNSKM 118
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
L+++ A ++ A IL SY L ++ NE+ G G+ Q+A
Sbjct: 119 LSLKQIAKIRIARILTAEKSYANALTELSRI--EDTTYLPVINELKGDIYGATGQYQEAM 176
Query: 183 TIFEELAKD 191
+ +++ + +
Sbjct: 177 SSYKKASDE 185
>gi|323967961|gb|EGB63373.1| yfgM [Escherichia coli M863]
gi|323977304|gb|EGB72390.1| yfgM [Escherichia coli TW10509]
gi|327252220|gb|EGE63892.1| hypothetical protein ECSTEC7V_3068 [Escherichia coli STEC_7v]
Length = 206
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSTRS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAATQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|304398583|ref|ZP_07380455.1| Protein of unknown function DUF2133 [Pantoea sp. aB]
gi|304353794|gb|EFM18169.1| Protein of unknown function DUF2133 [Pantoea sp. aB]
Length = 205
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 6/194 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
SN + + + K +A +++ I +L W Y + V + Q
Sbjct: 5 SNENEQTDALRNFFANNG-KALAIGVVIGIAALGGWRYWSSHQDDT-AKSVSAQYQQLTS 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ K + + + S+++ Y L+ M +A V G AA + D
Sbjct: 63 AMQAGKP-ETLEAVNRFASENSNTYGALAAMDLAKQYVDAGQLDKAASLLQNGLKDTK-D 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ L+ A I + + + K L + +I G + L G Q A+
Sbjct: 121 ANLQAVINLRLARIQLQQNQADAALKTLDGVKGDG--WTAIVADIRGEALLTKGDKQGAR 178
Query: 183 TIFEELAKDNNSPF 196
+ + + + SP
Sbjct: 179 DAWSKGVESDASPA 192
>gi|111073626|emb|CAL29488.1| hypothetical protein OW2-B [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 202
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 16/187 (8%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K+I L ++ L + I + L++ K+ I G F + L K +L
Sbjct: 25 KYILLLTLIPFLVIIILYSLYNIDSTKQSTIAGNKFYKVLFSKKDIK----------LLE 74
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ + L+N A ++ +AA I+ +A++ P +R A L +
Sbjct: 75 EIGSSWKCLANFESAFNHISNLTPTDAASIYNDMADNQDIPNVLRELAQYLEVMSLFCNN 134
Query: 142 SY--EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
E+ L+ + E + I + ++ A I L D P I
Sbjct: 135 EKINEDKINNLESSIV----YPYSSQEAIAIIKIHNNDIKGAVKILHSLLNDRKCPTLIK 190
Query: 200 TRSQMIL 206
+Q +L
Sbjct: 191 ANAQELL 197
>gi|110834719|ref|YP_693578.1| hypothetical protein ABO_1858 [Alcanivorax borkumensis SK2]
gi|110647830|emb|CAL17306.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 207
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 8/208 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
++ + + + ++L + +L W D E+ +++ +E
Sbjct: 3 DEEEQAELLKEWWQKNGTATIITVVLAVAALIGWREWQDHQGEQSAE-ASKHYQVMVEAL 61
Query: 65 NSNKLDDAR--SSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ ++D+A E + Y +N+ A + V GD ++AA + V +D
Sbjct: 62 TAQEVDEATVNQKAEALKENFPGSAYANYANLAQARLAVQAGDYESAASLLQSVVDDGAT 121
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ Y A L+ +L+ +Y++ + L + + A E+ G A G Q A
Sbjct: 122 DALI-YTARLRLVRVLLQQEAYDKAAAELDN--SFPSAFNGMALELRGDLAKARGDHQAA 178
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANI 209
+ + A + G R QM L ++
Sbjct: 179 TDAYTQ-ALETLQDNGEKDRVQMKLDDL 205
>gi|166712108|ref|ZP_02243315.1| hypothetical protein Xoryp_11790 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 212
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 52/150 (34%), Gaps = 10/150 (6%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
+ + + + ++ + LD+A + +Y L+ + +A
Sbjct: 40 GWQWWQKYTNTELVEANTRYEAVVKSIQAKNLDNAAKDIVALDDGKGGIYAELAALRLAK 99
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
V G A + V + V+ + A +L ++ +E K+L +
Sbjct: 100 AQVDAGKNAEAIKTLRDVPAEGELKQIVQQ----RLARVLTESGKPDEAIKLLADAQD-- 153
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ EI + + GK +A+ ++ +
Sbjct: 154 ----HASLEIRADALVAQGKPDEARALYTK 179
>gi|74313039|ref|YP_311458.1| hypothetical protein SSON_2595 [Shigella sonnei Ss046]
gi|73856516|gb|AAZ89223.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 206
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGKALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|325919428|ref|ZP_08181454.1| hypothetical protein XGA_0393 [Xanthomonas gardneri ATCC 19865]
gi|325550094|gb|EGD20922.1| hypothetical protein XGA_0393 [Xanthomonas gardneri ATCC 19865]
Length = 212
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 50/150 (33%), Gaps = 10/150 (6%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
+ + + + ++ LD A + +Y L+ + +A
Sbjct: 40 GWQWWQKHTNTQSVEANTRYEAVVKSIQGKGLDKAAKEIVALDDGKGGIYAELAALRLAK 99
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
V G A + V + V+ + A +L ++ +E K+L +
Sbjct: 100 AQVDAGKHAEAIKTLRDVPAEGELKQIVQQ----RLARVLTESGKPDEAIKLLADAQD-- 153
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ EI + + GK +A+ ++ +
Sbjct: 154 ----HTSLEIRADALVVQGKPDEARALYGK 179
>gi|161830472|ref|YP_001597098.1| hypothetical protein COXBURSA331_A1392 [Coxiella burnetii RSA 331]
gi|161762339|gb|ABX77981.1| conserved hypothetical protein [Coxiella burnetii RSA 331]
Length = 206
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 5/186 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E +D + K + + IA +++ +L W Y E K + Q
Sbjct: 3 ELLSDQEQIEMIKKWWRDYGRAIALAIVIGLLIGFGWRYWHRHQLE-KTERASALYMQLQ 61
Query: 62 ELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L + N D + ++++ Y +++ A V + A + V +
Sbjct: 62 ILASQNAWDKTKPLTDRLIKDYGKTPYAAMASFLNAKRAVEQNHLPLALDQLQWVMK-NA 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
++ A L+A+ IL+ + + +LQ + EI G G +
Sbjct: 121 IVSDLKQLARLRASRILLAENRPKAALNLLQ--TVDDQAYQPLVGEIKGDIYAAMGNRES 178
Query: 181 AKTIFE 186
AK +E
Sbjct: 179 AKQFYE 184
>gi|16130438|ref|NP_417008.1| conserved protein, UPF0070 family [Escherichia coli str. K-12
substr. MG1655]
gi|82777898|ref|YP_404247.1| hypothetical protein SDY_2709 [Shigella dysenteriae Sd197]
gi|89109319|ref|AP_003099.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|157158004|ref|YP_001463835.1| hypothetical protein EcE24377A_2797 [Escherichia coli E24377A]
gi|157161988|ref|YP_001459306.1| hypothetical protein EcHS_A2664 [Escherichia coli HS]
gi|170019204|ref|YP_001724158.1| hypothetical protein EcolC_1164 [Escherichia coli ATCC 8739]
gi|170082123|ref|YP_001731443.1| hypothetical protein ECDH10B_2679 [Escherichia coli str. K-12
substr. DH10B]
gi|170682168|ref|YP_001744701.1| hypothetical protein EcSMS35_2665 [Escherichia coli SMS-3-5]
gi|187730758|ref|YP_001881304.1| hypothetical protein SbBS512_E2888 [Shigella boydii CDC 3083-94]
gi|188493088|ref|ZP_03000358.1| conserved hypothetical protein [Escherichia coli 53638]
gi|191167663|ref|ZP_03029472.1| conserved hypothetical protein [Escherichia coli B7A]
gi|191172634|ref|ZP_03034173.1| conserved hypothetical protein [Escherichia coli F11]
gi|193064011|ref|ZP_03045096.1| conserved hypothetical protein [Escherichia coli E22]
gi|193068350|ref|ZP_03049313.1| conserved hypothetical protein [Escherichia coli E110019]
gi|194427259|ref|ZP_03059809.1| conserved hypothetical protein [Escherichia coli B171]
gi|194437588|ref|ZP_03069684.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|209919990|ref|YP_002294074.1| hypothetical protein ECSE_2799 [Escherichia coli SE11]
gi|218555038|ref|YP_002387951.1| hypothetical protein ECIAI1_2565 [Escherichia coli IAI1]
gi|218696140|ref|YP_002403807.1| hypothetical protein EC55989_2798 [Escherichia coli 55989]
gi|218706016|ref|YP_002413535.1| hypothetical protein ECUMN_2833 [Escherichia coli UMN026]
gi|238901678|ref|YP_002927474.1| hypothetical protein BWG_2277 [Escherichia coli BW2952]
gi|253772593|ref|YP_003035424.1| hypothetical protein ECBD_1173 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162487|ref|YP_003045595.1| hypothetical protein ECB_02405 [Escherichia coli B str. REL606]
gi|256017339|ref|ZP_05431204.1| hypothetical protein ShiD9_00390 [Shigella sp. D9]
gi|256021801|ref|ZP_05435666.1| hypothetical protein E4_00395 [Escherichia sp. 4_1_40B]
gi|260845143|ref|YP_003222921.1| hypothetical protein ECO103_3030 [Escherichia coli O103:H2 str.
12009]
gi|260856607|ref|YP_003230498.1| hypothetical protein ECO26_3560 [Escherichia coli O26:H11 str.
11368]
gi|260869202|ref|YP_003235604.1| hypothetical protein ECO111_3237 [Escherichia coli O111:H- str.
11128]
gi|291283734|ref|YP_003500552.1| hypothetical protein G2583_3037 [Escherichia coli O55:H7 str.
CB9615]
gi|293405954|ref|ZP_06649946.1| membrane protein [Escherichia coli FVEC1412]
gi|293415778|ref|ZP_06658421.1| yfgM protein [Escherichia coli B185]
gi|293446866|ref|ZP_06663288.1| yfgM protein [Escherichia coli B088]
gi|297518017|ref|ZP_06936403.1| hypothetical protein EcolOP_10297 [Escherichia coli OP50]
gi|298381755|ref|ZP_06991354.1| yfgM protein [Escherichia coli FVEC1302]
gi|300817717|ref|ZP_07097932.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300820817|ref|ZP_07100967.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300898383|ref|ZP_07116726.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300904313|ref|ZP_07122170.1| hypothetical protein HMPREF9536_02398 [Escherichia coli MS 84-1]
gi|300920668|ref|ZP_07137079.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300927124|ref|ZP_07142872.1| hypothetical protein HMPREF9548_05109 [Escherichia coli MS 182-1]
gi|300930153|ref|ZP_07145574.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300951782|ref|ZP_07165597.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300958857|ref|ZP_07170965.1| hypothetical protein HMPREF9547_04549 [Escherichia coli MS 175-1]
gi|300998069|ref|ZP_07181929.1| hypothetical protein HMPREF9553_05402 [Escherichia coli MS 200-1]
gi|301022373|ref|ZP_07186260.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301024745|ref|ZP_07188385.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|301302870|ref|ZP_07208998.1| hypothetical protein HMPREF9347_01448 [Escherichia coli MS 124-1]
gi|301330396|ref|ZP_07223038.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301648268|ref|ZP_07248011.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|307139148|ref|ZP_07498504.1| hypothetical protein EcolH7_13618 [Escherichia coli H736]
gi|307312492|ref|ZP_07592125.1| Protein of unknown function DUF2133 [Escherichia coli W]
gi|309784736|ref|ZP_07679369.1| UPF0070 protein yfgM [Shigella dysenteriae 1617]
gi|309794440|ref|ZP_07688863.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|312965429|ref|ZP_07779661.1| UPF0070 protein yfgM [Escherichia coli 2362-75]
gi|312973246|ref|ZP_07787418.1| UPF0070 protein yfgM [Escherichia coli 1827-70]
gi|331643133|ref|ZP_08344268.1| putative inner membrane protein [Escherichia coli H736]
gi|331653941|ref|ZP_08354942.1| putative inner membrane protein [Escherichia coli M718]
gi|331664076|ref|ZP_08364986.1| putative inner membrane protein [Escherichia coli TA143]
gi|331669259|ref|ZP_08370107.1| putative inner membrane protein [Escherichia coli TA271]
gi|331673968|ref|ZP_08374731.1| putative inner membrane protein [Escherichia coli TA280]
gi|331678504|ref|ZP_08379179.1| putative inner membrane protein [Escherichia coli H591]
gi|332278334|ref|ZP_08390747.1| conserved hypothetical protein [Shigella sp. D9]
gi|4033493|sp|P76576|YFGM_ECOLI RecName: Full=UPF0070 protein yfgM
gi|1788860|gb|AAC75566.1| conserved protein, UPF0070 family [Escherichia coli str. K-12
substr. MG1655]
gi|81242046|gb|ABB62756.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|85675434|dbj|BAA16399.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|157067668|gb|ABV06923.1| conserved hypothetical protein [Escherichia coli HS]
gi|157080034|gb|ABV19742.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|169754132|gb|ACA76831.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
gi|169889958|gb|ACB03665.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|170519886|gb|ACB18064.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187427750|gb|ACD07024.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|188488287|gb|EDU63390.1| conserved hypothetical protein [Escherichia coli 53638]
gi|190902262|gb|EDV62002.1| conserved hypothetical protein [Escherichia coli B7A]
gi|190907107|gb|EDV66707.1| conserved hypothetical protein [Escherichia coli F11]
gi|192929246|gb|EDV82855.1| conserved hypothetical protein [Escherichia coli E22]
gi|192958302|gb|EDV88742.1| conserved hypothetical protein [Escherichia coli E110019]
gi|194414580|gb|EDX30852.1| conserved hypothetical protein [Escherichia coli B171]
gi|194423394|gb|EDX39385.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|209763398|gb|ACI80011.1| hypothetical protein ECs3375 [Escherichia coli]
gi|209763404|gb|ACI80014.1| hypothetical protein ECs3375 [Escherichia coli]
gi|209913249|dbj|BAG78323.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218352872|emb|CAU98671.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218361806|emb|CAQ99405.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218433113|emb|CAR14010.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|238860355|gb|ACR62353.1| conserved protein [Escherichia coli BW2952]
gi|242378111|emb|CAQ32884.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253323637|gb|ACT28239.1| conserved hypothetical protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974388|gb|ACT40059.1| hypothetical protein ECB_02405 [Escherichia coli B str. REL606]
gi|253978555|gb|ACT44225.1| hypothetical protein ECD_02405 [Escherichia coli BL21(DE3)]
gi|257755256|dbj|BAI26758.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257760290|dbj|BAI31787.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257765558|dbj|BAI37053.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260448407|gb|ACX38829.1| conserved hypothetical protein [Escherichia coli DH1]
gi|284922463|emb|CBG35550.1| conserved hypothetical protein [Escherichia coli 042]
gi|290763607|gb|ADD57568.1| UPF0070 protein yfgM [Escherichia coli O55:H7 str. CB9615]
gi|291323696|gb|EFE63124.1| yfgM protein [Escherichia coli B088]
gi|291428162|gb|EFF01189.1| membrane protein [Escherichia coli FVEC1412]
gi|291433426|gb|EFF06405.1| yfgM protein [Escherichia coli B185]
gi|298279197|gb|EFI20711.1| yfgM protein [Escherichia coli FVEC1302]
gi|299881272|gb|EFI89483.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300304048|gb|EFJ58568.1| hypothetical protein HMPREF9553_05402 [Escherichia coli MS 200-1]
gi|300314509|gb|EFJ64293.1| hypothetical protein HMPREF9547_04549 [Escherichia coli MS 175-1]
gi|300357923|gb|EFJ73793.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300396414|gb|EFJ79952.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300403745|gb|EFJ87283.1| hypothetical protein HMPREF9536_02398 [Escherichia coli MS 84-1]
gi|300412349|gb|EFJ95659.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300416894|gb|EFK00205.1| hypothetical protein HMPREF9548_05109 [Escherichia coli MS 182-1]
gi|300448979|gb|EFK12599.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300461959|gb|EFK25452.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300526570|gb|EFK47639.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300529705|gb|EFK50767.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300841805|gb|EFK69565.1| hypothetical protein HMPREF9347_01448 [Escherichia coli MS 124-1]
gi|300843625|gb|EFK71385.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301073655|gb|EFK88461.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306907415|gb|EFN37919.1| Protein of unknown function DUF2133 [Escherichia coli W]
gi|308121896|gb|EFO59158.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|308927106|gb|EFP72580.1| UPF0070 protein yfgM [Shigella dysenteriae 1617]
gi|309702845|emb|CBJ02176.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|310331841|gb|EFP99076.1| UPF0070 protein yfgM [Escherichia coli 1827-70]
gi|312289849|gb|EFR17737.1| UPF0070 protein yfgM [Escherichia coli 2362-75]
gi|315061832|gb|ADT76159.1| conserved hypothetical protein [Escherichia coli W]
gi|315137137|dbj|BAJ44296.1| hypothetical protein ECDH1ME8569_2440 [Escherichia coli DH1]
gi|315256533|gb|EFU36501.1| putative inner membrane protein [Escherichia coli MS 85-1]
gi|315300480|gb|EFU59709.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|315615772|gb|EFU96404.1| UPF0070 protein yfgM [Escherichia coli 3431]
gi|320175076|gb|EFW50189.1| hypothetical protein SDB_02437 [Shigella dysenteriae CDC 74-1112]
gi|320185213|gb|EFW59993.1| hypothetical protein SGF_02749 [Shigella flexneri CDC 796-83]
gi|320200077|gb|EFW74666.1| hypothetical protein ECoL_02913 [Escherichia coli EC4100B]
gi|320640857|gb|EFX10345.1| hypothetical protein ECO5101_04487 [Escherichia coli O157:H7 str.
G5101]
gi|320646300|gb|EFX15227.1| hypothetical protein ECO9389_06673 [Escherichia coli O157:H- str.
493-89]
gi|320651805|gb|EFX20185.1| hypothetical protein ECO2687_02991 [Escherichia coli O157:H- str. H
2687]
gi|320657191|gb|EFX25000.1| hypothetical protein ECO7815_13194 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662797|gb|EFX30129.1| hypothetical protein ECO5905_00861 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320667601|gb|EFX34516.1| hypothetical protein ECOSU61_20448 [Escherichia coli O157:H7 str.
LSU-61]
gi|323156167|gb|EFZ42326.1| hypothetical protein ECEPECA14_1944 [Escherichia coli EPECa14]
gi|323159383|gb|EFZ45368.1| hypothetical protein ECE128010_4434 [Escherichia coli E128010]
gi|323177363|gb|EFZ62951.1| hypothetical protein ECOK1180_3849 [Escherichia coli 1180]
gi|323184426|gb|EFZ69801.1| hypothetical protein ECOK1357_2147 [Escherichia coli 1357]
gi|323188369|gb|EFZ73661.1| hypothetical protein ECRN5871_3475 [Escherichia coli RN587/1]
gi|323377587|gb|ADX49855.1| Protein of unknown function DUF2133 [Escherichia coli KO11]
gi|323936406|gb|EGB32696.1| yfgM [Escherichia coli E1520]
gi|323941225|gb|EGB37410.1| yfgM [Escherichia coli E482]
gi|323944735|gb|EGB40802.1| yfgM [Escherichia coli H120]
gi|323961329|gb|EGB56941.1| yfgM [Escherichia coli H489]
gi|323971074|gb|EGB66322.1| yfgM [Escherichia coli TA007]
gi|324011230|gb|EGB80449.1| hypothetical protein HMPREF9533_04773 [Escherichia coli MS 60-1]
gi|324020073|gb|EGB89292.1| hypothetical protein HMPREF9542_01238 [Escherichia coli MS 117-3]
gi|324118143|gb|EGC12040.1| yfgM [Escherichia coli E1167]
gi|331039931|gb|EGI12151.1| putative inner membrane protein [Escherichia coli H736]
gi|331048790|gb|EGI20866.1| putative inner membrane protein [Escherichia coli M718]
gi|331059875|gb|EGI31852.1| putative inner membrane protein [Escherichia coli TA143]
gi|331064453|gb|EGI36364.1| putative inner membrane protein [Escherichia coli TA271]
gi|331069241|gb|EGI40633.1| putative inner membrane protein [Escherichia coli TA280]
gi|331074964|gb|EGI46284.1| putative inner membrane protein [Escherichia coli H591]
gi|332092742|gb|EGI97811.1| hypothetical protein SB359474_2926 [Shigella boydii 3594-74]
gi|332100686|gb|EGJ04032.1| conserved hypothetical protein [Shigella sp. D9]
gi|332344385|gb|AEE57719.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|333000701|gb|EGK20277.1| hypothetical protein SFVA6_3393 [Shigella flexneri VA-6]
Length = 206
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|218701023|ref|YP_002408652.1| hypothetical protein ECIAI39_2714 [Escherichia coli IAI39]
gi|300940236|ref|ZP_07154834.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|218371009|emb|CAR18837.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|300454932|gb|EFK18425.1| conserved hypothetical protein [Escherichia coli MS 21-1]
Length = 206
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAATQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|225851488|ref|YP_002731722.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
gi|225645952|gb|ACO04138.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
Length = 934
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 15/166 (9%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
WF+ +++K + + +A+ FN+ LD A S + + S +A
Sbjct: 482 GWFFFKKRNYQKAYEAFTDEYMKAVSAFNAGDLDKAYSLVKGKKDRK-------SRFLLA 534
Query: 97 SILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
I + KGD A +I +++ DD A A Y E K + +E
Sbjct: 535 YIFMRKGDIDKARDILRELSKGDDKIAQQ----AGYLYAYSYFSEGKYIEAIKAFRDYAE 590
Query: 156 P--SNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPFGI 198
+ A + S G+ +KA+ I+++ + + N+P I
Sbjct: 591 KYRGTELGNLAVLRMADSYYNAGQKEKARKIYQQFIEEHANTPEAI 636
Score = 42.3 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 63/173 (36%), Gaps = 25/173 (14%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL-------------- 86
++ ++K + + F + E N+ + DA + +++
Sbjct: 609 YYNAGQKEKARKIYQQFIE--EHANTPEAIDAAYQLTVLEMEESGADVASQIEKFIEKYP 666
Query: 87 -YNP--LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y L + + + K + A +I+ ++ A + A + + +
Sbjct: 667 QYPFVSLLKLQLGDLYTEKQEYDKAEKIYRELIE---ADIKESEYALYKLGYLKYISGDK 723
Query: 144 EEISKILQKLSE--PSNPMHQFANEILGISALKFGKVQKAKTIFEEL-AKDNN 193
++ KIL + + P + A E+L + G + KA + ++L A D N
Sbjct: 724 DQAVKILTRYIKIYPRGEFNVQAKELLAKIFEEQGDLDKAIAVMKKLPATDEN 776
>gi|221198079|ref|ZP_03571125.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221204363|ref|ZP_03577380.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221175220|gb|EEE07650.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221182011|gb|EEE14412.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 209
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 78/202 (38%), Gaps = 10/202 (4%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSN-KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N K AR++ + Y ++ + A +L A GDT A + L+ A D
Sbjct: 63 AAANDKTTIARAAADMEDKYGRTAYAQMTALSAAKVLYAAGDTAGA-KAQLQWAADHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPMDAFKGLVADRRGDLLAAQGKTDDAR 179
Query: 183 TIF----EELAKDNNSPFGIST 200
T + + L+KD+ S +
Sbjct: 180 TAYKLALDSLSKDDQSARQLVQ 201
>gi|24113842|ref|NP_708352.1| hypothetical protein SF2559 [Shigella flexneri 2a str. 301]
gi|30063905|ref|NP_838076.1| hypothetical protein S2731 [Shigella flexneri 2a str. 2457T]
gi|82544962|ref|YP_408909.1| hypothetical protein SBO_2537 [Shigella boydii Sb227]
gi|24052933|gb|AAN44059.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042160|gb|AAP17886.1| hypothetical protein S2731 [Shigella flexneri 2a str. 2457T]
gi|81246373|gb|ABB67081.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|281601915|gb|ADA74899.1| conserved hypothetical protein [Shigella flexneri 2002017]
gi|313650999|gb|EFS15399.1| UPF0070 protein yfgM [Shigella flexneri 2a str. 2457T]
gi|332755563|gb|EGJ85927.1| hypothetical protein SFK671_3110 [Shigella flexneri K-671]
gi|332756318|gb|EGJ86669.1| hypothetical protein SF274771_3063 [Shigella flexneri 2747-71]
gi|332766346|gb|EGJ96556.1| hypothetical protein SF293071_3050 [Shigella flexneri 2930-71]
gi|333016243|gb|EGK35574.1| hypothetical protein SFK304_3329 [Shigella flexneri K-304]
Length = 206
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGGILGVGALTGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|161524638|ref|YP_001579650.1| hypothetical protein Bmul_1465 [Burkholderia multivorans ATCC
17616]
gi|189350606|ref|YP_001946234.1| hypothetical protein BMULJ_01778 [Burkholderia multivorans ATCC
17616]
gi|221212771|ref|ZP_03585747.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|160342067|gb|ABX15153.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
gi|189334628|dbj|BAG43698.1| putative membrane protein [Burkholderia multivorans ATCC 17616]
gi|221166984|gb|EED99454.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
Length = 209
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 77/202 (38%), Gaps = 10/202 (4%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + Y ++ + A +L A GDT A + L+ A D
Sbjct: 63 AAANDKATIARAAADMEDKYGRTAYAQMTALSAAKVLYAAGDTAGA-KAQLQWAADHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPMDAFKGLVADRRGDLLAAQGKTDDAR 179
Query: 183 TIF----EELAKDNNSPFGIST 200
T + + L+KD+ S +
Sbjct: 180 TAYKLALDSLSKDDQSARQLVQ 201
>gi|119944925|ref|YP_942605.1| hypothetical protein Ping_1170 [Psychromonas ingrahamii 37]
gi|119863529|gb|ABM03006.1| conserved hypothetical protein [Psychromonas ingrahamii 37]
Length = 226
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEK-ILSQDNK 85
+ ++ L+ + ++ S + + ++ L F S + S I +
Sbjct: 31 IAAVIGLAGLWGWRFYNASVITGQEEASQAYSDMLVKFESQGGEAGLDSIRAFIAGNQDN 90
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
Y L+++ +A V + D A F+++ + + + L+ A + YE+
Sbjct: 91 NYGVLASLLLAKEAVQQKDFALAKAQFVQLQSQNEY-APLNAVINLRLARVEAQLGEYEQ 149
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
K L ++EPS AN++ G L G ++KA+T F+
Sbjct: 150 ALKTLTLITEPS--FLAKANQVKGSIYLNMGDIEKARTAFQ 188
>gi|121604776|ref|YP_982105.1| hypothetical protein Pnap_1874 [Polaromonas naphthalenivorans CJ2]
gi|120593745|gb|ABM37184.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]
Length = 230
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 45/133 (33%), Gaps = 2/133 (1%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y + ++++L + + + F + S + + +
Sbjct: 23 YGNLITWALIVVLGAFAAWNGYQYWQRSQAAQASVMFDEIERAVQSGETARIDRALADMK 82
Query: 81 SQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ + Y + + A KG+ A VA D A + A L+ A IL++
Sbjct: 83 ERFGSTAYAQQAGLLAAKAHYDKGNVDAARAALTWVA-DKAADPGYQAVAKLRLAGILLE 141
Query: 140 TSSYEEISKILQK 152
+Y+E + +
Sbjct: 142 KKAYDEALQQVSG 154
>gi|320157272|ref|YP_004189651.1| hypothetical protein VVM_04008 [Vibrio vulnificus MO6-24/O]
gi|319932584|gb|ADV87448.1| hypothetical protein VVMO6_02426 [Vibrio vulnificus MO6-24/O]
Length = 204
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + + K K + ++ + L W Y D S + + +N+ A+
Sbjct: 5 NTEEEQVEAIKDWWKENGKAVIIGAVVGLGGLFGWRYYQD-SVTQAREAASQNYTSAINA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ + A I S D K Y+ L+ + +A V GD A K A +
Sbjct: 64 LQAKGAEAAADVEAFIASNDVKEYSVLAALQLAKAQVTAGDLNAALTQL-KWAQSNSKDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ T + A + + +++ L K++ E+ G AL+ G + A +
Sbjct: 123 ALIPLTTYRIARVEAELGNFDAAKAELAKVT--DASWTGRVAELRGDIALRQGDKEAAYS 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYSEAQQAADAGQTLQ 196
>gi|197124020|ref|YP_002135971.1| hypothetical protein AnaeK_3630 [Anaeromyxobacter sp. K]
gi|196173869|gb|ACG74842.1| protein of unknown function DUF124 [Anaeromyxobacter sp. K]
Length = 428
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A+ EL D AR++ E+ L K L+ + A +G +AA + ++
Sbjct: 19 LARGTELLAQGDADRARAALERALELGPKDAKVLALLGQACY--RQGQFDDAAIAWQRLV 76
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+++ A A + + +EE + L+ ++ NP H+ A LG++ L+ G
Sbjct: 77 DENPVEPA----ARVNLGLAFLKAKHHEEARRQLE-IALDLNPDHRKAMGYLGLALLESG 131
Query: 177 KVQKAKTIFEELAKD 191
A+ F + D
Sbjct: 132 DPAGAREWFRKAGSD 146
>gi|228474051|ref|ZP_04058792.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
gi|228274565|gb|EEK13406.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
Length = 996
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMY 94
A W I F A L+ NK +A+ + EK L K + Y
Sbjct: 701 AAWAKALGYVKVSDSEIDSAAFDAAERLYVQNKKQEAKVALEKYLKDYPKGTGASQAEFY 760
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL- 153
+A I + A ++ KV ++ ++I ++ +++ +L+++
Sbjct: 761 LAQIYFDENQKDKALPLYEKVLAQGR--NEYSEQVLVRLSNIYLEKEDTDKVLPLLEEIE 818
Query: 154 -SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ FA L + K + KA +++ + + + +++I+A
Sbjct: 819 KTSSVAQNLIFARSNLMKAFYKKKEHAKAIVYAKKILAEKGADNRLKNDARVIMA 873
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 2/113 (1%)
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
Y +N + + KGDTK A + KV Q L E
Sbjct: 100 YATHANFEMGNYYFDKGDTKTAIAWYDKV-QIPTLSAEQHEKFNFQYGYALFAHGDKETA 158
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ L ++ + S + A LG A Q+A F+++ ++ +S
Sbjct: 159 QQYLSQV-KDSKEYGKKAAYYLGYIAYDADDYQQANQFFQQVEQEKELSKNLS 210
>gi|308187768|ref|YP_003931899.1| UPF0070 protein [Pantoea vagans C9-1]
gi|308058278|gb|ADO10450.1| UPF0070 protein [Pantoea vagans C9-1]
Length = 205
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 6/194 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
SN + + + K +A +++ I +L W Y + V + Q
Sbjct: 5 SNENEQTDALRNFFASNG-KALAIGVVIGIAALGGWRYWSSHQDDT-AKSVSAQYQQLTS 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ K + + + S+++ Y L+ M +A V G AA + D
Sbjct: 63 AMQAGKP-ETLEAVSRFASENSNTYGALAAMDLAKQYVDAGQLDKAATLLQNGLKDTK-D 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ L+ A I + + + K L + +I G + L G Q A+
Sbjct: 121 ANLQAVINLRLARIQLQQNQADAALKTLDGVKGDG--WTAIVADIRGEALLTKGDKQGAR 178
Query: 183 TIFEELAKDNNSPF 196
+ + + + SP
Sbjct: 179 DAWSKGVESDASPA 192
>gi|15832629|ref|NP_311402.1| hypothetical protein ECs3375 [Escherichia coli O157:H7 str. Sakai]
gi|168748428|ref|ZP_02773450.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168756285|ref|ZP_02781292.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168761123|ref|ZP_02786130.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168768605|ref|ZP_02793612.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168773573|ref|ZP_02798580.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168778479|ref|ZP_02803486.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168787859|ref|ZP_02812866.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168798884|ref|ZP_02823891.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|195936655|ref|ZP_03082037.1| hypothetical protein EscherichcoliO157_09365 [Escherichia coli
O157:H7 str. EC4024]
gi|208806764|ref|ZP_03249101.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208813431|ref|ZP_03254760.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208820375|ref|ZP_03260695.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209397682|ref|YP_002271983.1| hypothetical protein ECH74115_3737 [Escherichia coli O157:H7 str.
EC4115]
gi|217326764|ref|ZP_03442847.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|254794459|ref|YP_003079296.1| hypothetical protein ECSP_3453 [Escherichia coli O157:H7 str.
TW14359]
gi|261223055|ref|ZP_05937336.1| hypothetical protein EscherichiacoliO157_00410 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259394|ref|ZP_05951927.1| hypothetical protein EscherichiacoliO157EcO_26821 [Escherichia coli
O157:H7 str. FRIK966]
gi|13362845|dbj|BAB36798.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187770561|gb|EDU34405.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188017062|gb|EDU55184.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|189003185|gb|EDU72171.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189356601|gb|EDU75020.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189362284|gb|EDU80703.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189368453|gb|EDU86869.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189372330|gb|EDU90746.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189378605|gb|EDU97021.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|208726565|gb|EDZ76166.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208734708|gb|EDZ83395.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208740498|gb|EDZ88180.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209159082|gb|ACI36515.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209763400|gb|ACI80012.1| hypothetical protein ECs3375 [Escherichia coli]
gi|209763402|gb|ACI80013.1| hypothetical protein ECs3375 [Escherichia coli]
gi|209763406|gb|ACI80015.1| hypothetical protein ECs3375 [Escherichia coli]
gi|217319131|gb|EEC27556.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|254593859|gb|ACT73220.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|320188846|gb|EFW63505.1| hypothetical protein ECoD_03839 [Escherichia coli O157:H7 str.
EC1212]
gi|326340311|gb|EGD64115.1| hypothetical protein ECF_04027 [Escherichia coli O157:H7 str. 1125]
gi|326344995|gb|EGD68739.1| hypothetical protein ECoA_01842 [Escherichia coli O157:H7 str.
1044]
Length = 206
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAIKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|296136230|ref|YP_003643472.1| Protein of unknown function DUF2133 [Thiomonas intermedia K12]
gi|295796352|gb|ADG31142.1| Protein of unknown function DUF2133 [Thiomonas intermedia K12]
Length = 212
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 6/185 (3%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+ +L + +Y + + F Q SN D ++ +
Sbjct: 21 WGTQISAGVLAVAVGFAGYYGWQWWQRSQGAKAAVVFEQVQAALQSNSPDKIEQAWAVMQ 80
Query: 81 SQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
S+ Y ++ + +A L G + A K A++ A + R A L +++ +D
Sbjct: 81 SKAPGSAYAGMAALAVAKSLHDAGKNEQAIAAL-KWASEHAAGPSARSVARLNLSALQID 139
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
Y E K L + EP+ G A+ G+ A+T +E K P S
Sbjct: 140 AKQYAEAIKTLADVPEPTFAALFDIRR--GDLAMLQGQRDAARTAYEAALK--ALPADSS 195
Query: 200 TRSQM 204
R+ +
Sbjct: 196 QRAAV 200
>gi|170023541|ref|YP_001720046.1| hypothetical protein YPK_1295 [Yersinia pseudotuberculosis YPIII]
gi|169750075|gb|ACA67593.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII]
Length = 211
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 7/191 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHE--KKKNIVGENFAQALELFNSNKL-DDARSSFEK 78
K +A ++L I +L W Y + + + + + AL ++ + D+ + EK
Sbjct: 23 KALAVGVVLGIGALVGWRYWQGNQNTVMTEASSAYQKVSTALSTNSAGNVSADSIALAEK 82
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+ + Y L + +A V + AA+ + + L+ A + +
Sbjct: 83 FVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQALGQTKDENLL-SLINLRLARVQL 141
Query: 139 DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+E K L + A ++ G + L G A+ + + A ++N+ +
Sbjct: 142 QLKKPDEALKTLDAVQGDG--WTAMAQDVRGDALLSKGDTAGARAAYSK-AIESNASQAL 198
Query: 199 STRSQMILANI 209
+M L N+
Sbjct: 199 QALLRMKLNNL 209
>gi|218708643|ref|YP_002416264.1| hypothetical protein VS_0621 [Vibrio splendidus LGP32]
gi|218321662|emb|CAV17616.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 204
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+++ + K K + ++ + L W Y D E + E++ A+
Sbjct: 5 DSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAR-EAASESYTSAISA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ +D I + + Y+ L+ M +A V GD A E + A
Sbjct: 64 LDAKGVDAQSDIQAFIDANKDAEYSVLAAMQLAKAQVQAGDLTAALEQL-EWAKSATKDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ T + A I + ++ L+ +++ S E+ G +L+ G A +
Sbjct: 123 ALAPLLTYRVARIKAEQGEFDAALTDLEAMTDESWTGRVA--ELRGDISLRKGDTDAAYS 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYSEAQQAADASQTLQ 196
>gi|26248877|ref|NP_754917.1| hypothetical protein c3035 [Escherichia coli CFT073]
gi|91211839|ref|YP_541825.1| hypothetical protein UTI89_C2834 [Escherichia coli UTI89]
gi|117624742|ref|YP_853655.1| hypothetical protein APECO1_4011 [Escherichia coli APEC O1]
gi|218559439|ref|YP_002392352.1| hypothetical protein ECS88_2689 [Escherichia coli S88]
gi|218690633|ref|YP_002398845.1| hypothetical protein ECED1_2944 [Escherichia coli ED1a]
gi|227887548|ref|ZP_04005353.1| tetratricopeptide repeat family protein [Escherichia coli 83972]
gi|237705023|ref|ZP_04535504.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300981975|ref|ZP_07175821.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301047146|ref|ZP_07194241.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|306814417|ref|ZP_07448579.1| hypothetical protein ECNC101_20287 [Escherichia coli NC101]
gi|331648210|ref|ZP_08349300.1| putative inner membrane protein [Escherichia coli M605]
gi|331658658|ref|ZP_08359602.1| putative inner membrane protein [Escherichia coli TA206]
gi|26109283|gb|AAN81485.1|AE016764_167 Hypothetical protein yfgM [Escherichia coli CFT073]
gi|91073413|gb|ABE08294.1| hypothetical protein YfgM [Escherichia coli UTI89]
gi|115513866|gb|ABJ01941.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218366208|emb|CAR03956.1| conserved hypothetical protein [Escherichia coli S88]
gi|218428197|emb|CAR09114.2| conserved hypothetical protein [Escherichia coli ED1a]
gi|222034224|emb|CAP76965.1| UPF0070 protein yfgM [Escherichia coli LF82]
gi|226901389|gb|EEH87648.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227835898|gb|EEJ46364.1| tetratricopeptide repeat family protein [Escherichia coli 83972]
gi|281179567|dbj|BAI55897.1| conserved hypothetical protein [Escherichia coli SE15]
gi|294491027|gb|ADE89783.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|300300932|gb|EFJ57317.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300408870|gb|EFJ92408.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|305851811|gb|EFM52263.1| hypothetical protein ECNC101_20287 [Escherichia coli NC101]
gi|307554536|gb|ADN47311.1| conserved membrane protein YfgM [Escherichia coli ABU 83972]
gi|307625931|gb|ADN70235.1| hypothetical protein UM146_04140 [Escherichia coli UM146]
gi|312947090|gb|ADR27917.1| hypothetical protein NRG857_12505 [Escherichia coli O83:H1 str. NRG
857C]
gi|315288065|gb|EFU47465.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315292447|gb|EFU51799.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|320196350|gb|EFW70974.1| hypothetical protein EcoM_01743 [Escherichia coli WV_060327]
gi|323949173|gb|EGB45064.1| yfgM [Escherichia coli H252]
gi|323955754|gb|EGB51512.1| yfgM [Escherichia coli H263]
gi|324008521|gb|EGB77740.1| hypothetical protein HMPREF9532_01786 [Escherichia coli MS 57-2]
gi|330912288|gb|EGH40798.1| hypothetical protein ECAA86_02687 [Escherichia coli AA86]
gi|331043070|gb|EGI15210.1| putative inner membrane protein [Escherichia coli M605]
gi|331054323|gb|EGI26350.1| putative inner membrane protein [Escherichia coli TA206]
Length = 206
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDAIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|86159982|ref|YP_466767.1| hypothetical protein Adeh_3564 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776493|gb|ABC83330.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 433
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A+ EL D AR++ E+ L K L+ + A +G +AA + ++
Sbjct: 19 LARGTELLAQGDADRARAALERALELGPKDAKVLALLGQACY--RQGQFDDAAIAWQRLV 76
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+++ A A + + +EE + L+ ++ NP H+ A LG++ L+ G
Sbjct: 77 DENPVEPA----ARVNLGLAFLKAKHHEEARRQLE-IALDLNPDHRKAMGYLGLALLESG 131
Query: 177 KVQKAKTIFEELAKD 191
A+ F + D
Sbjct: 132 DPAAAREWFRKAGSD 146
>gi|257453873|ref|ZP_05619151.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257448800|gb|EEV23765.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 279
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 21/189 (11%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE--------------NFAQALEL 63
K +I +IL++ W Y + A +
Sbjct: 21 KQYGGYILSAIILVLAGYFGWSYWQKHGGNIDTAAANDFAKIQSDQNNIETLTTQAASDT 80
Query: 64 FNSNKLDDARSSFEK-----ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+L A+++ +K + + DN +Y + M A K D K AA K +
Sbjct: 81 KAQAQLTTAQTNLDKDLGEFVANHDNSVYTWQALMLQAKQQTDKNDLKAAAATLQKASQL 140
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
L ++ A L+ A +L+ + + K LQ S EILG A + G
Sbjct: 141 TLKDDGLKAIAILRQAQVLLSDNQADAAQKRLQ--SPLPAAFEASKLEILGDIANQQGDK 198
Query: 179 QKAKTIFEE 187
+ A T +++
Sbjct: 199 KAAATHYQK 207
>gi|300717949|ref|YP_003742752.1| hypothetical protein [Erwinia billingiae Eb661]
gi|299063785|emb|CAX60905.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 206
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 7/209 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
SN + + + + ++I I +LA W Y + + Q
Sbjct: 5 SNENEQVDALRGFFAQNGKALVIGVII-GIGALAGWRYWSSH-EDGSSRETSAAYQQVSG 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+S+K + ++ K S+++ Y L+++ +A AA D
Sbjct: 63 ALDSSKP-ETLAAAAKFASENSNTYGALASLDVAKRYADGNQLDQAAAQLQSGLKDTK-D 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ L+ A I + +E K L + ++ G + L G + A
Sbjct: 121 ANLQAVLNLRLARIQLQQKKPDEAVKTLDLIKGDG--WTAIVADVRGEALLSKGDTKGAH 178
Query: 183 TIFEELAKDNNSPFGISTRSQMILANIIA 211
+ + D+++ + QM + N+
Sbjct: 179 DAWSK-GIDSDASPALKEMLQMKMNNLPG 206
>gi|170767286|ref|ZP_02901739.1| conserved hypothetical protein [Escherichia albertii TW07627]
gi|170123620|gb|EDS92551.1| conserved hypothetical protein [Escherichia albertii TW07627]
Length = 206
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y E ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVESARS-ASLAYQNAVIA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|327394801|dbj|BAK12223.1| transmembrane protein YfgM [Pantoea ananatis AJ13355]
Length = 205
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 6/194 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
SN + + K +A +++ I +L W Y + V + +
Sbjct: 5 SNENEQVDALRRFFANNG-KALAVGVVIGIAALGGWRYWSSHQQDS-AKTVSAEYQKVTR 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ K + + S+++ Y L+ + +A V AA + D
Sbjct: 63 AMQAGKP-ETLEAVNTFASENSNTYGALAALDLAKQYVDSNQLDKAATLLQNGLKDTK-D 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ L+ A I + + + K L + +I G + L G Q A+
Sbjct: 121 ANLQAVINLRLARIQLQQNQADAALKTLDSVKGDG--WTAIVADIRGEALLSKGDKQGAR 178
Query: 183 TIFEELAKDNNSPF 196
+ + + + SP
Sbjct: 179 DAWSKGVESDASPA 192
>gi|148270125|ref|YP_001244585.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1]
gi|147735669|gb|ABQ47009.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila
RKU-1]
Length = 357
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F + N+ D A + E++L D L + + G+ + A E+ K+
Sbjct: 203 FMITEAYYEMNRKDLAVKALERLLEIDPDNIPALYQLSQ--LYRELGNEEKAREMEEKIM 260
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N P + A + ++ Y+E+++ L+K+ S+P++ A +L + +K
Sbjct: 261 NCKPKYPTELEPWARV-----MLKHGRYKEVAEELEKI-VESSPLNTLARLLLVVPYVKL 314
Query: 176 GKVQKAKTIFEELAK 190
G++ KA+ I +++ +
Sbjct: 315 GQIDKAREILDDIGQ 329
>gi|84387627|ref|ZP_00990644.1| hypothetical protein V12B01_09156 [Vibrio splendidus 12B01]
gi|84377472|gb|EAP94338.1| hypothetical protein V12B01_09156 [Vibrio splendidus 12B01]
Length = 204
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+++ + K K + ++ + L W Y D E + + E + +
Sbjct: 5 DSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAR-EVASEGYTSVISA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ +D I + + Y+ L+ M +A V GD A E + A
Sbjct: 64 LDAKGVDAQSDIQAFIDANKDAEYSVLAAMQLAKAQVQAGDLAAALEQL-EWAKSATKDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ T +AA I + ++ L+ +++ S E+ G +L+ G A +
Sbjct: 123 ALTPLLTYRAARIKAEQGEFDAALTDLEAMTDESWTGRVA--ELRGDISLRKGDTDAAYS 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYSEAQQAADASQTLQ 196
>gi|56476108|ref|YP_157697.1| putative transmembrane protein [Aromatoleum aromaticum EbN1]
gi|56312151|emb|CAI06796.1| putative transmembrane protein [Aromatoleum aromaticum EbN1]
Length = 215
Score = 51.9 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK-LYNPLSNMY 94
++ + F K+ + G + + AR + +I+ + + +Y ++ +
Sbjct: 37 SVGWQGFRWYQNKQASEAGALYFVVQQAAERGDAQKAREAAGQIIEKFSGTVYAEMAALL 96
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
A + + G+ KNA + +R A L+ AS+L+D ++ + LQ +
Sbjct: 97 SAGVQFSAGEGKNARAQLEWLVE-HGDDAVLRDIARLRLASVLLDEGAHADALARLQ--A 153
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
EP + ++ G GK+ +A++ ++
Sbjct: 154 EPDAALKGRFADLRGDVLAANGKLAEARSAYQ 185
>gi|110642678|ref|YP_670408.1| hypothetical protein ECP_2518 [Escherichia coli 536]
gi|110344270|gb|ABG70507.1| hypothetical protein YfgM (putative membrane protein) [Escherichia
coli 536]
Length = 206
Score = 51.9 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + + +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-QALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|326336387|ref|ZP_08202558.1| TPR-domain containing protein [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691561|gb|EGD33529.1| TPR-domain containing protein [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 995
Score = 51.9 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 65/175 (37%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL-SNMY 94
A W + F A + NK +A+ + EK L + K N + Y
Sbjct: 700 AQWAKSLGYVEVSDNELDNAAFEAAERQYIQNKKQEAKGALEKYLKEFPKGVNTAQARFY 759
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL- 153
+A + + A ++ KV + ++ ++I ++ +++ +L+++
Sbjct: 760 LAQLYFEANQKEKALPLYEKVLEEGR--NEYSEQVLVRLSNIYLEKEEIDKVIPLLKEIE 817
Query: 154 -SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ FA L + +A +++ + N+ + +++I+A
Sbjct: 818 KTSSVAQNLIFARSNLMKGFYRQKDYPQAIEYAKKILAEKNADNRLKNDARVIMA 872
Score = 42.7 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 7/143 (4%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ AL L + A + E+ L Y +N I +KG+TK+A + KV
Sbjct: 74 SSALRLGQAG----ANAQMEQYLRDYPSSPYATNANFEIGEYYFSKGNTKSAIAWYDKV- 128
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
A R Q L E ++ + S + A+ LG A
Sbjct: 129 QISSLSAAQREKFNFQYGYALFAHGDKET-AQRYLSQVKDSKEYGKKASYYLGYIAYDAD 187
Query: 177 KVQKAKTIFEELAKDNNSPFGIS 199
++A F+++ ++ +S
Sbjct: 188 DYKQANEFFQKVGQEKELNKNLS 210
>gi|22125254|ref|NP_668677.1| hypothetical protein y1355 [Yersinia pestis KIM 10]
gi|45442515|ref|NP_994054.1| hypothetical protein YP_2743 [Yersinia pestis biovar Microtus str.
91001]
gi|51597155|ref|YP_071346.1| hypothetical protein YPTB2839 [Yersinia pseudotuberculosis IP
32953]
gi|108808311|ref|YP_652227.1| hypothetical protein YPA_2317 [Yersinia pestis Antiqua]
gi|108811424|ref|YP_647191.1| hypothetical protein YPN_1261 [Yersinia pestis Nepal516]
gi|145599494|ref|YP_001163570.1| hypothetical protein YPDSF_2222 [Yersinia pestis Pestoides F]
gi|149365337|ref|ZP_01887372.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|153948923|ref|YP_001400169.1| hypothetical protein YpsIP31758_1188 [Yersinia pseudotuberculosis
IP 31758]
gi|162419351|ref|YP_001605022.1| hypothetical protein YpAngola_A0416 [Yersinia pestis Angola]
gi|165925919|ref|ZP_02221751.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937074|ref|ZP_02225639.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008103|ref|ZP_02229001.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212296|ref|ZP_02238331.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398834|ref|ZP_02304358.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421303|ref|ZP_02313056.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167423399|ref|ZP_02315152.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470076|ref|ZP_02334780.1| hypothetical protein YpesF_19823 [Yersinia pestis FV-1]
gi|186896250|ref|YP_001873362.1| membrane protein [Yersinia pseudotuberculosis PB1/+]
gi|218929937|ref|YP_002347812.1| hypothetical protein YPO2877 [Yersinia pestis CO92]
gi|229838456|ref|ZP_04458615.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229895158|ref|ZP_04510334.1| conserved protein [Yersinia pestis Pestoides A]
gi|229899023|ref|ZP_04514167.1| conserved protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229901681|ref|ZP_04516803.1| conserved protein [Yersinia pestis Nepal516]
gi|270489876|ref|ZP_06206950.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294504561|ref|YP_003568623.1| hypothetical protein YPZ3_2451 [Yersinia pestis Z176003]
gi|21958125|gb|AAM84928.1|AE013738_5 hypothetical protein y1355 [Yersinia pestis KIM 10]
gi|45437380|gb|AAS62931.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|51590437|emb|CAH22077.1| putative membrane protein [Yersinia pseudotuberculosis IP 32953]
gi|108775072|gb|ABG17591.1| membrane protein [Yersinia pestis Nepal516]
gi|108780224|gb|ABG14282.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115348548|emb|CAL21488.1| putative membrane protein [Yersinia pestis CO92]
gi|145211190|gb|ABP40597.1| membrane protein [Yersinia pestis Pestoides F]
gi|149291750|gb|EDM41824.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|152960418|gb|ABS47879.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|162352166|gb|ABX86114.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165914937|gb|EDR33549.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922123|gb|EDR39300.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992485|gb|EDR44786.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206227|gb|EDR50707.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960792|gb|EDR56813.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051338|gb|EDR62746.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057569|gb|EDR67315.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|186699276|gb|ACC89905.1| membrane protein [Yersinia pseudotuberculosis PB1/+]
gi|229681610|gb|EEO77704.1| conserved protein [Yersinia pestis Nepal516]
gi|229687968|gb|EEO80040.1| conserved protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229694822|gb|EEO84869.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701920|gb|EEO89943.1| conserved protein [Yersinia pestis Pestoides A]
gi|262362444|gb|ACY59165.1| hypothetical protein YPD4_2258 [Yersinia pestis D106004]
gi|262366549|gb|ACY63106.1| hypothetical protein YPD8_2431 [Yersinia pestis D182038]
gi|270338380|gb|EFA49157.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294355020|gb|ADE65361.1| hypothetical protein YPZ3_2451 [Yersinia pestis Z176003]
gi|320016013|gb|ADV99584.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 211
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 7/191 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFAQALELFNSNKL-DDARSSFEK 78
K +A ++L I +L W Y + + + AL ++ + D+ + EK
Sbjct: 23 KALAVGVVLGIGALVGWRYWQGNQNTAMTEASSAYQKVSTALSTNSAGNVSADSIALAEK 82
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+ + Y L + +A V + AA+ + + L+ A + +
Sbjct: 83 FVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQALGQTKDENLL-SLINLRLARVQL 141
Query: 139 DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+E K L + A ++ G + L G A+ + + A ++N+ +
Sbjct: 142 QLKKPDEALKTLDAVQGDG--WTAMAQDVRGDALLSKGDTAGARAAYSK-AIESNASQAL 198
Query: 199 STRSQMILANI 209
+M L N+
Sbjct: 199 QALLRMKLNNL 209
>gi|110806444|ref|YP_689964.1| hypothetical protein SFV_2560 [Shigella flexneri 5 str. 8401]
gi|110615992|gb|ABF04659.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|332754200|gb|EGJ84568.1| hypothetical protein SF434370_2727 [Shigella flexneri 4343-70]
gi|333001734|gb|EGK21300.1| hypothetical protein SFK218_3509 [Shigella flexneri K-218]
gi|333002308|gb|EGK21872.1| hypothetical protein SFK272_3305 [Shigella flexneri K-272]
gi|333016131|gb|EGK35463.1| hypothetical protein SFK227_3142 [Shigella flexneri K-227]
Length = 206
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGGILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|291618409|ref|YP_003521151.1| YfgM [Pantoea ananatis LMG 20103]
gi|291153439|gb|ADD78023.1| YfgM [Pantoea ananatis LMG 20103]
Length = 205
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 65/194 (33%), Gaps = 6/194 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
SN + + K +A +++ I +L W Y + + + +
Sbjct: 5 SNENEQVDALRRFFANNG-KALAVGVVIGIAALGGWRYWSSHQQDS-AKTISAEYQKVTR 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ K + + S+++ Y L+ + +A V AA + D
Sbjct: 63 AMQAGKP-ETLEAVNTFASENSNTYGALAALDLAKQYVDSNQLDKAATLLQNGLKDTK-D 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ L+ A I + + + K L + +I G + L G Q A+
Sbjct: 121 ANLQAVINLRLARIQLQQNQADAALKTLDSVKGDG--WTAIVADIRGEALLSKGDKQGAR 178
Query: 183 TIFEELAKDNNSPF 196
+ + + + SP
Sbjct: 179 DAWSKGVESDASPA 192
>gi|237654045|ref|YP_002890359.1| hypothetical protein Tmz1t_3388 [Thauera sp. MZ1T]
gi|237625292|gb|ACR01982.1| conserved hypothetical protein [Thauera sp. MZ1T]
Length = 214
Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y L ++ ++ + ++ + G + + N+ AR + +++
Sbjct: 22 YGNFVVTLAVVAALASVGWQAWNWYQSRNAGEAGALYYAVQQAVEKNEPQKAREAAGRLV 81
Query: 81 SQDNKLYNP-LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
S+ L + A++ GD NA L+ A D + A+R A L+ A++L+
Sbjct: 82 SEHGGSVGAQLGALLSAAMQFESGDLANA-RAQLEWAADKGSDPALRELARLRLAAVLLQ 140
Query: 140 TSSYEEISKILQ 151
+ LQ
Sbjct: 141 AGELDAALARLQ 152
>gi|15803036|ref|NP_289066.1| hypothetical protein Z3776 [Escherichia coli O157:H7 EDL933]
gi|12516904|gb|AAG57623.1|AE005480_10 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 206
Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAIKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDXARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|291613883|ref|YP_003524040.1| hypothetical protein Slit_1416 [Sideroxydans lithotrophicus ES-1]
gi|291583995|gb|ADE11653.1| Protein of unknown function DUF2133 [Sideroxydans lithotrophicus
ES-1]
Length = 212
Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 5/206 (2%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ + K KW+ L++ + A Y + + + +A+ ++
Sbjct: 7 QEQEQVEELKAWWKANGKWVVGALLVGSIGFAGTTYWRNHKASQAAEAA-KLYAEVVKQV 65
Query: 65 NSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
SN + + ++S+ + Y P + + A + D +A V
Sbjct: 66 ASNDAKRISDAADALVSRYGSSAYAPRAQLLAAQANLQARDAAHAKVELQWVIE-HADET 124
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ A L+ AS+L+D Y+E K L S +SA GK+ +A+
Sbjct: 125 GLQDTARLKLASVLLDEKKYDEALKQLDAAHPDSFTGLYSDLRGDVLSA--QGKIAEARV 182
Query: 184 IFEELAKDNNSPFGISTRSQMILANI 209
+++ ++ G Q+ L +
Sbjct: 183 AYQQAYDKMDAKSGYRNLIQLKLDGL 208
>gi|317490871|ref|ZP_07949307.1| hypothetical protein HMPREF0864_00069 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920418|gb|EFV41741.1| hypothetical protein HMPREF0864_00069 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 206
Score = 51.5 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 69/172 (40%), Gaps = 6/172 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +++ I +L W Y + + +++ QA E K D + EK +
Sbjct: 23 KALAIGVVIGIGALLGWRYWQNHQQ-AEMTGASQSYQQASEALTGGK-ADGVALAEKFIE 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L+ + +A V + D A E L A ++ L+ A + + +
Sbjct: 81 KNANNYGVLAALQLAQHEVDQKDFAKA-EHQLAWAQGQAKDENLKSLIDLRLARVQLQEN 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDN 192
++ K L + A ++ G +K G V+ A+ + + LA D
Sbjct: 140 KLDDALKTLDLVKATG--WVAMAQDVRGDVLVKKGDVKGAREAYSKGLASDA 189
>gi|293410927|ref|ZP_06654503.1| UPF0070 protein yfgM [Escherichia coli B354]
gi|291471395|gb|EFF13879.1| UPF0070 protein yfgM [Escherichia coli B354]
Length = 206
Score = 51.5 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKLADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|331684161|ref|ZP_08384757.1| putative inner membrane protein [Escherichia coli H299]
gi|331079113|gb|EGI50315.1| putative inner membrane protein [Escherichia coli H299]
Length = 206
Score = 51.5 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 74/193 (38%), Gaps = 6/193 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K D ++ EK +++ Y L+++ +A V K + + AA + D
Sbjct: 64 VSEGKPDSIPAA-EKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTS-DE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
++ L+ A + V + K L + + ++ G + L G Q A++
Sbjct: 122 NLKAVINLRLARVQVQLKQADAALKTLDAIKDEG--WAAIVADLRGEALLSKGDKQGARS 179
Query: 184 IFEELAKDNNSPF 196
+E K + +P
Sbjct: 180 AWEAGVKSDVTPA 192
>gi|256829285|ref|YP_003158013.1| hypothetical protein Dbac_1504 [Desulfomicrobium baculatum DSM
4028]
gi|256578461|gb|ACU89597.1| conserved hypothetical protein [Desulfomicrobium baculatum DSM
4028]
Length = 215
Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 9/168 (5%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K I + +++++A++ + +++ V E + + + E +
Sbjct: 34 KPIGITVGGIVMAVAVYSGVTTYQESQREKAVSE-LGVIMTMADQ---TARIEKLEAFAA 89
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
K + + +A I + + D + AA + V +R A L A L+
Sbjct: 90 SGPKELRSAAQLELARIFMDQNDYEKAAGAWRSVGQSSD----IRVIAGLGEAKALILKG 145
Query: 142 SYEEISKILQKLSEPSNPMHQFANEI-LGISALKFGKVQKAKTIFEEL 188
Y + +IL L + ++ A L +A K G++ A + +E L
Sbjct: 146 EYAKAVEILSGLKKDASQEFLPAISANLAFAAEKAGQIDLAISEYEAL 193
>gi|86145596|ref|ZP_01063926.1| hypothetical protein MED222_01542 [Vibrio sp. MED222]
gi|85836567|gb|EAQ54693.1| hypothetical protein MED222_01542 [Vibrio sp. MED222]
Length = 204
Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+++ + K K + ++ + L W Y D E + E++ A+
Sbjct: 5 DSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAR-EAASESYTSAISA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ +D I + + Y+ L+ M +A V GD A E + A
Sbjct: 64 LDAKGVDAQSDIQAFIDANKDAEYSVLAAMQLAKAQVQAGDLTAALEQL-EWAKSATKDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ T + A I + ++ L+ +++ S E+ G +L+ G A +
Sbjct: 123 ALAPLLTYRVARIKAEQGEFDAALTDLEAMTDES--WKDRVAELRGDISLRKGDTDAAYS 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYSEAQQAADASQTLQ 196
>gi|239815180|ref|YP_002944090.1| hypothetical protein Vapar_2189 [Variovorax paradoxus S110]
gi|239801757|gb|ACS18824.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 230
Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 2/133 (1%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y + ++L++ + + + K + + S ++ + +
Sbjct: 23 YGTLITWVVLLVAGAFVAWNGWQYFQRNKAAQAAALYDEVERSTQSGDVERIQRVLGDMK 82
Query: 81 SQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ Y + + A L KG+ + + VA + A L+ A+ L+D
Sbjct: 83 ERFAGTAYAQQAGLLAAKALYEKGNAEASRAALGWVA-QSAVDPGYKAVAKLRLAAELLD 141
Query: 140 TSSYEEISKILQK 152
+ SY+E K L
Sbjct: 142 SKSYDEALKQLSG 154
>gi|21242763|ref|NP_642345.1| hypothetical protein XAC2019 [Xanthomonas axonopodis pv. citri str.
306]
gi|21108243|gb|AAM36881.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 212
Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 50/149 (33%), Gaps = 10/149 (6%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + + ++ + LD A + +Y L+ + +A
Sbjct: 41 WQWWQTRTNTALVEANGRYEAVVKSIQAKDLDKAAKDIVALDDGKGGIYAELAALRLAKA 100
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V G A + D A ++ + A +L ++ +E K+L +
Sbjct: 101 QVDAGKNDEAIKTL----RDVPAEGELKQIVQQRLARLLTESGKPDEAIKLLADAQD--- 153
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
+ EI + + GK +A+ ++ +
Sbjct: 154 ---HASLEIRADALVVQGKPDEARALYAK 179
>gi|15644443|ref|NP_229495.1| hypothetical protein TM1695 [Thermotoga maritima MSB8]
gi|4982272|gb|AAD36762.1|AE001810_1 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 357
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F + N+ D A + E++L D L + + G+ + A E+ K+
Sbjct: 203 FMITEAYYEMNRKDLAVKTLERLLEIDPDNIPALYQLSQ--LYRELGNEEKAREMEEKIM 260
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N P + A + ++ Y+E+++ L+K+ S+P++ A +L + +K
Sbjct: 261 NCKPKYPTELEPWARV-----MLKHGRYKEVAEELEKI-VESSPLNTLARLLLVVPYVKL 314
Query: 176 GKVQKAKTIFEELAKDN 192
G++ KA+ I +++ + N
Sbjct: 315 GQIDKAREILDDIGQSN 331
>gi|29654550|ref|NP_820242.1| hypothetical protein CBU_1247 [Coxiella burnetii RSA 493]
gi|153208853|ref|ZP_01947077.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706028|ref|YP_001424684.1| hypothetical protein CBUD_1331 [Coxiella burnetii Dugway 5J108-111]
gi|165921441|ref|ZP_02219629.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
gi|212218661|ref|YP_002305448.1| hypothetical protein CbuK_1107 [Coxiella burnetii CbuK_Q154]
gi|29541817|gb|AAO90756.1| hypothetical protein CBU_1247 [Coxiella burnetii RSA 493]
gi|120575704|gb|EAX32328.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
gi|154355314|gb|ABS76776.1| hypothetical protein CBUD_1331 [Coxiella burnetii Dugway 5J108-111]
gi|165916756|gb|EDR35360.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
gi|212012923|gb|ACJ20303.1| hypothetical protein CbuK_1107 [Coxiella burnetii CbuK_Q154]
Length = 206
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 5/186 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E +D + K + + IA +++ +L W Y E K + Q
Sbjct: 3 ELLSDQEQIEMIKKWWRDYGRAIALAIVIGLLIGFGWRYWHRHQLE-KTERASALYMQLQ 61
Query: 62 ELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L + N D + ++++ Y +++ A V + A + V +
Sbjct: 62 ILASQNAWDKTKPLTDRLIKDYGKTPYAAMASFLNAKRAVEQNHLPLALDQLQWVMK-NA 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
++ A L+A+ IL+ + + +LQ + +EI G G +
Sbjct: 121 IVSDLKQLARLRASRILLAENRPKAALNLLQ--TVDDQAYQPLVDEIKGDIYAAMGNRES 178
Query: 181 AKTIFE 186
AK +E
Sbjct: 179 AKQFYE 184
>gi|226954469|ref|ZP_03824933.1| tetratricopeptide TPR_4 [Acinetobacter sp. ATCC 27244]
gi|294651485|ref|ZP_06728798.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|226834818|gb|EEH67201.1| tetratricopeptide TPR_4 [Acinetobacter sp. ATCC 27244]
gi|292822635|gb|EFF81525.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 232
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 76/191 (39%), Gaps = 8/191 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGEN---F 57
M ++D K K I+ +LI +I + W Y + + +N +
Sbjct: 1 MSLSDDEQLDSLKSFAKKYGSAIISGILIALI-AFFGWEYWQKKTQAEAQNQTAKVQKLI 59
Query: 58 AQALELF-NSNKLDDARSSFEKILSQD-NKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+A L N + + +KI+ +D N ++ + +A + K D A + KV
Sbjct: 60 DEAQALAGQPNAFETISEAADKIVKEDANSVHAIQVQLLLAKLAYDKDDYAAAEKALKKV 119
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N + + L+ A + Y+E K L K++EP+ A+E+ G +
Sbjct: 120 ENSTIKDTGLVQIVKLRLADAQLAQKKYDEALKTLDKVTEPT--FKATADELRGDIYVAK 177
Query: 176 GKVQKAKTIFE 186
+ + A+ ++
Sbjct: 178 QETEAARKAYQ 188
>gi|58582154|ref|YP_201170.1| hypothetical protein XOO2531 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84624046|ref|YP_451418.1| hypothetical protein XOO_2389 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188576713|ref|YP_001913642.1| hypothetical protein PXO_01056 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188576904|ref|YP_001913833.1| hypothetical protein PXO_06110 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58426748|gb|AAW75785.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84367986|dbj|BAE69144.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521165|gb|ACD59110.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521356|gb|ACD59301.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 212
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 10/149 (6%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + + + ++ + LD A + +Y L+ + +A
Sbjct: 41 WQWWQKYTNTELVEANTRYEAVVKSIQAKNLDKAAKDIMALDDGKGGIYAELAALRLAKA 100
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V G A + V + V+ + A +L ++ +E K+L +
Sbjct: 101 QVDVGKNAEAIKTLRDVPAEGELKQIVQQ----RLARVLTESGKPDEAIKLLADAQD--- 153
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
+ EI + + GK +A+ ++ +
Sbjct: 154 ---HASLEIRADALVVQGKPDEARALYAK 179
>gi|238788168|ref|ZP_04631963.1| hypothetical protein yfred0001_36160 [Yersinia frederiksenii ATCC
33641]
gi|238723755|gb|EEQ15400.1| hypothetical protein yfred0001_36160 [Yersinia frederiksenii ATCC
33641]
Length = 206
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + ++N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQN-SAMTEASSAYQQASDALSAN-SADGVALAEKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+N Y L+ + +A V + + AA+ + + L+ A + +
Sbjct: 81 GNNNNYGVLAGLELAHHFVEQNEFDKAAQQLTQALGQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+E K L + A ++ G + L G A+ + + ++N+ +
Sbjct: 140 KPDEALKTLDAVQGDG--WTAMAQDVRGDALLSKGDTAGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|325524776|gb|EGD02750.1| hypothetical protein B1M_19904 [Burkholderia sp. TJI49]
Length = 209
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 10/202 (4%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + + Y ++ + A +L A GDT A + L+ A D
Sbjct: 63 AAANDKATMARAAADMEDKYGSTAYAQMTALAAAKVLYAAGDTAGA-KTQLQWAADHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGLVADRRGDLLAAQGKTDDAR 179
Query: 183 TIF----EELAKDNNSPFGIST 200
+ + L+KD+ S +
Sbjct: 180 AAYKLALDSLSKDDQSARQLVQ 201
>gi|212634301|ref|YP_002310826.1| putative membrane-associated protein with TPR-like domain
[Shewanella piezotolerans WP3]
gi|212555785|gb|ACJ28239.1| putative membrane-associated protein with TPR-like domain
[Shewanella piezotolerans WP3]
Length = 206
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 10/194 (5%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
S + K + ++ + L W Y D + E+F
Sbjct: 5 STEEQQVDAIKQFWKDYGSSVVIG-AVVGLGGLFGWNYYSDY-QLAQAEAASESFQA--- 59
Query: 63 LFNSNKLDDARSSFEKILSQDNK--LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L + N D A S + ++++ Y L + +A V GD + A V +
Sbjct: 60 LSSQNTADAAMLSAAETFAKEHGQQGYQSLLELMVAKSAVETGDLEKAEATLKNVIAVN- 118
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A ++ AT++ A + + + L+++ + ++ + E+ G ++ G+ K
Sbjct: 119 ADSSIVLIATMRLARVQAEQGQFATAITTLEQIKDVASAAQRD--ELKGDFLVRQGETDK 176
Query: 181 AKTIFEELAKDNNS 194
A+ ++ ++ +
Sbjct: 177 ARLAYQAAVENGGT 190
>gi|294625015|ref|ZP_06703665.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600690|gb|EFF44777.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 10/149 (6%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + + ++ + LD A + +Y L+ + +A
Sbjct: 41 WQWWQTRTNTALVEANGRYEAVVKSIQAKDLDKAAKDIVALDDGKGGIYAELAALRLAKA 100
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V G A + D A ++ + A +L ++ +E K+L + +
Sbjct: 101 QVDAGKNAEAIKTL----RDVPAEGELKQIVQQRLARLLTESGKPDEAIKLLAEAQD--- 153
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
+ EI + + GK +A+ ++ +
Sbjct: 154 ---HASLEIRADALVVQGKPDEARALYTK 179
>gi|157144553|ref|YP_001451872.1| hypothetical protein CKO_00273 [Citrobacter koseri ATCC BAA-895]
gi|157081758|gb|ABV11436.1| hypothetical protein CKO_00273 [Citrobacter koseri ATCC BAA-895]
Length = 206
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 70/175 (40%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E ++ + A+ ++ K D + S+ EK +
Sbjct: 23 KALAVGVILGVGALLGWRYWTSHQTESARS-ASLAYQNAVTAVSAGKPD-SISAAEKFAT 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L++M +A V + + + AA + ++ L+ A + V
Sbjct: 81 ENKNTYGALASMELAQQFVDQNELEKAAAQLQQGLAATS-DENLKAVINLRLARVQVQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G Q A++ +E K + SP
Sbjct: 140 QADTALKTLD--TVKGEGWAAIVADLRGEALLSKGDKQGARSAWEAGVKSDASPA 192
>gi|294666612|ref|ZP_06731851.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603632|gb|EFF47044.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 10/149 (6%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + + ++ + LD A + +Y L+ + +A
Sbjct: 41 WQWWQTRTNTALVEANGRYEAVVKSIQAKDLDKAAKDIVALDDGKGGIYAELAALRLAKA 100
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V G A + V + V+ + A +L ++ +E K+L + +
Sbjct: 101 QVDAGKNAEAIKTLRDVPAEGELKQIVQQ----RLARLLTESGKPDEAIKLLAEAQD--- 153
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
+ EI + + GK +A+ ++ +
Sbjct: 154 ---HASLEIRADALVVQGKPDEARALYTK 179
>gi|78047626|ref|YP_363801.1| hypothetical protein XCV2070 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036056|emb|CAJ23747.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 50/147 (34%), Gaps = 10/147 (6%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + + ++ + LD A + +Y L+ + +A
Sbjct: 41 WQWWQTRTNTALVEANGRYEAVVKSIQAKDLDKAAKDIVALDDGKGGIYAELAALRLAKA 100
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V G A + + D A ++ + A +L ++ +E K+L +
Sbjct: 101 QVDAGKNAEAIK----ILRDVPAEGELKQIVQQRLARVLTESGKPDEAIKLLADAQD--- 153
Query: 159 PMHQFANEILGISALKFGKVQKAKTIF 185
+ EI + + GK +A+ ++
Sbjct: 154 ---HASLEIRADALVAQGKPDEARALY 177
>gi|312884306|ref|ZP_07744015.1| hypothetical protein VIBC2010_11051 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368079|gb|EFP95622.1| hypothetical protein VIBC2010_11051 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 204
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 62/195 (31%), Gaps = 5/195 (2%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ + K + K I ++ + L W D + +++ +E
Sbjct: 7 EEQQIERIKELWNEYG-KVIVASAVIGLGGLFGWNQYQDSVIATQ-EATSDSYVAVIEEL 64
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ A I Y+ L+ + +A + V G+ A + A A
Sbjct: 65 ADKGVSAANDVQTFIDDNQKTQYSVLAALQLAKLQVEAGNLDEALAQL-EWAKSATQDTA 123
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ + A + ++ +Y+ L E+ G L+ G + A T
Sbjct: 124 ISAVILHRLARLKLEQGNYDAALAELNL--VKDQGWAGRVAELKGDIFLRQGNTEAAYTA 181
Query: 185 FEELAKDNNSPFGIS 199
+ E +D ++ +
Sbjct: 182 YTEAQQDGDASQTLQ 196
>gi|91203185|emb|CAJ72824.1| hypothetical protein kustd2079 [Candidatus Kuenenia
stuttgartiensis]
Length = 319
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 30 LMILSLAIWFYLFDGSHEK-----KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
++L+ A + L S K + N+ E + Q +E ++A F K L+ D
Sbjct: 17 AILLAGAFQYSLVYASSVKDQMPYRSNMAHEQYLQGVEYAKYGLHNEAIELFRKSLATDP 76
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAATLQAASILVDTSSY 143
+ ++ + K A E+F KV + P A T+ D Y
Sbjct: 77 DNIDTCISLGE--VYADKRMDSEAIELFQKVLKINPNQPQAYFKIGTV-----YFDMEEY 129
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNNS 194
E + L+K + NP ++ A +LGIS K GK +A + ++ + D N
Sbjct: 130 EPAIEYLKK-TIEMNPDYKVAYSLLGISYAKSGKYDEAVKVLKKRIELDPNL 180
>gi|152979677|ref|YP_001345306.1| hypothetical protein Asuc_2025 [Actinobacillus succinogenes 130Z]
gi|150841400|gb|ABR75371.1| conserved hypothetical protein [Actinobacillus succinogenes 130Z]
Length = 202
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 5/169 (2%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
+ ++ L+ I + + K + + QA+ + K +F + + +
Sbjct: 26 IAIFVIALAGVIGWRYWQDYQTVKAQEMSMAYEQAISHQDGAKKQTQIDAF--VQANEKT 83
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
Y L+ + A V K D +AAE+ + A P + A ++ A + ++
Sbjct: 84 GYAALALLEKAKDAVNKQDFASAAEVLKQAAFHAPEP-VLAATANMRLAEVQFQQKDFDG 142
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
L ++ E + L G AK FEE+ K+ +
Sbjct: 143 ALATLAQVKETG--FANPKTLLTAEIQLAKGDKASAKAGFEEVLKNATA 189
>gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2]
gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2]
Length = 357
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F N+ D A + E++L D L + + G + A E+ K+
Sbjct: 203 FMITEAYHEMNRKDLAVKALERLLEIDPDNIPALYQLSQ--LYRELGSEEKAREMEEKIM 260
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N P + A + ++ Y+E+ + L+K+ S+P++ A +L + +K
Sbjct: 261 NCKPKYPTELEPWARV-----MLKHGRYKEVVEELEKI-VESSPLNTLARLLLVVPYVKL 314
Query: 176 GKVQKAKTIFEELAKDN 192
G++ KA+ I +++ + N
Sbjct: 315 GQIDKAREILDDIGQSN 331
>gi|330817165|ref|YP_004360870.1| hypothetical protein bgla_1g22870 [Burkholderia gladioli BSR3]
gi|327369558|gb|AEA60914.1| hypothetical protein bgla_1g22870 [Burkholderia gladioli BSR3]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 73/202 (36%), Gaps = 13/202 (6%)
Query: 4 NNDANSYKGKCKMGKC--CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFAQ 59
+ + K + WI +++++ + W + + G E Q
Sbjct: 5 DEQESIESVKAWWARWGNLTTWILTAVLVVVAAWNGWNFW---QRHQASEASGLYEAVQQ 61
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A+ + K+ A + E Y ++ + A L GD+ A + L+ A D
Sbjct: 62 AVTSGDKAKIARAAADMED--KYGGTAYAQMTALAAAKGLYMAGDSAGA-KTQLQWAIDH 118
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+ A L+ AS+L+D SY+ +L S+ ++A GK
Sbjct: 119 AKDDEYKQIAKLRLASLLLDEKSYDAGLALLNGTSDEGFKGLVADRRGDLLAA--QGKRD 176
Query: 180 KAKTIFEELAKDNNSPFGISTR 201
A++ ++ LA D+ R
Sbjct: 177 DARSAYQ-LALDSLPKEDQRAR 197
>gi|56461132|ref|YP_156413.1| hypothetical protein IL2032 [Idiomarina loihiensis L2TR]
gi|56180142|gb|AAV82864.1| Uncharacterized conserved membrane protein [Idiomarina loihiensis
L2TR]
Length = 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 5/194 (2%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M++ + + K + +A +++ L + +D + + N+ Q
Sbjct: 1 MDNTEEQQVERLKEFWKEHGKGIVAG--VVIGFGLFYGWRYYDQHTLETQQRASANYEQL 58
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ + + E + +Y L + +A V + D A V D
Sbjct: 59 TAELSEGSENAVLEAQEFVSENPKNVYAQLVALQLAQHSVERADLATAVTALQSVV-DSA 117
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+ A+++ A +L+ + +++K FA E+ G + G ++
Sbjct: 118 EDENMSALASIRLARVLIAQEQLDAALSLVKKPLPE--AYAGFAAELEGDILAEQGNTEE 175
Query: 181 AKTIFEELAKDNNS 194
A+ +E + S
Sbjct: 176 ARAAYERALQAGES 189
>gi|220918792|ref|YP_002494096.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956646|gb|ACL67030.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 426
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A+ EL D AR++ E+ L K L+ + A +G +AA + ++
Sbjct: 19 LARGTELLAQGDADRARAALERALDLGPKDAKVLALLGQACY--RQGQFDDAAIAWQRLV 76
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+++ A A + + +EE + L+ ++ NP H+ A LG++ L+ G
Sbjct: 77 DENPVEPA----ARVNLGLAFLKAKHHEEARRQLE-IALDLNPDHRKAMGYLGLALLESG 131
Query: 177 KVQKAKTIFEELAKD 191
A+ F + D
Sbjct: 132 DPAGAREWFRKAGSD 146
>gi|260062000|ref|YP_003195080.1| hypothetical protein RB2501_10422 [Robiginitalea biformata
HTCC2501]
gi|88783562|gb|EAR14733.1| hypothetical protein RB2501_10422 [Robiginitalea biformata
HTCC2501]
Length = 1006
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMY 94
A W D + +F A + A + EK + N +
Sbjct: 703 AAWVRGLDFVEVTDSELEAASFEAAEKQLVEGNDAAAARALEKYLEQFPNGANRVAAYFN 762
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL- 153
+ I A G A F VA+ A + A + ILV Y L++L
Sbjct: 763 LGQIAYADGQADKALAHFEVVADAGRGERAEQ--ALTRVCEILVSRGDYAAAMPYLERLE 820
Query: 154 -SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ FA L + + E++ + I + +++++A
Sbjct: 821 ATADIPQNRTFAQSNLMKGYFEKQAYDRTLAYAEKVLASPSLDDRIRSDARLMIA 875
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 53/158 (33%), Gaps = 4/158 (2%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+ A + N V F + + D A + FE + +
Sbjct: 738 AAARALEKYLEQFPNGANRVAAYFNLGQIAYADGQADKALAHFEVVADAGRGERAEQALT 797
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK- 152
+ ILV++GD A ++ P R A + +Y+ +K
Sbjct: 798 RVCEILVSRGDYAAAMPYLERLEATADIPQN-RTFAQSNLMKGYFEKQAYDRTLAYAEKV 856
Query: 153 LSEP--SNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
L+ P + + A ++ SA G +KA+ + E+
Sbjct: 857 LASPSLDDRIRSDARLMIARSAWATGNTEKARQAYAEV 894
Score = 38.8 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 34/189 (17%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
W+ D S ++ +F LF+S K ++A +++ +++ Y + Y+
Sbjct: 124 WYGKVDQSSLSRREKERFDFHMGYSLFSSRKPEEAERYLQRV--SNSQEYGSQAKYYLGY 181
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVR-------------YAATLQAASIL------- 137
I + D + A E F ++ + ++ + A QA S L
Sbjct: 182 IAYQQDDYEAANERFDQITDQEVLEEKLSYYQADMNFKLGNFEQAIEQAVSQLPKSDRRE 241
Query: 138 ------------VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
+ Y E L+K + +LG + K G + A F
Sbjct: 242 VSELNKIIGESYFNLGRYAEAIPYLEKYQGKRGRWNNTDYYLLGYAHYKQGDYENAIRQF 301
Query: 186 EELAKDNNS 194
++ ++S
Sbjct: 302 NKIVGGDDS 310
>gi|239997027|ref|ZP_04717551.1| putative membrane-associated protein with TPR-like domain
[Alteromonas macleodii ATCC 27126]
Length = 206
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 7/180 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+ + K + I + L + + + + K + A+E
Sbjct: 5 ATEEQQVEAIKRFWKEHGTAIIVGAA--LGLGGLWGWRAYSEAQIETKEAASVAYQNAVE 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
F + D +F I + Y ++++ A V GD AA V
Sbjct: 63 TFGTEGSDAKVKAF--IEENKDSGYASIASLLAAKQAVDAGDLDAAASHLNSVV-TFAEN 119
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ A+L+ + + ++ + + L ++ +E+ G K GK A+
Sbjct: 120 DELKVLASLRLSRVQIEMNQLDAALSTLSNVTND--AFAAEVSELKGDVYQKQGKFDDAR 177
>gi|332162634|ref|YP_004299211.1| hypothetical protein YE105_C3014 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666864|gb|ADZ43508.1| hypothetical protein YE105_C3014 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 206
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + ++N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQNTVLTEASS-AYQQASDALSAN-SADGVAVAEKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V + + AA+ + + + L+ A + +
Sbjct: 81 SNKNNYGVLAGLELAHHFVEQNEFDKAAQQLTQALSQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+E K L + A ++ G + L G A+ + + ++N+ +
Sbjct: 140 KPDEALKTLDAVQGDG--WTAMAQDVRGDALLSKGDTAGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|71908596|ref|YP_286183.1| putative transmembrane protein [Dechloromonas aromatica RCB]
gi|71848217|gb|AAZ47713.1| putative transmembrane protein [Dechloromonas aromatica RCB]
Length = 212
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 54/156 (34%), Gaps = 5/156 (3%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E ++ K KM + L L ++ W + GS K + + QA
Sbjct: 6 LEEQEQIDTLKTWWKMYGNLVTNVIVALSLAVIGWQGWN-WYQGSQATKASAIYGVLEQA 64
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ ++ K+ A Y L M A GD K A VA +
Sbjct: 65 AAVGDAQKVKAAAGELA--EKFGGTNYAALGAMLAAKQSFEAGDLKTAKTQLSWVAENGK 122
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
V+ A L+ ++ +D +Y+E K L P
Sbjct: 123 D--EVKDLARLRLVAVQLDDKAYDEAMKQLDAAHAP 156
>gi|318606738|emb|CBY28236.1| mlr7403 protein [Yersinia enterocolitica subsp. palearctica Y11]
Length = 206
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + ++N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQNTVLTEASS-AYQQASDALSAN-SADGVAVAEKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V + + AA + + + L+ A + +
Sbjct: 81 SNKNNYGVLAGLELAHHFVEQNEFDKAARQLTQALSQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+E K L + A ++ G + L G A+ + + ++N+ +
Sbjct: 140 KPDEALKTLDAVQGDG--WTAMAQDVRGDALLSKGDTAGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|291085039|ref|ZP_06570911.1| putative inner membrane protein [Citrobacter youngae ATCC 29220]
gi|291071732|gb|EFE09841.1| putative inner membrane protein [Citrobacter youngae ATCC 29220]
Length = 221
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 69/175 (39%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E ++ + + ++ K D ++ EK +
Sbjct: 38 KALAVGVILGVGALVGWRYWTSHQTESARS-ASLAYQNTVTAVSAGKPDSIPAA-EKFAA 95
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L+++ +A V + + + AA + + ++ L+ A + V
Sbjct: 96 ENKNTYGALASLELAQQFVDQNELEKAASQLQQ-GLSATSDENLKAVINLRLARVQVQLK 154
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G Q A++ +E K + SP
Sbjct: 155 QADTALKTLDAIKGEG--WTAIVADLRGEALLSKGDKQGARSAWEAGVKSDASPA 207
>gi|123441420|ref|YP_001005407.1| hypothetical protein YE1075 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088381|emb|CAL11172.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 206
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + ++N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQNTVLTEASS-AYQQASDALSAN-SADGVAVAEKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V + + AA+ + + L+ A + +
Sbjct: 81 SNKNNYGVLAGLELAHHFVEQNEFDKAAQQLTQALGQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+E K L + A ++ G + L G A+ + + ++N+ +
Sbjct: 140 KPDEALKTLDAVQGDG--WTAMAQDVRGDALLSKGDTAGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|163757156|ref|ZP_02164258.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1]
gi|161322884|gb|EDP94231.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1]
Length = 1012
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 78/186 (41%), Gaps = 6/186 (3%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL-SNMY 94
A W D + + A + F N D A FEK ++Q N + +N Y
Sbjct: 705 ANWVKDLDFVDVTNVELDKATYESAEKQFIQNNTDKAIEGFEKYINQFPNGLNAVKANFY 764
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKL 153
+A +KG+T+ + V ++ + + A L + D + + K L++
Sbjct: 765 LAQSYFSKGETQKTIPHYEYVLQNEGSEYTEQALARLSQVFLETDNYTKAIPVLKRLEES 824
Query: 154 SE-PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA-NIIA 211
++ P N FA L ++ + +A + E++ ++ I + + +I+A + IA
Sbjct: 825 ADFPQNI--TFAQSNLMKASYELDNYTQAVSYAEKVLANDKVDNRIKSDAHVIIARSAIA 882
Query: 212 SDQRNK 217
++ +K
Sbjct: 883 TNDEDK 888
Score = 35.0 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 2/106 (1%)
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
+ + +A G A + + K + D + R + + Y++
Sbjct: 103 RNSAYIDVADYYFENGKYARALKWYDK-SGDKGLTNSQREDYNFKKGYAYFTSKKYDQAK 161
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
QKL S A G A + K +A F+ +++++
Sbjct: 162 TYFQKLL-DSQKYGSQAKYYTGYIAYQEDKYDEANEYFDGVSEEDE 206
>gi|269140143|ref|YP_003296844.1| hypothetical protein ETAE_2800 [Edwardsiella tarda EIB202]
gi|267985804|gb|ACY85633.1| hypothetical protein ETAE_2800 [Edwardsiella tarda EIB202]
gi|304559977|gb|ADM42641.1| putative membrane protein [Edwardsiella tarda FL6-60]
Length = 206
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 5/154 (3%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+L W Y +++ A E + K D + E + ++ Y L+ +
Sbjct: 35 ALLGWRYWVGHQQANMAQ-ASQSYQLASEALSGGKQD-GVALSEAFIKENGNNYGVLAAL 92
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+A V K D A A ++ + L+ A + + + + K L +
Sbjct: 93 QLAQYEVEKSDFAKAQTQL-VWAAGQAKDENLKSLSDLRLARVQLQENQLDAALKTLDGV 151
Query: 154 SEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ A ++ G LK G + A+ + +
Sbjct: 152 TAKG--WQPLAQDVRGDVLLKKGDAKGAREAYSK 183
>gi|88858478|ref|ZP_01133120.1| putative membrane-associated protein with TPR-like domain
[Pseudoalteromonas tunicata D2]
gi|88820095|gb|EAR29908.1| putative membrane-associated protein with TPR-like domain
[Pseudoalteromonas tunicata D2]
Length = 211
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 70/195 (35%), Gaps = 6/195 (3%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKK---KNIVGENFAQALELF 64
++ + + + K ++ L++ ++ Y + ++ + + + + ++
Sbjct: 5 STEEQQAEAIKRFFRENGTALVIGVVLGLGGLYGWKAYNQNQVESAEAASDAYEKLVKAD 64
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
NK + + E I + + Y L+ A V K D A E + ++ P
Sbjct: 65 AQNKTNALAGADEFIKNNKDSSYAVLAAFVAAKEAVEKADFNLAKEKLTWITQNNKNPE- 123
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ A + A I ++ +Y+ K+L E+ G G + +A++
Sbjct: 124 LNAIANSRIARIELELKNYDAALKVLSVTMPE--AFKASVAELKGDVYRAQGDLGQARSA 181
Query: 185 FEELAKDNNSPFGIS 199
++ A +
Sbjct: 182 YQAAADAGGLTNNAT 196
>gi|237732492|ref|ZP_04562973.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226908031|gb|EEH93949.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 206
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 68/175 (38%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E ++ + + ++ K D ++ EK +
Sbjct: 23 KALAVGIILGVGALVGWRYWTSHQTESARS-ASLAYQNTVTAVSAGKPDSIPAA-EKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L+++ +A V + + + AA + ++ L+ A + V
Sbjct: 81 ENKNTYGALASLELAQQFVDQNELEKAASQLQQGLAATS-DENLKAVINLRLARVQVQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G Q A++ +E K + SP
Sbjct: 140 QADTALKTLDTIKGEG--WTAIVADLRGEALLSKGDKQGARSAWEAGVKSDASPA 192
>gi|330812018|ref|YP_004356480.1| thioredoxin [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327380126|gb|AEA71476.1| putative thioredoxin [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 290
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 2/124 (1%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ F QA LF+ + DA + +L +DN L + A L +G+ A +
Sbjct: 119 AAADPFEQAQALFDDGRFADAEALLTVLLGEDNTNAKAL--ILYARCLTERGELDEAQTV 176
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
V +D+ A +Q + ++ L K + ++Q A + L
Sbjct: 177 LDAVKSDEHKAALAGAKAQIQFLGLAKHLPDAADLKARLAKDPQDDEAVYQLAIQQLARQ 236
Query: 172 ALKF 175
+
Sbjct: 237 QYEA 240
>gi|283786129|ref|YP_003365994.1| hypothetical protein ROD_24561 [Citrobacter rodentium ICC168]
gi|282949583|emb|CBG89201.1| putative membrane protein [Citrobacter rodentium ICC168]
Length = 206
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 6/196 (3%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M N + K + K +A +IL + +L W Y E ++ ++
Sbjct: 3 MYENENDQVEAIKRFFAENG-KALAVGVILGVGALIGWRYWTSHQTESARS-ASLSYQNV 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ N+ K + ++ EK +++ Y L++M +A V + A +
Sbjct: 61 VSSLNAGK-AENLTTAEKFAAENKNTYGALASMELAQQFVERSQLDKAVAQLQQGLAATS 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
++ +L+ A + V + K L + ++ G + L G Q
Sbjct: 120 -DENLKAVISLRLARVQVQLKQADTALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQG 176
Query: 181 AKTIFEELAKDNNSPF 196
A++ +E SP
Sbjct: 177 ARSAWEAGVNSKASPA 192
>gi|251791828|ref|YP_003006548.1| protein 1057 [Aggregatibacter aphrophilus NJ8700]
gi|247533215|gb|ACS96461.1| protein 1057 [Aggregatibacter aphrophilus NJ8700]
Length = 204
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 7/187 (3%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + ++ K YK+I ++ + W Y +K + + QA
Sbjct: 5 IEEEQELSAIKA---WWNENYKFIIVCFVIAFGGVFGWNYWQSH-QIQKIHSASAEYEQA 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L + + A + I + + Y L+ + A I V D A + +
Sbjct: 61 LFNYAKDPKAQAEQFSQFIKNHEKTSYAVLALLDKAKIAVENNDFTLAEDALKQAMAQST 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+ L+ AS+ ++ L+ N + G L G +
Sbjct: 121 DD-ILSSITALRLASVQFQLGQFDPALDSLKL--VKEQAWSGAKNILAGDIQLAKGDKEA 177
Query: 181 AKTIFEE 187
AK +++
Sbjct: 178 AKASYQQ 184
>gi|78066580|ref|YP_369349.1| hypothetical protein Bcep18194_A5111 [Burkholderia sp. 383]
gi|77967325|gb|ABB08705.1| conserved hypothetical protein [Burkholderia sp. 383]
Length = 209
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 75/199 (37%), Gaps = 7/199 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + + Y ++ + A L A GD+ A + L+ A D
Sbjct: 63 AAANDKATMARAAADMEDKFGSTPYAQMAALSAAKTLYAAGDSAGA-KAQLQWAVDHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGLVADRRGDLLAAQGKTDDAR 179
Query: 183 TIFEELAKDNNSPFGISTR 201
+ +LA D S S R
Sbjct: 180 AAY-KLALDGLSKDDQSAR 197
>gi|300724172|ref|YP_003713489.1| hypothetical protein XNC1_3319 [Xenorhabdus nematophila ATCC 19061]
gi|297630706|emb|CBJ91371.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
Length = 206
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 68/179 (37%), Gaps = 6/179 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K++A L+L I +L W Y + + L ++ ++ ++ +K
Sbjct: 23 KYLAVGLVLGIGALIGWHYWQTHQTNQLHETA--ATFEVLNKSLASGSKESIAAVDKFAD 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ N +Y ++ + + V K D A + L +A+ ++ + L+ A + +
Sbjct: 81 ETNNIYGVMAELELTKRAVEKNDLAQAEKNLL-IASVKAKDEDMKAVSNLRLARVQLAED 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ K L+++ ++ G K G + A+ + +++ P +
Sbjct: 140 KTDAALKTLKQVKGKG--WLVLTEDLRGDILAKKGDIAGARAAYSR-GLESDGPQKMKD 195
>gi|254252259|ref|ZP_04945577.1| hypothetical protein BDAG_01479 [Burkholderia dolosa AUO158]
gi|124894868|gb|EAY68748.1| hypothetical protein BDAG_01479 [Burkholderia dolosa AUO158]
Length = 209
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 71/185 (38%), Gaps = 6/185 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSN-KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N K AR++ + + Y ++ + A +L A GD+ A + L+ A D
Sbjct: 63 AAANDKTTMARAAADMEDKYGSTAYAQMTALAAAKVLYAAGDSAGA-KAQLQWAVDHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGLVADRRGDLLAAQGKTDDAR 179
Query: 183 TIFEE 187
++
Sbjct: 180 AAYKL 184
>gi|325927623|ref|ZP_08188852.1| hypothetical protein XPE_2879 [Xanthomonas perforans 91-118]
gi|325541990|gb|EGD13503.1| hypothetical protein XPE_2879 [Xanthomonas perforans 91-118]
Length = 212
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 10/147 (6%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + + ++ + LD A + +Y L+ + +A
Sbjct: 41 WQWWQTRTNTALVEANGRYEAVVKSIQAKDLDKAAKDIVALDDGKGGIYAELAALRLAKA 100
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V G A + D A ++ + A +L ++ +E K+L +
Sbjct: 101 QVDAGKNAEAIKTL----RDVPAEGELKQIVQQRLARVLTESGKPDEAIKLLADAQD--- 153
Query: 159 PMHQFANEILGISALKFGKVQKAKTIF 185
+ EI + + GK +A+ ++
Sbjct: 154 ---HASLEIRADALVAQGKPDEARALY 177
>gi|28897384|ref|NP_796989.1| hypothetical protein VP0610 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838547|ref|ZP_01991214.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260876343|ref|ZP_05888698.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
AN-5034]
gi|260898614|ref|ZP_05907110.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
Peru-466]
gi|260899286|ref|ZP_05907681.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
AQ4037]
gi|28805596|dbj|BAC58873.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748062|gb|EDM58921.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308086924|gb|EFO36619.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
Peru-466]
gi|308092840|gb|EFO42535.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
AN-5034]
gi|308106655|gb|EFO44195.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
AQ4037]
gi|328472594|gb|EGF43457.1| hypothetical protein VP10329_12226 [Vibrio parahaemolyticus 10329]
Length = 204
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D + +++ A+
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIIGAVVGLGGLFGWRYYQDTV-IQASETASQSYTTAMNT 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+D I S + K Y+ L+ + +A V D A E K A +
Sbjct: 64 LQEKGVDAQSDVQAFIESNEVKEYSVLAALQLAKAQVEAKDFAAALEQL-KWAQSNTKDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ + + A I + +++ + L K++ E+ G AL+ G A
Sbjct: 123 ALSPLISYRIARIETEMGNFDAANTELGKVT--DTAWAGRIAELRGDIALRQGDKDAAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYTEAQQAADASPTLQ 196
>gi|89095336|ref|ZP_01168254.1| hypothetical protein MED92_00600 [Oceanospirillum sp. MED92]
gi|89080411|gb|EAR59665.1| hypothetical protein MED92_00600 [Oceanospirillum sp. MED92]
Length = 218
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 58/179 (32%), Gaps = 12/179 (6%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVG-------ENFAQAL-ELFNSNKLDDARSSFEK 78
L + + L+ + + + + + AL + KL A +
Sbjct: 27 LGVAVALAAVLGWKGWQSQQAAQAENASVLYQNLLDAVVGALGPQLDDAKLATANHLNGQ 86
Query: 79 ILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
+ + + Y + M +A + V + D A V + ATL+ A I+
Sbjct: 87 LKDEYEGSAYANYAAMIMARVAVDQKDLDKAVAELDYVLANQPTESMF-ILATLRKARIV 145
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ ++ ++ P E+ G L G A+ +++ ++ +
Sbjct: 146 ASQGNVDQALNLVNG--APVGGYKATIEELKGDLYLAQGNTDAARKAYQQASESAAAGS 202
>gi|213962073|ref|ZP_03390338.1| TPR-domain containing protein [Capnocytophaga sputigena Capno]
gi|213955426|gb|EEB66743.1| TPR-domain containing protein [Capnocytophaga sputigena Capno]
Length = 1001
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY-NPLSNMY 94
A W + G ++ A + N +A ++FEK L + Y
Sbjct: 703 AAWAKSLGYVEVTDLELEGASYEAAERQYLQNNSKEAIAAFEKYLKDFPNGLRRTNAEFY 762
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL- 153
+ + G A + V+ A + IL+D SY + L++L
Sbjct: 763 LGQLYFNSGQKAKALTHYENVSKSGS--NEYGEQALTRVCQILLDAGSYLKAKPYLEELE 820
Query: 154 -SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ +A L KA ++ ++ + I + ++LA
Sbjct: 821 KTATIAQNRTYAQSNLMRVCYNEKLYDKAIEYANKVLEEKSIDTRIKNDAYIVLA 875
Score = 36.1 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ + +A++ +G+ A E + + ++ + Q L T E
Sbjct: 105 AYLQMANLYFQQGNYAEALEWYNAI-DELGVSSEEKARFNFQKGYCLFHTGKQAESKPYF 163
Query: 151 QKLSEPSNPMHQ-FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ S +NP++ A LG A KA++ F E+ D +S
Sbjct: 164 E--SVQNNPLYADNAKYYLGYIAYDSDDYAKAESYFREVQDDATLSKNVS 211
>gi|127512224|ref|YP_001093421.1| tetratricopeptide TPR_4 [Shewanella loihica PV-4]
gi|126637519|gb|ABO23162.1| Tetratricopeptide TPR_4 [Shewanella loihica PV-4]
Length = 207
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 5/195 (2%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
S + K + ++ + L W Y D + E F
Sbjct: 5 STEEQQVDAIKQFWKDYGNSIVIG-AVVGLGGLYSWNYYSDYK-VAQAEEASEAFQTISN 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++ A + + Y L + +A V G+ A + ++
Sbjct: 63 SVKADSSMLAAAESFAKDHDGQQGYQALLQLIVAKAAVEAGELDKAEQALKQILV-SKPE 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ ATL+ A + + L++L+ PS +E+ G ++ G KAK
Sbjct: 122 EGLVAVATLRLARVQAEQGQLATALATLEQLNTPS--FAVQRDELKGDFLVRQGDADKAK 179
Query: 183 TIFEELAKDNNSPFG 197
+ ++ + +
Sbjct: 180 SAYQSALDNGGATSS 194
>gi|120598180|ref|YP_962754.1| hypothetical protein Sputw3181_1357 [Shewanella sp. W3-18-1]
gi|120558273|gb|ABM24200.1| conserved hypothetical protein [Shewanella sp. W3-18-1]
Length = 206
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 6/192 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
S + K + ++ + L W Y D K + F QAL
Sbjct: 5 STEEQQVDAIKQFWKDYGTSILIG-AVVGLGGLYGWNYYSD-MKVAKAEEASKAF-QALT 61
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++++ E + D K Y L ++ +A V D A + KV
Sbjct: 62 TKSADEAAMLAGVAEFSKNHDQKGYQALLDLIVAKTAVEAKDYPKAIDALNKVITTKP-G 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ ATL+ A I + + L+K+S E+ G ++ G V+KAK
Sbjct: 121 ASLDTIATLRLARIQAELGQIDAGLATLEKVS--DKAFLAQREELKGDFLVRQGDVEKAK 178
Query: 183 TIFEELAKDNNS 194
T ++ +
Sbjct: 179 TAYQTAMDNGGV 190
>gi|307132058|ref|YP_003884074.1| hypothetical protein Dda3937_03707 [Dickeya dadantii 3937]
gi|306529587|gb|ADM99517.1| conserved protein [Dickeya dadantii 3937]
Length = 206
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 58/162 (35%), Gaps = 4/162 (2%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
+ +++ + + + + E + Q E ++ + + EK ++ D+
Sbjct: 26 AIGVVLGIGALVGWRFWQNHQESNAMAASAAYQQVTESLSAGTP-EGVAGAEKFVTGDHG 84
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
Y L+++ +A V K D A + + + ++ L+ A +L+ +E
Sbjct: 85 NYGALASLALAHQFVEKNDIAKAEQQLRQALSQSKDGD-LQALINLRLARVLLQQKKPDE 143
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
K L + ++ G G Q A+ + +
Sbjct: 144 ALKTLDAIKLEG--WTAMVADVRGDVLASKGDNQGARDAYNK 183
>gi|156932944|ref|YP_001436860.1| hypothetical protein ESA_00747 [Cronobacter sakazakii ATCC BAA-894]
gi|156531198|gb|ABU76024.1| hypothetical protein ESA_00747 [Cronobacter sakazakii ATCC BAA-894]
Length = 206
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 73/196 (37%), Gaps = 4/196 (2%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
ME + N K + +++ + + + ++GS ++
Sbjct: 1 MEIYENENEQLDAVKRFFAENGKALAVGVVLGIGALVGWRFWNGSQVDSAREASLHYQNV 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ ++ S+ ++ ++Q+ Y L+ + +A V K D NAA+ K ++
Sbjct: 61 MTDVRADDPKT-LSAAQQFVAQNQNTYGALAALELAQRYVDKNDLTNAAQQLQK-GLENT 118
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+R L+ A I + + K L+ S ++ G + L G Q
Sbjct: 119 KDENLRSLINLRLARIQIQQKQADAALKTLE--SVKGENWSAMVADLRGDALLSKGDKQG 176
Query: 181 AKTIFEELAKDNNSPF 196
A+ + + A D NSP
Sbjct: 177 ARDAWSKGADDKNSPA 192
>gi|134295841|ref|YP_001119576.1| hypothetical protein Bcep1808_1737 [Burkholderia vietnamiensis G4]
gi|134138998|gb|ABO54741.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length = 209
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 7/199 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + + Y ++ + A L A GD A + L+ A D
Sbjct: 63 AAANDKATMARAAADMEDKFGSTAYAQMTALAAAKTLYASGDAAGA-KAQLQWAADHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGLVADRRGDLLAAQGKTDDAR 179
Query: 183 TIFEELAKDNNSPFGISTR 201
+ +LA D S S R
Sbjct: 180 AAY-KLALDGLSKDDQSAR 197
>gi|323169043|gb|EFZ54720.1| hypothetical protein SS53G_0584 [Shigella sonnei 53G]
Length = 178
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 5/168 (2%)
Query: 29 ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYN 88
IL + +L W Y + ++ + A+ + K D ++ EK +++ Y
Sbjct: 2 ILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTAVSEGKPDSIPAA-EKFAAENKNTYG 59
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
L+++ +A V K + + AA + D ++ L+ A + V + K
Sbjct: 60 ALASLELAQQFVDKNELEKAAAQLQQGLADTS-DENLKAVINLRLARVQVQLKQADAALK 118
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
L + ++ G + L G Q A++ +E K + +P
Sbjct: 119 TLDTIKGEG--WAAIVADLRGKALLSKGDKQGARSAWEAGVKSDVTPA 164
>gi|74316614|ref|YP_314354.1| hypothetical protein Tbd_0596 [Thiobacillus denitrificans ATCC
25259]
gi|74056109|gb|AAZ96549.1| putative membrane protein [Thiobacillus denitrificans ATCC 25259]
Length = 213
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/214 (13%), Positives = 79/214 (36%), Gaps = 6/214 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
+ + + K + + ++ + + ++++ A + + + + Q
Sbjct: 5 DLDEQERLDELKAWWKR--WGSVSMIGLAVLIAAAAGWRYWQNRTVTQSLEAAAVYDQLA 62
Query: 62 ELFNSNKLDDARSSFEKI-LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+N++ AR + + + Y P + + +A + V D K+A A+
Sbjct: 63 RSVAANEVKGAREAGAMLIDKYKDTAYAPRAALLLARLNVGAKDAKSAQTQLEWAASHSK 122
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
P A+R A L+ A++ +D Y+ K L + S+ +++ G + K
Sbjct: 123 EP-AIRDLARLRLAAVQLDQKQYDVALKTLA--ARHSDAFGPRFDDLRGDVLVAQNKPAD 179
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
A+ ++ ++ ++ L + +
Sbjct: 180 ARKAYQAALGAMSADNPYRNVVELKLDGVGGEAK 213
>gi|58040396|ref|YP_192360.1| hypothetical protein GOX1968 [Gluconobacter oxydans 621H]
gi|58002810|gb|AAW61704.1| Hypothetical protein GOX1968 [Gluconobacter oxydans 621H]
Length = 106
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
VA+D+ A A+R A + + T+ + + + L++ A E L L+
Sbjct: 4 VADDNAADPALRDMARYMSLNARTATADPKTLRPGYEALAQGGGAWAPLAQEGLAALDLR 63
Query: 175 FGKVQ----KAKTIFEELAKDNNSPFGISTRSQMILAN 208
G +A+ I ++ N+ G+ R+Q +L
Sbjct: 64 PGATADQQKEARRILTQIVGSENATEGVRARAQALLET 101
>gi|325915369|ref|ZP_08177686.1| hypothetical protein XVE_1577 [Xanthomonas vesicatoria ATCC 35937]
gi|325538416|gb|EGD10095.1| hypothetical protein XVE_1577 [Xanthomonas vesicatoria ATCC 35937]
Length = 212
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + + + ++ LD A + +Y L+ + +A
Sbjct: 41 WQWWQKHTNTELVEANARYEAVVKSIQGKDLDKAAKDIVALDDGKGGIYAELAALRLAKA 100
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V G A + D A +++ + A +L ++ +E K+L + ++
Sbjct: 101 QVDAGKNAEAIKTL----RDVPAEGELKHIVQQRLARVLTESGKPDEAIKLLADAQDNAS 156
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
EI + + GK +A+ ++ +
Sbjct: 157 ------LEIRADALVVQGKTDEARALYAK 179
>gi|239947835|ref|ZP_04699588.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922111|gb|EER22135.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 220
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 67/175 (38%), Gaps = 6/175 (3%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILV 100
+ K G+ + + L + ++ A ++ E +++ N ++ + +I +
Sbjct: 45 YKDKRIKNNQKNGDILIKTVGLETTKDNEELAFNTLENLVTTSNTKIKEIAALEQVAIKI 104
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-----EISKILQKLSE 155
++ A ++ K+ + A + +++D + + +++K L +
Sbjct: 105 SEKKYSEAKDLLNKIIENKEYSEISTSYARISWCGLVIDDQNLDIQDKEKLTKYLNYFDD 164
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
P A I + +K +A+ + L NN I +++ +L N+
Sbjct: 165 EKKPFWATATIIKAMWDIKNNMKPQAEKNLKNLLISNNVSDLIKDQAKALLVNLN 219
>gi|212212369|ref|YP_002303305.1| hypothetical protein CbuG_0764 [Coxiella burnetii CbuG_Q212]
gi|212010779|gb|ACJ18160.1| hypothetical protein CbuG_0764 [Coxiella burnetii CbuG_Q212]
Length = 206
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 5/186 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E +D + K + + IA +++ +L W Y E K + Q
Sbjct: 3 ELLSDQEQIEMIKKWWRDYGRAIALAIVIGLLIGFGWRYWHRHQLE-KTERASALYMQLQ 61
Query: 62 ELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L + N D + ++++ Y +++ A V + A + V +
Sbjct: 62 ILASQNAWDKTKPLTDRLIKDYGKTPYAAMASFLNAKRAVEQNHLPLALDQLQWVMK-NA 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
++ L+A+ IL+ + + +LQ + +EI G G +
Sbjct: 121 IVSDLKQLERLRASRILLAENRPKAALNLLQ--TVDDQAYQPLVDEIKGDIYAAMGNRES 178
Query: 181 AKTIFE 186
AK +E
Sbjct: 179 AKQFYE 184
>gi|161502325|ref|YP_001569437.1| hypothetical protein SARI_00358 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160863672|gb|ABX20295.1| hypothetical protein SARI_00358 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 206
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 67/175 (38%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E + A+ +++K D ++ EK +
Sbjct: 23 KALAVGVILGVGALVGWRYWNSHQTES-ARAASLAYQNAVTAISADKPDSIPAA-EKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L++M +A V K + K A + ++ L+ A + V
Sbjct: 81 ENKNTYGALASMELAQQFVDKNELKKAETQLQQGLAATS-DENLKAVINLRLARVQVQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G ++ A++ +E + SP
Sbjct: 140 QADAALKTLDAIKGEG--WTAIVADLRGEALLSKGDIKGARSAWEAGVNSDASPA 192
>gi|224373433|ref|YP_002607805.1| tetratricopeptide repeat domain protein [Nautilia profundicola AmH]
gi|223589402|gb|ACM93138.1| tetratricopeptide repeat domain protein [Nautilia profundicola AmH]
Length = 756
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 22/152 (14%)
Query: 55 ENFAQALELFNS----NKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
E + + + A ++K + S + L+ + +A + KGD K A
Sbjct: 273 EAYLAMIYWADQMYITGDSKKAFELYKKALYSTKDVDIASLAALRLAQRYMDKGDIKTAF 332
Query: 110 EIFLKVANDDLAPLAVRY------AATLQAA----SILVDTSSYEEISKILQKLSEPSNP 159
E + +V + ++ A + A+ S+ +D E++ K L+KL + P
Sbjct: 333 EYYKRVYQANK-DFILKDKKKAFELAKMLASHQLYSLAIDIG--EDLIKRLKKLDDLYEP 389
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+ + L + + G +KA + +
Sbjct: 390 LEYY----LALWSYDAGDFKKADYWINKYLNE 417
>gi|113460552|ref|YP_718616.1| hypothetical protein HS_0406 [Haemophilus somnus 129PT]
gi|112822595|gb|ABI24684.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 203
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 10/188 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + N K K YK I +++L + W Y D KK + + Q
Sbjct: 5 IEEEQELNELKT---WWKENYKSIIVIVVLAFSGVFGWRYWQDYQTTKK-QTLSAQYDQL 60
Query: 61 LELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
+ + + +A ++ + Y + + A + V++ + A E + A +
Sbjct: 61 ISSAENQSIYNA--QLDRFVQENGETTYAVFALLDKAKLEVSQQNFVQAEETLKQ-AIVN 117
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+ + ++ A++ ++E L + + G L G +
Sbjct: 118 TSDDILMSITAIRLATVQYQLQKFDEALASLNQ--VKGQSWDVSKLLLSGDIQLAKGNKE 175
Query: 180 KAKTIFEE 187
AK FE+
Sbjct: 176 IAKDNFEQ 183
>gi|326444940|ref|ZP_08219674.1| hypothetical protein SclaA2_27915 [Streptomyces clavuligerus ATCC
27064]
Length = 1103
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNP------LSNMYIASILVAKGDTKNAAEIFL 113
A+ + + + D+A + EK++ +L + +AS G T+ A I
Sbjct: 744 AVSYWQAGRTDEAITIEEKVVEDRQRLLGDEHPDTHTARANLASSYWQAGRTEKAITILE 803
Query: 114 KVAND------DLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEPSNPMHQ 162
+V D D P + A L A+ + E++ + Q+L +P
Sbjct: 804 QVVEDRQRLLGDEHPDTLTARANLAASYQQAGRTEKAITILEQVVEDRQRLLGDEHPDTH 863
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMILANIIAS 212
A L S + G+ +KA TI E++ +D + P ++ R+ + ++ A
Sbjct: 864 TARANLASSYWQAGRTEKAITILEQVVEDRQRLLGDEHPDTLTARANLAVSYQQAG 919
Score = 43.4 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQ-----DNKLYNPL-SNMYIASILVAKGDTKNAAEIFL 113
A+ + + D+A + E+++ ++ L + +AS G T A I
Sbjct: 912 AVSYQQAGRTDEAITILEQVVEDIERLLGDEHPGTLTARANLASSYWQAGRTDEAITIEE 971
Query: 114 KVAND------DLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEPSNPMHQ 162
KV D D P + A L A+ + E++ + Q+L +P
Sbjct: 972 KVVEDRQRLLGDEHPGTLTARANLAASYQQAGRTEKAITILEQVVEDRQRLLGDEHPGTL 1031
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMI 205
A L +S + G+ +A TI E++ +D + P ++ R+ +
Sbjct: 1032 TARANLAVSYQQAGRTDEAITILEQVVEDRQRLLGDEHPGTLTARANLA 1080
Score = 41.9 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 23/169 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNP------LSNMYIASILVAKGDTKNAAEIFL 113
A + + + A + E+++ +L + +AS G T+ A I
Sbjct: 828 AASYQQAGRTEKAITILEQVVEDRQRLLGDEHPDTHTARANLASSYWQAGRTEKAITILE 887
Query: 114 KVAND------DLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEPSNPMHQ 162
+V D D P + A L + + E++ + +++L +P
Sbjct: 888 QVVEDRQRLLGDEHPDTLTARANLAVSYQQAGRTDEAITILEQVVEDIERLLGDEHPGTL 947
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMI 205
A L S + G+ +A TI E++ +D + P ++ R+ +
Sbjct: 948 TARANLASSYWQAGRTDEAITIEEKVVEDRQRLLGDEHPGTLTARANLA 996
Score = 38.0 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGIS 199
+++ ++L +P A L S + G+ +KA TI E++ +D + P ++
Sbjct: 679 MTERAEQLLGDEHPGTLTARANLASSYWQAGRTEKAITILEQVVEDRQRLLGDEHPGTLT 738
Query: 200 TRSQMILANIIAS 212
R+ + ++ A
Sbjct: 739 ARANLAVSYWQAG 751
>gi|254363200|ref|ZP_04979249.1| hypothetical protein MHA_2783 [Mannheimia haemolytica PHL213]
gi|261493282|ref|ZP_05989809.1| hypothetical protein COK_1691 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496474|ref|ZP_05992854.1| hypothetical protein COI_2192 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153095094|gb|EDN75645.1| hypothetical protein MHA_2783 [Mannheimia haemolytica PHL213]
gi|261307677|gb|EEY09000.1| hypothetical protein COI_2192 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311132|gb|EEY12308.1| hypothetical protein COK_1691 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 206
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 9/184 (4%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ ++ K I +IL + A W + + E ++ +E +
Sbjct: 10 EEQQFEDAKNWFKENGTPILVAIILACAATAGWNFWKNHQLET-AQKTSASYQSVMESYL 68
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
N + + I + Y + +A V KG+ A V + +
Sbjct: 69 QNPSKNQPLVEKFIADNKDSSYAAFAQFEVAKQAVEKGNFSAAKTALQSVL--TYSDSTL 126
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ--FANEILGISALKFGKVQKAKT 183
+ A + A I SY+E L ++ + + + + +IL G + AK+
Sbjct: 127 QSIARFRLAQIDFQLKSYDEALASLAQIQDKAWELRKQILTGDILAA----KGDIPAAKS 182
Query: 184 IFEE 187
+E+
Sbjct: 183 AYEQ 186
>gi|59711238|ref|YP_204014.1| hypothetical protein VF_0631 [Vibrio fischeri ES114]
gi|59479339|gb|AAW85126.1| conserved protein [Vibrio fischeri ES114]
Length = 203
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 61/150 (40%), Gaps = 3/150 (2%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
+ + S K + +AL ++ D S+ I + + Y L+ + +A
Sbjct: 38 GWKYYQSSQITAKETASAAYERALTALQASGADAVESTQAFIDANKSSEYASLAALQLAK 97
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
+ V G +NA E VA++ ++ A +++A I + +++ L + S
Sbjct: 98 VQVEAGQLENALEQLNWVASNSK-DESLTAMAQVRSARIQAEQGNFDAALATLANVKPAS 156
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEE 187
E+ G AL+ G + A++ + E
Sbjct: 157 WAARVA--ELKGDIALRQGDIATARSSYTE 184
>gi|27363893|ref|NP_759421.1| hypothetical protein VV1_0425 [Vibrio vulnificus CMCP6]
gi|37678952|ref|NP_933561.1| hypothetical protein VV0768 [Vibrio vulnificus YJ016]
gi|27360010|gb|AAO08948.1| putative membrane protein [Vibrio vulnificus CMCP6]
gi|37197694|dbj|BAC93532.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 204
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 71/196 (36%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + + K K + ++ + L W Y D S + + +N+ A+
Sbjct: 5 NTEEEQVEAIKDWWKENGKAVIIGAVVGLGGLFGWRYYQD-SVTQAREAASQNYTSAINA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ + A I S D K Y+ L+ + +A V GD A K A +
Sbjct: 64 LQAKGAEAAADVEAFIASNDVKEYSVLAALQLAKAQVTAGDLNAALTQL-KWAQSNSKDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ T + A + + +++ L K++ E+ G AL+ G + A
Sbjct: 123 ALIPLTTYRIARVEAELGNFDAAKAELAKVT--DASWTGRVAELRGDIALRQGDKEAAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYSEAQQAADAGQTLQ 196
>gi|77461244|ref|YP_350751.1| thioredoxin [Pseudomonas fluorescens Pf0-1]
gi|77385247|gb|ABA76760.1| putative thioredoxin [Pseudomonas fluorescens Pf0-1]
Length = 290
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 2/126 (1%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ F QA LF+ + DA + +L +DN L + A L +G+ A
Sbjct: 117 APSAADPFEQAQALFDEGRYADAEAKLVVLLGEDNTNAKAL--ILYARCLTERGELGEAQ 174
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ V +D+ A ++ + D ++ L + + ++Q A + L
Sbjct: 175 TVLDAVKSDEHKAALAGAKAQIKFLGLARDLPDAADLKSRLAQNPQDDEAVYQLAIQQLA 234
Query: 170 ISALKF 175
+
Sbjct: 235 RQQYEA 240
>gi|262374930|ref|ZP_06068164.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309943|gb|EEY91072.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 232
Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 14/188 (7%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
D K K I +LI +I F+ ++ +K + A+ +L +
Sbjct: 7 DEQFESLKSFTKKYGSSMITGILIALIA-----FFGWEYWQKKNLAESQMHTAKVQQLMD 61
Query: 66 SNK------LDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVAND 118
+ + +KI+ + + + + +A + K D A + KV N
Sbjct: 62 DAQASKGDGFAKLSEAADKIVKEAPDSAQAIQTQLVMAKLAYDKEDYAAAEKALQKVENS 121
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
+ + L+ A + Y+ K L+ ++EP A+E G + +
Sbjct: 122 KVDDKGLVQVVKLRLAYAQLAQKKYDAALKTLEAVTEP--AFKATADEARGDIYVAKNDI 179
Query: 179 QKAKTIFE 186
+ AK +++
Sbjct: 180 ENAKKVYQ 187
>gi|255321135|ref|ZP_05362301.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262380176|ref|ZP_06073331.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255301689|gb|EET80940.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262298370|gb|EEY86284.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 234
Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 12/202 (5%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDD-----A 72
K K +I IL I F+ ++ +K A+ +L + + + A
Sbjct: 14 KSFTKKYGSAIISGILIALIAFFGWEYWQKKTLAENQMRTAKVQQLMDEARNVNSQDINA 73
Query: 73 RSSF----EKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
++ +KI+ + + L + +A +GD A + +V L + +
Sbjct: 74 LNALSQSADKIVKEAPDSVHALQAQFVMAKQAYDRGDYAAAEKALKRVEATKLKDEGLVH 133
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
L+ A + + Y+ K L +++P A E G + + A+ ++
Sbjct: 134 VLKLRLAYAQLAQNKYDAALKTLADVTDP--AFKATAEEARGDVYVAKNDIASARKAYQS 191
Query: 188 LAKDNNSPFGISTRSQMILANI 209
Q+ L ++
Sbjct: 192 AWDALAERKKERQILQIKLESV 213
>gi|238794828|ref|ZP_04638429.1| hypothetical protein yinte0001_7860 [Yersinia intermedia ATCC
29909]
gi|238725841|gb|EEQ17394.1| hypothetical protein yinte0001_7860 [Yersinia intermedia ATCC
29909]
Length = 206
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA ++N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQNTVLTEASS-AYQQASNALSANSADGVAFA-EKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+N Y L+ + +A V + AA+ + + L+ A + +
Sbjct: 81 GNNNNYGVLAGLELAHHFVEQNVFDKAAQQLTQALGQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
++ K L + A ++ G + L G A+ + + ++N+ +
Sbjct: 140 KPDDALKTLDAVQGDG--WTAMAQDVRGDALLSKGDTAGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|145640320|ref|ZP_01795904.1| hypothetical protein CGSHiR3021_09685 [Haemophilus influenzae
R3021]
gi|145274906|gb|EDK14768.1| hypothetical protein CGSHiR3021_09685 [Haemophilus influenzae
22.4-21]
Length = 204
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 56/194 (28%), Gaps = 11/194 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQAHQAEQIAQ-ASAQYDTL 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ N+ + + + + Y + + A K D A + A
Sbjct: 61 INSVQQNEQAKKANIEQFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALTQS 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFGKV 178
+ L+ +++ + L ++ S A + + G + G
Sbjct: 120 QDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKGDK 175
Query: 179 QKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 176 VAAKNSFEQAQQSG 189
>gi|117618106|ref|YP_856297.1| TPR repeat-containing protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559513|gb|ABK36461.1| tetratricopeptide repeat family [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 216
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 6/192 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+ + K + IA +I ++ L W Y + + + + +
Sbjct: 5 TTEEQQVEVIKSWWKENGTSVIAGTVI-GLVGLFGWRYYNEHQQTSQ-ETASQAYNEMAA 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ I + Y L+ + +A+ V G A E +VA
Sbjct: 63 QLAKGDAAGFEQAQSFISAHKGDSYAELAALQLAAAAVKAGKLDLAVEQLTQVA--TSGD 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++R A L+ A +L D +E L K++ E+ G LK GK ++A+
Sbjct: 121 ESIRPIAALRLARVLNDQGKADEALAQLGKINND--AFKAQVAEVRGDVLLKQGKAEEAR 178
Query: 183 TIFEELAKDNNS 194
++ A
Sbjct: 179 DAYQAAADAGGL 190
>gi|254786614|ref|YP_003074043.1| tetratricopeptide repeat family protein [Teredinibacter turnerae
T7901]
gi|237686657|gb|ACR13921.1| tetratricopeptide repeat family protein [Teredinibacter turnerae
T7901]
Length = 234
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 14/213 (6%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQ----- 59
++ + + + + +IL + W D K + + Q
Sbjct: 6 SEEEQVEAIKRWWNENWVSVVLPIILALGGYLGWNSWQDHKQ-GKAEQASDLYQQLAMAA 64
Query: 60 ----ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
L + S+ I + LY ++N+ +A I V G AA V
Sbjct: 65 EVAPGETLSEEQRAAIDESANVIIDAHGGTLYADMANLLLAKIQVEGGQLDAAAARLQAV 124
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D+ A A++ A + A ++ + ++ + S EI G
Sbjct: 125 V-DNGADEAIQQVAKARLARVMSAKGDHSAALSMVAQ--TDSQSFKALFAEIRGDVYSAQ 181
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILAN 208
GK+ +A T ++ A D P + RS + L
Sbjct: 182 GKLAEANTEYQA-ALDTLLPSEFNRRSLIQLKL 213
>gi|89901083|ref|YP_523554.1| hypothetical protein Rfer_2305 [Rhodoferax ferrireducens T118]
gi|89345820|gb|ABD70023.1| conserved hypothetical transmembrane protein [Rhodoferax
ferrireducens T118]
Length = 240
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 6/154 (3%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
++ + K I LIL++ + A W + + +
Sbjct: 5 LDLEEQEQLDQLKHFWKSYG-NAITWALILVLGAFASWNFYQYWQRNQATQAAAMYDEVE 63
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+ + ++ K+D A + + + Y + + +A + G+ + A V D
Sbjct: 64 RVVTSADTAKIDRAFADMKDRFASTT--YAHQAGLLVAKYYYSVGNAQAAKSALGWVV-D 120
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
+ + A L+ A +L+D+ +++E + L
Sbjct: 121 KSSDPGYQAIAKLRLAGLLMDSKAFDEALQQLSG 154
>gi|225024246|ref|ZP_03713438.1| hypothetical protein EIKCOROL_01118 [Eikenella corrodens ATCC
23834]
gi|224943271|gb|EEG24480.1| hypothetical protein EIKCOROL_01118 [Eikenella corrodens ATCC
23834]
Length = 209
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 5/167 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+W+ LL++ + W ++ N F Q E +NK +A ++ S
Sbjct: 24 RWLFALLVVAAIGYFGWV-MYSSHQRSVNNEAVAVFDQWAENQQANKPAEAAKLLTQLQS 82
Query: 82 QDNKLY-NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
Q + + A +G A V PL +R A + A++ +
Sbjct: 83 QYPTSISAAQATLMQAGAAFDQGKYDEAIGHLNWVLKYHQEPL-IRAMAIQRLATVQLQQ 141
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
Y++ L E G GK +A +++
Sbjct: 142 QKYDDAIATLG--MNTDEAYAGILLETKGDVYAAQGKRSEAAAAYKQ 186
>gi|238797966|ref|ZP_04641456.1| hypothetical protein ymoll0001_28280 [Yersinia mollaretii ATCC
43969]
gi|238718171|gb|EEQ09997.1| hypothetical protein ymoll0001_28280 [Yersinia mollaretii ATCC
43969]
Length = 206
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + ++N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQNTAMTEASS-AYQQASDALSANSADGVTLA-EKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V + + AA+ + + L+ A + +
Sbjct: 81 GNKNNYGVLAGLELAHHFVEQNEFDKAAQQLTQALGQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+E K L + A ++ G + L G + A+ + + ++N+ +
Sbjct: 140 KPDEALKTLD--AVQGEGWTAMAQDVRGDALLSKGDISGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|297568699|ref|YP_003690043.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924614|gb|ADH85424.1| Tetratricopeptide TPR_4 [Desulfurivibrio alkaliphilus AHT2]
Length = 222
Score = 48.4 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 10/205 (4%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
++ N + Y+ I + ++++++ W + + + A+++
Sbjct: 24 DELNLPPAAAEFLNVWYRHILAAIGIVVVAILTWSLSQQYV-TSRAEQSSQQLSVAMQIA 82
Query: 65 NSNKLDDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ A E++ S + S + +A + GD + AA+ + ++
Sbjct: 83 DPAARAQA---LEEVASSYRRTGAGIWSRIELAHLARDAGDLEGAAQAYQELLGTISRRD 139
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL--KFGKVQKA 181
A R L A +L + E+ + ++L+E A +LG + + G + A
Sbjct: 140 ARRPMVQLSLAQVLSELGQDEQALRYYRELAETPG---FEAWGLLGTGDVMARRGDTEAA 196
Query: 182 KTIFEELAKDNNSPFGISTRSQMIL 206
+ + ++ + N+P + +++ L
Sbjct: 197 REKYRQVTEKTNAPLLVLEQAESRL 221
>gi|157828189|ref|YP_001494431.1| hypothetical protein A1G_01785 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932891|ref|YP_001649680.1| hypothetical protein RrIowa_0378 [Rickettsia rickettsii str. Iowa]
gi|157800670|gb|ABV75923.1| hypothetical protein A1G_01785 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907978|gb|ABY72274.1| hypothetical protein RrIowa_0378 [Rickettsia rickettsii str. Iowa]
Length = 220
Score = 48.4 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 48 KKKNIVGENFAQALELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
K G+ + + L + ++ A ++ E +++ N ++ + +I ++K
Sbjct: 51 KNNQKNGDILVKTVGLETTKDNEELAFNTLENLVTTSNTKIKEIAALEQVAIKISKKKYS 110
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDT-----SSYEEISKILQKLSEPSNPMH 161
A ++ K+ + A + S+++D E+++K L + P
Sbjct: 111 EAKDLLNKIIENKEYSEISTSYARISWCSLVMDDHNLDIQDKEKLTKYLNYFDDEKKPFW 170
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
A I + +K +A+ + L NN I +++ +L N+
Sbjct: 171 ATATIIKAMWDIKNNMKPQAEKNLKNLLISNNVSDLIKDQAKALLVNLN 219
>gi|301169072|emb|CBW28669.1| conserved protein [Haemophilus influenzae 10810]
Length = 204
Score = 48.4 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 45/159 (28%), Gaps = 9/159 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQTHQVEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
+ L+ +++ + L ++ S
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES 156
>gi|148825347|ref|YP_001290100.1| hypothetical protein CGSHiEE_01155 [Haemophilus influenzae PittEE]
gi|148827509|ref|YP_001292262.1| hypothetical protein CGSHiGG_04660 [Haemophilus influenzae PittGG]
gi|260582538|ref|ZP_05850328.1| chaperone HscA [Haemophilus influenzae NT127]
gi|148715507|gb|ABQ97717.1| chaperone protein HscA [Haemophilus influenzae PittEE]
gi|148718751|gb|ABQ99878.1| hypothetical protein CGSHiGG_04660 [Haemophilus influenzae PittGG]
gi|260094349|gb|EEW78247.1| chaperone HscA [Haemophilus influenzae NT127]
Length = 204
Score = 48.4 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 11/194 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + N K + K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---EWWKENGKTIIVAFILGVGGMFGWRYWQAHQAEQIAQ-ASAQYDAL 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ ++ + + + + Y + + A K D A + A
Sbjct: 61 INSVQQDEQAKKANIEQFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALTQS 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFGKV 178
+ L+ +++ + L ++ S A + + G + G
Sbjct: 120 QDEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGES----FNARKAILTGDIQIAKGDK 175
Query: 179 QKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 176 VAAKNSFEQAQQSG 189
>gi|145631823|ref|ZP_01787582.1| hypothetical protein CGSHi22421_06618 [Haemophilus influenzae
R3021]
gi|144982542|gb|EDJ90096.1| hypothetical protein CGSHi22421_06618 [Haemophilus influenzae
R3021]
Length = 204
Score = 48.4 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQSHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|326316282|ref|YP_004233954.1| hypothetical protein Acav_1465 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373118|gb|ADX45387.1| Protein of unknown function DUF2133 [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 221
Score = 48.4 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 24 IAPLLILMILSLAIW--FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
I+ +++++ +A W + + + + + A+ A +F+ + S
Sbjct: 27 ISGVMVVIFGGVAAWNGYQYWQNRQSGQAAALSDAVQVAV---QGGDAARATQAFDDLKS 83
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ +A+ + + A+ L+ D+ + + A+L+ A +L+D
Sbjct: 84 RYGGTVQAAQAGLLAAKAMVDSGNPDGAKPILQWLADNASDEGYKAIASLRLAGLLIDQK 143
Query: 142 SYEEISKILQK 152
+Y++ L
Sbjct: 144 AYDQALARLSG 154
>gi|255021267|ref|ZP_05293316.1| putative membrane protein [Acidithiobacillus caldus ATCC 51756]
gi|254969278|gb|EET26791.1| putative membrane protein [Acidithiobacillus caldus ATCC 51756]
Length = 203
Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 66/185 (35%), Gaps = 4/185 (2%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L+ +++ A+ F+ + + +++ + +N+L A+ S + +L +
Sbjct: 18 ILVFALVVLGAMGFFGYAKYQRHQMAQAAAVYSELTQSMAANQLAAAQVSAQTLLQKYPD 77
Query: 86 L-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y ++ + A + + + A + D P + A A + +D
Sbjct: 78 TPYATMARFFTARMAMMQHHEAQAQAQLEAILKKDHLPTGMAGLARFTLAELQLDQG--- 134
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
+ K L L P E+ G + KA+ + + + + Q+
Sbjct: 135 QAKKALDTLGAPGTVYAPLYWELRGDAHEYLRAWPKARQDYLKAEQALPATDPYRAYLQL 194
Query: 205 ILANI 209
LANI
Sbjct: 195 KLANI 199
>gi|68248973|ref|YP_248085.1| hypothetical protein NTHI0490 [Haemophilus influenzae 86-028NP]
gi|68057172|gb|AAX87425.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 204
Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQSHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATQKQDFSAAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|330830066|ref|YP_004393018.1| tetratricopeptide repeat family protein [Aeromonas veronii B565]
gi|328805202|gb|AEB50401.1| Tetratricopeptide repeat family [Aeromonas veronii B565]
Length = 216
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 5/189 (2%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + K + ++ ++ L W Y E ++ Q +E
Sbjct: 7 EEQQVEVIKEWWKENGTSVIAGTVIGLVGLFGWRYYNQHQQET-MEASSHSYNQVIEQLA 65
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ + + + Y L+ + +A+ V G AAE VA ++
Sbjct: 66 KGDAAGFEQAQQFVTANKGDSYGELAALQLAAAAVKAGKLDLAAEQLNLVATTG--DESI 123
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A L+ A +L D +E L + E G K GK ++A+ +
Sbjct: 124 RPIAALRLARVLNDQGKADEALAKLATIQNE--AFKAQVAEARGDVLQKQGKTEEARDAY 181
Query: 186 EELAKDNNS 194
+ A
Sbjct: 182 QAAADAGGL 190
>gi|218514897|ref|ZP_03511737.1| hypothetical protein Retl8_14927 [Rhizobium etli 8C-3]
Length = 83
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E N + S + K + + ++ ++I+ L++ + + + G+ F A+
Sbjct: 11 EVNEELRSDQMKGVWRR--FGRYIIVVAILIVVGTAGKVLYEYWDDNRSSSAGDQFLAAM 68
Query: 62 ELFNSNKLDDARSSF 76
+L + NK D+A ++
Sbjct: 69 KLADENKNDEALAAL 83
>gi|16272318|ref|NP_438531.1| hypothetical protein HI0370 [Haemophilus influenzae Rd KW20]
gi|260580567|ref|ZP_05848395.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1175233|sp|P43989|Y370_HAEIN RecName: Full=UPF0070 protein HI_0370
gi|1573339|gb|AAC22028.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092909|gb|EEW76844.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 204
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQTHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|146293746|ref|YP_001184170.1| hypothetical protein Sputcn32_2650 [Shewanella putrefaciens CN-32]
gi|145565436|gb|ABP76371.1| conserved hypothetical protein [Shewanella putrefaciens CN-32]
gi|319427120|gb|ADV55194.1| Protein of unknown function DUF2133 [Shewanella putrefaciens 200]
Length = 206
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 6/192 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
S + K + ++ + L W Y D K + F QAL
Sbjct: 5 STEEQQVDAIKQFWKDYGTSILIG-AVVGLGGLYGWNYYSD-MKVAKAEEASKAF-QALT 61
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++++ E + D K Y L ++ +A V D A + KV
Sbjct: 62 TKSADEAAMLAGVAEFSKNHDQKGYQALLDLIVAKTAVEAKDYPKAIDALNKVITAKP-G 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ ATL+ A I + + L+K+S E+ G ++ G V+KAK
Sbjct: 121 ASLDTIATLRLARIQAELGQIDAGLATLEKVS--DKAFLAQREELKGDFLVRQGDVEKAK 178
Query: 183 TIFEELAKDNNS 194
T ++ +
Sbjct: 179 TAYQTAMDNGGV 190
>gi|237745513|ref|ZP_04575993.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229376864|gb|EEO26955.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 215
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 7/194 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
K K WI +LI+++ A++ Y ++ + + +
Sbjct: 7 EQEQLESIKAWWKKHG-NWITWVLIIVLGCYAVYAYWGYYQRKQTAQ-ASQLYYEMQSAV 64
Query: 65 NSNKLDDARS-SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
S + A + + Y P+ + A + + D A + D+
Sbjct: 65 LSGDSERALRVAKDTQEKFGGTAYAPMVTLVAARMAYEEKDADTAKSQLKWIV-DNGKQD 123
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ A ++ A IL+D +Y+E K+L P A + G + K+ +A+
Sbjct: 124 GYKAIARIRLAGILLDEKAYDEGMKLLS--VSFPEPFASLAEDRKGDFLVAQNKLAEARI 181
Query: 184 IFEELAKDNNSPFG 197
++ A + P
Sbjct: 182 AYQT-ALEKALPDD 194
>gi|238763552|ref|ZP_04624513.1| hypothetical protein ykris0001_7670 [Yersinia kristensenii ATCC
33638]
gi|238698184|gb|EEP90940.1| hypothetical protein ykris0001_7670 [Yersinia kristensenii ATCC
33638]
Length = 206
Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + +N D+ + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQNTVLTEASS-AYQQASDALLAN-SADSVALAEKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V + + AA+ + + L+ A + +
Sbjct: 81 GNKNNYGVLAGLELAHHFVEQNEFDKAAQQLTQALGQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+E K L + A ++ G + L G A+ + + ++N+ +
Sbjct: 140 KPDEALKTLDAVQGDG--WTAMAQDVRGDALLSKGDTAGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|53802990|ref|YP_115283.1| hypothetical protein MCA2890 [Methylococcus capsulatus str. Bath]
gi|53756751|gb|AAU91042.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 211
Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 67/166 (40%), Gaps = 2/166 (1%)
Query: 29 ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK-LY 87
+ + +++ + + + S E+K + G + Q L+ + + + A E+I Q Y
Sbjct: 29 VALGIAVIVGWGAWKRSQEEKALLGGTLYQQLLDAVANKQTEAAVQLGERISQQFPGSAY 88
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
+ +++ + V GD A ++ ++ A L+ A I + EE
Sbjct: 89 DTYGKLFLVRLKVEAGDLAGAKTQLQQLIATTKDEKILQ-IARLRLAEIQLGLGETEEAL 147
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
++ + L+ + E+ G L + ++A+ + + +D
Sbjct: 148 RLAESLTGSTPESAALREELKGDVYLAMNRPEEARAAYLKARRDGQ 193
>gi|148979609|ref|ZP_01815614.1| hypothetical protein VSWAT3_08983 [Vibrionales bacterium SWAT-3]
gi|145961694|gb|EDK26991.1| hypothetical protein VSWAT3_08983 [Vibrionales bacterium SWAT-3]
Length = 204
Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+++ + K K + ++ + L W Y D E + E++ +
Sbjct: 5 DSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAR-EAASESYTTVISA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ +D I + + Y+ L+ M +A + V G+ A E + A
Sbjct: 64 LDAKGVDAQSDIQAFIDANKDAEYSVLAAMQLAKVQVQAGELSAALEQL-EWAKAATKDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ T + A I + ++ L +++ S E+ G +L+ G A +
Sbjct: 123 ALSPLLTYRVARIKAEQGEFDAALSDLAAVTDES--WKGRVAELRGDISLRKGDTDAAYS 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYTEAQQAVDASQTLQ 196
>gi|319896699|ref|YP_004134892.1| hypothetical protein HIBPF03170 [Haemophilus influenzae F3031]
gi|317432201|emb|CBY80553.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 204
Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQTHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|197335105|ref|YP_002155388.1| Tetratricopeptide repeat family protein [Vibrio fischeri MJ11]
gi|197316595|gb|ACH66042.1| Tetratricopeptide repeat family protein [Vibrio fischeri MJ11]
Length = 203
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 61/150 (40%), Gaps = 3/150 (2%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
+ + S K + +AL ++ D S+ I + + Y L+ + +A
Sbjct: 38 GWKYYQSSQITAKETASAAYERALTALQASGADAVESTQVFIDANKSSEYASLAALQLAK 97
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
+ V G +NA E VA++ ++ A +++A I + +++ L + S
Sbjct: 98 VQVEAGQLENALEQLNWVASNSK-DESLTAMAQVRSARIQAEQGNFDAALATLANVKPAS 156
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEE 187
E+ G AL+ G + A++ + E
Sbjct: 157 WAARVA--ELKGDIALRQGDIATARSAYTE 184
>gi|91225137|ref|ZP_01260359.1| hypothetical protein V12G01_12955 [Vibrio alginolyticus 12G01]
gi|269965172|ref|ZP_06179306.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91190080|gb|EAS76351.1| hypothetical protein V12G01_12955 [Vibrio alginolyticus 12G01]
gi|269830158|gb|EEZ84385.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 204
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D S + +++ A+
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIIGAVVGLGGLFGWRYYQD-SVIQASEAASQSYTTAMNA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
D I S + K Y+ L+ + +A V D A E K A +
Sbjct: 64 LQDKGTDAQADVKAFIESNEVKEYSVLAALQLAKAQVEAQDLSAALEQL-KWAQSNTQDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ + + A I + +++ + L ++ E+ G A++ G A
Sbjct: 123 ALLPLISYRIARIETEMGNFDAATAELSNVT--DTAWTGRIAELRGDIAIRQGDKDAAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYTEAQQAADASPTLQ 196
>gi|254389236|ref|ZP_05004465.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|37575532|gb|AAQ93527.1| putative ATP/GTP binding protein [Streptomyces clavuligerus]
gi|197702952|gb|EDY48764.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 1009
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNP------LSNMYIASILVAKGDTKNAAEIFL 113
A+ + + + D+A + EK++ +L + +AS G T+ A I
Sbjct: 650 AVSYWQAGRTDEAITIEEKVVEDRQRLLGDEHPDTHTARANLASSYWQAGRTEKAITILE 709
Query: 114 KVAND------DLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEPSNPMHQ 162
+V D D P + A L A+ + E++ + Q+L +P
Sbjct: 710 QVVEDRQRLLGDEHPDTLTARANLAASYQQAGRTEKAITILEQVVEDRQRLLGDEHPDTH 769
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMILANIIAS 212
A L S + G+ +KA TI E++ +D + P ++ R+ + ++ A
Sbjct: 770 TARANLASSYWQAGRTEKAITILEQVVEDRQRLLGDEHPDTLTARANLAVSYQQAG 825
Score = 42.7 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQ-----DNKLYNPL-SNMYIASILVAKGDTKNAAEIFL 113
A+ + + D+A + E+++ ++ L + +AS G T A I
Sbjct: 818 AVSYQQAGRTDEAITILEQVVEDIERLLGDEHPGTLTARANLASSYWQAGRTDEAITIEE 877
Query: 114 KVAND------DLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEPSNPMHQ 162
KV D D P + A L A+ + E++ + Q+L +P
Sbjct: 878 KVVEDRQRLLGDEHPGTLTARANLAASYQQAGRTEKAITILEQVVEDRQRLLGDEHPGTL 937
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMI 205
A L +S + G+ +A TI E++ +D + P ++ R+ +
Sbjct: 938 TARANLAVSYQQAGRTDEAITILEQVVEDRQRLLGDEHPGTLTARANLA 986
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 23/169 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNP------LSNMYIASILVAKGDTKNAAEIFL 113
A + + + A + E+++ +L + +AS G T+ A I
Sbjct: 734 AASYQQAGRTEKAITILEQVVEDRQRLLGDEHPDTHTARANLASSYWQAGRTEKAITILE 793
Query: 114 KVAND------DLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEPSNPMHQ 162
+V D D P + A L + + E++ + +++L +P
Sbjct: 794 QVVEDRQRLLGDEHPDTLTARANLAVSYQQAGRTDEAITILEQVVEDIERLLGDEHPGTL 853
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMI 205
A L S + G+ +A TI E++ +D + P ++ R+ +
Sbjct: 854 TARANLASSYWQAGRTDEAITIEEKVVEDRQRLLGDEHPGTLTARANLA 902
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGIS 199
+++ ++L +P A L S + G+ +KA TI E++ +D + P ++
Sbjct: 585 MTERAEQLLGDEHPGTLTARANLASSYWQAGRTEKAITILEQVVEDRQRLLGDEHPGTLT 644
Query: 200 TRSQMILANIIAS 212
R+ + ++ A
Sbjct: 645 ARANLAVSYWQAG 657
>gi|145634634|ref|ZP_01790343.1| hypothetical protein CGSHiAA_05396 [Haemophilus influenzae PittAA]
gi|145268179|gb|EDK08174.1| hypothetical protein CGSHiAA_05396 [Haemophilus influenzae PittAA]
Length = 204
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 56/189 (29%), Gaps = 11/189 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + N K + K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---EWWKENGKTIIVAFILGVGGMFGWRYWQAHQAEQIAQ-ASAQYDAL 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ ++ + + + + Y + + A K D A + A
Sbjct: 61 INSVQQDEQAKKANIEQFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALTQS 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFGKV 178
+ L+ +++ + L ++ S A + + G + G
Sbjct: 120 QDEVLTSIIALRLSAVQFQLGQLDNALSTLNQVKGES----FNARKAILTGDIQVAKGDK 175
Query: 179 QKAKTIFEE 187
AK FE+
Sbjct: 176 VAAKNSFEQ 184
>gi|283780651|ref|YP_003371406.1| hypothetical protein Psta_2881 [Pirellula staleyi DSM 6068]
gi|283439104|gb|ADB17546.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
Length = 1076
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Query: 65 NSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
K + A ++FE +L + + M A L+ KGD A ++F +VA
Sbjct: 209 ELGKYEPALATFETLLKEFPESKLATEVTMRKAEALLQKGDLAAAEKLFGEVAAVKGFSQ 268
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA--LKFGKVQKA 181
A A L+ + L + E + +L KL A+ LG + + +A
Sbjct: 269 A--DYALLRQGTALAKQEKFPEAAAVLVKLVTDFGSSAYVADATLGAARYFYRANNDAEA 326
Query: 182 KTIFEELAK 190
+T +++ +
Sbjct: 327 ETWLKKVVE 335
>gi|167623301|ref|YP_001673595.1| tetratricopeptide repeat-containing protein [Shewanella
halifaxensis HAW-EB4]
gi|167353323|gb|ABZ75936.1| tetratricopeptide TPR_4 [Shewanella halifaxensis HAW-EB4]
Length = 206
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 8/160 (5%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDA-RSSFEKILSQ-DNKLYNPLSNMY 94
+ + + E+F L N N D A + E + K Y L +
Sbjct: 37 FGWNYYSDYQVAQAEAASESFQA---LSNQNSSDAAMLGAAENFAKEHGQKGYQSLLELL 93
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
+A V GD A V + ++ AT++ A + + Y L +++
Sbjct: 94 VAKSAVEAGDLDKAETTLKTVIATN-VDNSIVLIATMRLARVQAEKGQYATAITTLDQIT 152
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+P++ + E+ G ++ G+ +KAK ++ + +
Sbjct: 153 DPASVAQRD--ELKGDFLVRQGETEKAKVAYQTAVDNGGT 190
>gi|171913852|ref|ZP_02929322.1| serine/threonine protein kinase [Verrucomicrobium spinosum DSM
4136]
Length = 793
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 52/150 (34%), Gaps = 11/150 (7%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL--SNMYIASILVA 101
G+ E V + F +A K +AR F+ ++S L + A +
Sbjct: 367 GTSEASTETVADIFLRARGTLLEGKFAEARKLFDGLISSGRAKQPTLNWARFNAALCAMV 426
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
G ++A + F + D A + + + +++ ++
Sbjct: 427 DGKRQDAEKYFESIRQDAGAGSEMSGV-EFKEFFGKIGGRMSQDLGL---GMARREVSYE 482
Query: 162 QFANEIL-----GISALKFGKVQKAKTIFE 186
+ + E+L G++ FGK + A E
Sbjct: 483 ETSEEVLGYLAHGLAQWHFGKPRAAVEWLE 512
>gi|254228664|ref|ZP_04922088.1| TPR repeat containing protein [Vibrio sp. Ex25]
gi|262395116|ref|YP_003286970.1| hypothetical protein VEA_004347 [Vibrio sp. Ex25]
gi|151938843|gb|EDN57677.1| TPR repeat containing protein [Vibrio sp. Ex25]
gi|262338710|gb|ACY52505.1| putative membrane protein [Vibrio sp. Ex25]
Length = 204
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D S + +++ A+
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIIGAVVGLGGLFGWRYYQD-SVIQASEAASQSYTTAMNA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
D I S + K Y+ L+ + +A V D A E K A +
Sbjct: 64 LQDKGTDAQADVKAFIESNEVKEYSVLAALQLAKAQVEAQDLSAALEQL-KWAQSNTQDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ + + A I + +++ + L ++ E+ G A++ G A
Sbjct: 123 ALLPLISYRIARIETEMGNFDAATAELSNVT--DAAWTGRIAELRGDIAIRQGDKDAAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYTEAQQAADASPTLQ 196
>gi|158522429|ref|YP_001530299.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511255|gb|ABW68222.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 827
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 57/145 (39%), Gaps = 8/145 (5%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L + +A FE +L +D + + M +A I +GD + A + K D A
Sbjct: 536 LLAQRREQEAAVLFEAVLQKDPG--HTEALMNLALIADKQGDREKTAALLEKAIRLDPAS 593
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
A +L T + + L++ + P H A+ +G L+ GK +A
Sbjct: 594 AE----ARYHLGELLARTGNPDNAMAQLEQ-ALHLKPDHALAHNAMGNLWLQAGKTDRAI 648
Query: 183 TIFEE-LAKDNNSPFGISTRSQMIL 206
+++ +A D + + ++
Sbjct: 649 DHYQKAIAIDPGFAAAHTNLADALV 673
>gi|16761436|ref|NP_457053.1| hypothetical protein STY2766 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16765841|ref|NP_461456.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29140867|ref|NP_804209.1| hypothetical protein t0335 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56412600|ref|YP_149675.1| hypothetical protein SPA0346 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62181088|ref|YP_217505.1| hypothetical protein SC2518 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161612721|ref|YP_001586686.1| hypothetical protein SPAB_00420 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167549459|ref|ZP_02343218.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167991829|ref|ZP_02572928.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168232088|ref|ZP_02657146.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238258|ref|ZP_02663316.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168243300|ref|ZP_02668232.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261441|ref|ZP_02683414.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168466729|ref|ZP_02700583.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194445044|ref|YP_002041779.1| hypothetical protein SNSL254_A2715 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451252|ref|YP_002046579.1| hypothetical protein SeHA_C2778 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194473001|ref|ZP_03078985.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735489|ref|YP_002115583.1| hypothetical protein SeSA_A2759 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197251319|ref|YP_002147474.1| hypothetical protein SeAg_B2672 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197265697|ref|ZP_03165771.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197361535|ref|YP_002141171.1| hypothetical protein SSPA0326 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243484|ref|YP_002216584.1| hypothetical protein SeD_A2889 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200387924|ref|ZP_03214536.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204929435|ref|ZP_03220509.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205353620|ref|YP_002227421.1| hypothetical protein SG2556 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207857929|ref|YP_002244580.1| hypothetical protein SEN2501 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213161950|ref|ZP_03347660.1| hypothetical protein Salmoneentericaenterica_18907 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213425333|ref|ZP_03358083.1| hypothetical protein SentesTyphi_06383 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581533|ref|ZP_03363359.1| hypothetical protein SentesTyph_10117 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213861386|ref|ZP_03385856.1| hypothetical protein SentesT_27905 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224582942|ref|YP_002636740.1| hypothetical protein SPC_1133 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912641|ref|ZP_04656478.1| hypothetical protein SentesTe_16122 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289825428|ref|ZP_06544665.1| hypothetical protein Salmonellentericaenterica_08533 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25323209|pir||AH0821 probable membrane protein STY2766 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16421065|gb|AAL21415.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16503736|emb|CAD02724.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136492|gb|AAO68058.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56126857|gb|AAV76363.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62128721|gb|AAX66424.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161362085|gb|ABX65853.1| hypothetical protein SPAB_00420 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403707|gb|ACF63929.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194409556|gb|ACF69775.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194459365|gb|EDX48204.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194710991|gb|ACF90212.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195630849|gb|EDX49441.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197093011|emb|CAR58444.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197215022|gb|ACH52419.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243952|gb|EDY26572.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288833|gb|EDY28206.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197938000|gb|ACH75333.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199605022|gb|EDZ03567.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204321154|gb|EDZ06354.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205273401|emb|CAR38376.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205325230|gb|EDZ13069.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205329907|gb|EDZ16671.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333593|gb|EDZ20357.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337701|gb|EDZ24465.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205349439|gb|EDZ36070.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206709732|emb|CAR34084.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467469|gb|ACN45299.1| hypothetical protein SPC_1133 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247717|emb|CBG25545.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994638|gb|ACY89523.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159070|emb|CBW18584.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913508|dbj|BAJ37482.1| hypothetical protein STMDT12_C25390 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321222778|gb|EFX47849.1| hypothetical protein SEE_04090 [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322715575|gb|EFZ07146.1| UPF0070 protein yfgM [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323130849|gb|ADX18279.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|326624340|gb|EGE30685.1| UPF0070 protein yfgM [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|326628720|gb|EGE35063.1| Putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332989448|gb|AEF08431.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 206
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E + A+ +++K D ++ EK +
Sbjct: 23 KALAVGVILGVGALVGWRYWSSHQTES-ARAASLAYQNAVTAVSADKPDSIPAA-EKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L++M +A V K + K A + ++ L+ A + +
Sbjct: 81 ENKNTYGALASMELAQQFVDKNELKKAEAQLQQGLAATS-DENLKAVINLRLARVQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G + A++ +E + SP
Sbjct: 140 QADAALKTLD--AVKGEGWTAIVADLRGEALLSKGDKKGARSAWEAGVNSDASPA 192
>gi|322613734|gb|EFY10673.1| hypothetical protein SEEM315_21653 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619523|gb|EFY16399.1| hypothetical protein SEEM971_02860 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625028|gb|EFY21857.1| hypothetical protein SEEM973_02612 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629529|gb|EFY26305.1| hypothetical protein SEEM974_03895 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634040|gb|EFY30777.1| hypothetical protein SEEM201_22080 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635522|gb|EFY32233.1| hypothetical protein SEEM202_06950 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639802|gb|EFY36481.1| hypothetical protein SEEM954_07743 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322648569|gb|EFY45018.1| hypothetical protein SEEM675_20865 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655211|gb|EFY51520.1| hypothetical protein SEEM965_04201 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658258|gb|EFY54524.1| hypothetical protein SEEM19N_02597 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664259|gb|EFY60456.1| hypothetical protein SEEM801_05276 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669426|gb|EFY65575.1| hypothetical protein SEEM507_17689 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322673153|gb|EFY69259.1| hypothetical protein SEEM877_16601 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676545|gb|EFY72613.1| hypothetical protein SEEM867_11678 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683295|gb|EFY79309.1| hypothetical protein SEEM180_08706 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685819|gb|EFY81812.1| hypothetical protein SEEM600_02542 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323194762|gb|EFZ79950.1| hypothetical protein SEEM581_11406 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199550|gb|EFZ84641.1| hypothetical protein SEEM501_17794 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204675|gb|EFZ89673.1| hypothetical protein SEEM460_01767 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208123|gb|EFZ93068.1| hypothetical protein SEEM020_00580 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210153|gb|EFZ95054.1| hypothetical protein SEEM6152_19905 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217021|gb|EGA01743.1| hypothetical protein SEEM0077_09954 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221819|gb|EGA06223.1| hypothetical protein SEEM0047_01578 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225002|gb|EGA09257.1| hypothetical protein SEEM0055_13382 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229291|gb|EGA13415.1| hypothetical protein SEEM0052_10668 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235394|gb|EGA19478.1| hypothetical protein SEEM3312_10711 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237420|gb|EGA21483.1| hypothetical protein SEEM5258_15794 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245174|gb|EGA29175.1| hypothetical protein SEEM1156_08080 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248877|gb|EGA32803.1| hypothetical protein SEEM9199_11063 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253164|gb|EGA36996.1| hypothetical protein SEEM8282_06350 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255398|gb|EGA39166.1| hypothetical protein SEEM8283_21542 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323263531|gb|EGA47058.1| hypothetical protein SEEM8284_00752 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266354|gb|EGA49842.1| hypothetical protein SEEM8285_17597 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
Length = 206
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E + A+ +++K D ++ EK +
Sbjct: 23 KALAVGVILGVGALVGWRYWSSHQTES-ARAASLAYQNAVTAVSADKPDSIPAA-EKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L++M +A V K + K A + ++ L+ A + +
Sbjct: 81 ENKNTYGALASMELAQQFVDKNELKKAEAQLQQGVAATS-DENLKAVINLRLARVQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G + A++ +E + SP
Sbjct: 140 QADAALKTLD--AVKGEGWTAIVADLRGEALLSKGDKKGARSAWEAGVNSDASPA 192
>gi|317049134|ref|YP_004116782.1| hypothetical protein Pat9b_2927 [Pantoea sp. At-9b]
gi|316950751|gb|ADU70226.1| Protein of unknown function DUF2133 [Pantoea sp. At-9b]
Length = 205
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 6/194 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
SN + + K +A +I+ I +L W + SHE + Q L
Sbjct: 5 SNENEQVDALRRFFANNG-KALAVGVIIGIAALGGWRFW--ASHEAGNDKAASAEYQKLT 61
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ S++N Y L+++ +A V A + D
Sbjct: 62 SAMQADKPQTLEAVASFASENNNTYGALASLDLAKQYVETNQLDKAIALLQSGLKDTK-D 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ L+ A I + + + L + +I G + L G Q A+
Sbjct: 121 ANLQAVINLRLARIQLQQNQADAALSTLNNVKGDG--WTAIVADIRGEALLSKGDKQGAR 178
Query: 183 TIFEELAKDNNSPF 196
+ + A+ SP
Sbjct: 179 DAWSKGAESQASPA 192
>gi|111223302|ref|YP_714096.1| putative serine/threonine-protein kinase [Frankia alni ACN14a]
gi|111150834|emb|CAJ62538.1| putative serine/threonine-protein kinase [Frankia alni ACN14a]
Length = 761
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 9/165 (5%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ G A + D AR + + ++D + + +L+ +GDT A
Sbjct: 506 ADSAGARLRLADLRTRLGEHDAARELLDAVAAEDPFAWRV--HWQRGLLLLTQGDTAGAV 563
Query: 110 EIFLKVANDDLAPLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
F +V P + A +AA + ++ L L ++ A L
Sbjct: 564 TAFERVY--GEVPGELAPKLALARAA----EAGGNLPRAQELYDLVSRTDDTFTSAAFGL 617
Query: 169 GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
L G A + + + + R +L + A+
Sbjct: 618 ARVRLAAGDRDGAAQAYRRVPAASAAHVEARVRLARVLGTVTAAG 662
>gi|168821505|ref|ZP_02833505.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205342006|gb|EDZ28770.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320087016|emb|CBY96785.1| UPF0070 protein 1057 [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 206
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E + A+ +++K D ++ EK +
Sbjct: 23 KALAVGVILGVGALVGWRYWSSHQTES-ARAASLAYQNAVTAVSADKPDSIPAA-EKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L++M +A V K + K A + ++ L+ A + +
Sbjct: 81 ENKNTYGALASMELAQQFVDKNELKKAEAQLQQGLAATS-DENLKAVINLRLARVQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G + A++ +E + SP
Sbjct: 140 QADAALKTLD--AVKGEGWTAIVADLRGEALLSKGDKKGARSAWEAGVNSDASPA 192
>gi|229196436|ref|ZP_04323183.1| TPR repeat-containing protein [Bacillus cereus m1293]
gi|228587073|gb|EEK45144.1| TPR repeat-containing protein [Bacillus cereus m1293]
Length = 891
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 71/184 (38%), Gaps = 11/184 (5%)
Query: 14 CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
K K K I + +++ + + + K E QA + K ++A
Sbjct: 497 SKWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQAYDDKKYTKAEEAV 556
Query: 74 SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
+ +D + + +A+I VA+G K A + K+ D AA L A
Sbjct: 557 GQAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLA 610
Query: 134 ASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
++ Y+E + ++ ++ P + A L +S +K + +KA+ + +++
Sbjct: 611 SA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMKEFEKAEDVIVKMS 669
Query: 190 KDNN 193
N
Sbjct: 670 TKTN 673
>gi|149190088|ref|ZP_01868365.1| hypothetical protein VSAK1_12050 [Vibrio shilonii AK1]
gi|148836118|gb|EDL53078.1| hypothetical protein VSAK1_12050 [Vibrio shilonii AK1]
Length = 204
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 64/161 (39%), Gaps = 3/161 (1%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + S + E + +A+E + D + I + Y+ L+++ +A +
Sbjct: 39 WRYYQDSVTSAQEAASEQYTKAVEAIAAKGTDASGDVQAFIDGSKDTEYSVLASLQLAKV 98
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V G+ + A E + A A+ T + A ++ +T + + L K+++
Sbjct: 99 QVEAGELEKALEQL-QWAQSKTKDAAITPLVTYRIARLMAETGNVDGARAELAKITDD-- 155
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
E+ G A++ G A T + E + ++ G+
Sbjct: 156 AWAGRVAELRGDIAIRDGDRDAAYTAYTEAQQAQDASQGLQ 196
>gi|15892236|ref|NP_359950.1| hypothetical protein RC0313 [Rickettsia conorii str. Malish 7]
gi|15619373|gb|AAL02851.1| unknown [Rickettsia conorii str. Malish 7]
Length = 220
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 48 KKKNIVGENFAQALELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
K G+ + + L + ++ A ++ E +++ N ++ + +I ++K
Sbjct: 51 KNNQKNGDILVKTVGLETTKDNEELAFNTLEHLVTTSNTKIKEIAALEQVAIKISKKKYS 110
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDT-----SSYEEISKILQKLSEPSNPMH 161
A ++ K+ + A + S+++D E+++K L + P
Sbjct: 111 EAKDLLNKIIENKEYSEISTSYARISWCSLVIDDHNLDIQDKEKLTKYLNYFDDEKKPFW 170
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
A I + +K +A+ + L NN I +++ +L N+
Sbjct: 171 ATATIIKAMWDIKNNMKPQAEKNLKNLLISNNVSDLIKDQAKALLVNLN 219
>gi|238785323|ref|ZP_04629312.1| hypothetical protein yberc0001_29830 [Yersinia bercovieri ATCC
43970]
gi|238713776|gb|EEQ05799.1| hypothetical protein yberc0001_29830 [Yersinia bercovieri ATCC
43970]
Length = 206
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + ++N D + EK +
Sbjct: 23 KALAVGVVLGIAALVGWRYWQSHQN-SAMTEASTAYQQASDALSAN-SADGVALAEKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V + + AA+ + + L+ A + +
Sbjct: 81 GNKNNYGVLAGLELAHHFVEQNEFDKAAQQLTQALGQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+E K L + A ++ G + L G + A+ + + ++N+ +
Sbjct: 140 KPDEALKTLDAVQGDG--WTAMAQDVRGDALLSKGDISGARAAYSK-GVESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|90021083|ref|YP_526910.1| hypothetical protein Sde_1436 [Saccharophagus degradans 2-40]
gi|89950683|gb|ABD80698.1| conserved hypothetical protein [Saccharophagus degradans 2-40]
Length = 238
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 13/176 (7%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK--------LDDA 72
+ I ++++I+ A W Y D E + F LE + + DA
Sbjct: 22 WASIVLPVVILIVGYAGWSYWGDYK-EARAQEGSAAFQVLLEKVEAQPGQKLSADAITDA 80
Query: 73 RSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATL 131
+ + I S+ + Y +SN+ +A + V G A V A +V A
Sbjct: 81 QLEAQSIASEFSGSLYADMSNLLLARLAVESGKLDEAEAALNAVIA-SPANESVVGLAKA 139
Query: 132 QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ A + Y E S ++ S EI G AL G + A T + E
Sbjct: 140 RLAKVYAAQGKYAEASTLVG--STEQEAYKALYAEIRGDIALAQGDLPTAHTAYNE 193
>gi|332992291|gb|AEF02346.1| putative membrane-associated protein with TPR-like domain
[Alteromonas sp. SN2]
Length = 206
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 7/180 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+ D K + I L + L W Y D K + A+E
Sbjct: 5 ATEDQQVEAIKRFWKEHGTAIIVGAA-LGLGGLWGWRYYSDTQMATK-EAASVEYQNAVE 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ D ++F I + ++ Y ++++ A V GD AA +V
Sbjct: 63 TYGEEGSADKITAF--INANEDSGYASVASLLAAKQAVDAGDFDAAASHLNRVV-TFAEN 119
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ A ++ + ++ + + L ++ +E+ G + K A+
Sbjct: 120 EELKALAAIRLTRVQIEMNQLDAALSTLGNITNE--AFAAEVSELKGDVYQQQSKFDDAR 177
>gi|34580744|ref|ZP_00142224.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262129|gb|EAA25633.1| unknown [Rickettsia sibirica 246]
Length = 220
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 48 KKKNIVGENFAQALELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
K G+ + + L + ++ A ++ E +++ N ++ + +I ++K
Sbjct: 51 KNNQKNGDILVKTVGLETTKDNEELAFNTLENLVTTSNTKIQEIAALEQVAIKISKKKYS 110
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDT-----SSYEEISKILQKLSEPSNPMH 161
A ++ KV + A + S+++D E+++K L + P
Sbjct: 111 EAKDLLNKVIENKEYSEISTSYARISWCSLVIDDHNLDIQDKEKLTKYLNYFDDEKKPFW 170
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
A I + +K +A+ + L NN I +++ +L N+
Sbjct: 171 ATATIIKAMWDIKNNMKPQAEKNLKNLLISNNVSDLIKDQAKALLVNLN 219
>gi|307245519|ref|ZP_07527606.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306853578|gb|EFM85796.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 718
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 67/172 (38%), Gaps = 10/172 (5%)
Query: 44 GSHEKKKNIVGENFAQA-----LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ E + +A + L K+D+A + + + + ++ + +
Sbjct: 170 AYRNVNREDSAEAYVRAQLNVGITLEKKGKVDEAIVVYRNVTREGSAEQYAIAQVNLGIA 229
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
L +G A + V +D A + VR A + L + ++E +S +
Sbjct: 230 LGKQGKVDEAIVAYRNVNREDSAEVYVR--AQINLGITLGEQGKFDEAIAAFNNVSREDS 287
Query: 159 P-MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
++ A LGI+ K G+ +A + + +++++ + + Q +L I
Sbjct: 288 TELYAIAQVNLGITLRKQGRGDEAIVAYRNVNREDSA--KLYVKVQFLLGLI 337
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 5/161 (3%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+ K + L K+D+A ++ + +D+ + + I L +G
Sbjct: 32 QEDDVKQYARAQLNIGIILGKQGKVDEAIVAYRNVNREDSVESYARAQLNIGITLGEQGK 91
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQF 163
A + V +D A + A L IL + + EI E S +
Sbjct: 92 VDEALVAYRNVNREDSAEQYAK--AQLNIGIILGEQGKIDEEIEAYYNVTREDSAEQYAI 149
Query: 164 ANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
A LGI+ K GKV +A + + +++++ + R+Q+
Sbjct: 150 AQVNLGIALGKQGKVDQALVAYRNVNREDSAEAYV--RAQL 188
Score = 43.4 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 64/175 (36%), Gaps = 10/175 (5%)
Query: 49 KKNIVGENFAQA-----LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ E +A A + L K+D+A ++ + +D+ + + + L +G
Sbjct: 211 TREGSAEQYAIAQVNLGIALGKQGKVDEAIVAYRNVNREDSAEVYVRAQINLGITLGEQG 270
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE-ISKILQKLSEPSNPMHQ 162
A F V+ +D + A + L +E I E S ++
Sbjct: 271 KFDEAIAAFNNVSREDS--TELYAIAQVNLGITLRKQGRGDEAIVAYRNVNREDSAKLYV 328
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+LG+ K+ +A+ F + ++ + T++Q+ L + + +
Sbjct: 329 KVQFLLGLIFESQDKLDEARDAFNNIRLSDSV--ELYTKAQVYLKVLNIGKKEIR 381
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 59/160 (36%), Gaps = 3/160 (1%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
AI Y + ++ + L K+D+A ++ + +D+ + + I
Sbjct: 59 AIVAYRNVNREDSVESYARAQLNIGITLGEQGKVDEALVAYRNVNREDSAEQYAKAQLNI 118
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE-ISKILQKLS 154
IL +G E + V +D A A + L ++ +
Sbjct: 119 GIILGEQGKIDEEIEAYYNVTREDSAEQY--AIAQVNLGIALGKQGKVDQALVAYRNVNR 176
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
E S + A +GI+ K GKV +A ++ + ++ ++
Sbjct: 177 EDSAEAYVRAQLNVGITLEKKGKVDEAIVVYRNVTREGSA 216
>gi|170718898|ref|YP_001784069.1| hypothetical protein HSM_0731 [Haemophilus somnus 2336]
gi|168827027|gb|ACA32398.1| conserved hypothetical protein [Haemophilus somnus 2336]
Length = 203
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 66/188 (35%), Gaps = 10/188 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + N K K YK I +++L + W Y D KK + + +
Sbjct: 5 IEEEQELNELKT---WWKENYKSIIVIVLLAFSGVFGWRYWQDYQTTKK-QTLSAQYDEL 60
Query: 61 LELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
+ + + +A ++ + Y + + A + V++ + A E + A +
Sbjct: 61 ISSAENQSIYNA--QLDRFVQENGETTYAVFALLDKAKLEVSQQNFVQAEETLKQ-AIVN 117
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+ + ++ A++ ++E L + + G L G +
Sbjct: 118 TSDDILMSITAIRLATVQYQLQKFDEALASLNQ--VKGQSWDVSKLLLSGDIQLAKGNKE 175
Query: 180 KAKTIFEE 187
AK FE+
Sbjct: 176 IAKDNFEQ 183
>gi|262371082|ref|ZP_06064404.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262313968|gb|EEY95013.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 232
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 6/177 (3%)
Query: 13 KCKMGKCCYKWIAPLLILMILSLAIWFYLFDGS-HEKKKNIVGENFAQALELFNSNKLDD 71
K K I+ +LI +I + W Y + E + N
Sbjct: 14 KSFTKKYGSAIISGILIALI-AFFGWQYWQKKTLAENQMNTAKVQQLMDEARATQGDAFT 72
Query: 72 ARSS-FEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
A S+ +KI+ + + + + +A + K D +A + KV N + +
Sbjct: 73 ALSATADKIVKEAPDSAQAIQTQLLMAKLAYDKADYASAEKALKKVENSKVDDDGLVQIV 132
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
L+ A + +++ K L + +P A+E LG + ++ AK ++
Sbjct: 133 KLRLAYAQLAQKKFDDAIKNLALVKDP--AFKATADEALGDVYVAKNDIENAKKAYQ 187
>gi|229846457|ref|ZP_04466565.1| hypothetical protein CGSHi7P49H1_07290 [Haemophilus influenzae
7P49H1]
gi|229810550|gb|EEP46268.1| hypothetical protein CGSHi7P49H1_07290 [Haemophilus influenzae
7P49H1]
Length = 204
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQAHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVKQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|261340817|ref|ZP_05968675.1| putative inner membrane protein [Enterobacter cancerogenus ATCC
35316]
gi|288317243|gb|EFC56181.1| putative inner membrane protein [Enterobacter cancerogenus ATCC
35316]
Length = 206
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 62/175 (35%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K + +IL + +L W Y + + + +++ ++ EK ++
Sbjct: 23 KALVVGVILGVGALMGWRYWNSHQADS-ARGASLAYENTVSDIRADQPQT-LAAAEKFVA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V K + AA + + ++ L+ A I V
Sbjct: 81 DNKNTYGALAALEVAQQYVDKNELDKAAAQLSQSLA-AASDENLKAVINLRLARIQVQQK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
++ K L + ++ G + L G + A+ ++ + SP
Sbjct: 140 KADDALKTLDTIKGEG--FAAIVADLRGEALLSKGDKEGARKAWQAGVESKASPA 192
>gi|32455225|gb|AAP83327.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Enteritidis]
Length = 206
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 67/175 (38%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E + A+ +++K D ++ EK +
Sbjct: 23 KALAVGVILGVGALVGWRYWSSHQTES-ARAASLAYQNAVTAVSADKPDSIPAA-EKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L++M +A V K + K A + + ++ L+ A + +
Sbjct: 81 ENKNTYGALASMELAQQFVDKNELKKAEAQLQQ-GLVATSDENLKAVINLRLARVQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G + A++ +E + SP
Sbjct: 140 QADAALKTLD--AVKGEGWTAIVADLRGEALLSKGDKKGARSAWEAGVNSDASPA 192
>gi|33602150|ref|NP_889710.1| hypothetical protein BB3174 [Bordetella bronchiseptica RB50]
gi|33576588|emb|CAE33666.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 212
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 8/204 (3%)
Query: 12 GKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFAQALELFNSNKL 69
+ + I L L++L+ W + + +G E A L ++
Sbjct: 14 IRAWWARYGTL-ILTLATLVVLAWGGWSGWKAYQNYRANQAMGYFEALEDAARLGGADAA 72
Query: 70 DDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+++ + + Y + A L ++ D A E +A P A++
Sbjct: 73 TRIKAAAATLRTDYPATGYAGRGALIAAQALQSQQDVDGAREQLEWLAAQAKQP-ALQPV 131
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+ A IL+D Y+ L +L+ P + G GK +A+ ++
Sbjct: 132 ARLRLAGILLDQKQYD---AALAQLNNPPASFAALFADRRGDVLAAQGKRDEARAAWQSA 188
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+ ++ Q+ L + +
Sbjct: 189 IDGLGTSNPLTQVVQLKLDALSGA 212
>gi|145628726|ref|ZP_01784526.1| hypothetical protein CGSHi22121_06910 [Haemophilus influenzae
22.1-21]
gi|319775763|ref|YP_004138251.1| hypothetical protein HICON_11070 [Haemophilus influenzae F3047]
gi|144979196|gb|EDJ88882.1| hypothetical protein CGSHi22121_06910 [Haemophilus influenzae
22.1-21]
gi|317450354|emb|CBY86570.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 204
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQAHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|67459384|ref|YP_247008.1| hypothetical protein RF_0992 [Rickettsia felis URRWXCal2]
gi|67004917|gb|AAY61843.1| unknown [Rickettsia felis URRWXCal2]
Length = 220
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 48 KKKNIVGENFAQALELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
K G+ + + L + ++ A ++ E +++ N ++ + +I +++
Sbjct: 51 KNNQKNGDILVKTVGLEATKDNEELAFNTLENLVTTSNTKIKEIAALEQVAIKISEKKYS 110
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-----EISKILQKLSEPSNPMH 161
A ++ K+ + A + +++D + + +++K L + P
Sbjct: 111 EAKDLLNKIIENKEYSEISTSYARISWCGLVIDDQNLDIQDKEKLTKYLNYFDDEKKPFW 170
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
A I + +K +A+ + L NN I +++ +L N+
Sbjct: 171 ATATIIKAMWDIKNNMKPQAEKNLKNLLISNNVSDLIKDQAKALLVNLN 219
>gi|308271574|emb|CBX28182.1| hypothetical protein N47_G35060 [uncultured Desulfobacterium sp.]
Length = 490
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 17/133 (12%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-A 121
L ++ F++ ++ K Y +S A +L GD +A F K ++
Sbjct: 293 LAMYGNKENVLKMFKEDVTDKPKDY--MSQYKYALVLSESGDRSDAIAYFKKALEENPFD 350
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEILGISALKF--GK 177
P +R + Y E K L+ P +P +L + +K GK
Sbjct: 351 PDILRDLGKV-----YFQDGQYPEAQKTLEGAVSLAPDDP-----ETLLFLGRIKAETGK 400
Query: 178 VQKAKTIFEELAK 190
A+ +F + +
Sbjct: 401 FNDARKLFLTITE 413
Score = 41.5 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 9/139 (6%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-K 114
+ AL L S DA + F+K L ++ + L ++ + G A +
Sbjct: 320 QYKYALVLSESGDRSDAIAYFKKALEENPFDPDILRDL--GKVYFQDGQYPEAQKTLEGA 377
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
V+ P + + ++A +T + + K+ ++ P ++ A +LG + K
Sbjct: 378 VSLAPDDPETLLFLGRIKA-----ETGKFNDARKLFLTIT-EKYPYYKRALYLLGETCGK 431
Query: 175 FGKVQKAKTIFEELAKDNN 193
+ A KD
Sbjct: 432 MNNMADAHYYLGLFYKDKE 450
>gi|30248177|ref|NP_840247.1| hypothetical protein NE0151 [Nitrosomonas europaea ATCC 19718]
gi|30180062|emb|CAD84062.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length = 214
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 5/184 (2%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL- 86
I + + L++ ++ + +A + + +L++
Sbjct: 29 AIAVFAATVAGNRLWNHYKAEQAQQAADLYAVLQQQVEKGSELVKITDAAHLLTEGFPGS 88
Query: 87 -YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
Y + + A G+ + A L+ A D ++ A L+ AS+LVD S Y++
Sbjct: 89 GYASRAALIAARAAGQAGNDQVA-RDMLQWALDHAEEPEIKDMARLRLASVLVDESKYDQ 147
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
K+L ++ + ++ G + GK +A+ +++ N+ QM
Sbjct: 148 ALKLLD--AQHAASFTGLYADLRGDALAAAGKTDEARAAYQKALDSLNAQGAYRNVVQMK 205
Query: 206 LANI 209
L +
Sbjct: 206 LDVL 209
>gi|87118475|ref|ZP_01074374.1| hypothetical protein MED121_15649 [Marinomonas sp. MED121]
gi|86166109|gb|EAQ67375.1| hypothetical protein MED121_15649 [Marinomonas sp. MED121]
Length = 213
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 71/190 (37%), Gaps = 11/190 (5%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENF-------A 58
+ + + + + K +K L+L + ++ F + ++N + E
Sbjct: 3 ELKTEEEQIEAFKTWWKKNGTSLVLAVSLGVAGYFGFQAWQQNQENHLAEASSLFESMSQ 62
Query: 59 QALELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
A +L L +++++ D+ Y +++ A + V D A + A
Sbjct: 63 AATDLSQDENLKTVSFIADQLVNDFDDTGYATFAHLLQAKVDVIGEDYDAAIARLNE-AK 121
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
+ + ++ + L+ + +LV ++ L +S E+ G L GK
Sbjct: 122 ESTDDVTLKAISDLRISKVLVHQGELDKALTQLANIS--LTEFDSLKLELKGDVLLAQGK 179
Query: 178 VQKAKTIFEE 187
++A+ ++
Sbjct: 180 EKEARDAYQA 189
>gi|295132712|ref|YP_003583388.1| tetratricopeptide repeat protein [Zunongwangia profunda SM-A87]
gi|294980727|gb|ADF51192.1| tetratricopeptide repeat protein [Zunongwangia profunda SM-A87]
Length = 1007
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 69/176 (39%), Gaps = 7/176 (3%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL-SNMY 94
A W D ++ + A + +N A+S+FEK L + + +N Y
Sbjct: 705 AGWVKNIDFVEVSDADLDNTTYEAAENQYLANNTSQAKSNFEKYLKSFPNGIHAINANFY 764
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE---ISKILQ 151
+A + GD + + + V + A L + + S Y+E + + L+
Sbjct: 765 LAQLQYRDGDKEGSVPHYKYVIAKPNNEFTEQALARLSQIYL--EKSQYQEALPLLQRLE 822
Query: 152 KLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+++ + +A L S + + +A +++ + + T +Q+I+A
Sbjct: 823 QVAGDTQN-KIYAQSNLMKSYDEMNQPGQAAAYADKVLANPEADKQARTDAQLIVA 877
>gi|303252415|ref|ZP_07338581.1| hypothetical protein APP2_1391 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302648874|gb|EFL79064.1| hypothetical protein APP2_1391 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 718
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 61/157 (38%), Gaps = 8/157 (5%)
Query: 44 GSHEKKKNIVGENFAQA-----LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ E + +A + L K+D+A + + + + ++ + +
Sbjct: 170 AYRNVNREDSAEAYVRAQLNVGITLEKKGKVDEAIVVYRNVTREGSAEQYAIAQVNLGIA 229
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
L +G A + V +D A + VR A + L + ++E +S +
Sbjct: 230 LGKQGKVDEAIVAYRNVNREDSAEVYVR--AQINLGITLGEQGKFDEAIAAFNNVSREDS 287
Query: 159 P-MHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
++ A LGI+ K G+ +A + + +++++
Sbjct: 288 TELYAIAQVNLGITLRKQGRGDEAIVAYRNVNREDSA 324
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 5/161 (3%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+ K + L K+D+A ++ + +D+ + + I L +G
Sbjct: 32 QEDDVKQYARAQLNIGIILGKQGKVDEAIVAYRNVNREDSVESYARAQLNIGITLGEQGK 91
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQF 163
A + V +D A + A L IL + + EI E S +
Sbjct: 92 VDEALVAYRNVNREDSAEQYAK--AQLNIGIILGEQGKIDEEIEAYYNVTREDSAEQYAI 149
Query: 164 ANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
A LGI+ K GKV +A + + +++++ + R+Q+
Sbjct: 150 AQVNLGIALGKQGKVDQALVAYRNVNREDSAEAYV--RAQL 188
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 59/160 (36%), Gaps = 3/160 (1%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
AI Y + ++ + L K+D+A ++ + +D+ + + I
Sbjct: 59 AIVAYRNVNREDSVESYARAQLNIGITLGEQGKVDEALVAYRNVNREDSAEQYAKAQLNI 118
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE-ISKILQKLS 154
IL +G E + V +D A A + L ++ +
Sbjct: 119 GIILGEQGKIDEEIEAYYNVTREDSAEQY--AIAQVNLGIALGKQGKVDQALVAYRNVNR 176
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
E S + A +GI+ K GKV +A ++ + ++ ++
Sbjct: 177 EDSAEAYVRAQLNVGITLEKKGKVDEAIVVYRNVTREGSA 216
>gi|330859277|emb|CBX69627.1| UPF0070 protein yfgM [Yersinia enterocolitica W22703]
Length = 125
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + ++N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSHQNTVLTEASS-AYQQASDALSAN-SADGVAVAEKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ Y L+ + +A V + + AA+ + +
Sbjct: 81 SNKNNYGVLAGLELAHHFVEQNEFDKAAQQLTQALSQTK 119
>gi|241764497|ref|ZP_04762518.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
gi|241366081|gb|EER60678.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
Length = 240
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 42/133 (31%), Gaps = 2/133 (1%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI- 79
+ + +++++ + + ++ F + +F +
Sbjct: 38 WGTLISTVVVLVFGSVAVWNGYQYWQNRQAIQASALFDAVDVAARAGDQGRMEQAFADLR 97
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ + +A ++ G+ K A E VA + A L+ +S+L+D
Sbjct: 98 SKYAGTTQAAQAGLTLAKSMLDAGNAKGAKEALTWVAEKAGDD-GYKALARLRLSSVLMD 156
Query: 140 TSSYEEISKILQK 152
+E +
Sbjct: 157 QKELDEALAQVSG 169
>gi|17545936|ref|NP_519338.1| hypothetical protein RSc1217 [Ralstonia solanacearum GMI1000]
gi|17428231|emb|CAD14919.1| putative transmembrane protein [Ralstonia solanacearum GMI1000]
gi|299067268|emb|CBJ38465.1| conserved protein of unknown function [Ralstonia solanacearum
CMR15]
Length = 211
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 74/189 (39%), Gaps = 8/189 (4%)
Query: 27 LLILMILSLAIWFYL--FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
++I+++L+LA WF + + +++ E +A++ ++ K+ A + E
Sbjct: 28 IVIVVLLALAGWFGWKNWQRKQAGEASVLYEQVQKAVDAKDAEKIKRAAADMED--KFGR 85
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y + + A L D A + L+ D + A L+ A +L+D +Y+
Sbjct: 86 TAYAQMGALSAAKALYEANDAAGA-KAQLQWTIDHAGDDEYKAVAKLRLAGLLLDEKAYD 144
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE-ELAKDNNSPFGISTRSQ 203
+ ++ P+ ++A K +A+T ++ L K + Q
Sbjct: 145 QGLALVSGDVAPAFAALYADRRGDLLAA--QNKKDEARTAYKLALEKFGQADASARQIVQ 202
Query: 204 MILANIIAS 212
L + +
Sbjct: 203 FKLDALGGA 211
>gi|33597410|ref|NP_885053.1| hypothetical protein BPP2853 [Bordetella parapertussis 12822]
gi|33573837|emb|CAE38145.1| putative membrane protein [Bordetella parapertussis]
Length = 212
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 8/204 (3%)
Query: 12 GKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFAQALELFNSNKL 69
+ + I L L++L+ W + + +G E A L ++
Sbjct: 14 IRAWWARYGTL-ILTLATLVVLAWGGWSGWKAYQNYRANQAMGYFEALEDAARLGGADAA 72
Query: 70 DDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+++ + + Y + A L ++ D A E +A P A++
Sbjct: 73 TRIKAAAATLRTDYPATGYAGRGALIAAQALQSQQDVDGAREQLEWLAAQAKQP-ALQPV 131
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+ A IL+D Y+ L +L+ P + G GK A+ ++
Sbjct: 132 ARLRLAGILLDQKQYD---AALAQLNNPPASFAALFADRRGDVLAAQGKRDDARAAWQSA 188
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+ ++ Q+ L + +
Sbjct: 189 IDGLGTSNPLTQVVQLKLDALSGA 212
>gi|329297580|ref|ZP_08254916.1| hypothetical protein Pstas_15361 [Plautia stali symbiont]
Length = 205
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 62/194 (31%), Gaps = 6/194 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
SN + + K +A +I+ I +L W + E + Q
Sbjct: 5 SNENEQVDALRRFFANNG-KALAVAVIVGIAALGGWRFWSSH-QEGADKAASAQYQQLTS 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+K + S++N Y L+ + +A VA A + D
Sbjct: 63 AMQVDKPQT-LEAVASFASENNNTYGALAALDLAKQYVAANQLDKAITLLQSGLTDTK-D 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ L+ A I + + + L + +I G + L G Q A+
Sbjct: 121 ANLQAVINLRLARIQLQQNQADAALTTLNNVKGDG--WTAIVADIRGEALLSKGDKQGAR 178
Query: 183 TIFEELAKDNNSPF 196
+ + A+ SP
Sbjct: 179 DAWSKGAESQASPA 192
>gi|54294414|ref|YP_126829.1| hypothetical protein lpl1483 [Legionella pneumophila str. Lens]
gi|53754246|emb|CAH15723.1| hypothetical protein lpl1483 [Legionella pneumophila str. Lens]
Length = 224
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 67/178 (37%), Gaps = 6/178 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ K + Y + + + ++L + + + ++K K + + F
Sbjct: 7 EEEQLEIIKKWWKR--YGNMITIFLSIVLLIIAGYRYMNWHNDKIKQQASIAYENMMIAF 64
Query: 65 NSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ + RS +++ ++ +Y +++M +A I V+K + A VA +
Sbjct: 65 SNQNIKSVRSYANELIKNYNHTVYADIAHMTLAKIYVSKNKLEQARNELKAVAA-ESQMT 123
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A ++ A +L +Y L + NE+ G G+ Q A
Sbjct: 124 PLRQIAKIRIARLLAADKAYTNALNELS--TVEDEAYLPVINELKGDIYSAKGQYQDA 179
>gi|153001516|ref|YP_001367197.1| hypothetical protein Shew185_3003 [Shewanella baltica OS185]
gi|151366134|gb|ABS09134.1| conserved hypothetical protein [Shewanella baltica OS185]
Length = 206
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 7/190 (3%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN 67
++ + + K +K + + Y ++ + K E ++A +N
Sbjct: 5 STEEQQVDAIKQFWKDYGTSIFIGAFVGLGGLYAWNYYSDVKVAQAEEA-SKAFHQLTTN 63
Query: 68 KLDDA--RSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
D+ + + D K Y L + +A V D A E KV
Sbjct: 64 SADETAMLAGVAEFSKSHDQKGYQALLELIVAKTAVEAKDYPKAIEALNKVIAAKP-GAG 122
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ ATL+ A I + + L++++ +E+ G ++ G+V+KAKT
Sbjct: 123 LDVIATLRVARIQAEQGQIDAALATLEQVT--DKAFFAQRDELKGDFLVRQGEVEKAKTA 180
Query: 185 FEELAKDNNS 194
++ +
Sbjct: 181 YQAAMDNGGV 190
>gi|324326239|gb|ADY21499.1| TPR domain protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 891
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 71/184 (38%), Gaps = 11/184 (5%)
Query: 14 CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
K K I + +++ + + + K E QA + K ++A
Sbjct: 497 STWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQAYDDKKYTKAEEAV 556
Query: 74 SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
+ S+D + + +A+I VA+G K A + K+ D AA L A
Sbjct: 557 GQAIAVKSKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLA 610
Query: 134 ASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
++ Y+E + ++ ++ P + A L +S +K + +KA+ + +++
Sbjct: 611 SA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMKEFEKAEDVIVKMS 669
Query: 190 KDNN 193
N
Sbjct: 670 TKTN 673
>gi|229017513|ref|ZP_04174414.1| TPR repeat-containing protein [Bacillus cereus AH1273]
gi|229023732|ref|ZP_04180221.1| TPR repeat-containing protein [Bacillus cereus AH1272]
gi|228737529|gb|EEL88036.1| TPR repeat-containing protein [Bacillus cereus AH1272]
gi|228743837|gb|EEL93938.1| TPR repeat-containing protein [Bacillus cereus AH1273]
Length = 891
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 71/184 (38%), Gaps = 11/184 (5%)
Query: 14 CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
K K K I + +++ + + + K E QA + K ++A
Sbjct: 497 SKWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQAYDDKKYTKAEEAV 556
Query: 74 SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
+ +D + + +A+I VA+G K A + K+ D AA L A
Sbjct: 557 GHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLA 610
Query: 134 ASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
++ Y+E + ++ ++ P + A L +S +K + +KA+ + +++
Sbjct: 611 SA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMEEFEKAEDVIVKMS 669
Query: 190 KDNN 193
N
Sbjct: 670 TKTN 673
>gi|213649665|ref|ZP_03379718.1| hypothetical protein SentesTy_21640 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 202
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E + A+ +++K D ++ EK +
Sbjct: 23 KALAVGVILGVGALVGWRYWSSHQTES-ARAASLAYQNAVTAVSADKPDSIPAA-EKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L++M +A V K + K A + ++ L+ A + +
Sbjct: 81 ENKNTYGALASMELAQQFVDKNELKKAEAQLQQGLAATS-DENLKAVINLRLARVQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G + A++ +E + SP
Sbjct: 140 QADAALKTLD--AVKGEGWTAIVADLRGEALLSKGDKKGARSAWEAGVNSDASPA 192
>gi|223939519|ref|ZP_03631395.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
gi|223891791|gb|EEF58276.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
Length = 254
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 4/171 (2%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L I +I ++ E K + + ++ K+ ++
Sbjct: 29 VLAIAVIGGGIAFYVANKNRQEVKAGEALSELRPSRATPGTQAPSVPPDAYLKVANEHPG 88
Query: 86 -LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
+ + L G K A F + + A+ A + A+ L
Sbjct: 89 TSAGGQALLLAGGALFEAGKFKEAQAQFDRFLGEHG-DSALASQARIGVAASLEAQGEDA 147
Query: 145 EISKILQKL--SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
+ + Q L S+P++ + A L K GK A +++EL K N
Sbjct: 148 QAAAKYQALISSQPNDSVIPQAKSALARLYEKQGKYADALRLYQELTKQGN 198
>gi|146312648|ref|YP_001177722.1| hypothetical protein Ent638_3007 [Enterobacter sp. 638]
gi|145319524|gb|ABP61671.1| conserved hypothetical protein [Enterobacter sp. 638]
Length = 206
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 6/196 (3%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M N + K + K +A +IL + +L W Y + ++
Sbjct: 3 MYENENDQVDAVKRFFAENG-KALAVGVILGVGALMGWRYWNSHQADS-ARGASLSYENT 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ +++ ++ EK + + +Y L+++ +A V K + AA + +
Sbjct: 61 VSAIRADQPQT-LAAAEKFAADNKNIYGALASLEVAQQFVDKNELDKAAAQLQQGLSATS 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
++ L+ A I V ++ K L + ++ G + L G Q
Sbjct: 120 DDN-LKAVINLRLARIQVQQKKADDALKTLDTIKGEG--FAAIVADLRGEALLSKGDKQG 176
Query: 181 AKTIFEELAKDNNSPF 196
A++ +E K N SP
Sbjct: 177 ARSAWESGVKSNASPA 192
>gi|119897220|ref|YP_932433.1| hypothetical protein azo0929 [Azoarcus sp. BH72]
gi|119669633|emb|CAL93546.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 214
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 67/178 (37%), Gaps = 8/178 (4%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIAS 97
+ + ++ G + + AR +++ Q +Y L + A
Sbjct: 40 WQGWRWYQNRQAAEAGGLYFAVQQAVTQQDAQKARELTGRLIDQFGGTVYAQLGALVSAG 99
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
+ +KGD NA A ++R A L+ A++L+ ++++ LQ+ EP
Sbjct: 100 LQFSKGDLDNARAPLEWAAGQGK-DESLRDLARLRLAAVLLQQGAHDQALAQLQR--EPG 156
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFE----ELAKDNNSPFGISTRSQMILANIIA 211
++ G + GK A+T ++ L + + + ++ L ++ A
Sbjct: 157 KAYRARFADLRGDALAAQGKAADARTAYQAAITALEAEGDEAAMLREVVRVKLESLEA 214
>gi|119357636|ref|YP_912280.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3560
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
N +AL+L +LD+A + + +ILS + ++ L A+I + D++ A
Sbjct: 2901 NEESVKLQRALKLHQEGRLDEAEALYREILSSSPEHFDAL--RLSATIAAQRHDSEKALA 2958
Query: 111 IFLKVAN 117
+F +
Sbjct: 2959 LFDQALA 2965
Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
N +AL+ +LD+A + + +ILS + ++ L A+I + + +
Sbjct: 10 GSTNEESVKLQRALKFHQEGRLDEAEALYREILSSSPEHFDAL--QLSATIAAQRHEFEK 67
Query: 108 AAEIFLKV 115
A +F +V
Sbjct: 68 AVTLFDQV 75
Score = 41.5 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 19/130 (14%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+AL+L +LD+A + + +ILS + ++ L A+I + D++ A +F +
Sbjct: 1479 KLQRALKLHQEGRLDEAEALYREILSFSPEHFDAL--QLSATIAAQRHDSEKALVLFDQA 1536
Query: 116 ANDDLA--------PLAVRYAATLQAASILVDTSSYEEISKI----LQKLSEPSNPMHQF 163
+A++ A SYE + ++ S N + +
Sbjct: 1537 LAIKPDHARSLNNRGIALQELKRYDEAL-----ESYERAIAVKPDFIEPYSNRGNTLQEL 1591
Query: 164 ANEILGISAL 173
++
Sbjct: 1592 KRYEEALACY 1601
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+AL+L +LD+A +IL + L A+I + + ++ A +F +
Sbjct: 800 KLQRALKLHQEGRLDEAELFCTEILRFKPGYFEVL--QLSATIALQRKASEKAVALFDQA 857
Query: 116 AN 117
Sbjct: 858 LA 859
Score = 35.0 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 22/145 (15%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+AL+L +LD+A +++ILS L + AS+ + +A +F +
Sbjct: 2227 KLQRALKLHQEGRLDEAEVIYQEILSIQPLHIEALQFL--ASMATRRKKYTDAVSLFERA 2284
Query: 116 AN-DDLAPL-------AVRYAATLQAASILVDTSSYEEIS----KILQKLSEPSNPMHQF 163
D P+ A+ + A +SYE+ ++ S N
Sbjct: 2285 LEIDPDHPVSWCTLGIALHELGRYEEAL-----ASYEKAIVLYPGFVEVYSNRGNTFLIL 2339
Query: 164 ANEILGISALK---FGKVQKAKTIF 185
+S+ + + + F
Sbjct: 2340 KRYQEALSSYEKALAINPEYTRAYF 2364
>gi|241761936|ref|ZP_04760021.1| cellulose synthase operon C domain protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|241373616|gb|EER63188.1| cellulose synthase operon C domain protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 1334
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 20/169 (11%)
Query: 40 YLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
+ ++ F +A +N+LD A+S E++ +Q +SN +A I
Sbjct: 203 EGYHWANALSSARFYGRFEEAQAASRANQLDKAQSILEQLQNQ-QGGDANVSNALLADIY 261
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA------ASILVDTSSYEEISK--ILQ 151
+G A ++ K+ N A A L++ A + Y +
Sbjct: 262 ARQGQFDKAMALYDKLGNSADAVT----VARLRSQENSIKARRALSQGDYAHAEQYFRTA 317
Query: 152 KLSEPSNPMHQF--ANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
++ +NP + A +L K G +A ++ L +S I
Sbjct: 318 IANDIANPWLRLDYARLLL-----KEGHRPEAVSLIRPLEDQASSEEAI 361
>gi|157961135|ref|YP_001501169.1| tetratricopeptide repeat-containing protein [Shewanella pealeana
ATCC 700345]
gi|157846135|gb|ABV86634.1| tetratricopeptide TPR_4 [Shewanella pealeana ATCC 700345]
Length = 206
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 8/160 (5%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDA-RSSFEKILSQ-DNKLYNPLSNMY 94
+ + + E+F L + N D A ++ E Q K Y L +
Sbjct: 37 FGWNYYSDYQVAQAEAASESFQA---LSSQNTADTAMLTAAENFAKQHGQKGYQSLLELL 93
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
+A V GD V + ++ AT++ A + + Y L++++
Sbjct: 94 VAKSAVESGDLAKGEVTLKNVIATN-VDNSIVLIATMRLARVQAELGQYATAITTLEQIT 152
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+P++ +E+ G ++ G+ +KAK ++ + +
Sbjct: 153 DPAS--KAQRDELKGDFLVRQGETEKAKVAYQTAVDNGGT 190
>gi|90410875|ref|ZP_01218889.1| hypothetical protein P3TCK_14620 [Photobacterium profundum 3TCK]
gi|90328088|gb|EAS44399.1| hypothetical protein P3TCK_14620 [Photobacterium profundum 3TCK]
Length = 203
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 3/172 (1%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L ++ L + + G + K + + ++Q + +S + I + ++
Sbjct: 25 VVLGAVIGLGGLYGWRYYQGEVQTTKELTSDAYSQVMTTLDSGSENAVADVQAFISANES 84
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y+ L+ + +A V GD A + + A+ A + A I + ++
Sbjct: 85 SQYSVLAALQLAKTQVELGDLDGAIKQLTWAISQTK-DQAILPLAQTRLARIYAEQQKFD 143
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
E L K++ E+ G L G + A+ + + SP
Sbjct: 144 EALAELDKVTA--TSWQSKIAELRGDILLLKGDIIAARNAYISAQQLGASPA 193
>gi|307610242|emb|CBW99803.1| hypothetical protein LPW_15661 [Legionella pneumophila 130b]
Length = 224
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 67/178 (37%), Gaps = 6/178 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ K + Y + + + ++L + + + ++K K + + F
Sbjct: 7 EEEQLEIIKKWWKR--YGNMITIFLSIVLLIIAGYRYMNWHNDKIKQQASIAYENMMIAF 64
Query: 65 NSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ + RS +++ ++ +Y +++M +A I V+K + A VA +
Sbjct: 65 SNQNIKSVRSYANELIKNYNHTVYADIAHMTLAKIYVSKNKLEQARNELKAVAA-ESQMT 123
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A ++ A +L +Y L + NE+ G G+ Q A
Sbjct: 124 PLRQIAKIRIARLLAADKAYTNALNELS--AVEDEAYLPVINELKGDIYSAKGQYQDA 179
>gi|160876252|ref|YP_001555568.1| hypothetical protein Sbal195_3146 [Shewanella baltica OS195]
gi|160861774|gb|ABX50308.1| conserved hypothetical protein [Shewanella baltica OS195]
gi|315268441|gb|ADT95294.1| Protein of unknown function DUF2133 [Shewanella baltica OS678]
Length = 206
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 62/192 (32%), Gaps = 6/192 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
S + K + + L W Y D + + +
Sbjct: 5 STEEQQVDAIKQFWKDYGTSIFIGAFV-GLGGLYAWNYYSDVKVAQAEEASKAFHELTTK 63
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ + + F K S D K Y L + +A V D A E KV
Sbjct: 64 SADETAMLAGVAEFSK--SHDQKGYQALLELIVAKTAVEAKDYPKAIEALNKVIAAKP-G 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ ATL+ A I + + L++++ +E+ G ++ G+V+KAK
Sbjct: 121 AGLDVIATLRVARIQAEQGQIDAALATLEQVT--DKAFFAQRDELKGDFLVRQGEVEKAK 178
Query: 183 TIFEELAKDNNS 194
T ++ +
Sbjct: 179 TAYQAAMDNGGV 190
>gi|328952453|ref|YP_004369787.1| hypothetical protein Desac_0726 [Desulfobacca acetoxidans DSM
11109]
gi|328452777|gb|AEB08606.1| hypothetical protein Desac_0726 [Desulfobacca acetoxidans DSM
11109]
Length = 224
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 7/177 (3%)
Query: 17 GKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSF 76
+ + I ++I++ A W Y+ ++++ F QA S+ + D
Sbjct: 31 ARKNLRTIVIGFAVIIVAGAAWGYIQKRQMDRQERAA--EFYQASVGRASSHVPDLLKEL 88
Query: 77 EKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135
E I+ L + +Y+A++L + + AA F + A +R +
Sbjct: 89 EIIIQDYPDTGGALQARLYLANVLFGERRYQEAAAAFTALGE---AAPELRVLVAENLSY 145
Query: 136 ILVDTSSYEEISKILQKLSEPSN-PMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
Y++ S +L+ L + N P Q + G+ KA +F+++ ++
Sbjct: 146 CYEAQKEYQKASAVLEPLVQDKNLPYRQELQRRQALLYELGGEPAKALKVFKQMLEE 202
>gi|238650407|ref|YP_002916259.1| hypothetical protein RPR_01670 [Rickettsia peacockii str. Rustic]
gi|238624505|gb|ACR47211.1| hypothetical protein RPR_01670 [Rickettsia peacockii str. Rustic]
Length = 220
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 48 KKKNIVGENFAQALELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
K G+ + + L + ++ A ++ E +++ N ++ + +I ++K
Sbjct: 51 KNNQKNGDILVKTVGLETTKDNEELAFNTLENLVTTSNTKIKEIAALEQVAIKISKKKYS 110
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDT-----SSYEEISKILQKLSEPSNPMH 161
A ++ K+ + A + S+++D E+++K L + P
Sbjct: 111 EAKDLLNKIIENKEYSEISTSYARISWCSLVIDDHNLDIQDKEKLTKYLNYFDDEKKPFW 170
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
A I + +K +A+T + L NN I +++ +L N+
Sbjct: 171 ATATIIKAMWDIKNNMKPQAETNLKNLLISNNISDLIKDQAKALLVNLN 219
>gi|294637687|ref|ZP_06715965.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
gi|291089163|gb|EFE21724.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
Length = 206
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 5/161 (3%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+L W Y + + + QA E + K D + E + ++ Y L+ +
Sbjct: 35 ALFGWRYWANHQQAGMAQ-ASQTYQQASEALSGGKQD-GVALSEAFIKENANNYGVLAAL 92
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+A V K + A A ++ + L+ A + + + + K L +
Sbjct: 93 QLAQHEVDKAEFSKAQSQL-AWAAGQAKDENLKALSDLRLARVQLQDNQLDAALKTLDGV 151
Query: 154 SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ A ++ G LK G + A+ + + + S
Sbjct: 152 TAKG--WQALAQDVRGDVLLKKGDAKGAREAYSKGLAEGAS 190
>gi|229586479|ref|YP_002844980.1| hypothetical protein RAF_ORF0291 [Rickettsia africae ESF-5]
gi|228021529|gb|ACP53237.1| Unknown [Rickettsia africae ESF-5]
Length = 220
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 48 KKKNIVGENFAQALELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
K G+ + + L + ++ A ++ E +++ N ++ + +I ++K
Sbjct: 51 KNNQKNGDILVKTVGLETTKDNEELAFNTLENLVTTSNTKIKEIAALEQVAIKISKKQYS 110
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDT-----SSYEEISKILQKLSEPSNPMH 161
A ++ K+ + A + S+++D E+++K L + P
Sbjct: 111 EAKDLLNKIIENKEYSEISTSYARISWCSLVIDDHNLDIQDKEKLTKYLNYFDDEKKPFW 170
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
A I + +K +A+ + L NN I +++ +L N+
Sbjct: 171 ATATIIKAMWNIKNNMKSQAEKNLKNLLISNNVSDLIKDQAKALLVNLN 219
>gi|221133870|ref|ZP_03560175.1| putative membrane-associated protein with TPR-like domain
[Glaciecola sp. HTCC2999]
Length = 212
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 67/215 (31%), Gaps = 10/215 (4%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+ + K I +L + +L W Y D K+ E
Sbjct: 5 ATEEQQVEAIKKFWKDNGSAIIIG-AVLGLGALWGWRYYTDTQIMTKETASTEYQTLVTS 63
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L LD+A + I +Q Y PL+ A V K D A +
Sbjct: 64 LSEDAALDEATAF---ITAQGETGYAPLAGFIAAQAAVEKADFPAAISQLQNITTLTN-D 119
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL-GISALKFGKVQKA 181
+ A L+ A + T Y + L L+ +N E L G + G +A
Sbjct: 120 AVLLNVANLRLARVQFATVDY---TAALTSLNNVTNEAFIADKEALRGDILVAQGDFAQA 176
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
++ + + N + R I A I A+
Sbjct: 177 QSAYTA-SLAANDDRSVQIRLDNIGAMIDAAADAT 210
>gi|258545536|ref|ZP_05705770.1| UDP-N-acetylglucosamine-peptide-n-acetylglucosaminyltransferase
[Cardiobacterium hominis ATCC 15826]
gi|258519236|gb|EEV88095.1| UDP-N-acetylglucosamine-peptide-n-acetylglucosaminyltransferase
[Cardiobacterium hominis ATCC 15826]
Length = 925
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 4/145 (2%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
F + L K ++A + + I D+ + + IL A+ D+ A +
Sbjct: 43 AKAQFNLGVALRKQGKTEEAIAVYRSIKRTDSPELYADARFNLGFILRAQNDSAGAIAAY 102
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP-MHQFANEILGIS 171
+ + + A L + L + + + + +P ++ A LG++
Sbjct: 103 RSI--ERADSPELYAKAQLYLSITLEEQGDSADAIAAYRNIERTDSPELYAEAQFNLGVA 160
Query: 172 ALKFGKVQKAKTIFEELAKDNNSPF 196
K GK ++A ++ + K +SP
Sbjct: 161 LRKQGKTEEAIAVYRSI-KRTDSPE 184
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 3/157 (1%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F + L K ++A + + I D+ + + L +G T+ A + +
Sbjct: 154 QFNLGVALRKQGKTEEAIAVYRSIKRTDSPELYAEARFNLGVALQEQGKTEEAIAAYRSI 213
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D P A + E I+ S+ + + LGI K
Sbjct: 214 ERTDS-PELYAKAQFNLGVVLQKQDKIKEAIAAYRNTERTDSSEQYAKSQLNLGIVLQKQ 272
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
GK++ A F + + +SP + R+++ L + +
Sbjct: 273 GKIKGAIAAFRSI-ERTDSPE-LYARARIYLGITLGA 307
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 4/162 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
AI Y + + + L K+ A ++F I D+ + +Y+
Sbjct: 242 AIAAYRNTERTDSSEQYAKSQLNLGIVLQKQGKIKGAIAAFRSIERTDSPELYARARIYL 301
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
L A+GD+ A + + +P A L + E+ + +
Sbjct: 302 GITLGAQGDSAGAIAAYRSI-EHTDSPDLYAE-ARFNLGVTLREQDKIEDAIAAYRSIER 359
Query: 156 PSNPMHQF-ANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+P A LGI G A + + + +SP
Sbjct: 360 TDSPEQYAKAQVNLGIDLGAQGDNAGAIAAYRSI-ERTDSPE 400
Score = 39.2 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 4/145 (2%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
F L N A +++ I D+ + +Y++ L +GD+ +A +
Sbjct: 79 ADARFNLGFILRAQNDSAGAIAAYRSIERADSPELYAKAQLYLSITLEEQGDSADAIAAY 138
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP-MHQFANEILGIS 171
+ D P A L EE + + + +P ++ A LG++
Sbjct: 139 RNIERTDS-PELYAE-AQFNLGVALRKQGKTEEAIAVYRSIKRTDSPELYAEARFNLGVA 196
Query: 172 ALKFGKVQKAKTIFEELAKDNNSPF 196
+ GK ++A + + + +SP
Sbjct: 197 LQEQGKTEEAIAAYRSI-ERTDSPE 220
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 3/149 (2%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+ AI Y + + ++ L DA +++ I D+ +
Sbjct: 96 AGAIAAYRSIERADSPELYAKAQLYLSITLEEQGDSADAIAAYRNIERTDSPELYAEAQF 155
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+ L +G T+ A ++ + D P A L + EE + +
Sbjct: 156 NLGVALRKQGKTEEAIAVYRSIKRTDS-PELYAE-ARFNLGVALQEQGKTEEAIAAYRSI 213
Query: 154 SEPSNP-MHQFANEILGISALKFGKVQKA 181
+P ++ A LG+ K K+++A
Sbjct: 214 ERTDSPELYAKAQFNLGVVLQKQDKIKEA 242
Score = 38.4 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+ I Y + K+ F + L A +++ I D+ + +
Sbjct: 420 AGEIVAYRSIRRKDSKEAYAKARFNLGITLRVQGDSAGAIAAYRSIKRTDSPEWYAKARF 479
Query: 94 YIASILVAKGDTKNAAEIFLKV 115
+ L +G K A + +
Sbjct: 480 NLGVALQKQGKAKEAVAAYRSI 501
Score = 38.0 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 47/154 (30%), Gaps = 3/154 (1%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
AI Y + + ++L A +++ I D+ + + +
Sbjct: 350 AIAAYRSIERTDSPEQYAKAQVNLGIDLGAQGDNAGAIAAYRSIERTDSPEQYAKAQLCL 409
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
L +GD+ + + D + A L + +
Sbjct: 410 GITLGTQGDSAGEIVAYRSIRRKDSKEAYAK--ARFNLGITLRVQGDSAGAIAAYRSIKR 467
Query: 156 PSNP-MHQFANEILGISALKFGKVQKAKTIFEEL 188
+P + A LG++ K GK ++A + +
Sbjct: 468 TDSPEWYAKARFNLGVALQKQGKAKEAVAAYRSI 501
>gi|145636362|ref|ZP_01792031.1| co-chaperone HscB [Haemophilus influenzae PittHH]
gi|145270527|gb|EDK10461.1| co-chaperone HscB [Haemophilus influenzae PittHH]
Length = 204
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVSGMFGWRYWQAHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|311113427|ref|YP_003984649.1| hypothetical protein HMPREF0733_11758 [Rothia dentocariosa ATCC
17931]
gi|310944921|gb|ADP41215.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931]
Length = 792
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 7/164 (4%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
++ W + + + N A + KLD+A +++ K+ D+ + +
Sbjct: 176 AITTWSNIHHNDNPQAYAGAQRNLGNAYH--DQGKLDEAIAAWSKVRHSDDPQAYASAQL 233
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+ + +G A + + ++D P A A L D E+ K+
Sbjct: 234 GLGNAYKDQGKLDEAITTWSNIHHNDN-PQAY-AWAQLGLGVAYHDQGEPEQAIAAWSKV 291
Query: 154 SEPSNPMHQF-ANEILGISALKFGKVQKAKTIFEEL--AKDNNS 194
+P A LG++ G+ ++A + ++ + D +
Sbjct: 292 RHSDDPKAYAWAQYSLGVAYHDQGEPEQAIAAWSKVRHSDDPKA 335
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 5/133 (3%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ KLD+A +++ I D+ + + + + +G A + + + + P A
Sbjct: 97 DQGKLDEAITTWSNIHHNDDPQAYAWAQLGLGNAYKDQGKLDEAITTWSNI-HHNDDPQA 155
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF-ANEILGISALKFGKVQKAKT 183
A L + D +E + NP A LG + GK+ +A
Sbjct: 156 YAS-AQLGLGNAYHDQGKLDEAITTWSNIHHNDNPQAYAGAQRNLGNAYHDQGKLDEAIA 214
Query: 184 IFEEL--AKDNNS 194
+ ++ + D +
Sbjct: 215 AWSKVRHSDDPQA 227
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 7/164 (4%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
++ W + ++ + + KLD+A +++ I DN +
Sbjct: 140 AITTWSNIHH--NDDPQAYASAQLGLGNAYHDQGKLDEAITTWSNIHHNDNPQAYAGAQR 197
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+ + +G A + KV P A A L + D +E +
Sbjct: 198 NLGNAYHDQGKLDEAIAAWSKV-RHSDDPQAYAS-AQLGLGNAYKDQGKLDEAITTWSNI 255
Query: 154 SEPSNPMHQF-ANEILGISALKFGKVQKAKTIFEEL--AKDNNS 194
NP A LG++ G+ ++A + ++ + D +
Sbjct: 256 HHNDNPQAYAWAQLGLGVAYHDQGEPEQAIAAWSKVRHSDDPKA 299
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 49/145 (33%), Gaps = 3/145 (2%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+ K L + +LD +++ K+ D+ + + + + +G
Sbjct: 41 RDDNPKAYAWAQLNLGLAYESPGELDQVIAAWSKVRHSDDPKAYAWAQLGLGNAYKDQGK 100
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP-MHQF 163
A + + + + P A A L + D +E + +P +
Sbjct: 101 LDEAITTWSNI-HHNDDPQAY-AWAQLGLGNAYKDQGKLDEAITTWSNIHHNDDPQAYAS 158
Query: 164 ANEILGISALKFGKVQKAKTIFEEL 188
A LG + GK+ +A T + +
Sbjct: 159 AQLGLGNAYHDQGKLDEAITTWSNI 183
>gi|303250431|ref|ZP_07336629.1| hypothetical protein APP6_1846 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252216|ref|ZP_07534113.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|302650757|gb|EFL80915.1| hypothetical protein APP6_1846 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860138|gb|EFM92154.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 457
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 5/169 (2%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+ K + L K+D+A ++ + +D+ + + I L +G
Sbjct: 32 QEDDVKQYARAQLNIGIILGKQGKVDEAIVAYRNVNREDSVESYARAQLNIGITLGEQGK 91
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQF 163
A + V +D A + A L IL + + EI E S +
Sbjct: 92 VDEALVAYRNVNREDSAEQYAK--AQLNIGIILGEQGKIDEEIEAYYNVTREDSAEQYAI 149
Query: 164 ANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A LGI+ K GKV +A + + +++++ + R+Q+ L +
Sbjct: 150 AQVNLGIALGKQGKVDQALVAYRNVNREDSA--EVYVRAQINLGITLGE 196
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 3/160 (1%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
AI Y + ++ + L K+D+A ++ + +D+ + + I
Sbjct: 59 AIVAYRNVNREDSVESYARAQLNIGITLGEQGKVDEALVAYRNVNREDSAEQYAKAQLNI 118
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE-ISKILQKLS 154
IL +G E + V +D A A + L ++ +
Sbjct: 119 GIILGEQGKIDEEIEAYYNVTREDSAEQY--AIAQVNLGIALGKQGKVDQALVAYRNVNR 176
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
E S ++ A LGI+ + GK +A F +++++++
Sbjct: 177 EDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDST 216
Score = 42.7 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 65/181 (35%), Gaps = 10/181 (5%)
Query: 43 DGSHEKKKNIVGENFAQA-----LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
+ + + E +A A + L K+D A ++ + +D+ + + +
Sbjct: 133 EAYYNVTREDSAEQYAIAQVNLGIALGKQGKVDQALVAYRNVNREDSAEVYVRAQINLGI 192
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE-ISKILQKLSEP 156
L +G A F V+ +D + A + L +E I E
Sbjct: 193 TLGEQGKFDEAIAAFNNVSREDS--TELYAIAQVNLGITLRKQGRGDEAIVAYRNVNRED 250
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
S ++ +LG+ K+ +A+ F + ++ + T++Q+ L + +
Sbjct: 251 SAKLYVKVQFLLGLIFESQDKLDEARDAFNNIRLSDSV--ELYTKAQVYLKVLNIGKKEI 308
Query: 217 K 217
+
Sbjct: 309 R 309
>gi|238752473|ref|ZP_04613949.1| hypothetical protein yrohd0001_22450 [Yersinia rohdei ATCC 43380]
gi|238709322|gb|EEQ01564.1| hypothetical protein yrohd0001_22450 [Yersinia rohdei ATCC 43380]
Length = 206
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 6/188 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + + QA + ++N D + EK +
Sbjct: 23 KALAVGVVLGIGALVGWRYWQSNQNTAMTEASS-AYQQASDALSAN-SADGVALAEKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A V + + AA+ + + L+ A + +
Sbjct: 81 GNKNNYGVLAGLELAHHFVEQNEFDKAAQQLTQALGQTKDENLL-SLINLRLARLQLQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+E K L + A ++ G L G A+ + + ++N+ +
Sbjct: 140 KPDEALKTLD--AVQGEGWTAMAQDVRGDVLLSKGDTAGARAAYSK-GIESNASQALQAL 196
Query: 202 SQMILANI 209
+M L N+
Sbjct: 197 LRMKLNNL 204
>gi|261856342|ref|YP_003263625.1| thioredoxin [Halothiobacillus neapolitanus c2]
gi|261836811|gb|ACX96578.1| thioredoxin [Halothiobacillus neapolitanus c2]
Length = 287
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 9/159 (5%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
QA E ++ +++A ++ + + + L ++ A I+ GD A +I + D
Sbjct: 122 QAREQADAGAIEEAIDLLKQANAIEPNNADVLIDL--AEIISKTGDHDQAMQIIDALPID 179
Query: 119 DLAPLAVRYA-ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
V+ A + A D S E++ ++ + A E L
Sbjct: 180 VATRKDVKELKARIHLAQHAGDGPSVEDLKARIEADDNDLD-----AREQLASRCAMMQD 234
Query: 178 VQKA-KTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
+ A F + +D R + + ++ SD
Sbjct: 235 YECALAQFFAIMQRDRQFKDDAGRRGLLDIFELLGSDHA 273
>gi|260752475|ref|YP_003225368.1| cellulase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551838|gb|ACV74784.1| Cellulase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 1667
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F +A +N+LD A+S E++ +Q +SN +A I +G A ++ K+
Sbjct: 219 RFEEAQAASRANQLDKAQSILEQLQNQ-QGGDANVSNALLADIYARQGQFDKAMALYDKL 277
Query: 116 ANDDLAPLAVRYAATLQA------ASILVDTSSYEEISK--ILQKLSEPSNPMHQF--AN 165
N A A L++ A + Y + ++ +NP + A
Sbjct: 278 GNSADAVT----VARLRSQENSIKARRALSQGDYAHAEQYFRTAIANDIANPWLRLDYAR 333
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+L K G +A ++ L +S I
Sbjct: 334 LLL-----KEGHRPEAVSLIRPLEDQASSEEAI 361
>gi|218548050|ref|YP_002381841.1| hypothetical protein EFER_0659 [Escherichia fergusonii ATCC 35469]
gi|218355591|emb|CAQ88202.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
gi|324113007|gb|EGC06983.1| yfgM [Escherichia fergusonii B253]
gi|325496454|gb|EGC94313.1| hypothetical protein ECD227_0551 [Escherichia fergusonii ECD227]
Length = 206
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 68/175 (38%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E ++ + A+ ++ K + EK ++
Sbjct: 23 KALAVGVILGVGALIGWRYWNSHQVETARS-ASLAYQNAVTEASAGKP-EGIVVAEKFVT 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L+++ +A V K + + A + + ++ L+ A + V
Sbjct: 81 ENKNTYGALASLELAQQFVDKNELQKAEAQLQQ-GLTATSDENLKAVINLRLARVQVQLK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G + L G Q A++ +E K + SP
Sbjct: 140 QADAALKTLDTIKGEG--WAAIVADLRGEALLSKGDKQGARSAWEAGVKSDASPA 192
>gi|301060387|ref|ZP_07201250.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300445583|gb|EFK09485.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 785
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 58/173 (33%), Gaps = 16/173 (9%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQ---------ALELFNSNKLDDARS 74
+ + L++L W+ S + G A L + D+A
Sbjct: 381 FSGMACLIVLGGLAWWQAGYWSDSETLFRHGLQVVPNNYVAHNGLARALEAQGETDEAIR 440
Query: 75 SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA 134
FE L A IL A G + A E +L V + P V+ A + A
Sbjct: 441 HFETALRICPGF--TDGRYNFARILAANGKKREATEQYLSVL--ESDPGFVQ--AHVNLA 494
Query: 135 SILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+IL D E K +K + N + A L + + G+ A + +
Sbjct: 495 NILADQGYLNEAVKHYEK-ALTLNRENANARYNLANTFFRAGRTDDAIAQYRK 546
Score = 40.4 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 48/132 (36%), Gaps = 7/132 (5%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+ A L + K +A + +L D +++ +A+IL +G A + + K
Sbjct: 456 RYNFARILAANGKKREATEQYLSVLESDPGF--VQAHVNLANILADQGYLNEAVKHYEKA 513
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ A A+ ++ +K + P + LG + ++
Sbjct: 514 LTLNRENAN----ARYNLANTFFRAGRTDDAIAQYRK-ALDIRPNDPSIHYNLGNAYMRN 568
Query: 176 GKVQKAKTIFEE 187
G ++A + + E
Sbjct: 569 GNFEQAVSQYSE 580
Score = 38.8 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ F L L NS + + F I Q + + + +A L +G T A
Sbjct: 653 QPEDATARFQLGLILSNSGRHSEGEEQF-SIALQIKPNF-VEARIALADELAVQGKTSEA 710
Query: 109 AEIFLKVANDDLA--PLAVRYAATLQAASILVDTSS 142
+ + + A P+ A L A V+ S+
Sbjct: 711 VAHYNEAMKMNPAVKPMVYYNLACLYALQHKVEEST 746
>gi|261345332|ref|ZP_05972976.1| putative membrane protein [Providencia rustigianii DSM 4541]
gi|282566666|gb|EFB72201.1| putative membrane protein [Providencia rustigianii DSM 4541]
Length = 207
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 61/186 (32%), Gaps = 8/186 (4%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+N + K + L+I + + W Y +
Sbjct: 5 TNENDQVDAVKRFFANNGVALVIGLVI-GVGGVFGWNYWQSHKSNV-LQESAAKYESVST 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLA 121
++ + +K ++ + +Y+ + + +A + V KGD +A + +A
Sbjct: 63 QLHTG-SAQGIEAAKKFAAETDDVYSAMMGLELAQVSVDKGDLASADKALTDALAKAKTV 121
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ L+ A + + + + + K+ A ++ G + L G A
Sbjct: 122 D--MQDVINLRLARVQLAQGNADAALASIAKI--QGKSWQAAAQDVRGDALLHKGDKSGA 177
Query: 182 KTIFEE 187
K + +
Sbjct: 178 KAAYTQ 183
>gi|197120109|ref|YP_002140536.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
gi|197089469|gb|ACH40740.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 1450
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ + + E FA AL+L S + D+A + + + + + + + ++L G +
Sbjct: 4 DSRADSPTETFAAALDLQKSGRRDEAERLYRALAASG-GKFAADACINLGALLDESGRAE 62
Query: 107 NAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A E + +A + PLA+ A S L + E ++ + + P A
Sbjct: 63 EALEKYREALALREGDPLALNN-----AGSTLFKLGRFHEAAEQF-RHALERAPDSLEAQ 116
Query: 166 EILGISALKFGKVQKAKTIFEELA 189
LG + + G + A +F +L
Sbjct: 117 VALGAALQREGDLPAALAVFRDLV 140
>gi|300691804|ref|YP_003752799.1| hypothetical protein RPSI07_2160 [Ralstonia solanacearum PSI07]
gi|299078864|emb|CBJ51525.1| conserved protein of unknown function [Ralstonia solanacearum
PSI07]
Length = 211
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 63/163 (38%), Gaps = 5/163 (3%)
Query: 27 LLILMILSLAIWFYL--FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
+ I+++L++A WF + + +++ E +A++ ++ K+ A + E
Sbjct: 28 IAIVVLLAVAAWFGWKNWQRKQAGEASVLYEQVQKAVDAKDAEKIKRAAADMED--KFGR 85
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y ++ + A L D A + L+ D + + A L+ A +L+D +Y+
Sbjct: 86 TAYAQMAALSAAKALYEANDAAGA-KAQLQWTLDHASDDEYKAVAKLRLAGLLLDEKAYD 144
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ ++ P+ ++A +A
Sbjct: 145 QGLALVSGDVAPAFAALYADRRGDLLAAQNKKDEARAAYKLAL 187
>gi|229844542|ref|ZP_04464682.1| hypothetical protein CGSHi6P18H1_09510 [Haemophilus influenzae
6P18H1]
gi|229812791|gb|EEP48480.1| hypothetical protein CGSHi6P18H1_09510 [Haemophilus influenzae
6P18H1]
Length = 204
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQAHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQTKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEVNLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|241662757|ref|YP_002981117.1| hypothetical protein Rpic12D_1153 [Ralstonia pickettii 12D]
gi|240864784|gb|ACS62445.1| conserved hypothetical protein [Ralstonia pickettii 12D]
Length = 211
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 74/177 (41%), Gaps = 8/177 (4%)
Query: 27 LLILMILSLAIWFYL--FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
+ I+++L++A WF + + +++ E +A++ ++ K+ A + E
Sbjct: 28 VAIVVLLAVAGWFGWKNWQRKQAGEASVLYEQVQKAVDGKDAEKIKRAATDMED--KFGG 85
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y ++ + A L D +A + L+ D + A L+ A +L+D +Y+
Sbjct: 86 TAYAQMTALAAAKALYEANDVASA-KAQLQWTVDHARDDEYKALAKLRLAGLLLDEKAYD 144
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ ++ P+ ++A K ++A+ + +LA + P S R
Sbjct: 145 QGIALVSGDVAPAFAGLYADRRGDLLAA--QNKNEEARAAY-KLALEKFGPADASAR 198
>gi|91792616|ref|YP_562267.1| tetratricopeptide TPR_2 [Shewanella denitrificans OS217]
gi|91714618|gb|ABE54544.1| Tetratricopeptide TPR_2 [Shewanella denitrificans OS217]
Length = 206
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 9/184 (4%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKK---KNIVGENFAQ-ALEL 63
++ + + K +K + L + Y ++ E K + E+F AL+
Sbjct: 5 STEEQQVDAIKQFWKDYGVSIALGAVVGLGGLYGWNTYSEHKVASAELASESFQSIALDA 64
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
NS + A FEK + D + Y L +A V GD + A + + KV A
Sbjct: 65 ENSPNVMMAAVEFEK--NHDQQGYQALLQFMLAKSAVEAGDLEKAEQAYTKVIAAKPA-A 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ A L+ + + + + L+ ++ + +E+ G + G+ KAK
Sbjct: 122 GLDMIAALRLSRVQAEQGNLGMALATLEHVT--DSAYAAQRDELKGDFYARQGEFDKAKN 179
Query: 184 IFEE 187
++
Sbjct: 180 AYQA 183
>gi|300741345|ref|ZP_07071366.1| putative UDP-N-acetylglucosamine-peptide-n-
acetylglucosaminyltransferase [Rothia dentocariosa M567]
gi|300380530|gb|EFJ77092.1| putative UDP-N-acetylglucosamine-peptide-n-
acetylglucosaminyltransferase [Rothia dentocariosa M567]
Length = 718
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 9/156 (5%)
Query: 45 SHEKKKNIVGENFAQAL-----ELFNSNKLDDARSSFEKIL-SQDNKLYNPLSNMYIASI 98
S +++ E +AQAL KL A ++ K+ D K Y + + +
Sbjct: 37 SSIRREEAAPEIYAQALLGIGAAYQALGKLKKAIKAWSKVRHGDDPKAYAG-AQLGLGLA 95
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+G +A + + + +AP A L D ++ + N
Sbjct: 96 YYTRGKLDDAIAAWSNIHREKIAPETYAK-AQLNLGVAYKDQGKLDDAIAAWSNIHREDN 154
Query: 159 P-MHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
P + A LG++ GK+ A + + +D+N
Sbjct: 155 PETYAKAQLGLGLAYRTQGKLDDAIAAWSNIHRDDN 190
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
Query: 44 GSHEKKKNIVGENFAQA-----LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
S+ ++ I E +A+A + + KLDDA +++ I +DN + + +
Sbjct: 109 WSNIHREKIAPETYAKAQLNLGVAYKDQGKLDDAIAAWSNIHREDNPETYAKAQLGLGLA 168
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+G +A + + DD + L AA +++ K + N
Sbjct: 169 YRTQGKLDDAIAAWSNIHRDDNPETYAQAQLGLGAAYYA--QEDWKQTIKTWSNIHRDDN 226
Query: 159 P-MHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
P + A LGI+ +G + KA + + +D+N
Sbjct: 227 PETYAQAQLNLGITYYTWGMLYKAIEAWSNIHRDDN 262
>gi|206578036|ref|YP_002237137.1| hypothetical protein KPK_1277 [Klebsiella pneumoniae 342]
gi|206567094|gb|ACI08870.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
Length = 206
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL I +L W Y + ++ + QA SN + S EK S
Sbjct: 23 KALAVGVILGIGALVGWRYWTSHQQDTARD-ASLAYEQATSALKSNTP-EVLSGAEKFAS 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y +++ +A V + D NA + + ++ +++ A + +
Sbjct: 81 DNKNTYGAFASLELAQHFVEQNDLPNAEKQLQQGLAAASDDN-LKSVISMRLARVQLQMK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G L G Q A+ +E K + SP
Sbjct: 140 QADAALKTLDSIKGEG--WTAIVADLRGEILLSKGDKQGARAAWEAGVKSDASPA 192
>gi|24374821|ref|NP_718864.1| hypothetical protein SO_3310 [Shewanella oneidensis MR-1]
gi|24349507|gb|AAN56308.1|AE015769_4 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 206
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 6/192 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
S + K Y + ++ L + + +K + F QAL
Sbjct: 5 STEEQQVDAIKQFWKD--YGISIGIGAVVGLGGLYGWNTYSDMKIEKAEEASQAF-QALT 61
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+S+++ E + D K Y L ++ +A V D A E KV
Sbjct: 62 TKSSDEVAMLAGVAEFSKNYDQKGYQALLDLIVAKTAVEAKDFPKAEEALKKVIAAKP-G 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ ATL+ A I + + L++++ E+ G ++ G+ KAK
Sbjct: 121 AGLDTIATLRLARIQAEQGQVDTALATLEQVT--DKAFLAQREELKGDFFVRQGQADKAK 178
Query: 183 TIFEELAKDNNS 194
T ++ +
Sbjct: 179 TAYQAAMDNGGV 190
>gi|303257592|ref|ZP_07343604.1| tetratricopeptide repeat protein [Burkholderiales bacterium 1_1_47]
gi|330999633|ref|ZP_08323342.1| tetratricopeptide repeat protein [Parasutterella excrementihominis
YIT 11859]
gi|302859562|gb|EFL82641.1| tetratricopeptide repeat protein [Burkholderiales bacterium 1_1_47]
gi|329574139|gb|EGG55715.1| tetratricopeptide repeat protein [Parasutterella excrementihominis
YIT 11859]
Length = 211
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 61/167 (36%), Gaps = 9/167 (5%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI- 79
+ + ++ + A F + K+ G +AQ ++ N ++ ++
Sbjct: 21 WGNLILTVVTVACLCAAGFQGWRWYQMKESTDAGVLYAQMIQASNMKDEARVQAIAGRLH 80
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
S + Y + + A G A + + + D P ++ A+++ A + +D
Sbjct: 81 ESYASTTYAGMGALLAAHNAETAGKYAEAEKALKWIVDSDKYPE-LKPLASVRLAGVYLD 139
Query: 140 TSSYEE---ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
Y++ + ++ P++ + +G L G V A+
Sbjct: 140 EGKYDQGLTVLNAVKDAKGEEVPVY----DRMGDLYLAKGDVAAARK 182
>gi|288934096|ref|YP_003438155.1| hypothetical protein Kvar_1215 [Klebsiella variicola At-22]
gi|290508294|ref|ZP_06547665.1| hypothetical protein HMPREF0485_00065 [Klebsiella sp. 1_1_55]
gi|288888825|gb|ADC57143.1| Protein of unknown function DUF2133 [Klebsiella variicola At-22]
gi|289777688|gb|EFD85685.1| hypothetical protein HMPREF0485_00065 [Klebsiella sp. 1_1_55]
Length = 206
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL I +L W Y + ++ + QA SN + S EK +
Sbjct: 23 KALAVGVILGIGALVGWRYWTSHQQDTARD-ASLAYEQATSALKSNTP-EVLSGAEKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y +++ +A V + D NA + + ++ +++ A + +
Sbjct: 81 DNKNTYGAFASLELAQHFVEQNDLPNAEKQLQQGLAAASDDN-LKSVISMRLARVQLQMK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G L G Q A+ +E K + SP
Sbjct: 140 QADAALKTLDSIKGEG--WTAIVADLRGEILLSKGDKQGARAAWEAGVKSDASPA 192
>gi|145632617|ref|ZP_01788351.1| hypothetical protein CGSHi3655_02344 [Haemophilus influenzae 3655]
gi|144986812|gb|EDJ93364.1| hypothetical protein CGSHi3655_02344 [Haemophilus influenzae 3655]
Length = 204
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQAHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEVNLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|54297455|ref|YP_123824.1| hypothetical protein lpp1500 [Legionella pneumophila str. Paris]
gi|53751240|emb|CAH12651.1| hypothetical protein lpp1500 [Legionella pneumophila str. Paris]
Length = 224
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 68/178 (38%), Gaps = 6/178 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ K + Y + + + ++L + + + ++K K + + F
Sbjct: 7 EEEQLEIIKKWWKR--YGNMITIFLSIVLLIIAGYRYMNWHNDKIKQQASIAYENMMIAF 64
Query: 65 NSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ + RS +++ ++ +Y +++M +A I V+K + A VA+ +
Sbjct: 65 SNQNIKSVRSYANELIKNYNHTVYADIAHMTLAKIYVSKNKLEQARNELKAVAS-ESQMT 123
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A ++ A +L +Y L + NE+ G G+ Q A
Sbjct: 124 PLRQIAKIRIARLLAADKAYTNALNELS--AVEDEAYLPVINELKGDIYSAKGQYQDA 179
>gi|56551981|ref|YP_162820.1| cellulose synthase operon C domain-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56543555|gb|AAV89709.1| cellulose synthase operon C domain protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 1336
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F +A +N+LD A+S E++ +Q +SN +A I +G A ++ K+
Sbjct: 219 RFEEAQAASRANQLDKAQSILEQLQNQ-QGGDANVSNALLADIYARQGQFDKAMALYDKL 277
Query: 116 ANDDLAPLAVRYAATLQA------ASILVDTSSYEEISK--ILQKLSEPSNPMHQF--AN 165
N A A L++ A + Y + ++ +NP + A
Sbjct: 278 GNSADAVT----VARLRSQENSIKARRALSQGDYAHAEQYFRTAIANDIANPWLRLDYAR 333
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+L K G +A ++ L +S I
Sbjct: 334 LLL-----KEGHRPEAVSLIRPLEDQASSEEAI 361
>gi|145638721|ref|ZP_01794330.1| co-chaperone HscB [Haemophilus influenzae PittII]
gi|145272316|gb|EDK12224.1| co-chaperone HscB [Haemophilus influenzae PittII]
gi|309750211|gb|ADO80195.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 204
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIIAFILGVGGMFGWRYWQAHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSVAEANLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|320539278|ref|ZP_08038948.1| putative conserved protein [Serratia symbiotica str. Tucson]
gi|320030670|gb|EFW12679.1| putative conserved protein [Serratia symbiotica str. Tucson]
Length = 206
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 6/124 (4%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W Y + +++ + + + K DD ++ EK +
Sbjct: 23 KALAVGVVLGIAALVGWRYWQNHQSVDLM-AASQSYQEVSDRLAAGKPDDVAAA-EKFVQ 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNA----AEIFLKVANDDLAPLAVRYAATLQAASIL 137
++ Y+ L+ + +A V + D A + + +D+L A +Q
Sbjct: 81 ANSNSYSVLAALQLAKHFVEQNDVAKAEQQLVQAQSQTRDDNLLSQINLRLARVQLQEKK 140
Query: 138 VDTS 141
D +
Sbjct: 141 WDHA 144
>gi|152971374|ref|YP_001336483.1| hypothetical protein KPN_02843 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238895968|ref|YP_002920704.1| hypothetical protein KP1_4093 [Klebsiella pneumoniae NTUH-K2044]
gi|262040250|ref|ZP_06013501.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330007781|ref|ZP_08306078.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
gi|150956223|gb|ABR78253.1| hypothetical protein KPN_02843 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238548286|dbj|BAH64637.1| hypothetical protein KP1_4093 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259042359|gb|EEW43379.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328535325|gb|EGF61810.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
Length = 206
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL I +L W Y + ++ + +A SN + S EK +
Sbjct: 23 KALAVGVILGIGALVGWRYWTSHQQDTARD-ASLAYEKATSALKSNTP-EVLSGAEKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y +++ +A V + D NA + + ++ +++ A + +
Sbjct: 81 DNKNTYGAFASLELAQHFVEQNDLPNAEKQLQQGLAAASDDN-LKSVISMRLARVQLQMK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L + ++ G L G Q A+ +E K + SP
Sbjct: 140 QADAALKTLDSIKGEG--WTAIVADLRGEILLSKGDKQGARAAWEAGVKSDASPA 192
>gi|187928154|ref|YP_001898641.1| hypothetical protein Rpic_1061 [Ralstonia pickettii 12J]
gi|309782319|ref|ZP_07677046.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA]
gi|187725044|gb|ACD26209.1| conserved hypothetical protein [Ralstonia pickettii 12J]
gi|308918937|gb|EFP64607.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA]
Length = 211
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 73/177 (41%), Gaps = 8/177 (4%)
Query: 27 LLILMILSLAIWFYL--FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
+ I+++L++A WF + + +++ E +A++ ++ K+ A + E
Sbjct: 28 VAIVVLLAVAGWFGWKNWQRKQAGEASVLYEQVQKAVDGKDAEKIKRAATDMED--KFGG 85
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y ++ + A L D +A + L+ D + A L+ A +L+D +Y+
Sbjct: 86 TAYAQMTALAAAKALYEANDVASA-KAQLQWTVDHARDDEYKALAKLRLAGLLLDEKAYD 144
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ ++ P+ ++A K + A+ + +LA + P S R
Sbjct: 145 QGIALVSGDVAPAFAGLYADRRGDLLAA--QNKNEDARAAY-KLALEKFGPADASAR 198
>gi|332288523|ref|YP_004419375.1| hypothetical protein UMN179_00442 [Gallibacterium anatis UMN179]
gi|330431419|gb|AEC16478.1| hypothetical protein UMN179_00442 [Gallibacterium anatis UMN179]
Length = 206
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 5/186 (2%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
++++ + + K K I +IL I+ + W Y + G + K + F+Q +
Sbjct: 5 TSDEQLQIEEIKQWWKENGKVIIAAVILAIVGVFGWRY-WQGYQQGKIHQSSAEFSQIMA 63
Query: 63 LFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
A + + + + Y+ + A + ++AA+ K A ++
Sbjct: 64 ATEQADAGKANAQLTQFVETNPSSAYSAFLLLEQAKKQIDANQWQHAADTLQK-ALNNAK 122
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A+ L+ AS+ +E L K++ + G G +A
Sbjct: 123 DAALISLIALRLASVQTQLKQFEPALATLGKVT--DQAWQGRKAMLSGEIYNAMGNKAEA 180
Query: 182 KTIFEE 187
K FE
Sbjct: 181 KKSFEA 186
>gi|260598899|ref|YP_003211470.1| hypothetical protein CTU_31070 [Cronobacter turicensis z3032]
gi|260218076|emb|CBA32823.1| UPF0070 protein yfgM [Cronobacter turicensis z3032]
Length = 206
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 4/196 (2%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
ME + N K + +++ + + + ++GS ++
Sbjct: 1 MEIYENENEQLDAVKRFFAENGKALAVGVVLGIGALVGWRFWNGSQVDSARESSLHYQNV 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ ++ S+ ++ ++Q+ Y L+ + +A V K D A + L+ ++
Sbjct: 61 MTDARADDPKT-LSAAQQFVAQNQNSYGALAALELAQRYVDKNDLAQAVQQ-LQQGIENT 118
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+R L+ A I + + K L+ + + ++ G + L G Q
Sbjct: 119 KDENLRSLINLRLARIQIQQKQADAALKTLENVKGEN--WSAMVADLRGDALLSKGDKQG 176
Query: 181 AKTIFEELAKDNNSPF 196
A+ + + A D NSP
Sbjct: 177 ARDAWSKGADDKNSPA 192
>gi|327402025|ref|YP_004342863.1| TPR domain-containing protein [Fluviicola taffensis DSM 16823]
gi|327317533|gb|AEA42025.1| TPR domain-containing protein [Fluviicola taffensis DSM 16823]
Length = 210
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 71/182 (39%), Gaps = 24/182 (13%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+ I ++I +I+ + + + K E + + L L + +D A + E +
Sbjct: 21 RLITAVVIGLIVGILGYILYKQFIYAPKNLKANEGYYKGLNLAAKDSVDAAITELEPFVK 80
Query: 82 QDNKLY--NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV---------RYAAT 130
+ N Y ++ +A +AKGD K A ++ V+ +D ++
Sbjct: 81 K-NSGYQGGEVAKFTLARQYMAKGDFKKALKLLEDVSLEDTYGPSLVLGLQGDCNSEMGK 139
Query: 131 LQAAS-ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
+ A + VD + +E + P+ A ++ A + KAK ++E +
Sbjct: 140 YKEALDLYVDAADSDE-----NDWTTPT--YLFKAGQV----AEEIKDFAKAKELYERIN 188
Query: 190 KD 191
KD
Sbjct: 189 KD 190
>gi|300741344|ref|ZP_07071365.1| TPR repeat protein [Rothia dentocariosa M567]
gi|300380529|gb|EFJ77091.1| TPR repeat protein [Rothia dentocariosa M567]
Length = 446
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
KL+ A +++E++ + Y + I + V +G A E + ++ P A
Sbjct: 276 QGKLEQAIAAWERVPESLPERYAS-AQYNIGTSYVEQGKPTKAVEAWERIPASASEPYA- 333
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
A I + + ++ +++ + ++ A +G + K G+ +A ++
Sbjct: 334 --VAQYNTGLIYEEQGNIDDALVAWERVPKDASEHFYKAQFNIGGAYYKLGETDEAVAVW 391
Query: 186 EELAKDNNSPFGISTRSQMILAN--IIASDQRNKK 218
+ + P S + +M N IIA +Q K
Sbjct: 392 KNI------PESASEQYEMAQTNLSIIAENQEKAK 420
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 12/155 (7%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
+ K F + N +D+A +++++ LY + + +
Sbjct: 111 WKNIPSAAPKQYAMAQFNLGVTYAQQNNVDEAIEAYQRVPKDVTNLYAH-AQYNLGATYT 169
Query: 101 AKGDTKNAAEIFLKV--ANDDLAPLAVRYAATLQAASILVDTSS--YEEISKILQKLSEP 156
+G AAE + V A A+ L + +S Y+++ + P
Sbjct: 170 QQGKMDEAAEAYKNVPDAAPAKYAKALNNLGVLYEGQGKAEQASEAYQQV-----PSTVP 224
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+ A LG++ GK ++A ++E ++ D
Sbjct: 225 DQ--YAMALNNLGVTYYNQGKTEQALELWETVSAD 257
>gi|95929845|ref|ZP_01312586.1| hypothetical protein Dace_2499 [Desulfuromonas acetoxidans DSM 684]
gi|95134141|gb|EAT15799.1| hypothetical protein Dace_2499 [Desulfuromonas acetoxidans DSM 684]
Length = 786
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 4/175 (2%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+ + + +IA L L E+ + V A +N + A+
Sbjct: 261 EYARLLHMYIAARQFADPYQLMAALELDAQRQEEAQFSVYSELLHAEVALATNDMRSAQI 320
Query: 75 SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQA 133
+ + Q A + +GD A E + +AN P ++ A
Sbjct: 321 VLDAQMKQGKAGLESRYQQRQADVWFDQGDYAAAVERYQSLANQLADFPSSLANFAMSLY 380
Query: 134 ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
D + ++ + L+ + +P + A +L +S + G + ++
Sbjct: 381 RQKDYD-GAIVQLKRFLEGVDDPES--RDMARYLLAMSMIHRGDKDAGYDLLHQI 432
>gi|309972471|gb|ADO95672.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 204
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFA 58
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQAHQAEQIAQASAQYDTLI 61
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+++ K + + + + Y + + A K D A + A
Sbjct: 62 NSVQQDEQAKKANIE---QFVQANSKTAYAVFALLDEAKKATEKQDFSAAEVNLNQ-ALT 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFG 176
+ L+ +++ + L ++ S A + + G + G
Sbjct: 118 QSQDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKG 173
Query: 177 KVQKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 174 DKVAAKNSFEQAQQSG 189
>gi|311278556|ref|YP_003940787.1| hypothetical protein Entcl_1236 [Enterobacter cloacae SCF1]
gi|308747751|gb|ADO47503.1| Protein of unknown function DUF2133 [Enterobacter cloacae SCF1]
Length = 206
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 5/173 (2%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+A +IL + +L W Y E + Q++ +S K D A S+ EK + +
Sbjct: 25 LAVGVILGVGALVGWRYWTSH-QENNARDASLAYEQSVSSLSSGKPD-ALSAAEKFAAAE 82
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y +++ +A V K +NA + + ++ ++ A + +
Sbjct: 83 KNTYGAFASLELAQQFVDKNQLENAEKQLQQGLAAASDDN-LKSVINMRLARVQLQMKQP 141
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ K L+ + ++ G L G Q A+ +E K + SP
Sbjct: 142 DAALKTLEGIKGEG--WTAIVADLRGEILLSKGDKQGARAAWEAGVKSDASPA 192
>gi|167587052|ref|ZP_02379440.1| hypothetical protein BuboB_17042 [Burkholderia ubonensis Bu]
Length = 209
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 75/199 (37%), Gaps = 7/199 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNFWQRRQAAQASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
SN AR++ + Y ++ + A +L A GD A + L+ A D
Sbjct: 63 AASNDKATMARAAADMEDKYSGTPYAQMTALAAAKVLYAAGDAAGA-KTQLQWAVDHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPIDAFKGLVADRRGDLLAAQGKADDAR 179
Query: 183 TIFEELAKDNNSPFGISTR 201
+ +LA D+ +S R
Sbjct: 180 AAY-KLALDSLPKEDMSAR 197
>gi|301053723|ref|YP_003791934.1| TPR repeat-containing protein [Bacillus anthracis CI]
gi|300375892|gb|ADK04796.1| TPR repeat-containing protein [Bacillus cereus biovar anthracis
str. CI]
Length = 891
Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 484 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|196046066|ref|ZP_03113294.1| TPR domain protein [Bacillus cereus 03BB108]
gi|229091187|ref|ZP_04222410.1| TPR repeat-containing protein [Bacillus cereus Rock3-42]
gi|196023121|gb|EDX61800.1| TPR domain protein [Bacillus cereus 03BB108]
gi|228692318|gb|EEL46054.1| TPR repeat-containing protein [Bacillus cereus Rock3-42]
Length = 891
Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 484 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|255292048|dbj|BAH90529.1| putative transmembrane protein [uncultured bacterium]
gi|255292516|dbj|BAH89631.1| hypothetical protein [uncultured bacterium]
gi|255293028|dbj|BAH90123.1| hypothetical protein [uncultured bacterium]
Length = 205
Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 10/188 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M + +D + + + + ++ + + L FY G+++ ++
Sbjct: 1 MTTVDDDQIEQLRRLWERYGRATVVVVVAVAVGILGGRFY---GTYQTRQAQQAAALYAT 57
Query: 61 LELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
+ + + A EK+ + Y + A+ V GD + A + VA
Sbjct: 58 YQQPPAGQT--AAELAEKLRGEHPASSYATFAVFDQAAQAVQAGDPQQAVQQLRWVAEHA 115
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
R A L+ A +L+ E + L+ + +P E+ G AL G+ Q
Sbjct: 116 GQ-QTDRGLARLRLARVLLAQGKVAEAASALEHEAVGPSPAR---EELKGDIALAEGRPQ 171
Query: 180 KAKTIFEE 187
+A+ +++
Sbjct: 172 QAREHYQQ 179
>gi|300118063|ref|ZP_07055811.1| TPR domain protein [Bacillus cereus SJ1]
gi|298724374|gb|EFI65068.1| TPR domain protein [Bacillus cereus SJ1]
Length = 891
Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 484 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|218903327|ref|YP_002451161.1| TPR domain protein [Bacillus cereus AH820]
gi|228927271|ref|ZP_04090333.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229121758|ref|ZP_04250979.1| TPR repeat-containing protein [Bacillus cereus 95/8201]
gi|254722186|ref|ZP_05183974.1| TPR domain protein [Bacillus anthracis str. A1055]
gi|218535541|gb|ACK87939.1| TPR domain protein [Bacillus cereus AH820]
gi|228661674|gb|EEL17293.1| TPR repeat-containing protein [Bacillus cereus 95/8201]
gi|228832418|gb|EEM77993.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 891
Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 484 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|167632739|ref|ZP_02391065.1| TPR domain protein [Bacillus anthracis str. A0442]
gi|170686617|ref|ZP_02877838.1| TPR domain protein [Bacillus anthracis str. A0465]
gi|254684775|ref|ZP_05148635.1| TPR domain protein [Bacillus anthracis str. CNEVA-9066]
gi|254743593|ref|ZP_05201278.1| TPR domain protein [Bacillus anthracis str. Kruger B]
gi|167531551|gb|EDR94216.1| TPR domain protein [Bacillus anthracis str. A0442]
gi|170669693|gb|EDT20435.1| TPR domain protein [Bacillus anthracis str. A0465]
Length = 891
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 484 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|262371652|ref|ZP_06064931.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262311677|gb|EEY92762.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 232
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 69/195 (35%), Gaps = 16/195 (8%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M +++ K K I+ +LI +I F+ ++ +K A+
Sbjct: 1 MSLSDEEQLDSLKSFAKKYGSAMISGILIALIA-----FFGWEYWQKKNLAESQNQTAKV 55
Query: 61 LELFNSNK--------LDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEI 111
+L + K + +KI+ D + + +A + K D A +
Sbjct: 56 QKLMDEAKAVAGQPNAFATVSEAADKIVKDDADSVQAIQTQFILAKLAYEKQDYAAAEKA 115
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
KV N + + ++ A + Y+E K L +SEP +E+ G
Sbjct: 116 LKKVENSKVKDAGLMQIVKIRLADSQLAQKKYDEALKTLSNVSEP--AFKATVDELRGDI 173
Query: 172 ALKFGKVQKAKTIFE 186
+ V+ A+ ++
Sbjct: 174 YVAKKDVESARKAYQ 188
>gi|296104192|ref|YP_003614338.1| hypothetical protein ECL_03855 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295058651|gb|ADF63389.1| hypothetical protein ECL_03855 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 206
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 5/175 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K + +IL + +L W Y + + ++ + +++ ++ EK +
Sbjct: 23 KALVVGVILGVGALIGWRYWNNHQADS-ARGASLSYENTVSAIRADQPQT-LTAAEKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ Y L+ + +A + K + AA + ++ L+ A I V
Sbjct: 81 DNKNTYGALAALEVAQQYIDKNELDKAAAQLSQGLAAASDDN-LKAVINLRLARIQVQQK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+E K L + ++ G + L G A+ ++ N SP
Sbjct: 140 KADEALKTLDTIKGEG--FAAIVADLRGEALLSKGDKAGARKAWQAGVDSNASPA 192
>gi|229133038|ref|ZP_04261879.1| TPR repeat-containing protein [Bacillus cereus BDRD-ST196]
gi|228650456|gb|EEL06450.1| TPR repeat-containing protein [Bacillus cereus BDRD-ST196]
Length = 891
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ K K K + +++ + + + K E QA
Sbjct: 484 LTVTHEQREPSAFSKWWKKNKKRTLIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDDKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|311113426|ref|YP_003984648.1| hypothetical protein HMPREF0733_11757 [Rothia dentocariosa ATCC
17931]
gi|310944920|gb|ADP41214.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931]
Length = 447
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
KL+ A +++E++ + Y + I + V +G A E + ++ P A
Sbjct: 276 QGKLEQAITAWERVPESLPERYAS-AQYNIGTSYVEQGKPTKAVEAWERIPASASEPYA- 333
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
A I + + ++ +++ + ++ A +G + K G+ +A ++
Sbjct: 334 --VAQYNTGLIYEEQGNIDDALVAWERVPKDASEHFYKAQFNIGGAYYKLGETDEAVAVW 391
Query: 186 EELAKDNNSPFGISTRSQMILAN--IIASDQRNKK 218
+ + P S + +M N IIA +Q K
Sbjct: 392 KNI------PESASEQYEMAQTNLSIIAENQEKAK 420
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 12/155 (7%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
+ K F + N +D+A +++++ LY + + +
Sbjct: 111 WKNIPSAAPKQYAMAQFNLGVTYAQQNNVDEAIEAYQRVPKDVTNLYAH-AQYNLGATYT 169
Query: 101 AKGDTKNAAEIFLKV--ANDDLAPLAVRYAATLQAASILVDTSS--YEEISKILQKLSEP 156
+G AAE + V A A+ L + +S Y+++ + P
Sbjct: 170 QQGKMDEAAEAYKNVPDAAPAKYAKALNNLGVLYEGQGKAEQASEAYQQV-----PSTVP 224
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+ A LG++ GK ++A ++E ++ D
Sbjct: 225 DQ--YAMALNNLGVTYYNQGKTEQALELWETVSAD 257
>gi|228914800|ref|ZP_04078409.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228845119|gb|EEM90161.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 891
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 484 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|297617492|ref|YP_003702651.1| hypothetical protein Slip_1319 [Syntrophothermus lipocalidus DSM
12680]
gi|297145329|gb|ADI02086.1| Tetratricopeptide TPR_4 [Syntrophothermus lipocalidus DSM 12680]
Length = 722
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 68/177 (38%), Gaps = 15/177 (8%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLD 70
+GKC+ G+ +A L +I + V + A++ + NK D
Sbjct: 4 QGKCQGGRVALLAVAVLFTSLISGCFG----------STEAKVNKQLELAVKYVSENKFD 53
Query: 71 DARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAAT 130
+A +++++++ D + + + + +G A E + + +R
Sbjct: 54 EAVLAYQEVINIDKREVR--AYQGLGKVYTLQGKFDKAQETYDQGIEAVKEEDVMR--LK 109
Query: 131 LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
L A + +D + K +++ + A + L + + G+ ++A + E+
Sbjct: 110 LSLAGMYMDKGDPVQAEKAYKEIIDEDKT-AVEAYQGLAMIYERNGEGEQALAVLEQ 165
>gi|226939616|ref|YP_002794689.1| hypothetical protein LHK_00687 [Laribacter hongkongensis HLHK9]
gi|226714542|gb|ACO73680.1| Putative membrane protein [Laribacter hongkongensis HLHK9]
Length = 211
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 68/185 (36%), Gaps = 11/185 (5%)
Query: 9 SYKGKCKMGKCCY----KWIAPLLILMILSLAIWFYLFDGSHEKKKNIV--GENFAQALE 62
+ + K + KWI+ +I++ L + + + A+
Sbjct: 6 QEQEQIDAAKAFWQQWGKWISLAVIVVALGYLGYQGWKYYRSHQAEQAALLYAPVETAVT 65
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++ KL + + + + Y +++ A + KGDTK A + VA + P
Sbjct: 66 EGDAGKLVASAKALQD--AYPKSGYAARASLLAARVAFDKGDTKTAEQELRWVAGNAAEP 123
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
AV+ A L+ A + +D + L + E+ G + L G Q A+
Sbjct: 124 -AVKAVAQLRLAGLQLDAGQTDAALAELARPI--DATFLPQQLELKGDALLVKGDRQGAR 180
Query: 183 TIFEE 187
++E
Sbjct: 181 VAYQE 185
>gi|258619959|ref|ZP_05714999.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|262172168|ref|ZP_06039846.1| membrane protein [Vibrio mimicus MB-451]
gi|258587692|gb|EEW12401.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261893244|gb|EEY39230.1| membrane protein [Vibrio mimicus MB-451]
Length = 204
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 68/196 (34%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D S + +++QA++
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQD-SVVSAQEAASHSYSQAIDA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ + S I + Y L+ M +A + V G A + A +
Sbjct: 64 LVAKGTEAESSIQTFIDANKETEYAVLAAMQLAKVQVEAGQLDEALAQL-EWAKGATKDV 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A++ T + A + + ++E L + E E+ G ++ G A
Sbjct: 123 ALKPLLTYRVARLQAEQGQFDEALTQLSNIQE--KTWAGRVAELRGDILMRKGDSAGAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + +++ +
Sbjct: 181 AYTEAQQADDASQTLQ 196
>gi|281412533|ref|YP_003346612.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
RKU-10]
gi|281373636|gb|ADA67198.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
RKU-10]
Length = 357
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F N+ D A + E++L D L + + G+ + A E+ K+
Sbjct: 203 FMITEAYHEINRKDLAAKTLERLLKIDPDNIPALYQLSQ--LYRDLGNEEKAKEMEEKIM 260
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N P + A + ++ Y+E+ + L+K+ S+P++ A +L + +K
Sbjct: 261 NCKPKYPTELEPWARV-----MLKHGRYKEVVEELEKI-VESSPLNTLARLLLVVPYVKL 314
Query: 176 GKVQKAKTIFEELAK 190
G++ KA+ I E++ +
Sbjct: 315 GQIDKAREILEDIGQ 329
>gi|196033782|ref|ZP_03101193.1| TPR domain protein [Bacillus cereus W]
gi|228945816|ref|ZP_04108162.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|195993462|gb|EDX57419.1| TPR domain protein [Bacillus cereus W]
gi|228813881|gb|EEM60156.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 891
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 484 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|262195382|ref|YP_003266591.1| hypothetical protein Hoch_2153 [Haliangium ochraceum DSM 14365]
gi|262078729|gb|ACY14698.1| hypothetical protein Hoch_2153 [Haliangium ochraceum DSM 14365]
Length = 581
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ VG+ A+A++L N + D A + ++ L+ L + + + D +A
Sbjct: 42 RQRVGDAVARAVQLGNEGQFDTALAVLDQQLANAPTNQRLL--QQRGILSLERRDFASAL 99
Query: 110 EIFLKV-------ANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
E F ++ AN +R +++ S+ V ++
Sbjct: 100 ESFERLLAAGPRGANRRKVRRIIRDLRHIRSTSVEVQLVPPADV 143
>gi|52425976|ref|YP_089113.1| hypothetical protein MS1921 [Mannheimia succiniciproducens MBEL55E]
gi|52308028|gb|AAU38528.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 204
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 33/110 (30%), Gaps = 1/110 (0%)
Query: 35 LAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY 94
+ + + + + + + Q + F + + E I Y L+
Sbjct: 35 GVFGWRYWQSYQLSQHHQLSDQYQQVIYEFRQDPAAQKDNLAEFIAQNGKSGYAALALFE 94
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
A V K D A + N+ A L+ A++ ++
Sbjct: 95 QAKTAVEKQDFSQAETALKQALNNAP-DEIFASIAALRLANVQFQQKDFD 143
>gi|149176885|ref|ZP_01855495.1| hypothetical protein PM8797T_14082 [Planctomyces maris DSM 8797]
gi|148844322|gb|EDL58675.1| hypothetical protein PM8797T_14082 [Planctomyces maris DSM 8797]
Length = 348
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 49 KKNIVGENFAQALELFNSNKLDD-----ARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
K N ++ A++L ++L A S+F + K Y + A +L+A+G
Sbjct: 143 KANADHFSYYPAMKLLGESQLAKKDYVAANSAFGTVERSPWKDYQMDAKNMKARVLLAQG 202
Query: 104 DTKNAAEIFLKVAN-DDLAPLAVRY--AATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
+TK A F VA D P + AA L +A L ++ K+L ++ + +
Sbjct: 203 NTKGALAAFETVAKMDGKTPGELANKHAAQLGSAICLEKDGKPQDAIKVLDEIIKNVSSS 262
Query: 161 HQFANEILGISALKFGKVQKA 181
+L + LK G +A
Sbjct: 263 QSS---LLAEAYLKKGDCYQA 280
>gi|225848981|ref|YP_002729145.1| Spc97 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644153|gb|ACN99203.1| putative Spc97 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 210
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 72/175 (41%), Gaps = 8/175 (4%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y I ++++L ++ +YL+ +++ ++ L + +K ++AR ++
Sbjct: 30 YLKIILAFVVILLIGSLGYYLYTKKKQEENEKASVYVSKIANLLSEDKKEEARKLIDEFE 89
Query: 81 S--QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+D Y + I++AK + K ++ + + + A + +
Sbjct: 90 KKYKDTNFYKVI---LSYKIMMAKDEGKEDEKLANALK--EKLNTQILEGVKEYTAYLKL 144
Query: 139 DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
++ + +IL+ + + A LG+ K G Q+A+ IF E+ + +
Sbjct: 145 KQNNTNQAKEILKSIDKDKYNY-ISAQATLGLIYKKEGNYQEAEKIFNEIKEKKD 198
>gi|308275079|emb|CBX31678.1| hypothetical protein N47_E51900 [uncultured Desulfobacterium sp.]
Length = 801
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 11/163 (6%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+A+ L K+D A +I+ ++ K ++ ILV+K D A + V
Sbjct: 345 KLFKAIILAQEQKIDQALVLINEIIKENTKDIG--AHTLKGDILVSKRDFPGAIAAYRAV 402
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ + + A + I +KL ++ + A L +
Sbjct: 403 IGEQPGNTDMSS----KLAMVHYLNGEPAIAEDIYKKLLVQNDTLR-SARFGLANIYQRT 457
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
K+ AK + + K N P I + +++ ++ + +K
Sbjct: 458 NKIDMAKEQMQIILKKN--PDDIE--ALVMMGDLEILSKNQRK 496
>gi|229029927|ref|ZP_04185995.1| TPR repeat-containing protein [Bacillus cereus AH1271]
gi|228731354|gb|EEL82268.1| TPR repeat-containing protein [Bacillus cereus AH1271]
Length = 891
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 484 LTITHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 543
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 544 YDDKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 597
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 598 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 656
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 657 EFEKAEDVIVKMSTKTN 673
>gi|120436880|ref|YP_862566.1| hypothetical protein GFO_2543 [Gramella forsetii KT0803]
gi|117579030|emb|CAL67499.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803]
Length = 1006
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 66/175 (37%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL-SNMY 94
A W D ++ + A + +N A ++FEK + + + +N Y
Sbjct: 705 ASWVRNIDFVEVSDADLDNTTYEAAENQYLNNNSAKAIANFEKYIQNFPNGIHSINANFY 764
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
+A + G+ + + + V + + + A L + + Y +L+KL
Sbjct: 765 LAQLYYRDGNVEKSIPNYRYVTSKPKNEFSEQALARLSQIYL--EKKDYTHALPLLEKLE 822
Query: 155 --EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ FA + L S + G KA +++ ++ + +++++A
Sbjct: 823 KQADNEQNVVFAQQNLMKSYFETGNFGKANEYADKVLNNSTAETEARNDARIMVA 877
>gi|268593182|ref|ZP_06127403.1| putative inner membrane protein [Providencia rettgeri DSM 1131]
gi|291311228|gb|EFE51681.1| putative inner membrane protein [Providencia rettgeri DSM 1131]
Length = 207
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 9/167 (5%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKK---NIVGENFAQALELFNSNKLDDARSSFEKILS 81
L++ ++ + ++ K + F S D A ++ +K +
Sbjct: 22 GVALVIGLVIGVGGVFGWNYWQSHKTNVLQESAQKFETVNAQLRSG-SDQAIAAAQKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATLQAASILVDT 140
+ + +Y+ + + +A I V KGD NA +A ++ L+ A + +
Sbjct: 81 ETDDVYSAMMGLELAQIAVDKGDLANAQTALTNALAKAKTVD--MQDLINLRLARVQLAQ 138
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ + + + S A ++ G + L G AK + +
Sbjct: 139 GNADGAIASVANI--KSKSWQATAQDVRGDALLHKGDKAGAKAAYTQ 183
>gi|82703490|ref|YP_413056.1| hypothetical protein Nmul_A2375 [Nitrosospira multiformis ATCC
25196]
gi|82411555|gb|ABB75664.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 212
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 49/132 (37%), Gaps = 2/132 (1%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y + +++ + ++ ++ ++K E + L++ S + ++
Sbjct: 22 YGTLVIVIVAVFIAGIAGAQAWNYYKKQKTEQALELYDSVLQVQGSGDAKKISDAAGLVM 81
Query: 81 SQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
Y + + A GD +N V D+ ++ A L+ +L+D
Sbjct: 82 ESFPSSGYASRAALISAQASFNAGDLQNTKNRLQWVL-DNSGEEELKDMARLRLTGVLLD 140
Query: 140 TSSYEEISKILQ 151
Y+E ++L+
Sbjct: 141 EEKYDEALRLLE 152
>gi|52143251|ref|YP_083579.1| TPR repeat-containing protein [Bacillus cereus E33L]
gi|51976720|gb|AAU18270.1| conserved hypothetical protein; TPR-repeat domains [Bacillus cereus
E33L]
Length = 891
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 11/184 (5%)
Query: 14 CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
K K I + +++ + + + K E QA + K ++A
Sbjct: 497 STWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQAYDDKKYTKAEEAV 556
Query: 74 SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
+ +D + + +A+I VA+G K A + K+ D AA L A
Sbjct: 557 GHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLA 610
Query: 134 ASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
++ Y+E + ++ ++ P + A L +S +K + +KA+ + +++
Sbjct: 611 SA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMKEFEKAEDVIVKMS 669
Query: 190 KDNN 193
N
Sbjct: 670 TKTN 673
>gi|301154678|emb|CBW14141.1| conserved protein [Haemophilus parainfluenzae T3T1]
Length = 204
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 62/195 (31%), Gaps = 11/195 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + N K + K K I IL + + W Y + E +
Sbjct: 5 IEEEQELNQLK---EWWKDNGKTIIAAFILGVGGMLGWRYWQSYQANQIMQASAE-YDAL 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ N + E + + D Y S + A VAK D +A +
Sbjct: 61 VYTANKDAAAQQAKVAEFVKAHDKTSYAVFSLLDEAKGFVAKQDYASAENSLKQAIAQSQ 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFGKV 178
+ A L+ +++ ++ L ++ A + L G + G V
Sbjct: 121 DD-ILTSLAALRLSAVQFQQGQFDAALASLNQVKSQG----FSARKDLLAGDIQVAKGDV 175
Query: 179 QKAKTIFEELAKDNN 193
AK FE K+ N
Sbjct: 176 NGAKASFENAQKNGN 190
>gi|54307960|ref|YP_128980.1| hypothetical protein PBPRA0765 [Photobacterium profundum SS9]
gi|46912386|emb|CAG19178.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 203
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 3/172 (1%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L ++ L + + G + K + + ++Q + +S + I + ++
Sbjct: 25 VVLGAVIGLGGLYGWRYYQGEVQTTKELTSDAYSQVMTTLDSGSENAVADVQAFISANES 84
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y+ L+ + +A V D A + + A+ A + A I + ++
Sbjct: 85 SQYSVLAALQLAKTQVELSDLDGAIKQLTWAISQTK-DQAILPLAQTRLARIYAEQQKFD 143
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
E L K++ E+ G L G V A+ + + SP
Sbjct: 144 EALAELDKVTA--TSWQSKIAELRGDILLLKGDVIAARKAYISAQQLGASPA 193
>gi|167856484|ref|ZP_02479200.1| hypothetical protein HPS_02663 [Haemophilus parasuis 29755]
gi|167852393|gb|EDS23691.1| hypothetical protein HPS_02663 [Haemophilus parasuis 29755]
Length = 206
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 47/156 (30%), Gaps = 2/156 (1%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ ++ K I + L+ + W Y E ++ Q +E +
Sbjct: 9 EEQQFEEAKSWFKENGTPIVVAIFLVAAATFGWNYWQKHQIEV-AQTTSASYQQVMESYL 67
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
N +A + I + Y + + A KGD + + + +
Sbjct: 68 QNPEKNAPLVQKFIAENKDSSYAVFAQLEEAKQAADKGDFATTKTLLTQ-SLGSTTDATL 126
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+ + A++ ++ L ++ + +
Sbjct: 127 QNVIRFRLATVDYQLKEFDAALATLSQIKDTAWDFR 162
>gi|33593201|ref|NP_880845.1| hypothetical protein BP2197 [Bordetella pertussis Tohama I]
gi|33563576|emb|CAE42475.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382612|gb|AEE67459.1| hypothetical protein BPTD_2163 [Bordetella pertussis CS]
Length = 212
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 8/204 (3%)
Query: 12 GKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFAQALELFNSNKL 69
+ + I L L++L+ W + + +G E A L ++
Sbjct: 14 IRAWWARYGTL-ILTLATLVVLAWGGWSGWKAYQNYRANQAMGYFEALEDAARLGGADAA 72
Query: 70 DDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+++ + + Y + A L ++ D A E +A LA++
Sbjct: 73 TRIKAAAATLRTDYPATGYAGRGALIAAQALQSQQDVDGAREQLEWLAAQAKQ-LALQPV 131
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A L+ A IL+D Y+ L +L+ P + G GK +A+ ++
Sbjct: 132 ARLRLAGILLDQKQYD---AALAQLNNPPASFAALFADRRGDVLAAQGKRDEARAAWQSA 188
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+ ++ Q+ L + +
Sbjct: 189 IDGLGTSNPLTQVVQLKLDALSGA 212
>gi|83941779|ref|ZP_00954241.1| thioredoxin [Sulfitobacter sp. EE-36]
gi|83847599|gb|EAP85474.1| thioredoxin [Sulfitobacter sp. EE-36]
Length = 306
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 42/139 (30%), Gaps = 6/139 (4%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
E + E A A ++ DA +F IL +D M A I + + D
Sbjct: 128 EAPGEELSEAVAAADDMLAEGATQDALDTFAAILGEDPNHAGAYCGMVRAYIALDQLDQA 187
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A + AP A LQ A D E+ + +NP A
Sbjct: 188 EA-HLNGAPIEISKAPELEAAHAQLQLARQAADAGPVAELQA-----AVDANPDDMQARF 241
Query: 167 ILGISALKFGKVQKAKTIF 185
L + G Q A
Sbjct: 242 DLAQALYAHGDTQAAVDQL 260
>gi|219871011|ref|YP_002475386.1| hypothetical protein HAPS_0802 [Haemophilus parasuis SH0165]
gi|219691215|gb|ACL32438.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 206
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 47/156 (30%), Gaps = 2/156 (1%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ ++ K I + L+ + W Y E ++ Q +E +
Sbjct: 9 EEQQFEEAKSWFKENGTPIVVAIFLVAAATFGWNYWQKHQIEV-AQTTSASYQQVMESYL 67
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
N +A + I + Y + + A KGD + + + +
Sbjct: 68 QNPEKNAPLVQKFIAENKDSSYAVFAQLEEAKQAADKGDFATTKTLLTQ-SLGSTTDATL 126
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+ + A++ ++ L ++ + +
Sbjct: 127 QNVIRFRLATVDYQLKEFDAALATLSQIKDTAWDFR 162
>gi|217972555|ref|YP_002357306.1| hypothetical protein Sbal223_1375 [Shewanella baltica OS223]
gi|217497690|gb|ACK45883.1| conserved hypothetical protein [Shewanella baltica OS223]
Length = 206
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 7/190 (3%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN 67
++ + + K +K + + Y ++ + K E ++A +
Sbjct: 5 STEEQQVDAIKQFWKDYGTSIFIGAFVGLGGLYAWNYYSDVKVAQAEEA-SKAFHELTTK 63
Query: 68 KLDDA--RSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
D+A + + D K Y L + +A V D A E KV
Sbjct: 64 SSDEAAMLAGVAEFSKSHDQKGYQALLELIVAKTAVEAKDYSKAIEALNKVIAAKP-GAG 122
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ ATL+ A I + + L +++ +E+ G ++ G+V+KAKT
Sbjct: 123 LDVIATLRVARIQAEQGQIDAALATLDQVT--DKAFFAQRDELKGDFLVRQGEVEKAKTA 180
Query: 185 FEELAKDNNS 194
++ +
Sbjct: 181 YQAAMDNGGV 190
>gi|304410033|ref|ZP_07391652.1| Protein of unknown function DUF2133 [Shewanella baltica OS183]
gi|307302254|ref|ZP_07582012.1| Protein of unknown function DUF2133 [Shewanella baltica BA175]
gi|304351442|gb|EFM15841.1| Protein of unknown function DUF2133 [Shewanella baltica OS183]
gi|306914292|gb|EFN44713.1| Protein of unknown function DUF2133 [Shewanella baltica BA175]
Length = 206
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 7/190 (3%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN 67
++ + + K +K +++ + Y ++ + K E ++A +
Sbjct: 5 STEEQQVDAIKQFWKDYGNSILIGAVVGLGGLYAWNYYSDVKVAQAEEA-SKAFHELTTK 63
Query: 68 KLDDA--RSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
D+A + + D K Y L + +A V D A E KV
Sbjct: 64 SADEAAMLAGVAEFSKSHDQKGYQALLELIVAKTAVEAKDYPKAIEALNKVIAAKP-GAG 122
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ ATL+ A I + + L +++ +E+ G ++ G+V+KAKT
Sbjct: 123 LDVIATLRVARIQAEQGQIDAALATLDQVT--DKAFFAQRDELKGDFLVRQGEVEKAKTA 180
Query: 185 FEELAKDNNS 194
++ +
Sbjct: 181 YQAAMDNGGV 190
>gi|89890624|ref|ZP_01202134.1| conserved hypothetical protein, TPR domain [Flavobacteria bacterium
BBFL7]
gi|89517539|gb|EAS20196.1| conserved hypothetical protein, TPR domain [Flavobacteria bacterium
BBFL7]
Length = 1006
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 57/191 (29%), Gaps = 34/191 (17%)
Query: 35 LAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY 94
A W+ D S +K F L S K ++A+ ++ D+ Y + Y
Sbjct: 121 AAKWYEKVDESTLSRKQQSRYYFNTGYTLVQSKKYEEAKPYLNRV--SDDPEYGSQAKYY 178
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVR-------------YAATLQA-------- 133
+ I + + A+++F + + A A
Sbjct: 179 LGYIAYEGDEYQEASDLFDEAGESPDEDEKLSYYQADLNYKLGNFDKAIALATEQLPKST 238
Query: 134 -----------ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
L + Y++ L++ ++ LG + K G +KA
Sbjct: 239 KKEQSELNRIIGQSLFNQGKYDQALPYLEEYKGVRGRLNNNDYYQLGYAYYKQGDFEKAI 298
Query: 183 TIFEELAKDNN 193
F ++ N
Sbjct: 299 ETFNKIVDGEN 309
>gi|325577798|ref|ZP_08148073.1| chaperone HscA [Haemophilus parainfluenzae ATCC 33392]
gi|325160543|gb|EGC72669.1| chaperone HscA [Haemophilus parainfluenzae ATCC 33392]
Length = 204
Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 11/195 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + N K + K K I IL + + W Y + E +
Sbjct: 5 IEEEQELNQLK---EWWKDNGKTIIAAFILGVGGMLGWRYWQSYQANQIMQASAE-YDAL 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ N + E + + D Y S + A VAK D +A +
Sbjct: 61 VYTTNKDAAAQQAKMAEFVKAHDKTSYAVFSLLDEAKGFVAKQDYASAENSLKQAIAQSQ 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFGKV 178
+ A L+ +++ ++ L ++ A + L G + G V
Sbjct: 121 DD-ILTSLAALRLSAVQFQQGQFDAALASLNQVKSQG----FSARKDLLAGDIQIAKGDV 175
Query: 179 QKAKTIFEELAKDNN 193
AK FE K N
Sbjct: 176 NGAKASFENAQKSGN 190
>gi|158522425|ref|YP_001530295.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511251|gb|ABW68218.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 589
Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-D 118
A L ++D+A + + + LS D + +N+ A + GD + AA F + D
Sbjct: 433 ADTLLEKGRIDEAIAFYRQALSMDPENALVHNNLGAAFLKA--GDRQRAAAGFRQALKYD 490
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
P+A ++LV+ +E +K P NP A+ + + + G+
Sbjct: 491 PGHPMAGNNL-----GNLLVEMGRTDEAIACFEKTLTPDNPFLYKAHNNIATAFARKGEF 545
Query: 179 QKAK 182
KA
Sbjct: 546 DKAV 549
>gi|83855257|ref|ZP_00948787.1| thioredoxin [Sulfitobacter sp. NAS-14.1]
gi|83843100|gb|EAP82267.1| thioredoxin [Sulfitobacter sp. NAS-14.1]
Length = 306
Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 42/139 (30%), Gaps = 6/139 (4%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
E + E A A ++ DA +F IL +D M A I + + D
Sbjct: 128 EAPGEELSEAVAAADDMLAEGAAQDALDTFAAILGEDPNHAGAYGGMVRAYIALDQLDQA 187
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A + AP A LQ A D E+ + +NP A
Sbjct: 188 EA-HLNGAPIEISKAPELEAAHAQLQLARQAADAGPVAELQA-----AVDANPNDMQARF 241
Query: 167 ILGISALKFGKVQKAKTIF 185
L + G Q A
Sbjct: 242 DLAQALYAHGDTQAAVDQL 260
>gi|228985300|ref|ZP_04145463.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228774455|gb|EEM22858.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 891
Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 69/184 (37%), Gaps = 11/184 (5%)
Query: 14 CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
K K I + ++ + + + K E QA + K ++A
Sbjct: 497 STWWKKNKKRILIIGSTAVVVIGGSTLFYFYTTNAKYQKFMEQARQAYDDKKYTKAEEAV 556
Query: 74 SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
+ +D + + +A+I VA+G K A + K+ D AA L A
Sbjct: 557 GQAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLA 610
Query: 134 ASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
++ Y+E + ++ ++ P + A L +S +K + +KA+ + +++
Sbjct: 611 SA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMKEFEKAEDVIVKMS 669
Query: 190 KDNN 193
N
Sbjct: 670 TKTN 673
>gi|323698093|ref|ZP_08110005.1| protein of unknown function DUF181 [Desulfovibrio sp. ND132]
gi|323458025|gb|EGB13890.1| protein of unknown function DUF181 [Desulfovibrio desulfuricans
ND132]
Length = 575
Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 5/139 (3%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L D+A + + Y L + + GD AA F + + A
Sbjct: 400 LAEDADFDEALEGLDVLEEIYPGAY-FLPFFR-GLLALRMGDPLYAAACFEESVDLQPAD 457
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
R A A L ++EE ++L + +F N + G++ K G+ + A
Sbjct: 458 AE-RGLAVFYQAYALSQMEAWEETVELLDRAVSLDRECREFFN-LRGVAHFKGGRYELAA 515
Query: 183 TIF-EELAKDNNSPFGIST 200
F L D+ SP ++
Sbjct: 516 EDFKASLDIDSGSPHDLAN 534
>gi|229155791|ref|ZP_04283897.1| TPR repeat-containing protein [Bacillus cereus ATCC 4342]
gi|228627777|gb|EEK84498.1| TPR repeat-containing protein [Bacillus cereus ATCC 4342]
Length = 891
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 69/184 (37%), Gaps = 11/184 (5%)
Query: 14 CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
K K I + ++ + + + K E QA + K ++A
Sbjct: 497 STWWKKNKKRILIIGSTAVVVIGGSTLFYFYTTNAKYQKFMEQARQAYDDKKYTKAEEAV 556
Query: 74 SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
+ +D + + +A+I VA+G K A + K+ D AA L A
Sbjct: 557 GQAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLA 610
Query: 134 ASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
++ Y+E + ++ ++ P + A L +S +K + +KA+ + +++
Sbjct: 611 SA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMKEFEKAEDVIVKMS 669
Query: 190 KDNN 193
N
Sbjct: 670 TKTN 673
>gi|83644117|ref|YP_432552.1| thioredoxin domain-containing protein [Hahella chejuensis KCTC
2396]
gi|83632160|gb|ABC28127.1| Thioredoxin domain-containing protein [Hahella chejuensis KCTC
2396]
Length = 287
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 9/157 (5%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
QA L + A + + D L ++ A++ VA G+ A+ I +
Sbjct: 121 EQARALVEQGQAAQALAMLTEANQADPNNMEILVDI--AAVKVALGEKDEASTILSSLPA 178
Query: 118 D-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
D P + A ++ + +I + LQ + + A L + A+
Sbjct: 179 DIQGRPDVKQLLARIRFVEKAGAIAPLADIQQRLQANAADAE-----ARFQLALHAIMNN 233
Query: 177 KVQKAKT-IFEELAKDNNSPFGISTRSQMILANIIAS 212
K + A + + D + + ++ + L +++ +
Sbjct: 234 KFEDAVEALLNLMQTDRSYGDDAARKTLIELFDMLGA 270
>gi|303256839|ref|ZP_07342853.1| tetratricopeptide repeat protein [Burkholderiales bacterium 1_1_47]
gi|330998914|ref|ZP_08322641.1| tetratricopeptide repeat protein [Parasutterella excrementihominis
YIT 11859]
gi|302860330|gb|EFL83407.1| tetratricopeptide repeat protein [Burkholderiales bacterium 1_1_47]
gi|329576128|gb|EGG57647.1| tetratricopeptide repeat protein [Parasutterella excrementihominis
YIT 11859]
Length = 389
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 12/148 (8%)
Query: 27 LLILMILSLAIWF-YLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L+++ +L A WF FD ++ + + ++L SNK D A +F ++ D
Sbjct: 8 LILVPLLFAAGWFARSFDIKEKQTIANEKDTLYKGVDLLLSNKQDQAIDAFINLVKLDPD 67
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
+ +A + +G+ A +I + N + P +R +A L +
Sbjct: 68 TVEM--HFSLAGLFRRRGEFDRAIKIHNVLVNREDLPKKIRS----RALYELGEDYLKAG 121
Query: 146 ISKILQK----LSEPSNPMHQFAN-EIL 168
+ ++ LS+ S A E+L
Sbjct: 122 LWDRAEECFLKLSDTSESYKTIARKELL 149
>gi|225864173|ref|YP_002749551.1| TPR domain protein [Bacillus cereus 03BB102]
gi|225789433|gb|ACO29650.1| tetratricopeptide repeat protein [Bacillus cereus 03BB102]
Length = 891
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE-KILSQ 82
I +++I ++++ + +K QA + ++ K A + I +
Sbjct: 510 IGSAAVVVIGGSTLFYFYTTNAKYQKF------MEQARQAYDDKKYTKAEEAVGHAIAVK 563
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
+ + +A+I VA+G K A + K+ D AA L A++
Sbjct: 564 G----KDEAYLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLASA-NFRIGK 618
Query: 143 YEEISKILQKL----SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
Y+E + ++ ++ P + A L +S +K + +KA+ + +++ N
Sbjct: 619 YQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMKEFEKAEDVIVKMSTKTN 673
>gi|229587866|ref|YP_002869985.1| cellulose synthase operon protein C [Pseudomonas fluorescens SBW25]
gi|22001533|sp|P58937|BCSC_PSEFS RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
gi|18535635|gb|AAL71845.1| WssE [Pseudomonas fluorescens]
gi|229359732|emb|CAY46581.1| cellulose synthase operon protein C precursor [Pseudomonas
fluorescens SBW25]
Length = 1279
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 12/152 (7%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G A A N+ DDA + + K+L++ + LS + ++L G A ++
Sbjct: 385 GAAIALAGFQAQDNQFDDAEAGYRKVLARHPGDPDALSGLI--NVLSQSGQPDEALKLID 442
Query: 114 KVA-NDDLAPLAVRYAATLQAASILVDTSSYEEISK-----ILQKLSEPSNPMHQFANEI 167
V+ L+A + ++ ++P NP +FA
Sbjct: 443 SVSPAQRAKFAPSVKINALRATQVGKLAEQRGDLKAAQAAYRQALDADPENPWTRFA--- 499
Query: 168 LGISALKFGKVQKAKTIFEELAKD-NNSPFGI 198
L L+ G+++ A+ + + L K N P +
Sbjct: 500 LARMYLRDGQIRNARALIDGLLKSQPNQPDAL 531
>gi|298709901|emb|CBJ26241.1| putative methyltransferase [Ectocarpus siliculosus]
Length = 1611
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 11/169 (6%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY---NPLSNMYIASILVAKGDTKN 107
+ A+ L + ++AR ++L + + + +A + GD
Sbjct: 328 SDASVALEVAVALHRLGRTEEARGRLTEVLEMEGGQHGTTRDFARSNLAVLKQESGDIPG 387
Query: 108 AAEIFLKVANDDLAP-LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A E + V + +A+ A D +L+K S +P
Sbjct: 388 AIEGYRAVLAESPKNCVALNNLGVALLALGQQDEG-----LSMLEK-SFELDPFEPDVLV 441
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
LGI + G + +A++ + A+ G+ R ++L I+A ++
Sbjct: 442 NLGIHWQEDGDLDRARSFYTR-AERLRRNDGLPVRRAIMLQPIMAGERE 489
>gi|126175190|ref|YP_001051339.1| hypothetical protein Sbal_2988 [Shewanella baltica OS155]
gi|125998395|gb|ABN62470.1| conserved hypothetical protein [Shewanella baltica OS155]
Length = 206
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 7/190 (3%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN 67
++ + + K + +++ + Y ++ + K E ++A +
Sbjct: 5 STEEQQVDAIKQFWTDYGNSILIGAVVGLGGLYAWNYYSDVKVAQAEEA-SKAFHELTTK 63
Query: 68 KLDDA--RSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
D+A + + D K Y L + +A V D A E KV
Sbjct: 64 SADEAAMLAGVAEFSKSHDQKGYQALLELIVAKTAVEAKDYPKAIEALNKVIAAKP-GAG 122
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ ATL+ A I + + L +++ +E+ G ++ G+V+KAKT
Sbjct: 123 LDVIATLRVARIQAEQGQIDAALATLDQVT--DKAFFAQRDELKGDFLVRQGEVEKAKTA 180
Query: 185 FEELAKDNNS 194
++ +
Sbjct: 181 YQAAMDNGGV 190
>gi|78484968|ref|YP_390893.1| hypothetical protein Tcr_0623 [Thiomicrospira crunogena XCL-2]
gi|78363254|gb|ABB41219.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2]
Length = 213
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 76/214 (35%), Gaps = 14/214 (6%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
++ K K + ++ +L+ ++L+ W Y + K N ++
Sbjct: 7 DEEQVEAIKSWWKKNGTQLLSGILV-IVLAWTGWTYWQNTQTTKALNASAVFEVMQVKQS 65
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ D R + + Q + Y + IA + A E + +
Sbjct: 66 QNALGDVLRDGLKLMEEQPDSPYASGVALMIAKHYFDEKAFDKAIENYQWTIEHAP-DHS 124
Query: 125 VRYAATLQAASILVDTSSYEE-------ISKILQKLSEPSNPMHQFANEILGISALKFGK 177
++ A L+ ++ V +E+ + + L+E N Q A AL G
Sbjct: 125 IQLIARLRLVTVYVQEKMFEKADQVLAGVDQKALSLAEKGNYDFQVAE-----LALTEGD 179
Query: 178 VQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
+ +AK + + + +P + +++ LA++
Sbjct: 180 LSQAKEAYNRVISNAEAPESVQNLARLKLADLAG 213
>gi|52841773|ref|YP_095572.1| transmembrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52628884|gb|AAU27625.1| transmembrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 224
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 67/178 (37%), Gaps = 6/178 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ K + Y + + + ++L + + + ++K K + + F
Sbjct: 7 EEEQLEIIKKWWKR--YGNMITIFLSIMLLIIAGYRYMNWHNDKIKQQASIAYENMMIAF 64
Query: 65 NSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ + RS +++ ++ +Y +++M +A I V K + A VA+ +
Sbjct: 65 SNQNIKSVRSYANELIKNYNHTVYADIAHMTLAKIYVNKNKLEQARNELKAVAS-ESQMT 123
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A ++ A +L +Y L + NE+ G G+ Q A
Sbjct: 124 PLRQIAKIRIARLLAADKAYTNALNELS--AVEDEAYLPVINELKGDIYSAKGQYQDA 179
>gi|291613142|ref|YP_003523299.1| hypothetical protein Slit_0672 [Sideroxydans lithotrophicus ES-1]
gi|291583254|gb|ADE10912.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 345
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 9/119 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
++ A +LF + A L+ K + + I +G+T +A +
Sbjct: 23 AQADDLQDANKLFKQGEHAQAMEKVNAYLATKPK--DAQARFLKGLIFAEQGNTTDAITV 80
Query: 112 FLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
F + D P A L A YE+ + L+ ++ +NP + A+E LG
Sbjct: 81 FNNLTQDYPELPEPYNNLAVLYAGQ-----GQYEKAKEELE-MAIRTNPSYATAHENLG 133
>gi|148359077|ref|YP_001250284.1| transmembrane protein [Legionella pneumophila str. Corby]
gi|296107125|ref|YP_003618825.1| putative protein conserved in bacteria [Legionella pneumophila
2300/99 Alcoy]
gi|148280850|gb|ABQ54938.1| transmembrane protein [Legionella pneumophila str. Corby]
gi|295649026|gb|ADG24873.1| putative protein conserved in bacteria [Legionella pneumophila
2300/99 Alcoy]
Length = 224
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 68/178 (38%), Gaps = 6/178 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ K + Y + + + ++L + + + ++K K + + F
Sbjct: 7 EEEQLEIIKKWWKR--YGNMITIFLSIMLLIIAGYRYMNWHNDKIKQQASIAYENMMIAF 64
Query: 65 NSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ + RS +++ ++ +Y +++M +A I V+K + A VA+ +
Sbjct: 65 SNQNIKSVRSYANELIKNYNHTVYADIAHMTLAKIYVSKNKLEQARNELKAVAS-ESQMT 123
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+R A ++ A +L +Y L + NE+ G G+ Q A
Sbjct: 124 PLRQIAKIRIARLLAADKAYTNALNELS--AVEDEAYLPVINELKGDIYSAKGQYQDA 179
>gi|118477622|ref|YP_894773.1| TPR repeat-containing protein [Bacillus thuringiensis str. Al
Hakam]
gi|229184430|ref|ZP_04311637.1| TPR repeat-containing protein [Bacillus cereus BGSC 6E1]
gi|118416847|gb|ABK85266.1| TPR-repeat containing protein [Bacillus thuringiensis str. Al
Hakam]
gi|228599226|gb|EEK56839.1| TPR repeat-containing protein [Bacillus cereus BGSC 6E1]
Length = 891
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE-KILSQ 82
I +++I ++++ + +K QA + ++ K A + I +
Sbjct: 510 IGSAAVVVIGGSTLFYFYTTNAKYQKF------MEQARQAYDDKKYTKAEEAVGHAIAVK 563
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
+ + +A+I VA+G K A + K+ D AA L A++
Sbjct: 564 G----KDEAYLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLASA-NFRIGK 618
Query: 143 YEEISKILQKL----SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
Y+E + ++ ++ P + A L +S +K + +KA+ + +++ N
Sbjct: 619 YQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMKEFEKAEDVIVKMSTKTN 673
>gi|113969574|ref|YP_733367.1| hypothetical protein Shewmr4_1230 [Shewanella sp. MR-4]
gi|114046807|ref|YP_737357.1| hypothetical protein Shewmr7_1301 [Shewanella sp. MR-7]
gi|113884258|gb|ABI38310.1| conserved hypothetical protein [Shewanella sp. MR-4]
gi|113888249|gb|ABI42300.1| conserved hypothetical protein [Shewanella sp. MR-7]
Length = 206
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 61/193 (31%), Gaps = 8/193 (4%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQ-AL 61
S + K + ++ + L W Y D K + F
Sbjct: 5 STEEQQVDAIKQFWKDYGTSIVIG-AVVGLGGLYGWNYYSD-MKIVKAEEASQAFQTLTT 62
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + + + F K + D K Y L ++ +A V D A E KV
Sbjct: 63 KSSDEAAMLAGVAEFSK--NHDQKGYQALLDLIVAKTAVEAKDFPKAEEALKKVIAAKP- 119
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ ATL+ A I + L +++ E+ G ++ G+ KA
Sbjct: 120 GAGLDTVATLRLARIQAEQGQIGTALATLDQVT--DKAFLAQREELKGDFFVRQGEADKA 177
Query: 182 KTIFEELAKDNNS 194
KT ++ +
Sbjct: 178 KTAYQAAMDNGGV 190
>gi|329897035|ref|ZP_08271807.1| membrane protein [gamma proteobacterium IMCC3088]
gi|328921475|gb|EGG28861.1| membrane protein [gamma proteobacterium IMCC3088]
Length = 227
Score = 44.6 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 7/136 (5%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS-SFEKILSQ 82
+ +++ +L W D + + + L L DA +++ +
Sbjct: 25 VIAAVVIGVLGSVGWQSWQD-RQVSQAEAASGIYQELLALSAQELSSDADKVRLDELTAT 83
Query: 83 -----DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
Y L + S V++G + A + + +A+ L+ A +
Sbjct: 84 LTEDYAGTGYARLGQLLQVSAWVSQGRAEEALTALQALESSVADDVAMYPIVKLRRARLQ 143
Query: 138 VDTSSYEEISKILQKL 153
E+ + L L
Sbjct: 144 ASLGDTEQALQALTSL 159
>gi|157964298|ref|YP_001499122.1| hypothetical protein RMA_0319 [Rickettsia massiliae MTU5]
gi|157844074|gb|ABV84575.1| hypothetical protein RMA_0319 [Rickettsia massiliae MTU5]
Length = 221
Score = 44.6 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 66/171 (38%), Gaps = 6/171 (3%)
Query: 48 KKKNIVGENFAQALELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
K G+ + + L + ++ ++ E +++ N ++ + +I +++
Sbjct: 51 KNNQKNGDILVKTVGLKTTKDNEELVFNTLENLVTTSNTKIKEIAALAQVAIKISEKKYS 110
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-----EISKILQKLSEPSNPMH 161
A ++ K+ + A + +++D + + +++K L + P
Sbjct: 111 EAKDLLNKIIENKEYSEISTSYARISWCGLVIDDQNLDIQDKEKLTKYLNYFDDEKKPFW 170
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A I + +K +A+ + L NN I +++ +L N+ S
Sbjct: 171 ATATIIKAMWDIKNNMKPQAEKNLKNLLISNNVSDLIKDQAKALLVNLNKS 221
>gi|117919680|ref|YP_868872.1| hypothetical protein Shewana3_1231 [Shewanella sp. ANA-3]
gi|117612012|gb|ABK47466.1| conserved hypothetical protein [Shewanella sp. ANA-3]
Length = 206
Score = 44.6 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 61/193 (31%), Gaps = 8/193 (4%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQ-AL 61
S + K + ++ + L W Y D K + F
Sbjct: 5 STEEQQVDAIKQFWKDYGTSIVIG-AVVGLGGLYGWNYYSDMK-IVKAEEASQAFQTLTT 62
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ + + + F K + D K Y L ++ +A V D A E KV
Sbjct: 63 KSSDEAAMLAGVAEFSK--NHDQKGYQALLDLIVAKTAVEAKDFAKAEEALKKVIAAKP- 119
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ ATL+ A I + L +++ E+ G ++ G+ KA
Sbjct: 120 GAGLDTVATLRLARIQAEQGQIGTALATLDQVT--DKAFLAQREELKGDFFVRQGEADKA 177
Query: 182 KTIFEELAKDNNS 194
KT ++ +
Sbjct: 178 KTAYQAAMDNGGV 190
>gi|218885715|ref|YP_002435036.1| hypothetical protein DvMF_0611 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756669|gb|ACL07568.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 231
Score = 44.6 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 74/195 (37%), Gaps = 10/195 (5%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
++IA L +++L+ + +K + + + +++L + E L+
Sbjct: 43 RYIAAGLGVLVLAAGAGAGYRWWAADKAREAQADLGMITVTKTGADRLQ----ALEAFLT 98
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ + +A+ + + D AA + ++A A A+ A + A L
Sbjct: 99 KAPSGVRNAVLLDLAAAAMEQKDYDKAASAWERLAA---ADGAIGVVARIGRAQALSQAG 155
Query: 142 SYEEISKILQKLSEPSNPM-HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG--I 198
E +L+ L + + L + A + GK+ +A +E+L ++
Sbjct: 156 KDAEALTVLEGLESSVSEISRNAVRGQLAVVAERAGKLDRAVAAYEQLMASESAGNKDYF 215
Query: 199 STRSQMILANIIASD 213
+R++ + A +
Sbjct: 216 KSRAEALKARMQKGG 230
>gi|225848002|ref|YP_002728165.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644404|gb|ACN99454.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 921
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 69/174 (39%), Gaps = 15/174 (8%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELF---NSNKLDDARSSFEKILSQDNKLYNP 89
L+ +I+ + ++K E A L + + E + Y
Sbjct: 606 LARSIYKEFIEKYKDRK-----EAVDAAYNLVLLETKGENQEKDKIIEDFI-SKYPDYPL 659
Query: 90 L--SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
+ + +ASI KG+ + A +I+ +++N + + A + A I + ++
Sbjct: 660 VNTLKLQLASIYEEKGEIEKAIKIYQQLSNSNDKDSLL---AKYKLAEIYEKSGQNDKAK 716
Query: 148 KILQKLSEP-SNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+IL + + ++ +L K + +A I++ ++ +++ F +ST
Sbjct: 717 EILLNIINSQDQDIRFKSSLLLAQIYEKESNLDQAIQIYQSISDNDDVKFKLST 770
>gi|197285698|ref|YP_002151570.1| hypothetical protein PMI1843 [Proteus mirabilis HI4320]
gi|227356209|ref|ZP_03840598.1| tetratricopeptide TPR_4 [Proteus mirabilis ATCC 29906]
gi|194683185|emb|CAR43823.1| putative membrane protein [Proteus mirabilis HI4320]
gi|227163673|gb|EEI48589.1| tetratricopeptide TPR_4 [Proteus mirabilis ATCC 29906]
Length = 206
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
I +++ + + W Y + + GE + + + + EK +S+
Sbjct: 25 IILAIVIGVGGIWGWKYWQSHQANRLQESAGE--FATINEALTKPTPENIALAEKFVSET 82
Query: 84 NKLYNPLSNMYIASILVAKGDTKNA----AEIFLKVANDDLAPLAVRYAATLQAASILVD 139
N +Y L+++ +A + + D + V N+ A + A +Q A D
Sbjct: 83 NDIYGALASLELAQLAIDANDLAKGETHLTKAISMVKNEAFADMLNLRLARVQLALDKTD 142
Query: 140 TS--SYEEISKI 149
+ S E++
Sbjct: 143 AALISLEQVKSK 154
>gi|237800046|ref|ZP_04588507.1| hypothetical protein POR16_14512 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022901|gb|EGI02958.1| hypothetical protein POR16_14512 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 213
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 58/164 (35%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W G + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQGWQRYQAGQSQGASMLYQQLLETALTPSGQADTARVAELSGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +AA VA D A + A + A ++ +
Sbjct: 87 GTTYAQFGSLFVAKVAVDAGKLDDAAAELKTVA-DKPANDTLGEVARQRLARVMAAQNKV 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G ++ G+ +A +++
Sbjct: 146 DDALKLLDGDA--DKAFLASREELKGDLLVQLGRTDEAHAAYQK 187
>gi|332290666|ref|YP_004429275.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
diaphorus 4H-3-7-5]
gi|332168752|gb|AEE18007.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
diaphorus 4H-3-7-5]
Length = 1006
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 4/131 (3%)
Query: 64 FNSNKLDDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DLA 121
+ NK D A ++++K++ Y + + A IL K + A + KVA D
Sbjct: 623 VSQNKNDQAITAYDKLVRDLPGSSYVSKAMLKKALILDNKNKSDEALALLRKVAGDYPGT 682
Query: 122 PLAVRYAATLQAASILVDTSS-YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
P A++ T + I + Y + L + + A V +
Sbjct: 683 PEALQAVTTAKLIYIDLGRVDEYGQWVSTLDFIDVEDAELDDAAY-ASAEKQYVENNVGQ 741
Query: 181 AKTIFEELAKD 191
A+ +FE D
Sbjct: 742 AERLFESYLSD 752
>gi|320095711|ref|ZP_08027365.1| hypothetical protein HMPREF9005_1977 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319977361|gb|EFW09050.1| hypothetical protein HMPREF9005_1977 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 834
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 68/165 (41%), Gaps = 23/165 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNP------LSNMYIASILVAKGDTKNAAEIFL 113
A L ++ +A F ++L+ +++ ++ +A + + G A ++
Sbjct: 633 AGALLAVGRVGEAVVMFRELLADRLRVFGADHSVTIVARKSLAGVCLVAGCVDEAVALYE 692
Query: 114 KVAND------DLAPLAVRYAATL----QAASILVDTSS-YEEISKILQKLSEPSNPMHQ 162
+V D P V +L ++A L D + Y+++ ++ P +P
Sbjct: 693 EVVADQLRVLGPDHPDTVASRGSLAGACRSAGRLADAITLYKDVVADQLRVLGPDHPDTL 752
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTR 201
+ L + + G + +A T+FE++ D N P+ +++R
Sbjct: 753 ASRGSLAGACWEAGHLDEAITLFEQVLADQLRVLGPNHPYTVASR 797
>gi|239817407|ref|YP_002946317.1| hypotheticalprotein [Variovorax paradoxus S110]
gi|239803984|gb|ACS21051.1| TPR repeat-containing protein [Variovorax paradoxus S110]
Length = 393
Score = 44.2 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-A 121
L + KLD+A + + L K +P I + G A F ++ D
Sbjct: 44 LMQAGKLDEAMTRADAFLKDKPK--DPQMRFLKGVIQLDTGKRAEAIAAFTQLTQDAPEL 101
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
P A + A+ D + L+ + +NP + A E LG
Sbjct: 102 PEPYNNLAVIYASQNQFDKA-----RSALES-AIRTNPSYATAQENLG 143
>gi|83312205|ref|YP_422469.1| methyltransferase [Magnetospirillum magneticum AMB-1]
gi|82947046|dbj|BAE51910.1| Predicted methyltransferase [Magnetospirillum magneticum AMB-1]
Length = 394
Score = 44.2 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 18/159 (11%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E ALEL + +D A +F++I + L + + L + A +F
Sbjct: 31 EAIQSALELVAQDDIDGALRAFDRIEASVPGDATVL-RLRAQTYLKVGQYAEAARILFGL 89
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK----LSEPSNPMHQFANEILGI 170
V D LV +Y +I + + ++ A LG+
Sbjct: 90 VRADPKVDPIF-DL-----VWALVHARAYVDIVGVCAEYKHVIAGDK---RFLA--ALGM 138
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
+ G+ Q A + P R + +A +
Sbjct: 139 AQTALGRYQDALATLSQ--AREVLPRDFYVRHNLSIALL 175
>gi|30249415|ref|NP_841485.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
gi|30138778|emb|CAD85355.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
Length = 929
Score = 44.2 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 47 EKKKNIVGENFAQALELF----NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ +I + F L N + A+ FE +L +D K ++ + A I +A+
Sbjct: 501 NQALSIQSDYFPAISNLARIDMQENHPEAAQQRFEDVLKRDKKNVQAMNAL--AGIALAR 558
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV-DTSSYEEISKILQKLSEPSNPMH 161
G+ + A K + ++ P ++ A L A + V D ++K LQ + +P +
Sbjct: 559 GNKEEATGWLEKASREN--PDELQPALQLGAHYLAVNDPGKSLALAKKLQGI----HPDN 612
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
E+L S L G A F++LA P +Q+ LA I +S Q NK
Sbjct: 613 LSIVELLARSYLATGDKDAALENFQKLA--ARLPDSAP--AQLQLAQIYSSMQNNK 664
>gi|319787001|ref|YP_004146476.1| hypothetical protein Psesu_1398 [Pseudoxanthomonas suwonensis 11-1]
gi|317465513|gb|ADV27245.1| Protein of unknown function DUF2133 [Pseudoxanthomonas suwonensis
11-1]
Length = 207
Score = 44.2 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 81/211 (38%), Gaps = 19/211 (9%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYL--FDGSHEKKKNIVGENFA 58
M ++ + ++ ++ K + ++ + L LA + + + + + +
Sbjct: 1 MAIDDLLDEHEQGERVRAWLRKNLPGIIAGLALGLAAIWGMRQWQERNLGAQQQAHAAYT 60
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
QAL + + D + L+ +Y L +++A V G T++A + +
Sbjct: 61 QALAKVEAGEEDPGAA-----LAGHEGVYATLGALHVAKAQVEAGKTEDAITTLRGIKAE 115
Query: 119 DLA-PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
P+ + A L AA+ D + ++ L + + E+ + + GK
Sbjct: 116 PELEPVVKQRLAQLLAATGKADEA--------VKLLEGDDSGLGL---ELRADALVAAGK 164
Query: 178 VQKAKTIFEELAKDNNSPFGISTRSQMILAN 208
++A+ ++ + ++ R ++ L +
Sbjct: 165 PEEARAQYQRALEVLDAEAPARRRIELKLQD 195
>gi|300704412|ref|YP_003746015.1| hypothetical protein RCFBP_20216 [Ralstonia solanacearum CFBP2957]
gi|299072076|emb|CBJ43408.1| conserved protein of unknown function [Ralstonia solanacearum
CFBP2957]
Length = 211
Score = 44.2 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 63/163 (38%), Gaps = 7/163 (4%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVG--ENFAQALELFNSNKLDDARSSFEKILSQDN 84
+ I+++L++A W + ++ E +A++ ++ K+ A + E
Sbjct: 28 VAIVVLLAVAAWLGWKNWQRKQAAEATVLYEQVQKAVDAKDAEKIKRAAADMED--KFGR 85
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y ++ + A L D A + L+ D + + A L+ A +L+D +Y+
Sbjct: 86 TAYAQMTALSAAKALYEASDAAGA-KAQLQWTIDHASDDEYKAVAKLRLAGLLLDEKAYD 144
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ ++ P+ ++A K A+ ++
Sbjct: 145 QGLALVSGDVAPAFAALYADRRGDLLAA--QNKRDDARAAYKL 185
>gi|87307368|ref|ZP_01089513.1| hypothetical protein DSM3645_17635 [Blastopirellula marina DSM
3645]
gi|87290108|gb|EAQ81997.1| hypothetical protein DSM3645_17635 [Blastopirellula marina DSM
3645]
Length = 1065
Score = 44.2 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 5/157 (3%)
Query: 56 NFAQALELFNSNKLDDARSSFE-KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ + A +F + N ++ L K +A + +
Sbjct: 817 AYKLGWAQYQQRDYAAASDAFAVQTSKYPNGPLAADASFMRGECLYKKDQFADALSAYGQ 876
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISA 172
V +D L+ +R L A ++E + + +L P +P+ A LG +
Sbjct: 877 VKSDRLSSNDMRDLWRLHAGQSAAQLKKWDESIRWMNELLTQSPDSPVAAEAQYELGWAN 936
Query: 173 LKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
K +A F LA + SP R++ +L +
Sbjct: 937 YNQKKTDEAIQRF--LAAADLSPGKTGARARFMLGEL 971
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 7/127 (5%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLS--NMYIASILVAKGDTKNAAEIFL 113
+A + L NK +A + K L+ ++ + M A ++ + D A ++
Sbjct: 190 AYAWGVTLEELNKPTEAADVYSKFLA-AFPDHDLAAEVRMRQAETVLNQNDFAKAEQMLT 248
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGIS 171
V D PL A + A + + I +++ P + H + + G
Sbjct: 249 TVTADPQFPLI--DHALYRLAFARLKQEKLADAGAIYAQIAADYPKSKYHDESMMLAGRC 306
Query: 172 ALKFGKV 178
+ G
Sbjct: 307 YYRAGDW 313
>gi|260771394|ref|ZP_05880319.1| membrane protein [Vibrio furnissii CIP 102972]
gi|260613520|gb|EEX38714.1| membrane protein [Vibrio furnissii CIP 102972]
gi|315180974|gb|ADT87888.1| hypothetical protein vfu_A02773 [Vibrio furnissii NCTC 11218]
Length = 204
Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 66/196 (33%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W + D + ++ +A++
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRFYQDSVTSGQ-EAASASYTKAIQT 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ +D I S Y L+ M +A V G A + A +
Sbjct: 64 LTTKGVDGEADVQSFIDSNSKSEYAVLAAMQLAKAQVQAGQLDEALAQL-EWAKNATGDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A++ T + A + + +++ L + E+ G +L+ G + A
Sbjct: 123 ALKPVITYRVARLQAEQGNFDAALSELA--TIKEQSWTGRVAELRGDISLRKGDKEAAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + +++ +
Sbjct: 181 AYAEAQQADDASQTLQ 196
>gi|194335759|ref|YP_002017553.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308236|gb|ACF42936.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 4489
Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 60/170 (35%), Gaps = 24/170 (14%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ F +AL L ++++A + + +IL + K ++ L + A++ K + A
Sbjct: 784 AASDHASRFPEALTLHQQGRINEAEALYREILCANPKHFDALQLL--ATVAAQKRNFSEA 841
Query: 109 AEIFLKVANDDLA--------PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
A +F + + ++ A D ++ NP
Sbjct: 842 AALFEQAFAINSDCPELLNNWGNTLKELKRYDEALHCFDRAT-------------ELNPY 888
Query: 161 HQFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILANI 209
+ A GI+ + + +A ++ +A + P R ++ +
Sbjct: 889 YVEAYYNRGITLKELQRYDEALLSYDAVIALKPDYPEVYVNRGNVLKELL 938
Score = 41.5 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+ + AL L LDDA + KIL +D + ++ L + A+I K +
Sbjct: 2272 QYRPAHSTRLHSALALHQQGCLDDAEVLYRKILREDPEHFDALQLL--ATIAAQKKNFSE 2329
Query: 108 AAEIFLKV 115
A E+F +
Sbjct: 2330 AVELFDQA 2337
Score = 38.4 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
AL L LDDA + +IL + + ++ L + A++ + + A E+F +
Sbjct: 3667 RLHSALALHQQGCLDDAEVLYREILRANPEHFDALRLL--ATVAAQRKNFPEAEELFDQA 3724
Query: 116 ANDDLA--------PLAVRYAATLQAASILVDTS 141
+ A +A++ A D +
Sbjct: 3725 LKINPAHATVWNNRGIALQELKRYDEALQCYDNA 3758
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Query: 35 LAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY 94
L + + AL +LD+A + + +IL + ++ +
Sbjct: 14 LGGFRVEHQTETSDPSDAPVARLQAALTFHQQGRLDEAEAVYREILVTEPDQFDAFRLL- 72
Query: 95 IASILVAKGDTKNAAEIFLKV 115
A I + A +F +
Sbjct: 73 -AIIAAQRKQFHEAIALFERA 92
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 6/74 (8%)
Query: 48 KKKNIVGENFAQ----ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ G + AL L LDDA + +++ + + + + A++ K
Sbjct: 2894 ETAARSGPAYFATLQSALALHQQGCLDDAEVLYREVVHSNPDYFEAVQLL--ATVAAQKQ 2951
Query: 104 DTKNAAEIFLKVAN 117
+ A E+F
Sbjct: 2952 NFHEALELFDHALA 2965
>gi|313205668|ref|YP_004044845.1| tetratricopeptide tpr_1 repeat-containing protein [Riemerella
anatipestifer DSM 15868]
gi|312444984|gb|ADQ81339.1| Tetratricopeptide TPR_1 repeat-containing protein [Riemerella
anatipestifer DSM 15868]
gi|315022600|gb|EFT35626.1| TPR-domain containing protein [Riemerella anatipestifer RA-YM]
gi|325336890|gb|ADZ13164.1| Tetratricopeptide TPR-1 [Riemerella anatipestifer RA-GD]
Length = 986
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 68/164 (41%), Gaps = 5/164 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+ A +L+ + + A +EK + + + + GD A + F V
Sbjct: 722 LSTARQLYAKKQYEKAIPYYEKYLAQNVSSNTAFQAQYELGESYYQSGDDAKALKSFNFV 781
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP-MHQFANEILGISALK 174
P + A +++A IL+ + EE ++ L KL + +NP + FA + L
Sbjct: 782 ---TAYPNDYQEEARIRSAQILLSKNKGEEAAEHLAKLVDSNNPKIKSFAQQELMKYYAD 838
Query: 175 FGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
KA+T + + + + ++++I A + + ++K+
Sbjct: 839 KKDFAKAETYAGLILSNTKNSPAVLEQAKVIKARSLMNQGKDKE 882
>gi|260913152|ref|ZP_05919634.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260632739|gb|EEX50908.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 204
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 16/199 (8%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----N 56
+E + N K +K + +IL ++ W Y K +
Sbjct: 5 IEEEQELNQLKA---WWSENHKTVIASVILAFAAILGWNYWKSYQITKTQQTSAAYEYLI 61
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ +L NK + + + +Y+ L+ + A + V + A + +
Sbjct: 62 YRNTTDLTERNKDIE-----QFVQESGKNVYSTLALLNKAKVEVEQQFYALAEKTLKQAV 116
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
D + A+L+ AS+ Y L K+ ++G +L G
Sbjct: 117 TDAPDD-ILASIASLRLASVQYQQHDYNGALDSLNKVKSDV--WDSKKYLLMGDISLAKG 173
Query: 177 KVQKAKTIFEELAKDNNSP 195
+ AKT +E+ A++ SP
Sbjct: 174 DIVSAKTNYEK-AQEKASP 191
>gi|242279006|ref|YP_002991135.1| hypothetical protein Desal_1534 [Desulfovibrio salexigens DSM 2638]
gi|242121900|gb|ACS79596.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
Length = 216
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 9/168 (5%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
+IL+ ++ + Y+ K ++ +G + ++ K + S+FEK
Sbjct: 40 VAAIILIAGGVSGFKYMNQQKLIKAQSEMGTILIK----YSGAKQAEELSAFEK---DVP 92
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
P + +A + G +A ++ +A V + +
Sbjct: 93 ASMKPAVQLALAKAWMDAGSYADAKAVWAAIAKTSPEMAPVAALGQAKCLMLENKAGEAV 152
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+ + +++ + N +LG +A K G Q A ++ L +
Sbjct: 153 TVLQKMKESA--GASYASSINRLLGEAAEKAGNAQVAIQAYQALLTSS 198
>gi|152987483|ref|YP_001346427.1| thioredoxin [Pseudomonas aeruginosa PA7]
gi|150962641|gb|ABR84666.1| thioredoxin [Pseudomonas aeruginosa PA7]
Length = 289
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 2/121 (1%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A LF ++ DA ++ + +L++ N P + + A L +G+ + A I
Sbjct: 121 DPLEVAQALFAEGRIGDAEATLKALLAEHNDN--PAALILYARCLAERGELEEAQAILDA 178
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
V +D+ A L D E+ L + +Q A + L +
Sbjct: 179 VKSDEHKQALAGARAQLTFLRQAADLPDAAELKSRLANDAGDDEAAYQLAIQQLARQQYE 238
Query: 175 F 175
Sbjct: 239 A 239
>gi|114332038|ref|YP_748260.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
gi|114309052|gb|ABI60295.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
Length = 930
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA-- 121
+ A+ FE++L QD K ++ + A I +++G+ + A E K + ++
Sbjct: 522 LQEKHPEAAQQRFEEVLKQDKKNVQAMNAL--AGIALSQGNKEKATEWLEKASQENPDEL 579
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A++ A A + + ++K LQ + +P + A E+L + L G A
Sbjct: 580 PPALQLGAHYLAIN---EPGKSLALAKKLQGI----HPDNLSAIELLARAYLATGDKDAA 632
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
F++LA P +Q+ LA I AS Q +
Sbjct: 633 LENFQKLA--ARLPDSAP--AQLQLAQIYASMQNTR 664
>gi|242280662|ref|YP_002992791.1| hypothetical protein Desal_3201 [Desulfovibrio salexigens DSM 2638]
gi|242123556|gb|ACS81252.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
DSM 2638]
Length = 571
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 57/187 (30%), Gaps = 33/187 (17%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKL--------------- 69
A +L++L + K + +AL + +N
Sbjct: 388 AGTAVLVVLLAGAYTQAGHWKDSKAL------YTRALAVTENNHHMHYNYGNLLEREKNY 441
Query: 70 DDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
+A F+ D Y ++++ ASIL KGD A +++ + + A
Sbjct: 442 TEAAKHFKAAFKADPSHYKAMTSL--ASILSRKGDPYTALDLYQRALQINPDYAP----A 495
Query: 130 TLQAASILVDTSSYEEISK--ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF-E 186
+ + +E + EP P H +G+ G AK
Sbjct: 496 LGNRGIVYMQQGKFESAIADIRKAQQLEPQQPNHMI---NMGLLYYMRGDNSAAKEWLRR 552
Query: 187 ELAKDNN 193
L D N
Sbjct: 553 ALQVDPN 559
>gi|15837065|ref|NP_297753.1| hypothetical protein XF0463 [Xylella fastidiosa 9a5c]
gi|9105309|gb|AAF83273.1|AE003896_10 hypothetical protein XF_0463 [Xylella fastidiosa 9a5c]
Length = 218
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 16/204 (7%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+ G+ W+ + ++ + + F ++ V + + A + KL A+
Sbjct: 17 EHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFAVFGKLLQAKE 76
Query: 75 ------SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ K+ LY L + +A G+T A +I + +
Sbjct: 77 LGNAAQALAKLNGAPAGLYAELGALQLAKAQSEAGNTAEAIKILRTL----PVDSQFKLI 132
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A + A +LV T +E +K+L ++ + EI G + L GK ++A+ + +
Sbjct: 133 ADQRLARLLVATGKADEANKLLATRNDDVS------FEIQGDALLVLGKREQARERYAKA 186
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+S ++ L ++ +
Sbjct: 187 LAMGDSAAPQRRILEIKLMDVGGT 210
>gi|28199498|ref|NP_779812.1| hypothetical protein PD1621 [Xylella fastidiosa Temecula1]
gi|182682231|ref|YP_001830391.1| hypothetical protein XfasM23_1713 [Xylella fastidiosa M23]
gi|28057613|gb|AAO29461.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182632341|gb|ACB93117.1| conserved hypothetical protein [Xylella fastidiosa M23]
gi|307578505|gb|ADN62474.1| hypothetical protein XFLM_02375 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 212
Score = 43.8 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 77/204 (37%), Gaps = 16/204 (7%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+ G+ W+ + ++ + + F ++ V + + A + KL A+
Sbjct: 11 EHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFAVFGKLLQAKE 70
Query: 75 ------SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ K+ + LY L + +A G+T A +I + +
Sbjct: 71 LGNAAQALAKLNGAPSGLYAELGALQLAKAQSEAGNTAEAIKILRTL----PVDSQFKLI 126
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A + A +LV T +E +K+L ++ + EI G + L GK ++A+ + +
Sbjct: 127 ADQRLARLLVATGKADEANKLLATRNDDVS------FEIQGDALLVLGKREQARERYAKA 180
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+S ++ L ++ +
Sbjct: 181 LAMGDSAAPQRRILEIKLMDVGGT 204
>gi|323499820|ref|ZP_08104779.1| hypothetical protein VISI1226_15271 [Vibrio sinaloensis DSM 21326]
gi|323315061|gb|EGA68113.1| hypothetical protein VISI1226_15271 [Vibrio sinaloensis DSM 21326]
Length = 204
Score = 43.8 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 65/196 (33%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+++ + K K + ++ + L W Y D S + E++ +A++
Sbjct: 5 DSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQD-SVTAAQEAASESYTKAVQA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ + + I + Y L+ + +A + V G+ A + A
Sbjct: 64 LAAKGAEGEAAVQSFIDANKETQYAVLAALQLAKVQVEAGNLDEALAQL-EWAKTATKDE 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
AV + A + + ++ L + E+ G L+ G Q A
Sbjct: 123 AVSAVINYRLARLKAEQGDFDAAIAELS--AIGDESWAGRVAELRGDILLRKGDSQAAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYTEAQQAGDASQTLQ 196
>gi|262402854|ref|ZP_06079415.1| membrane protein [Vibrio sp. RC586]
gi|262351636|gb|EEZ00769.1| membrane protein [Vibrio sp. RC586]
Length = 204
Score = 43.8 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 6/197 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D S + N++QA++
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQD-SVVAAQEAASHNYSQAMDA 63
Query: 64 FNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ K +A +S + I + Y L+ M +A + V G A P
Sbjct: 64 LVA-KGAEAEASIQTFIDANKETEYAVLAAMQLAKVQVDAGQLDEALAQLEWANGVTKDP 122
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
A++ T + A + + +EE L + E E+ G ++ G A
Sbjct: 123 -ALKPLLTYRVARLQAEQGQFEEALAQLGNIQE--KSWLGRVAELRGDILMRKGDSTGAY 179
Query: 183 TIFEELAKDNNSPFGIS 199
+ E + +++ +
Sbjct: 180 AAYTEAQQADDASQTLQ 196
>gi|168701390|ref|ZP_02733667.1| TPR domain protein [Gemmata obscuriglobus UQM 2246]
Length = 675
Score = 43.8 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-L 113
+ F +A+ S LD+A + ++L+ L+N+ A+I+ +GD A ++
Sbjct: 6 DLFQRAVAAHRSGSLDEAEHGYRQLLTATPNHPPALTNL--AAIVAQRGDADEAERLYLE 63
Query: 114 KVANDDLAPLAVRYAATL-QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
+ D A L + D + E + L + LG++A
Sbjct: 64 SLGADPDQLNTHFNLANLYRRTGRSADAIPHYEDALRLSPDA-------PAVLVNLGLAA 116
Query: 173 LKFGKVQKAKTIFE-ELAKDNNSPFGIS 199
G ++ F + + + P G++
Sbjct: 117 GDVGNWPRSVECFARAVTVNPDVPEGLT 144
>gi|67480111|ref|XP_655416.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|56472551|gb|EAL50030.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
Length = 890
Score = 43.8 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSN-MYIASILVAKGDTKNAAEIFL-KVANDDLA 121
N+ KL +A + F+++L N L+ + S GD + A F V D
Sbjct: 234 VNTGKLKEAIAHFDQLLKNHP---NVLAGYLGRGSAKAMLGDLQKALTDFNLAVKKDSKC 290
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM--HQFANEILGISALKFGKVQ 179
A + ++ A ++ E+ +K ++ E + A LGI ++
Sbjct: 291 GDAYKRRGQVKLALGQTQSA-LEDFNKAIELTPEEGDCYRQRGSAYHALGIFDKAAEDIK 349
Query: 180 KAKTIF 185
K+ +
Sbjct: 350 KSIKLI 355
>gi|317153062|ref|YP_004121110.1| hypothetical protein Daes_1350 [Desulfovibrio aespoeensis Aspo-2]
gi|316943313|gb|ADU62364.1| protein of unknown function DUF181 [Desulfovibrio aespoeensis
Aspo-2]
Length = 575
Score = 43.8 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L + D+A +++ Y + A + + GD + A + F V L P
Sbjct: 400 LAEESDFDEALEGLDEVEDIYPDAY--FIPFFRALLALRMGDPEYAVDQF--VLAGPLQP 455
Query: 123 L-AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R A L ++E+ L + + ++ N + G++ K G+ + A
Sbjct: 456 ANEERALCAFYEAYALSQQERWDEVVAPLDRALALDDECREYFN-LRGVAHFKGGRYKDA 514
Query: 182 KTIFEE-LAKDNNSPFGIST 200
FE L D+ SP ++
Sbjct: 515 ARDFEASLTIDSGSPHDLAN 534
>gi|152980881|ref|YP_001353815.1| hypothetical protein mma_2125 [Janthinobacterium sp. Marseille]
gi|151280958|gb|ABR89368.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 216
Score = 43.4 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 68/193 (35%), Gaps = 4/193 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y + L++++L + + + G+ + + + + + + + +
Sbjct: 21 YGNLVTWLLIVVLGAYAAWAGWGYYQRSQATQAGQLYEELQKAVAAQDKEKVQRAATDME 80
Query: 81 SQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
++ Y +S + A D K A V D + A ++ A IL+D
Sbjct: 81 AKFAGTAYAQMSALAAAKSAFDSNDFKTAKAQLQWVI-DKGQSDEYKAVAKVRLAGILLD 139
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+Y+E K+L + + A K+++A+ ++ + ++
Sbjct: 140 EKAYDEGLKVLAGEFPAQFANVVSDRKGDILVA--QNKLEEARAAYQTALEKTDAKNPAR 197
Query: 200 TRSQMILANIIAS 212
Q+ L I +
Sbjct: 198 QLIQIKLDAIGGA 210
>gi|325981899|ref|YP_004294301.1| hypothetical protein NAL212_1229 [Nitrosomonas sp. AL212]
gi|325531418|gb|ADZ26139.1| Protein of unknown function DUF2133 [Nitrosomonas sp. AL212]
Length = 212
Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 7/212 (3%)
Query: 1 MESNNDANSYKGKCKMGKC-CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQ 59
M + N + K G Y +++ +L+ A ++ +K+ G+ +
Sbjct: 1 MVTYNHEDQEKVDGFKGWWDKYGTAIVIIMTGMLATAGAIKAWEYYQQKQAQQAGDLYVL 60
Query: 60 ALELFNSNKLDDARSSFEKILSQDN--KLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
L+ + + + ++L Q Y P + + A G+ K A + +
Sbjct: 61 -LKQVQAGNDSEKINDTAQLLMQGYSSSGYAPRAALIAAQADAHAGNNKRAIQNLQWIL- 118
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
D +R A L+ + IL+D Y+E + L S + G + +
Sbjct: 119 DHAKETEMRDLARLRISGILLDEGKYDEALRFLDD--GYSEAFSGLYLDRKGDIQVATQR 176
Query: 178 VQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
+ +A+ ++E + QM L +
Sbjct: 177 ISEARLSYQEAINALDKSNNYYNIVQMKLDGL 208
>gi|320102982|ref|YP_004178573.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
ATCC 43644]
gi|319750264|gb|ADV62024.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
pallida ATCC 43644]
Length = 1053
Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 55/148 (37%), Gaps = 4/148 (2%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK-GDTKNAAEIFLKVANDDLA 121
L N+L+ AR+ + + + ++ M + + +A +L +
Sbjct: 323 LAQRNQLEPARTVWNQAAQRFPNSSRWVALMARVADAARRLNQLADAEAAYLSIVQTRPD 382
Query: 122 PLAVRYAATLQAASILVDTSSY--EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A L+AA + + ++ P++ A + +AL G+ +
Sbjct: 383 DPFAPD-AQLRAAELAFQRGDHLEARRRAAALAVTFPTSSWIPAARLVEARAALASGQAE 441
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMILA 207
+A TI L ++ + ++ ++ LA
Sbjct: 442 EAVTILTTLIENAQTDPALARAARYQLA 469
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ + A +A G + A I + + A+ AA Q A + + E I
Sbjct: 426 ARLVEARAALASGQAEEAVTILTTLIENAQTDPALARAARYQLARAALAHNDPETAFAIW 485
Query: 151 QKL-SEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
++L S +P + LG++ + G+ +A E
Sbjct: 486 RELGSTEGHPYVAASRYELGVNLYRLGRYDEAADALE 522
>gi|188996284|ref|YP_001930535.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931351|gb|ACD65981.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 557
Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 11/139 (7%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
S D A ++ IL D L+ ++ I V K D NAAE K+ +
Sbjct: 210 QSGNYDKAIEIYKNILKDDPNNLEALNRLFQ--IYVDKDDFNNAAETIDKIIRLNPKDND 267
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEILGISALKFGKVQKAK 182
A L+ + + EI + L+K S P NP +F +LG++ Q AK
Sbjct: 268 ----AILKKFLLYIKYGKSNEILQDLKKSSQENPDNPFLKF---MLGMAYETLEDYQNAK 320
Query: 183 TIFEELAKDNNSPFGISTR 201
I+EEL K + R
Sbjct: 321 AIYEELYKQQPDNQELIDR 339
>gi|186682273|ref|YP_001865469.1| hypothetical protein Npun_R1869 [Nostoc punctiforme PCC 73102]
gi|186464725|gb|ACC80526.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 157
Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
IA + +++ LS+ +F K I + F + + L + A ++F K++S +
Sbjct: 11 IAAIAVILSLSILGYFAW-------KTLITSDLFQKGINLAQAKDYQGAEAAFRKVISLN 63
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+ + +++ +L +G + A E+F +V A L+ A+IL+
Sbjct: 64 STN--DVVRLFLGDVLNQQGQVEEATELFREVIRRSPKNPD----AYLRLANILM 112
>gi|209551564|ref|YP_002283481.1| hypothetical protein Rleg2_3993 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537320|gb|ACI57255.1| Tetratricopeptide domain protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 550
Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ QAL+++ + A F ++L + + +A++L +G A + +A
Sbjct: 366 YEQALDMYRNGARRRAEIVFNQVLQSAPG--HTGAGFGLANLLFDRGKLTEALAAYKALA 423
Query: 117 NDDLAPLAVR-YAATLQAASILVDTS 141
P +R Q A D +
Sbjct: 424 EQAPDPTPIRMRLGDTQLALHQYDQA 449
>gi|329123604|ref|ZP_08252164.1| hypothetical protein HMPREF9095_1382 [Haemophilus aegyptius ATCC
11116]
gi|327469803|gb|EGF15268.1| hypothetical protein HMPREF9095_1382 [Haemophilus aegyptius ATCC
11116]
Length = 204
Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 59/194 (30%), Gaps = 11/194 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + N K K K I IL + + W Y E+ +
Sbjct: 5 IEEEQEINQLK---DWWKENGKTIIVAFILGVGGMFGWRYWQAHQVEQISQ-ASVQYDAL 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ N+ + + + + Y + + + K D AA + LK A
Sbjct: 61 INSVQQNEQAKKANIEQFVQANSKTAYAVFALLDESKKATEKQDFA-AAGVNLKQALMQS 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFGKV 178
+ L+ +++ + L ++ S A + + G + G
Sbjct: 120 QDEVLTSIVALRLSAVQFQLGQLDNALTTLNQVKGES----FNARKAILTGDIQVAKGDK 175
Query: 179 QKAKTIFEELAKDN 192
AK FE+ +
Sbjct: 176 VAAKNSFEQAQQSG 189
>gi|319795775|ref|YP_004157415.1| hypothetical protein Varpa_5146 [Variovorax paradoxus EPS]
gi|315598238|gb|ADU39304.1| Tetratricopeptide TPR_1 repeat-containing protein [Variovorax
paradoxus EPS]
Length = 383
Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-A 121
L + KLD+A + + L + +P I + G A F ++ D
Sbjct: 45 LMQAGKLDEAMAKADAFLKDKPR--DPQMRFLKGVIQLDTGKRAEAIAAFTQLTQDAPEL 102
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
P A + A+ D + L+ + +NP + A E LG
Sbjct: 103 PEPFNNLAVIYASQNQFDKA-----RSALES-AIRTNPSYATAQENLG 144
>gi|298492032|ref|YP_003722209.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
gi|298233950|gb|ADI65086.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 154
Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 23 WIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
+ ++ + +++++I F ++ G K F + ++L + + A ++F +++S
Sbjct: 6 PVGNIVAISLVTVSIGFLIYFGW---KTLTTSNLFQKGIKLCQAKDYNGAEAAFRQVISI 62
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
++ + + + IL +G T+ A E+F +V + A L+ A+IL+
Sbjct: 63 NSTN--DIVRLLLGDILKHQGKTEEAKELFSEVISRSPKNPD----AYLRLANILL 112
>gi|218663215|ref|ZP_03519145.1| thioredoxin [Rhizobium etli IE4771]
Length = 324
Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 58/160 (36%), Gaps = 10/160 (6%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ V +A EL + K+++A + ++ D + L+ M I + +
Sbjct: 148 EAAEVEAVLVEAAELLAAGKINEAAQLYAAVMQADPENAKALAGMAECMIAANQHERARE 207
Query: 109 --AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
++ +++ D ++ ++ A L D + E + L+ P + A
Sbjct: 208 TLTDLPEELSKDAGIQAVLKKLDQIEEARKLGDPVALE------RDLTAD--PDNHEARL 259
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
L G+ +A ++ + + S R Q++
Sbjct: 260 KLAKILNVEGRRDEAAEHLLQIMRKDRSFDDDGARRQLLQ 299
>gi|311747917|ref|ZP_07721702.1| hypothetical protein ALPR1_16369 [Algoriphagus sp. PR1]
gi|126575911|gb|EAZ80221.1| hypothetical protein ALPR1_16369 [Algoriphagus sp. PR1]
Length = 792
Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 9/137 (6%)
Query: 69 LDDARSSFE---KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
++A ++ +IL +D + L+ A L+ GDT A V N+ L L
Sbjct: 458 YEEAVKQYDRMYQILGKDAPVSQYLAPFAEA--LLGVGDTARA----KVVLNESLKKLPN 511
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
Y + + A+I + YE+ + + P A + LG++ ++ A F
Sbjct: 512 NYFSKFKLAAISYEEGEYEKAKSLYLESLNAEKPDLHPAYKNLGLTYMRLNDNANAIKYF 571
Query: 186 EELAKDNNSPFGISTRS 202
E + P +
Sbjct: 572 ELALAEKEEPELRRNLA 588
>gi|126208642|ref|YP_001053867.1| hypothetical protein APL_1174 [Actinobacillus pleuropneumoniae L20]
gi|190150502|ref|YP_001969027.1| hypothetical protein APP7_1233 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303250076|ref|ZP_07336278.1| hypothetical protein APP6_1488 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307246090|ref|ZP_07528172.1| hypothetical protein appser1_12930 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307252815|ref|ZP_07534705.1| hypothetical protein appser6_13280 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255071|ref|ZP_07536889.1| hypothetical protein appser9_13050 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259508|ref|ZP_07541233.1| hypothetical protein appser11_13050 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261657|ref|ZP_07543324.1| hypothetical protein appser12_12170 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307263845|ref|ZP_07545450.1| hypothetical protein appser13_12550 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126097434|gb|ABN74262.1| hypothetical protein APL_1174 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915633|gb|ACE61885.1| hypothetical protein APP7_1233 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302651139|gb|EFL81293.1| hypothetical protein APP6_1488 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853025|gb|EFM85248.1| hypothetical protein appser1_12930 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306859714|gb|EFM91737.1| hypothetical protein appser6_13280 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861944|gb|EFM93920.1| hypothetical protein appser9_13050 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866444|gb|EFM98307.1| hypothetical protein appser11_13050 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868649|gb|EFN00459.1| hypothetical protein appser12_12170 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870834|gb|EFN02573.1| hypothetical protein appser13_12550 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 207
Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 6/152 (3%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE--L 63
+ ++ K I +I+ + W + + + + +E L
Sbjct: 10 EEQQFEEAKNWFKENGTPILVAVIIACAATLGWNFWQNH-QVQAAQQTSATYQNVMESYL 68
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K F I + Y S + A V K D AA+ L+ A +
Sbjct: 69 QDPEKNQPLIEKF--ISENKDSSYAVFSQLESAKQAVEKADFA-AAKTVLQSALTSTSDA 125
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSE 155
+++ + A++ +Y++ L ++++
Sbjct: 126 SLQTIIRFRLATLDYQLKNYDDALATLGQITD 157
>gi|119357637|ref|YP_912281.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3035
Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
N +AL+L +LD+A + ++ILS + ++ L A+I + D++ A
Sbjct: 2268 NEESVKLQRALKLHQEGRLDEAEAICQEILSSIPEHFDAL--QLSATIAAQRHDSEKALA 2325
Query: 111 IFLKVAN 117
+F +
Sbjct: 2326 LFDQALA 2332
Score = 42.7 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
N +AL L +LD+A + + +ILS + ++ L A+I + D++ A
Sbjct: 808 NEESVKLQRALTLHQEGRLDEAEALYREILSSSPEHFDAL--QLSATIAAQRHDSEQALV 865
Query: 111 IFLKVANDDLAPLAVRY 127
+F + + + R
Sbjct: 866 LFDQAISINPGHPGSRN 882
Score = 41.5 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 48/126 (38%), Gaps = 11/126 (8%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+AL+L +LD+A + + +ILS + ++ L A+I + D++NA +F +
Sbjct: 1628 KLQRALKLHQEGRLDEAEALYREILSFSPEHFDAL--QLSATIAAQRHDSENALVLFDQA 1685
Query: 116 ANDDLA--------PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
+A++ + A + + ++ S N + +
Sbjct: 1686 LAIKPDHARSLNNRGIALQELKRYEEALASYERA-IAVKPDFIEPYSNRGNTLQELKRYE 1744
Query: 168 LGISAL 173
++
Sbjct: 1745 EALACY 1750
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
AL + LD+A + ++ IL Q+ + ++ L + A+I + +++ A +F +
Sbjct: 32 TLHSALAFHQNGALDEAEALYQAILLQNPEHFDALQLL--ATIAAQRNESEKAVALFDQA 89
Query: 116 ANDDLA 121
N +
Sbjct: 90 LNINPD 95
>gi|326559232|gb|EGE09663.1| hypothetical protein E9M_09369 [Moraxella catarrhalis 46P47B1]
Length = 277
Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 60/201 (29%), Gaps = 22/201 (10%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA---- 60
ND N K + +L++L++ + + ++ K + + +
Sbjct: 7 NDNNFTDQKSFNALKLHGEKIIYAVLLVLAVFFGWQYYQKNYAKIDTVAADAYTSISVRD 66
Query: 61 -----------LELFNSNKLDDARSSF-----EKILSQDNKLYNPLSNMYIASILVAKGD 104
L+ L + + + N +Y + M A D
Sbjct: 67 ERLVQAYLNPQLDEVAKQALAEEEKQLFGDIDALVAAHGNTVYAWQALMIKARHQTNNND 126
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFA 164
A + + +L + A ++ A ++ I + + P+
Sbjct: 127 LDGAVATLSQATSINLDDDGLTAIAKIRHARAMLANGDTNGALSIANE-AMPT-AFEASR 184
Query: 165 NEILGISALKFGKVQKAKTIF 185
E+LG ++ AK+ +
Sbjct: 185 QELLGDIYHAKNEIDNAKSAY 205
>gi|15604102|ref|NP_220617.1| hypothetical protein RP231 [Rickettsia prowazekii str. Madrid E]
gi|14424111|sp|Q9ZDU3|Y231_RICPR RecName: Full=Uncharacterized protein RP231
gi|3860794|emb|CAA14694.1| unknown [Rickettsia prowazekii]
gi|292571828|gb|ADE29743.1| hypothetical protein rpr22_CDS226 [Rickettsia prowazekii Rp22]
Length = 220
Score = 43.4 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 63/168 (37%), Gaps = 6/168 (3%)
Query: 48 KKKNIVGENFAQALEL-FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
K G+ + + L + A ++ E +++ N ++ + +I +++
Sbjct: 51 KNNQKNGDILVKTIGLDTTKDNKALAFNTLENLITSSNTKIKEIAALEQVAIRMSEKKYL 110
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-----EISKILQKLSEPSNPMH 161
A + K+ +++ A + I++D S ++ K L + P
Sbjct: 111 GAKNLLNKIIDNEKYSEISTAYARIAWCCIVLDDQSLNIQDKGKLQKYLNYFDDEKKPFW 170
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
A I I +K +A+ + L NN + +++ +L ++
Sbjct: 171 ATATIIKAILDIKHNMKTQAEKNLKNLLASNNVSDLLKDQAKALLVSL 218
>gi|121998566|ref|YP_001003353.1| hypothetical protein Hhal_1787 [Halorhodospira halophila SL1]
gi|121589971|gb|ABM62551.1| conserved hypothetical protein [Halorhodospira halophila SL1]
Length = 208
Score = 43.4 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 78/209 (37%), Gaps = 8/209 (3%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILS---LAIWFYLFDGSHEKKKNIVGENFAQALELF 64
S + + K ++ ++L + + ++ + E+ +A+ L+
Sbjct: 3 RSDDEQLQQLKDWWQRNGGSILLGLTGALLILAGWWGYGTWQERGAQQAAAAYAEFLQAT 62
Query: 65 NSNKLDDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
S + + A + +++L + Y ++ + +A I G+ + AAE + D+
Sbjct: 63 QSGEPEAAEQAGQRVLDDHARSGYAGMTALRMARIQAEAGEYRRAAETLGWLI-DNADHS 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A+ A L+ A +L + EE +L+ +E+ G + G+ +A
Sbjct: 122 AMVELARLRQARVLGEE-DPEEALAVLEGSVSAG--FTASFDELRGDLLRELGRYDEAAE 178
Query: 184 IFEELAKDNNSPFGISTRSQMILANIIAS 212
+++ ++ L + +
Sbjct: 179 AYQQALDQEGLGAQSRELVRLKLQAVESE 207
>gi|73997220|ref|XP_543747.2| PREDICTED: similar to ARG99 protein isoform 2 [Canis familiaris]
Length = 865
Score = 43.4 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 13/128 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDN---KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
L + K ++A + + + Y+ L AS+L + K A EI+ +
Sbjct: 541 LKSQEKKEEAITLLKDSIQYGPEFADAYSSL-----ASLLAEQERFKEAEEIYQAGIKNC 595
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+ LVDT S E+ Q+ + +P H A LG G
Sbjct: 596 PDSSDLHN----NYGVFLVDTGSPEKAVAHYQQ-AIALSPSHHVAMVNLGRLYRSLGDNS 650
Query: 180 KAKTIFEE 187
A+ ++
Sbjct: 651 AAEEWYKR 658
>gi|162448878|ref|YP_001611245.1| hypothetical protein sce0608 [Sorangium cellulosum 'So ce 56']
gi|161159460|emb|CAN90765.1| hypothetical protein sce0608 [Sorangium cellulosum 'So ce 56']
Length = 1633
Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 3/150 (2%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
+A L KLDDA ++ E + + L+ A I A+GD AA + +++
Sbjct: 1106 ERARVLRKKGKLDDALAALENVTLLEPDHIGALA--LSADISKAQGDLGQAAAFYAELSR 1163
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
AP R + + A ++ ++L L E L A + G
Sbjct: 1164 VAKAPGEQRLMSGITAVDAYEKLGEHDRALEVLIGLHRAGLSTLVV-RERLVRVAARVGS 1222
Query: 178 VQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+A + EEL + ++P G +++ +A
Sbjct: 1223 WDEATRLLEELMVERDTPEGRIEAARLAMA 1252
>gi|30262208|ref|NP_844585.1| TPR domain-containing protein [Bacillus anthracis str. Ames]
gi|47527485|ref|YP_018834.1| TPR domain-containing protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185049|ref|YP_028301.1| TPR domain-containing protein [Bacillus anthracis str. Sterne]
gi|227814992|ref|YP_002815001.1| TPR domain protein [Bacillus anthracis str. CDC 684]
gi|254737222|ref|ZP_05194926.1| TPR domain protein [Bacillus anthracis str. Western North America
USA6153]
gi|254751538|ref|ZP_05203575.1| TPR domain protein [Bacillus anthracis str. Vollum]
gi|254759052|ref|ZP_05211079.1| TPR domain protein [Bacillus anthracis str. Australia 94]
gi|30256839|gb|AAP26071.1| tetratricopeptide repeat protein [Bacillus anthracis str. Ames]
gi|47502633|gb|AAT31309.1| TPR domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49178976|gb|AAT54352.1| TPR domain protein [Bacillus anthracis str. Sterne]
gi|227007564|gb|ACP17307.1| tetratricopeptide repeat protein [Bacillus anthracis str. CDC 684]
Length = 426
Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 19 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 78
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 79 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 132
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 133 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 191
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 192 EFEKAEDVIVKMSTKTN 208
>gi|261212139|ref|ZP_05926425.1| membrane protein [Vibrio sp. RC341]
gi|260838747|gb|EEX65398.1| membrane protein [Vibrio sp. RC341]
Length = 204
Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 67/196 (34%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D + N++QA++
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDTVVAAQ-EAASHNYSQAMDA 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ D S I + Y L+ M +A V G A + A
Sbjct: 64 LVAKGADAESSIQTFIDANKETEYAVLAAMQLAKAQVDAGQLDEALAQL-EWAKGATQDP 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A++ T + A + + S +++ L + E S E+ G ++ G A
Sbjct: 123 ALKPLLTFRVARLQAEQSQFDDALTQLSNIQEKSWAGRVA--ELRGDILMRKGDSAGAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + +++ +
Sbjct: 181 AYTEAQQADDASQTLQ 196
>gi|170730867|ref|YP_001776300.1| hypothetical protein Xfasm12_1777 [Xylella fastidiosa M12]
gi|167965660|gb|ACA12670.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 212
Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 16/204 (7%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+ G+ W+ + ++ + + F ++ V + + A + KL A+
Sbjct: 11 EHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFAVFGKLLQAKE 70
Query: 75 ------SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ K+ LY L + +A G+T A +I + +
Sbjct: 71 LGNAAQALAKLNGASAGLYAELGALQLAKAQSEAGNTAEAIKILRTL----PVDSQFKLI 126
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A + A +LV T +E +K+L ++ + EI G + L GK ++A+ + +
Sbjct: 127 ADQRLARLLVATGKADEANKLLATRNDDVS------FEIQGDALLLLGKREQARERYAKA 180
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+S ++ L ++ +
Sbjct: 181 LAMGDSAAPQRRILEIKLMDVGGA 204
>gi|323698154|ref|ZP_08110066.1| hypothetical protein DND132_0736 [Desulfovibrio sp. ND132]
gi|323458086|gb|EGB13951.1| hypothetical protein DND132_0736 [Desulfovibrio desulfuricans
ND132]
Length = 886
Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 81/218 (37%), Gaps = 22/218 (10%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLI--LMILSLAIWFYLFDGSHEKKKNIVGENFA 58
MES ND S + + ++ P+ + L ++ + DG + G+
Sbjct: 410 MESRNDLESL-----LARAVFEIDVPVQLRTLKLVWRSRGKEWADGFKQLAPQE-GDYIW 463
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
A+E LD A ++ ++ + Y P + KGD A + +
Sbjct: 464 DAMESLEKGDLDAAEGLLKEAQAKYPRSYQP--QSLWGYWYLEKGDVNQAMFHWQEAERM 521
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM-HQFANEILGISALKFGK 177
PL A LQA + V+ Y++ ++++ S + + + +K G
Sbjct: 522 SYTPLQQGCMAFLQARLMEVE-GDYKDAINTYKRVNSLSPTWLQPVYRQAVCM--VKMGF 578
Query: 178 VQKAKT-IFEELAKDNNS-------PFGISTRSQMILA 207
+A +F+ +A+D N P R Q++ A
Sbjct: 579 TGQAMDTLFDLVARDPNIFNRILVDPELDRGRVQLLSA 616
>gi|282165272|ref|YP_003357657.1| hypothetical protein MCP_2602 [Methanocella paludicola SANAE]
gi|282157586|dbj|BAI62674.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 403
Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 53/139 (38%), Gaps = 9/139 (6%)
Query: 72 ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATL 131
A + E +D Y M I + +G+ ++A F + +R A+
Sbjct: 161 AEEALESAPDEDQAAY---VRMLKGCIALRQGNPESAITFFDE----RKPAGRLRTLASF 213
Query: 132 QAASILVDTSSYEEISKILQKLS-EPSNPM-HQFANEILGISALKFGKVQKAKTIFEELA 189
+ + + YE + + +P+ +G A+ G ++KA++ +E++
Sbjct: 214 YSGIVRYEKEDYEGAIRHFESARPGAGDPLDRMAIGCNVGACAVNIGDMEKAESELQEVS 273
Query: 190 KDNNSPFGISTRSQMILAN 208
+ G + +LA+
Sbjct: 274 RSAWKKSGAKEAYRKLLAD 292
>gi|87306703|ref|ZP_01088850.1| Cellulose synthase (UDP-forming) [Blastopirellula marina DSM 3645]
gi|87290882|gb|EAQ82769.1| Cellulose synthase (UDP-forming) [Blastopirellula marina DSM 3645]
Length = 1121
Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 17/146 (11%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLY-------NPLSNMYIASILVAKGDT 105
G A+A L + + A + F+ I + N + + A D
Sbjct: 777 TGLKLARANRLLKTKQTSAALAEFKAIETDLNSGILSGTPEEQINTFLGTARSASDLNDI 836
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A + + + P A L+ A++LVD +Y+++ ++L L A
Sbjct: 837 PLAIAAYQQALDRRRDPQ-----AALELANLLVDQEAYDDVRRLLSILPGGYESRLIQAR 891
Query: 166 EILGISALKFGKVQKAKTIFEELAKD 191
G + +A T E L +
Sbjct: 892 -----LDFADGNIDQALTSLETLTNE 912
>gi|71898144|ref|ZP_00680330.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71732118|gb|EAO34174.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 212
Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 16/204 (7%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+ G+ W+ + ++ + + F ++ V + + A + KL A+
Sbjct: 11 EHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFAVFGKLLQAKE 70
Query: 75 ------SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ K+ LY L + +A G+T A +I + +
Sbjct: 71 LGNAAQALAKLNGAPAGLYAELGALQLAKAQSEAGNTAEAIKILRTL----PVDSQFKLI 126
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A + A +LV T +E +K+L ++ + EI G + L GK ++A+ + +
Sbjct: 127 ADQRLARLLVATGKADEANKLLATRNDDVS------FEIQGDALLVLGKREQARERYAKA 180
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+S ++ L ++ +
Sbjct: 181 LAMGDSAAPQRRILEIKLMDVGGT 204
>gi|307258932|ref|ZP_07540663.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306866956|gb|EFM98813.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 495
Score = 43.0 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 59/158 (37%), Gaps = 5/158 (3%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L K+D+A ++ + +D+ + + + L +G A F V+ +D
Sbjct: 5 IALGKQGKVDEAIVAYRNVNREDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDS 64
Query: 121 APLAVRYAATLQAASILVDTSSYEE-ISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+ A + L +E I E S ++ +LG+ K+
Sbjct: 65 --TELYAIAQVNLGITLRKQGRGDEAIVAYRNVNREDSAKLYVKVQFLLGLIFESQDKLD 122
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+A+ F + ++ + T++Q+ L + + +
Sbjct: 123 EARDAFNNIRLSDSV--ELYTKAQVYLKVLNIGKKEIR 158
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 44 GSHEKKKNIVGENFAQA-----LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ E + +A + L K D+A ++F + +D+ ++ + +
Sbjct: 19 AYRNVNREDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDSTELYAIAQVNLGIT 78
Query: 99 LVAKGDTKNAAEIFLKVANDDLA 121
L +G A + V +D A
Sbjct: 79 LRKQGRGDEAIVAYRNVNREDSA 101
>gi|284036952|ref|YP_003386882.1| hypothetical protein Slin_2038 [Spirosoma linguale DSM 74]
gi|283816245|gb|ADB38083.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
Length = 1024
Score = 43.0 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 5/160 (3%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNP-LSNMYIASILVAKGDTKNAAEIFLK 114
F A ++ S K + A SF + + N + Y+A D NA +
Sbjct: 755 QFENARNIYASGKYEQAIQSFLNFMQEYPASPNTNQARYYVAESYRQTNDVANALRYYNL 814
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSY--EEISKILQKLSEPSNPMHQFANEILGISA 172
V D+ + VR A +AA + V +Y + L + S A L +
Sbjct: 815 VIADNKSDYLVR--AATRAAELEVKQKNYGRAVRNYQLIQSRAGSKAEQVTAQLGLMDTY 872
Query: 173 LKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
+ K+ A + E+A N G R+Q++L + S
Sbjct: 873 FVYPKLDSAAIVAREIAAGGNVVPGAQNRAQLMLGKVALS 912
Score = 42.3 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 2/128 (1%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L+ + DD + E +L ++N ++ A + + A + N
Sbjct: 243 AQSLYRQRRYDDLLAYTEPLLKRNNGAGMNEVALFTAEVFYQQNQFARAIPYYKSYVNTA 302
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A A + L T +Y + L+ L+ + Q+A LG+S L+
Sbjct: 303 GAKAP--GAVKFRYGQSLFRTGAYNDAIAQLKTLAGGKDTTAQYAAYTLGVSYLQTQNPT 360
Query: 180 KAKTIFEE 187
A F++
Sbjct: 361 YALNAFDQ 368
>gi|51473430|ref|YP_067187.1| hypothetical protein RT0223 [Rickettsia typhi str. Wilmington]
gi|51459742|gb|AAU03705.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 220
Score = 43.0 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 62/162 (38%), Gaps = 6/162 (3%)
Query: 54 GENFAQALEL-FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
G+ + + L + A ++ E +++ N ++ + ++ +++ A E+
Sbjct: 57 GDILVKTIGLDTTKANNELAFNTLENLVTSSNTKIKEIAALEQVALKISEKKYLEAKELL 116
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYE-----EISKILQKLSEPSNPMHQFANEI 167
K+ + A + I++D + + ++ K L + P A I
Sbjct: 117 NKIIENKEYSEISTSYARISWCCIVLDDQNLDIQDKEKLQKYLDYFDDEKKPFWATATII 176
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
I +K +A+ + L NN + +++ +L N+
Sbjct: 177 KSILDIKHNMKTQAEKNLKNLLASNNVSDLLKDQAKALLVNL 218
>gi|163783489|ref|ZP_02178480.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881253|gb|EDP74766.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1]
Length = 850
Score = 43.0 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 11/171 (6%)
Query: 51 NIVGEN-FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
GE + + F K +A + F+++L D + + + IA G+ + A
Sbjct: 490 EESGEEIYLMGMSFFIEGKYREAIAYFKRLL--DRGEFKSKALLRIADSYYNLGNYERAK 547
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEI 167
E++ ++ ATL A I + +++ K+++ P +PM
Sbjct: 548 ELYKEILTFYPDSTEAFD-ATLALAQIELQK-PTKDLEKLVRDFERKFPGSPMITDLKYQ 605
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
L +K G+ +A+ I EEL + ++ + LA I +R ++
Sbjct: 606 LANLYIKEGRRSEARRILEELL----TKETYRAKALIKLAEIEEDPRRKEE 652
>gi|71274605|ref|ZP_00650893.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71900905|ref|ZP_00683020.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71164337|gb|EAO14051.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71729317|gb|EAO31433.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 212
Score = 43.0 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 16/204 (7%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+ G+ W+ + ++ + + F ++ V + + A + KL A+
Sbjct: 11 EHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFAVFGKLLQAKE 70
Query: 75 ------SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ K+ LY L + +A G+T A +I + +
Sbjct: 71 LGNAAQALAKLNGASAGLYAELGALQLAKAQSEAGNTAEAIKILCTL----PVDSQFKLI 126
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A + A +LV T +E +K+L ++ + EI G + L GK ++A+ + +
Sbjct: 127 ADQRLARLLVATGKADEANKLLATRNDDVS------FEIQGDALLLLGKREQARERYAKA 180
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+S ++ L ++ +
Sbjct: 181 LAMGDSAAPQRRILEIKLMDVGGA 204
>gi|328552259|gb|AEB22751.1| transcriptional regulator of the glucitol operon [Bacillus
amyloliquefaciens TA208]
gi|328910598|gb|AEB62194.1| transcriptional regulator of the glucitol operon [Bacillus
amyloliquefaciens LL3]
Length = 825
Score = 43.0 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 12/141 (8%)
Query: 62 ELFNSNKLDDARSSFEK----ILSQDNKLYNPL---SNMYIASILVAKGDTKNAAEIFLK 114
L N LD A E + ++ L + +L+ GD + AA +
Sbjct: 626 ALMEVNDLDGALQQVETGLKILEQSGAPDHDDLKVWGLALQSRLLLKTGDPEKAAAMLDD 685
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ-FANEI---LGI 170
+ D +R+ L + S YEE + + + S E LG+
Sbjct: 686 I-KDQPVSPIIRHRVLLVRGDLSFAHSHYEEAITLYEAANTTSAAYGGEKTIEAYFNLGM 744
Query: 171 SALKFGKVQKAKTIFEELAKD 191
+ +K +++KA+ FE++ D
Sbjct: 745 AYVKCNQLEKAEKAFEQMLYD 765
>gi|116625490|ref|YP_827646.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228652|gb|ABJ87361.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 701
Score = 43.0 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 66/163 (40%), Gaps = 16/163 (9%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIF 112
+ QA +L+ + + +A F+ + ++D K Y +++ +A ++F
Sbjct: 26 QTLDQAEQLWKARRFKEANEVFKALEAKDPKNPDYKV----RWGRMMLDHAQPTDAEDLF 81
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
+ A + A L+ S+E + L + + S+P A E+L A
Sbjct: 82 GE------ALEIKKDHAGALVGMALIAADSFEARAGDLARKALASDPKLTEAQELLARLA 135
Query: 173 LKFGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILANIIASDQ 214
L+ KA ++ +A D P + ++ + +++A +
Sbjct: 136 LEDNDNVKATEEAKKAIAMD---PNSVQGKAILATIDLLADKK 175
>gi|193213294|ref|YP_001999247.1| hypothetical protein Cpar_1652 [Chlorobaculum parvum NCIB 8327]
gi|193086771|gb|ACF12047.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327]
Length = 229
Score = 43.0 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 24 IAPLLILMILSLAIWFYLFDGSH--EKKKNIVGENFAQALELF-NSNKLDDAR--SSFEK 78
I L+ +++L+ FY S E++ + A+E+ + D+A+ S+ +
Sbjct: 30 IIILVSVILLAAGGSFYWLQKSRVDEQQASAALSKLIPAIEVASETGDTDNAKLVSNMQT 89
Query: 79 ILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
I+ + + +Y+A++ G T A ++ KV +D+
Sbjct: 90 IIKRWGYTPSGNKTRLYLATLWYNNGKTSEALALYEKVKSDNKDLQ 135
>gi|163856332|ref|YP_001630630.1| hypothetical protein Bpet2021 [Bordetella petrii DSM 12804]
gi|163260060|emb|CAP42361.1| putative membrane protein [Bordetella petrii]
Length = 212
Score = 43.0 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 8/204 (3%)
Query: 12 GKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFAQALELFNSNKL 69
K + + L + L+ W+ + +G E A L ++
Sbjct: 14 IKAWWARYGTL-VVTLAAIAALAWGGWWGWKAYQTHRANQAMGYFEALEDAARLGGTDST 72
Query: 70 DDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+++ + S Y + A L + D A E +A A++
Sbjct: 73 VRIKAAASTLRSDYPSTGYAARGALVAAHALEQQNDIAGAREQLEWLAGQSKQ-AALQPV 131
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
A ++ A +L+D Y+ L +L P + G GK + A+ ++
Sbjct: 132 ARVRLAGLLLDQKQYD---AALAQLDNPPAAFAALYADRRGDILAAQGKPEDARKAWQAA 188
Query: 189 AKDNNSPFGISTRSQMILANIIAS 212
+ + Q+ L + +
Sbjct: 189 LDGLAANDPLRQAVQLKLDALSGA 212
>gi|159185684|ref|NP_357303.2| cellulose biosynthesis protein [Agrobacterium tumefaciens str. C58]
gi|159140818|gb|AAK90088.2| cellulose biosynthesis protein [Agrobacterium tumefaciens str. C58]
Length = 548
Score = 43.0 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ QAL+L+ S K +A +F ++LS + +A++ +G+ + A FL +
Sbjct: 366 YEQALKLYKSGKKSEASIAFGQVLSAAPDHLG--AQFGLANLAFDRGEFREAEIAFLSLI 423
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL---GISAL 173
P+ + L+ + Y E S+ ++++ P H E L ++ +
Sbjct: 424 AAGHEPVVL----WLRIGETRLAQQHYHEASEAFRQVTN-RAPFH---REALYKCAVALI 475
Query: 174 KFGKVQKAKTIFEELA---KDNNSPFGISTRSQMILANI 209
+ +A I E L D+ + + +++ LA +
Sbjct: 476 AAERQMEAAEILERLQHYHSDDAAHLEYAEKARAALARL 514
>gi|288818942|ref|YP_003433290.1| tetratricopeptide repeat protein [Hydrogenobacter thermophilus
TK-6]
gi|288788342|dbj|BAI70089.1| tetratricopeptide repeat protein [Hydrogenobacter thermophilus
TK-6]
gi|308752528|gb|ADO46011.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
Length = 189
Score = 43.0 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 60/169 (35%), Gaps = 9/169 (5%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
LL+ + L F + ++ + + Q S +A+ +K+ +++
Sbjct: 8 IALLLAGVCLLVGAFLGWRWWESRRLSKISYQEYQIRREIQSGNYQEAQKLIKKVAEEES 67
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKV---ANDDLAPLAVRYAATLQAASILVDTS 141
Y PL Y + G + + + D R + A
Sbjct: 68 P-YTPLVLSYRLYLEREGGLQVDEVKTLQSIISSLKDKDILSLYRE----RLAYAYFTAG 122
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+Y++ ++L+ + S A + G+ K G+ +AK ++ ++ K
Sbjct: 123 NYQKALELLESIKGDSLNY-YSAQILKGLVLEKVGRRDEAKAVYSQVEK 170
>gi|256819391|ref|YP_003140670.1| hypothetical protein Coch_0551 [Capnocytophaga ochracea DSM 7271]
gi|256580974|gb|ACU92109.1| Tetratricopeptide TPR_2 repeat protein [Capnocytophaga ochracea DSM
7271]
Length = 1001
Score = 43.0 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY-NPLSNMY 94
A W + G + A + N +A S FEK L + + +
Sbjct: 703 ASWAKGLGYVEVTDLELEGATYEAAERQYMQNNTKEAISGFEKYLKEFPNGMRRTNAEFF 762
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL- 153
+A + G A + V + + IL++ SY + L+ L
Sbjct: 763 LAQMYFNSGQKAKALTHYENVTKSGSNEYGEQSLTRV--CQILLEAGSYLKAKPYLEDLE 820
Query: 154 -SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ +A L KA ++ ++ + I + ++LA
Sbjct: 821 RTATIAQNKTYAQSNLMRVCYNEKLYDKAIEYANKVLEEKSIDTRIKNDAYIVLA 875
>gi|189424524|ref|YP_001951701.1| type II and III secretion system protein [Geobacter lovleyi SZ]
gi|189420783|gb|ACD95181.1| type II and III secretion system protein [Geobacter lovleyi SZ]
Length = 769
Score = 42.7 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 41/185 (22%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
++IA L++ + L ++ + +N+++ +L KL++A + + +
Sbjct: 5 RYIAILVVALALFISG------------CSAARKNYSEGRDLEEQGKLEEAMYRYAEAVK 52
Query: 82 QDN--KLYNPL---SNMYIASILVAKGDT-------KNAAEIFLKVAN-DDLAPLA---- 124
Y + M A +GDT A + A D P
Sbjct: 53 AAPEESEYRVKFLNTRMAAARGREQEGDTLLKTGNYAGAVAAYQTAAGLDPSQPRLVQKA 112
Query: 125 -----VRYAATLQAASILVDTS----SYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+R AA + ++ L+ + A I+AL+
Sbjct: 113 NNAIRLRDAAAAYQEGLTLEKGNKLRDAATAFGRALDLAAENPEYRSAAQR---IAALRK 169
Query: 176 GKVQK 180
K+
Sbjct: 170 SKLDG 174
>gi|308172496|ref|YP_003919201.1| glucitol operon transcriptional regulator [Bacillus
amyloliquefaciens DSM 7]
gi|307605360|emb|CBI41731.1| transcriptional regulator of the glucitol operon [Bacillus
amyloliquefaciens DSM 7]
Length = 825
Score = 42.7 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 12/141 (8%)
Query: 62 ELFNSNKLDDARSSFEK----ILSQDNKLYNPL---SNMYIASILVAKGDTKNAAEIFLK 114
L N LD A E + ++ L + +L+ GD + AA +
Sbjct: 626 ALMEVNDLDGALQQVETGLKILEQSGAPDHDDLKVWGLALQSRLLLKTGDPEKAAAMLDD 685
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ-FANEI---LGI 170
+ D +R+ L + S YEE + + + S E LG+
Sbjct: 686 I-KDQPVSPIIRHRVLLVRGDLSFAHSHYEEAITLYEAANTTSAAYGGEKTIEAYFNLGM 744
Query: 171 SALKFGKVQKAKTIFEELAKD 191
+ +K +++KA+ FE++ D
Sbjct: 745 AYVKCNQLEKAEKAFEQMLYD 765
>gi|47227439|emb|CAG04587.1| unnamed protein product [Tetraodon nigroviridis]
Length = 553
Score = 42.7 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 15/107 (14%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKV----ANDDLAPLAVRYAATL-------QAASILVD 139
+ + +IL+ +G+T+ A E F +V A+++ A + L AA D
Sbjct: 108 ARLQRGNILLKQGNTQEAREDFNEVLQRSADNEEAQQQLMKTHELVGLQEEAHAAYHQGD 167
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
S+ + + + +P E+ ++ G QKA
Sbjct: 168 YSTTISVLERV----IEISPWDPDVRELRAECYIRMGDPQKAIQDLA 210
>gi|225849348|ref|YP_002729512.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643614|gb|ACN98664.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 556
Score = 42.7 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ D+A ++ +L + + + L+ ++ + V D +NA++ K+ +
Sbjct: 212 QQKRYDEAIKLYKSVLQDNPQNLDALNRLFQ--VYVDIDDFENASKTIDKIITLNPKDND 269
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISALKFGKVQKAK 182
A L+ + + Y++ +IL+ L + NP + FA +LG++ +KAK
Sbjct: 270 ----ALLKKFLLYI---KYDKAKEILEDLQKTVKENPDNLFAKFMLGMAYESLNDYKKAK 322
Query: 183 TIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
I+EEL + + R + N+ D+
Sbjct: 323 EIYEELYQQQPDNQELVDRLTQVYVNLKEYDKA 355
>gi|330894496|gb|EGH27157.1| hypothetical protein PSYMO_38995 [Pseudomonas syringae pv. mori
str. 301020]
Length = 213
Score = 42.7 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W G + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQFWHRYQAGQSQGASMLYQQLLETALTPSGQADTARVAEISGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +AA VA D A + A + A +L +
Sbjct: 87 GTTYAQFGSLFVAKVAVDAGKLDDAAAELKTVA-DKPANDTLGEIARQRLARVLAAQNKT 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G ++ G+ +A +++
Sbjct: 146 DDALKLLDGDA--DKAFLASREELKGDLLVQLGRTDEAYAAYQK 187
>gi|228939335|ref|ZP_04101927.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972213|ref|ZP_04132828.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978828|ref|ZP_04139197.1| TPR repeat-containing protein [Bacillus thuringiensis Bt407]
gi|228780904|gb|EEM29113.1| TPR repeat-containing protein [Bacillus thuringiensis Bt407]
gi|228787526|gb|EEM35490.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820359|gb|EEM66392.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 890
Score = 42.7 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 26/180 (14%)
Query: 24 IAPLLILMILSLAIWFYL-----FDGSHEKKKNIVGENFAQALELFNSN-KLDDARSSFE 77
I + I++I +++ + E+ + + + +L A +
Sbjct: 509 IGSITIVVIGGATAYYFYTTNAKYQHFMEQARQAYHD---KKYKLAEEAVGHAIAVKGKD 565
Query: 78 KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
+ +++ +A+I VA+G K A + K+ D AA L A++
Sbjct: 566 E------------AHLQLATIYVAEGKNKIAIDYITKLIKDREIDKENNEAAYLLASA-N 612
Query: 138 VDTSSYEE----ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
Y+E + L ++ P + A L +S +K + +KA+ + +++ N
Sbjct: 613 FRIGKYQEAVPNFEQALANNAKGIEPYKKDAMRDLAVSHMKMKEFEKAEDVIVKMSTKTN 672
>gi|160871620|ref|ZP_02061752.1| transmembrane protein [Rickettsiella grylli]
gi|159120419|gb|EDP45757.1| transmembrane protein [Rickettsiella grylli]
Length = 208
Score = 42.7 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 4/149 (2%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + K + I +I I W Y S E +I + +
Sbjct: 6 EIEQAEHVKKWFRDYGGGIVLGIIFAIFVSLGWNYWHQ-SRENNLSIASMQYEHLVVAII 64
Query: 66 SNKLDDARSSFEK--ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
SN+ + I + Y L+ + +A I V + + AA V D
Sbjct: 65 SNENITTLKKRAEEIIKNYAYTPYASLAALQLAKIAVNQNNLVLAANRLTWVV-DHGHDQ 123
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQK 152
+R A ++ IL+ + E K + +
Sbjct: 124 TLRSIAKMRLVRILLAQNRPIEALKRVSQ 152
>gi|94269422|ref|ZP_01291458.1| hypothetical protein MldDRAFT_1984 [delta proteobacterium MLMS-1]
gi|93451226|gb|EAT02129.1| hypothetical protein MldDRAFT_1984 [delta proteobacterium MLMS-1]
Length = 223
Score = 42.7 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 76/185 (41%), Gaps = 13/185 (7%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
LI+ IL+ + G E+ E AQA+ L + + ++ E++ +
Sbjct: 47 AALIVAILAYSFGTQFATGREEQ----ASEQLAQAMRLDDEAQR---LAAMEEVADSYRR 99
Query: 86 -LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
S + +A G+ + AA + ++ + L A +L++ + E
Sbjct: 100 TGAGIWSRIELAHHQRGSGELEAAATAYEELLDSLSRHDPRHPMVRLSLAQVLLELGAKE 159
Query: 145 EISKILQKLSEPSNPMHQFANEILGISAL--KFGKVQKAKTIFEELAKDNNSPFGISTRS 202
+ ++L+ A +LG + + + G+ A+ ++++A+ ++P + ++
Sbjct: 160 RAVEQYRQLAAVEG---YQAWGLLGSAEILRRQGETAAAREKYQQVAELADAPPLLVEQA 216
Query: 203 QMILA 207
+ LA
Sbjct: 217 ERRLA 221
>gi|332878926|ref|ZP_08446641.1| putative tol-pal system protein YbgF [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332683277|gb|EGJ56159.1| putative tol-pal system protein YbgF [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 1000
Score = 42.7 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY-NPLSNMY 94
A W + + A N +A +FEK L Q + Y
Sbjct: 702 AAWAKSLGYVEVTDLELESATYEAAERQLLQNNNKEAIVAFEKYLQQFPNGMRRTNAEFY 761
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL- 153
+A L G A + V + + IL+D SY + L++L
Sbjct: 762 LAQALYNTGKKAEALTHYENVTKAGS--SEFGEPSLTRVCQILLDAGSYLKAKPYLEELE 819
Query: 154 -SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ +A L KA ++ + + I + ++LA
Sbjct: 820 KTATIAQNKTYAQSNLMRVCYNEKLYDKAIEYANKVLSEKSIDTRIKNDAYIVLA 874
Score = 38.8 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 12/165 (7%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQ-ALELFNSNKLDDARSSFEKILSQDNKL--YNPL 90
+ + F K + + F A FN +A +FEK L Q+ K +
Sbjct: 478 AATYFQQFFANPSASKTDEYPKAFYGLAYANFNQRHYAEAIVNFEKYLKQNPKDEDFKHD 537
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA--SILVD--TSSYEEI 146
+ + +A G A E + K+ A A Q A VD + E++
Sbjct: 538 AMLRLADSYFVTGKYWPAMEGYNKLIESKSADQ---DYAAYQKAISYGFVDRPNNKIEDL 594
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+ ++ P++ + A LG + + G K +++LAKD
Sbjct: 595 ERFIKNY--PTSNLRPNALYELGNTYVTQGDTDKGLQYYQQLAKD 637
>gi|304414050|ref|ZP_07395418.1| hypothetical protein REG_1110 [Candidatus Regiella insecticola
LSR1]
gi|304283264|gb|EFL91660.1| hypothetical protein REG_1110 [Candidatus Regiella insecticola
LSR1]
Length = 212
Score = 42.7 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 18/198 (9%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG----------ENFAQALELFNSNKLDD 71
K + ++L+I L W Y + + KN +N A+ + N D
Sbjct: 23 KILVVSVLLIITVLIGWHYWQNNQNTAMKNAASSYQQVSEILTDNKKAAVTKSDDNTNDV 82
Query: 72 ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATL 131
A E+ + +++ Y + +A+ V + A + +A + L
Sbjct: 83 A----EQFVRENDNNYAVFIALELANRFVVQKIFDKAEQQL-MLALTKTKDTNLLSLTNL 137
Query: 132 QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+ A + + ++ K L S A ++ G L G + A+ + + A +
Sbjct: 138 RLAKLQLQLKKPDQALKTLN--SVEGEAWVAMAEDVRGDIFLNKGDIPAARAAYTK-ATE 194
Query: 192 NNSPFGISTRSQMILANI 209
N+ + T ++ L N+
Sbjct: 195 VNAAQTLQTLLRLKLDNL 212
>gi|114571477|ref|YP_758157.1| thioredoxin [Maricaulis maris MCS10]
gi|114341939|gb|ABI67219.1| thioredoxin [Maricaulis maris MCS10]
Length = 315
Score = 42.7 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 5/131 (3%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+AL + L+ A +L D + ++ + + GDT AA I +V D
Sbjct: 148 RALASIEAGDLNGASQDLAAVLQADPGHPGAIGSLVR--LWIKAGDTDKAASILAQVPAD 205
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
A+ A +AA L + ++ + + ++ + A L + L G
Sbjct: 206 RADDPAI-DGA--RAALELATGAPVDDAETAALRQAVAADSSNFQARYDLAEALLTGGDH 262
Query: 179 QKAKTIFEELA 189
+ A +
Sbjct: 263 KGAVDQLIAIT 273
>gi|313676599|ref|YP_004054595.1| hypothetical protein [Marivirga tractuosa DSM 4126]
gi|312943297|gb|ADR22487.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
tractuosa DSM 4126]
Length = 232
Score = 42.7 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 70/177 (39%), Gaps = 16/177 (9%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSS-------F 76
+ ++ L+I++ + Y + + + QA+ + + + D A +
Sbjct: 42 LGGIIALIIVAFFGYRYYMNNLN----QEAQKEMFQAVYWYENEEYDLALNGDGNNFGFL 97
Query: 77 EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASI 136
+ + L++ Y+ SI + +G+ + A + ++DDL A R A + A
Sbjct: 98 AIVEDYGSTKAGNLASFYLGSIYLQQGEFETAIDYLEDFSSDDLLVQA-RAYALIGDAY- 155
Query: 137 LVDTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFGKVQKAKTIFEELAKD 191
++ +Y + K + + ++ G++ K ++ A + ++ KD
Sbjct: 156 -MELGNYSTAADHYGKAANYKSNKEFSPEYLMKQGLAYEKANDLEAAMGSYRKVVKD 211
>gi|315185627|gb|EFU19395.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 304
Score = 42.7 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Query: 84 NKLYNPLSNMYIASI-LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
K Y + + +GD ++E FL+ A D + A ++ L++
Sbjct: 152 AKGYEAADLLEYLGLSAAREGDYSKSSEFFLR-AKDQGKDSPLLDLALARS---LIELGD 207
Query: 143 YEEISKILQKLSEPSN-PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
Y+ +L L+E SN A +LG + + + A+ E+L + S
Sbjct: 208 YDRAHDLLSPLAEQSNREYQVEALLLLGELHYRAQRYEDARDYLEKLVQIQES 260
>gi|15966702|ref|NP_387055.1| hypothetical protein SMc03144 [Sinorhizobium meliloti 1021]
gi|307300262|ref|ZP_07580042.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307321139|ref|ZP_07600543.1| tetratricopeptide TPR_4 [Sinorhizobium meliloti AK83]
gi|15075974|emb|CAC47528.1| Hypothetical protein SMc03144 [Sinorhizobium meliloti 1021]
gi|306893214|gb|EFN23996.1| tetratricopeptide TPR_4 [Sinorhizobium meliloti AK83]
gi|306904428|gb|EFN35012.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 399
Score = 42.7 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 16/169 (9%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ +G +A+ L A + + +++ + +A +L GD A
Sbjct: 186 RRSLGIVLERAVALHAFGDFHGAEAGYRQLIRTVPGHIE--ARCRLAHLLSDVGDYVEAE 243
Query: 110 EIFLKVA-NDDLAPLAVRYAATLQAASILVDTS--SYEEISKILQKLSEPSNPMHQFANE 166
++ + A + + Q A + +++E+ P
Sbjct: 244 HLYRTLLPAVPNADDVLHWLGDTQMAQASYRKAGKTFQELLARY--------PHRGILRY 295
Query: 167 ILGISALKFGKVQKAKTIFEE---LAKDNNSPFGISTRSQMILANIIAS 212
L ++ L G+ A F+ + D+ + F TR+Q IL ++
Sbjct: 296 KLAVARLASGQRDAAIATFQSFHDIVSDDANHFLCKTRAQEILIRLMGV 344
>gi|307257230|ref|ZP_07539001.1| hypothetical protein appser10_12290 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864272|gb|EFM96184.1| hypothetical protein appser10_12290 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 207
Score = 42.7 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 6/152 (3%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE--L 63
+ ++ K I +I+ + W + + + + +E L
Sbjct: 10 EEQQFEEAKNWFKENGTPILVAVIIACAATLGWNFWQNH-QVQAAQQTSAIYQNVMESYL 68
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ K F I + Y S + A V K D AA+ L+ A +
Sbjct: 69 QDPEKNQPLIEKF--ISENKDSSYAVFSQLESAKQAVEKADFA-AAKTVLQSALTSTSDA 125
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSE 155
+++ + A++ +Y++ L ++++
Sbjct: 126 SLQTIIRFRLATLDYQLKNYDDALATLGQITD 157
>gi|91216378|ref|ZP_01253345.1| putative TPR-repeat protein [Psychroflexus torquis ATCC 700755]
gi|91185516|gb|EAS71892.1| putative TPR-repeat protein [Psychroflexus torquis ATCC 700755]
Length = 1003
Score = 42.7 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 62/175 (35%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL-SNMY 94
A W D +I + A F N+ D A F+K L + N L SN Y
Sbjct: 701 ATWVRGLDFVEVADSDIEEATYEAAENKFLDNETDKAIEGFKKYLEEFPNGKNSLKSNFY 760
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
+A L + + + +V N + L A I + +Y++ L +L
Sbjct: 761 LAQSLFNSDQRQASVPYYEEVINSRSSEFTEESLRRL--AQIYLSEKNYDQAITSLNRLE 818
Query: 155 EPSNPMH--QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+N FA L + + + E + +N + + +++ +A
Sbjct: 819 TEANFSQNVVFAQSNLMKAYYEIENFDRTVIYAELILSKDNIDEEVLSDAKIFIA 873
>gi|256840799|ref|ZP_05546307.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738071|gb|EEU51397.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 485
Score = 42.3 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 15/142 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYN---PLSNMYIASILVAKGDTKNAAEIFL-KVAND 118
L + A +++ ++ Y L ++ GD + A E F + D
Sbjct: 172 LETEGDVPRAIELCNELIDKNPFSYEYWFTLGRLHSMV-----GDYEKAIEAFDFALTCD 226
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D + A L SYE+ + Q++ M + + ++ +K +
Sbjct: 227 DSDTEL-----KILKAYCLYMNESYEKAIEEYQEIEGDEEVMRRIS-PLMAECYMKLEQY 280
Query: 179 QKAKTIFEELAKDNNSPFGIST 200
+KA +F + D + G +
Sbjct: 281 EKAYQLFSTIINDPDMEDGPTN 302
>gi|311694783|gb|ADP97656.1| TPR repeat protein [marine bacterium HP15]
Length = 891
Score = 42.3 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 9/154 (5%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
L A+ L + ++A E + + + N+ +A +
Sbjct: 485 RELQQSLENGYPENRSAQLLAAISLAGTGDTEEAIKKLEGLRDTNPESIEV--NITLAQL 542
Query: 99 LVAKGDTKNAAEIFLKVAN--DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
G A F+ A + PL R AA L AA+ +++ E+ +K + + +EP
Sbjct: 543 YQEAGQPAKAVNSFVAAAKQTEPKLPLLFR-AARLHAANHQNESA-VEDWTKSVSQ-AEP 599
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
A EIL + + +++ A++ E+ K
Sbjct: 600 ELADALAATEILWLIS--EDELETARSRLAEVGK 631
>gi|224437952|ref|ZP_03658894.1| hypothetical protein HcinC1_08263 [Helicobacter cinaedi CCUG 18818]
gi|313144396|ref|ZP_07806589.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129427|gb|EFR47044.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 237
Score = 42.3 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 29/204 (14%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
+S+ + ++ Y+ + ++ WF + +K +A +
Sbjct: 15 KSDEKLLENAFRLEILWRRYRKYVYVAVVCGAVGLGWFGISSYIQAQKAQEASAAYAVLM 74
Query: 62 ELFNSNKLDDARSS--------------------FEKILSQDNKLYNPLSNMYIASI-LV 100
+ + + ++ +EK+ + NKL L+ +A++ L
Sbjct: 75 QDSENKEALESLQKASPNLYDMYMYFNANGDKTNYEKLANSQNKLIKNLAKYEVATLNLS 134
Query: 101 AKGDTKNAAEIFLKVANDDLAP----LAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
K K+A + A+R A LQ A +L E + L L
Sbjct: 135 EKIQDKDAIKNTDFTGEFKSLENVEYKALRDLAILQEAYVLFQQDKIAEAHQKLM-LIAE 193
Query: 157 SNPMHQFANEILGISALKFGKVQK 180
++P A E + + F K
Sbjct: 194 NSPF---AAEAMILKHYGFEDSAK 214
>gi|153833527|ref|ZP_01986194.1| tetratricopeptide TPR_2 [Vibrio harveyi HY01]
gi|156973382|ref|YP_001444289.1| hypothetical protein VIBHAR_01069 [Vibrio harveyi ATCC BAA-1116]
gi|148870178|gb|EDL69119.1| tetratricopeptide TPR_2 [Vibrio harveyi HY01]
gi|156524976|gb|ABU70062.1| hypothetical protein VIBHAR_01069 [Vibrio harveyi ATCC BAA-1116]
Length = 204
Score = 42.3 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 74/197 (37%), Gaps = 6/197 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D S + +++ +
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIIGAVVGLGGLFGWRYYQD-SVIQASEAASQSYTTVMNA 63
Query: 64 FNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ K DA++ + + + K Y+ L+ + +A + V D A E K A +
Sbjct: 64 LQT-KGADAQADIQAFIDSNEVKEYSVLAALQLAKVQVDAKDLSAALEQL-KWAQSNTKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
A+ + + A I + +++ + L K++ E+ G AL+ G + A
Sbjct: 122 AALSPLISYRIARIEAEMGNFDAANAELGKVT--DAAWTGRIAELRGDIALRQGDKEAAY 179
Query: 183 TIFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 180 AAYTEAQQAADASPTLQ 196
>gi|148658023|ref|YP_001278228.1| hypothetical protein RoseRS_3925 [Roseiflexus sp. RS-1]
gi|148570133|gb|ABQ92278.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
Length = 1180
Score = 42.3 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 5/129 (3%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-K 114
+AL + +A ++F+++ L L A I A+GD + + F
Sbjct: 238 RLVRALADYKRGAYSNAIATFDELERDYPALRPGLLRTLRAVIWWARGDYEQSVGEFQRA 297
Query: 115 VANDDLAPLAVRYAATLQA--ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
+A A A A L A ++ D + ++ + L +
Sbjct: 298 IAAMPDASPA--ELARLYASLGAVQYDMGDPASRESFNRAIALLQDQDLGVLRYSLALEE 355
Query: 173 LKFGKVQKA 181
L+ G A
Sbjct: 356 LRAGDPADA 364
>gi|50122140|ref|YP_051307.1| hypothetical protein ECA3218 [Pectobacterium atrosepticum SCRI1043]
gi|49612666|emb|CAG76116.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 206
Score = 42.3 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 4/149 (2%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + ++ Q E K +A +S EK +++ Y L+++ +A
Sbjct: 39 WRFWQSHQNDSVQAASASYQQVTEQLAEGK-AEAIASTEKFTAENKNTYGALASLELARH 97
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V + D A + ++ + + L+ A + + + ++ K L +
Sbjct: 98 YVDQKDFAKAVQQLVQAQSQTK-DADLLAVVNLRLARVQLQENKADDALKTLDAIKLEG- 155
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
A E+ G G Q A+ + +
Sbjct: 156 -WASQAAEVRGDILASKGDNQAARDAYNK 183
>gi|188996311|ref|YP_001930562.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931378|gb|ACD66008.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 938
Score = 42.3 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 12/113 (10%)
Query: 45 SHEKKKNIVGENFAQALELFNS----NKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
E + E+ +L S N+LD A+ L+ +N+ Y S + +A I
Sbjct: 702 YQEVAASNSKESALATYKLAESYYKLNQLDKAKQVLIDYLNTNNEEYKVPSKLLLAEIYE 761
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+ D N+ +I+ ++ +D + A IL+ Y++ S ++L
Sbjct: 762 KQNDLDNSIKIYEELKENDDV--------KFKLAKILLQKGDYDKASAYFKEL 806
Score = 41.9 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 48 KKKNIVGENFAQALELF---NSNKLDDARSSFEKILSQDNKLYNP--LSNMYIASILVAK 102
K + ++ A L + +D S + L++ Y + + +A I K
Sbjct: 634 TKYSGTKDSIDAAYNLIILESKGSSEDVESMIKSFLAK-YPNYPLANILKIQLAEIYQNK 692
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN-PMH 161
G ++A +I+ +VA + A+ AT + A + ++ ++L +N
Sbjct: 693 GKIEDAIKIYQEVAASNSKESAL---ATYKLAESYYKLNQLDKAKQVLIDYLNTNNEEYK 749
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ +L K + + I+EEL ++++ F + ++++L
Sbjct: 750 VPSKLLLAEIYEKQNDLDNSIKIYEELKENDDVKFKL---AKILLQ 792
>gi|65319495|ref|ZP_00392454.1| COG0457: FOG: TPR repeat [Bacillus anthracis str. A2012]
Length = 216
Score = 42.3 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 11/197 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+ ++ + K K I + +++ + + + K E QA
Sbjct: 19 LTVAHEQSEPSAFSTWWKKNKKRILIIGSTVVVVIGGSTLFYFYTTNAKYQKFMEQARQA 78
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ K ++A + +D + + +A+I VA+G K A + K+ D
Sbjct: 79 YDNKKYTKAEEAVGHAIAVKGKDE------AYLQLATIYVAEGKNKIAIDYITKLIKDRE 132
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKL----SEPSNPMHQFANEILGISALKFG 176
AA L A++ Y+E + ++ ++ P + A L +S +K
Sbjct: 133 IDKENNEAAYLLASA-NFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAVSHMKMK 191
Query: 177 KVQKAKTIFEELAKDNN 193
+ +KA+ + +++ N
Sbjct: 192 EFEKAEDVIVKMSTKTN 208
>gi|220935215|ref|YP_002514114.1| tetratricopeptide repeat family protein [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996525|gb|ACL73127.1| tetratricopeptide repeat family protein [Thioalkalivibrio sp.
HL-EbGR7]
Length = 209
Score = 42.3 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 7/188 (3%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E D + K + K + ++L + L W Y D +E + + F
Sbjct: 3 EYTTDEEKVEAIKKWWQENGKAVIAGIVLGVGGLFGWRYWVD-LNETRAERASDLFLAVD 61
Query: 62 ELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L+ AR + + + + Y PL+ + +A + A+G+ +A E + A
Sbjct: 62 RASRAGDLEQARQQADLLRADYARTPYAPLAALELARLQAARGELDSAEENL-RWAIGQG 120
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS-NPMHQFANEILGISALKFGKVQ 179
V + A ++ A +LV + E + L+ ++ E+ G + G
Sbjct: 121 RSEEVTWTARVRLARVLV---ALERADEALETVAGSHPQGFEALVEEVRGDAWRAKGDRD 177
Query: 180 KAKTIFEE 187
+A+ ++
Sbjct: 178 QARAAYDR 185
>gi|225873528|ref|YP_002754987.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
51196]
gi|225794548|gb|ACO34638.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 42.3 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 26/172 (15%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ F +A++ + +D+A + +E IL+Q N+ +I +
Sbjct: 125 HRFRREPAPHTPAAFLEAVQCEEAGNIDEAVALYEAILAQAPGHAPSAINL--GTIYYHR 182
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
D A ++ + P A D + LQ+++E
Sbjct: 183 KDYARAERLYR--GATEADPNY---------ALAFFDLG---NVLDELQRMTEAIEAYQA 228
Query: 163 FANEI---------LGISALKFGKVQKA-KTIFEELAKDNNSPFGISTRSQM 204
+ L ++ + G+ ++A + + D + P+ R Q+
Sbjct: 229 AIRLVPRYADAHYNLALAYERQGERRQALRHWTAYIKLDPHGPWHNHARLQI 280
>gi|70732276|ref|YP_262032.1| hypothetical protein PFL_4952 [Pseudomonas fluorescens Pf-5]
gi|68346575|gb|AAY94181.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 213
Score = 42.3 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 70/192 (36%), Gaps = 10/192 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M S D + K + + L+ +++ + + + + Q
Sbjct: 1 MSSTEDEQLAELKDWWQRNGKPLVTGGLLALVI--VFGWQAWHKYQNNQSQGASVLYQQL 58
Query: 61 LE--LFNSNKLDDAR-SSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLKV 115
LE L K D AR + L+ + Y N+++A + V G +AA V
Sbjct: 59 LETTLTPDGKPDAARVTDLAGKLNSEFGGTAYAQYGNLFVAKVAVDTGKLDDAAAQLKAV 118
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
A D A + A + A +L + +E K+L + E+ G ++
Sbjct: 119 A-DKPANPTLGEVARQRLAQVLAAQNKADEALKLLDGDA--DKAFLATREELKGDLLVQL 175
Query: 176 GKVQKAKTIFEE 187
G+V +A +++
Sbjct: 176 GRVDEAHAAYQK 187
>gi|237756064|ref|ZP_04584643.1| hypothetical protein SULYE_0692 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691781|gb|EEP60810.1| hypothetical protein SULYE_0692 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 210
Score = 42.3 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 15/178 (8%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+K++ L+L+I+ ++ Y + + + + ++ +L + NKL+DAR E
Sbjct: 31 FKFVLAFLLLLIV-ISGGLYYKNQVDRQNREKASLHLSKIADLLSENKLEDARKELENFK 89
Query: 81 SQ--DNKLYNP-LSNMYIASILVAKGDTKNAAEIFLKVAND--DLAPLAVRYAATLQAAS 135
Q + LY L+ + + K + + A ++ ++ D + A
Sbjct: 90 KQYGNTDLYKVALAYEILINKEENKENKEPAEKLKNELKTDLSSGVNEYL--------AY 141
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
+ + +E +IL+ + A + + K G Q+A+ IFE + + N
Sbjct: 142 LKNKEGNSKEAKEILKSIDSKKYNY-ISAQTLYALILRKEGNFQEAQKIFETIKNNQN 198
>gi|308050455|ref|YP_003914021.1| hypothetical protein Fbal_2745 [Ferrimonas balearica DSM 9799]
gi|307632645|gb|ADN76947.1| Protein of unknown function DUF2133 [Ferrimonas balearica DSM 9799]
Length = 204
Score = 42.3 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 64/190 (33%), Gaps = 7/190 (3%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEK---KKNIVGENFAQALELF 64
++ + + + K +K +I + + ++ + K + + +E
Sbjct: 5 STEEQQVEAIKRFWKEYGVSIIGGAVLGLGGLFGWNTYQDHLVGKAEQASAAYGRVIEQA 64
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
++ + + Y PLS + +A V GD A + +V A
Sbjct: 65 GQSQDALDTAVAQFQNEYGESGYGPLSQLLLARAAVEAGDLAKAETLLTEVL--PSMDSA 122
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
TL+ A + + + L+K++ E+ G +K G++ A+
Sbjct: 123 TAPMVTLRLARVQLAQDKLDAAQATLEKVTSE--AFAAQREELKGDVLVKKGEMDAARAA 180
Query: 185 FEELAKDNNS 194
++ +
Sbjct: 181 YQSALDAGGA 190
>gi|171321333|ref|ZP_02910292.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
gi|171093390|gb|EDT38578.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
Length = 209
Score = 42.3 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 72/199 (36%), Gaps = 7/199 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + + Y ++ + A+ + A+ L+ A D
Sbjct: 63 AAANDKATMARAAADMEDKFGSTPYAQMTAL-AAAKTLYAAGDAAGAKAQLQWAADHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 EEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGLVADRRGDLLAAQGKTDDAR 179
Query: 183 TIFEELAKDNNSPFGISTR 201
+ +LA D S S R
Sbjct: 180 AAY-KLALDGLSKDDQSAR 197
>gi|296113388|ref|YP_003627326.1| uncharacterized protein family (UPF0070) family protein [Moraxella
catarrhalis RH4]
gi|295921082|gb|ADG61433.1| uncharacterized protein family (UPF0070) family protein [Moraxella
catarrhalis RH4]
Length = 277
Score = 41.9 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 22/178 (12%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQA---------------LELFNSNKLDDA 72
+L++L++ + + ++ K + + + L+ L +
Sbjct: 30 AVLLVLAVFFGWQYYQKNYAKIDTVAADAYTSISVRDERLVQAYLNPQLDEVAKQALAEE 89
Query: 73 RSSF-----EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
+ + N +Y + M A D A + + +L +
Sbjct: 90 EKQLFGDIDALVAAHGNTVYAWQALMIKARHQTNNNDLDGAVATLSQATSINLDDDGLTA 149
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
A ++ A ++ I + + P+ E+LG ++ AK+ +
Sbjct: 150 IAKIRHARAMLANGDTNGALSIANE-AMPT-AFEASRQELLGDIYHAKNEIDNAKSAY 205
>gi|253702419|ref|YP_003023608.1| hypothetical protein GM21_3833 [Geobacter sp. M21]
gi|251777269|gb|ACT19850.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 760
Score = 41.9 bits (97), Expect = 0.055, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 8/144 (5%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ + E FA AL+L S +A + + + + + + ++L G +
Sbjct: 4 SSRADSPAETFAAALDLQKSGHRGEAERLYRALAASG-GELAADACINLGALLDESGRAE 62
Query: 107 NAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A E + +A + PLA+ A S L + E + L + + P A
Sbjct: 63 EALEKYREALALREGDPLALNN-----AGSTLFKLGRFTE-AAQLFRHALERAPDSLEAQ 116
Query: 166 EILGISALKFGKVQKAKTIFEELA 189
LG + + G + A +F +L
Sbjct: 117 VALGAALQRDGDLPAALAVFRDLV 140
>gi|313675127|ref|YP_004053123.1| hypothetical protein [Marivirga tractuosa DSM 4126]
gi|312941825|gb|ADR21015.1| Tetratricopeptide TPR_3 repeat-containing protein [Marivirga
tractuosa DSM 4126]
Length = 1375
Score = 41.9 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 25/172 (14%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+LA++ Y ++ ++ F +AL L N N + A S + S
Sbjct: 178 ALAVYDYA-SLRYQSQEEDALAYFQEALPLLN-NHISQAGSQYLN------------SLY 223
Query: 94 YIASILVAKGDTKNAAEIFLKV----ANDDLAPLAVRYAATLQAASILVDTSS------- 142
Y+AS+L KG+ AA+ + KV +++L + + Q A I + S
Sbjct: 224 YVASLLQEKGEADKAAKFYDKVIGITQDNNLQNSDLWKISAYQRALIYQENSQNDNAISF 283
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
YE + L+ + M+ LG+ K G+ K +++ D S
Sbjct: 284 YEILKTQLENDEDTDREMYASTRNNLGVLYQKTGQTNKGESLLALSGDDLQS 335
>gi|255072115|ref|XP_002499732.1| predicted protein [Micromonas sp. RCC299]
gi|226514994|gb|ACO60990.1| predicted protein [Micromonas sp. RCC299]
Length = 604
Score = 41.9 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Query: 92 NMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY--AATLQAASILVDTSSYEEISKI 149
A L G + A + A+ A R A QAA ++ +
Sbjct: 469 RFERAQALKQLGRWEEAIGDYDAAADAFTANRQKREAKIAEAQAAFAKFESGDVPSATAR 528
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
L+ L+ L + + G KA
Sbjct: 529 LETLAR--QLYSSDVRAALAATYWRAGDAAKA 558
>gi|66044498|ref|YP_234339.1| hypothetical protein Psyr_1250 [Pseudomonas syringae pv. syringae
B728a]
gi|71737138|ref|YP_273580.1| hypothetical protein PSPPH_1322 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257487196|ref|ZP_05641237.1| hypothetical protein PsyrptA_28231 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289626151|ref|ZP_06459105.1| hypothetical protein PsyrpaN_13628 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649057|ref|ZP_06480400.1| hypothetical protein Psyrpa2_15127 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298486025|ref|ZP_07004099.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|302185743|ref|ZP_07262416.1| hypothetical protein Psyrps6_05338 [Pseudomonas syringae pv.
syringae 642]
gi|63255205|gb|AAY36301.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
gi|71557691|gb|AAZ36902.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298159502|gb|EFI00549.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320322919|gb|EFW79009.1| hypothetical protein PsgB076_19710 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329958|gb|EFW85946.1| hypothetical protein PsgRace4_11956 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330869575|gb|EGH04284.1| hypothetical protein PSYAE_20478 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330874710|gb|EGH08859.1| hypothetical protein Pgy4_06724 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330950785|gb|EGH51045.1| hypothetical protein PSYCIT7_05133 [Pseudomonas syringae Cit 7]
gi|330969068|gb|EGH69134.1| hypothetical protein PSYAR_01052 [Pseudomonas syringae pv. aceris
str. M302273PT]
gi|330985016|gb|EGH83119.1| hypothetical protein PLA107_08326 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009188|gb|EGH89244.1| hypothetical protein PSYTB_05737 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 213
Score = 41.9 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQFWHRYQASQSQGASMLYQQLLETALTPSGQADTARVAEISGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +AA VA D A + A + A +L +
Sbjct: 87 GTTYAQFGSLFVAKVAVDAGKLDDAAAELKTVA-DKPANDTLGEIARQRLARVLAAQNKT 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G ++ G+ +A +++
Sbjct: 146 DDALKLLDGDA--DKAFLASREELKGDLLVQLGRTDEAYAAYQK 187
>gi|241206783|ref|YP_002977879.1| thioredoxin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860673|gb|ACS58340.1| thioredoxin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 324
Score = 41.9 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ + A+A EL + +D+A + ++ D + L+ M I +
Sbjct: 148 EAAEIEAVVAEAAELLATGNIDEAAQLYGAVMQADPENAKALAGMAECMIAANQHHRARE 207
Query: 109 A--EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
E+ ++A D + ++ A L + + L +NP A
Sbjct: 208 ILTELPEELAKDAGIQAVLMKLEQIEEARKL---GDPVALERELA-----ANPDDHEARI 259
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
L G+ +A + + + + R Q++
Sbjct: 260 KLAKIRNVEGRRDEAADHLLLIMRKDRAFDDDGARRQLLQ 299
>gi|329120686|ref|ZP_08249348.1| hypothetical protein HMPREF9123_2779 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327460483|gb|EGF06819.1| hypothetical protein HMPREF9123_2779 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 471
Score = 41.9 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 13/125 (10%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L+ E++++ V E++A++ L + A IL+Q+ + +A L
Sbjct: 92 LYRRLDEERRDAVLEDYAESFLLREDGQYARAEEKLRGILAQNPGYAPV--RLQLALTLS 149
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
G T+ AA +V P AA + S+ + K + +N
Sbjct: 150 QSGQTREAAAEVAEVKETSELPPDA-------AAFLN----SFSDYLKRDRAWQFDANAY 198
Query: 161 HQFAN 165
+
Sbjct: 199 YLADR 203
>gi|257464647|ref|ZP_05629018.1| hypothetical protein AM202_05319 [Actinobacillus minor 202]
gi|257450307|gb|EEV24350.1| hypothetical protein AM202_05319 [Actinobacillus minor 202]
Length = 351
Score = 41.9 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E F+ A +L + KLD+A ++ I +D+ + + + + + +G A +
Sbjct: 7 ELFSTATQLVQAGKLDEAIDIYQSIQKEDSAEWFANAQVNLGVLFYKQGKVSEAIGAWQL 66
Query: 115 VANDDL 120
+ +D
Sbjct: 67 IQKEDS 72
>gi|167392256|ref|XP_001733493.1| tetratricopeptide repeat protein, tpr [Entamoeba dispar SAW760]
gi|165895951|gb|EDR23526.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba dispar
SAW760]
Length = 454
Score = 41.9 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 12/128 (9%)
Query: 64 FNSNKLDDARSSFEKILSQDN---KLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDD 119
N+ KL +A + F+++L Y + S GD + A F V D+
Sbjct: 244 VNTGKLKEAITHFDQLLRNHPNLLAGY-----LGRGSAKAMLGDLQKALTDFNLAVKKDN 298
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM--HQFANEILGISALKFGK 177
A + ++ A ++ E+ +K ++ E + A LGI
Sbjct: 299 KCGDAYKRRGQVKLALGQTQSA-LEDFNKAIELTPEEGDCYRQRGSAYHALGIFDKAAED 357
Query: 178 VQKAKTIF 185
++K+ +
Sbjct: 358 IKKSIKLI 365
>gi|222056474|ref|YP_002538836.1| Lytic transglycosylase catalytic [Geobacter sp. FRC-32]
gi|221565763|gb|ACM21735.1| Lytic transglycosylase catalytic [Geobacter sp. FRC-32]
Length = 717
Score = 41.9 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 12/152 (7%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLS---NMYIASILVAKGDTKNAAEIF 112
F +A LF S DA F + ++ L+ ++A L G A +
Sbjct: 265 QFKKAQALFKSRHYKDAEQLFTALGKVNSG--KVLNGEIRFWLARTLAKNGKEDEAVSAY 322
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK--LSEPSNPMHQFANEILGI 170
L + D A+ A L+AA I +E ++LQ+ P + + + +
Sbjct: 323 L-LLADTWPKAALADDALLEAAQIRKSQKKTDEAQQLLQRSLFLYPESGLKKSLLWEIAW 381
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
+ + A F +LA N+ R+
Sbjct: 382 ERYQAKDYKAASDWFGKLAGYENA----RDRA 409
>gi|284041501|ref|YP_003391841.1| glycosyl transferase family 2 [Conexibacter woesei DSM 14684]
gi|283945722|gb|ADB48466.1| glycosyl transferase family 2 [Conexibacter woesei DSM 14684]
Length = 797
Score = 41.9 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 17/162 (10%)
Query: 57 FAQALELFNSNKLDDARSSFEKILS--QDNKLYNPLSNMY-------IASILVAKGDTKN 107
F QA + DDA + FE+ ++ Y M +A I GD
Sbjct: 442 FEQAAAAQALGRTDDAIAYFERCIAMGDAPSRYTATVGMGTYLPTIALAEIRHQHGDPAA 501
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
A E+ A AA++L D + + + +++L P +
Sbjct: 502 AVELLDGALA---AHPGFFGLVLPFAAALLDDGAEPDVVVARVEELVAKLTP---TVRFM 555
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
LG + + G+ + A+ + EL P R + A +
Sbjct: 556 LGTALYEHGETEAAEQQYRELL--AQQPSSGHARVALAEALL 595
>gi|254785745|ref|YP_003073174.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
turnerae T7901]
gi|237684440|gb|ACR11704.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 933
Score = 41.9 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 59 QALELFNSNKLDDARSSF-EKILSQDNKLYN--------PLSNMYIASILVAKGDTKNAA 109
+A N+N+ +A ++F + + + LS A GDT A
Sbjct: 548 RARSYLNTNQFSEAEAAFTDTLALEGITSSQRAKLESSIALSIYRQAENARDTGDTALAQ 607
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI-- 167
+F +V+ D + + A AAS+ + S++ L+KL + + P ++A E
Sbjct: 608 NLFNRVS-DTIPGSELAPTALYDAASLALKDKSWQAAIFFLEKL-QSNYPRQKYAKETSR 665
Query: 168 -LGISALKFGKVQKAKTIFEELAKDNNS 194
L ++ L + KA + FE LA +++
Sbjct: 666 QLSVAYLNAKQTDKAASQFEALANSDDT 693
>gi|326570124|gb|EGE20169.1| hypothetical protein E9U_04475 [Moraxella catarrhalis BC8]
Length = 277
Score = 41.9 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 22/178 (12%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQA---------------LELFNSNKLDDA 72
+L++L++ + + ++ K + + + L+ L +
Sbjct: 30 AVLLVLAVFFGWQYYQKNYAKIDTVAADAYTSISVRDERLVQAYLNPQLDEVAKQALAEE 89
Query: 73 RSSF-----EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
+ + N +Y + M A D A + + +L +
Sbjct: 90 EKQLFGDIDALVAAHGNTVYAWQALMIKARHQTNNNDLDGAVTTLGQATSINLDDDGLTA 149
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
A ++ A ++ I + + P+ E+LG ++ AK+ +
Sbjct: 150 IAKIRHARAMLANGDTNGALSIANE-AMPT-AFEASRQELLGDIYHAKNEIDNAKSAY 205
>gi|126667425|ref|ZP_01738397.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17]
gi|126628181|gb|EAZ98806.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17]
Length = 809
Score = 41.9 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A+ A + EK+ + + + +++ +A++ + ++ A E L A
Sbjct: 489 LLAAIADGRMGNSGPAITRLEKLTTDNPNMQP--AHLALANLYASTDNSDKAVEQLLAAA 546
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
P + QA + S EE+ + L ++E P+ A+ + + ++ G
Sbjct: 547 VIT--PEVIGPLQ--QAGQLYASNHSVEEVQQWLGTVAETHPPLAPNASLLSALIHIQQG 602
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
V++A+T+ E +A ++N P G Q++ A
Sbjct: 603 DVEQARTLLEPMANEDN-PIGYRAYGQLLAA 632
>gi|326559871|gb|EGE10271.1| hypothetical protein E9G_07545 [Moraxella catarrhalis 7169]
gi|326560780|gb|EGE11147.1| hypothetical protein E9K_09114 [Moraxella catarrhalis 103P14B1]
gi|326569643|gb|EGE19695.1| hypothetical protein E9Q_01818 [Moraxella catarrhalis BC1]
gi|326570862|gb|EGE20886.1| hypothetical protein E9S_03977 [Moraxella catarrhalis BC7]
gi|326574412|gb|EGE24354.1| hypothetical protein E9Y_05582 [Moraxella catarrhalis 101P30B1]
gi|326576407|gb|EGE26316.1| hypothetical protein EA1_05607 [Moraxella catarrhalis O35E]
Length = 277
Score = 41.9 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 22/178 (12%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQA---------------LELFNSNKLDDA 72
+L++L++ + + ++ K + + + L+ L +
Sbjct: 30 AVLLVLAVFFGWQYYQKNYAKIDTVAADTYTSISVRDERLVQAYLNPQLDEVAKQALAEE 89
Query: 73 RSSF-----EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
+ + N +Y + M A D A + + +L +
Sbjct: 90 EKQLFGDIDALVAAHGNTVYAWQALMIKARHQTNNNDLDGAVATLSQATSINLDDDGLTA 149
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
A ++ A ++ I + + P+ E+LG ++ AK+ +
Sbjct: 150 IAKIRHARAMLANGDTNGALSIANE-AMPT-AFEASRQELLGDIYHAKNEIDNAKSAY 205
>gi|262091743|gb|ACY25332.1| tetratricopeptide repeat protein [uncultured actinobacterium]
Length = 225
Score = 41.9 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 12/150 (8%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNK---LYNPLSNMYIASILVAKGDTKNAAEIFLK 114
L L+ + DA EK + + L++ Y A + K D E++ +
Sbjct: 75 IAGLSLYRLGQWRDAADHLEKARAAMPASTLNHPVLADCYRALMRYEKVD-----ELWKE 129
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH-QFANEILGISAL 173
+ + P V + AAS D + +I+Q+ + + E ++ L
Sbjct: 130 LKDASPDPAIVAE-GRIVAASAQADKGDIQNAVRIMQQTKKDPAKVREHHLREWYVLADL 188
Query: 174 --KFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ G V A+ F+++A ++ I R
Sbjct: 189 YDRSGDVINAREWFKKIAHNDPDFSDIRDR 218
>gi|261252180|ref|ZP_05944753.1| membrane protein [Vibrio orientalis CIP 102891]
gi|260935571|gb|EEX91560.1| membrane protein [Vibrio orientalis CIP 102891]
Length = 204
Score = 41.9 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 6/197 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D S + E++ +A+++
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVILGAVVGLGGLFGWRYYQD-SVTAAQEAASESYTKAVQV 63
Query: 64 FNSNKLDDARSSFEKILSQD-NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
K A + + + + Y L+ + +A + V G+ A + A
Sbjct: 64 LAE-KGASAEGDIQTFIDGNKDTEYATLAALQLAKVQVEAGNFDEALAQL-EWAKSATKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
AV + A + + ++ L +++ S E+ G L+ G Q A
Sbjct: 122 AAVLSVVNYRLARVKAEQGEFDAAVAELANITDESWAGRVA--ELKGDILLRKGDEQAAY 179
Query: 183 TIFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 180 AAYTEAQQSGDASQTLQ 196
>gi|226328003|ref|ZP_03803521.1| hypothetical protein PROPEN_01894 [Proteus penneri ATCC 35198]
gi|225203707|gb|EEG86061.1| hypothetical protein PROPEN_01894 [Proteus penneri ATCC 35198]
Length = 206
Score = 41.9 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 48/145 (33%), Gaps = 5/145 (3%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
ME + N K Y L ++ + + + FA
Sbjct: 1 MEVYSTENEQVDAIKQFFKNYGLTIVLAAVIGFGGVFGWKYWQSHQTNRLQESAGAFATI 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE----IFLKVA 116
E + + + EK +++ N +Y L+++ +A I + D + KV
Sbjct: 61 SEAL-AKPTPENIALAEKFVTETNDIYGALASLELAQIAIDANDLVSGERHLTNAVAKVK 119
Query: 117 NDDLAPLAVRYAATLQAASILVDTS 141
ND A + A +Q A D +
Sbjct: 120 NDAFADMLNLRLARVQLALDKTDAA 144
>gi|294789789|ref|ZP_06755019.1| putative tetratricopeptide repeat protein [Simonsiella muelleri
ATCC 29453]
gi|294482295|gb|EFG29992.1| putative tetratricopeptide repeat protein [Simonsiella muelleri
ATCC 29453]
Length = 474
Score = 41.9 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L+D E +++ +A A+ + A +L Q+ + + +A +L
Sbjct: 94 LYDRLPENQRDKTLGEYAHAIVASADGQYAQAEQQLRALLVQNPEYAPV--RLQLARVLA 151
Query: 101 AKGDTKNAAEIFLKVANDDLAP 122
G ++AA+ + P
Sbjct: 152 KDGQLRDAAKEIDTLKQTPDMP 173
>gi|261820575|ref|YP_003258681.1| hypothetical protein Pecwa_1260 [Pectobacterium wasabiae WPP163]
gi|261604588|gb|ACX87074.1| Protein of unknown function DUF2133 [Pectobacterium wasabiae
WPP163]
Length = 206
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 4/149 (2%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + ++ Q E + K +A +S EK +++ Y L+++ +A
Sbjct: 39 WRFWQSHQNDSVQAASASYQQVTEQLAAGK-AEAIASTEKFTAENKNTYGALASLELARH 97
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V + D AA+ +A + L+ A + + + ++ K L +
Sbjct: 98 YVDQKDFAKAAQQL-VLAQSQTKDADLLAVVNLRLARVQLQENKADDALKTLDAIKPEG- 155
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
A E+ G + G Q A+ + +
Sbjct: 156 -WASQAAEVRGDILVSKGDNQAARDAYNK 183
>gi|169634403|ref|YP_001708139.1| hypothetical protein ABSDF2999 [Acinetobacter baumannii SDF]
gi|169797241|ref|YP_001715034.1| hypothetical protein ABAYE3261 [Acinetobacter baumannii AYE]
gi|260556123|ref|ZP_05828342.1| UPF0070 protein [Acinetobacter baumannii ATCC 19606]
gi|332851254|ref|ZP_08433327.1| hypothetical protein HMPREF0021_00898 [Acinetobacter baumannii
6013150]
gi|332866123|ref|ZP_08436838.1| hypothetical protein HMPREF0020_00444 [Acinetobacter baumannii
6013113]
gi|332873248|ref|ZP_08441205.1| hypothetical protein HMPREF0022_00810 [Acinetobacter baumannii
6014059]
gi|169150168|emb|CAM88062.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|169153195|emb|CAP02285.1| conserved hypothetical protein [Acinetobacter baumannii]
gi|260410178|gb|EEX03477.1| UPF0070 protein [Acinetobacter baumannii ATCC 19606]
gi|332730134|gb|EGJ61461.1| hypothetical protein HMPREF0021_00898 [Acinetobacter baumannii
6013150]
gi|332734764|gb|EGJ65858.1| hypothetical protein HMPREF0020_00444 [Acinetobacter baumannii
6013113]
gi|332738760|gb|EGJ69630.1| hypothetical protein HMPREF0022_00810 [Acinetobacter baumannii
6014059]
Length = 248
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 69/192 (35%), Gaps = 8/192 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFD---GSHEKKKNIVGENF 57
M +++ K K I+ +LI +I + W Y + + + V +
Sbjct: 17 MSLSDEEQFDSLKSFAKKYGSAMISGILIALI-AFFGWEYWQKRNLATSQTETAKVQQLM 75
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKV 115
+A ++ N L +S +KI+ D + + +A + K D A + KV
Sbjct: 76 DEANATADNPNALASITASADKIVKDDIDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKV 135
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N + + L+ A + + Y+E K L +P E+ G +
Sbjct: 136 ENSKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGDVDP--AFKATVEELRGDIFVAK 193
Query: 176 GKVQKAKTIFEE 187
+ AK ++
Sbjct: 194 KDIDSAKKAYQA 205
>gi|149176866|ref|ZP_01855476.1| BatB [Planctomyces maris DSM 8797]
gi|148844303|gb|EDL58656.1| BatB [Planctomyces maris DSM 8797]
Length = 798
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+ +A LLIL+ LS++ + K + E A + K +A
Sbjct: 354 EKASVPRSAVAALLILVTLSMSTKSLSAAETDAPAKQVSAEQINLANQFVREGKYAEALE 413
Query: 75 SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
++++ + N A + +GD + AAE+F VA D +A R
Sbjct: 414 RYQQVKPTPDDQAEL--NYNEAVTMYRQGDKQQAAEMFTSVAGDGETSIAAR 463
>gi|254506813|ref|ZP_05118953.1| Tetratricopeptide repeat family protein [Vibrio parahaemolyticus
16]
gi|219550394|gb|EED27379.1| Tetratricopeptide repeat family protein [Vibrio parahaemolyticus
16]
Length = 204
Score = 41.5 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+++ + K K + +L + L W Y D S + E++ QA++
Sbjct: 5 DSEEQQVEAIKDWWKENGKAVIFGAVLGLGGLFGWRYYQD-SVTAAQEAASESYTQAVQE 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+N + I + Y L+ + +A + V + A + A
Sbjct: 64 LAANGAAGEAAVQSFIDANKETQYAVLAALQLAKVQVEANNLDEALAQL-EWAKTATKDE 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
AV + A + + +++ L +++ S E G L+ G Q A
Sbjct: 123 AVLSVINYRLARLKAEQGNFDAALSELAAITDESWAGRVA--EQKGDILLRKGDEQAAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 181 AYTEAQQSGDASQTLQ 196
>gi|238027073|ref|YP_002911304.1| hypothetical protein bglu_1g14520 [Burkholderia glumae BGR1]
gi|237876267|gb|ACR28600.1| Hypothetical protein bglu_1g14520 [Burkholderia glumae BGR1]
Length = 209
Score = 41.5 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 12/188 (6%)
Query: 4 NNDANSYKGKCKMGKC--CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG--ENFAQ 59
+ + K + WI ++++ + W Y + G E Q
Sbjct: 5 DEQESIESVKAWWARWGDLTTWILTAVLVVAAAWNGWNYW---QRHQAAQASGLYEAVQQ 61
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A+ + K+ A S E Y ++ + A L GDT A + L+ D
Sbjct: 62 AVSSGDKAKIARAASDMED--KYGRTAYAQMTALAAAKALYMAGDTAGA-KAQLQWTIDH 118
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A + A L+ AS+L++ +Y+ +L P + + G GK
Sbjct: 119 AQDDAYKQIAKLRLASLLLEEKAYDAGLALLSG--TPDDGFKGLVADRRGDLLAAQGKRG 176
Query: 180 KAKTIFEE 187
A+ ++
Sbjct: 177 DARAAYQL 184
>gi|297569750|ref|YP_003691094.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925665|gb|ADH86475.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
Length = 787
Score = 41.5 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 9/163 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV- 115
A + + + D+A + + +L++ +L + M +A +L KGD A + ++
Sbjct: 602 LLIARLMTETGRTDEAIAEYRALLAKRPELTP--ARMNLAVLLQQKGDDAGAMAAYREIL 659
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
A A A L A D + + L L++ P + + LG+
Sbjct: 660 ARAPNFAPAANNLAWLLAHEPKPDLGA----ALRLAMLAKEQAPTDPYVADTLGLIHYLR 715
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
G A + A P + + A A +++ +
Sbjct: 716 GSHDLAIRQLSQAA--AALPDNPTIGYHLARALRAAGNKKEAE 756
>gi|260549071|ref|ZP_05823292.1| UPF0070 protein [Acinetobacter sp. RUH2624]
gi|260407799|gb|EEX01271.1| UPF0070 protein [Acinetobacter sp. RUH2624]
Length = 248
Score = 41.5 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 8/192 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFD---GSHEKKKNIVGENF 57
M +++ K K I+ +LI +I + W Y + + + V +
Sbjct: 17 MSLSDEEQFDSLKSFAKKYGSAMISGILIALI-AFFGWEYWQKRNLATSQTETAKVQQLM 75
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKV 115
+A ++ N L +S +K++ D + + +A + K D A + KV
Sbjct: 76 DEANATADNPNALASITASADKLVKDDIDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKV 135
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N + + L+ A + + Y+E K L +P E+ G +
Sbjct: 136 ENSKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGNVDP--AFKATVEELRGDIFVAK 193
Query: 176 GKVQKAKTIFEE 187
+ AK ++
Sbjct: 194 KDIDSAKKAYQA 205
>gi|120610113|ref|YP_969791.1| hypothetical protein Aave_1426 [Acidovorax citrulli AAC00-1]
gi|120588577|gb|ABM32017.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1]
Length = 221
Score = 41.5 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 46/133 (34%)
Query: 20 CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI 79
+ + ++++I + + ++ A +F+ +
Sbjct: 22 AWGTLISGVLVVIFGGVAAWNGYHYWQNQQAGQAAALSDAVQVAVQGGDAARATQAFDDL 81
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
S+ +A+ + + A+ L+ D+ + + A+L+ +S+L+D
Sbjct: 82 KSRYGGTVQAAQAGLLAAKAMVDSGNPDGAKPILQWLADNASDDGYKAIASLRLSSLLID 141
Query: 140 TSSYEEISKILQK 152
+Y+E L
Sbjct: 142 QKAYDEALSRLSG 154
>gi|91788727|ref|YP_549679.1| hypothetical protein Bpro_2866 [Polaromonas sp. JS666]
gi|91697952|gb|ABE44781.1| Tetratricopeptide TPR_2 [Polaromonas sp. JS666]
Length = 215
Score = 41.5 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 11/138 (7%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+++A L + + +A + ++ ++ + +P + I G T +A
Sbjct: 35 SAAHADDYADVSRLMRAGQYPEALAKADQYIASKPR--DPQMRFFKGVIQTETGKTSDAI 92
Query: 110 EIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
F K+ + P A + A D + L+ ++ +NP + A+E L
Sbjct: 93 ATFTKITEEYPELPEPYNNLAVIYAGQNQFDKA-----RAALE-MAIRTNPSYATAHENL 146
Query: 169 G--ISALKFGKVQKAKTI 184
G + L KA +
Sbjct: 147 GDVYAKLASQAYDKALQL 164
>gi|150398038|ref|YP_001328505.1| tetratricopeptide TPR_4 [Sinorhizobium medicae WSM419]
gi|150029553|gb|ABR61670.1| Tetratricopeptide TPR_4 [Sinorhizobium medicae WSM419]
Length = 420
Score = 41.5 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 13/145 (8%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G +A+ L D A + + +++ + + +A +L G+ A +
Sbjct: 190 GLVLERAVALHAFGDFDGAEAGYRQLIRTVPG--HVEARFRLAHLLNDVGEYDEAEHFYR 247
Query: 114 KVANDDLAPLAVRYAATLQAAS-ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
+ P V L + Y + SK Q+L +P L ++
Sbjct: 248 TLLPTVPNPDDV-----LHWIGDTQMAQGFYRKASKTFQELLV-RHPQRGAVRYKLAVAH 301
Query: 173 LKFGKVQKAKTIF----EELAKDNN 193
L G+ A F + L+ D N
Sbjct: 302 LASGRRDAAVAAFESFDDVLSDDTN 326
>gi|315224829|ref|ZP_07866650.1| TPR-domain containing protein [Capnocytophaga ochracea F0287]
gi|314945232|gb|EFS97260.1| TPR-domain containing protein [Capnocytophaga ochracea F0287]
Length = 1001
Score = 41.5 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 53/175 (30%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY-NPLSNMY 94
A W + G + A + N +A S FEK L + + Y
Sbjct: 703 ASWAKGLGYVEVTDLELEGATYEAAERQYMQNNTKEAISGFEKYLKEFPNGMRRTNAEFY 762
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL- 153
+ + G A + V + + IL++ SY + L+ L
Sbjct: 763 LGQMYFNSGQKSKALTHYENVTKSGSNEYGEQSLTRV--CQILLEAGSYLKAKPYLEDLE 820
Query: 154 -SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ +A L KA ++ ++ + I + ++LA
Sbjct: 821 RTATIAQNKTYAQSNLMRVCYNEKLYDKAIEYANKVLEEKSIDTRIKNDAYIVLA 875
>gi|330895890|gb|EGH28175.1| hypothetical protein PSYJA_03859 [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 213
Score = 41.5 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQFWHRYQASQSQGASMLYQQLLETALTPSGQADTARVAEISGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +AA VA D A + A + A +L +
Sbjct: 87 GTTYAQFGSLFVAKVAVDAGKLDDAAAELKPVA-DKPANDTLGEIARQRLARVLAAQNKT 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G ++ G+ +A +++
Sbjct: 146 DDALKLLDGDA--DKAFLASREELKGDLLVQLGRTDEAYAAYQK 187
>gi|303236371|ref|ZP_07322961.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
gi|302483429|gb|EFL46434.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
Length = 224
Score = 41.5 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E + + K + K + ++ ++I+ I+ Y + E ++ A+A
Sbjct: 7 EGTYEESLNKSEAFFAKYGKTALIAIVAILIVVAGIFLY-KNYVSEPREAEASTELAKAQ 65
Query: 62 ELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTK 106
+LF + + D A F+K+ S + L+N+Y+A +
Sbjct: 66 QLFQTQQFDQALKGFQKVQSDYSSTDAGNLANLYVALCYAHQQKPD 111
>gi|269962409|ref|ZP_06176759.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832905|gb|EEZ87014.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 204
Score = 41.5 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 73/197 (37%), Gaps = 6/197 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D S + +++ +
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVIIGAVVGLGGLFGWRYYQD-SVIQASEAASQSYTTVMNA 63
Query: 64 FNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ K DA++ + + + K Y+ L+ + +A + V D A E K A +
Sbjct: 64 LQT-KGADAQADIQAFIDSNEVKEYSVLAALQLAKVQVDAKDLSAALEQL-KWAQSNTKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
A+ + + A I + +++ + L K++ E G AL+ G + A
Sbjct: 122 AALSPLISYRIARIEAEMGNFDAANAELDKVT--DAAWTGRIAEQRGDIALRQGDKEAAY 179
Query: 183 TIFEELAKDNNSPFGIS 199
+ E + ++ +
Sbjct: 180 AAYTEAQQAADASPTLQ 196
>gi|22001550|sp|Q9WX71|BCSC4_ACEXY RecName: Full=Cellulose synthase 2 operon protein C; Flags:
Precursor
gi|4827170|dbj|BAA77596.1| bcsCII [Gluconacetobacter xylinus]
Length = 1307
Score = 41.5 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 7/121 (5%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
++ N+ + D AR+ + + Y A++ +GDT +A ++ +V
Sbjct: 432 VQAINAGRYDAARADLATLGRR--PGYGLTVLSLQAALARRQGDTADAVRLYREVV--RR 487
Query: 121 APLAVRYAATLQAASILV-DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
AP +L A + V D + +I LQ+L+ P+ A +L A + G
Sbjct: 488 APRDAGALFSLGALDVQVGDATEAADILTRLQRLA-PAMARRLEAM-MLSAQADRAGDDD 545
Query: 180 K 180
Sbjct: 546 G 546
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 42/146 (28%), Gaps = 9/146 (6%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
G F+ +A ++ + L M +++ GD +
Sbjct: 492 AGALFSLGALDVQVGDATEAADILTRLQRLAPAMARRLEAMMLSAQADRAGDDDGRIALL 551
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
+ D VR L+ A L D + ++ L+ P N A +
Sbjct: 552 RRAQALDPDDPWVR----LKLAHALDDAGDHAAAQAMMDALTAPRNA---SAQALQAGII 604
Query: 173 LKFG--KVQKAKTIFEELAKDNNSPF 196
G A + E + + +P
Sbjct: 605 YAMGRHDTATAGALLERMPRTGRTPD 630
>gi|46136823|ref|XP_390103.1| hypothetical protein FG09927.1 [Gibberella zeae PH-1]
Length = 613
Score = 41.5 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 16/136 (11%)
Query: 58 AQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-V 115
QALE + ++AR +FEK + D Y L+ + G+ A + F K +
Sbjct: 293 LQALEKKTGDGYEEARQAFEKALELGDLGEYEALAYNMRGTFRTLLGNHAEATQDFDKSI 352
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYE----EISKILQKLSEPSNPMHQFANEILGIS 171
D + ++ ASI ++ E E +K L++ + + A +
Sbjct: 353 ELDPSMTQSY-----IKRASISLELGEPEKAEAEFAKALEQDKNDPDVYYHRAQ-----A 402
Query: 172 ALKFGKVQKAKTIFEE 187
G + A+ +++
Sbjct: 403 HFIKGDLADAQKDYQK 418
>gi|323491633|ref|ZP_08096812.1| hypothetical protein VIBR0546_18526 [Vibrio brasiliensis LMG 20546]
gi|323314209|gb|EGA67294.1| hypothetical protein VIBR0546_18526 [Vibrio brasiliensis LMG 20546]
Length = 204
Score = 41.5 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 4/196 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + + K K + ++ + L W Y D S + E++ +A++
Sbjct: 5 DTEEQQVEAIKDWWKENGKAVILGAVVGLGGLFGWRYYQD-SVTAAQEAASESYTKAVQT 63
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
I + Y L+ + +A + V G+ A + A
Sbjct: 64 LAEKGASAEGDIQAFIDANKETEYAVLAALQLAKVQVEAGNLDEALAQL-EWAKSTTKDA 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
AV + A + + ++ L ++ E+ G L+ G Q A
Sbjct: 123 AVSAVLNYRLARVKAEQGEFDAAVSELANIT--DQSWAGRVAELKGDILLRKGDAQGAYA 180
Query: 184 IFEELAKDNNSPFGIS 199
+ + + ++ +
Sbjct: 181 AYTQAQQSGDASQTLQ 196
>gi|158522421|ref|YP_001530291.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511247|gb|ABW68214.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 648
Score = 41.5 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 76 FEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135
++K+++ D + ++ +L +G A + + +
Sbjct: 512 YQKVMAVDPRNAE--AHYGTGQLLERQGKIDAAITAYETTLD---IDPLYTDVYQ-RLGK 565
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
I + + YE+ L + +P A E LG+S G ++ A +
Sbjct: 566 IHLTRNEYEKAIDRFFMLLK-IDPFRAEAFEQLGLSYYHTGDLENAIRAY 614
>gi|296387684|ref|ZP_06877159.1| hypothetical protein PaerPAb_05997 [Pseudomonas aeruginosa PAb1]
Length = 214
Score = 41.5 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L + ++ W + + + AL K+ S+
Sbjct: 28 GILALAVVFGWQAWQKYQTNQAQGASIVYQQLIETALNPAGQPDPAKVAELAGKLKSEFG 87
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +A V D A + A + A +L
Sbjct: 88 GTHYAQYGSLFVAKVAVDSGKLDDAVAELKAVM-DKPADATLGELARQRLARVLAAQGKV 146
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
EE K+L+ + E+ G ++ + +A+ +E+
Sbjct: 147 EEGLKLLEGDA--DKAYVSTREELKGDLLVQLKRTDEARAAYEK 188
>gi|85059736|ref|YP_455438.1| hypothetical protein SG1758 [Sodalis glossinidius str. 'morsitans']
gi|84780256|dbj|BAE75033.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 204
Score = 41.5 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 9/181 (4%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEK--KKNIVGENFAQALELFNSNKLDDARSSFEKI 79
K +A ++L + +L W Y + ++ + + L + DA F
Sbjct: 23 KALAIGVVLGVGALVGWRYWHNHHNDAMMAASSAWQPVNAGLSGQAAQPQLDAAQHF--- 79
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
++ Y L++M +A +GD A + K ++ L+ A + +
Sbjct: 80 ADANDNNYGALTSMGLARQFAERGDFPAAEKQLQKALGQTRE-ANLQSLINLRLARVQLQ 138
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ + K L A + G + + G Q A+T +E+ A + +P +
Sbjct: 139 QKNVDGALKTLDG--VKDQGWTALAEDTRGDAQVIKGDQQAARTAYEK-ALQSGAPQALV 195
Query: 200 T 200
Sbjct: 196 R 196
>gi|289677944|ref|ZP_06498834.1| hypothetical protein PsyrpsF_31953 [Pseudomonas syringae pv.
syringae FF5]
gi|330975907|gb|EGH75973.1| hypothetical protein PSYAP_04524 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 213
Score = 41.5 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQFWHRYQASQSQGASMLYQQLLETALTPSGQADTARVAEISGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +AA VA D A + A + A +L +
Sbjct: 87 GTTYAQFGSLFVAKVAVDAGKLDDAAAELKPVA-DKPANDTLGEIARQRLARVLAAQNKT 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G ++ G+ +A +++
Sbjct: 146 DDALKLLDGDA--DKAFLASREELKGDLLVQLGRTDEAYAAYQK 187
>gi|229496266|ref|ZP_04389986.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406]
gi|229316844|gb|EEN82757.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406]
Length = 1009
Score = 41.5 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 6/152 (3%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
D S + A L +N+ + +Q N + ++ +Y+AS +AK
Sbjct: 130 DESALSRAERTEWQVRTAYALLRTNRGGEQLGPLFAEAAQANNRWGRIAKLYVASSKMAK 189
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPM 160
GD + A I+ ++ D R + A++ + Y + + ++ EP
Sbjct: 190 GDLQAAEAIYRSLSGDRELAPETR----IGMAALSYYSGDYAKAVAEVGEIERVEPRLAS 245
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+ ++ G + + G A E +D+
Sbjct: 246 NPSLLQVAGNAYYRLGDAPNASKYLERFIEDS 277
>gi|156086610|ref|XP_001610714.1| variant erythrocyte surface antigen-1, alpha subunit [Babesia bovis
T2Bo]
gi|154797967|gb|EDO07146.1| variant erythrocyte surface antigen-1, alpha subunit [Babesia
bovis]
Length = 1231
Score = 41.1 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 16/164 (9%)
Query: 31 MILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNS--NKLDDARSSFEKILSQDNKLYN 88
+++ L +G +K V +A ++ KL+ A+ + EK+ +
Sbjct: 610 VVVQLGNAQEALEGKEKKAIQGVKRELEKAKGALDTAKGKLEKAKKALEKLTTNGGGG-- 667
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
IL D A+ D ++ ++ E I K
Sbjct: 668 --------GILKNVVDAIGKAQS-DVTNVDPGKNAISEGVHKIREVLKILKEEVPEAIDK 718
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+ ++ + + E+L + A +++
Sbjct: 719 AIDEMKQKGKDAYGTTRELL---DWASKQFIHAIEQIKDICNSA 759
>gi|110637942|ref|YP_678149.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110280623|gb|ABG58809.1| conserved hypothetical protein, with TPR repeat [Cytophaga
hutchinsonii ATCC 33406]
Length = 1012
Score = 41.1 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 13/135 (9%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ + D A + +K K Y PL + IA+I + KV D A
Sbjct: 187 NGEYDTAIADLQKAAES--KEYKPLVAVLIANIYYRQAKYDELIPYAEKVIADKSAGPNT 244
Query: 126 RYAATLQAASILVDTSSYEEISKILQKL------SEPSNPMHQFANEILGISALKFGKVQ 179
IL D +++ L + + + +G S+ K +
Sbjct: 245 NDVK-----LILADAYFFKQEYAKATPLFKDYLTATGTKSLTPDMKYRIGFSSYKAADYK 299
Query: 180 KAKTIFEELAKDNNS 194
+A + + +A D +S
Sbjct: 300 QAVDMLQAIATDKDS 314
>gi|326563521|gb|EGE13780.1| hypothetical protein E9O_08152 [Moraxella catarrhalis 12P80B1]
Length = 277
Score = 41.1 bits (95), Expect = 0.094, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 57/194 (29%), Gaps = 28/194 (14%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQA---------------LELFNSNKLDDA 72
+L++L++ + + ++ K + + + L+ L +
Sbjct: 30 AVLLVLAVFFGWQYYQKNYAKIDTVAADAYTSISVRDERLAQAYLNPQLDEVAKQALAEE 89
Query: 73 RSSF-----EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
+ + DN +Y + M A D A + + +L +
Sbjct: 90 EKQLFGDIDALVAANDNTVYAWQALMIKARHQTNNNDLDGAVATLSQATSINLDDDGLTA 149
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
A ++ A ++ I + E+LG ++ AK+ +
Sbjct: 150 IAKIRHARAMLANGDTNGALSIANEAMP--TAFEASRQELLGDIYHAKNEIDNAKSAY-- 205
Query: 188 LAKDNNSPFGISTR 201
N+ + R
Sbjct: 206 ----TNAWEALRER 215
>gi|187734973|ref|YP_001877085.1| TPR repeat-containing protein [Akkermansia muciniphila ATCC
BAA-835]
gi|187425025|gb|ACD04304.1| TPR repeat-containing protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 884
Score = 41.1 bits (95), Expect = 0.095, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 51/144 (35%), Gaps = 6/144 (4%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD----NKLYNPLSNMYIASIL 99
G E A L N +A + E++ ++D N+L + + +
Sbjct: 179 GQAESPAVSRPARLLLADVLVNQECYQNAAAILEQLKTEDGTDSNRLIRSYAELIEGKLA 238
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD--TSSYEEISKILQKLSEPS 157
+G+ A + F V ++ P +R L A +D S+ E+ + + L +
Sbjct: 239 GKQGNLDQAIKTFSAVMDNKSYPEKIRDLGRLALAKAEIDREKSNPEQAEEETRSLPQEE 298
Query: 158 NPMHQFANEILGISALKFGKVQKA 181
H + A GK + A
Sbjct: 299 EAPHTAGTAEERLLAFIGGKAESA 322
Score = 40.4 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 11/157 (7%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK-GDTKNAAEIFLKV 115
+ A+ LFN A I D L + + + L + D + E ++
Sbjct: 122 YWTAVGLFNKGSFTKALEKLTAIPETDPL---SLYGLQLKAQLARQLQDRQLLLETLSRL 178
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP-----MHQFANEILGI 170
+ P R A L A +LV+ Y+ + IL++L + +A I G
Sbjct: 179 GQAES-PAVSR-PARLLLADVLVNQECYQNAAAILEQLKTEDGTDSNRLIRSYAELIEGK 236
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
A K G + +A F + + + P I ++ LA
Sbjct: 237 LAGKQGNLDQAIKTFSAVMDNKSYPEKIRDLGRLALA 273
>gi|148264128|ref|YP_001230834.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146397628|gb|ABQ26261.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
Length = 757
Score = 41.1 bits (95), Expect = 0.095, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 16/157 (10%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A ++D A +E+I++ D K +A +LV G + A + +
Sbjct: 9 LESAQRFILKGQIDRAIKDYEQIVALDPKEIRH--RQRLAELLVRAGRKEEAIGEYDAIG 66
Query: 117 ---NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS-EPSNPMHQFANEILGIS- 171
D+ Y A + I L S + A G+S
Sbjct: 67 KYYADNG------YFLKAIAVYKQIQKLDSGNIKVTLTLASLNEKQGLIGNALAEYGLSV 120
Query: 172 --ALKFGKVQKAKTIF-EELAKDNNSPFGISTRSQMI 205
K G++ +A + + LA D ++P ++M+
Sbjct: 121 DYYEKNGQLSEALKVIEQMLAIDADNPATCQKYAEML 157
>gi|238896989|ref|YP_002921734.1| putative cellulose synthase [Klebsiella pneumoniae NTUH-K2044]
gi|238549316|dbj|BAH65667.1| putative cellulose synthase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 975
Score = 41.1 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 51/162 (31%), Gaps = 18/162 (11%)
Query: 63 LFNSNKLDDARSSFE--------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
L NK +A++ + K+ + + A V+ G+ A +
Sbjct: 54 LREQNKSAEAQAMLQTLPQSLRQKLQPRVVAGMPGDALRRQAQAQVSGGNPAGAIATLRE 113
Query: 115 VANDDLAPLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+R A +L + + E S ++ P A + A
Sbjct: 114 GVARYPDDPWLRLDLAR-----LLQKSGNGSEASSLMSAAYRPGAS--NSALYAAALFAS 166
Query: 174 KFGKVQKAKTIFEELAKDNNSP--FGISTRSQMILANIIASD 213
+ G Q+A+T+ + + + + R L + A +
Sbjct: 167 ENGAWQQAQTLLARIPGGSQTSDMRDLRQRVNYNLQLVTAEN 208
>gi|224025913|ref|ZP_03644279.1| hypothetical protein BACCOPRO_02659 [Bacteroides coprophilus DSM
18228]
gi|224019149|gb|EEF77147.1| hypothetical protein BACCOPRO_02659 [Bacteroides coprophilus DSM
18228]
Length = 487
Score = 41.1 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
D K + + +V A + AAS + + ++ K+L+K+ + + +
Sbjct: 385 DLKPGTKEYKEVYEIAARTYPEDAVACINAASANIVSGDFQNAEKLLEKVKDDNRAWNN- 443
Query: 164 ANEILGISALKFGKVQKAKTIFEE 187
LG+ A G Q A+ F +
Sbjct: 444 ----LGVLAWLRGDFQAARDWFNK 463
>gi|310658458|ref|YP_003936179.1| hypothetical protein CLOST_1154 [Clostridium sticklandii DSM 519]
gi|308825236|emb|CBH21274.1| protein of unknown function [Clostridium sticklandii]
Length = 371
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E + + EL S K D+A + E+I+ +D Y + Y+ I KG+ ++A + F
Sbjct: 225 EKISLSSELIESEKYDEALAILEEIVDEDTSSYE--AYFYLGYINRLKGEYESAIDYFEF 282
Query: 115 VAN-DDLAPLAVRYAA 129
D P + A
Sbjct: 283 AYKLDTSQPQLINEMA 298
>gi|187735095|ref|YP_001877207.1| serine/threonine protein kinase [Akkermansia muciniphila ATCC
BAA-835]
gi|187425147|gb|ACD04426.1| serine/threonine protein kinase [Akkermansia muciniphila ATCC
BAA-835]
Length = 860
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 5/132 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+ I I I++LA+ + + E+ + + A S
Sbjct: 336 RIIVASSIAFIVALALGVWGWTKWREEGAPAPATPPSPISPAAEA-----ALEDRGAAES 390
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
+ + A + +GD AA +F +A PL+ A L +
Sbjct: 391 RLERSIRFGKLFNEAQESLNRGDLVKAAAMFGDLAAQPDCPLSTSLWAGLNQVLCMWVRG 450
Query: 142 SYEEISKILQKL 153
+ E + L++L
Sbjct: 451 QFPEGVERLEEL 462
>gi|256420544|ref|YP_003121197.1| hypothetical protein Cpin_1499 [Chitinophaga pinensis DSM 2588]
gi|256035452|gb|ACU58996.1| hypothetical protein Cpin_1499 [Chitinophaga pinensis DSM 2588]
Length = 324
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 48/172 (27%), Gaps = 25/172 (14%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEK-KKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
I ++ +I + H+ + G A +
Sbjct: 164 IYVIITAIIGAGLAGLLFLSPWHKDIYRQFSGTEMVHANHMSTEQDTA------------ 211
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
M+ A+ G A + +V + ++ A LVD
Sbjct: 212 --------LLMHQAAAAFNHGHFNKAIGLLNQV----IVRDSLHTTARYYRGVSLVDEGK 259
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
E L+K+ ++ A + +S ++ Q+ ++ +++
Sbjct: 260 LGEARADLKKVYNSNSSYRYDAAFYMALSYIRENDKQQCLEWVLKIPENSTV 311
>gi|152985142|ref|YP_001346697.1| hypothetical protein PSPA7_1313 [Pseudomonas aeruginosa PA7]
gi|150960300|gb|ABR82325.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 214
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L + ++ W + + + AL K+ S+
Sbjct: 28 GILALAVVFGWQAWQKYQTNQAQGASIVYQQLIETALNPAGQPDTAKVAELAGKLKSEFG 87
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +A V D A + A + A +L
Sbjct: 88 GTHYAQYGSLFVAKVAVDSGKLDDAVAELKAVM-DKPADATLGELARQRLARVLAAQGKV 146
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
EE K+L+ + E+ G ++ + +A+ +E+
Sbjct: 147 EEGLKLLEGDA--DKAYVSTREELKGDLLVQLKRTDEARAAYEK 188
>gi|302038477|ref|YP_003798799.1| hypothetical protein NIDE3180 [Candidatus Nitrospira defluvii]
gi|300606541|emb|CBK42874.1| protein of unknown function, TPR-like [Candidatus Nitrospira
defluvii]
Length = 584
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 54/131 (41%), Gaps = 6/131 (4%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L S ++++A + ++I + D + PL ++ +A L + + + + +
Sbjct: 128 LVRSGQVEEAVTELQRIAAIDPQN--PLIHLRLARELRKLDRLEESLKSYQQAVELGPDM 185
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
L R A +A ++D + + + + P +P+ A +L + G ++ +
Sbjct: 186 LNWR-LALARARFDILDYEGADREVQSVLQQVSPGSPLELSAKNLLTVFY---GSTERGR 241
Query: 183 TIFEELAKDNN 193
++ D N
Sbjct: 242 RFAPMMSPDAN 252
>gi|330936982|gb|EGH41080.1| hypothetical protein PSYPI_01050 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 213
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQFWHRYQASQSQGASMLYQQLLETALTPSGQADTARVAEISGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +AA VA D A + A + A +L +
Sbjct: 87 GTTYAQFGSLFVAKVAVDAGKLDDAAAELKPVA-DKPANDTLGEIARQRLARVLAAQNKT 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G ++ G+ +A +++
Sbjct: 146 DDALKLLDGDA--DKAFLASREELKGDLLVQLGRTDEAYVAYQK 187
>gi|77165454|ref|YP_343979.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
gi|76883768|gb|ABA58449.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
Length = 934
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
++ +N G +AQ L F + DA +SF+K LS++ + + Y +G
Sbjct: 265 SKRARNHPGVTYAQGLLHFQQQQYADALTSFQKTLSKNPEYMP--AVFYAGIAYYQQGQL 322
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A ++ + A A I + +Y IL+ + NP A
Sbjct: 323 TQAGQLLNQFLKR----FPHSDTAAKTLAMIRLREGNYTSAQAILEPIIA-QNPNDTAAL 377
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
++LG + L GK +K+ F+++ +P
Sbjct: 378 DLLGSAILGQGKPEKSAAYFQKVT--AQTPES 407
>gi|83311391|ref|YP_421655.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
gi|82946232|dbj|BAE51096.1| Predicted Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
Length = 442
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
AQAL L + LD+A ++ K + + + A +L+ + A +F +V
Sbjct: 22 ALAQALRLADGQLLDEAIAALAK--ADGHPE----CDYRRAGLLLMRQRPTEAEALFRRV 75
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ--KLSEPSNPMHQFANEILGISAL 173
P + L A LV+ E +L+ L +P + + +LGI+
Sbjct: 76 L--SAVPGHLDTMVGL--AGALVEQGRPAESLPLLEAAALVQPQSGRIHY---LLGIALD 128
Query: 174 KFGKVQKA 181
+ G+ +A
Sbjct: 129 EAGRGAEA 136
>gi|78186368|ref|YP_374411.1| TPR repeat-containing protein [Chlorobium luteolum DSM 273]
gi|78166270|gb|ABB23368.1| TPR repeat [Chlorobium luteolum DSM 273]
Length = 230
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 14/204 (6%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE-----K 78
IA LIL+++ A F+ + ++N A A F+ A E K
Sbjct: 32 IAGALILILIGGAAIFFWTE-RQASRENEAAPMMAAAAMAFDRGDFQRAIDGTEKEPGLK 90
Query: 79 ILSQDNKLYNP--LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASI 136
+++ ++ + +A+ A G K+A + F + AA AS
Sbjct: 91 TIAEQYNGTPSGEMAELLLANAYYAIGKPKDALKAFDAA---SPVSPDLAAAAIAGKASC 147
Query: 137 LVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK--FGKVQKAKTIFEELAKDNNS 194
D Y+ +K SE + A ++ + + G +KA +F ++
Sbjct: 148 QSDLQQYDAAAKSFLSASEKAENNALKAQYLMAAADCRLGAGDTEKAGELFGQVVDRYPG 207
Query: 195 PFGISTRSQMILANIIASDQRNKK 218
G +Q L I + + K
Sbjct: 208 SSGARA-AQQALWKISGMQEVSNK 230
>gi|255073749|ref|XP_002500549.1| predicted protein [Micromonas sp. RCC299]
gi|226515812|gb|ACO61807.1| predicted protein [Micromonas sp. RCC299]
Length = 661
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 52/153 (33%), Gaps = 8/153 (5%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G L K D+ E L+ LS + + G+ + AAE++
Sbjct: 11 GRATETIYGLIRDGKHDECAKLLEIQLANAPDSRPALSLLGYCYYYL--GNFERAAEMYG 68
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
++A + A L S Y++ + + + + Q +++ + A
Sbjct: 69 QLAKLFPENEDY----AVHHAQSLYKASMYQDALRASRAIDSKDPAVRQKVSQLQALIAY 124
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ + + +E D+ P + + +L
Sbjct: 125 EEDDLAGCRARLDECPSDD--PDVVVNLACCML 155
>gi|325124480|gb|ADY84003.1| hypothetical protein BDGL_003417 [Acinetobacter calcoaceticus
PHEA-2]
Length = 232
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 8/192 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFD---GSHEKKKNIVGENF 57
M +++ K K I+ +LI +I + W Y S + + V +
Sbjct: 1 MSVSDEEQFDSLKSFAKKYGSAMISGILIALI-AFFGWEYWQKRNLASSQTETAKVQQLM 59
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKV 115
+A ++ N L +S +KI+ D + + +A + K D A + KV
Sbjct: 60 DEANASADNPNALTSVTASADKIVKDDINSVQAIQTQFVLAKLAYEKQDYAAAEKALKKV 119
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N + + L+ A + + Y+E K L +P E+ G +
Sbjct: 120 ENSKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGNVDP--AFKATVEELRGDIFVAK 177
Query: 176 GKVQKAKTIFEE 187
+ AK ++
Sbjct: 178 KDIDSAKKAYQA 189
>gi|294669239|ref|ZP_06734319.1| tetratricopeptide repeat protein [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308871|gb|EFE50114.1| tetratricopeptide repeat protein [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 390
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 10/176 (5%)
Query: 23 WIAPLLILMILSLAIWFYLFDGSHE--KKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
W+ L+ I W K+ + F +LE A ++
Sbjct: 9 WVLIALLPFICFALGWVAARIDMKTVLKQAKSIPTGFYASLEALVDRNTGKAAHELAEVA 68
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ Y+ N+ + + ++G+ A + ++ P V +A L T
Sbjct: 69 DLQPQSYDL--NLTLGKLYRSRGENDKAIRLLKTLSE---LPDTVGD-KKQRALFELGKT 122
Query: 141 SSYEEISKILQK--LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ ++ L+ + M + A E L + +KA + L+ D +
Sbjct: 123 YQSAGLVDRAEQIFLALQNGNMAKGAREHLLHIYQQDRDWEKAVETAQLLSHDEQT 178
>gi|253995883|ref|YP_003047947.1| hypothetical protein Mmol_0510 [Methylotenera mobilis JLW8]
gi|253982562|gb|ACT47420.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8]
Length = 330
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 9/119 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ +L + + A ++ + K L +L +G A +
Sbjct: 28 ASADELKDISKLADQGQTAVALDRINTFIAANPKNAQAL--FMKGVLLAEQGRRDEAIKS 85
Query: 112 FLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
F +V P A L A D +++ K L+ + ++P + A+E LG
Sbjct: 86 FTEVTERFPNLPEPYNNLAVLYA-----DQGQFDKARKALET-AIKTHPSYATAHENLG 138
>gi|83309106|ref|YP_419370.1| thioredoxin domain-containing protein [Magnetospirillum magneticum
AMB-1]
gi|82943947|dbj|BAE48811.1| Thioredoxin domain-containing protein [Magnetospirillum magneticum
AMB-1]
Length = 310
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A+A + A + F +IL + + ++ + I V G T A + +
Sbjct: 140 DYIAEAKRVLEEGDPQTAATIFNQILQEAPDNASAMAGLLRCLIAV--GQTAQAESMLGR 197
Query: 115 VANDDLAPLAVRYAAT-LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+A + + AT L+ A E+ + L ++P A L ++
Sbjct: 198 LAPEIARHPDITAVATALELARHAGGVGEAAELRRRLA-----ADPDDHQARYDLALAYY 252
Query: 174 KFGKVQKAKT 183
G+V+ A
Sbjct: 253 AAGEVETAVD 262
>gi|326575995|gb|EGE25918.1| hypothetical protein E9W_03505 [Moraxella catarrhalis CO72]
Length = 277
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 22/178 (12%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQA---------------LELFNSNKLDDA 72
+L++L++ + + ++ K + + + L+ L +
Sbjct: 30 AVLLVLAVFFGWQYYQKNYAKIDTVAADTYTSISVRDERLVQAYLNPQLDEATKQALAEE 89
Query: 73 RSSF-----EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
+ + N +Y + M A D A + + +L +
Sbjct: 90 EKRLFGDIDALVAAHGNTVYAWQALMIKARHQTNNNDLDGAVATLSQATSINLDDDGLIA 149
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
A ++ A ++ I + + P+ E+LG ++ AK+ +
Sbjct: 150 IAKIRHARAMLANGDTNGALSIANE-AMPT-AFEASRQELLGDIYHAKNEIDNAKSAY 205
>gi|145299529|ref|YP_001142370.1| hypothetical protein ASA_2597 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852301|gb|ABO90622.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 216
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 6/192 (3%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALE 62
+ + K + +A +I ++ L W Y D + + + +
Sbjct: 5 TTEEQQVEVIKSWWKENGTSVLAGTVI-GLVGLFGWRYYNDYQLTNQ-EAASQAYNEISA 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
I + Y L+ + +A+ V AAE +VA++
Sbjct: 63 QLAKGDAATFEQVQAFITDHKGEAYAELAALQLAAAAVKANKLDLAAEQLTQVASNG--D 120
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++R A L+ A +L D +E L K++ E+ G K GK ++A+
Sbjct: 121 ESIRPIAALRLARVLNDQGKADEALTQLGKINND--AFKAQVAEVRGDILYKQGKAEEAR 178
Query: 183 TIFEELAKDNNS 194
++ A
Sbjct: 179 DAYQAAADAGGL 190
>gi|295676901|ref|YP_003605425.1| Protein of unknown function DUF2133 [Burkholderia sp. CCGE1002]
gi|295436744|gb|ADG15914.1| Protein of unknown function DUF2133 [Burkholderia sp. CCGE1002]
Length = 209
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 4/168 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDD-ARSSFEKI 79
+ ++L++L + ++ ++ + Q + + AR + +
Sbjct: 20 WGNATTWIVLVVLLAGASWNGWNFWQRRQAAEAAVLYDQVQQATATGDKARIARVAADME 79
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
Y ++ + +A L A GD A + L+ A D + A L+ AS+L+D
Sbjct: 80 DKFGRTAYAQMTALGVAKALYAAGDEAGA-KAQLQWAIDHAKDDEFKQVAKLRMASLLLD 138
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+Y++ +L + + ++A GK A+ ++
Sbjct: 139 DKAYDQGLALLAEPQSDAFKGVVADRRGDLLAA--QGKRDDARAAYKL 184
>gi|154150715|ref|YP_001404333.1| TPR repeat-containing protein [Candidatus Methanoregula boonei 6A8]
gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
Length = 4079
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 9/140 (6%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+KN G F + L L + D+A ++F+K + D + + + L A G NA
Sbjct: 3300 EKNYAGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNND--AFYHKGVSLAATGKLTNA 3357
Query: 109 AEIFL-KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
E F + D + L L D + + +K + P + A +
Sbjct: 3358 MEAFDHVIQADPGSVQGW-----LHRGMALFDLGRFNDAISSYKK-ALEIGPTNADAWYL 3411
Query: 168 LGISALKFGKVQKAKTIFEE 187
+G S +A F+
Sbjct: 3412 VGRSYYALNTYDEAIAAFDR 3431
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 8/153 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ L L +K +A ++F+ L+ D L L +A +F
Sbjct: 2696 LEKGLALARLSKNKEAVAAFDATLALDPANVPAL--FNKGLALANLKKFADAITVFDAAL 2753
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
D A Y A Y++ + +P G++ + G
Sbjct: 2754 RID----AKHYEAWFAKGYAQSRLRHYDDAVGAF-DHALAIDPGRYAVWYEKGVALARAG 2808
Query: 177 KVQKAKTIF-EELAKDNNSPFGISTRSQMILAN 208
K +A F E +A+D+ P + + +L
Sbjct: 2809 KNDEAVAAFSEAIARDDKKPEAQYEKGRALLEL 2841
>gi|158425881|ref|YP_001527173.1| thioredoxin precursor [Azorhizobium caulinodans ORS 571]
gi|158332770|dbj|BAF90255.1| thioredoxin precursor [Azorhizobium caulinodans ORS 571]
Length = 304
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 8/145 (5%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ E A + A ++F +IL+++ LS + A +L+ GD +
Sbjct: 126 TGADAGIAEILEAAEQALAEGDAVGAGNAFAQILAEEPDNLKALSGLARAHVLL--GDLE 183
Query: 107 NAAEIFLKV-ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A V AN P A ++ A D E+ + ++P + A
Sbjct: 184 QAEATLAGVPANKANDPAVASARAAIELARQTADLGETAELEA-----AVAADPANHQAR 238
Query: 166 EILGISALKFGKVQKAKTIFEELAK 190
L ++ GK + A E+ K
Sbjct: 239 FDLALALAAGGKREDALVHLLEIVK 263
>gi|134097469|ref|YP_001103130.1| serine/threonine protein kinase [Saccharopolyspora erythraea NRRL
2338]
gi|291004534|ref|ZP_06562507.1| serine/threonine protein kinase [Saccharopolyspora erythraea NRRL
2338]
gi|133910092|emb|CAM00205.1| serine/threonine protein kinase [Saccharopolyspora erythraea NRRL
2338]
Length = 520
Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 17/159 (10%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKI-----LSQDNKLYNPL-SNMYIASILVAKG 103
+N + E F Q+ L ++ A E + + L + A I+V G
Sbjct: 338 RNAISEAFQQSGILLREDRHAQAADVLEAAIRPAGEALGAENPEVLELRLRRAIIMVFGG 397
Query: 104 DTKNAAEIFLKVAND---------DLAPLAVRYAATLQAASILVDTS--SYEEISKILQK 152
+ + A F + + A +R AA +A V + + + ++
Sbjct: 398 EHRAALPEFDALEAAYTRTAGPTSEKAVECLRQAADCRAELGQVTLALRQFHDALSRIRA 457
Query: 153 LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+ M +G L + +A+ + L D
Sbjct: 458 TGGDVSEMAIEVRLDIGKLHLLENNLTEARETLQALHDD 496
>gi|264679421|ref|YP_003279328.1| hypothetical protein CtCNB1_3286 [Comamonas testosteroni CNB-2]
gi|262209934|gb|ACY34032.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 225
Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 12/185 (6%)
Query: 9 SYKGKCKMGKCCY----KWIAPLLILMILSLAIW--FYLFDGSHEKKKNIVGENFAQALE 62
+ + + K + I +L+++ L LA W + + + + + +AL
Sbjct: 8 EEQEQIEQLKHFWNSWGTLITSVLVVVFLGLAGWNGWQYWQKRQATQASALEFAVDEALT 67
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++ + D A S + + M AS+ K D A ++ D+
Sbjct: 68 AKDAARADQAFSELRDKYAGTAQAAQTALLMAKASVEAGKLDDAKAQLSWVADKGDES-- 125
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A ++ +S+L SY+E K+L+ S Q G + GK +A
Sbjct: 126 --FKALARIRLSSVLEQQKSYDEGLKVLEAAMPESYAGLQADRR--GDLYVALGKQAEAV 181
Query: 183 TIFEE 187
++
Sbjct: 182 AQYQA 186
>gi|309362712|emb|CAP27437.2| hypothetical protein CBG_07728 [Caenorhabditis briggsae AF16]
Length = 928
Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILS---QDNKLYNPLSNMY--IASILVAKGDTKNAA 109
+ +A L ++ ++A F+ +++ + Y + Y I + D A
Sbjct: 501 DILDRADNLVEKHQYEEAMELFDHVIAVYPASTRAYFGKARAYDIRGEIEADETDRDKAI 560
Query: 110 EIFLKVANDDLAPLAV 125
EI+ K+ ++ P A+
Sbjct: 561 EIYEKILDNSGVPDAL 576
>gi|268581939|ref|XP_002645953.1| Hypothetical protein CBG07728 [Caenorhabditis briggsae]
Length = 875
Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILS---QDNKLYNPLSNMY--IASILVAKGDTKNAA 109
+ +A L ++ ++A F+ +++ + Y + Y I + D A
Sbjct: 456 DILDRADNLVEKHQYEEAMELFDHVIAVYPASTRAYFGKARAYDIRGEIEADETDRDKAI 515
Query: 110 EIFLKVANDDLAPLAVRYAATLQ 132
EI+ K+ ++ P A+ A +
Sbjct: 516 EIYEKILDNSGVPDALFRQAAQR 538
>gi|88798070|ref|ZP_01113657.1| protein containing tetratricopeptide repeat [Reinekea sp. MED297]
gi|88779267|gb|EAR10455.1| protein containing tetratricopeptide repeat [Reinekea sp. MED297]
Length = 647
Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 134 ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDN 192
I + +Y+E +++ P A LG + G +A+ ++ LA D
Sbjct: 267 GLIQMQEGAYDEAIFSFERVLI-FEPNQHRARLELGRAYYLTGNFYRAREALQQVLAVDP 325
Query: 193 NSPFGISTRSQMILANIIASDQRNK 217
P G+ R Q+IL I +++R +
Sbjct: 326 --PQGVRQRVQLILNRIDQAERRQQ 348
>gi|254434614|ref|ZP_05048122.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
oceani AFC27]
gi|207090947|gb|EDZ68218.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
oceani AFC27]
Length = 926
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
++ +N G +AQ L F + DA +SF+K LS++ + + Y +G
Sbjct: 257 SKRARNHPGVTYAQGLLHFQQQQYADALTSFQKTLSKNPEYMP--AVFYAGIAYYQQGQL 314
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A ++ + A A I + +Y IL+ + NP A
Sbjct: 315 TQAGQLLNQFLKR----FPHSDTAAKTLAMIRLREGNYTSAQAILEPIIA-QNPNDTAAL 369
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
++LG + L GK +K+ F+++ +P
Sbjct: 370 DLLGSAILGQGKPEKSAAYFQKVT--AQTPES 399
>gi|107103321|ref|ZP_01367239.1| hypothetical protein PaerPA_01004390 [Pseudomonas aeruginosa PACS2]
Length = 214
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L + ++ W + + + AL K+ S+
Sbjct: 28 GILALAVVFGWQAWQKYQTNQAQGASIVYQQLIETALNPTGQPDPAKVAELAGKLKSEFG 87
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +A V D A + A + A +L
Sbjct: 88 GTHYAQYGSLFVAKVAVDSGKLDDAVAELKAVM-DKPADATLGELARQRLARVLAAQGKV 146
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
EE K+L+ + E+ G ++ + +A+ +E+
Sbjct: 147 EEGLKLLEGDA--DKAYVSTREELKGDLLVQLKRTDEARAAYEK 188
>gi|307247634|ref|ZP_07529677.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|306855904|gb|EFM88064.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 495
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 44 GSHEKKKNIVGENFAQA-----LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ E + +A + L K D+A ++F + +D+ ++ + +
Sbjct: 19 AYRNVNREDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDSTELYAIAQVNLGIT 78
Query: 99 LVAKGDTKNAAEIFLKVANDDLA 121
L +G A + V +D A
Sbjct: 79 LRKQGRGDEAIVAYRNVNREDSA 101
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 25/168 (14%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L K+D+A ++ + +D+ + + + L +G A F V+ +D
Sbjct: 5 IALGKQGKVDEAIVAYRNVNREDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDS 64
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK------ 174
+ A + L +E E +K
Sbjct: 65 --TELYAIAQVNLGITLRKQGRGDE----------AIVAYRNVNREDSAKLYVKVQFLLW 112
Query: 175 -----FGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
K+ +A+ F + ++ + T++Q+ L + + +
Sbjct: 113 LIFESQDKLDEARDAFNNIRLSDSV--ELYTKAQVYLKVLNIGKKEIR 158
>gi|237756217|ref|ZP_04584781.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691627|gb|EEP60671.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 964
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 11/165 (6%)
Query: 48 KKKNIVGENFAQALELF--NSNKLDDARSSFEKILSQDNKLYNP--LSNMYIASILVAKG 103
K + ++ A L S + S K Y + + +A I KG
Sbjct: 660 TKYSGTKDSIDAAYNLIILESKGSSEDVESMIKSFLTKYPKYPLANILKIQLAEIYQNKG 719
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN-PMHQ 162
+NA +I+ +VA + A+ AT + A + ++ ++L +N
Sbjct: 720 KIENAIKIYQEVAAVNSKESAL---ATYKLAESYYKLNQLDKAKQVLIDYLNTNNEEYKL 776
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ +L K + + I+EEL ++++ F + ++++L
Sbjct: 777 LSKLLLAEIYEKQNDLDNSIKIYEELKENDDVKFKL---AKILLQ 818
>gi|212710613|ref|ZP_03318741.1| hypothetical protein PROVALCAL_01679 [Providencia alcalifaciens DSM
30120]
gi|212686694|gb|EEB46222.1| hypothetical protein PROVALCAL_01679 [Providencia alcalifaciens DSM
30120]
Length = 207
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
W Y + S + + +K ++ N +Y+ ++ + +A
Sbjct: 38 GWNYWQSHKSNV-LQESAAKYEVVNTQLRSG-SAEGIQAAQKFAAETNDVYSAMTGLELA 95
Query: 97 SILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
+ KGD A + +A ++ L+ A I + + + + K+
Sbjct: 96 QVFADKGDLAGAEKALTDALAKAKTVD--MQDVINLRLARIQLALGNADAALASVAKI-- 151
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
A ++ G + L+ G AK + +
Sbjct: 152 QGKSWQATAQDVRGDALLQKGDKSGAKAAYTQ 183
>gi|327537990|gb|EGF24685.1| protein containing ASPIC/UnbV domain [Rhodopirellula baltica WH47]
Length = 1329
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 63/179 (35%), Gaps = 24/179 (13%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLF-----------DGSHEKK 49
M S+ S + W+ ++ + +L+ A +++ DG + +
Sbjct: 1 MTSSQSPTSKQSPSGKQPAINIWLVAVVAIGLLAAAGYWFSRGPAVPPDDAPGDGGNNQT 60
Query: 50 KNIVGENFA---QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ + +N AL + DDA +++ + + ++ + +
Sbjct: 61 EQLASQNLDLNRVALASMENLDTDDAETAWAALSKSRPED-RSIAMNRALNRALT----- 114
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
+ VA D A + AA + AS+L +T I K ++ +P+ A
Sbjct: 115 --IDELSAVATDASAKPEEKQAARQRLASLLSETRGL--IQKYVELGGDPNLATWMNAR 169
>gi|330807649|ref|YP_004352111.1| hypothetical protein PSEBR_a938 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375757|gb|AEA67107.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 213
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 10/192 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M S D K + + L+ +++ + + + + Q
Sbjct: 1 MSSTEDEQLADLKDWWTRNGKPLVTGGLLALVI--VFGWQAYQKYQSNQSQGASVLYQQL 58
Query: 61 LE--LFNSNKLDDARSS--FEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
LE L K D AR + K+ + Y +++A + V G +AA +
Sbjct: 59 LETTLTPDGKPDAARVADLAGKLDKEFGGTAYAQYGRLFVAKVAVDSGKLDDAATELKGI 118
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D A + A + A +L + E+ K+L + E+ G ++
Sbjct: 119 V-DKPANPTLGEVARQRLAQVLAAQNKAEDALKLLDGDA--DKAFLATREELKGDLLVQL 175
Query: 176 GKVQKAKTIFEE 187
G+ +A +++
Sbjct: 176 GRADEAHAAYQK 187
>gi|91079140|ref|XP_975466.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) [Tribolium castaneum]
Length = 843
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 12/210 (5%)
Query: 4 NNDANSYKGK-CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKN----IVGENFA 58
N+D + Y+ K CK + C A L+ +I Y + K
Sbjct: 377 NDDLHKYEIKKCKDAEYCILTAAKLIAPLIEDTFSLGYDWCVMSIKNSEYARLASNLEIN 436
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+A+ N+L +A + + + + + ++ I +GD +NA + + +V
Sbjct: 437 KAVMFLKQNQLPEAIDTLKAFEKD--SVIATNAAINLSFIYYLQGDIENATK-YAQVVET 493
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
+ A Y + L+ E+ + + +P H A LG+ + G
Sbjct: 494 NPTKSADGYV---NLGACLMAKGQPEDAINSFKN-ALELDPTHFEAIYNLGLVLKRQGHY 549
Query: 179 QKAKTIFEELAKDNNSPFGISTRSQMILAN 208
+A F+ + + + +L
Sbjct: 550 AEALQCFQRFSGSLALLPNVVYQVANLLEL 579
>gi|170733170|ref|YP_001765117.1| hypothetical protein Bcenmc03_1834 [Burkholderia cenocepacia MC0-3]
gi|206560245|ref|YP_002231009.1| hypothetical protein BCAL1882 [Burkholderia cenocepacia J2315]
gi|254248072|ref|ZP_04941393.1| hypothetical protein BCPG_02897 [Burkholderia cenocepacia PC184]
gi|124872848|gb|EAY64564.1| hypothetical protein BCPG_02897 [Burkholderia cenocepacia PC184]
gi|169816412|gb|ACA90995.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
gi|198036286|emb|CAR52182.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 209
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 72/199 (36%), Gaps = 7/199 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESLKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + + Y ++ + A+ + A+ L+ A D
Sbjct: 63 AAANDKATMARAAADMEDKFGSTPYAQMTAL-AAAKTLYAAGDAAGAKAQLQWAVDHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGLVADRRGDLLAAQGKTDDAR 179
Query: 183 TIFEELAKDNNSPFGISTR 201
+ +LA D S S R
Sbjct: 180 AAY-KLALDGLSKDDQSAR 197
>gi|213971516|ref|ZP_03399627.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301386121|ref|ZP_07234539.1| hypothetical protein PsyrptM_25944 [Pseudomonas syringae pv. tomato
Max13]
gi|302060179|ref|ZP_07251720.1| hypothetical protein PsyrptK_09317 [Pseudomonas syringae pv. tomato
K40]
gi|302135122|ref|ZP_07261112.1| hypothetical protein PsyrptN_27281 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213923708|gb|EEB57292.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|330872877|gb|EGH07026.1| hypothetical protein PSYMP_01544 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330965917|gb|EGH66177.1| hypothetical protein PSYAC_14990 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331019378|gb|EGH99434.1| hypothetical protein PLA106_25353 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 213
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQFWHRYQASQSQGASMLYQQLLETALTPSGQADTARVAEISGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +AA VA D A + A + A +L +
Sbjct: 87 GTTYAQFGSLFVAKVAVDAGKLDDAAAELKAVA-DKPANDTLGEIARQRLARVLAAQNKT 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G + G+ +A +++
Sbjct: 146 DDALKLLAGDA--DKAFLASREELKGDLLEQLGRTDEAHAAYQK 187
>gi|293610298|ref|ZP_06692599.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827530|gb|EFF85894.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 232
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 69/192 (35%), Gaps = 8/192 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFD---GSHEKKKNIVGENF 57
M +++ K K I+ +LI +I + W Y S + + V +
Sbjct: 1 MSVSDEEQFDSLKSFAKKYGSAMISGILIALI-AFFGWEYWQKRNLASSQTETAKVQQLM 59
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKV 115
+A ++ N L +S +KI+ D + + +A + K D A + KV
Sbjct: 60 DEANASADNPNALTSVTASADKIVKDDIDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKV 119
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N + + L+ A + + Y+E K L +P E+ G +
Sbjct: 120 ENSKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGNVDP--AFKATVEELRGDIFVAK 177
Query: 176 GKVQKAKTIFEE 187
V AK ++
Sbjct: 178 KDVDSAKKAYQA 189
>gi|312129683|ref|YP_003997023.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311906229|gb|ADQ16670.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
Length = 996
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 6/167 (3%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILV 100
+ ++ + ++ G F A +LF + K D A S+F K +SQ Y P +N I +
Sbjct: 715 YKKNNPEGSSVQGLQFETAKDLFFAEKYDAAISAFTKFISQYPGSVYTPEANYLIGESYL 774
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
T A + + + N+ A ++A I + +EE ++ ++ ++
Sbjct: 775 GLKKTTEALKYYQTIVNEGQL--EYLSQAASRSAGIYFEKKQFEEAARNYNQVVNTTSDQ 832
Query: 161 H--QFANEILGISALKFGKVQKAKTIFEEL-AKDNNSPFGISTRSQM 204
A E S + K + + E++ G R+++
Sbjct: 833 REMIVAYEGWMKSQYELKKYDQTLELAEKILTTGPEVVVGAKNRAEL 879
>gi|45655967|ref|YP_000053.1| hypothetical protein LIC10053 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599200|gb|AAS68690.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 300
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+G+ F QAL L K +A +E ++ K Y S + + ++ +G++K A EI+
Sbjct: 6 IGKRFNQALNLEKEGKYPEAILLYEGLIQSQPK-YQK-SYLNLGALYSKQGNSKKAIEIY 63
Query: 113 LKVANDDLAPLAV 125
K +P
Sbjct: 64 QKALQVGKSPELY 76
>gi|270004229|gb|EFA00677.1| hypothetical protein TcasGA2_TC003554 [Tribolium castaneum]
Length = 858
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 12/210 (5%)
Query: 4 NNDANSYKGK-CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKN----IVGENFA 58
N+D + Y+ K CK + C A L+ +I Y + K
Sbjct: 392 NDDLHKYEIKKCKDAEYCILTAAKLIAPLIEDTFSLGYDWCVMSIKNSEYARLASNLEIN 451
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+A+ N+L +A + + + + + ++ I +GD +NA + + +V
Sbjct: 452 KAVMFLKQNQLPEAIDTLKAFEKD--SVIATNAAINLSFIYYLQGDIENATK-YAQVVET 508
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
+ A Y + L+ E+ + + +P H A LG+ + G
Sbjct: 509 NPTKSADGYV---NLGACLMAKGQPEDAINSFKN-ALELDPTHFEAIYNLGLVLKRQGHY 564
Query: 179 QKAKTIFEELAKDNNSPFGISTRSQMILAN 208
+A F+ + + + +L
Sbjct: 565 AEALQCFQRFSGSLALLPNVVYQVANLLEL 594
>gi|116254297|ref|YP_770135.1| thioredoxin [Rhizobium leguminosarum bv. viciae 3841]
gi|115258945|emb|CAK10054.1| putative thioredoxin [Rhizobium leguminosarum bv. viciae 3841]
Length = 324
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 52/160 (32%), Gaps = 10/160 (6%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ + +A EL + +++A + ++ D + L+ M I +
Sbjct: 148 EAAEIEAVVTEAAELLAAGNINEAAQLYGAVMQADPENAKALAGMAECMIAANQHQRARE 207
Query: 109 A--EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
E+ ++A D + ++ A L + + L +NP A
Sbjct: 208 ILTELPEELAKDTGIQAVLMKLEQIEEARKL---GDPVALERELA-----ANPDDHEARI 259
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
L G+ +A + + + + R Q++
Sbjct: 260 KLAKIRNVEGRRDEAADHLLLIMRKDRAFDDDGARRQLLQ 299
>gi|268326185|emb|CBH39773.1| conserved hypothetical secreted protein, containing
tetratricopeptide repeats [uncultured archaeon]
Length = 474
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV-----ANDD 119
+ D+A F+ ++ Y PL+ Y+ I KGDT+ A + + K A +
Sbjct: 316 ELGRYDEAIEDFQTLIDDYESHYEPLAYRYLGMIYTEKGDTEKAKQNYDKAVELYNAQIE 375
Query: 120 LAPLAVRYAATLQAASILV---DTS--SYEEISKILQKLSEPSNPMHQFANEI---LGIS 171
P + + + + D++ +E++ L+ S ++ E LGI+
Sbjct: 376 STPDSYGGYSDRGLCYLGIGEYDSAISDFEKVI-ELEPNSVDAHSGKNAYIEAYKNLGIA 434
Query: 172 ALKFGKVQKAKTIFEE 187
G KAK EE
Sbjct: 435 YSASGDKAKAKESLEE 450
>gi|148258690|ref|YP_001243275.1| hypothetical protein BBta_7517 [Bradyrhizobium sp. BTAi1]
gi|146410863|gb|ABQ39369.1| hypothetical protein BBta_7517 [Bradyrhizobium sp. BTAi1]
Length = 703
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNK---LYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
AL L +L +A +++ +L D + L++ +L +G A + +
Sbjct: 149 ALALTRQGRLAEAEAAYRALLDHDPAHPDGWRALAH-----VLADQGRYDAAVPAYRQAL 203
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
A + + +L ++ + + +L+ P A +LG + + G
Sbjct: 204 AAQPADAGLH----VSLGDVLYKQRAFAD-AARHYRLAAELAPDDANAARLLGHALHEAG 258
Query: 177 KVQKAKTIF 185
+ +A +
Sbjct: 259 RATEAIDAY 267
>gi|302879532|ref|YP_003848096.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
gi|302582321|gb|ADL56332.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 355
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 9/116 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A +LF + A + L+ + + IL +G +A +IF +
Sbjct: 27 DELQDANQLFKQGQQTPALNKVNNYLANKPR--DAQGRFLKGLILTEQGKIADAIKIFTE 84
Query: 115 VAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ D P A L A+ D + K +++ ++P + A+E LG
Sbjct: 85 LTQDYPELPEPYNNLAVLYASQSQYDKA------KSSLEMAIRTHPSYATAHENLG 134
>gi|70732827|ref|YP_262594.1| thioredoxin [Pseudomonas fluorescens Pf-5]
gi|68347126|gb|AAY94732.1| thioredoxin, putative [Pseudomonas fluorescens Pf-5]
Length = 290
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 2/124 (1%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ DA + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLEQAEALFAEGRIGDAEALLKVLLGEDNSNAKAL--ILYARCLAERGELGEAQTV 176
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
V +D+ A + D E+ L K + ++Q A + L
Sbjct: 177 LDAVKSDEHKAALAGAKAQITFLKQAADLPDAAELKARLAKDPQDDEALYQLAIQQLARQ 236
Query: 172 ALKF 175
+
Sbjct: 237 QYEA 240
>gi|24212760|ref|NP_710241.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|24193401|gb|AAN47259.1|AE011197_11 TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
Length = 300
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+G+ F QAL L K +A +E ++ K Y S + + ++ +G++K A EI+
Sbjct: 6 IGKRFNQALNLEKEGKYPEAILLYEGLIQSQPK-YQK-SYLNLGALYSKQGNSKKAIEIY 63
Query: 113 LKVANDDLAPLAV 125
K +P
Sbjct: 64 QKALQVGKSPELY 76
>gi|182412500|ref|YP_001817566.1| hypothetical protein Oter_0677 [Opitutus terrae PB90-1]
gi|177839714|gb|ACB73966.1| hypothetical protein Oter_0677 [Opitutus terrae PB90-1]
Length = 242
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 70/206 (33%), Gaps = 22/206 (10%)
Query: 9 SYKGKCKMGKCCYKWIAPLLILM--ILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNS 66
+ + + L++++ IL W YL +K V +A A
Sbjct: 32 EERLRVFWQQNSKLVTGALVVVLLAILGKGGWEYL----QAEKDREVRRAYAAATTPAQ- 86
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+F + + + +A A +A ++ + AP +
Sbjct: 87 ------LKTFTAAHPEHPLAGA--AYLRMADDAYADRKFTDAVGLYEQAIQALDAP-VLE 137
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPS---NPMHQFANEILGISALKFGKVQKAKT 183
A L A + E L+ + + A L +SAL GK + K+
Sbjct: 138 SRARLGIAIAKLQGGRAAEGETALKAFANEAKEVKAFRVEALYHLAVSALTNGKPEDVKS 197
Query: 184 IFEELAK-DNNSPFGISTRSQMILAN 208
E+L + D SP+ + R+ M+ AN
Sbjct: 198 YSEQLMQLDPTSPW--TQRAMMLRAN 221
>gi|157737175|ref|YP_001489858.1| hypothetical protein Abu_0929 [Arcobacter butzleri RM4018]
gi|157699029|gb|ABV67189.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
Length = 437
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 39 FYLFDGSHEKKKNIVGEN-FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
Y+ + K+ + + F A + K +A + ++ +L ++ + +A
Sbjct: 45 SYILLQQYTKENKLSSDTTFILARSAYEIGKFSEALNLYKSMLKENPNNNRV--KLELAQ 102
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
A ++ +V + P VR
Sbjct: 103 TYFQLKQYDEAKALYEEVLKETGLPENVR 131
>gi|289628397|ref|ZP_06461351.1| thioredoxin [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|330869903|gb|EGH04612.1| thioredoxin [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 290
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA ELF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQELFAESRFAEAEALLKVLLGEDNTNAAAL--ILYARRLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + S+ + +HQ A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDVAELKSRLAQNSQDDDAVHQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|226939248|ref|YP_002794319.1| TPR repeat protein [Laribacter hongkongensis HLHK9]
gi|226714172|gb|ACO73310.1| TPR repeat protein [Laribacter hongkongensis HLHK9]
Length = 580
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
L ++ I +G T AA FL++A + P R +AA + + + + +
Sbjct: 56 RILFSVVAGEIAGQRGHTGAAAGTFLELAEETRDPRLAR-----RAAEMALISGNLNQAI 110
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
L L +P Q A + L ++ ++ G++ A+ + + L + +
Sbjct: 111 SSLS-LWSALDPESQLARQQLALALVRAGRLADARPLLDFLLNSPAAAAPL 160
>gi|307719874|ref|YP_003875406.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
gi|306533599|gb|ADN03133.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 839
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
G + + ++ ++A+ +F K L + L+N+ I +GD + A E
Sbjct: 44 SSGVHLLSGMIALRQDRNEEAKEAFTKALELGGEEAEALNNL--GVIYRKEGDHRKAIEY 101
Query: 112 FL-KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
F +A D P + A + D +EE +K + +P A L
Sbjct: 102 FRKALAADPDRPDILYNLA-----NACKDAGLFEEAEAAYRK-ALEHDPHLVSAYNNLAT 155
Query: 171 SALKFGKVQKAKTIFEE-LAKDNNSP 195
+ G + KA + E+ L D + P
Sbjct: 156 LYQQRGAIDKAVAVLEKGLTADPDHP 181
>gi|302307823|ref|NP_984579.2| AEL281Cp [Ashbya gossypii ATCC 10895]
gi|299789186|gb|AAS52403.2| AEL281Cp [Ashbya gossypii ATCC 10895]
Length = 1390
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
A +F KV DD P R A L+ + IL++ ++E +L+ + +P A+
Sbjct: 454 ALSLFDKVLADD--PQNYR--AKLKKSHILIERKQWDEAYALLKGV-VDRHPHLYDAHSA 508
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
G L+ G + A F+ + + S G S+
Sbjct: 509 FGWCQLQLGDTESALETFQLIINNVKSSDGTSS 541
>gi|39996558|ref|NP_952509.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39983439|gb|AAR34832.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298505574|gb|ADI84297.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 524
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 8/127 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E A+ + +N+LDDA + +++ + + ++A L +GD +A +
Sbjct: 90 ERIRMAVAVSWANRLDDAIFALRAVVADEPDN--TTARTHLARTLSWRGDQPDAIAEADR 147
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
V R A ++A ++ +S + + Q L+ + L + L+
Sbjct: 148 VLAARPGD---RDALLVKANALRWQGNSSQALPLYQQILAGSDD---FDTRLGLAFAQLQ 201
Query: 175 FGKVQKA 181
G Q+A
Sbjct: 202 TGNKQEA 208
>gi|91788324|ref|YP_549276.1| MCP methyltransferase, CheR-type [Polaromonas sp. JS666]
gi|91697549|gb|ABE44378.1| MCP methyltransferase, CheR-type [Polaromonas sp. JS666]
Length = 502
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 9/137 (6%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
G A A L+ + + + L++ L S + A L +G +A
Sbjct: 334 EAPGSALAFAQSLYEQGRYAEVVDTLLAALAEHAPLTEACSLLARA--LANQGRLADALT 391
Query: 111 IFLK-VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ + D L P L+A +L + E+ LQ+ + P AN LG
Sbjct: 392 WCDRWIVTDKLDPAGH----YLRAGVLL-EQGELEQARSSLQR-ATYLEPGFVLANFALG 445
Query: 170 ISALKFGKVQKAKTIFE 186
A + GK +A F
Sbjct: 446 NLARRRGKTGEAGKHFA 462
>gi|332709298|ref|ZP_08429260.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L]
gi|332351844|gb|EGJ31422.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L]
Length = 485
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 9/129 (6%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-VANDDLA 121
L K D+A + + K+L D + IA I + +G A F + + D
Sbjct: 175 LIAQGKWDNAIACYRKLLDLDPNQAK--GHYKIAGIWLKQGMVDTAIAAFRRSIEVDPNF 232
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P A R L D + +S + P LG + +K G++ +A
Sbjct: 233 PGAYRELIQLLIQQQKWDEAI---VSCRAVIATVGDYPWTYV---QLGDALVKKGELTEA 286
Query: 182 KTIFEELAK 190
T +++ A+
Sbjct: 287 YTCYQKAAQ 295
>gi|307718770|ref|YP_003874302.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
gi|306532495|gb|ADN02029.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 259
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Query: 84 NKLYNPLSNMYIASI-LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
+K Y + + +GD ++E FL+ A D + A ++ L++
Sbjct: 107 SKGYEAADLLEYLGLSAAREGDYSKSSEFFLR-AKDQGKDSPLLDLALARS---LIELGD 162
Query: 143 YEEISKILQKLSEPSN-PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
Y+ +L L+E SN A +LG + + + A+ E+L + S
Sbjct: 163 YDRAHDLLLPLAEQSNREYQVEALLLLGELHYRAQRYEDARDYLEKLVQIQES 215
>gi|227112684|ref|ZP_03826340.1| hypothetical protein PcarbP_06969 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 206
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 55/149 (36%), Gaps = 4/149 (2%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + ++ Q E K DA ++ EK +++ Y L+++ +A
Sbjct: 39 WRFWQSHQNDSVMAASSSYQQVTEQLAEGK-ADAITATEKFTAENKNTYGALASLELARH 97
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V + D AA+ ++ + + L+ A + + + ++ K L +
Sbjct: 98 YVDQKDFAKAAQQLVQAQSQTK-DADLLAVVNLRLARVQLQENKADDALKTLDAIKLEG- 155
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
A E+ G + G Q A+ + +
Sbjct: 156 -WASQAAEVRGDILVSKGDNQAARDAYNK 183
>gi|86742863|ref|YP_483263.1| tetratricopeptide TPR_4 [Frankia sp. CcI3]
gi|86569725|gb|ABD13534.1| Tetratricopeptide TPR_4 [Frankia sp. CcI3]
Length = 963
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 15/133 (11%)
Query: 71 DARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL--------KVANDDLAP 122
+A S + L+ +Y L G A ++ V D
Sbjct: 623 EAEPSPADANAAGMLGLGNLAALY----LQETGQLAAAVDLHTWVLARTEQVVGTDHPNT 678
Query: 123 LAVRY---AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
L +R A +A I YE I ++ E +P + L + G++
Sbjct: 679 LVLRNNLALALQKAGRISEAIGLYERILARASRILESDDPNLGISRNNLASAYWAAGRIA 738
Query: 180 KAKTIFEELAKDN 192
+A + E++ D
Sbjct: 739 EAVELLEQVVDDA 751
>gi|251788750|ref|YP_003003471.1| hypothetical protein Dd1591_1120 [Dickeya zeae Ech1591]
gi|247537371|gb|ACT05992.1| conserved hypothetical protein [Dickeya zeae Ech1591]
Length = 206
Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 5/166 (3%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A ++L I +L W + + L + +S EK ++
Sbjct: 23 KALAIGVVLGIGALVGWRFWQNHQESSAMAASAAYQQATEALSAG--TPEGINSAEKFIT 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
D+ Y L+++ +A V K D A + + ++ L+ A +L+
Sbjct: 81 GDHGNYGALASLALAHQFVEKNDIAKAEQQLRQALGQTKDGD-LQAMINLRLARVLLQQK 139
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+E K L + +++ G G Q A+ + +
Sbjct: 140 KPDEALKALDAIKLEG--WVAMVSDVRGDVLASKGDTQGARDAYNK 183
>gi|313109219|ref|ZP_07795187.1| hypothetical protein PA39016_001710028 [Pseudomonas aeruginosa
39016]
gi|310881689|gb|EFQ40283.1| hypothetical protein PA39016_001710028 [Pseudomonas aeruginosa
39016]
Length = 214
Score = 40.7 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L + ++ W + + + AL K+ S+
Sbjct: 28 GILALAVVFGWQAWQKYQTNQAQGASIVYQQLIETALNPAGQPDPAKVAELAGKLKSEFG 87
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +A V D A + A + A +L
Sbjct: 88 GTHYAQYGSLFVAKVAVDSGKLDDAVAELKAVM-DKPADATLGELARQRLARVLAAQGKV 146
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
EE K+L + E+ G ++ + +A+ +E+
Sbjct: 147 EEGLKLLDGDA--DKAYLSTREELKGDLLVQLKRTDEARAAYEK 188
>gi|289647760|ref|ZP_06479103.1| thioredoxin [Pseudomonas syringae pv. aesculi str. 2250]
Length = 290
Score = 40.7 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA ELF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQELFAESRFAEAEALLKVLLGEDNTNAAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + S+ +HQ A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDVAELKSRLAQNSQDDEAVHQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|254471122|ref|ZP_05084525.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudovibrio sp. JE062]
gi|211960264|gb|EEA95461.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudovibrio sp. JE062]
Length = 272
Score = 40.7 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFE---KILSQDNKLYNP-LSNMYIASILVAKGDT- 105
+ E + +AL+L + K D+A +++ ++ +D+ L++M + D
Sbjct: 7 EALAEAYNRALDLEKAGKFDEAAEAYKHVLELDPEDHGGVAVRLASMGKGASPTKAPDAY 66
Query: 106 -----KNAAEIFLKVANDD---LAPLAVRY 127
AE+F V D PL VR
Sbjct: 67 VSTLFDQHAEVFDMVLVDQLGYSVPLMVRD 96
>gi|256375102|ref|YP_003098762.1| serine/threonine protein kinase [Actinosynnema mirum DSM 43827]
gi|255919405|gb|ACU34916.1| serine/threonine protein kinase [Actinosynnema mirum DSM 43827]
Length = 523
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 61/173 (35%), Gaps = 17/173 (9%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLS------NMYIASILVAKGDTKNAA 109
+ ++ +L + + A ++ ++Q S A+IL+ GD + A
Sbjct: 344 AYDKSAQLLDEERYTQAADVLQRAIAQSAAALGKKSPRILKMRTRRAAILIVGGDYQRAL 403
Query: 110 EIFLKVAND---------DLAPLAVRYAATLQAASILVDTS--SYEEISKILQKLSEPSN 158
F + + A ++ AA +A + ++++ ++ ++
Sbjct: 404 PEFDSLTDAYSRTLGSTSPEALECLQEAAHCRAELGQATAALRQFQQVLTHVRAAGGDAS 463
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
P +G+ L GK +A + + L D G + NI+A
Sbjct: 464 PTALDLRRSIGVLLLSEGKTLEAVSFLQPLYDDLLLVQGPQDEETEEVGNILA 516
>gi|15603877|ref|NP_246951.1| hypothetical protein PM2012 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722454|gb|AAK04096.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 203
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 7/184 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ K YK + +I+ + W Y K + QA L+
Sbjct: 6 EEEQELNEIKTWWKENYKTLIASVIIAFGGVFGWNYWQSH-QLNKIQQTSAQYEQA--LY 62
Query: 65 NSNKLDDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ + E+ + ++K Y L+ + A + V K + A + +
Sbjct: 63 STADFASKSAQIEQFVQANSKTSYAVLALLEKAKVEVEKKEFAQAEQSLKQALAQ-STDE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ L+ AS+ +++ L++ + N ++G L G AK
Sbjct: 122 NLSSITALRLASVQYQQQAFDMALDSLKQ--VKESSWDSRKNLLIGDILLAKGDKVAAKA 179
Query: 184 IFEE 187
+++
Sbjct: 180 SYQQ 183
>gi|94310029|ref|YP_583239.1| hypothetical protein Rmet_1084 [Cupriavidus metallidurans CH34]
gi|93353881|gb|ABF07970.1| conserved hypothetical protein with TPR domain [Cupriavidus
metallidurans CH34]
Length = 251
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND- 118
A + N + DDA + F+++L+ + + + A + G +A + F ++A D
Sbjct: 76 AQKAANEKRYDDAIAGFDRVLADNPRN--AQARFQRAWAMAKAGREDDAIKAFAEMAQDF 133
Query: 119 DLAPLAVRYAATLQA 133
P A L A
Sbjct: 134 PELPEPHNNLALLYA 148
>gi|326385959|ref|ZP_08207583.1| cellulose synthase protein C precursor [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209184|gb|EGD59977.1| cellulose synthase protein C precursor [Novosphingobium
nitrogenifigens DSM 19370]
Length = 1150
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 8/147 (5%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ G+ +N L A FE +++++ + L + + + + +G+
Sbjct: 118 SANADTGGQARVAGFAALQANDLATANRQFESAFARNHRDADALGGLGL--VALKQGNFA 175
Query: 107 NAAEIFLK------VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
A E + A A + +Y A L A L + K+ + L
Sbjct: 176 KAREYLEQSSRLGDAAKWAEALASAKYYAGLGDAQNLAARGQLADAQKMAEDLVRTGGAR 235
Query: 161 HQFANEILGISALKFGKVQKAKTIFEE 187
++ A E+L + G+ A ++ +
Sbjct: 236 NETALELLADIYDRQGRYADAADLYRQ 262
>gi|108756832|ref|YP_630167.1| hypothetical protein MXAN_1923 [Myxococcus xanthus DK 1622]
gi|108460712|gb|ABF85897.1| hypothetical protein MXAN_1923 [Myxococcus xanthus DK 1622]
Length = 809
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 23/149 (15%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN---- 117
+L ++++ AR++F + N + + ++ + V +GD A F ++A
Sbjct: 202 DLSPADRITQARAAFTPLAQAPNGAFRLQAAYHLGVLSVQEGDLPAAITRFQQLATPPSA 261
Query: 118 ------------DDLAPLA------VRYAATLQAASILVDTSSYEEISKILQKLSEPSNP 159
AP VR A + +L +T +++ ++ S
Sbjct: 262 QAAQAAPGRTGPRRSAPTPEEEARRVRELALMSLGRLLYETGRFDDALDRYGQVPRDSES 321
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEEL 188
E ++ G Q+AK + L
Sbjct: 322 FPDSLYES-AWVHVRRGHYQQAKNAIDIL 349
>gi|91202470|emb|CAJ72109.1| hypothetical protein kustd1364 [Candidatus Kuenenia
stuttgartiensis]
Length = 308
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 21/186 (11%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNI-VGE------NFAQALELFNSNKLD 70
+ + I L + ++S A + G+ + AL + K
Sbjct: 4 RSGFFPIIVLAVTFLISTASYGKWVWNKDTGWMQPPTGDVGSPEQRYKNALFMLVEQKYV 63
Query: 71 DARSSFEKILSQDNK--LYNPLSNMYIASILVAKGDTKNAAEIFLKVAND----DLAPLA 124
A F K++ Y LS + I GD A + + V +
Sbjct: 64 SAIKEF-KLIIDGYPDSAYAELSQINIGWAYYLNGDYNRALKAYDTVLREYPGTKRTKEV 122
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKA 181
+ A + +D E + + + ++PM A E + K G + A
Sbjct: 123 HEKVFQVGIAQMEMD----ENAAIRVFEKIIENHPMGPIAPESQIKIADCYFKLGYYEDA 178
Query: 182 KTIFEE 187
+++
Sbjct: 179 VDAYKK 184
>gi|301783751|ref|XP_002927291.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Ailuropoda melanoleuca]
Length = 795
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 13/129 (10%)
Query: 62 ELFNSNKLDDARSSFEKILSQDN---KLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
L + + ++A + + + Y+ L AS+L + K A EI+ +
Sbjct: 445 ALRSQERKEEAINLLKDSIKYGPEFADAYSSL-----ASLLAEQERFKEAEEIYQAGIKN 499
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
+ LVDT S E+ Q+ + +P H A LG G
Sbjct: 500 CPDSSDLHN----NYGVFLVDTGSPEKAVAHYQQ-AITLSPSHHVAMGNLGRLYRSLGDN 554
Query: 179 QKAKTIFEE 187
A+ ++
Sbjct: 555 SVAEEWYKR 563
>gi|28868643|ref|NP_791262.1| hypothetical protein PSPTO_1436 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851881|gb|AAO54957.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 213
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQFWHRYQASQSQGASMLYQQLLETALTPSGQADTARVAEISGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +AA VA D A + A + A +L +
Sbjct: 87 GTTYAQFGSLFVAKVAVDAGKLDDAAAELKAVA-DKPANDTLGEIARQRLARVLAAQNKT 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G + G+ +A +++
Sbjct: 146 DDALKLLAGDA--DKAFLASREELKGDLLEQLGRTDEAYAAYQK 187
>gi|153006594|ref|YP_001380919.1| hypothetical protein Anae109_3756 [Anaeromyxobacter sp. Fw109-5]
gi|152030167|gb|ABS27935.1| Tetratricopeptide TPR_4 [Anaeromyxobacter sp. Fw109-5]
Length = 516
Score = 40.4 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 28/72 (38%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ G +FA A +L + K +A +FEK+ + + A G AA
Sbjct: 312 RAEAGTHFAAAQKLLDEGKPAEAAQAFEKLAADPRGGDAANALHNAAVAWDKAGKADRAA 371
Query: 110 EIFLKVANDDLA 121
EI ++ +
Sbjct: 372 EIRERILKEHAD 383
>gi|168000971|ref|XP_001753189.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695888|gb|EDQ82230.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 383
Score = 40.4 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 22/155 (14%)
Query: 48 KKKNIVGENFAQALELFNS---------------NKLDDARSSFEKILSQDNKLYNPLSN 92
+K E+F +A+ L + DDA + + + D + Y +
Sbjct: 200 QKYEQAAEDFTKAIALAPDAPVPFLNRAISYEAMGRFDDAIADCKTAIINDPEEYA--AW 257
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
+ ++ V D A + + + R L+ A +L + + EE K++Q
Sbjct: 258 FNLGNVEVRVRDYDAALNAYSRASRLAPGIAGYR----LKEALVLFELNRLEECRKLVQG 313
Query: 153 LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
L P + A+ +L K G A+ F E
Sbjct: 314 L-VRKYPNYAEAHAVLAAVLWKEGNRDLAEGQFSE 347
>gi|114800067|ref|YP_761319.1| hypothetical protein HNE_2630 [Hyphomonas neptunium ATCC 15444]
gi|114740241|gb|ABI78366.1| hypothetical protein HNE_2630 [Hyphomonas neptunium ATCC 15444]
Length = 467
Score = 40.4 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 2/170 (1%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK-LDDARSSFEKILSQD 83
A + M + A + G+ + +A +NK A ++ + +
Sbjct: 10 AIVAGAMAVMGAGTALAQACEETQFSAKTGQTYLEAETAAMANKDWATAIGKLNQLRNGE 69
Query: 84 NKLYNPLSNMYI-ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
Y + + + A I + +GD A L N P R A I + +
Sbjct: 70 LNCYEEGAVIRLSAYIKIEQGDRAGAVRDLLDAINKGYIPEDQRAQTYYNIAQIYLQDEN 129
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+ +++ + + L + + +A EE+ +++
Sbjct: 130 LTQSLDYMKRWMQAGGKPDRSQKWQLAVLYQRADNNAEAVKWAEEVRRED 179
>gi|326913950|ref|XP_003203294.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Meleagris
gallopavo]
Length = 499
Score = 40.4 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 57/154 (37%), Gaps = 24/154 (15%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
V + +L + +L DA S F + D+ Y ++ A++ +A G +K A
Sbjct: 30 AEVEKQLEMGKKLLAAGQLADALSHFHAAIEGDSDNY--IAYYRRATVYLAMGKSKAAIR 87
Query: 111 IFLKVANDDLAPLAVRYA--ATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANE 166
KV + A LQ +L+ ++E + + S PSN + A
Sbjct: 88 DLSKVV------ELKQDFTSARLQRGHLLLKQGKFDEAEDDFKNVLKSNPSNNEEKEAQT 141
Query: 167 IL------------GISALKFGKVQKAKTIFEEL 188
L +SA + + A + +E+
Sbjct: 142 QLTKSDELQRLYSQALSAYQQEDYEAAIPLLDEI 175
>gi|316931752|ref|YP_004106734.1| thioredoxin [Rhodopseudomonas palustris DX-1]
gi|315599466|gb|ADU42001.1| thioredoxin [Rhodopseudomonas palustris DX-1]
Length = 306
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 53/143 (37%), Gaps = 10/143 (6%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
E +A + + A S + ++L D ++ + A + G T+ A
Sbjct: 131 APSAAELLQEAEAILAEGDVQTAASIYAEVLRSDAANIPAIAGL--ARCYMQTGATEQAK 188
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEI 167
+ VA R A ++A ++D + E + +L ++P+ A
Sbjct: 189 KTLALVAEAG------REDAAVKAVQAMIDLAEQAESLGPIAELEQKVAADPLDHQARFD 242
Query: 168 LGISALKFGKVQKAKTIFEELAK 190
L ++ G+ ++A ++ K
Sbjct: 243 LAVALNAAGRREEATGHLLDIVK 265
>gi|255013274|ref|ZP_05285400.1| putative N-acetylglucosamine transferase [Bacteroides sp. 2_1_7]
Length = 485
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 15/142 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYN---PLSNMYIASILVAKGDTKNAAEIFL-KVAND 118
L + A +++ ++ Y L ++ GD + A E F + D
Sbjct: 172 LETEGDIPRAIELCNELIDKNPFSYEYWFTLGRLHSMV-----GDYEKAIEAFDFALTCD 226
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D + A L SYE+ + Q++ M + + ++ +K +
Sbjct: 227 DSDTEL-----KILKAYCLYMNESYEKAIEEYQEIEGDEEVMRRIS-PLMAECYMKLEQY 280
Query: 179 QKAKTIFEELAKDNNSPFGIST 200
+KA + + D + G +
Sbjct: 281 EKAYQLLSTIINDPDMEDGPTN 302
>gi|226228014|ref|YP_002762120.1| hypothetical protein GAU_2608 [Gemmatimonas aurantiaca T-27]
gi|226091205|dbj|BAH39650.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 350
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 13 KCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDA 72
+ + + W A ++++ +L + + + ++ A+A+ + + A
Sbjct: 159 RSVKPRRRWLWPAVGAVVLLAALGGAGTWWFTTGQPERE-----LAEAISAYQRGSREVA 213
Query: 73 RSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATL 131
R++F ++ + PL +YI I GD A V + +A R A++
Sbjct: 214 RTAFARLAMEHPDDARPL--IYIGRITREDGDLARARTFLTNAVRLAPESAVAARELASI 271
Query: 132 QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ E I++ + +P + A LG + ++ G+ +A +
Sbjct: 272 -----MLADGQPE-IARRFYVRALQLDPGDRIAQGFLGCALVRLGRFDEALRWIQR 321
>gi|332284652|ref|YP_004416563.1| hypothetical protein PT7_1399 [Pusillimonas sp. T7-7]
gi|330428605|gb|AEC19939.1| hypothetical protein PT7_1399 [Pusillimonas sp. T7-7]
Length = 211
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 11/154 (7%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-----DNKLYN 88
L W +G + +ALE + DD+ + + Y
Sbjct: 35 GLVGWRGWQWYQGHTASQAMG--YYEALEGAARQQGDDSLARVKAASKTLRDDFSKSGYT 92
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
P + A +L + D A E + N+ P + A L+ A +L++ Y+ +
Sbjct: 93 PRGVLIAAQVLQERNDLDGAREQLEWLVNNSPDPSLI-PLAKLRLAGVLLEQKQYD---Q 148
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
L +++ + G L GK +AK
Sbjct: 149 ALAQIANAPPAFAGLYADRQGDILLAQGKTAEAK 182
>gi|224043138|ref|XP_002196814.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C, member 3, partial
[Taeniopygia guttata]
Length = 487
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 24/163 (14%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ G+ V + +L + +L DA S F + D++ Y ++ A++ +A
Sbjct: 9 YQGAECGINAEVEKQLEMGKKLLAAGQLADALSHFHAAIEGDSENY--IAYYRRATVYLA 66
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYA--ATLQAASILVDTSSYEEISKILQKL--SEPS 157
G +K A KV + A LQ +L+ ++E + + S PS
Sbjct: 67 MGKSKAAIRDLSKVV------ELKQDFTSARLQRGQLLLKQGKFDEAEDDFKNVLKSNPS 120
Query: 158 NPMHQFANEIL------------GISALKFGKVQKAKTIFEEL 188
N + A L +SA + A ++ +E+
Sbjct: 121 NNEEKEAQTQLTKSDELQRLHSQALSAYQQEDYGAAISLLDEI 163
>gi|149176357|ref|ZP_01854971.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797]
gi|148844709|gb|EDL59058.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797]
Length = 1027
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 6/172 (3%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
H K F A + + D+A F+ I Q N + M +A+ L +G
Sbjct: 179 RHPKGAMAEDAQFGLASSYLRNKQSDEAEKRFKAIAGQKNHSRGSDAQMSLATSLFDRGQ 238
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFA 164
++AA+ FL++ + A L A D Y + + +++ A
Sbjct: 239 YQSAADAFLELPEKFPE-SPLGITARLNAGYAYYDLKQYAKAIQQFDLVTKDPK---HAA 294
Query: 165 NEIL--GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
N + G+S ++ A T FE K SP + + + ++ S +
Sbjct: 295 NALYWKGVSLKGEQQLPAAITAFELALKSKPSPQQKESTTYQLADALLRSGK 346
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 12/155 (7%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ Q L N+ +LD A ++K+L Q Y LS + A L
Sbjct: 633 AEAAYMQGRSLENNKQLDAAVDVYQKVLQQFAPSRYAMLSGLQAARTLFQLKKIDEVNLA 692
Query: 112 FLKVA----NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFAN 165
+ + D + A I + + + +I ++L P + + A
Sbjct: 693 YEALLQKFPKVDNLDKILDE-----WALINYEAEQFAKSDEIFRRLITETPDSELADNAR 747
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
L S L GK++ A F EL D S +
Sbjct: 748 LSLAESDLIAGKLEPAAKAFTELQSDPKSDKKVQQ 782
>gi|291286013|ref|YP_003502829.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
gi|290883173|gb|ADD66873.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 533
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 16/139 (11%)
Query: 57 FAQALELF----NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
F + +L + D A +K++ + L+ +A IL G T+ A F
Sbjct: 200 FIASAKLADHYIETGDNDKAIVYLKKVIDASPDM--VLAKFRLAQILSKIGKTEEAEGYF 257
Query: 113 LKV---ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ N+ ++ A + A + + EE ++ + + L
Sbjct: 258 TAILDFLNESEKIYVLKSLANM--AFERNEYAKAEEYFARAFEIDKDIQTAYS-----LA 310
Query: 170 ISALKFGKVQKAKTIFEEL 188
I A G+ AK ++E+
Sbjct: 311 IMAESAGETATAKKWYQEI 329
>gi|322644424|gb|EFY40965.1| hypothetical protein SEEM054_12231 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|323269815|gb|EGA53265.1| hypothetical protein SEEM8287_16694 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 192
Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 3/136 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
K +A +IL + +L W Y E + A+ +++K D ++ EK +
Sbjct: 23 KALAVGVILGVGALVGWRYWSSHQTES-ARAASLAYQNAVTAVSADKPDSIPAA-EKFAA 80
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y L++M +A V K + K A + ++ L+ A + +
Sbjct: 81 ENKNTYGALASMELAQQFVDKNELKKAEAQLQQGVAATS-DENLKAVINLRLARVQLQLK 139
Query: 142 SYEEISKILQKLSEPS 157
+ K L +
Sbjct: 140 QADAALKTLDAVKGEG 155
>gi|299530504|ref|ZP_07043924.1| hypothetical protein CTS44_06983 [Comamonas testosteroni S44]
gi|298721480|gb|EFI62417.1| hypothetical protein CTS44_06983 [Comamonas testosteroni S44]
Length = 225
Score = 40.4 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 12/185 (6%)
Query: 9 SYKGKCKMGKCCY----KWIAPLLILMILSLAIW--FYLFDGSHEKKKNIVGENFAQALE 62
+ + + K + I +L+++ L LA W + + + + + +AL
Sbjct: 8 EEQEQIEQLKHFWNSWGTLITSVLVVVFLGLAGWNGWQYWQKRQATQASALEFAVDEALT 67
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++ + D A S + + M AS+ K D A ++ D+
Sbjct: 68 AKDAARADQAFSELRDKYAGTAQAAQTALLMAKASVDAGKLDDAKAQLSWVAEKGDES-- 125
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A ++ +S+L SY+E K+L+ S Q G + GK +A
Sbjct: 126 --FKALARIRLSSVLEQQKSYDEGLKVLEAAMPESYAGLQADRR--GDLYVALGKQAEAV 181
Query: 183 TIFEE 187
++
Sbjct: 182 AQYQA 186
>gi|183599250|ref|ZP_02960743.1| hypothetical protein PROSTU_02709 [Providencia stuartii ATCC 25827]
gi|188021480|gb|EDU59520.1| hypothetical protein PROSTU_02709 [Providencia stuartii ATCC 25827]
Length = 389
Score = 40.4 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 27 LLILMILSLAIWFYLF----DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
L +L+ ++ A +Y+ ++ N + ++ + SN+ D A F +L +
Sbjct: 5 LFLLLPVAAAYGWYMGRRSAQQDKQQHANRLSRDYVTGVNFLLSNQQDKAVDLFLDMLKE 64
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
D+ + +++ + ++ ++G+ + A I + R AT Q +
Sbjct: 65 DSSAFE--AHLTLGNLFRSRGEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMAAGV 122
Query: 143 YEEISKILQKLSEPSNPMHQFANEIL 168
Y+ + Q+L++ + Q A + L
Sbjct: 123 YDRAENMFQQLTDEVD-FKQSALQSL 147
>gi|193210571|ref|NP_001123163.1| hypothetical protein K09A9.6 [Caenorhabditis elegans]
gi|158936276|emb|CAP16280.1| C. elegans protein K09A9.6b, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 920
Score = 40.4 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILS---QDNKLYNPLSNMY--IASILVAKGDTKNAA 109
+ +A L ++ ++A F+ +++ + Y + Y I + D A
Sbjct: 501 DILDRADNLVEKHQYEEAMELFDHVIAVYPASTRAYFGKARAYDIRGEIEADETDRDKAI 560
Query: 110 EIFLKVANDDLAPLAVRYAATLQ 132
EI+ K+ + P A+ A +
Sbjct: 561 EIYEKILQNSGVPDALFRQAAQR 583
>gi|331082703|ref|ZP_08331826.1| hypothetical protein HMPREF0992_00750 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400322|gb|EGG79964.1| hypothetical protein HMPREF0992_00750 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 497
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 33/178 (18%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+K EN +A + D A ++ E + ++ LS
Sbjct: 322 QEAGEKAAAYENLIKAWQAHQEGNSDTAANAIEGVNAE------LLS------------- 362
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE----PSNPM 160
A ++ + VR + AS +++ Y+ L+K N M
Sbjct: 363 -VEAKSMYDSIMK--SVGSTVRK-KYVNEASAALESGDYDTAIAGLEKALNIGKQDKNTM 418
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
Q A + K G + A ++++ D ++ ++ L SDQ +
Sbjct: 419 FQLAQ-----AYDKKGDKENANQWYQKII-DEFPGTKAASDAKDYLEANGGSDQAPAE 470
>gi|116051826|ref|YP_789331.1| hypothetical protein PA14_14900 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115587047|gb|ABJ13062.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 214
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 6/165 (3%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L + ++ W + + + AL K+ S+
Sbjct: 28 GILALAVVFGWQAWQKYQTNQAQGASIVYQQLIETALNPAGQPDPAKVAELAGKLKSEFG 87
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +A V D A + A + A +L
Sbjct: 88 GTHYAQYGSLFVAKVAVDSGKLDDAVAELKAVM-DKPADATLGELARQRLARVLAAQGK- 145
Query: 144 EEISKILQKLSEPSNPMHQFANEIL-GISALKFGKVQKAKTIFEE 187
+ + L+ L ++ + E L G ++ + +A+ +E+
Sbjct: 146 --VEEGLKLLDGDADKAYVSTREELKGDLLVQLKRTDEARAAYEK 188
>gi|296120871|ref|YP_003628649.1| RNA polymerase subunit alpha domain protein [Planctomyces
limnophilus DSM 3776]
gi|296013211|gb|ADG66450.1| RNA polymerase alpha subunit domain protein [Planctomyces
limnophilus DSM 3776]
Length = 451
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 15/151 (9%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPLA 124
+ +LD+A + + ++ + + + IL +GDT A E F V D A
Sbjct: 134 AGQLDEAEKAVRQSGTEGAR--RAEYSYQMGCILSDRGDTYGAIEYFERAVDMDPHHSQA 191
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ A A DT + L + + P H A LG+ G A
Sbjct: 192 LFRLAEQNALYGN-DTEAI-----RLYEQALSRPPYHLSAMLNLGLLYEDRGNYASAAFC 245
Query: 185 FEEL-AKDNNSPFGISTRSQMILANIIASDQ 214
F + A D N R++M + +I A+ +
Sbjct: 246 FRRILAFDPN-----HVRARMYMKDIEATQE 271
>gi|221066036|ref|ZP_03542141.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
gi|220711059|gb|EED66427.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
Length = 225
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 10/149 (6%)
Query: 9 SYKGKCKMGKCCY----KWIAPLLILMILSLAIW--FYLFDGSHEKKKNIVGENFAQALE 62
+ + + K + I +L+++ L LA W + + + + + +AL
Sbjct: 8 EEQEQIEQLKHFWNSWGTLITSVLVVVFLGLAGWNGWQYWQKRQATQASALEFAVDEALT 67
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
++ + D A + + +A V G +A VA +
Sbjct: 68 AKDAARADQAFGELRD--KYAGTAQAAQTALLMAKASVDAGKFDDAKAQLSWVA--EKGD 123
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQ 151
+ A ++ +S+L SY+E K+L+
Sbjct: 124 EGFKALARIRLSSVLEQQKSYDEGLKVLE 152
>gi|49078144|gb|AAT49755.1| PA3801 [synthetic construct]
Length = 215
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 6/165 (3%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L + ++ W + + + AL K+ S+
Sbjct: 28 GILALAVVFGWQAWQKYQTNQAQGASIVYQQLIETALNPAGQPDPAKVAELAGKLKSEFG 87
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +A V D A + A + A +L
Sbjct: 88 GTHYAQYGSLFVAKVAVDSGKLDDAVAELKAVM-DKPADATLGELARQRLARVLAAQGK- 145
Query: 144 EEISKILQKLSEPSNPMHQFANEIL-GISALKFGKVQKAKTIFEE 187
+ + L+ L ++ + E L G ++ + +A+ +E+
Sbjct: 146 --VEEGLKLLDGDADKAYVSTREELRGDLLVQLKRTDEARAAYEK 188
>gi|329999181|ref|ZP_08303373.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
gi|328538373|gb|EGF64503.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
Length = 1350
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 51/162 (31%), Gaps = 18/162 (11%)
Query: 63 LFNSNKLDDARSSFE--------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
L NK +A++ + K+ + + A V+ G+ A +
Sbjct: 429 LREQNKSAEAQAMLQTLPQSLRQKLQPRVVAGMPGDALRRQAQAQVSSGNPAGAIATLRE 488
Query: 115 VANDDLAPLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+R A +L + + E S ++ P A + A
Sbjct: 489 GVARYPDDPWLRLDLAR-----LLQKSGNGSEASSLMSAAYRPGAS--NSALYAAALFAS 541
Query: 174 KFGKVQKAKTIFEELAKDNNSP--FGISTRSQMILANIIASD 213
+ G Q+A+T+ + + + + R L + A +
Sbjct: 542 ENGAWQQAQTLLARIPGGSQTSDMRDLRQRVNYNLQLVTAEN 583
>gi|75675157|ref|YP_317578.1| TPR and WD-40 repeat-containing protein [Nitrobacter winogradskyi
Nb-255]
gi|74420027|gb|ABA04226.1| TPR repeat and WD-40 repeat protein [Nitrobacter winogradskyi
Nb-255]
Length = 506
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ + +A +L K+D A ++ +IL D + L +L +GD A +
Sbjct: 360 AIADALKEATDLHQEGKIDQAARAYRQILETDPRNEGALHRYGQ--LLARRGDHVAAKRM 417
Query: 112 F 112
F
Sbjct: 418 F 418
>gi|20090471|ref|NP_616546.1| TPR domain-containing protein [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ S + ++L L + +A S F+++L+ D L+++ A K
Sbjct: 1017 ENSERNPDEAQDIMYKKSLSLLRLGRYAEAESGFKEVLALDPANTEALAHLSTACF--KK 1074
Query: 103 GDTKNAAEIFLKVANDDLAPLAV--RYAATLQAASILVDTSSYEEISKILQK 152
G K A EIF +V + + A + R L+A ++ ++ L+
Sbjct: 1075 GHYKEALEIFERVLSQNPARKTILFRKGLALKAFGKNLEALEAFDLVLKLKP 1126
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 10/147 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ A L N++ ++ F++IL + Y+ ++ +A ++ + + A + F V
Sbjct: 1700 YNAATTLIKLNRIQESLGYFDRILEISPENYDAMNYKGVAFCMLEQ--YREALKSFDNVL 1757
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D AV + L +T+ K + NP H+ + LG+S K
Sbjct: 1758 KKDPNNIKAVYNVGVVCFKQKLYETA------ARAFKEALTINPWHEPSLRYLGLSLAKT 1811
Query: 176 GKVQKAKTIFEELAK-DNNSPFGISTR 201
G + A FE+L + P ++ R
Sbjct: 1812 GDYEDALKAFEKLLRIKPQDPQAMNYR 1838
>gi|77362055|ref|YP_341629.1| TPR-like domain-containing protein [Pseudoalteromonas haloplanktis
TAC125]
gi|76876966|emb|CAI89183.1| puttive membrane-associated protein with TPR-like domain
[Pseudoalteromonas haloplanktis TAC125]
Length = 206
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 62/190 (32%), Gaps = 5/190 (2%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN 67
++ + + + K ++ L L ++ Y + ++ + + L +
Sbjct: 5 STEEQQAEAIKRFFRENGLSLALGVIVGLGGLYGWKAYNQNQITTAEQASDAYTTLVSGE 64
Query: 68 KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
+ + +F I + Y L+ A V D A+E + ++ ++
Sbjct: 65 SVLSSADTF--ISENKDTNYATLAAFVAAKDAVEANDLDAASEKLSWIVSNVKNDE-LKA 121
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
A + A + + Y+E L + + E+ G K G ++A+ ++
Sbjct: 122 IAITRLARVQIAQQQYDEALTSLN--ASLPDAFSANVAELKGDIYTKQGDKKQARAAYQA 179
Query: 188 LAKDNNSPFG 197
Sbjct: 180 AVDAGGLTSN 189
>gi|150008026|ref|YP_001302769.1| putative N-acetylglucosamine transferase [Parabacteroides
distasonis ATCC 8503]
gi|149936450|gb|ABR43147.1| putative N-acetylglucosamine transferase [Parabacteroides
distasonis ATCC 8503]
Length = 485
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 15/142 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYN---PLSNMYIASILVAKGDTKNAAEIFL-KVAND 118
L + A +++ ++ Y L ++ GD + A E F + D
Sbjct: 172 LETEGDVPRAIKLCNELIDKNPFSYEYWFTLGRLHSMV-----GDYEKAIEAFDFALTCD 226
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D + A L SYE+ + Q++ M + + ++ +K +
Sbjct: 227 DSDTEL-----KILKAYCLYMNESYEKAIEEYQEIEGDEEVMRRIS-PLMAECYMKLEQY 280
Query: 179 QKAKTIFEELAKDNNSPFGIST 200
+KA + + D + G +
Sbjct: 281 EKAYQLLSTIINDPDMEDGPTN 302
>gi|148554302|ref|YP_001261884.1| hypothetical protein Swit_1382 [Sphingomonas wittichii RW1]
gi|148499492|gb|ABQ67746.1| hypothetical protein Swit_1382 [Sphingomonas wittichii RW1]
Length = 442
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 5/106 (4%)
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
A L +G A ++ + YA L AA D+ E Q++
Sbjct: 33 ALALQQQGKAAQAYDMLAPLVATRAGDPDYDYALGLAAA----DSGRAGEAILAFQRVLS 88
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
P + A L + G V A+ F + +D P + R
Sbjct: 89 -VQPGNSQARAELARAYALGGDVDTARAQFNTVVQDPTLPDPVRQR 133
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 50 KNIVGE---NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
G+ ++A L +S + +A +F+++LS + +A GD
Sbjct: 54 ATRAGDPDYDYALGLAAADSGRAGEAILAFQRVLSVQPGN--SQARAELARAYALGGDVD 111
Query: 107 NAAEIFLKVANDDLAPLAVR 126
A F V D P VR
Sbjct: 112 TARAQFNTVVQDPTLPDPVR 131
>gi|15598996|ref|NP_252490.1| hypothetical protein PA3801 [Pseudomonas aeruginosa PAO1]
gi|218889915|ref|YP_002438779.1| hypothetical protein PLES_11731 [Pseudomonas aeruginosa LESB58]
gi|254236705|ref|ZP_04930028.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254242492|ref|ZP_04935814.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|9949974|gb|AAG07188.1|AE004798_11 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126168636|gb|EAZ54147.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126195870|gb|EAZ59933.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218770138|emb|CAW25900.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
Length = 214
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 6/165 (3%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L + ++ W + + + AL K+ S+
Sbjct: 28 GILALAVVFGWQAWQKYQTNQAQGASIVYQQLIETALNPAGQPDPAKVAELAGKLKSEFG 87
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V G +A V D A + A + A +L
Sbjct: 88 GTHYAQYGSLFVAKVAVDSGKLDDAVAELKAVM-DKPADATLGELARQRLARVLAAQGK- 145
Query: 144 EEISKILQKLSEPSNPMHQFANEIL-GISALKFGKVQKAKTIFEE 187
+ + L+ L ++ + E L G ++ + +A+ +E+
Sbjct: 146 --VEEGLKLLDGDADKAYVSTREELRGDLLVQLKRTDEARAAYEK 188
>gi|327284914|ref|XP_003227180.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Anolis carolinensis]
Length = 779
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 28/112 (25%), Gaps = 9/112 (8%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+ E A E F + A L++ + L + L G
Sbjct: 7 AQPQPCAEMLQVAEEAFRGGQFALAAEILSSQLAELPQPERGLC-LRRGDALARAGRVAE 65
Query: 108 AAEIFLKVANDDLA-PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
A E + A P +R A A + L L P
Sbjct: 66 ALEAYSAAARQARLRPEELRQLAEGLA-------LTLRHKELRLPPLPGPGR 110
>gi|315123114|ref|YP_004065120.1| TPR-like domain-containing protein [Pseudoalteromonas sp. SM9913]
gi|315016874|gb|ADT70211.1| TPR-like domain-containing protein [Pseudoalteromonas sp. SM9913]
Length = 206
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 55/172 (31%), Gaps = 8/172 (4%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L +++ L + ++ + + + + +E + DA I +
Sbjct: 26 ALGVIVGLGGLYGWKAYNQNQITTAEQASDAYTKLVESDDVLASADAF-----ISENKDT 80
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
Y L+ A V A E + + ++ ++ AT + A + + Y++
Sbjct: 81 QYATLAAFVAAKEAVDAQKLDVANEKLSWIVS-NVDNAQLKAIATTRLARVQIAQQQYDD 139
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
L S + E+ G + G ++A+ ++
Sbjct: 140 ALTTLN--SPLPEAFNANIAELKGDIYTQQGNKEQARVAYQAAVDAGGLTSN 189
>gi|58332818|ref|NP_001011485.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Xenopus (Silurana)
tropicalis]
gi|57033104|gb|AAH88814.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Xenopus (Silurana)
tropicalis]
Length = 437
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + +L DA S F + D Y ++ A++ +A G +K A KV
Sbjct: 46 KLLAAGQLADALSHFHSAIDGDPDNY--VAYYRRATVYLAMGKSKAAIPDLSKVIELKPD 103
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI-------------- 167
+ A +Q +L+ +E + +K+ + SNP Q E
Sbjct: 104 FTS----ARVQRGHLLLKQGKLDEAEEDFKKVLK-SNPNEQEEKEANAQLLKSSEIQSMR 158
Query: 168 -LGISALKFGKVQKAKTIFEELAK 190
GI+A K G A+T + +
Sbjct: 159 SQGIAAYKEGDYSTAETYLNFVLE 182
>gi|225418703|ref|ZP_03761892.1| hypothetical protein CLOSTASPAR_05927 [Clostridium asparagiforme
DSM 15981]
gi|225041758|gb|EEG52004.1| hypothetical protein CLOSTASPAR_05927 [Clostridium asparagiforme
DSM 15981]
Length = 1360
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 15/127 (11%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ E L + +A +++++ Y+ + A I A
Sbjct: 76 SAQAQADALPADETIRIIYGLAARKQTAEAAGMLKQLIADH--GYDTSCALAQARISAAS 133
Query: 103 GDTKNAAEIFLKVAN--DDLAPLAV---------RYAATLQAASILVDTSSYEEISKILQ 151
GD A ++ K DD AP R T+ A + D+S ++
Sbjct: 134 GDFTAARVLYEKAKTVWDDSAPREYNAVTEACASRSVDTVLLAHL--DSSDIADLYPEGV 191
Query: 152 KLSEPSN 158
+ +
Sbjct: 192 PDTGDTG 198
>gi|184156833|ref|YP_001845172.1| hypothetical protein ACICU_00513 [Acinetobacter baumannii ACICU]
gi|213155965|ref|YP_002318010.1| hypothetical protein AB57_0606 [Acinetobacter baumannii AB0057]
gi|215484682|ref|YP_002326917.1| UPF0070 protein [Acinetobacter baumannii AB307-0294]
gi|239500763|ref|ZP_04660073.1| hypothetical protein AbauAB_00480 [Acinetobacter baumannii AB900]
gi|301346484|ref|ZP_07227225.1| hypothetical protein AbauAB0_09569 [Acinetobacter baumannii AB056]
gi|301509974|ref|ZP_07235211.1| hypothetical protein AbauAB05_00312 [Acinetobacter baumannii AB058]
gi|301594211|ref|ZP_07239219.1| hypothetical protein AbauAB059_00330 [Acinetobacter baumannii
AB059]
gi|183208427|gb|ACC55825.1| uncharacterized protein conserved in bacteria [Acinetobacter
baumannii ACICU]
gi|193076312|gb|ABO10957.2| hypothetical protein A1S_0504 [Acinetobacter baumannii ATCC 17978]
gi|213055125|gb|ACJ40027.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
gi|213987482|gb|ACJ57781.1| UPF0070 protein [Acinetobacter baumannii AB307-0294]
gi|322506725|gb|ADX02179.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
gi|323516599|gb|ADX90980.1| hypothetical protein ABTW07_0543 [Acinetobacter baumannii
TCDC-AB0715]
Length = 232
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 69/192 (35%), Gaps = 8/192 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFD---GSHEKKKNIVGENF 57
M +++ K K I+ +LI +I + W Y + + + V +
Sbjct: 1 MSLSDEEQFDSLKSFAKKYGSAMISGILIALI-AFFGWEYWQKRNLATSQTETAKVQQLM 59
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKV 115
+A ++ N L +S +KI+ D + + +A + K D A + KV
Sbjct: 60 DEANATADNPNALASITASADKIVKDDIDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKV 119
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N + + L+ A + + Y+E K L +P E+ G +
Sbjct: 120 ENSKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGDVDP--AFKATVEELRGDIFVAK 177
Query: 176 GKVQKAKTIFEE 187
+ AK ++
Sbjct: 178 KDIDSAKKAYQA 189
>gi|187251318|ref|YP_001875800.1| hypothetical protein Emin_0908 [Elusimicrobium minutum Pei191]
gi|186971478|gb|ACC98463.1| hypothetical protein Emin_0908 [Elusimicrobium minutum Pei191]
Length = 209
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 10/172 (5%)
Query: 19 CCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEK 78
++ I +L+I+ F+ ++ K K + A+ L + K
Sbjct: 24 QAHRTIIIAGVLIIVIFIGGFFAYEYRQSKIKEDSWKELTMAILFGEPENLTAVTEKYPK 83
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+ Y Y+ +G+ A ++ KVA + + + A + A+
Sbjct: 84 TNAALYAAY------YMGDYNYEQGNYPEAVSLYKKVA--EGKNKELAHVAQISLAAAYQ 135
Query: 139 DTSSYEEISKILQKLSEPSNPMHQFANEIL--GISALKFGKVQKAKTIFEEL 188
YE + + + A L +S GK + A ++ +
Sbjct: 136 ANKDYEASILTAEDFINKNPQHYAIAQVYLTKALSQELAGKKEAAAADYKII 187
>gi|193210573|ref|NP_001123164.1| hypothetical protein K09A9.6 [Caenorhabditis elegans]
gi|158936277|emb|CAP16281.1| C. elegans protein K09A9.6c, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 881
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILS---QDNKLYNPLSNMY--IASILVAKGDTKNAA 109
+ +A L ++ ++A F+ +++ + Y + Y I + D A
Sbjct: 462 DILDRADNLVEKHQYEEAMELFDHVIAVYPASTRAYFGKARAYDIRGEIEADETDRDKAI 521
Query: 110 EIFLKVANDDLAPLAVRYAATLQ 132
EI+ K+ + P A+ A +
Sbjct: 522 EIYEKILQNSGVPDALFRQAAQR 544
>gi|315634579|ref|ZP_07889863.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315476527|gb|EFU67275.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 183
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
++ + F+QA +L+ KLD+A F+ I +D+ + + +A I KG+ + A
Sbjct: 3 QDEARQLFSQAKKLYQDEKLDEAIDIFQSIKREDSPETFARAQLNLALIWRKKGEQEKAI 62
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-SEPSNPMHQFANEIL 168
I+ + +D P A A A I + ++++ + + E A L
Sbjct: 63 AIYETIQREDN-PKAFAK-AQYNLALIWAEKDDHKKVVSAYKAIQREDDKEAFAKAQFNL 120
Query: 169 GISALKFGKVQKAKTIFEELAKDNN 193
G+ + G+ +KA + +E + + ++
Sbjct: 121 GVIWDEKGEQEKAISAYEAIQQQDD 145
>gi|303247062|ref|ZP_07333337.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
gi|302491488|gb|EFL51373.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
Length = 220
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
Y G+++K + EN A+ S + S+ E + N+ IA
Sbjct: 42 GGYALYGTYQKSQIAKAENELGAIVTAKSG--AERLSALEALAKTAPAGARDGINLEIAK 99
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
GD AA + V+ AP ++ ATL A+ L + + L+ LS +
Sbjct: 100 TAQDLGDYAKAAAAWQTVS--QNAPAGMKTVATLGYAATLSKAGQNAKAVEALENLSVTA 157
Query: 158 -NPMHQFANEILGISALKFGKVQKAKTIFEEL 188
++ L ++A G+ QKA + +E L
Sbjct: 158 PKAFTSTVDQQLAVTAEAAGQWQKAVSAYERL 189
>gi|301309888|ref|ZP_07215827.1| putative tetratricopeptide repeat protein [Bacteroides sp. 20_3]
gi|300831462|gb|EFK62093.1| putative tetratricopeptide repeat protein [Bacteroides sp. 20_3]
Length = 485
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 15/142 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYN---PLSNMYIASILVAKGDTKNAAEIFL-KVAND 118
L + A +++ ++ Y L ++ GD + A E F + D
Sbjct: 172 LETEGDVPRAIELCNELIDKNPFSYEYWFTLGRLHSMV-----GDYEKAIEAFDFALTCD 226
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D + A L SYE+ + Q++ M + + ++ +K +
Sbjct: 227 DSDTEL-----KILKAYCLYMNESYEKAIEEYQEIEGDEEVMRRIS-PLMAECYMKLEQY 280
Query: 179 QKAKTIFEELAKDNNSPFGIST 200
+KA + + D + G +
Sbjct: 281 EKAYQLLSTIINDPDMEDGPTN 302
>gi|298376624|ref|ZP_06986579.1| tetratricopeptide repeat containing protein [Bacteroides sp.
3_1_19]
gi|298266502|gb|EFI08160.1| tetratricopeptide repeat containing protein [Bacteroides sp.
3_1_19]
Length = 485
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 15/142 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYN---PLSNMYIASILVAKGDTKNAAEIFL-KVAND 118
L + A +++ ++ Y L ++ GD + A E F + D
Sbjct: 172 LETEGDVPRAIELCNELIDKNPFSYEYWFTLGRLHSMV-----GDYEKAIEAFDFALTCD 226
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D + A L SYE+ + Q++ M + + ++ +K +
Sbjct: 227 DSDTEL-----KILKAYCLYMNESYEKAIEEYQEIEGDEEVMRRIS-PLMAECYMKLEQY 280
Query: 179 QKAKTIFEELAKDNNSPFGIST 200
+KA + + D + G +
Sbjct: 281 EKAYQLLSTIINDPDMEDGPTN 302
>gi|262381405|ref|ZP_06074543.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262296582|gb|EEY84512.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 485
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 15/142 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYN---PLSNMYIASILVAKGDTKNAAEIFL-KVAND 118
L + A +++ ++ Y L ++ GD + A E F + D
Sbjct: 172 LETEGDVPRAIELCNELIDKNPFSYEYWFTLGRLHSMV-----GDYEKAIEAFDFALTCD 226
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D + A L SYE+ + Q++ M + + ++ +K +
Sbjct: 227 DSDTEL-----KILKAYCLYMNESYEKAIEEYQEIEGDEEVMRRIS-PLMAECYMKLEQY 280
Query: 179 QKAKTIFEELAKDNNSPFGIST 200
+KA + + D + G +
Sbjct: 281 EKAYQLLSTIINDPDMEDGPTN 302
>gi|227328674|ref|ZP_03832698.1| hypothetical protein PcarcW_15586 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 206
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 55/149 (36%), Gaps = 4/149 (2%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ + ++ Q E K DA ++ EK +++ Y L+++ +A
Sbjct: 39 WRFWQSHQNDSVMAASASYQQVTEQLAEGK-ADAITATEKFTAENKNTYGALASLELARH 97
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V + D AA+ ++ + + L+ A + + + ++ K L +
Sbjct: 98 YVDQKDFAKAAQQLVQAQSQTK-DADLLAVVNLRLARVQLQENKADDALKTLDAIKLEG- 155
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEE 187
A E+ G + G Q A+ + +
Sbjct: 156 -WASQAAEVRGDILVSKGDNQAARDAYNK 183
>gi|152972399|ref|YP_001337545.1| putative cellulose synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150957248|gb|ABR79278.1| putative cellulose synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 1342
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 51/162 (31%), Gaps = 18/162 (11%)
Query: 63 LFNSNKLDDARSSFE--------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
L NK +A++ + K+ + + A V+ G+ A +
Sbjct: 421 LREQNKSAEAQAMLQTLPQSLRQKLQPRVVAGMPGDALRRQAQAQVSSGNPAGAIATLRE 480
Query: 115 VANDDLAPLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+R A +L + + E S ++ P A + A
Sbjct: 481 GVARYPDDPWLRLDLAR-----LLQKSGNGSEASSLMSAAYRPGAS--NSALYAAALFAS 533
Query: 174 KFGKVQKAKTIFEELAKDNNSP--FGISTRSQMILANIIASD 213
+ G Q+A+T+ + + + + R L + A +
Sbjct: 534 ENGAWQQAQTLLARIPGGSQTSDMRDLRQRVNYNLQLVTAEN 575
>gi|284053589|ref|ZP_06383799.1| TPR domain-containing protein [Arthrospira platensis str. Paraca]
gi|291567291|dbj|BAI89563.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1020
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 11/136 (8%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKV 115
F Q L +L A + F+K + + +N+ ++L + A + +
Sbjct: 425 FEQGQALKKQGQLAGAETCFKKAILANPNYIPAHNNL--GTLLQQQQRYNEAIICYQNTL 482
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEI-SKILQKLSEPSNPMHQFANEILGISALK 174
+ P + ++ +L D E K ++ NP A LG+ +
Sbjct: 483 KLNPNLPETLANLCSI---YLLQDQLQPAEAGLKRALEM----NPQCVPALYNLGLLYKQ 535
Query: 175 FGKVQKAKTIFEELAK 190
K++ A +F+ A
Sbjct: 536 QAKLEAAIKLFQAAAS 551
>gi|71736366|ref|YP_276627.1| thioredoxin [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556919|gb|AAZ36130.1| thioredoxin, putative [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320322805|gb|EFW78898.1| thioredoxin [Pseudomonas syringae pv. glycinea str. B076]
gi|320330409|gb|EFW86388.1| thioredoxin [Pseudomonas syringae pv. glycinea str. race 4]
Length = 290
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA ELF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 SAADPLKQAQELFAESRFAEAEALLKALLGEDNTNAAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + + +HQ A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDVAELKSRLAQNPQDDEAVHQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|89271328|emb|CAJ82984.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Xenopus (Silurana)
tropicalis]
Length = 504
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + +L DA S F + D Y ++ A++ +A G +K A KV
Sbjct: 46 KLLAAGQLADALSHFHSAIDGDPDNY--VAYYRRATVYLAMGKSKAAIPDLSKVIELKPD 103
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI-------------- 167
+ A +Q +L+ +E + +K+ + SNP Q E
Sbjct: 104 FTS----ARVQRGHLLLKQGKLDEAEEDFKKVLK-SNPNEQEEKEANAQLLKSSEIQSMR 158
Query: 168 -LGISALKFGKVQKAKTIFEELAK 190
GI+A K G A+T + +
Sbjct: 159 SQGIAAYKEGDYSTAETYLNFVLE 182
>gi|332305586|ref|YP_004433437.1| hypothetical protein Glaag_1208 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172915|gb|AEE22169.1| Protein of unknown function DUF2133 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 207
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 52/177 (29%), Gaps = 8/177 (4%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE-NFAQALEL 63
+ K + I +L + L W Y D K+ A L
Sbjct: 7 EEQQVEAIKRFWKENGTAIIVG-AVLGLGGLWGWRYYNDEQIAAKEQASAAFESQTAALL 65
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
A+ + I + Y L +A + + D A + + A +
Sbjct: 66 AEDANFGQAK---QYIDENSDTGYALLMAFQLAQQAIDRKDLSEAEKQL-EFAAANSQNE 121
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
AV A L+ A + + E+ + ++ + EI G +K K
Sbjct: 122 AVNALANLRLARVQLALEQPEKALASAENIT--TAAFSAQQQEIKGDIYVKQEMFDK 176
>gi|78484418|ref|YP_390343.1| TPR repeat-containing protein [Thiomicrospira crunogena XCL-2]
gi|78362704|gb|ABB40669.1| Conserved hypothetical protein; predicted membrane protein with a
TPR repeat domain [Thiomicrospira crunogena XCL-2]
Length = 664
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 11/86 (12%)
Query: 39 FYLFDGSHEKKKNIVGENFAQAL----ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY 94
++ ++ + F L L+ K +A F + YN
Sbjct: 380 QQGYEKWQQQDYQTAADRFEDPLWKGASLYRQGKYKEAIKQF-SLDKSAKGRYN------ 432
Query: 95 IASILVAKGDTKNAAEIFLKVANDDL 120
+ L +GD K A E + K D
Sbjct: 433 QGNALAKQGDFKAAKEQYQKALKQDP 458
>gi|254514001|ref|ZP_05126062.1| Tetratricopeptide repeat family protein [gamma proteobacterium
NOR5-3]
gi|219676244|gb|EED32609.1| Tetratricopeptide repeat family protein [gamma proteobacterium
NOR5-3]
Length = 222
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 27/216 (12%), Positives = 74/216 (34%), Gaps = 8/216 (3%)
Query: 5 NDANSYKGKCKMGKCCYK---WIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
S + + + K +K + I + L L + + + + + Q L
Sbjct: 2 ESYRSEEEQVEALKRWWKENGRSTLIGIALALGLGFGWQAWQKTQQLAAENASNLYQQML 61
Query: 62 ELFNSNKLDDAR--SSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
++ ++ L + ++ Y + M++A + V G + A + +
Sbjct: 62 QVLSTQDEQAGTVGRQLATQLKEQHRGTVYAQFAAMHLARLAVNDGQLQAAEQELRWTLS 121
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA-LKFG 176
++ A L+ A +L +E +LQ + + A + +S L+
Sbjct: 122 MASGNDDIQQVAQLRLARVLASLEKPDEALDLLQGANPDYQASYAIARGDIFLSQGLEAE 181
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
++ + + P + + + + A + ++
Sbjct: 182 AFAAYESALATMEEGAPVPQTLQDKLEFLGARLQSA 217
>gi|223940440|ref|ZP_03632292.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
gi|223890885|gb|EEF57394.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
Length = 803
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F+ A L KLD+A + F + + Y L + A I V + A +
Sbjct: 643 FSLAATLELQGKLDEAAAHFSQAVRLAPTDYEALRRL--AGIFVRQRQFGPAIQNLRYAE 700
Query: 117 N-DDLAPLAVRYAATLQAA--SILVDTSSYE-EISKILQKLSEPSNPMHQFANEILGISA 172
+P + A+L A+ + ++++ +LS+ S IL ++
Sbjct: 701 KLQPDSPKILANLASLLASCPQPELRNGPEALQLAQKAYELSDKSLTFLS----ILDVAY 756
Query: 173 LKFGKVQKAKTIFEELAKDNNS 194
+ G+ A +++ + +
Sbjct: 757 ARIGQFDDAIKTAQKVQEQAVA 778
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 62/189 (32%), Gaps = 30/189 (15%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN---------------KL 69
A +LIL+ + L + F L++ N +
Sbjct: 397 AAVLILISCGVLTASQLQIWQNSVTL------FKHTLDVTRDNVIARENLGFAYHELKQY 450
Query: 70 DDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
D+A + F L + P + + + + KGD + A E F + P
Sbjct: 451 DEAFNEFSAALKINPN--EPHALLGMGMLCSDKGDYQKAIEYFNAALK-NKIPRY--AVT 505
Query: 130 TLQAASILVDTSS-YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF-EE 187
L + L D E + + L P AN LG+ K ++A + F E
Sbjct: 506 RLLLGNALFDQGKLPEAADQYREALRVE--PDLLDANHRLGLVLFKLNLTREAISYFNAE 563
Query: 188 LAKDNNSPF 196
L +++ P
Sbjct: 564 LRVESDLPD 572
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L +A+ F++I+ L++ +A+ L +G AA F +
Sbjct: 615 LAQQGNTSEAQRHFQRIVELQPTN--ELAHFSLAATLELQGKLDEAAAHFSQAVRLAPTD 672
Query: 123 -LAVRYAATL 131
A+R A +
Sbjct: 673 YEALRRLAGI 682
>gi|170702837|ref|ZP_02893686.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10]
gi|170132255|gb|EDT00734.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10]
Length = 209
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 7/199 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESVKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + Y ++ + A L A GD A + A D
Sbjct: 63 AAANDKATMARAAADMEDKFARTPYAQMTALSAAKTLYAAGDAAGAKAQL-QWAVDHARD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + ++ G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGVVSDRRGDLLAAQGKTDDAR 179
Query: 183 TIFEELAKDNNSPFGISTR 201
+ +LA D S S R
Sbjct: 180 AAY-KLALDGLSQNDQSAR 197
>gi|224071273|ref|XP_002303385.1| predicted protein [Populus trichocarpa]
gi|222840817|gb|EEE78364.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 9/133 (6%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-K 114
++ + N K A S F++IL +D Y + + + K + +A F
Sbjct: 350 RLSRGIAQVNEGKYATAISIFDQILKEDPT-YPE-ALIGRGTARAFKRELGSAIADFSKA 407
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+ ++ A A + +AA + + +++K L+ ++ +H+ GI + K
Sbjct: 408 IESNPSAGEAWKRRGQARAA-LGESAEAINDLTKALEFEPNSADILHER-----GIVSYK 461
Query: 175 FGKVQKAKTIFEE 187
F A
Sbjct: 462 FKDFDAAVEDLSA 474
>gi|186476176|ref|YP_001857646.1| hypothetical protein Bphy_1418 [Burkholderia phymatum STM815]
gi|184192635|gb|ACC70600.1| conserved hypothetical protein [Burkholderia phymatum STM815]
Length = 208
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 66/185 (35%), Gaps = 7/185 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + ++L+ L A + ++ + + Q ++
Sbjct: 5 DEQESIESLKAWWAQ--WGNGVTWIVLVALVAAAGWNGWNYWQRHQAAEAAVLYDQVQQV 62
Query: 64 FNSNKLDDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ + + Y ++ + A L A GD A + L+ A D
Sbjct: 63 TAGTDKATITRVSTDMEDKFSGTAYAQMTALAAAKALYAAGDEPGA-KAQLQWAIDHAKD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ L L++PS+ + G GK A+
Sbjct: 122 DEFKQIAKLRLASLLLDEKAYD---AGLALLNDPSDAFKGVVADRRGDLLAAQGKRDDAR 178
Query: 183 TIFEE 187
T ++
Sbjct: 179 TAYKL 183
>gi|120434446|ref|YP_860152.1| TPR repeat-containing protein [Gramella forsetii KT0803]
gi|117576596|emb|CAL65065.1| secreted protein containing tetratricopeptide repeats [Gramella
forsetii KT0803]
Length = 381
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 25/167 (14%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
L IL+IL ++ FY + E+ A L++ K ++A +K + ++
Sbjct: 5 LTILLILGCSLSFYSQE-----------EDIKTADSLYSFGKQNEAIELLQKTEPKTERI 53
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
+ L+ G + A + V N + R + +L+ T + +
Sbjct: 54 HLKLAKFQQ-----ENGQNEEALRHYQSVLNQN----PERVLTAIDYGELLLKTGNLDLA 104
Query: 147 SKILQKLSE--PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+ LSE P N + LG+ K K F+ ++KD
Sbjct: 105 DSLFSDLSEKYPENAGFHY---RLGLVKEKKKDTTAIKYFFKTISKD 148
>gi|114765834|ref|ZP_01444927.1| thioredoxin [Pelagibaca bermudensis HTCC2601]
gi|114541833|gb|EAU44870.1| thioredoxin [Roseovarius sp. HTCC2601]
Length = 305
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 6/133 (4%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
A E+ DA +F IL ++ + A I + + A +
Sbjct: 136 AVDAAEEMLEQGAATDAAQTFAAILEEEPQNARAYGGFVRAHIAMDDLEQAEAV-LNGAP 194
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+P A L+ A D +++ ++ ++P A L +
Sbjct: 195 VEISKSPELEAAHAQLELAKQAADAGPVADLTAAVE-----ADPADHQARFDLAQALYAK 249
Query: 176 GKVQKAKTIFEEL 188
G A EL
Sbjct: 250 GDAAGAVEQLLEL 262
>gi|86359559|ref|YP_471451.1| thioredoxin protein [Rhizobium etli CFN 42]
gi|86283661|gb|ABC92724.1| thioredoxin protein [Rhizobium etli CFN 42]
Length = 324
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 54/160 (33%), Gaps = 10/160 (6%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ + +A E+ + +++A + ++ D + L+ M I +
Sbjct: 148 EAAEIEAVLTEATEMLAAGNINEAAQLYGAVMQADPENAKALAGMAECMIAADQHQRARE 207
Query: 109 --AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
++ ++A D ++ ++ A L + + L +NP H A
Sbjct: 208 TLTDLPEELAKDAGIQAVLKKLDQIEEARKL---GDPVALERELA-----TNPDHHEARL 259
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
L G+ ++A + + + R Q++
Sbjct: 260 KLAKILNVEGRREEAAEHLLLIMRKDRGFDDDGARRQLLQ 299
>gi|15612437|ref|NP_224090.1| hypothetical protein jhp1372 [Helicobacter pylori J99]
gi|4155999|gb|AAD06961.1| putative [Helicobacter pylori J99]
Length = 841
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 9/110 (8%)
Query: 17 GKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSF 76
K Y + LL L+ L +A+ L K+ ++ E N +A
Sbjct: 59 KKKLYIALGILLSLIALIVALSLLLGHKKENKQTSLQTNTATTNNETPNDTNNAEAEGQI 118
Query: 77 EKILSQDNKLYNPL---------SNMYIASILVAKGDTKNAAEIFLKVAN 117
E + D + L + M AS+L +G A +F K+A+
Sbjct: 119 ENLDLPDLIGKDSLKRNDESQVDAMMQKASLLYEQGQKDEALHLFDKIAS 168
>gi|260432326|ref|ZP_05786297.1| thioredoxin [Silicibacter lacuscaerulensis ITI-1157]
gi|260416154|gb|EEX09413.1| thioredoxin [Silicibacter lacuscaerulensis ITI-1157]
Length = 305
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 10/136 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E A E+ DA +F IL +D + A I + D A
Sbjct: 135 EAVEAAEEMLAEGAAVDAAQTFAAILGEDPNHAGAYGGLVRAHIAMGDLDKAEAIL---- 190
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISA 172
+ AP + A L+AA ++ + + + +L + ++P + A L +
Sbjct: 191 ----NGAPAEISTTAELEAAHAQLELAKQAANAGPVAELMAAVEADPDNHQARFDLAQAL 246
Query: 173 LKFGKVQKAKTIFEEL 188
GK +A EL
Sbjct: 247 YANGKAAEAVDHLLEL 262
>gi|223938576|ref|ZP_03630467.1| Tetratricopeptide domain protein [bacterium Ellin514]
gi|223892695|gb|EEF59165.1| Tetratricopeptide domain protein [bacterium Ellin514]
Length = 505
Score = 40.0 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 25/167 (14%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+ ++ D A + F +IL ++ Y+ + +A + KG ++F +
Sbjct: 60 KGMDALQRENFDYAIALFSQILDREPTNYDCRKALRMAQLSKVKGGGGFFKKMFSGASA- 118
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
+P R A + + + +E I Q LS PM+ A++I+ +AL G
Sbjct: 119 --SPQVAR-------AQLALRNNPFEAIGIAEQILSAD--PMNSSAHKIIADAALASGMP 167
Query: 179 QKAKTIFEELAKD-------------NNSPFGISTRSQMILANIIAS 212
+ A + L K + G +R++ +L N+ A
Sbjct: 168 KTAVMSLDLLVKGSPKDKELVIELSHALAEAGERSRAEQVLENLRAV 214
>gi|291278873|ref|YP_003495708.1| hypothetical protein DEFDS_0458 [Deferribacter desulfuricans SSM1]
gi|290753575|dbj|BAI79952.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 530
Score = 40.0 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 74 SSFEKIL-SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132
+ + + N Y L+ +A + KGD + A + V N ++ Q
Sbjct: 179 KGLKDLEQAYKNDKYP-LALYKLADYYLKKGDKEKAVKYLSSVVNKHPEQASL----KFQ 233
Query: 133 AASILVDTSSYEEISKILQKLSEPSNP-MHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ +D Y++ +I ++L + N + A + L +A + F+++ +
Sbjct: 234 LGRLYMDLKEYDKAVEIFEELEKSDNELLKTTAMKQLASIYFDKKVYDRALSYFKKIIE 292
>gi|269926078|ref|YP_003322701.1| TPR repeat-containing protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789738|gb|ACZ41879.1| TPR repeat-containing protein [Thermobaculum terrenum ATCC BAA-798]
Length = 279
Score = 40.0 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+++ +A++L K +A +KIL D + + + + A + G K
Sbjct: 11 QQRREKARLTDRAIDLSEQGKWQEAIEVNQKILEIDPRDVSAHNRIGRAYNEM--GRLKE 68
Query: 108 AAEIFLKVANDDLAPL-AVRYAATLQAASILVDTSSYEEIS 147
A + + + D A A R AA +QA+ +D EEI
Sbjct: 69 ALQAYNETLKIDPANAIAKRNAARIQAS---IDALGQEEIE 106
>gi|254500706|ref|ZP_05112857.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
DFL-11]
gi|222436777|gb|EEE43456.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
DFL-11]
Length = 617
Score = 40.0 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 62/172 (36%), Gaps = 9/172 (5%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ N + + + + L + + + A+ +++ + + + + + G
Sbjct: 4 QTAPNTIRDRLLKGIALQQAGEFEKAQRIYKQAVKKAPNNADAVHLL--GVTYRQLGYPT 61
Query: 107 NAAEIFL-KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
A E +A + + A ++D S + + + NP+ + A
Sbjct: 62 RALEYIQKAIALNPNQSVFYANLAR-----AMMDMGSDVDSLLAVCNKALSLNPLEREAR 116
Query: 166 EILGISALKFGKVQKAKTIFE-ELAKDNNSPFGISTRSQMILANIIASDQRN 216
I GI+ K + ++A+ IF+ + +D +++ A+ N
Sbjct: 117 NIKGIALTKKKEFEEAELIFQSLIVEDPEYKDAYRNFGTLLMDADRANHAVN 168
>gi|209550916|ref|YP_002282833.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209536672|gb|ACI56607.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 622
Score = 40.0 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
+ L L S D A ++FE+ LS D L+ +N + A G+ + + F + A
Sbjct: 412 SHGLALHQSGFDDRAAAAFERALSLDPNLFE--ANFHYARFFFMHGNFAESVQYFTRAAA 469
Query: 118 DDLAP--LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH--QFANEILGISAL 173
+ + ++ ++DT ++ + + + + NP + L ++ +
Sbjct: 470 IRPDDYVSPIHLMSAYRSLGRVLDTENWARLGLLRAERALNLNPENSGPAHRGALALAHM 529
Query: 174 KFGKVQKAKTIFE-ELAKDNN 193
G ++A+ +A D +
Sbjct: 530 --GDTKRARDWAARAIAIDPD 548
>gi|289423663|ref|ZP_06425462.1| SH3 domain protein [Peptostreptococcus anaerobius 653-L]
gi|289155913|gb|EFD04579.1| SH3 domain protein [Peptostreptococcus anaerobius 653-L]
Length = 352
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 22/118 (18%)
Query: 14 CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
K K I ++L++ S + + S EK+ + QALEL + D+A
Sbjct: 72 SKQKKMLAGGIILAILLVVGSFFGFRFYKVYSDEKRAS-------QALEL---GEFDEAE 121
Query: 74 SSFEKI-LSQDNKLYNPL-----------SNMYIASILVAKGDTKNAAEIFLKVANDD 119
+ + + ++ Y L S + A GD A ++ V+++D
Sbjct: 122 NLYSDLYKRTGDQKYKKLRESVLVSKENDSIIVSAKNSADAGDYVEAVRLYASVSSED 179
>gi|302340757|ref|YP_003805963.1| hypothetical protein Spirs_4296 [Spirochaeta smaragdinae DSM 11293]
gi|301637942|gb|ADK83369.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 463
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 9/146 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ L + K ++A +FEK + D + + + +LV+ G T A E
Sbjct: 40 YESISSLLVAGKPEEALEAFEKAYANDPDSFETA--LLRSGLLVSIGKTDEAKEALKTAL 97
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ A A I + +L+ + P H A LG ++
Sbjct: 98 EKEPDNPD----ALFTGALIAGLDGERNQEKALLESV-VEKAPDHGRALAALGELYMEDK 152
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRS 202
+ KA+ FE+ + P R+
Sbjct: 153 EYDKAEDSFEKSIEAE--PDNFVARA 176
>gi|260425610|ref|ZP_05779590.1| thioredoxin [Citreicella sp. SE45]
gi|260423550|gb|EEX16800.1| thioredoxin [Citreicella sp. SE45]
Length = 304
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 46/136 (33%), Gaps = 10/136 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E A A E+ DA +F IL +D A I + D A
Sbjct: 134 EAVAAAEEMLEQGAATDAAQTFAAILEEDPVNAAAYGGFVRAHIAMDDLDQAEAIL---- 189
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISA 172
+ AP+ + +A L+AA + + E + + L+ ++P A L +
Sbjct: 190 ----NGAPMEISKSAELEAAHAQLALARQAENAGPVADLTAQVEADPADHQARFDLAQAL 245
Query: 173 LKFGKVQKAKTIFEEL 188
G A EL
Sbjct: 246 YAKGDAAGAVDQLLEL 261
>gi|115351799|ref|YP_773638.1| hypothetical protein Bamb_1748 [Burkholderia ambifaria AMMD]
gi|115281787|gb|ABI87304.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
Length = 209
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 7/199 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESVKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + Y ++ + A L A GD A + A D
Sbjct: 63 AAANDKATMARAAADMEDKFARTPYAQMTALSAAKTLYAAGDAAGAKAQL-QWAVDHARD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGVVADRRGDLLAAQGKTDDAR 179
Query: 183 TIFEELAKDNNSPFGISTR 201
+ +LA D S S R
Sbjct: 180 AAY-KLALDGLSKDDQSAR 197
>gi|269121571|ref|YP_003309748.1| hypothetical protein Sterm_2974 [Sebaldella termitidis ATCC 33386]
gi|268615449|gb|ACZ09817.1| hypothetical protein Sterm_2974 [Sebaldella termitidis ATCC 33386]
Length = 288
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 15/180 (8%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY 87
+I+++ L D + F A+++ NK+ DA + +K+ + Y
Sbjct: 4 IIVILTILGGMLVFADAKSD---------FEGAIQMIRDNKVTDAVKALDKLSKGRDADY 54
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
SN+ + +++ D + K D +A L+ ++ + ++
Sbjct: 55 ATKSNIVLGDYYLSQNDLVKGESYYKKALGDKSKVNPDTISAALKIGNLYLYQGKNDQAG 114
Query: 148 KILQ--KLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
+ + + + E+LG + K A++ F L ++P I R +I
Sbjct: 115 EYFEWANTATGDKEVRIL--EVLGTYYYRIDKKDLAESKF--LKGAQSAPNDIPIRLTLI 170
>gi|325108079|ref|YP_004269147.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
gi|324968347|gb|ADY59125.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
Length = 693
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 9/152 (5%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ F + +A+ F+K++ QD ++ +A + D A
Sbjct: 60 ASNSSSPFNAGEAALKAGNFREAKKQFQKVVQQDPNN--ATAHHRLAYLADMDKDYSIAE 117
Query: 110 EIFLKVANDDLAPLAVRYAA-TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+L + A L + +L + + S+ + + +P H +A L
Sbjct: 118 IHYLAALRIEPKNA---DIACDLGYSYLLQER---SDDSRRYLEKALRFDPNHHYAKMNL 171
Query: 169 GISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ G A + + + + I+
Sbjct: 172 ATLHSQQGDYAAAMAMLRQAVSEEEAQAHIAQ 203
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 13/154 (8%)
Query: 62 ELFNSNKLDDARSSFEKILSQD--NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
+A F+K+ D Y + M G A EIF + +
Sbjct: 253 AFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEA---YSQGGSPAGALEIFQTMQRNG 309
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
P V + + A YE+ KI + + + +N +L + + G+V+
Sbjct: 310 CFPDTVSHNILINAYGR---AGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVE 366
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
+A+ + + +D P + + A I A
Sbjct: 367 EAEELVSAMERDGTKPDTL-----IYNALINAYG 395
>gi|239787366|emb|CAX83842.1| TPR repeat protein [uncultured bacterium]
Length = 1036
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE-IFL 113
E F +AL+L S +LD A S++E+ +++ L N A +L G + + ++
Sbjct: 17 EAFERALDLQKSGQLDQAASAYEQAMAERPDHVPSLVN--SAVVLRRLGKLEASLRLLYK 74
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ D P + +D + ++ ++ SN + A L ++
Sbjct: 75 ALEIDPRQPGMWQNLGETLRRLKRLDEA-----VGAFKRAAQDSN-ILLAAVSGLALALK 128
Query: 174 KFGKVQKAKTIFEEL 188
+ G++ +A + E L
Sbjct: 129 EAGQLDEALSAMETL 143
>gi|77460820|ref|YP_350327.1| hypothetical protein Pfl01_4599 [Pseudomonas fluorescens Pf0-1]
gi|77384823|gb|ABA76336.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 213
Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 10/192 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
M S D K + + L+ +++ + + + + Q
Sbjct: 1 MSSTEDEQLADLKDWWTRNGKPLVTGGLLALVI--VFGWQAYHKYQSNQSQGASVLYQQL 58
Query: 61 LE--LFNSNKLDDARSS--FEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
LE L K D AR + K+ S+ Y ++++A + V G +AA +
Sbjct: 59 LETTLTPDGKPDAARVADLAGKLNSEFGGSAYAQYGSLFVAKVAVDSGKLDDAATELKAI 118
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
A A+ A + A +L + +E K+L+ + E+ G ++
Sbjct: 119 VA-KPANPALGEIARQRLAQVLGAQNKADEALKLLEGDA--DKSFLATREELKGDLLVQL 175
Query: 176 GKVQKAKTIFEE 187
G+ +A +++
Sbjct: 176 GRTDEANAAYQK 187
>gi|190893827|ref|YP_001980369.1| thioredoxin protein [Rhizobium etli CIAT 652]
gi|190699106|gb|ACE93191.1| thioredoxin protein [Rhizobium etli CIAT 652]
Length = 324
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 52/147 (35%), Gaps = 10/147 (6%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA--AEIFLKVANDD 119
EL + L++A + ++ D + L+ M I + ++ ++A D
Sbjct: 161 ELLAAGNLNEAAQLYGAVMQADPENAKALAGMAECMIAANQHQRARETLTDLPEELARDA 220
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
++ ++ A L D + E + ++P N A L G+
Sbjct: 221 GIQAVLKKLDQIEEARKLGDPVALER-----ELAADPDN---HEARLKLAKILNVEGRRD 272
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMIL 206
+A ++ + + S R Q++
Sbjct: 273 EAAEHLLQIMRKDRSFDDDGARRQLLQ 299
>gi|319957273|ref|YP_004168536.1| tetratricopeptide repeat protein [Nitratifractor salsuginis DSM
16511]
gi|319419677|gb|ADV46787.1| Tetratricopeptide repeat protein [Nitratifractor salsuginis DSM
16511]
Length = 188
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 22/189 (11%)
Query: 20 CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI 79
+ I L +L +L G+ + + + L + K A F+ +
Sbjct: 1 MRRLIPILFLLSVL--------LWGAASPGNEAISRAYRNSYTLESQGKYRKALEVFQPL 52
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR-YAATLQAASILV 138
Y N+ +A + GD K A + K + R A + + +
Sbjct: 53 EPTLKHQYGY--NLRMAWLYSLAGDYKKAVRYYTKASLIKPDSFEPRLGLARV---YLPL 107
Query: 139 DTSSYEEISKILQKLSEPSNPM--HQFANEILGISALKFGKVQKAKTIFEELAK-DNNSP 195
S EI+ + +P N A +L + + A+ I + L +SP
Sbjct: 108 HKPSLAEINAKIVLEKDPLNYYANLYLARTLLAL-----HQKDAARRIVKRLLTYYPSSP 162
Query: 196 FGISTRSQM 204
+ +++
Sbjct: 163 EFLRLSARL 171
>gi|229592853|ref|YP_002874972.1| putative thioredoxin [Pseudomonas fluorescens SBW25]
gi|229364719|emb|CAY52687.1| putative thioredoxin [Pseudomonas fluorescens SBW25]
Length = 290
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 2/124 (1%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ DA + +L +DN L + A L +G+ A +
Sbjct: 119 AAADPLEQAQALFAEGRISDAEAVLVTLLGEDNTNAAAL--ILYARCLAERGELGEAQTV 176
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
V +DD A + D ++ L + + +Q A + L
Sbjct: 177 LDAVKSDDHKAALAGAKAQITFLRQAADLPDAADLKSRLAQNPQDDEAAYQLAIQQLARQ 236
Query: 172 ALKF 175
Sbjct: 237 QYDA 240
>gi|218779730|ref|YP_002431048.1| hypothetical protein Dalk_1883 [Desulfatibacillum alkenivorans
AK-01]
gi|218761114|gb|ACL03580.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 663
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA-PLAVRY 127
D+++ +E+ L + Y +++ +IL +G A E F + + P A
Sbjct: 390 FKDSQTLWERTLEINPHSYQAHNDL--GAILAGQGKLDEAVEHFRQASAIQPDYPEAWNN 447
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE- 186
+ QAA Y + +K L + + +P++ G++ ++ A F
Sbjct: 448 LS--QAAFA---AGDYAQ-AKALAEKALSLDPVNALGRWNAGMACMRLNDRHCALKHFAL 501
Query: 187 ELAKDNNSPFGISTRSQMILANIIAS 212
A D + R+ ++LA ++A+
Sbjct: 502 ATASDPDWG-----RANLMLAKLLAA 522
>gi|115748300|ref|XP_001199177.1| PREDICTED: similar to heat shock protein 60 [Strongylocentrotus
purpuratus]
gi|115920030|ref|XP_001202135.1| PREDICTED: similar to heat shock protein 60 [Strongylocentrotus
purpuratus]
Length = 266
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 28/160 (17%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+K + E+ +A++L N+ D F+ I + +AS +G
Sbjct: 14 HFEKKDYSACREDCLKAVDLGRENRAD-----FKMIAK---------AFSRVASSYAKEG 59
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
D KNA + K + P ++ ++ +D +Y + K ++
Sbjct: 60 DFKNAVLYYDKSLAEHRTPETLKKRQEVEKKLKELDRLAYVDPEKSEEE----------- 108
Query: 164 ANEILGISALKFGKVQKAKTIF-EELAKDNNSPFGISTRS 202
+ LG +A + G A+ + E + ++ ++ S R+
Sbjct: 109 --KALGNAAFQKGDYPTARKHYTEAIKRNPDNCKIYSNRA 146
>gi|115470301|ref|NP_001058749.1| Os07g0113700 [Oryza sativa Japonica Group]
gi|33147009|dbj|BAC80093.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
Japonica Group]
gi|34393726|dbj|BAC83208.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
Japonica Group]
gi|113610285|dbj|BAF20663.1| Os07g0113700 [Oryza sativa Japonica Group]
gi|218198988|gb|EEC81415.1| hypothetical protein OsI_24660 [Oryza sativa Indica Group]
Length = 1011
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-K 114
++ + N + D A S F++IL + Y + + + + + +A F
Sbjct: 267 RLSRGIAQVNEGRYDQAISIFDQILRETPT-YPE-ALIGRGTAYAFQRELDSAISDFTKA 324
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
+ ++ A A + +AA T + E+++K L+
Sbjct: 325 IQSNPSAGEAWKRRGQARAALGEF-TEAVEDLTKALE 360
>gi|294146975|ref|YP_003559641.1| cellulose synthase protein C precursor [Sphingobium japonicum
UT26S]
gi|292677392|dbj|BAI98909.1| cellulose synthase protein C precursor [Sphingobium japonicum
UT26S]
Length = 1125
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 4/147 (2%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM----YIASILVAKG 103
+ + G+ A + +LD A + F LS + + L M S
Sbjct: 115 ARTDRGGDARAAGFRALEAGQLDSAAARFRAALSANPNDADALGGMGIVRLRKSEFAQAR 174
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
D A A + R+ A L +A +D + +I L++
Sbjct: 175 DLLTRASRIGGAGKWAEALQSARFYADLDSARTALDKGDLAQAERIATALTQSDFRDKGP 234
Query: 164 ANEILGISALKFGKVQKAKTIFEELAK 190
A +L + G+ +A ++ +L K
Sbjct: 235 AVSVLASVYERQGRYNEAAELYRQLGK 261
>gi|237837915|ref|XP_002368255.1| selective LIM-binding factor, putative [Toxoplasma gondii ME49]
gi|211965919|gb|EEB01115.1| selective LIM-binding factor, putative [Toxoplasma gondii ME49]
Length = 1644
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 22/185 (11%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+M + +KW + + + + + G A ++ N L +
Sbjct: 922 EMYRQLWKWSDAVRVARAEGKEAYKEVVKHLARQLVAEKGTA--AACQVLVQNDLAEDAV 979
Query: 75 SFE----------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
KI + K N+ A+ KGD +A F+ A
Sbjct: 980 ELALDAGDFSLSLKIAEESAKHMLETVNLRQAAESEEKGDFSSAERHFVLAGKASEAIEM 1039
Query: 125 VRYA----ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
R+ + ++ AS + + + + L+ E + ++ G+
Sbjct: 1040 YRHLKDWKSAIRVASAHAPDAVPDILVSQARALANEGG-----MKEAEAL-YVEAGRADL 1093
Query: 181 AKTIF 185
A ++
Sbjct: 1094 AVAMY 1098
>gi|109948206|ref|YP_665434.1| hypothetical protein Hac_1739 [Helicobacter acinonychis str.
Sheeba]
gi|109715427|emb|CAK00435.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 848
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
+ N N +K K Y + L++L+ L +A+ + + ++ A
Sbjct: 49 KIKNSKNFFKQLLHNKKRLYIALGVLVLLIALIVALSLLIGHKKENQPTSLQANTPNAAS 108
Query: 62 EL-FNSNKLDDARSSFEKILSQDNKLYNPL---------SNMYIASILVAKGDTKNAAEI 111
E N+N + +A E + D + L + + ASIL +G A +
Sbjct: 109 ETPNNTNTITEAEGQIENLDLPDLIGKDSLKRSDENQVDAMIQKASILYEQGQKDEALHL 168
Query: 112 FLKVAN 117
F K+A+
Sbjct: 169 FDKIAS 174
>gi|192361411|ref|YP_001983873.1| TPR domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190687576|gb|ACE85254.1| TPR domain protein [Cellvibrio japonicus Ueda107]
Length = 875
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ N + F QALEL+ NKL++A + ++ Q N + + + I +GD + A
Sbjct: 271 ESNAAQQRFNQALELYQQNKLEEAEAILAELREQFPNDKNTATLLGM--IEFQQGDDERA 328
Query: 109 AEIFLKVANDDLAPLAVRYAATL 131
A +F + + + A ++ A L
Sbjct: 329 ANLFDEYIDPETAASSLLQMAAL 351
>gi|192360667|ref|YP_001983749.1| putative serine/threonine protein kinase [Cellvibrio japonicus
Ueda107]
gi|190686832|gb|ACE84510.1| putative serine/threonine protein kinase [Cellvibrio japonicus
Ueda107]
Length = 892
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 11/154 (7%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L+L + +DA ++ I ++ + L A++ AK D + A E + +
Sbjct: 597 LQLAEQ-RFNDADNTIASIYARQTD--DALQLFLKANLYQAKNDYQKAIETYRILVKLKP 653
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+ + A S +D++ ++K L +P+ AN+I G AL G Q
Sbjct: 654 TAINYQNLAIAYWYSGKLDSAK-TNLTKALSL-----SPLSYKANQIRGAIALSEGDTQS 707
Query: 181 AKTIFEELAKDNNSPFGISTR--SQMILANIIAS 212
A F ++ +P IS + ++ N+ A+
Sbjct: 708 AIVSFGKITDKRKNPTDISNLGIAHLLAGNLDAA 741
>gi|283851085|ref|ZP_06368369.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B]
gi|283573481|gb|EFC21457.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B]
Length = 221
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 6/169 (3%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
IL++L+ A + L+ + + + + ++ E +
Sbjct: 33 AGILVVLAAAGGYALYGVYQKGQVEKAENELGTIVTTKAG---AERLAALEGLARTAPAG 89
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
++ +A GD AA + V+ AP ++ A L A+ L + +
Sbjct: 90 AKDGIHLEMAKTAQELGDFAKAAAAWEAVSK--SAPAGMKTVAGLGYATALSKSGQDAKA 147
Query: 147 SKILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
++L+ L+ + + L +A G+ QKA +E + N
Sbjct: 148 VEVLEGLAVSAPKAFTMTVDRQLATTAEAAGQWQKALAAYERMKTGGNV 196
>gi|256810580|ref|YP_003127949.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
AG86]
gi|256793780|gb|ACV24449.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
AG86]
Length = 290
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 12/130 (9%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L + K +DA +++K+ Y + IAS+L G + + +
Sbjct: 131 LEDFGKYEDALKAYKKMAEIAPNPY---AYYKIASLLYNLGKHEESLRYLDEALK---ID 184
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISALKFGKVQK 180
A L+A +L S +IS+ L L + P + A +LG+ L+ G+ +
Sbjct: 185 SKFVSALILKAEILL----SLNKISEALLTLKKALDIRPDNTQALFVLGLIHLRIGEFDE 240
Query: 181 AKTIFEELAK 190
A F ++ +
Sbjct: 241 AINAFNKVLE 250
>gi|326386010|ref|ZP_08207634.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326209235|gb|EGD60028.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 882
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 64/158 (40%), Gaps = 11/158 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILS---QDNKLYNPLSNM--YIASILVAKGDTKNAAEI 111
AL L + + D+A + + +L+ Q + + + A L+A G + A ++
Sbjct: 220 MQHALVLVEAGRGDEALAHLDAMLAQLPQGAAGAPLRAAILGHRAIALMALGRPEQALDV 279
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
+ + A +A ++L Y+ + +++ N A+ +LG++
Sbjct: 280 YDEALRAAPADA---DIHANRALALLALRRPYDALVS--AQMAARHNSAAPQAHNVLGLA 334
Query: 172 ALKFGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILAN 208
L+ G+ A T F + LA + P +S + +
Sbjct: 335 HLRLGEYGAAATAFGQGLALRPDDPDMLSHLATALAEL 372
>gi|260589297|ref|ZP_05855210.1| putative tetratricopeptide repeat-containing domain protein
[Blautia hansenii DSM 20583]
gi|260540378|gb|EEX20947.1| putative tetratricopeptide repeat-containing domain protein
[Blautia hansenii DSM 20583]
Length = 497
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 33/178 (18%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+K EN +A + D A ++ E + ++ LS
Sbjct: 322 QEAGEKAAAYENLIKAWQAHQEGNSDTAANAIEGVNAE------LLS------------- 362
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE----PSNPM 160
A ++ + VR + AS +++ Y+ L+K N M
Sbjct: 363 -VEAKSMYDSIMK--SVGSTVRK-KYVNEASAALESGDYDTAIAGLEKALNIGKQDKNTM 418
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
Q A + K G + A ++++ D ++ ++ L SDQ +
Sbjct: 419 FQLAQ-----AYDKKGDKENANQWYQKII-DEFPGTKAASDAKDYLEANGGSDQAPAE 470
>gi|94970032|ref|YP_592080.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94552082|gb|ABF42006.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 1096
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A +N+ L+ A ++K L + Y+ L+N +A + + + +A F K A +
Sbjct: 710 AETYYNAGDLNKAIEYYKKQLEVNP--YDDLANTGLAQVYMTQYKYDDALAAFKKQAEIN 767
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A L + + Y+ L++ + P A +LG + L G+ +
Sbjct: 768 PLDKT----AHLGIGQVDIIREDYKAAVPELER-AVSILPQSSVARYMLGNAYLNTGQTE 822
Query: 180 KAKTIFEELAK-DNNSP 195
KA T FEE K D N+P
Sbjct: 823 KAITAFEESVKLDANNP 839
>gi|220917161|ref|YP_002492465.1| Lytic transglycosylase catalytic [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955015|gb|ACL65399.1| Lytic transglycosylase catalytic [Anaeromyxobacter dehalogenans
2CP-1]
Length = 750
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F A L + K +AR + ++ Y + +A +L GD A L V
Sbjct: 348 FFAADLLARAGKSQEAREALAALVRDHPGGDYREEARFRLAWLLKQAGDLDGAVAQLLAV 407
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+ +AL L + ++A + + L + ++ + A++ A G + A + +V
Sbjct: 64 AYIRALALLEVPRPEEALKVLAGLEEKVPDLADRVAFLRGAALSAA-GRPREAMAAWAQV 122
Query: 116 ANDDLAPLAVRYAATLQAA 134
D A + +AA
Sbjct: 123 -PDRSLLAAEARLSRARAA 140
>gi|325067695|ref|ZP_08126368.1| hypothetical protein AoriK_07734 [Actinomyces oris K20]
Length = 727
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 61/160 (38%), Gaps = 23/160 (14%)
Query: 65 NSNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKGDTKNAAEIFLKV--- 115
++ +LD A + +E+IL + L+ +A A G + A ++ +V
Sbjct: 458 DAGRLDKAITLYEQILEDSIRVLGPDHPSTLASRFDLAGAYRASGRLEEAITLYEQVFSG 517
Query: 116 -----ANDDLAPLAVRY-AATLQAASILVDTSSY--EEISKILQKLSEPSNPMHQFANEI 167
DD + L R A + D + ++I ++ P +P A
Sbjct: 518 RSRVLGPDDHSTLTARDNLADTYWEAGRFDEAITLKKQILADAMRIMGPDSPGASAARNN 577
Query: 168 LGISALKFGKVQKAKTIFEELAKD------NNSPFGISTR 201
L + G++ +A +++E D + P +++R
Sbjct: 578 LAATYRDAGRLNEAIPLYQENLDDVARVMGLDHPRTLASR 617
Score = 38.0 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 11/113 (9%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDD---------LAPLAVRYAA-TLQAASILVDT 140
S +A G A ++ ++ D + A +A+ L +
Sbjct: 448 SRNSLADTYRDAGRLDKAITLYEQILEDSIRVLGPDHPSTLASRFDLAGAYRASGRLEEA 507
Query: 141 SS-YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+ YE++ ++ P + A + L + + G+ +A T+ +++ D
Sbjct: 508 ITLYEQVFSGRSRVLGPDDHSTLTARDNLADTYWEAGRFDEAITLKKQILADA 560
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 65/183 (35%), Gaps = 35/183 (19%)
Query: 65 NSNKLDDARSSFEKILSQ-------DNKLYNPLSNMYIASILVAKGDTKNAAEIFLK--- 114
+ + D+A + ++IL+ D+ + + +A+ G A ++ +
Sbjct: 542 EAGRFDEAITLKKQILADAMRIMGPDSPGASA-ARNNLAATYRDAGRLNEAIPLYQENLD 600
Query: 115 -------------VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+A+ A R A L A L + + + +IL P P
Sbjct: 601 DVARVMGLDHPRTLASRHSLAGAYRDAGRLDEAIPLFEQ-NLADFIRIL----GPDRPDT 655
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMILANIIASDQR 215
+ L + G++++A +FE+ +D P +++R + A A
Sbjct: 656 FTSRSTLAGAYQAAGRLEEAIPLFEQNLEDRTRTLGPGHPVTLTSRGNLAGAYRAAGRFE 715
Query: 216 NKK 218
+ +
Sbjct: 716 DAE 718
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 19/161 (11%)
Query: 62 ELFNSNKLDDARSSFEKILSQD--NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
+A F+K+ D Y + M G A EIF + +
Sbjct: 253 AFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEA---YSQGGSPAGALEIFQTMQRNG 309
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
P V + + A YE+ KI + + + +N +L + + G+V+
Sbjct: 310 CFPDTVSHNILINAYGR---AGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVE 366
Query: 180 KAKTIFEELAKDNNSPF-----------GISTRSQMILANI 209
+A+ + + +D P G+S R + + A +
Sbjct: 367 EAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALL 407
>gi|119946631|ref|YP_944311.1| hypothetical protein Ping_3010 [Psychromonas ingrahamii 37]
gi|119865235|gb|ABM04712.1| conserved hypothetical protein [Psychromonas ingrahamii 37]
Length = 390
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 28 LILMILSLAIWF---YLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L+L + +L W+ +KK N + ++ Q L S++ D A F +L DN
Sbjct: 7 LLLPVAALYGWYMGVRSVHQKKQKKGNKLSRDYVQGLNFLLSDQPDKAVDHFIALLEVDN 66
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132
+ ++ + ++ +G+ + A I + L R A LQ
Sbjct: 67 ETIET--HLALGNLFRQRGEVERAIRIHQNLIARPSLTLEQRDLALLQ 112
>gi|323698623|ref|ZP_08110535.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio sp. ND132]
gi|323458555|gb|EGB14420.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio
desulfuricans ND132]
Length = 884
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 20/151 (13%)
Query: 45 SHEKKKNIVGENFAQALE-----LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
SH + +++ +A E L +++D++ + K+L +D + M +A L
Sbjct: 316 SHLRVAADRADDYLKAREMISMILLQQHRVDESMAEARKVLEKDADN--VAARMTLADAL 373
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE--EISKILQKLSEPS 157
KG+T+ A E + V + A + + +Y + + L+
Sbjct: 374 TMKGETEEAIEQYEAVTKNRPDDS---------ATYLKMGALNYAMGNMKQAETDLARAV 424
Query: 158 NPMHQFANEILGISAL--KFGKVQKAKTIFE 186
++ +SA K G+ A+ E
Sbjct: 425 TASPDSIRPMIILSAFYIKNGEKDMARATLE 455
>gi|309792402|ref|ZP_07686869.1| Tetratricopeptide TPR_2 repeat protein [Oscillochloris trichoides
DG6]
gi|308225557|gb|EFO79318.1| Tetratricopeptide TPR_2 repeat protein [Oscillochloris trichoides
DG6]
Length = 1091
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
A A+ LFN+ KLD A F ++ + D L+ YIA +G+T+ A E + +
Sbjct: 45 RIAAAVALFNTGKLDRALQIFTELRAADPNNAFHLN--YIAQGHSRQGNTQAAIESYRAL 102
Query: 116 AN-------DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
A+ A +R L+ ++ + L +L E + ANE L
Sbjct: 103 ADLHISQRRPAQAVEPLREILNLRP--------DMDDQRQRLARLFEEIGSVRDAANEYL 154
Query: 169 GIS 171
++
Sbjct: 155 ALA 157
>gi|323526576|ref|YP_004228729.1| hypothetical protein BC1001_2252 [Burkholderia sp. CCGE1001]
gi|323383578|gb|ADX55669.1| Protein of unknown function DUF2133 [Burkholderia sp. CCGE1001]
Length = 209
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+ ++L++L A + ++ ++ + Q + S +
Sbjct: 20 WGNATTWIVLVVLVTAAAWNGWNFWQRREAAEAAVLYDQVQQAVASGDKAKVSRVAADME 79
Query: 81 SQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ ++ Y ++ + A L A GD A + L+ D + A L+ AS+L+D
Sbjct: 80 DKFSRTAYAQMTALGAAKALYAAGDEAGA-KAQLQWTIDHAKDDEFKQIAKLRLASLLLD 138
Query: 140 TSSYEE 145
+Y++
Sbjct: 139 EKAYDQ 144
>gi|146308875|ref|YP_001189340.1| thioredoxin [Pseudomonas mendocina ymp]
gi|145577076|gb|ABP86608.1| thioredoxin [Pseudomonas mendocina ymp]
Length = 290
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 2/123 (1%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ A LF + + + +++L+++N+ L + A L +G+ A +
Sbjct: 120 AADPMETAQALFAEGRFAETEALLKQVLTENNENAAAL--ILYARCLAERGELGEAQVVL 177
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
V D+ A L D + L + +E ++Q A + L
Sbjct: 178 DAVKGDEHKQALAGAKAQLTFLRQAADLPEVATLKSRLAQNAEDDEAVYQLAVQQLARQQ 237
Query: 173 LKF 175
+
Sbjct: 238 YEA 240
>gi|32473883|ref|NP_866877.1| hypothetical protein RB5756 [Rhodopirellula baltica SH 1]
gi|32444419|emb|CAD74418.1| hypothetical protein-transmembrane prediction [Rhodopirellula
baltica SH 1]
Length = 1329
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 50/151 (33%), Gaps = 22/151 (14%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLF--------------DGSH 46
M S+ S + W+ ++ + +L+ A +++ +
Sbjct: 1 MTSSQSPTSKQSPSGKQPAINTWLVAVVAIGLLAAAGYWFSRGPADPPDDVPGVGGENQS 60
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
E+ + + AL + DDA +++ + + ++ + +
Sbjct: 61 EQLASQNLDLNRVALASMENLDTDDAETAWSALSKSRPED-RSIALNRALNRALT----- 114
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
+ VA D A + AA + AS+L
Sbjct: 115 --IDELSAVATDASAKPEEKQAARQRLASLL 143
>gi|218246150|ref|YP_002371521.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 878
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 53/132 (40%), Gaps = 9/132 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KV 115
+ + L + KL++A ++++K + + N+ IA L +G + A + +
Sbjct: 135 YNLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIA--LSDQGKLEEAIAAYQKAI 192
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ A + L D +E QK + +P A LG + K
Sbjct: 193 QLNPNYADAYYNL-----GNALFDQGKLDEAIAAYQK-AIQLDPNDANAYNNLGAALYKQ 246
Query: 176 GKVQKAKTIFEE 187
GK+++A +++
Sbjct: 247 GKLEEAIAAYQK 258
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 16/149 (10%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK------- 114
L + K D+A ++++K + + L+ + + L +G A + K
Sbjct: 514 ALSDQGKRDEAIAAYQKAIQLNPNF--ALAYNNLGNALSDQGKLNEAIATYQKAIQLNPN 571
Query: 115 -VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ A++ L A ++Y++ + + S H A+ LG+
Sbjct: 572 FALAYNNLGNALKDQGKLNEA-----IAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQ 626
Query: 174 KFGKVQKA-KTIFEELAKDNNSPFGISTR 201
GK+++A + L D + I R
Sbjct: 627 PQGKLEEALREYEAALKIDPKFEYAIKNR 655
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDD 119
+ L + K D+A ++++K + + L +N+ +A L +G A + + +
Sbjct: 275 VALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVA--LSDQGKRDEAIAAYQKAIQLNP 332
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
LA L D +E QK + NP A LG++ GK
Sbjct: 333 NFALAYNNL-----GVALSDQGKRDEAIAAYQK-AIQLNPNFALAYNNLGVALSDQGKRD 386
Query: 180 KAKTIFEE 187
+A +++
Sbjct: 387 EAIAAYQK 394
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDL 120
L + KL++A ++++K + + + N+ IA L +G + A + + +
Sbjct: 106 ALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIA--LSDQGKLEEAIAAYQKAIQLNPN 163
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A L D EE QK + NP + A LG + GK+ +
Sbjct: 164 FTQAYYNL-----GIALSDQGKLEEAIAAYQK-AIQLNPNYADAYYNLGNALFDQGKLDE 217
Query: 181 AKTIFEE-LAKDNN 193
A +++ + D N
Sbjct: 218 AIAAYQKAIQLDPN 231
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 9/128 (7%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDD 119
+ L + K D+A ++++K + + L+ + L +G A + + D
Sbjct: 377 VALSDQGKRDEAIAAYQKAIQLNPNF--ALAYNNLGVALRNQGKRDEAIAAYQKAIQLDP 434
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A L + +E QK + NP A LG + GK +
Sbjct: 435 NDANAYNNL-----GLALRNQGKRDEAITAYQK-AIQLNPNFALAYNNLGNALYSQGKRE 488
Query: 180 KAKTIFEE 187
+A +++
Sbjct: 489 EAIAAYQK 496
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 9/127 (7%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDL 120
LF+ KLD+A ++++K + D N +N+ A L +G + A + + +
Sbjct: 208 ALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAA--LYKQGKLEEAIAAYQKAIQLNPN 265
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A L D +E QK + NP A LG++ GK +
Sbjct: 266 LAEAYNNL-----GVALSDQGKRDEAIAAYQK-AIQLNPNLAEAYNNLGVALSDQGKRDE 319
Query: 181 AKTIFEE 187
A +++
Sbjct: 320 AIAAYQK 326
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 9/128 (7%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDD 119
+ L + K D+A ++++K + + L+ + L +G A + + +
Sbjct: 343 VALSDQGKRDEAIAAYQKAIQLNPNF--ALAYNNLGVALSDQGKRDEAIAAYQKAIQLNP 400
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
LA D + K +Q +N + LG++ GK
Sbjct: 401 NFALAYNNLGVALRNQGKRDEA-IAAYQKAIQLDPNDANAYNN-----LGLALRNQGKRD 454
Query: 180 KAKTIFEE 187
+A T +++
Sbjct: 455 EAITAYQK 462
>gi|261856776|ref|YP_003264059.1| hypothetical protein Hneap_2196 [Halothiobacillus neapolitanus c2]
gi|261837245|gb|ACX97012.1| Protein of unknown function DUF2133 [Halothiobacillus neapolitanus
c2]
Length = 221
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 63/171 (36%), Gaps = 6/171 (3%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVA 101
K + F Q +L +N+ + A + K+ D Y L+ M A ++
Sbjct: 41 QSWQAKNQTAAAIAFHQIEQLSAANQPNQAMEAARKLAESDQGSVYATLALMIGAHEAMS 100
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+ D A I+L A ++ A L+ A + + E+ L+ + P
Sbjct: 101 QNDPAKA-AIYLNDAMQHAKQPSLAALAQLRLARVQWAQNKPEQALTTLKAKTPP-KAYE 158
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
E+ G A+ +E++ +P +T Q+ L N+ A+
Sbjct: 159 SMFTELTGDIQASQKNWAAARAAYEQVL---AAPDSANTMVQIKLDNLPAA 206
>gi|85703386|ref|ZP_01034490.1| thioredoxin [Roseovarius sp. 217]
gi|85672314|gb|EAQ27171.1| thioredoxin [Roseovarius sp. 217]
Length = 305
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 10/131 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA--EIF 112
E A E+ + + DA ++ IL +D + + A I + + D A
Sbjct: 135 EALDAADEMLEAGAVADAAQTYAAILQEDPVNARGYAGLARAHIALGELDQAEAILNGAP 194
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
++++ A A + A D ++ ++ ++P + A L +
Sbjct: 195 AEISHATEIDAAHAQLALARQAQ---DAGPVTDLRAAVE-----ADPANPQARFDLAQAL 246
Query: 173 LKFGKVQKAKT 183
G+ Q+A
Sbjct: 247 YANGQAQEAVD 257
>gi|91974936|ref|YP_567595.1| thioredoxin [Rhodopseudomonas palustris BisB5]
gi|91681392|gb|ABE37694.1| thioredoxin [Rhodopseudomonas palustris BisB5]
Length = 306
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 50/143 (34%), Gaps = 10/143 (6%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
E +A + A + + ++L D ++ + A + G A
Sbjct: 131 APSAAELLQEAEAVLAEGDPATAGAIYAEVLQADAANVEAMAGL--ARCYMQSGAVDQAK 188
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEI 167
++ +V P R A ++A ++D + E + +L ++P+ A
Sbjct: 189 QLLDQV------PENRREDAAVKAVQAMIDLAEQAEQLGPIAELEQKVAADPLDHQARFD 242
Query: 168 LGISALKFGKVQKAKTIFEELAK 190
L + G+ +A E+ K
Sbjct: 243 LATALNAAGRRDEATAHLLEIVK 265
>gi|293552775|ref|ZP_06673436.1| penicillin-binding protein 3 [Enterococcus faecium E1039]
gi|291603084|gb|EFF33275.1| penicillin-binding protein 3 [Enterococcus faecium E1039]
Length = 678
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|1143443|emb|CAA63368.1| penicillin-binding protein 5 [Enterococcus faecium]
Length = 678
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|189424814|ref|YP_001951991.1| hypothetical protein Glov_1755 [Geobacter lovleyi SZ]
gi|189421073|gb|ACD95471.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
Length = 265
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 55/174 (31%), Gaps = 34/174 (19%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-- 112
E +A++L ++ A +K + +P ++ Y L G A + +
Sbjct: 8 EELTRAIDLLDAGNPAAALQLLDKY--SGHTPTDPHAHFYRGDTLAELGRLDEAIQAYRT 65
Query: 113 --LKVANDDLAPLAVRY-----------AATLQAASILVDTSSYEEIS------------ 147
V +D A + A +A +L+D + +
Sbjct: 66 GTDIVPDDPDALTTLGDLLFEAGRHQEALAQYRAV-LLIDPQDADALVSIGLVHNALDQT 124
Query: 148 ---KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPFG 197
K +L+ P + FA LG G + A +++ + D P
Sbjct: 125 EEAKAAFRLAIEHEPDNTFAWNALGDLYYGSGDHKAAIEAYQKGIELDPTDPAA 178
>gi|293559703|ref|ZP_06676231.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E1162]
gi|314938621|ref|ZP_07845901.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133a04]
gi|314944063|ref|ZP_07850727.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133C]
gi|314950301|ref|ZP_07853583.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0082]
gi|314992339|ref|ZP_07857773.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133B]
gi|314996877|ref|ZP_07861881.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133a01]
gi|291606378|gb|EFF35784.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E1162]
gi|313588984|gb|EFR67829.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133a01]
gi|313593155|gb|EFR72000.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133B]
gi|313597338|gb|EFR76183.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133C]
gi|313642009|gb|EFS06589.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133a04]
gi|313643365|gb|EFS07945.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0082]
Length = 678
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|13786078|gb|AAK39559.1|AF362954_2 penicillin-binding protein 5 [Enterococcus faecium]
Length = 678
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|294615234|ref|ZP_06695115.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E1636]
gi|291591958|gb|EFF23586.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E1636]
Length = 678
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|120602263|ref|YP_966663.1| hypothetical protein Dvul_1216 [Desulfovibrio vulgaris DP4]
gi|120562492|gb|ABM28236.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
Length = 231
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 21/61 (34%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+QA L S K +A + EK + + L M +A A G A V
Sbjct: 146 ISQAGALVASGKAAEALAVLEKTETAAPEAARNLVRMQLAVAAEAAGQPARALAACEAVL 205
Query: 117 N 117
Sbjct: 206 A 206
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 13/192 (6%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L +L+++ W + E + +G + D +
Sbjct: 50 VGLFVLVVVIAGGWRMYTRNTLESAQTELGRIVVTM-------QGKDRLDALTVFADNSP 102
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
+ A+ + GD + AA + ++ DD A + A LV +
Sbjct: 103 SSLKNAVRLEEAATAMELGDYQRAAAAYAALSGDDGGAGV---VAGISQAGALVASGKAA 159
Query: 145 EISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG--ISTR 201
E +L+K + L ++A G+ +A E + N+ + +
Sbjct: 160 EALAVLEKTETAAPEAARNLVRMQLAVAAEAAGQPARALAACEAVLASGNTAESDYLRFK 219
Query: 202 SQMILANIIASD 213
Q + A I A
Sbjct: 220 VQDLKARIAAKG 231
>gi|69246521|ref|ZP_00603984.1| Penicillin-binding protein, transpeptidase:Penicillin-binding
protein, dimerisation domain:NTF2-like N-terminal
transpeptidase [Enterococcus faecium DO]
gi|258616153|ref|ZP_05713923.1| penicillin-binding protein 4 [Enterococcus faecium DO]
gi|68195251|gb|EAN09705.1| Penicillin-binding protein, transpeptidase:Penicillin-binding
protein, dimerisation domain:NTF2-like N-terminal
transpeptidase [Enterococcus faecium DO]
Length = 678
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|326772025|ref|ZP_08231310.1| hypothetical protein HMPREF0059_00407 [Actinomyces viscosus C505]
gi|326638158|gb|EGE39059.1| hypothetical protein HMPREF0059_00407 [Actinomyces viscosus C505]
Length = 1009
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 51/140 (36%), Gaps = 17/140 (12%)
Query: 65 NSNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKGDTKNAAEIF----LK 114
+ + D+A + ++IL+ + + +A+I G A ++ +
Sbjct: 542 EAGRFDEAITLKKQILADALRIMGPDSSGASAVRLNLAAIYRDAGRLDEAITLYKENLDE 601
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ-------KLSEPSNPMHQFANEI 167
V+ A+ A DT +E + + +L+ P +P +
Sbjct: 602 VSRALGLDHPETLASRHSLAGAYRDTGRLDEAIPLFEQNLTDFTRLAGPDHPETLASRGT 661
Query: 168 LGISALKFGKVQKAKTIFEE 187
L + G++ +A +FE+
Sbjct: 662 LAGAYRDAGRLDEAIRLFEQ 681
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 56/145 (38%), Gaps = 19/145 (13%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYN-----PLS-NMYIASILVAKGDTKNAAEIFLK---- 114
++ +LD+A FE+ L++ ++ L+ +A G A +F +
Sbjct: 668 DAGRLDEAIRLFEQNLAEVSRALGLDHPETLASRHSLAGAYRDTGRLDEAIPLFEQNLTD 727
Query: 115 ----VANDDLAPLAVRY-AATLQAASILVDTSSY---EEISKILQKLSEPSNPMHQFANE 166
+ D R A+ A+ +D + + + + L P +P + +
Sbjct: 728 FIRILGPDRPDTFTSRSTLASAYQAAGRIDDAIPLFEQNLEDRTRTL-GPHDPRTLTSRD 786
Query: 167 ILGISALKFGKVQKAKTIFEELAKD 191
L + + G++ +A +FE+ D
Sbjct: 787 HLAGAYREAGRLDEAIRLFEQNLAD 811
>gi|86158329|ref|YP_465114.1| lytic transglycosylase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774840|gb|ABC81677.1| Lytic transglycosylase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 750
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F A L + K +AR + ++ Y + +A +L GD A L V
Sbjct: 348 FFAADLLARNGKPQEAREALAALVRDHPGGDYREEARFRLAWLLKQAGDLDGAVAQLLAV 407
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 4/130 (3%)
Query: 71 DARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
A ++ +++ +++ S +A GD A ++ ++A D A A A
Sbjct: 288 QAIATLRPVVAGCEDEGLRVRSLYLLAGASSISGDRDEAVALYRQLARD-FAGHAFADDA 346
Query: 130 TLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
AA +L +E + L L P + A L + G + A
Sbjct: 347 LFFAADLLARNGKPQEAREALAALVRDHPGGDYREEARFRLAWLLKQAGDLDGAVAQLLA 406
Query: 188 LAKDNNSPFG 197
+ ++ G
Sbjct: 407 VEEEQAGRDG 416
>gi|17568771|ref|NP_510568.1| hypothetical protein K09A9.6 [Caenorhabditis elegans]
gi|3873932|emb|CAB01859.1| C. elegans protein K09A9.6a, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|3878425|emb|CAB01887.1| C. elegans protein K09A9.6a, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 872
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILS---QDNKLYNPLSNMY--IASILVAKGDTKNAA 109
+ +A L ++ ++A F+ +++ + Y + Y I + D A
Sbjct: 453 DILDRADNLVEKHQYEEAMELFDHVIAVYPASTRAYFGKARAYDIRGEIEADETDRDKAI 512
Query: 110 EIFLKVANDDLAPLAVRYAATLQ 132
EI+ K+ + P A+ A +
Sbjct: 513 EIYEKILQNSGVPDALFRQAAQR 535
>gi|319763711|ref|YP_004127648.1| hypothetical protein Alide_3035 [Alicycliphilus denitrificans BC]
gi|330824026|ref|YP_004387329.1| hypothetical protein Alide2_1413 [Alicycliphilus denitrificans
K601]
gi|317118272|gb|ADV00761.1| Protein of unknown function DUF2133 [Alicycliphilus denitrificans
BC]
gi|329309398|gb|AEB83813.1| Protein of unknown function DUF2133 [Alicycliphilus denitrificans
K601]
Length = 226
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 4/192 (2%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPL--LILMILSLAIWFYLFDGSHEKKKNIVGENFA 58
M +N D + ++ W P+ +++++L + + ++
Sbjct: 1 MANNFDLQEQEQLDELKHFWNTWGTPITWVLIIVLGGFAAWNGYQLWQSRQAQQATALVE 60
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
S L +F + S +A+ +A +AA+ L +
Sbjct: 61 AVELAAQSGDLARVEQAFGDLKSGYGGTIQAGQAGLLAAKALADAGKWDAAKGVLAWVAE 120
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISALKFG 176
+ A L+ A +L++ +Y+E L SE + + ++L + K
Sbjct: 121 KASDEGYMALARLRLAGVLIEEKAYDEALAQLSARFPSEFAGTVADRKGDVLALQDKKQE 180
Query: 177 KVQKAKTIFEEL 188
+ + + ++ L
Sbjct: 181 AIAEYRRAYQAL 192
>gi|183599736|ref|ZP_02961229.1| hypothetical protein PROSTU_03239 [Providencia stuartii ATCC 25827]
gi|188021995|gb|EDU60035.1| hypothetical protein PROSTU_03239 [Providencia stuartii ATCC 25827]
Length = 207
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 51/151 (33%), Gaps = 7/151 (4%)
Query: 40 YLFDGSHEKKK---NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
+ ++ K + FA+A E +S ++ +K + +Y+ + + +A
Sbjct: 37 WGWNYWQSHKTNMLQESAQQFAKASEELHSGSTQGIEAA-QKFAADTTDVYSAMIGLELA 95
Query: 97 SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
+ V KGD A + + + A + + + + + +
Sbjct: 96 QVAVDKGDLALAEKSLSAALTKAKTDDML-DLINFRLARVQLAQGNADAALASVGNI--K 152
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEE 187
A ++ G + L G AK + +
Sbjct: 153 GKAWQAAAQDVRGDALLHKGDNAGAKAAYTQ 183
>gi|91203857|emb|CAJ71510.1| similar to O-linked GlcNAc transferase [Candidatus Kuenenia
stuttgartiensis]
Length = 430
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 14/133 (10%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPL 123
+ D+A +E I+ + L + A KG + A I+ +A++
Sbjct: 248 ENGLYDEAILEYENIIRITPNNIHALCKLGEA--YAEKGQPEKAILIYNKAIASNPAFSK 305
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISALKFGKVQKA 181
A + S+ + T Y++ K P + F LG++ +A
Sbjct: 306 AYKEL-----GSVYMQTGLYDDAISAWSKFIALSPGSSKIHF---NLGLAYANKDMFSEA 357
Query: 182 KTIFEE-LAKDNN 193
F++ L+ D
Sbjct: 358 IAAFKKALSIDPE 370
>gi|149377039|ref|ZP_01894790.1| putative Zn-dependent protease [Marinobacter algicola DG893]
gi|149358697|gb|EDM47168.1| putative Zn-dependent protease [Marinobacter algicola DG893]
Length = 426
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 79/189 (41%), Gaps = 23/189 (12%)
Query: 31 MILSLAIWFYLFDGSHEKK------KNIVGENFAQALELFNSNKLDDARSSFE---KILS 81
++ + Y + ++E K + + + +A++L +++KLD+A + K+
Sbjct: 250 LVNKIGAGGYRGEETYENKLSFLRSRQPAYDAYDEAMKLASNDKLDEALAKVNEAIKVEP 309
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
++ Y+ +Y A K + AA F K L P Y L + ++ +
Sbjct: 310 EEAAFYSLRGRIYRA-----KENLDKAAADFDK--ATSLYPEMFTY--QLHSGLNALELN 360
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+Y++ + L + ++ + LG A+K GK Q+A + + + ++
Sbjct: 361 NYDKAREHLSQANQVVPTSIAYLR--LGDVAVKQGKRQEAIQYY---STAAEAGGEVAEE 415
Query: 202 SQMILANII 210
++ LA +
Sbjct: 416 AKRKLAQLT 424
>gi|124515962|gb|EAY57471.1| probable TPR-domain containing protein [Leptospirillum rubarum]
Length = 1076
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 7/146 (4%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ + + +A NK + A F+ ILS + + A IL+++
Sbjct: 745 ETYRATHPSDISATMLEAQGELLLNKPEKALPLFDAILSSHPDN--TGARLGKAGILLSQ 802
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G T+ A + + D LA A L A I + + + + L+KL + Q
Sbjct: 803 GKTEEAKNLGTTILADHPDNLA----ANLLMARIDQKNNDFTDEADRLEKLHQKHPDWIQ 858
Query: 163 FANEILGISALKFGKVQKAKTIFEEL 188
+ ++ + LK + ++A++I + +
Sbjct: 859 PSLTLVAV-DLKLKRFREAESIADSI 883
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L N + +A+ + ++++ N + + + + L + A E+F +
Sbjct: 206 ALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREE-KPAEALEVFSRAIERGAE 264
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQK--LSEPSNPMHQFANEILGISALKFGKVQ 179
P ++ Y+ +QA ++ + + + +++ L PS + + ++++K G ++
Sbjct: 265 PDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTS----VILASVKQGNME 320
Query: 180 KAKTIFEELAKDN 192
A +E+ D
Sbjct: 321 DAIRWKDEMVSDG 333
>gi|257880895|ref|ZP_05660548.1| penicillin-binding protein PbP5 [Enterococcus faecium 1,231,502]
gi|294622435|ref|ZP_06701459.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
U0317]
gi|257816553|gb|EEV43881.1| penicillin-binding protein PbP5 [Enterococcus faecium 1,231,502]
gi|291598079|gb|EFF29187.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
U0317]
Length = 679
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|209521125|ref|ZP_03269853.1| conserved hypothetical protein [Burkholderia sp. H160]
gi|209498435|gb|EDZ98562.1| conserved hypothetical protein [Burkholderia sp. H160]
Length = 209
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 5/182 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDD-ARSSFEKI 79
+ ++L+ L + ++ ++ + Q + + AR + +
Sbjct: 20 WGNATTWIVLVALLAGASWNGWNFWQRRQATQAAVLYDQVQQAVAAGDKAQIARVAADME 79
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
Y ++ + +A L A GD A + L+ D + A L+ AS+L+D
Sbjct: 80 DKFGRTAYAQMTALGVAKALYAAGDEAGA-KAQLQWTIDHAKDDEFKQIAKLRMASLLLD 138
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+Y++ +L + + ++A GK A+ + +LA D+ S S
Sbjct: 139 DKAYDQGLALLAEPQSDAFKGVVADRRGDLLAA--QGKRDDARAAY-KLALDSLSKSDTS 195
Query: 200 TR 201
R
Sbjct: 196 AR 197
>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L]
gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L]
Length = 463
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 9/132 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ L L + A SF + + D KL + +A IL KG+ A F V
Sbjct: 221 YQLGLLLVEQGEKSAAEESFREAVKVDPKLAP--AQYQLAVILFEKGELAEAITRFRLVT 278
Query: 117 NDDLAPL-AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ + A R A Y E L+ L+ +P H + LG++ +
Sbjct: 279 ELEPENVDAYRQLGAALTA-----NGEYAEAVTTLK-LAVQLDPYHALTHYNLGVALQQQ 332
Query: 176 GKVQKAKTIFEE 187
+ ++A +++
Sbjct: 333 EQYEEAMAEYQQ 344
>gi|257892583|ref|ZP_05672236.1| penicillin-binding protein PbP5 [Enterococcus faecium 1,231,408]
gi|257828962|gb|EEV55569.1| penicillin-binding protein PbP5 [Enterococcus faecium 1,231,408]
Length = 679
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|257889475|ref|ZP_05669128.1| penicillin-binding protein PbP5 [Enterococcus faecium 1,231,410]
gi|257825835|gb|EEV52461.1| penicillin-binding protein PbP5 [Enterococcus faecium 1,231,410]
Length = 679
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|253998552|ref|YP_003050615.1| type II and III secretion system protein [Methylovorus sp. SIP3-4]
gi|253985231|gb|ACT50088.1| type II and III secretion system protein [Methylovorus sp. SIP3-4]
Length = 650
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 63/179 (35%), Gaps = 22/179 (12%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+ I ++++IL+LA + EKK F +A L N+ ++ + +++
Sbjct: 5 RPIRIAVMVLILALAA-----CSAQEKKLQQGNAEFQEARALVNAGDIEGGIARLRELVR 59
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
L + + D + A + +R L A I+ +
Sbjct: 60 TFPDNPEYLGYLKR------QQDLQLAMLLKEA--------DQLRQQGRLSEAEIVYQRA 105
Query: 142 -SYEEISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL-AKDNNSPFG 197
++ ++ Q L + SN A S L G A+ + + A++ +P
Sbjct: 106 LGLDQQNQRAQDGLRQLSNATRHQAMMARAQSMLAAGDTDGAQNMARAILAEEAGNPAA 164
>gi|294619993|ref|ZP_06699358.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E1679]
gi|291593715|gb|EFF25224.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E1679]
Length = 678
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|260559911|ref|ZP_05832090.1| penicillin-binding protein PbP5 [Enterococcus faecium C68]
gi|260074135|gb|EEW62458.1| penicillin-binding protein PbP5 [Enterococcus faecium C68]
Length = 679
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|257878325|ref|ZP_05657978.1| penicillin-binding protein [Enterococcus faecium 1,230,933]
gi|257812553|gb|EEV41311.1| penicillin-binding protein [Enterococcus faecium 1,230,933]
Length = 678
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|187927009|ref|YP_001893354.1| putative hemin-binding outer membrane transmembrane protein
[Ralstonia pickettii 12J]
gi|241665338|ref|YP_002983697.1| hemin-binding outer membrane transmembrane protein [Ralstonia
pickettii 12D]
gi|187728763|gb|ACD29927.1| putative hemin-binding outer membrane transmembrane protein
[Ralstonia pickettii 12J]
gi|240867365|gb|ACS65025.1| putative hemin-binding outer membrane transmembrane protein
[Ralstonia pickettii 12D]
Length = 821
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 52/137 (37%), Gaps = 10/137 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASIL------VAKGDTKNAAEIFLKVANDDLAP 122
+D A + E +L + + A + ++G K+A + + ++ P
Sbjct: 273 IDQAVAEIEALLKKVPDT-PENAEFRQAIVADEVVALASRGRMKDAVKRYEAMSQTGKVP 331
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
R AA A + + ++ L+ + P E L + L G+ ++A+
Sbjct: 332 AYTRVAAGDAYAYLDTPDKAAAAYARALKD-AGPGEIETGDVQEALFYALLDTGRFEEAR 390
Query: 183 TIFEELAKDNNSPFGIS 199
+ +++ DN P +
Sbjct: 391 ALLDKMKADN--PEYVR 405
>gi|148265712|ref|YP_001232418.1| tetratricopeptide domain-containing protein [Geobacter
uraniireducens Rf4]
gi|146399212|gb|ABQ27845.1| Tetratricopeptide domain protein [Geobacter uraniireducens Rf4]
Length = 239
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 4/118 (3%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFL 113
+ + +A LF++N A +FE + Y + ++ + + A E F
Sbjct: 121 DAYIKAFGLFSANNYSGAIEAFEAFVKSYPDSEYAGNAVYWVGECYYTQHNYSKALESFS 180
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILG 169
KV D V A L+ L+ + + LQ L P +P A E LG
Sbjct: 181 KVVVDYPKGNKVPD-AMLKIGYSLISMNEPLKARAELQSLVGKYPKSPAAAKARERLG 237
>gi|301058162|ref|ZP_07199214.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300447794|gb|EFK11507.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 482
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 11/146 (7%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLA 121
L ++++A F + + + +N+ IA L + K A E L A D
Sbjct: 336 LLRQGRIEEAAKHFYQAVRIKPRYAKAQNNLGIA--LAQQKKLKEAKEHLLLAARLDPNN 393
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P + + ++ +S E + + + NP A LG LK ++ +A
Sbjct: 394 PEILNNVGQV----FMLQGNSKEAV--RYFEATIQQNPNFAQALTNLGFMRLKENRMDEA 447
Query: 182 KTIFEELAKDNNSPFGISTRSQMILA 207
F +P R + LA
Sbjct: 448 AQYFHRAL--AVAPDMGRARQGLNLA 471
>gi|327481751|gb|AEA85061.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 213
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 7/166 (4%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL-ELFNSNKLDDAR-SSFEKILSQD 83
L ++ L L + + + + Q L S + D A S +L +D
Sbjct: 25 VLGAVIALVLVFGWQFWQKHQINQAQSASVVYQQLLGAALESGEADAAEVSRLGNLLKKD 84
Query: 84 NKL--YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
Y ++++A + V G AA + D A + A + A +L
Sbjct: 85 FAGTHYAQYGSLFVAKVAVESGRLDEAASELRAIV-DKPADKTLDELARQRLARVLAAQG 143
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+E K+L + E+ G ++ G+ +A + +
Sbjct: 144 KADEAIKLLDG--KVDAAFVASREELRGDLLVQLGRNDEAHAAYSK 187
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 9/127 (7%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDL 120
L + KL++A ++++K + + N+ IA L +G + A + + +
Sbjct: 140 ALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIA--LSDQGKLEEAIAAYQKAIQLNPN 197
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A L D +E QK + +P A LG + K GK+++
Sbjct: 198 YADAYYNL-----GVALFDQGKLDEAIAAYQK-AIQLDPNDANAYNNLGAALYKQGKLEE 251
Query: 181 AKTIFEE 187
A +++
Sbjct: 252 AIAAYQK 258
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
N + + LF+ KLD+A ++++K + D N +N+ A L +G + A
Sbjct: 197 NYADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAA--LYKQGKLEEAIA 254
Query: 111 IFL-KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ + + A L D +E QK + NP A LG
Sbjct: 255 AYQKAIQLNPNLAEAYNNL-----GVALSDQGKRDEAIAAYQK-AIQLNPNFALAYNGLG 308
Query: 170 ISALKFGKVQKAKTIFEE 187
+ GK +A +++
Sbjct: 309 NALSDQGKRDEAIAAYQK 326
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 9/132 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KV 115
+ + L + KL++A ++++K + + + N+ +A L +G A + +
Sbjct: 169 YNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVA--LFDQGKLDEAIAAYQKAI 226
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D A + L EE QK + NP A LG++
Sbjct: 227 QLDPNDANAYNNL-----GAALYKQGKLEEAIAAYQK-AIQLNPNLAEAYNNLGVALSDQ 280
Query: 176 GKVQKAKTIFEE 187
GK +A +++
Sbjct: 281 GKRDEAIAAYQK 292
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 9/128 (7%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDD 119
+ L + K D+A ++++K + + L+ + + L +G A + + +
Sbjct: 275 VALSDQGKRDEAIAAYQKAIQLNPNF--ALAYNGLGNALSDQGKRDEAIAAYQKAIQLNP 332
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
LA + D + K +Q +N + LG++ GK
Sbjct: 333 NFALAYNGLGNALSDQGKRDEA-IAAYQKAIQLDPNDANAYNN-----LGLALRNQGKRD 386
Query: 180 KAKTIFEE 187
+A T +++
Sbjct: 387 EAITAYQK 394
>gi|171915654|ref|ZP_02931124.1| Peptidase C39, bacteriocin processing [Verrucomicrobium spinosum
DSM 4136]
Length = 1793
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 67 NKLDDARSSFEKILSQDNKLYNP--LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ D+A+ FE S+ + + + + + + +G+ A E+F ++ +D P
Sbjct: 208 GRYDEAQKWFEASQSRAPLGHPMHQKALLRLGVVAMDRGELDKATELFARLRQNDSDPSR 267
Query: 125 VRYAAT-LQAASIL 137
+ YA+ ++A ++
Sbjct: 268 MTYASYWIRALGLM 281
>gi|149375009|ref|ZP_01892782.1| hypothetical protein MDG893_08125 [Marinobacter algicola DG893]
gi|149360898|gb|EDM49349.1| hypothetical protein MDG893_08125 [Marinobacter algicola DG893]
Length = 218
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 64/191 (33%), Gaps = 14/191 (7%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMI---LSLAIWFYLFDGSHEKKKNIVGENFAQAL- 61
+ + + + K +K L++ + L++ + + +++ FA+ +
Sbjct: 3 EMRTEEETVQAIKDWWKKNGSSLLIGVGAALAIVFGWQAWQNHQMQQRTEAASQFAELIN 62
Query: 62 ---ELFNSNKLDD----ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ + N+ D A + E+ +Y L M ++ +GD + A E
Sbjct: 63 AYSDETDENRADTVAYVAENLREEYSDSAFAIYGML--MLARQQVMDQGDPEGAIESLTW 120
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A+ + A YE+ ++ + + E+ G L
Sbjct: 121 AQEKAGESGALAMVIRNRLARAQFAAEQYEDALATIEG-TGNTGSFGAIFTELKGDILLA 179
Query: 175 FGKVQKAKTIF 185
G + A+ +
Sbjct: 180 QGNREGAREAY 190
>gi|197122379|ref|YP_002134330.1| lytic transglycosylase catalytic [Anaeromyxobacter sp. K]
gi|196172228|gb|ACG73201.1| Lytic transglycosylase catalytic [Anaeromyxobacter sp. K]
Length = 750
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F A L + K +AR + ++ Y + +A +L GD A L V
Sbjct: 348 FFAADLLARAGKSQEAREALAALVRDHPGGDYREEARFRLAWLLKQAGDLDGAIAQLLAV 407
>gi|790437|emb|CAA59288.1| low affinity penicillin-binding protein 5 (PBP5) [Enterococcus
faecium]
Length = 673
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNSNKLD 70
K GK +++I + ++ + E + GE F QAL + NK
Sbjct: 1 KHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDYNKAA 60
Query: 71 D 71
+
Sbjct: 61 E 61
>gi|314951075|ref|ZP_07854137.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133A]
gi|313596709|gb|EFR75554.1| penicillin binding protein transpeptidase domain protein
[Enterococcus faecium TX0133A]
Length = 678
Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFFYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|218780012|ref|YP_002431330.1| hypothetical protein Dalk_2169 [Desulfatibacillum alkenivorans
AK-01]
gi|218761396|gb|ACL03862.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 798
Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 71/176 (40%), Gaps = 34/176 (19%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DD 119
L + + KL +A +EK L+ + + ++NM A + + G+ + A + + + D
Sbjct: 537 LIMAKNGKLQEAVEYYEKSLAANPQSAETMANMGDAQVAL--GNLEKAKGFYTQALSVDT 594
Query: 120 LAPLAVRYAATLQ-------------AASILVDTSSYEE---------ISKILQKL---- 153
+ L AA++ +D E I +++L
Sbjct: 595 DSFRVHASMGKLLINLGEFQQGLDQFAAALAIDHQDQETQNDLLLALRILNEIERLEDAI 654
Query: 154 -SEPSNPMHQFANEILGISALKFGKVQKAKTI-FEELAKDNNSPFGISTRSQMILA 207
++P+ P + FA L ++ K +A+ + + L K + P G++ +++ +
Sbjct: 655 QTQPNQPANYFA---LAKLLGRYNKTDRAEQLCLQGLEKAPSDPNGLNQLAKVRMD 707
>gi|4633282|gb|AAD26697.1|AF117609_3 low affinity penicillin-binding protein PbP5 [Enterococcus
faecium]
Length = 679
Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLDD 71
NK +
Sbjct: 62 NKAAE 66
>gi|310791974|gb|EFQ27501.1| tetratricopeptide [Glomerella graminicola M1.001]
Length = 1413
Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 6/111 (5%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+A+S FE +LS D + + + I + D +A + F + P +
Sbjct: 432 PRHHTEAKSLFEGVLSHDPSS--TAALIGVGLIYEEEEDYDDAIDFFERALK--RDPSNL 487
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
R +AA + YE L+ M A E+L + + G
Sbjct: 488 R--VRTEAAWVQALKEDYETAKTQLEDSLPLIEKMSPPAKELLAQTQYRLG 536
>gi|291326480|ref|ZP_06124693.2| Sel1 repeat family protein [Providencia rettgeri DSM 1131]
gi|291314151|gb|EFE54604.1| Sel1 repeat family protein [Providencia rettgeri DSM 1131]
Length = 1556
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 17/167 (10%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L IL+I+++AI Y + ++ + +G +L+ + A F+K +D+
Sbjct: 9 VGLFILIIIAVAIGIYFVNTTNSSSPSQLG------YDLYQQGESQAAFEQFQKNADKDS 62
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
+ L+ MY I D AA+ +L A +D A+ + ++ DTS+ E
Sbjct: 63 QSAFALAMMYKEGIGTKTDDV--AAQNWLIKAAEDNNKNALYNLGFFRYKHLIEDTSTDE 120
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKF------GKVQKAKTIF 185
L K ++ + A E++G L ++ ++ F
Sbjct: 121 NGLISLTKAADLGV---KEAQEMIGGIYLADKYEQVPQNIELSRQYF 164
>gi|254512206|ref|ZP_05124273.1| thioredoxin [Rhodobacteraceae bacterium KLH11]
gi|221535917|gb|EEE38905.1| thioredoxin [Rhodobacteraceae bacterium KLH11]
Length = 305
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 6/134 (4%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A ++ DA +F IL +D + A I + D A +
Sbjct: 135 DAVQAAEDMLTEGAAVDAAQTFAAILGEDPNHAAAYGGLVRAHIALGDLDQAEAI-LNGA 193
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A +P A L+ A D E+ ++ ++P + A L +
Sbjct: 194 PAEISTSPEVEAAHAQLELAKQAADAGPVGELKAAVE-----ADPDNHQARFDLAQALHA 248
Query: 175 FGKVQKAKTIFEEL 188
G V++A EL
Sbjct: 249 NGDVEEAVLQLLEL 262
>gi|194214883|ref|XP_001496400.2| PREDICTED: similar to aspartyl (asparaginyl) beta hydroxylase
[Equus caballus]
Length = 775
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 18/146 (12%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA---SILVAKGDTKN----A 108
A +L K+++A ++FE+++ + + + A L K + A
Sbjct: 361 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSPR--ARYGKAQCEDDLAEKRRSNEVLRRA 418
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAA----SILVDTSSYEEISKILQKLSEPSNPMHQFA 164
E + +VA P + + + + + S + K++Q + +
Sbjct: 419 IETYQEVAALPDVPADLMKLSLKRRSERQQFLGHMRGSLLTLQKLVQLFPDDT-----SL 473
Query: 165 NEILGISALKFGKVQKAKTIFEELAK 190
LG+ L G AK ++EE+
Sbjct: 474 KNDLGVGYLLIGDNDNAKKVYEEVLN 499
>gi|115380266|ref|ZP_01467282.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
DW4/3-1]
gi|310821105|ref|YP_003953463.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|115362721|gb|EAU61940.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
DW4/3-1]
gi|309394177|gb|ADO71636.1| TPR repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 435
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 7/129 (5%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
E + + E + D+A+ F + + + A+ +AK D + AA+++
Sbjct: 4 SELYRRGYEQLKAGNYDEAKRLFLAHEEKAGTASETQALLRQAAASLAKSDLEGAAKVYE 63
Query: 114 KVAN-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
++ + P + +D + + P A +LG+
Sbjct: 64 QLLERNPSLPEIYLGLTRISLFLGQLDAARVH------ATAAVRLGPELGLAWTLLGLVH 117
Query: 173 LKFGKVQKA 181
G V A
Sbjct: 118 EAEGDVAGA 126
>gi|114567288|ref|YP_754442.1| hypothetical protein Swol_1773 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338223|gb|ABI69071.1| hypothetical protein Swol_1773 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 175
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 15/120 (12%)
Query: 14 CKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDAR 73
K + + WI LL L+ ++ Y++ + ++ ++ L K D A
Sbjct: 48 RKRPRYSFLWIVALLALLGIAGG---YVYLLTQLPERIETRRIISEGGSLVAEGKFDKAI 104
Query: 74 SSFEKILSQDNKL------------YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
++K+ + + A L+A G+ + A ++ + ++ A
Sbjct: 105 DEYKKLEKLGKPDKMKEKIAIVEKEKQAAAMLQEAQDLLAAGEKEKAKKLLESIPDNTRA 164
>gi|332020414|gb|EGI60834.1| Mitochondrial import receptor subunit TOM70 [Acromyrmex echinatior]
Length = 584
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 97 SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
+++ + A F+K+ ++ LQ A + D + Y + + K +
Sbjct: 460 TMMSETQQYQKAHNYFIKIIKKHSDDTSM-SLVYLQRAFLQFDWNDYSDKAVEYLKKAIE 518
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ + A E LG +K G +++A +F+++
Sbjct: 519 LDEKCRSAYEALGFVEIKRGNIEEAIRLFDKV 550
>gi|78222718|ref|YP_384465.1| tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
gi|78193973|gb|ABB31740.1| Tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
Length = 729
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 11/140 (7%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
++ K+ +AR + +++ + + + A L KG+ A ++ +
Sbjct: 244 DTGKVAEARKALTDLVAIAPE--KEENRLQAAGFLAGKGEADEAEKLLKEGIAGKGKNYK 301
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ---FANEILGISALKFGKVQKA 181
+R A + ++T ++ +L + + Q A L AL +V +A
Sbjct: 302 LR----FALADLYLNTGKGDQAVTLLTETAGLDKASRQESLQAKNALAQIALDRNRVDEA 357
Query: 182 KTIFEELAKDNNSPFGISTR 201
+ E+ K SP R
Sbjct: 358 VKLVTEVLK--ESPKNTDAR 375
>gi|790429|emb|CAA59286.1| low affinity penicillin-binding protein 5 (PBP5) [Enterococcus
faecium]
Length = 673
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNSNKLD 70
K GK +++I + ++ + E + GE F QAL + NK
Sbjct: 1 KHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDYNKAA 60
Query: 71 D 71
+
Sbjct: 61 E 61
>gi|330957529|gb|EGH57789.1| hypothetical protein PMA4326_02984 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 213
Score = 39.2 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 4/164 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++++L W + + + AL K+ S+
Sbjct: 27 GLLALVVVLGWQFWHRHQASQSQGASMLYQQLLETALTPSGQADTARVAELSGKLKSEFG 86
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
+Y ++++A + V G +AA V D A + A + A +L +
Sbjct: 87 GTIYAQFGSLFVAKVAVDAGKLDDAAAELKTV-TDKPANDTLAEIARQRLARVLAAQNKT 145
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
++ K+L + E+ G ++ G+ +A +++
Sbjct: 146 DDALKLLDGDA--DKAFLASREELKGDLLVQLGRTDEAHAAYQK 187
>gi|330988225|gb|EGH86328.1| thioredoxin [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 290
Score = 39.2 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA ELF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQELFAESRFAEAEALLKVLLGEDNTNAAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + + +HQ A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDVAELKSRLAQNPQDDEAVHQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|281345868|gb|EFB21452.1| hypothetical protein PANDA_017050 [Ailuropoda melanoleuca]
Length = 579
Score = 39.2 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 13/125 (10%)
Query: 66 SNKLDDARSSFEKILSQDN---KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ ++A + + + Y+ L AS+L + K A EI+ +
Sbjct: 251 QERKEEAINLLKDSIKYGPEFADAYSSL-----ASLLAEQERFKEAEEIYQAGIKNCPDS 305
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ LVDT S E+ Q+ + +P H A LG G A+
Sbjct: 306 SDLHN----NYGVFLVDTGSPEKAVAHYQQ-AITLSPSHHVAMGNLGRLYRSLGDNSVAE 360
Query: 183 TIFEE 187
++
Sbjct: 361 EWYKR 365
>gi|262280928|ref|ZP_06058711.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257828|gb|EEY76563.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 232
Score = 39.2 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 8/192 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFD---GSHEKKKNIVGENF 57
M ++ K K I+ +LI +I + W Y + + + V +
Sbjct: 1 MSVGDEEQFDSLKSFAKKYGSAMISGILIALI-AFFGWTYWQKKNLATSQVETAKVQQLM 59
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKV 115
+A ++ N L +S +KI+ D + + +A + K D A + KV
Sbjct: 60 DEANASADNPNALSSVTASADKIVKDDIDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKV 119
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N + + L+ A + + Y+E K L +P E+ G +
Sbjct: 120 ENSKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGNVDP--AFKATVEELRGDIFVAK 177
Query: 176 GKVQKAKTIFEE 187
V AK ++
Sbjct: 178 KDVDSAKKAYQA 189
>gi|254437489|ref|ZP_05050983.1| Thioredoxin domain protein [Octadecabacter antarcticus 307]
gi|198252935|gb|EDY77249.1| Thioredoxin domain protein [Octadecabacter antarcticus 307]
Length = 310
Score = 39.2 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 10/133 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ F A + + DA +F IL +D + + + + A
Sbjct: 140 DAFDAAETMLTDGEFADAAETFAAILEEDPNHAGAFGGLARCHLAQDQVEEAEAVL---- 195
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISA 172
+ AP + AA ++AA ++ + + + +L + ++ + A L ++
Sbjct: 196 ----NGAPAEISDAAPIEAARAAIELAKQAANAGPVAELQAAVDADENNHQARLDLAVAL 251
Query: 173 LKFGKVQKAKTIF 185
G + A
Sbjct: 252 HAAGDSEGAVDQL 264
>gi|147841850|emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
Length = 761
Score = 39.2 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 16/127 (12%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
S ++D+A F+ + ++ +N + + + GD + A E F++ +
Sbjct: 174 RSGRMDEALQLFDSMQERNVVSWNAMV-----TGFLQNGDVERAIEFFMR--------MP 220
Query: 125 VRYAATLQA-ASILVDTSSYEEISKIL--QKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R +A+L A + L+ +E +IL + + A IL + G+V KA
Sbjct: 221 ERDSASLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKA 280
Query: 182 KTIFEEL 188
+ +F+++
Sbjct: 281 RQLFDQI 287
>gi|223934537|ref|ZP_03626458.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
gi|223897000|gb|EEF63440.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
Length = 718
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 10/142 (7%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L L A + + K + SN+ ++ +G AA + V +
Sbjct: 581 ISLAKKGDLAGATRWLSDAIRLNPKNVSSHSNL--GNVYAMQGKFDLAAIEYKLVLKQNP 638
Query: 121 APLAVRY-AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A L + +D + E S + K P + LG++ L+ K
Sbjct: 639 DDALTHNNLANLLSEQGKLDEAIGEYRSALKLKADNPEANYN------LGLALLRQNKRD 692
Query: 180 KAKTIF-EELAKDNNSPFGIST 200
+A+ F E L N P
Sbjct: 693 EARQHFNEALRLRPNYPEAQRQ 714
>gi|257483261|ref|ZP_05637302.1| thioredoxin, putative [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|298488885|ref|ZP_07006909.1| predicted thioredoxin [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298156560|gb|EFH97656.1| predicted thioredoxin [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|331012484|gb|EGH92540.1| thioredoxin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 290
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA ELF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQELFAESRFAEAEALLKVLLGEDNTNAAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + + +HQ A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDVAELKSRLAQNPQDDEAVHQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|148654221|ref|YP_001274426.1| protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1]
gi|148566331|gb|ABQ88476.1| Protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1]
Length = 490
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 12/162 (7%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
N ++ +A L ++ +LDDA I + L+ +A + +G+
Sbjct: 323 TSSNADADHLDRAQALLDAGRLDDAMEVLRTIPPNSSLAPRALT--LVARVHANRGELDL 380
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
A + D A+R A L ++ V + + + L++ + NP +
Sbjct: 381 AIAEVRRALEID----ALRDDAYLLLGTMYVRQGQWHDAIQSLER-ARYLNPDAALVSYH 435
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
L ++ + GK + A F + + R++ +L +
Sbjct: 436 LAMAYRQAGKKELAAREFRSALRKLAA-----YRAEDLLEGV 472
>gi|71065250|ref|YP_263977.1| hypothetical protein Psyc_0684 [Psychrobacter arcticus 273-4]
gi|71038235|gb|AAZ18543.1| hypothetical protein Psyc_0684 [Psychrobacter arcticus 273-4]
Length = 264
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 22/185 (11%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFA------QALELFNSNK--LDDA 72
Y IL+ L+ + + +H + + + +A + L + N DA
Sbjct: 20 YGSYIVTAILLALAAYFGWTYWQDNHARVDTVAADQYADIQRLNAEVSLASQNPDLEADA 79
Query: 73 RSSFEK------------ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
++S EK + + +Y + M A V D K A E F K DL
Sbjct: 80 KASLEKSRTQLNKNIDTLVGTHGESVYAWQALMIKARQQVDSDDFKAAGESFKKALAIDL 139
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+ L+ A+ L+ + + + E+LG L
Sbjct: 140 GDAGLEAITRLRYATTLLAAGDAKAALTEASRYMP--SSFEASQQELLGDIYLAQDNTDS 197
Query: 181 AKTIF 185
A +
Sbjct: 198 AIKSY 202
>gi|71907189|ref|YP_284776.1| hypothetical protein Daro_1557 [Dechloromonas aromatica RCB]
gi|71846810|gb|AAZ46306.1| hypothetical protein Daro_1557 [Dechloromonas aromatica RCB]
Length = 429
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 145 EISKILQKLSE--PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
++ ++ L +NP A L ++ + +A +++ D +P +
Sbjct: 52 QVFSSIEALETVLSNNPALNRARLELAVAYYRALNYDQANQQAQKVLDDPKTPENVRLAV 111
Query: 203 QMILANI 209
LA I
Sbjct: 112 LAFLAQI 118
>gi|32265651|ref|NP_859683.1| hypothetical protein HH0152 [Helicobacter hepaticus ATCC 51449]
gi|32261699|gb|AAP76749.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 217
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 37/183 (20%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEK-- 78
Y+ LLIL + + I + + D K+ +A +L +A S +K
Sbjct: 34 YRKYIILLILCMFGIGIGWIINDYMVSKRAEEASLAYA---KLAEDATDKEALQSLKKSS 90
Query: 79 ---------------------ILSQDNKLYNPLSNMYIAS-------ILVAKGDTKNAAE 110
++ N+ L+ +AS D+ AA
Sbjct: 91 PALYDLYRYSNAHGDIAVYESLIDSKNEFVRTLARYEVASYRASSLLEKTNNQDSYQAAL 150
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
+ + +++ A LQ A +L +E + L L S+P++ E + +
Sbjct: 151 AQNLESLEKTTSSSLKDLAILQEAYLLFQAHKPQEAHQKLM-LISESSPLY---REAMML 206
Query: 171 SAL 173
Sbjct: 207 KHF 209
>gi|297153438|gb|ADI03150.1| TPR repeat-containing protein [Streptomyces bingchenggensis BCW-1]
Length = 976
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 21/168 (12%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L A ++ ++ + + P + +A +L GD + A+ + + + AP
Sbjct: 147 LCGEQHFLAAIRAYWAVVDSGHPWFRPRAAAPLAKLLREAGDHEGASRVLDYASPEADAP 206
Query: 123 -------LAVRY-------AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI- 167
+ A +++ L+ ++ A++
Sbjct: 207 DLVDLALAPLDDPEEPPFWLAPVRSGLGHYRAGDLTAARAELRAVAAGD--WRHAAHQAG 264
Query: 168 --LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
L L+ G + A+ + +LA+ + G R+ + LA + A++
Sbjct: 265 TVLAGIELRHGDLTAARQLLGDLAETADFTHG--PRAAVALAILDAAE 310
>gi|134058178|emb|CAK38371.1| unnamed protein product [Aspergillus niger]
Length = 548
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 138 VDTSSY-EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT-IFEELA 189
VD ++Y ++ K L+ + ++P A E LG+ K GK +AK +FE L+
Sbjct: 190 VDAAAYHTQVVKELEAILGENHPSVFNAMENLGLLYTKQGKFDEAKKHLFEALS 243
>gi|291459006|ref|ZP_06598396.1| cell division protein FtsI/penicillin-binding protein 2
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291418260|gb|EFE91979.1| cell division protein FtsI/penicillin-binding protein 2
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 478
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 15/210 (7%)
Query: 9 SYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGS------HEKKKNIVGENFAQALE 62
+ + G + LL ++ I+F + + + + F +
Sbjct: 4 KERKRSNSGILKMIYFFSLLFFCMIGYMIYFIGWQAPDLMGSPYNSRMEVFDRRFIRGAI 63
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT--KNAAEIFLKVANDDL 120
L + ++ + E + ++Y S + KG T + AA +L +N +
Sbjct: 64 LSSDGQV---LARTETEGDTEKRVYPYGSLFAHSVGYSTKGKTGLEAAANFYLMESNINP 120
Query: 121 APLAVRYAATLQA----ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
R ++ +DT + S L + + M +IL + +
Sbjct: 121 LRQLFRELTDRKSPGDNVVTTLDTGLQKAASDALGERAGAVICMEPSTGKILAMVSYPGF 180
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ +EEL + N + R+ L
Sbjct: 181 DPNSIREDWEELTDEKNVSGNLVNRATQGL 210
>gi|57642232|ref|YP_184710.1| hypothetical protein TK2297 [Thermococcus kodakarensis KOD1]
gi|57160556|dbj|BAD86486.1| hypothetical protein, conserved, containing TPR-repeat domains
[Thermococcus kodakarensis KOD1]
Length = 341
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 17/137 (12%)
Query: 65 NSNKLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA------N 117
+ D+A + +++L + + + A I +GD A + + +
Sbjct: 186 ELGEYDEAEALIKEVLRNPRDDEIEINAKLIEAEIWAGRGDYDKAFKALREALVKAIDVS 245
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS---EPSNPMHQFA-NEILGISAL 173
DD+ + + L + SYE ++K ++ + E A E ++
Sbjct: 246 DDIFGIVFDTLIDFISG--LFEEGSYEAVAKNMEAFAELFEDDTAYFFRAIGE---LARW 300
Query: 174 KFGKVQKAKTIFEELAK 190
K G +AK F+EL +
Sbjct: 301 KAGD-DEAKKRFDELYE 316
>gi|239908281|ref|YP_002955022.1| hypothetical protein DMR_36450 [Desulfovibrio magneticus RS-1]
gi|239798147|dbj|BAH77136.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 703
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 28/148 (18%)
Query: 54 GENFAQALELF-----NSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKN 107
GE F AL L + +K + +KI+ + + +A+I + KGDT
Sbjct: 181 GEEFDYALHLLCNAYDDLDKYRSKHNLLKKIVETAPRSPLRSSAWQRLAAIRIDKGDTAG 240
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ---------------K 152
A E F D + + L+ + V+ + ++ +
Sbjct: 241 AWEAFKNAMKDSPDSV---DLSHLELQLLAVE-GKWSQVQERANFWLKKFKNLPKEAQVD 296
Query: 153 LSEPSNPMHQFA---NEILGISALKFGK 177
+E + + A E L +++ G
Sbjct: 297 YAELVDLIKHAATNPKEALATLSIESGN 324
>gi|256831172|ref|YP_003159900.1| diguanylate cyclase with TPR repeats [Desulfomicrobium baculatum
DSM 4028]
gi|256580348|gb|ACU91484.1| diguanylate cyclase with TPR repeats [Desulfomicrobium baculatum
DSM 4028]
Length = 816
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
NK AR+ F+ + + PL N A + GD A + F +V +
Sbjct: 619 ARLNKYAKARTIFQDLTGLHPEHIMPLYNFGCACL--KDGDPVAARQAFEQVLSIRPD-- 674
Query: 124 AVRYAATLQAASILVDTSSYE---EISKILQKLSEPS--NPMHQFANEILGISALKFGKV 178
A ++ + + +E + + ++ +S+ H A L A +
Sbjct: 675 --HVYALIRLGLMAEEEGDFERAWNLYEQVRAMSDGEHLAATHNLAYRYLARLAFRRDDR 732
Query: 179 QKAKTIF-EELAKDNN 193
A+ + + +
Sbjct: 733 DTAREYLHQAITANPQ 748
>gi|195118036|ref|XP_002003546.1| GI17973 [Drosophila mojavensis]
gi|193914121|gb|EDW12988.1| GI17973 [Drosophila mojavensis]
Length = 1051
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 14/118 (11%)
Query: 75 SFEKILSQDNKLYNPLSNMYI---ASILVAKGDTKNAAEIFLKVANDDLAPLAVRY---A 128
SFE + +D L+ ++ +G+ AAE + K ++ AP+ R
Sbjct: 856 SFEDMDDED-----VLAGFNAQLNGNVEYYRGNMALAAEFYTKNLLEEGAPVPERDDFLI 910
Query: 129 ATLQAASILVDTSSYEEISKILQ-KLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
+ L+ A I + Y+ L P+ ++G + K + KA F
Sbjct: 911 SKLRLAYIAYEAGDYQLTIDALNLPKVGRLIPLVTSY--LMGKAYYKLDDISKAMEYF 966
>gi|790433|emb|CAA59289.1| low affinity penicillin-binding protein 5 (PBP5) [Enterococcus
faecium]
Length = 674
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNSNKLD 70
K GK +++I + ++ + E + GE F QAL + NK
Sbjct: 1 KHGKNRTGAYIAGAVILIAAAGGGYFYYQHYQETQAVEAGEKTVEQFVQALNKGDYNKAA 60
Query: 71 D 71
+
Sbjct: 61 E 61
>gi|291566679|dbj|BAI88951.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 729
Score = 39.2 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 63/146 (43%), Gaps = 20/146 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVAND 118
A+ L ++++A +++ + ++ + Y S+ ++ +L + + A E + +A +
Sbjct: 186 AVILTRLGRVEEAIAAYRQEITLNPDFY--WSHFHLGDLLSQQNQPEEAIEAYRQAIAIN 243
Query: 119 DLAPLAVRYAATLQA--------ASILVDTSSYEEISKILQKL--SEPSNPMHQFANEIL 168
P A + + + A + T YEE I + + + P + L
Sbjct: 244 PQQPEAHQRLTEILSRHQKTGEDALL---TGRYEEAIAIYRDMVAARPDYSWGYY---GL 297
Query: 169 GISALKFGKVQKAKTIF-EELAKDNN 193
G++ L + ++A +F + ++ + +
Sbjct: 298 GLALLNQRQWREAIDVFNQAISINPD 323
>gi|260221253|emb|CBA29632.1| hypothetical protein Csp_A13120 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 215
Score = 39.2 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 50/151 (33%), Gaps = 6/151 (3%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + K K W+ ++ + + + +++ + +
Sbjct: 7 LEEQEQLDQLKHFWKQYGNAISWLLIIVFGAFAAWNGYQWWS----KRQAEQASAMYEEV 62
Query: 61 LELFNSNKLDDARSSFEKILSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
+ + A ++ + + +Y + + +A + G A + VA
Sbjct: 63 DRVIAGGDVAAADRAYGDMRQRFPSTVYTQQAGLTLAKVAYLSGKPDVAQTALITVAE-S 121
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ A ++ A +L++ S + SK L
Sbjct: 122 SVDPGLAALARIRLAGLLIEAKSIDAASKTL 152
>gi|172060770|ref|YP_001808422.1| hypothetical protein BamMC406_1721 [Burkholderia ambifaria MC40-6]
gi|171993287|gb|ACB64206.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6]
Length = 209
Score = 39.2 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 65/185 (35%), Gaps = 6/185 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+ + K + + + ++L L +A F ++ ++ + Q +
Sbjct: 5 DEQESIESVKAWWAR--WGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKA 62
Query: 64 FNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+N AR++ + Y ++ + A L A GD A + A D
Sbjct: 63 AAANDKATMARAAADMEDKFARTPYAQMTALSAAKTLYAAGDAAGAKAQL-QWAVDHARD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A L+ AS+L+D +Y+ +L P + + G GK A+
Sbjct: 122 DEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGVVADRRGDLLAAQGKTDDAR 179
Query: 183 TIFEE 187
++
Sbjct: 180 AAYKL 184
>gi|149203970|ref|ZP_01880938.1| thioredoxin [Roseovarius sp. TM1035]
gi|149142412|gb|EDM30457.1| thioredoxin [Roseovarius sp. TM1035]
Length = 305
Score = 39.2 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 6/129 (4%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E A E+ + + DA ++ IL +D + + A + + + D A +
Sbjct: 135 EALDAADEMLETGAVADAAQTYAAILQEDPLNARGYAGLARAHMALGELDQAEAI-LNGA 193
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A AP A L A D E+ ++ ++P + A L +
Sbjct: 194 PAEISHAPEIDAAHAQLALARQAQDAGPVNELRAAVE-----ADPANLQARFDLAQALYA 248
Query: 175 FGKVQKAKT 183
G+ Q+A
Sbjct: 249 NGQAQEAVD 257
>gi|83590101|ref|YP_430110.1| O-antigen polymerase [Moorella thermoacetica ATCC 39073]
gi|83573015|gb|ABC19567.1| O-antigen polymerase [Moorella thermoacetica ATCC 39073]
Length = 832
Score = 39.2 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 17/156 (10%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ QA N L A + E+ D + S++ A I + +G TK A +A
Sbjct: 589 YRQATAALQQNNLPAAAAYLEEASRYDPFTASYNSDL--AGIYLQEGKTKEALN--QALA 644
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG------- 169
P + L S +E +++ + P E LG
Sbjct: 645 ASAKEPYNLAILNRLAEVY--WQEGSAQEAVATMER-ARQLAPWVGAVWENLGQVYDAAG 701
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
IS L+ G+ +A+ +F+ + P I + +
Sbjct: 702 ISYLQAGQKDRARQMFQ---EAAALPESIQAKVDTL 734
>gi|283779948|ref|YP_003370703.1| hypothetical protein Psta_2170 [Pirellula staleyi DSM 6068]
gi|283438401|gb|ADB16843.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
Length = 438
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 51/138 (36%), Gaps = 14/138 (10%)
Query: 55 ENFAQALELFN-SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
+ + A L K ++A++ ++K L K N L ++ A + +G + A E++
Sbjct: 125 DVYVAAARLLENQGKFEEAQAQYDKALKVSPKDLNTLVSL--ARMYDRQGQSAKAVELYR 182
Query: 114 -KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGI 170
+A + +A A +++ + + L + P + L
Sbjct: 183 KAIAAHPESGMAYNDLGLCYARQ--------KDLPQSMANLHKAVELQPANVKYRNNLAT 234
Query: 171 SALKFGKVQKAKTIFEEL 188
++ G+ +A +
Sbjct: 235 VQVEAGRADEAIKTLSAV 252
>gi|322706857|gb|EFY98436.1| mitochondrial outer membrane 72K protein [Metarhizium anisopliae
ARSEF 23]
Length = 622
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Query: 58 AQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-V 115
Q LE ++AR +FEK + D Y L+ ++ G+ A E F K +
Sbjct: 303 LQGLEKKTGEGYEEARQAFEKALELGDLGEYEALAYNLRGTMRTLLGNHAEATEDFDKSI 362
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYE----EISKILQKLSEPSNPMHQFANEILGIS 171
D + ++ ASI ++ + E +K L++ + + + A +
Sbjct: 363 ELDPGMIQSY-----IKRASISLELGEPDKADAEFAKALEQDKDDPDVYYHRAQ-----A 412
Query: 172 ALKFGKVQKAKTIFEE 187
+ G + +A+ +++
Sbjct: 413 SFIKGDLAEAQKDYQK 428
>gi|116052097|ref|YP_789059.1| putative thioredoxin [Pseudomonas aeruginosa UCBPP-PA14]
gi|115587318|gb|ABJ13333.1| putative thioredoxin [Pseudomonas aeruginosa UCBPP-PA14]
Length = 289
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A LF ++ DA ++ + +L+++N P + + A L +G+ + A I
Sbjct: 121 DPLEVAQALFAEGRIGDAEATLKALLAENNDN--PAALILYARCLAERGELEEAQAILDA 178
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
V +D+ A L D E+ L + +Q A + L +
Sbjct: 179 VKSDEHKQALAGARAQLTFLRQAADLPDSAELKSRLAADAGDDEAAYQLAVQQLARQQYE 238
Query: 175 F 175
Sbjct: 239 A 239
>gi|294811097|ref|ZP_06769740.1| putative regulator protein [Streptomyces clavuligerus ATCC 27064]
gi|326439561|ref|ZP_08214295.1| putative regulator protein [Streptomyces clavuligerus ATCC 27064]
gi|294323696|gb|EFG05339.1| putative regulator protein [Streptomyces clavuligerus ATCC 27064]
Length = 770
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 19/192 (9%)
Query: 42 FDGSHEKKKNIVGENFAQALELF-------NSNKLDDARSSFE-KILSQDNKLYN---PL 90
+ + G+ + L + + D A + E I+ D Y L
Sbjct: 559 WYEESLRAARAAGDVRDEGQALLGLGFCHRRAGRPDRAAALLERAIVVWDGCGYRRGTAL 618
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA--ASILVDTSSYEEISK 148
+ + + +A+GD A F + L A A V + +Y E
Sbjct: 619 ARTTLGEVSLAEGDPAAAMGHFRRARATLLEVDDPHDATRALALLGRARVCSGAYAEGMA 678
Query: 149 ILQKLS---EPSNPMHQFAN--EILGISALKFGKVQKAKTIFE-ELAKDNNSPFGISTRS 202
L++ S H A E+L SA G A+ +E +A + + R
Sbjct: 679 ELREALDRFTGSGARHWQARTLEMLADSARDGGDGPAAREWYERAVAVYRTTSPDDAERL 738
Query: 203 QMILANIIASDQ 214
+ L A +
Sbjct: 739 EAALGGANAPGE 750
>gi|126179259|ref|YP_001047224.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125862053|gb|ABN57242.1| Tetratricopeptide TPR_2 repeat protein [Methanoculleus marisnigri
JR1]
Length = 1069
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL--APLA 124
+A + FEKIL + + LS + A + +GD A +F +V + +
Sbjct: 164 GDFREAAACFEKILRTNPGSTDLLSRIGAA--YLNQGDYSKAVGLFDRVLDTEPQNIDAL 221
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
A L+ + + + L+ + P + + +L + GK + A
Sbjct: 222 YGKARALEHLGLFQEAADCGAGIVALEPENIP--AWYHRGSMLL-----RAGKHEDALEC 274
Query: 185 FEELA 189
FE++A
Sbjct: 275 FEKVA 279
>gi|91203787|emb|CAJ71440.1| hypothetical protein kustc0695 [Candidatus Kuenenia
stuttgartiensis]
Length = 433
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 21/156 (13%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNK---LYNPLSNMYIASILVAKGDTKNAAEIFL 113
+ A+ L K+D+A L + K +Y M + + + A +
Sbjct: 228 YNLAIALHRQGKIDEAIKELNTTLEINPKYSNVYVVFGLM-----SLREKKFEEALVHYN 282
Query: 114 KVANDDLAPLAVRYA-ATLQAASILVDTSSYE--EISKILQKLSEPSNPMHQFANEILGI 170
K + + RY A + A D + E E+ + NP H A +G
Sbjct: 283 KAMEINPENIEARYQRAIVYALQQRYDEALEENREVLRR--------NPKHANAAYNIGT 334
Query: 171 SALKFGKVQKAKTIFEELAK--DNNSPFGISTRSQM 204
+ ++ KA ++++ K D R+Q+
Sbjct: 335 IYHRMDRMDKAMEWYDKITKKIDPLYEDAYYNRAQI 370
>gi|46580361|ref|YP_011169.1| hypothetical protein DVU1952 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449778|gb|AAS96428.1| hypothetical protein DVU_1952 [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233661|gb|ADP86515.1| hypothetical protein Deval_1359 [Desulfovibrio vulgaris RCH1]
Length = 231
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 21/61 (34%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+QA L S K +A + EK + + L M +A A G A V
Sbjct: 146 ISQAGALVASGKAAEALAVLEKTETAAPEAARNLVRMQLAVAAEAAGQPARALAACEAVL 205
Query: 117 N 117
Sbjct: 206 A 206
Score = 38.0 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 13/192 (6%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L +L+++ W + E + +G + D +
Sbjct: 50 VGLFVLVVVIAGGWRMYTRNTLESAQTELGRIVVTM-------QGKDRLDALTAFADNSP 102
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
+ A+ + GD + AA + ++ DD A + A LV +
Sbjct: 103 SSLKNAVRLEEAATAMELGDYQRAAAAYAALSGDDGGAGV---VAGISQAGALVASGKAA 159
Query: 145 EISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG--ISTR 201
E +L+K + L ++A G+ +A E + N+ + +
Sbjct: 160 EALAVLEKTETAAPEAARNLVRMQLAVAAEAAGQPARALAACEAVLASGNTAESDYLRFK 219
Query: 202 SQMILANIIASD 213
Q + A I A
Sbjct: 220 VQDLKARIAAKG 231
>gi|126738697|ref|ZP_01754402.1| thioredoxin [Roseobacter sp. SK209-2-6]
gi|126720496|gb|EBA17202.1| thioredoxin [Roseobacter sp. SK209-2-6]
Length = 311
Score = 39.2 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 10/137 (7%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
E A ++ + + DA +F IL +D + + I + + D A
Sbjct: 140 SEALEMAEQMLDDGAVADAAQTFAAILGEDGNNAAAFAGLARTHIALEELDQAEAVL--- 196
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGIS 171
+ AP + A ++A ++ + E + + +L+ + P + L +
Sbjct: 197 -----NGAPAEISDAPEIEAVRAQIELARQAENAGPVAELTAQVEAEPDNHEVRFELAQA 251
Query: 172 ALKFGKVQKAKTIFEEL 188
G + A T EL
Sbjct: 252 LHAAGDAEAAVTQLLEL 268
>gi|254491780|ref|ZP_05104959.1| tetratricopeptide repeat domain protein [Methylophaga thiooxidans
DMS010]
gi|224463258|gb|EEF79528.1| tetratricopeptide repeat domain protein [Methylophaga thiooxydans
DMS010]
Length = 409
Score = 39.2 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 11/144 (7%)
Query: 57 FAQALELFNSNKLDDARSSFEKI-LSQDNKLY-NPLSNMYIASILVAKGDTKNAAEIFLK 114
++A L ++ K +A + + + + Y + IA + +G AAE F K
Sbjct: 38 LSKAQALLDAEKYTEAGRALDNLLAQTETGSYDRAVVQQTIAYLYSERGQYDKAAEAFQK 97
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEE----ISKILQKLSEPSNPMHQFANEILGI 170
+ D P V + A +L+ Y++ + LQ ++ N + +L
Sbjct: 98 ALDADALPDDVTHNLRYNLAQLLIADGQYKKGIGLMESWLQSETQADNDVFV----LLAT 153
Query: 171 SALKFGKVQKAKTIF-EELAKDNN 193
+ + K + D +
Sbjct: 154 ANYRIENHTKVIEYIRRAIRNDAD 177
>gi|330888059|gb|EGH20720.1| thioredoxin [Pseudomonas syringae pv. mori str. 301020]
Length = 290
Score = 39.2 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA ELF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 SAADPLKQAQELFAESRFAEAEALLKVLLGEDNTNAAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + + +HQ A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDVAELKSRLAQNPQDDEAVHQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|83747949|ref|ZP_00944980.1| Hypothetical Protein RRSL_02129 [Ralstonia solanacearum UW551]
gi|207723166|ref|YP_002253565.1| hypothetical protein RSMK00390 [Ralstonia solanacearum MolK2]
gi|207743442|ref|YP_002259834.1| hypothetical protein RSIPO_01619 [Ralstonia solanacearum IPO1609]
gi|83725367|gb|EAP72514.1| Hypothetical Protein RRSL_02129 [Ralstonia solanacearum UW551]
gi|206588360|emb|CAQ35323.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|206594839|emb|CAQ61766.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 211
Score = 39.2 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 6/152 (3%)
Query: 39 FYLFDGSHEKKKNIVG---ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
+ + K+ E +A++ ++ K+ A + E Y ++ +
Sbjct: 39 WLGWKNWQRKQAGEASVLYEQVQKAVDAKDAEKIKRAAADMED--KFGRTAYAQMTALSA 96
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
A L D A + L+ D + + A L+ A +L+D +Y++ ++
Sbjct: 97 AKALYEANDAAGA-KAQLQWTIDHASDDEYKAVAKLRLAGLLLDEKAYDQGLALVSGDVA 155
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
P+ ++A +A
Sbjct: 156 PAFAALYADRRGDLLAAQNKKDDARAAYKLAL 187
>gi|168025779|ref|XP_001765411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683464|gb|EDQ69874.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 39.2 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 42/126 (33%), Gaps = 9/126 (7%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA-NDDLAP 122
K+++A + F++ + Y + L + G + AA + V P
Sbjct: 206 SRQGKMEEALADFDRSIELAP--YAADPVLNRGVTLESLGRYEEAAADYEAVLLAQPNDP 263
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
A ++AAS L D + + P FA + + GK +A
Sbjct: 264 AAWNNLGNVKAASGLWDEALSNYRR------AVQIAPEFSFAAANYALILYQVGKENEAF 317
Query: 183 TIFEEL 188
F L
Sbjct: 318 KQFRSL 323
>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
Length = 1129
Score = 39.2 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 55/153 (35%), Gaps = 8/153 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ + L + ++A ++K L D + + +AS G + A + ++
Sbjct: 680 YEKGSALDKLGRSEEALECYQKALDIDPQS--SNAWYGMASTSSDLGRAEEAIAYYDQLL 737
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ +L AS+ Y+E L P + A E + + G
Sbjct: 738 KLNSTDSEALQGKSLALASL----GRYDEAVACFNPLL-ELEPENVEALEGRAFALARSG 792
Query: 177 KVQKAKTIFEELAK-DNNSPFGISTRSQMILAN 208
+ + A ++ + K D + +S ++ ++
Sbjct: 793 RPEAALEDYDVIMKLDPTNSKALSEKASLLEEL 825
>gi|22298823|ref|NP_682070.1| hypothetical protein tlr1280 [Thermosynechococcus elongatus BP-1]
gi|22295004|dbj|BAC08832.1| tlr1280 [Thermosynechococcus elongatus BP-1]
Length = 538
Score = 39.2 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 49/122 (40%), Gaps = 16/122 (13%)
Query: 90 LSNMYIASILVAKGDTKNAAEIFLK-VANDDLAPL--AVRYAATLQAASILVDTSSYEEI 146
++ A++ +GD A + + VA D P A + A + +
Sbjct: 137 VALKQEAALAFDQGDWAQAIAKYQELVALDPNDPESRIYLNNARARQA------GNPMTM 190
Query: 147 SKILQKLSEPSNPMHQFANEIL-GISALKFGKVQKA-KTIFEELAKDNNSPFGISTRSQM 204
+ ++ + P A E+L G++ + A + E + + NSP G+++ ++
Sbjct: 191 AAVVPIGTSPD-----TAKEVLRGVAQYQEQFNASAPHRLLEVVIVNENSPNGVTSLAED 245
Query: 205 IL 206
++
Sbjct: 246 LI 247
>gi|304394325|ref|ZP_07376248.1| thioredoxin [Ahrensia sp. R2A130]
gi|303293765|gb|EFL88142.1| thioredoxin [Ahrensia sp. R2A130]
Length = 351
Score = 39.2 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 10/152 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E +A L A + IL ++ + + + + V G+ A ++ +
Sbjct: 181 EALTEADRLAGEGDHGAASELYGAILGREPGNLDAIVGLGQCYVAV--GEADMAQQLIDQ 238
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISA 172
V P R A++ A VD + L L + ++P + A ++
Sbjct: 239 V------PEEYRSEASIAALIKAVDLAQAGAKLGELAPLKEASEADPKNHQARFDYAMAL 292
Query: 173 LKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
G+ ++A ++ + + + R Q+
Sbjct: 293 NAAGEREEAADQLLDIVRADRTWEDDGARKQL 324
>gi|67477886|ref|XP_654377.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56471419|gb|EAL48989.1| hypothetical protein EHI_131200 [Entamoeba histolytica HM-1:IMSS]
Length = 234
Score = 39.2 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 23/161 (14%)
Query: 29 ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYN 88
IL+I S+ + + K+N G NF AL +N K D+A S
Sbjct: 16 ILIISSIKLGKDVMQFEETMKQN--GMNFELALAKYNIEKYDEALSLLGSEEKD------ 67
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL--AVRYAATLQAASILVDTSSYEEI 146
+ A IL +G AA+I+ +V P + A A + + +
Sbjct: 68 ---KVLKAQILQKQGKFNEAAKIYTEVLETTKQPKTGILTNLA---ACIVSDPSIDSSLL 121
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ + A + L+ G++ KA++ F +
Sbjct: 122 GTKTSDYVSET---YGNA----ALIMLRKGEITKAESYFNK 155
>gi|327267857|ref|XP_003218715.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Anolis
carolinensis]
Length = 503
Score = 39.2 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 24/165 (14%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
F+G+ V + +L + +L DA S F + D+ Y L+ A++ +A
Sbjct: 26 FEGAECGINAEVEKQLEMGKKLLAAGQLADALSHFHAAIEGDSDNY--LAYYRRATVYLA 83
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYA--ATLQAASILVDTSSYEEISKILQKL--SEPS 157
G +K A KV + A LQ +L+ ++E + +++ S S
Sbjct: 84 MGKSKAAIRDLSKVV------ELKQDFTSARLQRGHLLLKQGKFDEAEEDFKRVLQSSSS 137
Query: 158 NPMHQFANEIL------------GISALKFGKVQKAKTIFEELAK 190
+ A L SA G A + +E+
Sbjct: 138 DKEQAEARSQLMKSNEMKHLHSQAQSAYLQGDYYSAIGLLDEILN 182
>gi|167763754|ref|ZP_02435881.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC
43183]
gi|167697870|gb|EDS14449.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC
43183]
Length = 1010
Score = 39.2 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G A + F D+ P R A T Y ++ L +++ + + Q
Sbjct: 268 GKYHEAIKAFGSYLKDNAEPAPRRD-ALYMLGMSYYRTGVYSQVPVTLGEVTANKDALTQ 326
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
A +G++ L+ KA+ FE+ A +++ I ++
Sbjct: 327 NAYLHMGLAYLQLADKNKARMAFEQ-AAASDADLKIKEQA 365
>gi|146337476|ref|YP_001202524.1| putative thioredoxin [Bradyrhizobium sp. ORS278]
gi|146190282|emb|CAL74278.1| putative thioredoxin [Bradyrhizobium sp. ORS278]
Length = 306
Score = 39.2 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 10/138 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E +A + A + ++LS D L+ + A + G + A E +
Sbjct: 136 EILKEAEAVLAEGDPAGAAQIYAEVLSFDAANIPALAGL--ARCYLETGAIEQAKETLAQ 193
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEILGISA 172
V P A R + + A +D + + L +L +NP+ A L I+
Sbjct: 194 V------PEAKRGDSAVSAVQAAIDLAEQAQSLGPLGELEQKVAANPLDHQARFDLAIAL 247
Query: 173 LKFGKVQKAKTIFEELAK 190
GK ++A E+ K
Sbjct: 248 NAAGKRKEATDHLLEIVK 265
>gi|253998757|ref|YP_003050820.1| hypothetical protein Msip34_1046 [Methylovorus sp. SIP3-4]
gi|253985436|gb|ACT50293.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
Length = 566
Score = 39.2 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 20/137 (14%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F L + ++A S+ K + Y N+ ++L +G ++A + K
Sbjct: 118 FNLGFALQTLGRYEEAIPSYRKAAAMQPTFYEAHGNL--GTVLQKQGKMEDAIASYRKAL 175
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISK------ILQKLSEPSNPMHQFANEILGI 170
P AT L D E+ +Q + LG
Sbjct: 176 EIHADPRGYFNLAT-----ALRDHGQLEDAVTAYRSALRMQPDYVD--AWNN-----LGE 223
Query: 171 SALKFGKVQKAKTIFEE 187
+ G + +A +++
Sbjct: 224 ALRDQGNMDEAVKAYQQ 240
>gi|156740383|ref|YP_001430512.1| hypothetical protein Rcas_0362 [Roseiflexus castenholzii DSM 13941]
gi|156231711|gb|ABU56494.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM
13941]
Length = 1075
Score = 39.2 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 73/189 (38%), Gaps = 13/189 (6%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+LA + +H V A + S D + + E + D + L +
Sbjct: 860 ALAQAIEWYQRAHAIAPQDVAILNEYASAVARSGDYDKSLALLETSRNLDPLYNDTL--L 917
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKI--LQ 151
+ +L A+G A + +L + D P A+ + A + D +
Sbjct: 918 RMGEVLRAQGRFAEAVDQYLTLL--DRDPSALNGQISAIATVLSSDPVQLARLRDRYRAA 975
Query: 152 KLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ--MILANI 209
+ S P +P I+G+ +++ G ++ A + F E + P + R ++L+++
Sbjct: 976 QASRPDDPQLAS---IVGLLSVRSGDLETAASAFAEAVRLQ--PDNLEARQNYTIVLSDL 1030
Query: 210 IASDQRNKK 218
+ DQ ++
Sbjct: 1031 LRYDQAAQQ 1039
>gi|297617494|ref|YP_003702653.1| serine/threonine protein kinase [Syntrophothermus lipocalidus DSM
12680]
gi|297145331|gb|ADI02088.1| serine/threonine protein kinase [Syntrophothermus lipocalidus DSM
12680]
Length = 655
Score = 39.2 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 69/209 (33%), Gaps = 34/209 (16%)
Query: 7 ANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNS 66
+ YK IA +++L I S+ + + K + + L
Sbjct: 257 SREYKIGKLRRVLAALGIAAMMLLGIASIGKGVEERELTSTKLYQ---QRIDAGISLAER 313
Query: 67 NKLDDARSSF-EKIL-SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-----VANDD 119
+ A SF E + + ++Y+ L+ +Y + + A E + V DD
Sbjct: 314 GEYTQAEDSFLEALKYKNEPEVYHNLARLY-----LRENRASKAIEFLEEKIRTGVIKDD 368
Query: 120 LAPL--------AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
A A+ A A++ D + Q L P + LG+S
Sbjct: 369 AATSYLLGSAYFALNDYAR---AALYFDR-----CIQDSQGL--PGEDYEAAVRD-LGVS 417
Query: 172 ALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ G KA+ + L S +++
Sbjct: 418 YCRMGDFSKAREVLNTLEASKGSTTHVTS 446
>gi|229592439|ref|YP_002874558.1| hypothetical protein PFLU5055 [Pseudomonas fluorescens SBW25]
gi|229364305|emb|CAY52043.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 213
Score = 39.2 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 8/163 (4%)
Query: 30 LMILSLAIWFYLFDGSHEKKKNIVGENFAQALE--LFNSNKLDDAR-SSFEKILSQDNKL 86
L+ L + + + + + Q LE L K D A+ + L +
Sbjct: 28 LLALVVVFGWQAWTKYQANQSQGASILYQQLLETTLTPDGKPDPAQVADLAGKLKNEFGG 87
Query: 87 --YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y ++++A + V G +AA +A D + A + A +L + +
Sbjct: 88 STYAQYGSLFVAKVAVDTGKLDDAAAELKAIA-DKPTNPTLGEIARQRLAQVLAAQNKAD 146
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
E K+L + E+ G ++ G+ +A +++
Sbjct: 147 EALKLLDGDA--DKAFVATREELKGDLLVQLGRTDEANAAYQK 187
>gi|225873213|ref|YP_002754672.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
gi|225792497|gb|ACO32587.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 348
Score = 39.2 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 12/183 (6%)
Query: 29 ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYN 88
+L I +A W L G + +QA + K DA + EK+ + +
Sbjct: 10 LLCISLVAAWLPLCMAQTSSAPAAPGPSLSQAQADLHHGKNADAIAVLEKLAAANPAQPG 69
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ-AASILVDTSSYEEIS 147
+ +A G A E F K + + ++Q L +
Sbjct: 70 VQHALGLA--FYRTGRLPQAKEAFEKAIAQNP-----KDIESVQLEGLTLFRMGQPKAAI 122
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
L+K + + A+ +LG+ + + A+ F A + + P S + +ILA
Sbjct: 123 PYLEKAKQWMPTANADASHVLGLCYMNAQQFDDARRAF---AAEYDLPPD-SAAAHLILA 178
Query: 208 NII 210
++
Sbjct: 179 QML 181
>gi|193211913|ref|YP_001997866.1| hypothetical protein Cpar_0239 [Chlorobaculum parvum NCIB 8327]
gi|193085390|gb|ACF10666.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327]
Length = 692
Score = 39.2 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 11/155 (7%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFE-KILSQDNKLYNPLSN---MYIASILVA 101
++ + + +A L +A + + + K ++ + I
Sbjct: 26 QQESEPKPSALYEEAQRLEGRKNYSEALDYYNRGLAADTLKGFSAEALEALCRKGRIEFL 85
Query: 102 KGDTKNAAEIFLKV---ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
G + A + + A ++R AA L A + + Y + + I++ L
Sbjct: 86 TGRYQAAFTTWQSIEAHAAAGKLSDSLRTAAGLDTAQMYAELGRYGKAASIMESLGSADQ 145
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
+ K GK+ +A +++L+ +
Sbjct: 146 WQRY----QTAVYRFKAGKIDEASQWYQKLSASGD 176
>gi|33864078|ref|NP_895638.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
9313]
gi|33635662|emb|CAE21986.1| TPR repeat:HAT (Half-A-TPR) repeat [Prochlorococcus marinus str.
MIT 9313]
Length = 829
Score = 39.2 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L +++A +S+ K + + + + + +IL KGD A + K +
Sbjct: 322 LKEEGDVEEAIASYRKAIELKPDFAD--AYLNLGNILKDKGDVGQAIASYRKAIDLKPDF 379
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKA 181
A Q + + ++ L++ L N H A + +G + + + ++A
Sbjct: 380 SE----AYYQLFLVNSHSGDHDSALIALKQCLDVDDN--HYNARQSIGHAFFQADRREEA 433
Query: 182 KTIFEELAKD 191
F A +
Sbjct: 434 IQYFSSRANE 443
>gi|322421505|ref|YP_004200728.1| hypothetical protein GM18_4034 [Geobacter sp. M18]
gi|320127892|gb|ADW15452.1| hypothetical protein GM18_4034 [Geobacter sp. M18]
Length = 674
Score = 38.8 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ +A + K ++A + ++ P +R A + + +EE ++L
Sbjct: 114 AIYRLARLYFQKDRPQDALQALERI--QGKVPEKIRDDLEFLRAQLFMANGRFEEALRVL 171
Query: 151 QKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE---ELAKDNNSPFGISTRSQMIL 206
++L + + FA LGIS + GK Q + + +LA N S I +S ++L
Sbjct: 172 KELQGAKS-LEGFAGYNLGISLWQEGKEQDGREYLDRTGQLASVNPSTQAIRDKSNLVL 229
>gi|158522424|ref|YP_001530294.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511250|gb|ABW68217.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 593
Score = 38.8 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 9/110 (8%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDD 119
L + A +++ + L+ + L++ +A++L G A + + +A D
Sbjct: 482 LAHARKGAVSAALAAYHRALALNPDF--ALAHNNLANLLADTGQIDEAIDHYRAALAADP 539
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
P AT A + E + L+K + +P +Q A + L
Sbjct: 540 GQPEFYNNLATTLA-----QSGRIPEAIQHLEK-ALAIDPEYQTARKNLA 583
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKL---YNPLSNMYIASILVAKGDTKNAAEIFL-KVAND 118
L ++ ++D+A + L+ D YN L A+ L G A + +A D
Sbjct: 518 LADTGQIDEAIDHYRAALAADPGQPEFYNNL-----ATTLAQSGRIPEAIQHLEKALAID 572
Query: 119 DLAPLAVRYAATLQ 132
A + A L+
Sbjct: 573 PEYQTARKNLARLR 586
>gi|326387782|ref|ZP_08209388.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207828|gb|EGD58639.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370]
Length = 663
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 8/105 (7%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L +K +AR + +L +D + + A+I V G+ A ++ + D L
Sbjct: 208 TLIARHKFSEARKALAPLLERDPANHAH--RIQAATIAVGLGENDAAINLYRAMLAD-LV 264
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
P A L A + + K + ++ E A E
Sbjct: 265 PTD--DGARLLRADLCLWLG---HALKTVGQVPEAVEAYRDAARE 304
>gi|260599823|ref|YP_003212394.1| cellulose synthase subunit BcsC [Cronobacter turicensis z3032]
gi|260219000|emb|CBA34355.1| Cellulose synthase operon protein C [Cronobacter turicensis z3032]
Length = 1167
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 8/129 (6%)
Query: 43 DGSHEKKKNIVGE--NFAQALELFNSNKLDDARSSFEKILSQDNKLYN--PLSNMYIASI 98
K++ E A L AR + + P + IA+
Sbjct: 625 QYQTVLKRSPASEEARLGLAEALIADGDNAAAREQLAALQTPGAGGEPRSPGTQRRIANA 684
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ--AASILVDTSSYEEISK--ILQKLS 154
A GDT A + F +A + A + AA ++ + ++
Sbjct: 685 QAALGDTARAQQAFAVLAATARTQPPSQETALVLRDAARFQRQNGQPQQALQTYRDAMVA 744
Query: 155 EPSNPMHQF 163
P
Sbjct: 745 SGIAPTRPA 753
Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 13/161 (8%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
++ E A L +S + A + + + D ++ +A +GD
Sbjct: 568 SQRLQTNELMETANRLRDSGQEAQAIALLRQQPASDRI------DLTLADWAQQRGDNAA 621
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN---PMHQFA 164
A + V A A L A L+ + L L P P
Sbjct: 622 ARAQYQTVLKRSPASEE----ARLGLAEALIADGDNAAAREQLAALQTPGAGGEPRSPGT 677
Query: 165 NEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
+ + G +A+ F LA + + ++
Sbjct: 678 QRRIANAQAALGDTARAQQAFAVLAATARTQPPSQETALVL 718
>gi|259417290|ref|ZP_05741209.1| thioredoxin domain protein [Silicibacter sp. TrichCH4B]
gi|259346196|gb|EEW58010.1| thioredoxin domain protein [Silicibacter sp. TrichCH4B]
Length = 311
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 10/155 (6%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A L + + +GE A ++ DA F IL +D+K S +
Sbjct: 122 AFLQKLAEAAGSTADGGLGEAIETAEQMLEEGAAQDAAQVFAAILGEDDKNAAAYSGLAR 181
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
+ + + D A + AP + AA ++AA ++ + E + + +L
Sbjct: 182 CHVALGELDQAEAVL--------NGAPAEISTAAEIEAAHAQIELARQAENAGPVAELRA 233
Query: 154 SEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ +NP A L + G+ + A EL
Sbjct: 234 AVDANPDDHQARFDLAQALHAAGEAEAAVNELLEL 268
>gi|108761838|ref|YP_631949.1| hypothetical protein MXAN_3767 [Myxococcus xanthus DK 1622]
gi|108465718|gb|ABF90903.1| hypothetical protein MXAN_3767 [Myxococcus xanthus DK 1622]
Length = 267
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 30/213 (14%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENF---AQALELFNSNKLDDARSSFEKILS 81
A +LIL + +AI + EK +G+ + +E + D F+ +
Sbjct: 43 AGVLILGGVGVAIASEVSKRGEEKASQALGQALTVLDRPVEGVEPAQPGDTEPPFKSVKE 102
Query: 82 QDNKLYNPLSNMYI----------ASILVAK-----GDTKNAAEIFLKVANDDLAPLAVR 126
+D + L A++ K G+ A F + +R
Sbjct: 103 RDEAVVKSLGEFRQQHGGTPAAVTAALAEGKAQFRLGNYAAAQTAFGEYLKGAAQNDPLR 162
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPM------HQFANEILGISALKFGKVQK 180
A L YE+ K +++ P + A ++ + GK ++
Sbjct: 163 AEAFEGQGYALEADGKYEDAIKAFEQMGAAGGPFLVGMGDYHKARMLILL-----GKKEE 217
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
A + +L + + LA + +
Sbjct: 218 AAQVLSKLTTTQPNTAAARQ-AGERLAVLASEG 249
>gi|82703698|ref|YP_413264.1| type II and III secretion system protein [Nitrosospira multiformis
ATCC 25196]
gi|82411763|gb|ABB75872.1| type II and III secretion system protein [Nitrosospira multiformis
ATCC 25196]
Length = 749
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 24/140 (17%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY---NPLSNMYIA--------SILV 100
F + L KLD +S E+ ++ L+ A +
Sbjct: 20 ATNNAFVEGKRLIAEGKLDTGLASLEQAARENPDNLEIRAVLARQREAIAARFVFEAEAA 79
Query: 101 AK-GDTKNAAEIF-----------LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
GD + A F +A + + R+ A ++ A L++ Y S
Sbjct: 80 RSTGDLEAAERSFRRALEINPRHERALAGLEAINMDRRHTAAIKRAEELLERGEYAAASS 139
Query: 149 ILQKLSEPSNPMHQFANEIL 168
++ + + NPM + A ++
Sbjct: 140 EVRSVLQE-NPMQRDARRLI 158
>gi|145540124|ref|XP_001455752.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423560|emb|CAK88355.1| unnamed protein product [Paramecium tetraurelia]
Length = 349
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
+ K+N + F + LEL + ++A F+K L + + Y A L G
Sbjct: 161 NTTKQNESKQYFDKGLELCTQGQFNEAIKLFDKSLEISSTNIE--AIFYKAEALRNTGAF 218
Query: 106 KNAAEIFLKVANDDLA---------PLAVRYAATLQAASILVDTS 141
+ + + + D A+R + A +L D +
Sbjct: 219 EKSIAEYDRCMKFDSDEKLEYNFGKGEALRALERYEDAILLFDRA 263
>gi|206603461|gb|EDZ39941.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
'5-way CG']
Length = 327
Score = 38.8 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 12/138 (8%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
++A F ++ D + + + + +G A + + +
Sbjct: 168 EQGHFEEAERYFLELAEMDP-AHPRVHQLL-GLLYSEQGKWDEAIMEWEEAMEIAPSDEV 225
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA-KT 183
+R L E +L++ + NP++ A LG + K + A +
Sbjct: 226 LREL-----GWTLNMAGEKEAAISMLEE-ALDLNPLNLQARIDLGSVLMDQEKFESAIRE 279
Query: 184 IFEELAKDNNSPFGISTR 201
E+AK+ + P + R
Sbjct: 280 W--EIAKNQD-PENKTIR 294
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
+ A + + + L + R L A L T + ++L +L +P++ A
Sbjct: 102 EEALALGKSLLKESLTSMEKRDV-LLHTAFSLHGTGELRKAVRMLNELL-DEDPLNTDAL 159
Query: 166 EILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQMILANI 209
E LG + G ++A+ F ELA+ D P R +L +
Sbjct: 160 ETLGKIYFEQGHFEEAERYFLELAEMDPAHP-----RVHQLLGLL 199
>gi|15233142|ref|NP_191058.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|75210358|sp|Q9SV46|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 38.8 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L N L +A+ + ++++ N + + + + L + A E+ +
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREE-KPAEALEVLSRAIERGAE 265
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQK--LSEPSNPMHQFANEILGISALKFGKVQ 179
P ++ Y+ +QA +D + + + +++ L PS + + ++++K G +
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTS----VILASVKQGNMD 321
Query: 180 KAKTIFEELAKDN 192
A + +E+ D
Sbjct: 322 DAIRLKDEMLSDG 334
>gi|332020413|gb|EGI60833.1| Alpha-1,3-mannosyl-glycoprotein
4-beta-N-acetylglucosaminyltransferase B [Acromyrmex
echinatior]
Length = 1048
Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 97 SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
+++ + A F+K+ ++ LQ A + D + Y + + K +
Sbjct: 351 TMMSETQQYQKAHNYFIKIIKKHSDDTSM-SLVYLQRAFLQFDWNDYSDKAVEYLKKAIE 409
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ + A E LG +K G +++A +F++
Sbjct: 410 LDEKCRSAYEALGFVEIKRGNIEEAIRLFDK 440
>gi|296387383|ref|ZP_06876882.1| thioredoxin [Pseudomonas aeruginosa PAb1]
Length = 289
Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A LF ++ DA ++ + +L+++N P + + A L +G+ + A I
Sbjct: 121 DPLEVAQALFAEGRIGDAEATLKALLAENNDN--PAALILYARCLAERGELEEAQAILDA 178
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
V +D+ A L D E+ L + +Q A + L +
Sbjct: 179 VKSDEHKQALAGARAQLTFLRQAADLPDSAELKSRLAADAGDDEAAYQLAVQQLARQQYE 238
Query: 175 F 175
Sbjct: 239 A 239
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ ++L L + +A F++++ +D+ L+++ A + A EIF KV
Sbjct: 912 YMKSLSLLRLGRYKEAEVGFKEVIFRDSDNAEALAHLSTACFKQEH--YEEALEIFEKVL 969
Query: 117 NDDLA--PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+ + R L+A + D+ ++ L+ +A E G + +
Sbjct: 970 SQTPERKTVLFRKGVALKALGKIQDSLDIFDLVLKLKPDCS-------YALEQRGYALFE 1022
Query: 175 FGKVQKAKTIFEE 187
G+ +A F+E
Sbjct: 1023 LGRYGEAAEAFKE 1035
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 16/139 (11%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L K ++A EK+ + + L + IA L+ G + A EIF +
Sbjct: 1179 ASALIELGKPEEALLPLEKLAREGSASKETLYDRGIA--LLELGRQEEAFEIFSDLI--- 1233
Query: 120 LAPLAVRYA--ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI------LGIS 171
A +L YEE K L++ E+ +G+S
Sbjct: 1234 ---EIYPDFKKAWYGKGLVLFSQEHYEEALKALKQAVPDGEESKIGEPELEDALTKIGLS 1290
Query: 172 ALKFGKVQKAKTIFEELAK 190
LK GK + A FE++ +
Sbjct: 1291 QLKTGKYEDACDTFEKVLE 1309
Score = 36.1 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 7/131 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
Q L L + K ++A ++ EK+L D + ++L G + A K
Sbjct: 272 LQQGLLLARTGKHEEALNALEKLLEYDPDF--TEAQKLRGTVLAGLGRFEEALGPLEKSL 329
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ + LQ IL+DT E + + NP ++ +G +
Sbjct: 330 EKEPENYNL----WLQKGLILLDTGKLEPAIDAFEN-AARLNPDNETCWMNMGFALYSLE 384
Query: 177 KVQKAKTIFEE 187
+ ++A F+E
Sbjct: 385 RYEEALEAFKE 395
>gi|297170599|gb|ADI21625.1| hypothetical protein [uncultured myxobacterium HF0130_06F04]
Length = 1249
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD-TKNAAE 110
G F A EL ++K D+A + + ++ ++ N + + A++ K +A +
Sbjct: 683 RTGAQFLVASELATADKHDEASALYVALVDENPTYANCDAALNNAAVSFEKSQRFDSAMK 742
Query: 111 IFLKVAND 118
++ ++ +D
Sbjct: 743 MYQRIVDD 750
>gi|290981898|ref|XP_002673668.1| hypothetical protein NAEGRDRAFT_71180 [Naegleria gruberi]
gi|284087253|gb|EFC40924.1| hypothetical protein NAEGRDRAFT_71180 [Naegleria gruberi]
Length = 1197
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 25/143 (17%)
Query: 68 KLDDARSSFEKILSQDNKL----YNPLSN-------MYIASILVAKGDTKNAAEIFLKVA 116
LD AR F +I Y L +++A I +G A+++F+K
Sbjct: 609 NLDIARKCFNRIEDTKFISLIDKYEKLIKQNQFNRDLFVAEIHAYQGKFDEASKMFVKGG 668
Query: 117 NDDLAPLAVRYAATLQAA---SILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
D+A + + A +I D + ++ + +E A E+ +
Sbjct: 669 RADMAMDMLCDLRKWKEAKDLAITYDNINLTDMILRQARTAEEDTDHR-SAAELYAAA-- 725
Query: 174 KFGKVQKAKT------IFEELAK 190
G +KA F+ L +
Sbjct: 726 --GNYEKAIQIMGDNKWFDMLQE 746
>gi|150397854|ref|YP_001328321.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae
WSM419]
gi|150029369|gb|ABR61486.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae
WSM419]
Length = 634
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 25/146 (17%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L L + + ++A F + L+ D LY +N+Y L A+G + A F + A
Sbjct: 431 LALNHDGQTEEASREFRQALALDPSLYE--ANLYYGRFLFAQGRFQEAIGFFERAAEIRS 488
Query: 121 AP------------LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
R A + A I ++ ++ + L++ E ++P H L
Sbjct: 489 DDYFSPIHLMGCHLSLGREAERQRWARIGIERAT-----RALERNPENASPAH---RGAL 540
Query: 169 GISALKFGKVQKAKTIFE-ELAKDNN 193
++ + G+ ++AK LA D +
Sbjct: 541 ALAHM--GEAERAKEWVSRALATDPD 564
>gi|116623288|ref|YP_825444.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226450|gb|ABJ85159.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 402
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 12/150 (8%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
G A L K+ DA F K + K L + +A + G T A
Sbjct: 145 AKSSGAQLGMARALVQEGKVADAEVYFRKAAELEPKYREYL--LQLAGLYEKGGQTAEAI 202
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
I+ + + A + +L++ +E+ L++ L
Sbjct: 203 AIYREFPENGA--------AQARLGELLLEERKFEDAVPRLEEAYGKDPS--PGNRSALA 252
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ + K+ KA + E+ + +
Sbjct: 253 AAYVFTRKLDKALPLLEQCVAAAPADYDTR 282
>gi|300312067|ref|YP_003776159.1| tetratricopeptide TPR_4 containing protein [Herbaspirillum
seropedicae SmR1]
gi|300074852|gb|ADJ64251.1| tetratricopeptide TPR_4 containing protein [Herbaspirillum
seropedicae SmR1]
Length = 924
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
N+ + AR FE +L+ D K ++ + A++ G + A + + N++ P
Sbjct: 516 LKDNQPELARKRFEAVLATDKKSIPAMTAL--ATLAERNGHPQEATQWLERAVNEN--PE 571
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+V+ +A L A +L D + S P + + A E+LG + G Q A
Sbjct: 572 SVQASAQLIARYLLTDQKEKGLTMARKLQASNPGDAV---ALEMLGQAQFASGDTQGALA 628
Query: 184 IFEELAK 190
++ LA
Sbjct: 629 SYQRLAT 635
>gi|224826451|ref|ZP_03699553.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
gi|224601552|gb|EEG07733.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
Length = 209
Score = 38.8 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 6/174 (3%)
Query: 13 KCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDA 72
K + KWI+ ++ L + + + + + + + L
Sbjct: 15 KAFWAQWG-KWISAAVLAAALGY-LGTKGWTYYQQSQAEKASAVYDEVAGAAQAGDLAKM 72
Query: 73 RSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATL 131
+SS + S Y + + A K D A A P A++ A L
Sbjct: 73 KSSMAVLQSDYGRTAYASRAALLAAKTAFDKQDLALAKSQLTWAAEHAKEP-ALQAVARL 131
Query: 132 QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
+ A++L+D Y+ L + + ++ G G + A+ +
Sbjct: 132 RLAAVLLDEKRYDAAIAELNQEHV--SAYDALFLDLKGDVYAAKGDSKAARDQY 183
>gi|20093095|ref|NP_619170.1| TPR domain-containing protein [Methanosarcina acetivorans C2A]
gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1079
Score = 38.8 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-V 115
+ + L + ++A ++K L + + + L M ASI G ++ A + + +
Sbjct: 681 YEKGSALDKLGRSEEALECYKKALEINPQSSDALYGM--ASISNTLGRSEEAIAYYDQLL 738
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
A + P A++ + LV+ YEE + L E + + A + S K
Sbjct: 739 AANASDPEALQGKSQ-----ALVNLGRYEEAVECFNPLLELESE-NIEALDGRAFSLTKS 792
Query: 176 GKVQKAKTIFEELAK-DNNSPFGISTRSQM 204
G+ ++A ++ + + + ++ ++ ++ +
Sbjct: 793 GRQEEALEDYDRILQLEPSNSKAMTEKASL 822
>gi|53804652|ref|YP_113528.1| TPR domain-containing protein [Methylococcus capsulatus str. Bath]
gi|53758413|gb|AAU92704.1| TPR domain protein [Methylococcus capsulatus str. Bath]
Length = 586
Score = 38.8 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 11/155 (7%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
FA AL N + A S E+ L + + A ++ GD+ A ++ +
Sbjct: 201 FAAALLAANQGEFQQALSETEEALKLHPDWGR--ARVLQAQVMAQMGDSATAGDLIQRAL 258
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
D +R L + L+ + E + L+++ P +Q A LG++ + G
Sbjct: 259 KRDPDNARLR----LIYSQFLIKSGDIEGARRELERI-VAKEPGNQDARFGLGLALIDLG 313
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
++ A+ F LA + ++ L I A
Sbjct: 314 RLDAARREFAALA----ASEKWRVQAYFYLGLIDA 344
Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 7/137 (5%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
QA + A ++ L +D + + L+ GD + A ++
Sbjct: 234 RVLQAQVMAQMGDSATAGDLIQRALKRDPDNARL--RLIYSQFLIKSGDIEGARRELERI 291
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ A L+D + + L+ A LG+ +
Sbjct: 292 VAKEPGNQD----ARFGLGLALIDLGRLDAARREFAALAASEK-WRVQAYFYLGLIDARK 346
Query: 176 GKVQKAKTIFEELAKDN 192
G++ +A F+ +
Sbjct: 347 GRLNEALDWFDRVTTGP 363
>gi|317154918|ref|YP_004122966.1| tetratricopeptide domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316945169|gb|ADU64220.1| Tetratricopeptide repeat protein [Desulfovibrio aespoeensis Aspo-2]
Length = 1039
Score = 38.8 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV-AND 118
A L + + D++ + + + + L + A +L A F + A D
Sbjct: 493 AENLAYARRFDESLNRLDGLATDFPDSSKVL--LTRARVLAWAKRYDEAIAAFEALHAAD 550
Query: 119 DLAPLAVRYAAT 130
P+ +R A
Sbjct: 551 PADPVPLREMAR 562
Score = 34.6 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
++ D + + +G+ F S ++ +A +++++ ++D P ++ +A
Sbjct: 114 YHTLDQNDPRVAGGLGDAFFA------SGRMAEAATAYQR--ARDAGSQRPDLSLRLAQA 165
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAV-----RYAA------TLQAASILVDTSSYEEIS 147
+ G + AA + ++ A + + R A +A + ++ + +
Sbjct: 166 MAWSGQAERAAPLLAELHAAHPADVEIALLYSRALAQAGDTRRARAVLDQLAAAAPDNAT 225
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ + + H A + A+K ++A+ ++
Sbjct: 226 LLFELADLEAALGHASAARKYAMQAVKADDTRQARLRLAQV 266
>gi|319789531|ref|YP_004151164.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
ammonificans HB-1]
gi|317114033|gb|ADU96523.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
ammonificans HB-1]
Length = 914
Score = 38.8 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 60 ALELFNSNKLDDARSS-FEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
A+ S KLD A+ + S + A+I +GD +A +LK+A D
Sbjct: 792 AILAQESGKLDLAKKLILQARKKAVKPEQVVESTFWKAAIEAQQGDIDDAIIDYLKIAYD 851
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
A +AA + Y + K+ +K++
Sbjct: 852 YSKYEPWASTALYRAAQLFEQKGDYRQALKLYEKVA 887
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY---NPLSNMYIASILVAKGD 104
K + +V F +A +DDA + KI D Y + A + KGD
Sbjct: 817 KPEQVVESTFWKAAIEAQQGDIDDAIIDYLKIA-YDYSKYEPWASTALYRAAQLFEQKGD 875
Query: 105 TKNAAEIFLKVAN 117
+ A +++ KVA
Sbjct: 876 YRQALKLYEKVAK 888
>gi|329119499|ref|ZP_08248184.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464432|gb|EGF10732.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 390
Score = 38.8 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 4/147 (2%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
K+ I+ F ALE A + + Y N+ +A + ++G+
Sbjct: 36 KQAKILPAAFYCALEALVDRNSGKAARELAEAADTQPQSYEL--NLTLAKLYRSRGENDK 93
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
AA + K+A D + R A L + ++ + ++ + E N A E
Sbjct: 94 AARLLQKLA-DSPDTVGGRKEAVLFELGLTYQSAGLVDRAEQIFLSLENGNTAKG-ARER 151
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNS 194
L + +KA + L+ D +
Sbjct: 152 LLNIYQQDRDWEKAVAAAQALSHDEQT 178
>gi|163851674|ref|YP_001639717.1| thioredoxin domain-containing protein [Methylobacterium extorquens
PA1]
gi|163663279|gb|ABY30646.1| Thioredoxin domain [Methylobacterium extorquens PA1]
Length = 302
Score = 38.8 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ + + +A + ++ L A + +L ++ + ++ + A + G+T++A +
Sbjct: 128 SEIDQVLEEAAAVASAGDLPAASELYAAVLREEPENLKAIAGL--AKTQLELGETESAKQ 185
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ D A ++AA L + + +++ + +++ N A L
Sbjct: 186 VLAMAPADKADDPLF---AGVRAALELAEQAGTLGDLAALQKRIEADPNDFQ--ARFDLA 240
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ GK ++A +A+ + S + R Q++
Sbjct: 241 LGLNAAGKREEAVDQLVAIARADRSWNEDAARKQLLQ 277
>gi|256829994|ref|YP_003158722.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
DSM 4028]
gi|256579170|gb|ACU90306.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
DSM 4028]
Length = 884
Score = 38.8 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 59/147 (40%), Gaps = 15/147 (10%)
Query: 47 EKKKNIVGENFAQALELFN----SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
EK + + + L L +AR +K+L+QD + + L + A + +
Sbjct: 151 EKALAVEPDRISAKLGLVQIFMIQGDRAEARKMLDKLLAQDPENRSGLHAL--AQLEAQE 208
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPM 160
D + + + ++++ + L A + S+L++ E++ + + P +
Sbjct: 209 KDPEAMLDAYSRISSIYPSDL----FARYKQGSLLMNKGEGEKVRVSAEAMLSEYPDSAE 264
Query: 161 HQFANEILGISALKFGKVQKAKTIFEE 187
++G+ + GK +A T +
Sbjct: 265 GH---RLMGLYLFREGKFDEAATYLSK 288
Score = 35.7 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 8/164 (4%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ + EK N V + L + K+D A F+K+L Q+ Y+ N + I
Sbjct: 48 YKNALEKDPNFVAARYNLGLAYIETGKMDQAEREFQKVLLQNP--YDGRVNFQLGRIANF 105
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+ A + + + A + A + L+K + P
Sbjct: 106 QNKPAVAVPLIMAYLQEHPDDAAALEQLAISATI----SGDPASAKGHLEK-ALAVEPDR 160
Query: 162 QFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPFGISTRSQM 204
A L + G +A+ + ++ LA+D + G+ +Q+
Sbjct: 161 ISAKLGLVQIFMIQGDRAEARKMLDKLLAQDPENRSGLHALAQL 204
>gi|28564904|gb|AAO32536.1| TOM70 [Naumovia castellii]
Length = 590
Score = 38.8 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 21/172 (12%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALEL---------------FNSNKLDDARSSFEKILSQ 82
+ ++ GE+F +A EL + NK DD + F + +
Sbjct: 372 YHRGQMYFITQQYEKAGEDFDKAKELDPENIFPYIQLACLSYRENKFDDCETLFSE-ARR 430
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPLAVRYAATLQA-ASILVDT 140
+ + N Y A IL KGD A + + + + A L A++LV T
Sbjct: 431 KFPNSSEVPNFY-AEILADKGDFDAALKEYERAIELEKKQDAVHVGIAPLVGKATLLVRT 489
Query: 141 SSYEEISKILQKL--SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ E + L + +P + A LG L+ + +A +FE A
Sbjct: 490 PTVENFVEATSLLEEAVKEDPRSEQAKISLGQLKLQQEDIDEAIELFESAAT 541
>gi|295398572|ref|ZP_06808604.1| tetratricopeptide repeat family protein [Aerococcus viridans ATCC
11563]
gi|294973173|gb|EFG48968.1| tetratricopeptide repeat family protein [Aerococcus viridans ATCC
11563]
Length = 434
Score = 38.8 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
A + +G+ + A ++ ++ + P ++ A T +EE ++++ +
Sbjct: 148 AELRFQQGEFQQALPLYERLLQSEETPESLFETIEAHFAYAKAATGDFEEAIELIE--AT 205
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
P N E L ++ +KA TI E L +D+ G+
Sbjct: 206 PENDRTDEQQEQLAFYYVETENFEKANTILEALYEDDKLSDGL 248
>gi|291570132|dbj|BAI92404.1| probable transglycosylase [Arthrospira platensis NIES-39]
Length = 730
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN--MYIASILVAK 102
S +N F A +L + + ++A +++ Y L+ + + ++ +
Sbjct: 73 SRTTSENRDRARFLLAADLLEAGQPEEALEQLDRLERS----YRVLAGHILKMRALAYQQ 128
Query: 103 -GDTKNAAEIFLKVANDDLAPLAV 125
GDT A+ + + + V
Sbjct: 129 LGDTAKASLSWKALVDGHPEDPVV 152
>gi|221056686|ref|XP_002259481.1| Erythrocyte binding protein [Plasmodium knowlesi strain H]
gi|193809552|emb|CAQ40254.1| Erythrocyte binding protein, putative [Plasmodium knowlesi strain H]
Length = 3013
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 63/199 (31%), Gaps = 20/199 (10%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSF--------EKI 79
I ILS + K + + +A+ + K A+++ K
Sbjct: 2435 AIAAILSRKAVAAFAERKERKARAALLAK--EAVATTKARKERKAQAALLAKEAVATTKA 2492
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ L+ +A+ K AA + + A R +AA +
Sbjct: 2493 RKERKAQAALLAKEAVATTKARKERKAQAALLAKEAVATTKA----RKERKARAALLA-- 2546
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ ++ ++ + A E + + + + +A + +E +
Sbjct: 2547 KEAVATTKARKERKAQAA----LLAKEAVATTKARKERKAQAALLAKEAVATTKARKERK 2602
Query: 200 TRSQMILANIIASDQRNKK 218
R+ ++ +A+ + K+
Sbjct: 2603 ARAALLAKEAVATTKARKE 2621
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 66/224 (29%), Gaps = 33/224 (14%)
Query: 7 ANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNS 66
+ K A LL ++ E+K +A+ +
Sbjct: 2482 LAKEAVATTKARKERKAQAALLAKEAVATT------KARKERKAQAALLA-KEAVATTKA 2534
Query: 67 NKLDDARSSF--------EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
K AR++ K + L+ +A+ K AA + +
Sbjct: 2535 RKERKARAALLAKEAVATTKARKERKAQAALLAKEAVATTKARKERKAQAALLAKEAVAT 2594
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
A R +AA + + ++ ++ + A E + + + +
Sbjct: 2595 TKA----RKERKARAALLA--KEAVATTKARKERKAQAA----LLAKEAVATTKARKERK 2644
Query: 179 QKAKTIFEELAKDNNSPFGIS-TR---SQMILANIIASDQRNKK 218
+A LAK+ + R + ++ +A+ + K+
Sbjct: 2645 AQA----ALLAKEAVATTKARKERKAQAALLAKEAVATTKARKE 2684
>gi|322435530|ref|YP_004217742.1| hypothetical protein AciX9_1916 [Acidobacterium sp. MP5ACTX9]
gi|321163257|gb|ADW68962.1| hypothetical protein AciX9_1916 [Acidobacterium sp. MP5ACTX9]
Length = 437
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 37/147 (25%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
+L L + + +A + + +Q Y L + A++ KGD A I+ +V D
Sbjct: 280 SLFLRHDGRYAEALAMQHGLATQFPHDY--LFRLEEANLTKDKGDGPGAIAIYKQVLADA 337
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG--K 177
P LQ A G++ + G
Sbjct: 338 HKPGYFADP-RLQMAW--------------------------------FGLADTERGQND 364
Query: 178 VQKAKTIFEELAKDNNSPFGISTRSQM 204
+ A + E A N+ I R+ +
Sbjct: 365 IADAAKHYLEAANQPNASDWIRKRANL 391
>gi|256376883|ref|YP_003100543.1| hypothetical protein Amir_2764 [Actinosynnema mirum DSM 43827]
gi|255921186|gb|ACU36697.1| TPR repeat-containing protein [Actinosynnema mirum DSM 43827]
Length = 683
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 7/139 (5%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+ A + F K+L D + + A + GD A +R
Sbjct: 516 GDAEGALAEFTKVLELDPAHQE--ARLSRAELRCDLGDHAGALADVEAGLALSPDNPMLR 573
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
A+ L D + ++ +++ L+ ++P A I + G++ +A F+
Sbjct: 574 CV----QATALADAGAPDQARTLIESLTT-THPTCAQAWAIRARLEYESGELPQALADFD 628
Query: 187 ELAKDNNSPFGISTRSQMI 205
E + ++P R+ ++
Sbjct: 629 ESVRLLDAPEVRYNRALVL 647
>gi|223992621|ref|XP_002285994.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977309|gb|EED95635.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1177
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 9/132 (6%)
Query: 65 NSNKLDDA----RSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
KLD + R + + + S N L + +A+ ++A+ D A ++ +A
Sbjct: 833 EEGKLDQSIKSFREALKAVESSGNDLLKANIMLNMANAMMARCDFDKAIALYDDLAEKPS 892
Query: 121 A-PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE----ILGISALKF 175
Y A + +L+ EE IL +L+ + + LG ++
Sbjct: 893 LRGSKEHYLALFNKSLLLLKKGDNEEAKLILGELTSRRSSVTPDVKGGVYLTLGNISVSE 952
Query: 176 GKVQKAKTIFEE 187
G + +A F+
Sbjct: 953 GNIPEALEFFDM 964
>gi|226942820|ref|YP_002797893.1| Thioredoxin protein [Azotobacter vinelandii DJ]
gi|226717747|gb|ACO76918.1| Thioredoxin protein [Azotobacter vinelandii DJ]
Length = 289
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 2/125 (1%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ A LF + ++ + + +LS+DN L + A L +G+ A
Sbjct: 117 APEADPLEVAQALFAAGRIGETENLLAALLSEDNGNGAAL--ILYARCLAERGELGEAEA 174
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
+ V D+ A L D + L + + +Q A + L
Sbjct: 175 VLDAVTGDEHKQALAGARAQLTFLRQAADLPEVAILKSRLAQDANDDEAAYQLAIQQLAR 234
Query: 171 SALKF 175
+
Sbjct: 235 QHYEA 239
>gi|109897390|ref|YP_660645.1| tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
gi|109699671|gb|ABG39591.1| Tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
Length = 447
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 16/213 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIV-----GE 55
M+ NN +S + +G I + + +++ D E ++ +
Sbjct: 1 MKLNNKKSSNLSRQVLGLALCAVIGLGINVTPVAMKNAQAQEDSQRETRRTPALRVKVYD 60
Query: 56 NFAQALELFNSNKLDDARSSFEKI--LSQDNKLYNPLSNMYI--ASILVAKGDTKNAAEI 111
++A +L + K D+A + + + + Y L+ MY I A
Sbjct: 61 QLSRAQKLADEGKTDEALEALDNVKGKASSMNSYE-LAMMYNFYGFIYYNVERFDEAIAS 119
Query: 112 FLKVANDDLAPLAVR-----YAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFAN 165
F V P + A L D T ++ E + L P++ +
Sbjct: 120 FETVVEQQPIPESFELSTLFSLAQLHMMRGNFDKTVAFLERWETLNASVNPNSEIPAKNY 179
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+ + + KA + E+ + + I
Sbjct: 180 VLKAQAMYQQKSYDKAASYIEKAIEIVEAQDDI 212
>gi|300704934|ref|YP_003746537.1| tad secretion system, pilus assembly protein [Ralstonia
solanacearum CFBP2957]
gi|299072598|emb|CBJ43948.1| Tad secretion system, pilus assembly protein [Ralstonia
solanacearum CFBP2957]
Length = 325
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
++ + + ++L ++ + +D SH + + AL + D++ +++L+
Sbjct: 7 GFVLSVFVAIVLGVSGLYLWWDSSHSQTAKRFSQRLKMALLSSARHGGDESILK-QRVLA 65
Query: 82 QDNKLYNPLSNM 93
+ ++ L +
Sbjct: 66 ESPEVAAMLGRL 77
>gi|222110305|ref|YP_002552569.1| hypothetical protein Dtpsy_1092 [Acidovorax ebreus TPSY]
gi|221729749|gb|ACM32569.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
Length = 225
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 9/156 (5%)
Query: 3 SNNDANSYKGKCKMGKCCY----KWIAPLLILMILSLAIW--FYLFDGSHEKKKNIVGEN 56
+NN + + + K + I +LI+++ LA W + L+ G ++ + E
Sbjct: 2 ANNFDLQEQEQLEQIKHFWNTWGTPITWVLIVIMGGLAAWNGYRLWQGRQAQQATALAEA 61
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A++ + +++ A + + A K D + +
Sbjct: 62 VEMAVQAGDLARVEQAVGDLKSSYGGTAQAGQAGLLAAKALADAGKWDAAKSTLAW---V 118
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
+ + + A L+ AS+L++ +Y+E S L
Sbjct: 119 AEKASDEGYQALARLRLASVLIEQKAYDEASAQLSG 154
>gi|319941510|ref|ZP_08015837.1| hypothetical protein HMPREF9464_01056 [Sutterella wadsworthensis
3_1_45B]
gi|319804984|gb|EFW01823.1| hypothetical protein HMPREF9464_01056 [Sutterella wadsworthensis
3_1_45B]
Length = 212
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 3/125 (2%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+ ++ + L+ A W ++ + + +A ++ L + +S ++S
Sbjct: 23 TPVTSVVCVCCLAFAGWN-GWNWWQRNQAAKASQIYAALQNAVATHDLKNVQSLSAGLIS 81
Query: 82 Q-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
+ + LY PL+ A GD +A V P A ++ A +L D
Sbjct: 82 EYSSTLYAPLAAFASAQSASDAGDLADAKAKLNWVIEKSGRPE-YDTVARVRLAGVLFDE 140
Query: 141 SSYEE 145
+E
Sbjct: 141 GKLDE 145
>gi|198423400|ref|XP_002130572.1| PREDICTED: similar to Tetratricopeptide repeat protein 35 (TPR
repeat protein 35) [Ciona intestinalis]
Length = 293
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
+A+EL + D+A ++++ +D IL AKG +A + +
Sbjct: 85 LRAMELEAKGQFDEAMEVYKELEKEDPTNAAI--RKRKIVILKAKGSYGDAIKSLVLYLQ 142
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
+A A L+ A + + + Y++ + +++L SNP + ++ G
Sbjct: 143 TFMADHD----AWLELAELYIKYNDYDKAAFCMEELLL-SNPFNHLYHQRYAEIKYTQGS 197
Query: 178 VQKAKTIFEE 187
A+ F +
Sbjct: 198 RDVARQYFAQ 207
>gi|119505387|ref|ZP_01627461.1| hypothetical protein MGP2080_14264 [marine gamma proteobacterium
HTCC2080]
gi|119458842|gb|EAW39943.1| hypothetical protein MGP2080_14264 [marine gamma proteobacterium
HTCC2080]
Length = 221
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 57/159 (35%), Gaps = 7/159 (4%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGE---NFAQALELFNSNKLDDARSSFEKILSQD 83
+++ ++ + + + G ++ + + AL+ + +D R+ +
Sbjct: 27 AAVVLAVAGTVGWQQYQGWSSQQAELASDTWGAIEVALQSGDDRSTEDVRALAGALKDDF 86
Query: 84 NK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
++ +Y + + +A++ V +G+ A + A + L+ A +L D
Sbjct: 87 SRTVYARFAALQLAALAVEEGNLDAAESELRWALAKEDANSELGQLIQLRLARVLADKGD 146
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+IL + A G + G+ +A
Sbjct: 147 TATALEILNSGMGAYPAAYATAK---GDIYVSEGRHAEA 182
>gi|39997647|ref|NP_953598.1| putative lipoprotein [Geobacter sulfurreducens PCA]
gi|39984539|gb|AAR35925.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
gi|298506587|gb|ADI85310.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
Length = 242
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFL 113
+ + +A L+++N A +F+ L++ Y + +I ++ D A + F
Sbjct: 119 DAYLKAFGLYSANNFAGAVEAFQAFLAEHPDSEYAGNALYWIGECHYSRSDLPRALDAFR 178
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGIS 171
VA A V A L++ L E +IL+ L+ P +P A E L ++
Sbjct: 179 LVAERYPASTKVPD-ALLKSGYTLYAMKEPERAREILESLAAKYPRSPAAAKARERLAVA 237
>gi|299771615|ref|YP_003733641.1| hypothetical protein AOLE_16905 [Acinetobacter sp. DR1]
gi|298701703|gb|ADI92268.1| hypothetical protein AOLE_16905 [Acinetobacter sp. DR1]
Length = 232
Score = 38.8 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 8/192 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFD---GSHEKKKNIVGENF 57
M +++ K K I+ +LI +I + W Y + + + V +
Sbjct: 1 MSLSDEEQFDSLKSFAKKYGSAMISGILIALI-AFFGWTYWQKKNLATSQVETAKVQQLM 59
Query: 58 AQALELFNS-NKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKV 115
+A ++ N L +S +KI+ D + + +A + K D A + KV
Sbjct: 60 DEANASADNPNALSSVTASADKIVKDDIDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKV 119
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
N + + L+ A + + Y+E K L +P E+ G +
Sbjct: 120 ENSKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGNVDP--AFKATVEELRGDIFVAK 177
Query: 176 GKVQKAKTIFEE 187
V AK ++
Sbjct: 178 KDVDSAKKAYQA 189
>gi|145346134|ref|XP_001417548.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577775|gb|ABO95841.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 689
Score = 38.8 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 6/96 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ A N N D A K D Y M A++ GD K A E V
Sbjct: 70 YRMASLAVNVNNKDYAIHCLAKAARSDPHNYEN--KMDQATLYSELGDAKKAIEQLEWVL 127
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSY-EEISKILQ 151
DDL PL A L+ A +L+ Y ++ +
Sbjct: 128 KDDLPPL---DGAILRDAVVLLAKLYYSADMRDKAE 160
>gi|91200490|emb|CAJ73538.1| similar to N-acetylglucosaminyltransferases (O-GlcNAc transferase)
[Candidatus Kuenenia stuttgartiensis]
Length = 568
Score = 38.8 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 24/156 (15%)
Query: 51 NIVGENFAQALEL---------------FNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
N + F AL+L +A +S EK ++ N + ++ +
Sbjct: 276 NEAKDAFETALKLRADFAEAHYNLGLILSKEGNSKEAIASLEKAIAISNAIAP--AHFKL 333
Query: 96 ASILVAKGDTKNAAEIFLKV-ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
I A + ++D A L A VD S K +
Sbjct: 334 GEIYTKINMPDKALSAYESAFSDDPSYEEAYYNYGELAAEIGDVDK------SIRAWKKT 387
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
NP + A LG++ GK+ A +++ ++ +
Sbjct: 388 IEINPTNTDAYFNLGVALYNQGKIDNAISMWSKVLE 423
Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F + L+N K+D+A S + K+L + Y L+N+ A AKG A + + K+
Sbjct: 399 FNLGVALYNQGKIDNAISMWSKVLETNPDDYTTLNNL--ADAYEAKGSIDKAIKTWEKIV 456
Query: 117 NDDLAPLAV 125
V
Sbjct: 457 EGHPVNSLV 465
>gi|109899429|ref|YP_662684.1| TPR-like domain-containing protein [Pseudoalteromonas atlantica
T6c]
gi|109701710|gb|ABG41630.1| putative membrane-associated protein with TPR-like domain
[Pseudoalteromonas atlantica T6c]
Length = 207
Score = 38.8 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 10/178 (5%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEK--KKNIVGENFAQALE 62
+ K + I +L L + + E+ K F
Sbjct: 7 EEQQVEAIKRFWKENGTAIIVGA----VLGLGGLWGWRYYNDEQIAAKEQASAAFETQTA 62
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+ + ++ I + Y L +A + + D A + A + +
Sbjct: 63 ALQAQDTNFGQAK-AYIDENSDTGYAVLMAFQLAQQAIDRKDLNEAEKQLSFAAANSESD 121
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
AV A L+ A + + E+ + K++ + + EI G +K G K
Sbjct: 122 -AVNALANLRLARVQLALEQPEKALASVDKVT--TTAFNAQQQEIKGDIYVKQGMFDK 176
>gi|270264222|ref|ZP_06192489.1| cellulose synthase subunit [Serratia odorifera 4Rx13]
gi|270041871|gb|EFA14968.1| cellulose synthase subunit [Serratia odorifera 4Rx13]
Length = 1146
Score = 38.8 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 20/185 (10%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI-LSQDNKLYNPLSN------- 92
LF +K+++ + +A AL L S++ A + + +Q N L+
Sbjct: 509 LFSRLAQKQRDNPQQAYAYALYLSGSDRDRQALAQLNTLPAAQWNDNMRELAQRLKMQAM 568
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
+ A L A GD A + D L + A + + Y+ +
Sbjct: 569 LEQAERLRAAGDEPGAVAYLRRQPADTRIDLQLADWALARGEYDAA-LADYQRVRAR--- 624
Query: 153 LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
P + A + + GK+ +A+ + + +P S + + A
Sbjct: 625 -----EPNNPDARLGEIEAYVAQGKLSEARQRLQ---TEPQAPEPSSNSGRRMANAWYAV 676
Query: 213 DQRNK 217
+ K
Sbjct: 677 GEPQK 681
>gi|269218202|ref|ZP_06162056.1| putative ATP/GTP binding protein [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212330|gb|EEZ78670.1| putative ATP/GTP binding protein [Actinomyces sp. oral taxon 848
str. F0332]
Length = 637
Score = 38.8 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 27/171 (15%)
Query: 60 ALELFNSNKLDDARSSFEKILS--------QDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
AL + + A ++E + + + L+N+ A + GD + A I
Sbjct: 335 ALAHRETGETMKAIDAYEALFAERLRALGPDHPDTLDTLANLAEA--HMETGDFEGAVGI 392
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLS-------EPSNPM 160
+A D L A TL A + T ++ +L+ P +P
Sbjct: 393 LETLAADQTRVLGPDDAGTLGTRGNLAESYLQTGRTQQAIDLLKGFVRDVDRALGPDHPY 452
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMI 205
L + + GK +KA+ L D + P ++ RS +
Sbjct: 453 TLTTRNRLARAYMDAGKFKKARKELNALLPDRIRVLGPDHPDTLAVRSNLA 503
>gi|46201076|ref|ZP_00207958.1| COG3118: Thioredoxin domain-containing protein [Magnetospirillum
magnetotacticum MS-1]
Length = 310
Score = 38.8 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A+A ++ A F +IL + + ++ + I V G T+ A + +
Sbjct: 140 DYIAEARQVLEEGDPQTAAGIFNQILQEAPDNASAMAGLLRCLIAV--GQTEQAESMLKR 197
Query: 115 VANDDLAPLAVRYAAT-LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+A + + AT L+ A E+ + L ++ A L ++
Sbjct: 198 LAPEIARHADIMAVATALELARHAGGVGEAAELRRRLAANADD-----HQARYDLALAYY 252
Query: 174 KFGKVQKAKT 183
G+ + A
Sbjct: 253 AGGETEAAVD 262
>gi|308185249|ref|YP_003929382.1| hypothetical protein HPSJM_07545 [Helicobacter pylori SJM180]
gi|308061169|gb|ADO03065.1| hypothetical protein HPSJM_07545 [Helicobacter pylori SJM180]
Length = 844
Score = 38.8 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 20/132 (15%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
++S+ + + K I LI +I++L++ H+K+ A
Sbjct: 45 IKSSKEFFKQLLRNKKKLYIALGILLSLIALIVALSLLLG-----HKKESQPASLQTNTA 99
Query: 61 LELFNS------NKLDDARSSFEKILSQDNKLYNPL---------SNMYIASILVAKGDT 105
+ +A E + D + L + M AS+L +G
Sbjct: 100 TANNETPNDTNNANKAEAEGQIENLDLPDLIGKDSLKRNDESQVDAMMQKASLLYEQGQK 159
Query: 106 KNAAEIFLKVAN 117
A +F K+A+
Sbjct: 160 DEALHLFDKIAS 171
>gi|332193129|gb|AEE31250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 978
Score = 38.8 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 62 ELFNSNKLDDARSSFEKILSQD----NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
L+ K D+A + E + S+ LY L+ L + G + K+
Sbjct: 671 TLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLAR-----CLCSAGRCNEGLNMLKKICR 725
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
PL V Y +QA VD+ + + + I ++ + +P N +L + L+ G
Sbjct: 726 VANKPLVVTYTGLIQAC---VDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLK-AYLQGGL 781
Query: 178 VQKAKTIFEELAKDNN 193
++A+ +F+++++D N
Sbjct: 782 FEEARELFQKMSEDGN 797
>gi|313200841|ref|YP_004039499.1| hypothetical protein MPQ_1099 [Methylovorus sp. MP688]
gi|312440157|gb|ADQ84263.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
Length = 566
Score = 38.8 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 21/144 (14%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F L + ++A S+ K + Y N+ ++L +G ++A + K
Sbjct: 118 FNLGFALQTLGRYEEAIPSYRKAAAMQPTFYEAHGNL--GTVLQKQGKMEDAIASYRKAL 175
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISK------ILQKLSEPSNPMHQFANEILGI 170
P AT L D E+ +Q + LG
Sbjct: 176 EIHADPRGYFNLAT-----ALRDHGQLEDAVTAYRSALRMQPDYVD--AWNN-----LGE 223
Query: 171 SALKFGKVQKAKTIFE-ELAKDNN 193
+ G + +A ++ L+ D
Sbjct: 224 ALRDQGNMDEAVKAYQHALSLDAA 247
>gi|218675243|ref|ZP_03524912.1| thioredoxin protein [Rhizobium etli GR56]
Length = 559
Score = 38.8 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ + +A EL + L++A + ++ D + L+ M I + +
Sbjct: 147 EAAEIEAVLTEAAELLAAGNLNEAAQLYGAVMQADPENAKALAGMAECMIAANQHERARE 206
Query: 109 --AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
++ ++A D ++ ++ A L D + E
Sbjct: 207 TLTDLPEELAKDAGIQAVLKKLDQIEEARKLGDPVALE 244
>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
7420]
gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
7420]
Length = 427
Score = 38.8 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ L L N++ +A++SF + +++ ++ + I + +GD + A F V
Sbjct: 225 YQLGLLLAQQNQITEAKNSFLRATQINSRFAP--AHYRLGLIFLQQGDAEEAIRRFNWVT 282
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
D + A Q + L+ YE+ L++ + +P A+ L ++ +
Sbjct: 283 QIDPDNVD----AYRQLGAALIQNGEYEQAIAALER-AISLDPYDSLAHYNLAVALHRNQ 337
Query: 177 KVQKAKTIFEE 187
+ + A + +++
Sbjct: 338 QYEDAISEYQQ 348
>gi|15966796|ref|NP_387149.1| hypothetical protein SMc02492 [Sinorhizobium meliloti 1021]
gi|307301624|ref|ZP_07581383.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307316352|ref|ZP_07595796.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15076068|emb|CAC47622.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306898192|gb|EFN28934.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306903322|gb|EFN33911.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 389
Score = 38.8 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 23 WIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
I + ++I +A S + F QAL + + D A S ++++
Sbjct: 3 RIGFMAGMLIAGVAT------NSVAATPAEIDARFKQALAEAGAGRPDSAIRSLRLLVTE 56
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
P + +A +L+ GD A +F +V + P VR
Sbjct: 57 TAA---PRIKLELARLLLRTGDNAGALALFRQVYLEKATPQKVR 97
>gi|296123820|ref|YP_003631598.1| hypothetical protein Plim_3586 [Planctomyces limnophilus DSM 3776]
gi|296016160|gb|ADG69399.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
DSM 3776]
Length = 1077
Score = 38.8 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 8/184 (4%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+ A+++ K+ + F QA + F DA S E++ + Y S +
Sbjct: 667 AEAMYYEGESWLLAKETEKALKVFQQAFDRFT---PKDAASVKEELKAPVLFGYR--SGL 721
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+A L G + A + + + + A I + +E+ KI +L
Sbjct: 722 MMARTLEQTGRLEQADQAYETLLKKFPKAEVFDQLLN-EWALINYEAGRFEQADKIFARL 780
Query: 154 SE--PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
P +P+ A L S L G+ +A+ EEL + S + R+ L +
Sbjct: 781 VAECPESPLADNAKLSLAESDLIQGEFARARKSLEELLESEQSDVSVKERALYQLVVLAI 840
Query: 212 SDQR 215
QR
Sbjct: 841 EQQR 844
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 131 LQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ A + +YE ++ ++L P P E+LG + + K +A+ F+ +
Sbjct: 918 VLWAEARLRHRNYEGLTDAAEELDGWQPPGPARWQIREVLGRAYKQQAKFDEARAAFQIV 977
Query: 189 AKDNNSPFG-ISTRSQMILA 207
KD S ++ ++Q +LA
Sbjct: 978 TKDPQSQQTELAAKAQFLLA 997
>gi|91202019|emb|CAJ75079.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 236
Score = 38.8 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 9/126 (7%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-APLA 124
KLD+A ++K LS D YN ++ IA++ KG A E + V P
Sbjct: 42 QGKLDEAMQYYKKALSIDP--YNRDAHCNIATVYHKKGQLNKALEEYKIVLELYPYDPQI 99
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ +QA + D + + + P A LGI+ + + A
Sbjct: 100 LYNVGAIQARNNNQDNA------IAFWEKAVELKPDFTEAQYALGIAYAQKNRFDDAIKS 153
Query: 185 FEELAK 190
++++ +
Sbjct: 154 YKKVLE 159
>gi|332970232|gb|EGK09225.1| hypothetical protein HMPREF9373_2205 [Psychrobacter sp. 1501(2011)]
Length = 275
Score = 38.4 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 13/192 (6%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
N++N + K +I ++L + W Y F S K+ + + +A +
Sbjct: 13 NNSNGDPQSMEKLKQAAGYIIGAILLALAGYFGWTY-FQNSGMKEDTVAADKYAAIEKTN 71
Query: 65 NS-----NKLDDARSSFEK-----ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ D + N +Y + M + V D K A E K
Sbjct: 72 DELMGQPEGNADVSKKLNADIDKLVAEHGNTVYAWQALMIKSRNAVDANDMKTATEALKK 131
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
DL + L+ A++L+ + +E K E+LG
Sbjct: 132 ALEIDLKDPGLHSITQLRYATVLLADGNVDEALTQASKDVPV--AFEASQQELLGDIYSA 189
Query: 175 FGKVQKAKTIFE 186
+KA ++
Sbjct: 190 KKDKEKALRAYQ 201
>gi|320532099|ref|ZP_08032980.1| tetratricopeptide repeat protein [Actinomyces sp. oral taxon 171
str. F0337]
gi|320135704|gb|EFW27771.1| tetratricopeptide repeat protein [Actinomyces sp. oral taxon 171
str. F0337]
Length = 758
Score = 38.4 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 27/137 (19%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDD----------------LAPLAVRYAATLQAA 134
S +A G A ++ ++ D A R + L+ A
Sbjct: 398 SRNSLAGSYRDAGRLDKAIALYEQILEDSIRVLGLDHPRTLTSRFDLAGAYRASGRLEEA 457
Query: 135 SILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD--- 191
L YE++ ++ P + A + L + + G++ +A T+ +++ D
Sbjct: 458 IAL-----YEQVFSGRSRVLVPDDRSTLTARDHLADTYWEAGRLDEAITLKKQILADAMR 512
Query: 192 ---NNSPFGISTRSQMI 205
+SP + RS +
Sbjct: 513 IMGADSPGASAARSNLA 529
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 64/175 (36%), Gaps = 23/175 (13%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNP------LSNMYIASILVAKGDTKNAA 109
F A S +L++A + +E++ S +++ P + ++A G A
Sbjct: 441 RFDLAGAYRASGRLEEAIALYEQVFSGRSRVLVPDDRSTLTARDHLADTYWEAGRLDEAI 500
Query: 110 EIFLKVANDD----LAPLAVRYAATLQAASILVDTSSYEEIS-------KILQKLSEPSN 158
+ ++ D A AA A+ D +E + +L+ P +
Sbjct: 501 TLKKQILADAMRIMGADSPGASAARSNLAATYRDAGRLDEAIPLYKENLEEFTRLAGPHH 560
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMILA 207
P + L + G++ +A ++++ D + P +++R + A
Sbjct: 561 PETLVSRHRLAGAYRDAGRLDEAIALYQQNLTDFTRLVGPDHPETLASRGTLAGA 615
>gi|320166411|gb|EFW43310.1| protein kinase inhibitor p58 [Capsaspora owczarzaki ATCC 30864]
Length = 504
Score = 38.4 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 13/171 (7%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+W+AP L ++L + + + + ++ +A + +A + ++
Sbjct: 8 RWLAPRLGALVLCVLLAVHAQHAAANSNDSLES-ILERAKAATIAGNYPEALEHYNTAVA 66
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
D Y L A++L A G T++A F V A Q A++L+
Sbjct: 67 ADPSSYVTL--FKRATVLSALGRTRHAVADFDTVLG----LKPDFNQARSQRAALLLKQG 120
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILG-----ISALKFGKVQKAKTIFEE 187
++++ +P Q A L ++ K G + F
Sbjct: 121 K-ADLARADFGELTKIDPNDQHARAQLAAVDTYLAQAKAGSEALKRHDFAA 170
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 11/133 (8%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F +A L + A + F+ +L + A++L+ +G A F ++
Sbjct: 76 FKRATVLSALGRTRHAVADFDTVLGLKPDF--NQARSQRAALLLKQGKADLARADFGELT 133
Query: 117 NDDLAPLAVR--------YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
D R Y A +A S + + L + PM++ +
Sbjct: 134 KIDPNDQHARAQLAAVDTYLAQAKAGSEALKRHDFAAALGHLTA-AIDIAPMNEELRRLR 192
Query: 169 GISALKFGKVQKA 181
+ + G +Q A
Sbjct: 193 ADAYIGAGDIQSA 205
>gi|311277544|ref|YP_003939775.1| cellulose synthase operon C domain-containing protein [Enterobacter
cloacae SCF1]
gi|308746739|gb|ADO46491.1| cellulose synthase operon C domain protein [Enterobacter cloacae
SCF1]
Length = 1164
Score = 38.4 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 14/157 (8%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
G+ QA L +S A + +L Q ++ +A +GDT+ A
Sbjct: 573 QAGQVLQQANLLHDSGHEAQAIA----LLKQQPPSTRY--DLTLADWAQQRGDTQTAISE 626
Query: 112 FLKV-ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP--SNPMHQFANEIL 168
+ V A D A A + + + + + L KL P P +
Sbjct: 627 YNAVLAKDAGNDDAHLGLAEVYS-----EDGNSTTAREQLAKLKAPTPDAPRSINMQRRI 681
Query: 169 GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
+ G +A+ IF +A + + ++
Sbjct: 682 ALVYAALGDTAQAEQIFSAIAPQAKAQPPSMESAMVL 718
Score = 38.0 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 27/78 (34%), Gaps = 8/78 (10%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
AR K+ + + IA + A GDT A +IF +A A
Sbjct: 649 SEDGNSTTAREQLAKLKAPTPDAPRSINMQRRIALVYAALGDTAQAEQIFSAIAPQAKAQ 708
Query: 123 LA-------VRYAATLQA 133
+R +A LQA
Sbjct: 709 PPSMESAMVLRDSARLQA 726
>gi|187735593|ref|YP_001877705.1| type II and III secretion system protein [Akkermansia muciniphila
ATCC BAA-835]
gi|187425645|gb|ACD04924.1| type II and III secretion system protein [Akkermansia muciniphila
ATCC BAA-835]
Length = 907
Score = 38.4 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 32/175 (18%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLS-----NMYIASI 98
E + + A+ L+ K +A + N YN L + +I
Sbjct: 62 ARREAQTQEAMQLLAEGRNLYREGKYKEALDKY-------NAAYNMLPSAPINDQRKEAI 114
Query: 99 LVAKGDTKNAAE-IFLKVANDDLAPLAVRYAATL--QAASILVDTSSYEEISKILQKLSE 155
GD A ++KV D A ++ A L ++A + T Y +
Sbjct: 115 ANHIGDASIAVAQEYIKVGRYDEADKLLQDAIKLNPRSAKLAKQTLEYMKDPIRTNPALT 174
Query: 156 PS--------NPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPFGISTR 201
P N + + G KA F + L+ D P+ ++ R
Sbjct: 175 PEHVKNVEKVNTLLH-----MAYGYYDLGDYDKAIAEFNKVLSID---PYNVAAR 221
>gi|124266417|ref|YP_001020421.1| hypothetical protein Mpe_A1224 [Methylibium petroleiphilum PM1]
gi|124259192|gb|ABM94186.1| hypothetical protein Mpe_A1224 [Methylibium petroleiphilum PM1]
Length = 634
Score = 38.4 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
L +A + +++ + + A++L+A+GD AA + +A A
Sbjct: 127 QRGFLAEAEQAIDRVENHLPPALEDDRGLLKANLLMARGDHAGAAAVLNGMAKRPGAGQY 186
Query: 125 VR---YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF---ANEILGISALKFGKV 178
R A +++ DT+ + + + +P AN LG +AL+ +
Sbjct: 187 ARFNLGVALVRSG----DTAGGSALLDEIGRAPQPDEEFRTLRDKANVALGFAALQDERA 242
Query: 179 QKAKTIFEEL 188
+ A+ E +
Sbjct: 243 EAARGYLERV 252
>gi|227823531|ref|YP_002827504.1| TPR repeat-containing protein [Sinorhizobium fredii NGR234]
gi|227342533|gb|ACP26751.1| TPR repeat-containing protein [Sinorhizobium fredii NGR234]
Length = 414
Score = 38.4 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F QA++L + KLD A + + +++ K + + +A + +GD A ++ +
Sbjct: 192 FEQAVDLHSRGKLDAAETGYRQVIHTAPK--HVYARYGLAQLCTDRGDHAEAEHLYRGLL 249
Query: 117 ND-DLAPLAVRYAATLQAASILVDTS--SYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ A Q A + +Y E+ L L + L
Sbjct: 250 SIMPGADKIQHRLGDAQMAQACYREACKTYGELLARHAHL--------GLVRYKLAVCLL 301
Query: 174 KFGKVQKAKTI---FEELAKDN 192
G+ A FEE+ D+
Sbjct: 302 AAGQRDAAIATFLSFEEINSDD 323
>gi|134095126|ref|YP_001100201.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans]
gi|133739029|emb|CAL62077.1| Competence lipoprotein ComL precursor [Herminiimonas
arsenicoxydans]
Length = 261
Score = 38.4 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 5/140 (3%)
Query: 29 ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN-KLY 87
I + L+ D E K + +++A E N+ + A S FEK+ S+ Y
Sbjct: 7 IALAFLLSACSLTPDQIDETKNWSPSKLYSEAREEMNTGNYEKAVSHFEKLESRYPFGTY 66
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
+ M IA +GD A + V Y L+ D S +
Sbjct: 67 AQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINFNDKVSVFDFL 126
Query: 148 KILQKLSEPSNPMHQFANEI 167
A E
Sbjct: 127 SRQDPTERDPKA----AREA 142
>gi|329851367|ref|ZP_08266124.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
C19]
gi|328840213|gb|EGF89785.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
C19]
Length = 638
Score = 38.4 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 7/141 (4%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ +G A L + +LD+A + E++L++ + + + A +L+ A
Sbjct: 136 ADNIGAARMLARILNDDGRLDEAEALLEEVLARAPDYHA--ARLDYALVLLQSQKPLPAR 193
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ + + R Q A+ V YE + + +L P P A EI
Sbjct: 194 QQAEHLLAHNPD---HRDYLK-QYAAACVALGDYEPVIALYDRLLSPGGPALPAA-EIAD 248
Query: 170 ISALKFGKVQKAKTIFEELAK 190
+ + ++ E LA
Sbjct: 249 LRYWRAHALKITGRYDEALAD 269
>gi|212692725|ref|ZP_03300853.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855]
gi|212664661|gb|EEB25233.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855]
Length = 967
Score = 38.4 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ A +K+L N Y+ + + A + D + A I+ ++ D A + R
Sbjct: 747 YESAARHLDKVLEYPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQL-KDKAASMERRQL 805
Query: 129 AT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
A L++A +L + EEI L + + +NE + L GK +A
Sbjct: 806 AKTGMLRSAHML---GNEEEIIFTATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDRAM 862
Query: 183 TIFEELAKDN 192
+ LAKD
Sbjct: 863 EDLKILAKDT 872
>gi|302338568|ref|YP_003803774.1| hypotheticalprotein [Spirochaeta smaragdinae DSM 11293]
gi|301635753|gb|ADK81180.1| TPR repeat-containing protein [Spirochaeta smaragdinae DSM 11293]
Length = 227
Score = 38.4 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 65 NSNKLDDARSSFEKILSQDNKLY-NPLSNMYIASILVAKGDTKNAAEIFLKVAND----- 118
++ DDA+ F ++ + K Y P++ M A+ L G+ K A EI+ KV +
Sbjct: 115 EKSQWDDAQKDFAELAKEYPKSYLAPVALMNQATALEEAGNNKEAVEIYQKVFDTYKETS 174
Query: 119 DLAPLAVRYAATL 131
AP A+ A L
Sbjct: 175 PDAPRALFSIARL 187
>gi|75909506|ref|YP_323802.1| hypothetical protein Ava_3299 [Anabaena variabilis ATCC 29413]
gi|75703231|gb|ABA22907.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 724
Score = 38.4 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
A E G++ALK G Q A E +A N + R +++A
Sbjct: 7 SALEA-GLAALKQGNYQTAIAQLEPIATQGNGTASLQARVGLVMA 50
>gi|17231870|ref|NP_488418.1| hypothetical protein all4378 [Nostoc sp. PCC 7120]
gi|17133514|dbj|BAB76077.1| all4378 [Nostoc sp. PCC 7120]
Length = 727
Score = 38.4 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
A E G++ALK G Q A E +A N + R +++A
Sbjct: 7 SALEA-GLAALKQGNYQTAIAQLEPIATQGNGTASLQARVGLVMA 50
>gi|322701171|gb|EFY92922.1| mitochondrial outer membrane 72Kda protein [Metarhizium acridum
CQMa 102]
Length = 622
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 16/136 (11%)
Query: 58 AQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-V 115
Q L+ + AR +FEK I D Y L+ ++ G+ A + F K +
Sbjct: 303 LQGLDKKTGEGYEQARQAFEKAIELGDLGEYEALAYNLRGTMRTLLGNHAEATKDFDKSI 362
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSY----EEISKILQKLSEPSNPMHQFANEILGIS 171
D + ++ ASI ++ E +K L++ + + + A +
Sbjct: 363 ELDPGMIQSY-----IKRASISLELGEPVKADAEFAKALEQDKDDPDVYYHRAQ-----A 412
Query: 172 ALKFGKVQKAKTIFEE 187
+ G + +A+ +++
Sbjct: 413 SFIKGDLAEAQKDYQK 428
>gi|166365876|ref|YP_001658149.1| lytic transglycosylase catalytic precursor [Microcystis aeruginosa
NIES-843]
gi|166088249|dbj|BAG02957.1| lytic transglycosylase catalytic precursor [Microcystis aeruginosa
NIES-843]
Length = 722
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 62/167 (37%), Gaps = 20/167 (11%)
Query: 34 SLAIWFYLFDGSHEKKKNIVG-------ENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
++ Y G +EK + + A L + KL +ARS+++K++ +
Sbjct: 236 AMIGAGYWQSGLYEKAYKAYAKATPSPEQAYRYARGLQIAKKLPEARSAYQKLIKTYPQA 295
Query: 87 YNP-LSNMYIASILVAKGDTKNAAEIFLKVAND--DLAPLAVRYAATLQ-AASILVDTSS 142
L + +A I + +A ++ D AP A+ A L + + + +
Sbjct: 296 SETGLGLLRLAQISPNR----DAIAYLDRIVKQFPDRAPEALEAKAKLLNSTNAQAASQT 351
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
++ + S+ + ++ A K G KA + +A
Sbjct: 352 WQTLLNKY-PKSDEAADYRW----LMAQRAAKSGDYAKAWQWAQPIA 393
>gi|195953657|ref|YP_002121947.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195933269|gb|ACG57969.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 375
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 64/167 (38%), Gaps = 9/167 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KV 115
+A+ L +K +A + K ++ D P + +A+I +KGDTK+ + +
Sbjct: 109 LDKAIILQAEHKTKEAIDTLNKCITNDYCSLRPQAYYQLANIYKSKGDTKDYIKNLNLAI 168
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEI-SKILQKLSEPSNPMHQFAN-EILGI--- 170
D +A A A + + S I K + + N + + ++L +
Sbjct: 169 LYDRDFNVAKFDLAR---AYVENNMCSKPNIEEKAIYLIDSEKNNIGASSIPDMLLLKTK 225
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
++ K ++A + ++ + + + +I + NK
Sbjct: 226 CYMEANKFKEASKLIRKILFKEDINQKYKDEAIELSKELITLEYVNK 272
>gi|75909679|ref|YP_323975.1| hypothetical protein Ava_3473 [Anabaena variabilis ATCC 29413]
gi|75703404|gb|ABA23080.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 155
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 19 CCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEK 78
+A + +L+ ++ I+F K + F + + L+ A ++F K
Sbjct: 6 QLTDILATVAVLVSITFLIYF-------AGKTLVTSNFFQKGVNLYQQKDYPGAEAAFRK 58
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA-PLAVRYAATL 131
+++ ++ + +++ +L +G A E+F +V N P AT+
Sbjct: 59 VIAINSTN--DVVRLFLGDVLREQGKVAEATELFQEVINRSPKNPQGYLRLATI 110
>gi|315453239|ref|YP_004073509.1| paralysed flagellum protein, PflA [Helicobacter felis ATCC 49179]
gi|315132291|emb|CBY82919.1| paralysed flagellum protein, PflA [Helicobacter felis ATCC 49179]
Length = 790
Score = 38.4 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 64 FNSNKLDDA-RSSFEKILSQDNKLYNPLSNMYIASIL-VAKGDTKNAAEIFLKVANDDLA 121
+N+ + A ++ E + + +N ++ PL IL + G + F ++ D
Sbjct: 415 AKNNQPNKAHIANLEYLDNFNNAMHIPLVKQRDNEILFLMHGSFEEKLARFNQILKDFPQ 474
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ A A +L++ Y ++ + L+ S PM Q A LG +A+K G + A
Sbjct: 475 GSSEHQKALEYKAQMLLEERYYSQVLGMAPDLAMNSEPMQQ-ALVALGRNAVKEGDCRSA 533
Query: 182 KTIFEELA 189
++A
Sbjct: 534 VDYLVQVA 541
>gi|56605882|ref|NP_001008437.1| dnaJ homolog subfamily C member 3 precursor [Gallus gallus]
gi|73620805|sp|Q5ZI13|DNJC3_CHICK RecName: Full=DnaJ homolog subfamily C member 3; Flags: Precursor
gi|53136602|emb|CAG32630.1| hypothetical protein RCJMB04_31h14 [Gallus gallus]
Length = 503
Score = 38.4 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 25/163 (15%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ G+ V + +L + +L DA S F + D+ Y ++ A++ +A
Sbjct: 26 YQGAECGINAEVEKQLEMGKKLLAAGQLADALSHFHAAIEGDSDNY--IAYYRRATVYLA 83
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYA-ATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
G +K A KV + + LQ +L+ ++E + + + SNP
Sbjct: 84 MGKSKAAIRDLSKVV------ELKQDFTSRLQRGHLLLKQGKFDEAEDDFKNVLK-SNPS 136
Query: 161 HQFANEIL---------------GISALKFGKVQKAKTIFEEL 188
+ E +SA + + A + +E+
Sbjct: 137 NNEEKEAQTQLTKSDELQRLYSQALSAYRQEDYEAAIPLLDEI 179
>gi|297811171|ref|XP_002873469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319306|gb|EFH49728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 38.4 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 103 GDTKNAAEIFLKVANDDLAPLAVR-----YAATLQAASILVDTSSYEEISKILQKLSEPS 157
G T A +F ++ A +R Y + ++A ++ D + L S S
Sbjct: 314 GSTSGALCVFGEILKRSGANEVLRPKPHLYLSMMRAFAVQGDYGMVRNLYLRLWPDSSGS 373
Query: 158 --NPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ Q A+ +L +AL G++ +A I + +
Sbjct: 374 ISKAVQQEADNLLMEAALNAGQLDEALGILSSIVR 408
>gi|225428117|ref|XP_002278375.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 681
Score = 38.4 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 16/127 (12%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
S ++D+A F+ + ++ +N + + + GD + A E F++ +
Sbjct: 174 RSGRMDEALQLFDSMQERNVVSWNAMV-----TGFLQNGDVERAIEFFMR--------MP 220
Query: 125 VRYAATLQA-ASILVDTSSYEEISKIL--QKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R +A+L A + L+ +E +IL + + A IL + G+V KA
Sbjct: 221 ERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKA 280
Query: 182 KTIFEEL 188
+ +F+++
Sbjct: 281 RQLFDQI 287
>gi|121998998|ref|YP_001003785.1| hypothetical protein Hhal_2219 [Halorhodospira halophila SL1]
gi|121590403|gb|ABM62983.1| Tetratricopeptide domain protein [Halorhodospira halophila SL1]
Length = 252
Score = 38.4 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIF 112
GE + A ++AR F +L D Y + +IA A+ + ++A F
Sbjct: 124 GELYQAAFRQLGDGLYEEAREGFRDVLDTDADGDYAANAVYWIAETYYAEREFEDAEAYF 183
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
+V +D V A L+ I + EE L+ + E
Sbjct: 184 NRVVDDYEESNKVAD-AQLKLGYIAFEEDRLEEARDRLEAVQED 226
>gi|121593584|ref|YP_985480.1| hypothetical protein Ajs_1172 [Acidovorax sp. JS42]
gi|120605664|gb|ABM41404.1| conserved hypothetical protein [Acidovorax sp. JS42]
Length = 225
Score = 38.4 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 59/156 (37%), Gaps = 9/156 (5%)
Query: 3 SNNDANSYKGKCKMGKCCY----KWIAPLLILMILSLAIW--FYLFDGSHEKKKNIVGEN 56
+NN + + + K + I LI+++ LA W + L+ G ++ + E
Sbjct: 2 ANNFDLQEQEQLEQIKHFWNTWGTPITWALIVIMGGLAAWNGYRLWQGRQAQQATALAEA 61
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A++ + +++ A + + + A K D + +
Sbjct: 62 VEMAVQAGDLARVEQAVGDLKSSYGGTAQAWQAGLLAAKALADAGKWDAAKSTLAW---V 118
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
+ + + A L+ AS+L++ +Y+E S L
Sbjct: 119 AEKASDEGYQALARLRLASVLIEQKAYDEASAQLSG 154
>gi|260889440|ref|ZP_05900703.1| putative tetratricopeptide repeat-containing domain protein
[Leptotrichia hofstadii F0254]
gi|260860851|gb|EEX75351.1| putative tetratricopeptide repeat-containing domain protein
[Leptotrichia hofstadii F0254]
Length = 405
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 57/146 (39%), Gaps = 15/146 (10%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
K E + + ++L + + +A++ FEK + K +++ +A + + A
Sbjct: 177 KMRPGAEAYNRGVDLIKAKRYSEAKAEFEKAYNAGIKE----ADIRVALLNKQLKNNSEA 232
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTS-SYEEISKILQKLSEPSNPMHQFANEI 167
F K AN + A + +IL D E +L+ + + M
Sbjct: 233 VRWFQKAANRGV------KEANFEIGAILYDGGKQSESRPYLLKAYNAGNKAMAMP---- 282
Query: 168 LGISALKFGKVQKAKTIFEELAKDNN 193
+ +S K + +A ++ AK+ +
Sbjct: 283 IALSYHKQNNMTEALKWYKIAAKNGD 308
>gi|307254473|ref|ZP_07536310.1| hypothetical protein appser9_7200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306862614|gb|EFM94571.1| hypothetical protein appser9_7200 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
Length = 453
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 25/59 (42%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K D+A ++F + +D+ ++ + + L +G A + V +D A
Sbjct: 1 LGEQGKFDEAIAAFNNVSREDSTELYAIAQVNLGITLRKQGRGDEAIVAYRNVNREDSA 59
>gi|293569947|ref|ZP_06681034.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E1071]
gi|291587695|gb|EFF19572.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E1071]
Length = 678
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNSNKLDD 71
+IA +IL+ + +FY + E + GE F QAL + NK +
Sbjct: 14 AYIAGAVILIATAGGGYFY-YQHYQETQAVEAGEKTVEQFVQALNKGDYNKAAE 66
>gi|260773383|ref|ZP_05882299.1| membrane protein [Vibrio metschnikovii CIP 69.14]
gi|260612522|gb|EEX37725.1| membrane protein [Vibrio metschnikovii CIP 69.14]
Length = 204
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 5/162 (3%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIAS 97
+ + S + E +++A+ F++ K A S + + K Y L+ M +A
Sbjct: 39 WRYYQHSTTTGQETTSETYSKAIANFSA-KGAQAESDLQHFIDNHQKSEYAVLAAMQLAK 97
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
G A + A A+ + A + + ++ L ++E S
Sbjct: 98 AQADAGQLDEALAQL-EWAKKSTKDAALTPVIAFRIARLQAEQQQFDAALAELTTITEAS 156
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
E+ G AL+ G A + + + +N+ +
Sbjct: 157 WAARVA--ELRGDIALRKGDKDAAYAAYSQAQQSSNASQTLQ 196
>gi|187735734|ref|YP_001877846.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
ATCC BAA-835]
gi|187425786|gb|ACD05065.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
ATCC BAA-835]
Length = 795
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 33/97 (34%), Gaps = 1/97 (1%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+ + A+ L + D+A F +++ + S +A+ + G+
Sbjct: 71 QSAQAPLAEYRAAMCLEELGRKDEAHGLFLRLIQTGSPALVAASAYRLATDASSAGEIDK 130
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
A + + V + A + + + + + E
Sbjct: 131 AIQYYQLVIRNAEQNDLKVD-AQYRLGRLFLSSGNPE 166
>gi|159898600|ref|YP_001544847.1| peptidase C14, caspase catalytic subunit P20 [Herpetosiphon
aurantiacus ATCC 23779]
gi|159891639|gb|ABX04719.1| peptidase C14, caspase catalytic subunit P20 [Herpetosiphon
aurantiacus ATCC 23779]
Length = 737
Score = 38.4 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 10/136 (7%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A + S +D A S I + +++ Y + IA + GD A I + ND+
Sbjct: 511 AEAIATSGNIDRALSIAATIENDNSRSY---ALKKIAETIATSGDIDRALSIAATIENDN 567
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A+ A A S +D + I + ++ +A + + + G +
Sbjct: 568 SRSYALTAIAEAIATSGNIDRA-----LSIAATIENDNS--RSYALKKIAEAIATSGDID 620
Query: 180 KAKTIFEELAKDNNSP 195
+A +I + ++ +
Sbjct: 621 RALSIAATIENNDRTG 636
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A S +D A S I + D IA GD A I + ND+
Sbjct: 446 AETTATSGNIDRALSITAAIENNDRTGI----LKKIARTAATSGDIDRALSIAATIENDN 501
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A+ A A S +D + I+ ++ + S + + A E + S G +
Sbjct: 502 SRSYALTAIAEAIATSGNIDRAL--SIAATIENDNSRSYALKKIA-ETIATS----GDID 554
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMI 205
+A +I + DN+ + ++ ++ I
Sbjct: 555 RALSIAATIENDNSRSYALTAIAEAI 580
>gi|297183434|gb|ADI19566.1| FOG: tpr repeat-protein [uncultured Acidobacteria bacterium
HF0770_27F21]
Length = 333
Score = 38.4 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 55/140 (39%), Gaps = 11/140 (7%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA-PL 123
++ ++ AR ++EK+L+ + ++N + + V GD + A F V + P
Sbjct: 184 DAGDVEKAREAYEKLLAAEPDN--VMANYNMGEMFVEAGDMEEALPYFESVLQQNPDDPA 241
Query: 124 AVRYAATL---QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A L Q ++ + + + ++P + A+ +G + ++ G +
Sbjct: 242 VYYNVAELYFSQQVLGCLEPVPECQGAISYYNRALETDPNYLPAHMQIGFALVRLGDIDN 301
Query: 181 AKTIFEELA-----KDNNSP 195
A FE+ D P
Sbjct: 302 AVLAFEKYVELAPEDDAQLP 321
>gi|189459720|ref|ZP_03008505.1| hypothetical protein BACCOP_00348 [Bacteroides coprocola DSM 17136]
gi|189433567|gb|EDV02552.1| hypothetical protein BACCOP_00348 [Bacteroides coprocola DSM 17136]
Length = 558
Score = 38.4 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 43/136 (31%), Gaps = 17/136 (12%)
Query: 53 VGENFAQALELFNSNKLDDAR-SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
A L N +A ++ D + YN L M A+ GD A
Sbjct: 355 SANELLYAATLTNDKARQEAIYKKTTELYPNDFRAYNNLGMMAYAN-----GDFTTAENY 409
Query: 112 FLKVA-NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
F + A D AP I + + L K + + ANE LG
Sbjct: 410 FKQAASKDANAPEVNTNL-----GYIELVKGNVANAETYLSKSTGAN-----TANEALGN 459
Query: 171 SALKFGKVQKAKTIFE 186
+K G+ +A F
Sbjct: 460 LYIKQGQYDRAVQAFG 475
>gi|298571403|gb|ADI87744.1| TPR-repeat-containing protein [uncultured Nitrospirae bacterium
MY3-11A]
Length = 696
Score = 38.4 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 64 FNSNKLDDARSSFEKILSQDNK---LYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDD 119
NS D+A ++I+S Y L+ K +A + F +
Sbjct: 550 INSASYDEAAQFADRIISSSPDLPTGY-----YLKGDALIGKKSYSDALKYFTTALGYAP 604
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
APL R + ++ D +Y+ +SK + S ++ +LG+ AL G +
Sbjct: 605 DAPLIYRKLSECRSKMRQ-DKEAYQALSKAVDIFSPQTS---YSDLYMLGLLALTNGDRE 660
Query: 180 KAKTIF 185
+A +F
Sbjct: 661 RAHMLF 666
>gi|89072700|ref|ZP_01159265.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium sp. SKA34]
gi|89051520|gb|EAR56974.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium sp. SKA34]
Length = 252
Score = 38.4 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 6/185 (3%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+ LL L+ A + +G K L + + AR + E L
Sbjct: 4 WSVYPLLLCLLFTGCATVDVVDNGKEFDAKAASEARLNLGLNYLKDGQWERARENLEIAL 63
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
D Y + + +A G+ A +++ K + +
Sbjct: 64 KYDPDYYR--AQISMAYYYQKVGEKDAAEKMYRKALKHSPKNG---DVLNNYGVFLCSEG 118
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE-ELAKDNNSPFGIS 199
E I+ ++ + +P + + E G+ + K G ++ A FE L+ D P +
Sbjct: 119 RYDEAIAAFVKAIEQPYYYLISASYENAGLCSRKQGNLETATGYFENALSHDPYRPRSML 178
Query: 200 TRSQM 204
+Q+
Sbjct: 179 QLAQV 183
>gi|167044578|gb|ABZ09251.1| putative TPR domain protein [uncultured marine crenarchaeote
HF4000_APKG7F11]
Length = 383
Score = 38.4 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 8/135 (5%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+A L+ ++ D+A +++L +D LY + Y +L G+ + A F KV
Sbjct: 23 KAATLYELSRFDEAMKYCDQVLEEDP-LY-LHALFYKGLVLGKMGEHQKAISFFDKVLQT 80
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D A A YE+ K +K + + P + A G + K GK
Sbjct: 81 DRK----HVLALYNEAVQFGKIGKYEDAVKFFEK-TLEAEPENSSAMYETGRALAKLGKT 135
Query: 179 QKAKTIFE-ELAKDN 192
+++ F+ + D
Sbjct: 136 KESLLWFDRAIKADA 150
>gi|149919291|ref|ZP_01907773.1| hypothetical protein PPSIR1_03723 [Plesiocystis pacifica SIR-1]
gi|149819791|gb|EDM79215.1| hypothetical protein PPSIR1_03723 [Plesiocystis pacifica SIR-1]
Length = 367
Score = 38.4 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 9/149 (6%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DL 120
L ++ +LD+A E D YN + I I G+ + A + V
Sbjct: 75 ALMDAGELDEALVEAEAWREID--AYNLIVVRLIGDIHSELGNQREALRTYSAVTELLPE 132
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
P A R A++ +D + Y + Q + A E L AL+ G++ +
Sbjct: 133 DPEAQRALASVLEVQGDLDNA-YARMRVATQLRPKDLR----LAFE-LADLALRRGQLDE 186
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANI 209
A+ E + P + ++ LA +
Sbjct: 187 ARAGLEAIVAHPEVPEALEVPAKQRLAQV 215
>gi|299744901|ref|XP_001831342.2| hypothetical protein CC1G_00889 [Coprinopsis cinerea okayama7#130]
gi|298406340|gb|EAU90505.2| hypothetical protein CC1G_00889 [Coprinopsis cinerea okayama7#130]
Length = 719
Score = 38.4 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A +L + + E + +Q + PL +A I + G+ + AA+ F VA
Sbjct: 535 LIMASQLVEMKEYAASARLLEPLCNQKDVSNPPL-RSAVARIYLQSGNLEMAAKHFEIVA 593
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
D A + + AA + +E +++L+++ + N A L ++ L G
Sbjct: 594 QDPSADERQK---KMDAALLASARGEWESATEMLREIIDKDNE-DYAAVNNLSVALLSQG 649
Query: 177 KVQKAKTIFE 186
+++A I E
Sbjct: 650 NLKEAIEILE 659
>gi|303279024|ref|XP_003058805.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459965|gb|EEH57260.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 669
Score = 38.4 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 15/135 (11%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV- 115
+ L +DA ++F K+ + L + S ++ GD A + +
Sbjct: 447 YNLGLAYIKLGAYEDALAAFRKVHAMTPDNAEVLYQLGNVSDML--GDFPAAIKHLEILH 504
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSS---YEEISKILQKLSEPSNPMHQFANEILGISA 172
A P + + AA + D + Y + S L LG
Sbjct: 505 AKVSTDPGILARLGAIHAA--IGDEAKALHYYQESHRLYPSDMDVLRW-------LGTFY 555
Query: 173 LKFGKVQKAKTIFEE 187
+K G +KA+ +++
Sbjct: 556 VKTGNWEKARELYQL 570
>gi|297537708|ref|YP_003673477.1| hypothetical protein M301_0516 [Methylotenera sp. 301]
gi|297257055|gb|ADI28900.1| TPR repeat-containing protein [Methylotenera sp. 301]
Length = 348
Score = 38.4 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 38/120 (31%), Gaps = 9/120 (7%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ +L + + A + + K + +L +G A
Sbjct: 27 AAHADELKDISQLADQGQSAVAIDRLNTYIVANPKN--AQAMFMKGVLLAEQGRRDEAIR 84
Query: 111 IFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
F V P A L A D +++ K L+ + ++P + A+E LG
Sbjct: 85 TFTDVTEKFPNLPEPYNNLAVLYA-----DQGQFDKARKALET-AIKTHPSYATAHENLG 138
>gi|237724975|ref|ZP_04555456.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229436713|gb|EEO46790.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 967
Score = 38.4 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ A +K+L N Y+ + + A + D + A I+ ++ D A + R
Sbjct: 747 YESAARHLDKVLEYPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQL-KDKAASMERRQL 805
Query: 129 AT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
A L++A +L + EEI L + + +NE + L GK A
Sbjct: 806 AKTGMLRSAHML---GNEEEIIFTATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDGAM 862
Query: 183 TIFEELAKDN 192
+ LAKD
Sbjct: 863 EDLKILAKDT 872
>gi|110640054|ref|YP_680264.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282735|gb|ABG60921.1| conserved hypothetical protein, with TPR repeat [Cytophaga
hutchinsonii ATCC 33406]
Length = 279
Score = 38.4 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 11/144 (7%)
Query: 46 HEKKKNIVGENFAQALELFNSNKL----DDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+EK + + QA +L + N+ D +R +EK L + + S + A V
Sbjct: 119 NEKNLLSAADAYMQASDLVSVNEKSAYMDKSRLYYEKALDINASNLDTKSKL--AMTYVT 176
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+ I +V +D A + + + Y + + L NP H
Sbjct: 177 TSNPMTGIRILQEVVKEDPRN----ETAIFNLGYLSMQSRQYNKAVDRFKSLI-EINPAH 231
Query: 162 QFANEILGISALKFGKVQKAKTIF 185
LG+S L+ G KA F
Sbjct: 232 ASGTFYLGLSYLELGNKGKANQYF 255
>gi|269793570|ref|YP_003313025.1| CheY-like receiver domain/HTH DNA-binding domain-containing
response regulator [Sanguibacter keddieii DSM 10542]
gi|269095755|gb|ACZ20191.1| response regulator containing a CheY-like receiver domain and an
HTH DNA-binding domain [Sanguibacter keddieii DSM 10542]
Length = 862
Score = 38.4 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 6/145 (4%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ A L K +A ++ + + +AS L
Sbjct: 391 WLARLPAAHRSSRSELLLARALILEGKTPEALDRLRHLVDAHPGAPPAKALILLASALRI 450
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
GD A + A+D + +R + A L+D E + L++L N
Sbjct: 451 SGDPVEARAVLAS-ADDSVDAELLREHVDVVA---LLDGRVPERLLSRLEQLPGEEN--R 504
Query: 162 QFANEILGISALKFGKVQKAKTIFE 186
A + L G+V +A+ F
Sbjct: 505 VVAAVYRTMDLLSEGRVPQARATFA 529
>gi|237709421|ref|ZP_04539902.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229456477|gb|EEO62198.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 967
Score = 38.4 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ A +K+L N Y+ + + A + D + A I+ ++ D A + R
Sbjct: 747 YESAARHLDKVLEYPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQL-KDKAASMERRQL 805
Query: 129 AT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
A L++A +L + EEI L + + +NE + L GK A
Sbjct: 806 AKTGMLRSAHML---GNEEEIIFTATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDGAM 862
Query: 183 TIFEELAKDN 192
+ LAKD
Sbjct: 863 EDLKILAKDT 872
>gi|160900449|ref|YP_001566031.1| hypothetical protein Daci_5017 [Delftia acidovorans SPH-1]
gi|160366033|gb|ABX37646.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
Length = 227
Score = 38.4 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 42/126 (33%), Gaps = 36/126 (28%)
Query: 24 IAPLLILMILSLAIW--FYLFDGSHE----------------KKKNIVGENF-------- 57
I +L+++ + A W + ++ K G+ F
Sbjct: 27 ITGVLVVIFVGFAGWNGYQYWEKRQATQAAALAHAVDVALAGKDAARAGQAFADLKDKYA 86
Query: 58 ----------AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
A + KLDDA+++ + + ++ Y L+ + ++++L +
Sbjct: 87 GTTQAAQAGLLLAKAAVDEGKLDDAKAALSWVADKGDEGYKALAKLRLSAVLEQQKQYDE 146
Query: 108 AAEIFL 113
A +
Sbjct: 147 ALKALE 152
>gi|124516587|gb|EAY58095.1| putative TPR-domain containing protein [Leptospirillum rubarum]
Length = 327
Score = 38.4 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 12/138 (8%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
++A F ++ D + + + + +G A + + +
Sbjct: 168 EQGHFEEAERYFLELAEMDP-AHPRVHQLL-GLLYSEQGKWDEAIMEWEEAMEIAPSDEV 225
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA-KT 183
+R L E +L++ + NP++ A LG + K + A +
Sbjct: 226 LREL-----GWTLNMAGEKEAAISMLEE-ALDLNPLNLQARIDLGSVLMDQEKFESAIRE 279
Query: 184 IFEELAKDNNSPFGISTR 201
E+AK+ + P + R
Sbjct: 280 W--EIAKNQD-PENKTIR 294
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 54/149 (36%), Gaps = 10/149 (6%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + D+A + L + + + + + A + + + L
Sbjct: 60 ALILGGRYDNALDRVREFLGAMPENHRLNLYLLHLLVYHKS--FEEALALGKSLLKESLT 117
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ R L A L T + ++L +L +P++ A E LG + G ++A
Sbjct: 118 SMEKRDV-LLHTAFSLHGTGELRKAVRMLNELL-DEDPLNTDALETLGKIYFEQGHFEEA 175
Query: 182 KTIFEELAK-DNNSPFGISTRSQMILANI 209
+ F ELA+ D P R +L +
Sbjct: 176 ERYFLELAEMDPAHP-----RVHQLLGLL 199
>gi|265754620|ref|ZP_06089672.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263234734|gb|EEZ20302.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 967
Score = 38.4 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ A +K+L N Y+ + + A + D + A I+ ++ D A + R
Sbjct: 747 YESAARHLDKVLEYPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQL-KDKAASMERRQL 805
Query: 129 AT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
A L++A +L + EEI L + + +NE + L GK A
Sbjct: 806 AKTGMLRSAHML---GNEEEIIFTATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDGAM 862
Query: 183 TIFEELAKDN 192
+ LAKD
Sbjct: 863 EDLKILAKDT 872
>gi|134094493|ref|YP_001099568.1| hypothetical protein HEAR1266 [Herminiimonas arsenicoxydans]
gi|133738396|emb|CAL61441.1| conserved hypothetical protein; putative TPR domain [Herminiimonas
arsenicoxydans]
Length = 216
Score = 38.4 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 4/193 (2%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y + L++++L + + K+ N + + + + + D + +
Sbjct: 21 YGNLITWLLIIVLGAYAAWAAWGAYQNKQANQAAQLYEELQKAVTAQDKDQVQRVAADME 80
Query: 81 SQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ Y ++ + A D K A V D + A+++ A IL+D
Sbjct: 81 GKFPGTAYAQMTALAAAKSAFDANDFKTAKAQLQWVI-DKGVSDDYKAIASIRLAGILLD 139
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+Y+E K+L + + G + K+ +A+T ++ + ++
Sbjct: 140 EKAYDEGLKLLS--ASFPAQFAGVVEDRKGDILMAQNKLDEARTAYQAALEKTDAKNPGR 197
Query: 200 TRSQMILANIIAS 212
Q+ L I
Sbjct: 198 QLIQIKLDAIGGG 210
>gi|302338867|ref|YP_003804073.1| restriction endonuclease [Spirochaeta smaragdinae DSM 11293]
gi|301636052|gb|ADK81479.1| restriction endonuclease [Spirochaeta smaragdinae DSM 11293]
Length = 453
Score = 38.4 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 6/154 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
++ LF K+ +A+ E+ L + Y ++ Y+ +L D A F K
Sbjct: 173 YSLGYALFRGKKVVEAKIELEEALKHNPNNYK--AHFYLGKLLKENHDYVAALLNFEKAQ 230
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYE--EISKILQKLSEPSNPMHQFANEILGISALK 174
D +R + + +++ E+ + ++ S+ +A L + K
Sbjct: 231 RDPEI--KIRALVERGSCYMHMNSFDKAVTELERAIKLSVNDSSQEVLYARYFLALCYEK 288
Query: 175 FGKVQKAKTIFEELAKDNNSPFGISTRSQMILAN 208
+KA +E + K S ++ +
Sbjct: 289 SRDFEKAIEQWEAIYKKKPSFRDVAEKLSQYQEL 322
>gi|160897947|ref|YP_001563529.1| TPR repeat-containing protein [Delftia acidovorans SPH-1]
gi|160363531|gb|ABX35144.1| TPR repeat-containing protein [Delftia acidovorans SPH-1]
Length = 219
Score = 38.4 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 9/116 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+++ + +L + K A + + L+++ + +P A L G T A +
Sbjct: 70 DDYTEVNQLLRNGKSTQALARADAYLAKNAR--DPQMRFLKAVALTDSGKTDEAIAALNQ 127
Query: 115 VAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ D P A + A +D + L+ + +NP + A E LG
Sbjct: 128 LIEDYPELPEPYNNLAVIYAGQNQLDKA-----RSALES-AVRNNPNYGVAYENLG 177
>gi|84500680|ref|ZP_00998929.1| thioredoxin [Oceanicola batsensis HTCC2597]
gi|84391633|gb|EAQ03965.1| thioredoxin [Oceanicola batsensis HTCC2597]
Length = 310
Score = 38.4 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 6/137 (4%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
N + + A A E+ DA ++ IL +D + + +++ + + D A
Sbjct: 134 TSNGLDDAVAAAEEMLEQGAAADAAETYAAILQEDPAHAAAYAGLVRSNLALGQIDQAEA 193
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+ A AP A ++ A D E+ ++ ++P A L
Sbjct: 194 I-LNGAPAEISTAPELEAAHAQIELARQAADAGPVAELEARVE-----ADPDDHEARFDL 247
Query: 169 GISALKFGKVQKAKTIF 185
+ G V+ A
Sbjct: 248 ARALHAKGDVEGAIDQL 264
>gi|88703670|ref|ZP_01101386.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88702384|gb|EAQ99487.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 220
Score = 38.4 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 50/153 (32%), Gaps = 2/153 (1%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
+ +++ L L + + + E + Q L+ ++ + L ++
Sbjct: 27 VGVVLALGLGFGWQAWQKNQETAAQNASNLYQQMLQALSAEETGTIGRQIATELKDSHRG 86
Query: 87 --YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y + +++A + V G + A + V A L+ A +L E
Sbjct: 87 TVYAQFAALHLARLAVNDGQPQVAEQELRWTLAMADEGDDVHQVAQLRLARVLAAQEKEE 146
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGK 177
E +L + + A + ++ +
Sbjct: 147 EALALLAGANTDFIASYAIARGDILLAQGREAD 179
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 38.0 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)
Query: 52 IVGEN-FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
G+ + Q L K ++A +F+ +L Q+ + + ++L+ G + A +
Sbjct: 377 AYGDALYQQGRLLAREGKYEEALKAFDSMLEQNPEFIK--AQKLRGTMLIKLGRIEEALD 434
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEIL 168
+ + + LQ IL+D +E K L+K++E P N
Sbjct: 435 SLAQSLEKEPENYGL----WLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNK--- 487
Query: 169 GISALKFGKVQKAKTIFEE 187
G + + ++A FEE
Sbjct: 488 GYALYSMDRYEEALEDFEE 506
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
++ A+ K ++A +FEK+ +++ + + G A + F +V
Sbjct: 621 YSLAVAQAKLGKQEEALETFEKLAAKNPEDLKI--QRRKGKFAMEIGKYDTALQAFDQVL 678
Query: 117 NDDL 120
++
Sbjct: 679 SEKP 682
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 13/135 (9%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ + + + +A FEK+L D + + ++ + G+ + A +F
Sbjct: 1056 YLKGISHSKLKQHKEAAKDFEKVLELDPAYQDTCYQLGLSYFEL--GNFEEAIRVFESAL 1113
Query: 117 N---DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
++L L +R A L++ S + E+ K NP A L ++
Sbjct: 1114 KMDPENLDALYMRSLALLRSKRYGESASGFREVLKR--------NPSDTEALAHLSTASF 1165
Query: 174 KFGKVQKAKTIFEEL 188
K G ++A +F+++
Sbjct: 1166 KQGFYEEALGLFDQV 1180
>gi|195953342|ref|YP_002121632.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932954|gb|ACG57654.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 890
Score = 38.0 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 13/154 (8%)
Query: 36 AIWFY---LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN 92
AI++Y + + + K+ + + S L+ A F + + +
Sbjct: 581 AIYYYQKVVENYPNSKEAMEASYDIISSRIKNPSKNLEVAIKQFIERYKNNPLSEDL--K 638
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
+A+I + +G + A + + RY A L+ A + +D EE+ +
Sbjct: 639 YQLANIYIKQGKKEKAYSLLSSIVGGP------RYRAMLKMAMLELDPHKKEELL--INV 690
Query: 153 LSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
+ + A E+L LK G + KA I+
Sbjct: 691 IDNAQGETKEKAKELLADLYLKEGHINKAAAIYS 724
>gi|116751495|ref|YP_848182.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116700559|gb|ABK19747.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
fumaroxidans MPOB]
Length = 509
Score = 38.0 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 50/155 (32%), Gaps = 19/155 (12%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+LD+A F +++Q+ + Y + +A I +GD A E + A
Sbjct: 81 GRLDEAEVIFRALIAQNEEAYRK-AWFDVAHIRSRRGDDAGAVEA---LGKARPADPGRA 136
Query: 127 Y----AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
++ S+ + P A E + + LK ++A+
Sbjct: 137 DYEIGLCRMKLNEYREAIGSF-----RKAGAARPDLAPRAIAQEGICFAHLKE--YKEAR 189
Query: 183 TIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
E K + P + + + A + +
Sbjct: 190 KSLEAALKMDQPPET----AAELRKLLAAVENAAR 220
>gi|315637376|ref|ZP_07892591.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478350|gb|EFU69068.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 503
Score = 38.0 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQD---NKLYNPLSNMYIASILVAKGDTKNAA 109
+ F ALE +N L +A +++++ D +K YN L+ + L KG+ A
Sbjct: 168 AKDWFLLALENHKNNNLLEAEKLYKEVIKIDDKYSKAYNNLAFL-----LSEKGEIDEAE 222
Query: 110 EIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+++ + DD A A L + +D + + + ++ + SN + L
Sbjct: 223 KLYREAIKIDDKNSKAYNNLAFLLSEREEIDEAE-KLYREAIKIDDKNSNTYNN-----L 276
Query: 169 GISALKFGKVQKAKTIFEE 187
+ G++ +A+ +++E
Sbjct: 277 ALLLANKGEIDEAEKLYKE 295
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 66/166 (39%), Gaps = 23/166 (13%)
Query: 60 ALELFNSNKLDDARSSFE---KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKV 115
AL L N ++D+A + KI +++ YN L+ + L KG+ A +++ +
Sbjct: 345 ALLLKNKGEIDEAEKLYREAIKIDDKNSNTYNNLALL-----LANKGEIDEAEKLYKEAI 399
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISK----ILQKLSEPSNPMHQFANEILGIS 171
DD A A +L + E K ++ + S+ + L +
Sbjct: 400 KIDDKNSKAYNNLA-----FLLSEKGEIGEAEKLYREAIKIDDKDSDIYYN-----LALL 449
Query: 172 ALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
G + +A+ ++ E K ++ + ++LAN D+ K
Sbjct: 450 LKNKGDIDEAEKLYREAIKIDDKDLDVYNNLAVLLANKGDIDEAEK 495
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 23/136 (16%)
Query: 60 ALELFNSNKLDDARSSFEKILSQD---NKLYNPLSNMYIASILVAKGDTKNAAEIF-LKV 115
AL L N ++D+A +++ + D +K YN L A +L KG+ A ++F +
Sbjct: 277 ALLLANKGEIDEAEKLYKEAIKIDDKYSKAYNNL-----AVLLSEKGEMDEAEKLFREAI 331
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISK----ILQKLSEPSNPMHQFANEILGIS 171
DD A +L + +E K ++ + SN + L +
Sbjct: 332 KIDDKNSNTYNNLA-----LLLKNKGEIDEAEKLYREAIKIDDKNSNTYNN-----LALL 381
Query: 172 ALKFGKVQKAKTIFEE 187
G++ +A+ +++E
Sbjct: 382 LANKGEIDEAEKLYKE 397
>gi|302912770|ref|XP_003050773.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731711|gb|EEU45060.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 613
Score = 38.0 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 16/136 (11%)
Query: 58 AQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-V 115
+ALE + ++AR +FEK + D Y L+ + G+ +A F K +
Sbjct: 294 LEALEKKTGDGYEEARQAFEKALELGDLGEYEALAYNMRGTFRTLLGNHADATNDFDKSI 353
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYE----EISKILQKLSEPSNPMHQFANEILGIS 171
D + ++ ASI ++ + E +K L++ + + + A +
Sbjct: 354 ELDPTMTQSY-----IKRASISLELGEPDKAEAEFAKALEQDNNDPDVYYHRAQ-----A 403
Query: 172 ALKFGKVQKAKTIFEE 187
G + A+ +++
Sbjct: 404 HFIKGDLADAQKDYQK 419
>gi|196232147|ref|ZP_03131002.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223869|gb|EDY18384.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 205
Score = 38.0 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNP-LSNMYIASILVAKGDTKNAAEIFLK 114
A L KLD+A S+++K+ + ++ ++ + A IL KG T++A ++ +
Sbjct: 127 ATNLEAQGKLDEALSTYQKVTTTYANSFSAPIALLAQARILAEKGKTEDARRLYEQ 182
>gi|163796436|ref|ZP_02190396.1| thioredoxin-related protein [alpha proteobacterium BAL199]
gi|159178286|gb|EDP62830.1| thioredoxin-related protein [alpha proteobacterium BAL199]
Length = 311
Score = 38.0 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 39/144 (27%), Gaps = 10/144 (6%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA- 109
+ V + QA L A + +++++ D + + I + D A
Sbjct: 136 SPVAQALEQADTLLEQGDHQSAGAIYQQVMGHDPENAPAFAGFLKCLIADGRLDEAKAVL 195
Query: 110 -EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+ D + + ++ +NP A L
Sbjct: 196 AQATDAFKADKAVQAVTTQLELAEQGAKA--AGELAAFQARVE-----ANPKDHQARLDL 248
Query: 169 GISALKFGKVQKAK-TIFEELAKD 191
+ G + A + + + D
Sbjct: 249 ASALYATGDTEGALDQLLDSIRID 272
>gi|84515140|ref|ZP_01002503.1| thioredoxin [Loktanella vestfoldensis SKA53]
gi|84511299|gb|EAQ07753.1| thioredoxin [Loktanella vestfoldensis SKA53]
Length = 302
Score = 38.0 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 10/129 (7%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA--EIFL 113
A ++ + DA +F IL +D + + + + D A
Sbjct: 133 AIEAAEQMLTEGAVTDAAETFAAILQEDPANAAAYAGLVRCYLALDDIDQAEAILNGAPA 192
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+++ D L+ A+ + E+ + ++P + A L ++
Sbjct: 193 EISTDPALEALHAQIILLREAA---NAGPVAELQAQV-----DADPANHQARFDLAVALH 244
Query: 174 KFGKVQKAK 182
G+V++A
Sbjct: 245 ANGQVEEAV 253
>gi|313206692|ref|YP_004045869.1| tpr domain protein [Riemerella anatipestifer DSM 15868]
gi|312446008|gb|ADQ82363.1| TPR domain protein [Riemerella anatipestifer DSM 15868]
Length = 237
Score = 38.0 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 69/193 (35%), Gaps = 14/193 (7%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
D + K + + K K++ + L+++S+ +F K + + A + +
Sbjct: 27 DQTALKSEKFLEKYS-KYLVGVFALVLVSILGYFAYQQFIVAPKNEEATKGYLAAQKNLS 85
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV--------AKGDTKNAAEIFLKVAN 117
+ A Y S + +G + A ++ +
Sbjct: 86 EGNNELALGGKSAANPGFLGTYQEFSGTKAGKLSAYNAGLLKFKEGKYQEAYDLLDAFKS 145
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM--HQFANEILGISALKF 175
D+ +A++Y A + ++ + + +++ + S +P + F + G+ A+
Sbjct: 146 DNKILMALKYGA-MGDCLSSLNKAD-DAMAQYDKASSTSDDPFTSYYFTRKA-GLVAISL 202
Query: 176 GKVQKAKTIFEEL 188
K AK FE +
Sbjct: 203 KKNADAKKYFEAI 215
>gi|302386876|ref|YP_003822698.1| TPR repeat-containing protein [Clostridium saccharolyticum WM1]
gi|302197504|gb|ADL05075.1| TPR repeat-containing protein [Clostridium saccharolyticum WM1]
Length = 259
Score = 38.0 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 3/146 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKL---YNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+E N D A +F++ +S L ++ Y A GD +AA+ + +
Sbjct: 37 AGIEALNQGNYDAAVEAFDQAISSSKGLVGKFDVDVLKYRAEAQYLAGDYSSAADTYDIL 96
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D ++ A S E+ + Q +E P A G + K
Sbjct: 97 IKVDGELPEYLNLRSVSRAGSGDLKGSIEDYKRSTQLDTEKKAPGRLNALLAAGEAMEKE 156
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTR 201
G A ++EE K+ + R
Sbjct: 157 GSASDAMNLYEEAVKEGEQSAQLYNR 182
>gi|327538352|gb|EGF25025.1| Serine/threonine protein kinase-related protein [Rhodopirellula
baltica WH47]
Length = 1922
Score = 38.0 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 10/197 (5%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
+ K + K + +A +L+ + + A + ++ + +
Sbjct: 655 KLEQSIQDRKARESRFKFLKRAVAAMLLFIFVGGAFALVTINAKEQEARQFAENAELRRK 714
Query: 62 ELFNSNKLDDARSSFE----KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
E K+ + + ++ + L+ +A K D +
Sbjct: 715 EAEEQRKIAEGATKQARNNLQLAEDNLD--RALAGEELAKKNAEKADANAKEAVENAKLA 772
Query: 118 DDLAPLAVRY--AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI-LGISALK 174
D A A R A L A + +++ +++ ++++ + ++I L + +
Sbjct: 773 DRNAKEAERNEKRAELNAEEARI-SANAALVAQEKAEIAQAEAEYESYVSQIGLAKARVD 831
Query: 175 FGKVQKAKTIFEELAKD 191
+ A+ I EL +D
Sbjct: 832 RNEFSDARRILSELTED 848
>gi|224024273|ref|ZP_03642639.1| hypothetical protein BACCOPRO_00996 [Bacteroides coprophilus DSM
18228]
gi|224017495|gb|EEF75507.1| hypothetical protein BACCOPRO_00996 [Bacteroides coprophilus DSM
18228]
Length = 1053
Score = 38.0 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 19/166 (11%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS--QDNKLYNP--------LSN 92
+GS+ + N QA++ F+ + D A S + ++ + P L +
Sbjct: 877 EGSYAGRAVYRAANLYQAMDQFSKRRYDAALKSIKASEEWPENLGVGKPYDDQIDKRLED 936
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA--ATLQAASILVDTSSYEEISKIL 150
A + KG+T A + KV P + R A L A L DT E K++
Sbjct: 937 YLEAKVYEKKGETAKAQTLLDKV---SSHPTSTRNFESAHLLTALALRDTGKQAEADKLV 993
Query: 151 QKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+ + +A+ G + +A+ + N +
Sbjct: 994 ASWKKD----FPESKPAQWCAAVYHGNMDQARELLSSRYASNETTP 1035
>gi|194289322|ref|YP_002005229.1| hypothetical protein RALTA_A1198 [Cupriavidus taiwanensis LMG
19424]
gi|193223157|emb|CAQ69162.1| conserved hypothetical protein, TPR repeats; putative exported
PROTEIN [Cupriavidus taiwanensis LMG 19424]
Length = 222
Score = 38.0 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+A + N+ + +DA F+++L+ + + + A L G A + F ++A D
Sbjct: 51 EAQQAANARRYEDAIKGFDRVLATNPRN--AQARFQRAWALAQAGREDEAIQAFSEMAQD 108
Query: 119 -DLAPLAVRYAATLQA 133
P A L A
Sbjct: 109 FPELPEPHNNLALLYA 124
>gi|315636888|ref|ZP_07892112.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478718|gb|EFU69427.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 447
Score = 38.0 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 39 FYLFDGSHEKKKNIVGEN-FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
Y+ + K+ + + F A + K +A + ++ +L +D + +A
Sbjct: 55 SYILLQQYTKENKLSSDTTFILARSAYEIGKFSEALNLYKNMLKEDPNNNRV--KLELAQ 112
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
A ++ +V + P V+
Sbjct: 113 TYFQLKQYDEAKALYEEVLKEPDLPENVK 141
>gi|315023759|gb|EFT36761.1| TPR domain protein [Riemerella anatipestifer RA-YM]
gi|325335868|gb|ADZ12142.1| hypothetical protein RIA_1023 [Riemerella anatipestifer RA-GD]
Length = 237
Score = 38.0 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 70/193 (36%), Gaps = 14/193 (7%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
D + K + + K K++ + L+++S+ +F K + + A + +
Sbjct: 27 DQTALKSEKFLEKYS-KYLVGVFALVLVSILGYFAYQQFIVAPKNEEATKGYLAAQKNLS 85
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV--------AKGDTKNAAEIFLKVAN 117
+ A +Y S + +G + A ++ +
Sbjct: 86 EGNNELALGGKSAANPGFLGIYQEFSGTKAGKLSAYNAGLLKFKEGKFQEAYDLLDAFKS 145
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM--HQFANEILGISALKF 175
D+ +A++Y A + ++ S + +++ + S +P + F + G+ A+
Sbjct: 146 DNKILMALKYGA-MGDCLSNLNKSD-DAMAQYDKASSTSDDPFTSYYFTRKA-GLVAISL 202
Query: 176 GKVQKAKTIFEEL 188
K AK FE +
Sbjct: 203 KKNADAKKYFEAI 215
>gi|325107034|ref|YP_004268102.1| hypothetical protein Plabr_0453 [Planctomyces brasiliensis DSM
5305]
gi|324967302|gb|ADY58080.1| hypothetical protein Plabr_0453 [Planctomyces brasiliensis DSM
5305]
Length = 351
Score = 38.0 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 12/148 (8%)
Query: 50 KNIVGENFAQALE-----LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+N + +AL+ S+ +A ++F KI + + A + +A+G
Sbjct: 147 RNADSFRYYEALDMLGQLQLASSNYAEAEAAFTKIEQSPFDDWKLSAKSSKARVQLAQGQ 206
Query: 105 TKNAAEIFLKVANDDLAPLA--VRYA-ATLQAASILVDTSSYEE----ISKILQKLSEPS 157
A F V N A R A L AS L + +++ ++ ++ K+SE +
Sbjct: 207 IDQAISGFDSVINAPAKDDATKQRQLEAMLGKASALNQKNQFDQSLTLLADVIAKISEDN 266
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIF 185
+ A G + L GK Q+A F
Sbjct: 267 ARLQAEAQVRRGTALLGQGKNQEALMAF 294
>gi|262091698|gb|ACY25288.1| hypothetical protein [uncultured actinobacterium]
Length = 255
Score = 38.0 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 58/150 (38%), Gaps = 12/150 (8%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNK---LYNPLSNMYIASILVAKGDTKNAAEIFLK 114
L L+ + DA E+ + + L++ Y A + K D E++ +
Sbjct: 105 IAGLSLYRLGQWRDAADHLEQARAVSGGEVLNHPVLADCYRALMRYEKVD-----ELWRE 159
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH-QFANEILGISAL 173
+ P + + AA L D + +++Q + + E ++ L
Sbjct: 160 LKEASPDPEIIAE-GRIVAAGALADKGDVQAAVRLMQLAKQDPAKVREHHLREWYVLADL 218
Query: 174 --KFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ G + A++IF+ +A ++++ + R
Sbjct: 219 YDRSGDLINARSIFQRIAANDSNFSDVRDR 248
>gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 792
Score = 38.0 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-L 113
E F AL+ + +L +A S + +IL+ L + ++ G T+ A E
Sbjct: 5 EAFQIALQHHQAGRLVEAESLYRQILAVQPGHAETLHLL--GALAQQVGRTEMAIEFMRQ 62
Query: 114 KVANDDLAPLAVRYA-ATLQAASILVDTSSYEEISKILQK 152
+A D A+ ATL A + + Y + +
Sbjct: 63 AIAADPNHAAALSNLAATLLAGGRAGEAAEYARRAVEVAP 102
>gi|260429364|ref|ZP_05783341.1| HemY domain protein [Citreicella sp. SE45]
gi|260419987|gb|EEX13240.1| HemY domain protein [Citreicella sp. SE45]
Length = 514
Score = 38.0 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 9/196 (4%)
Query: 19 CCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEK 78
+K ++ L+ L+ L ++ A+ + +S + A + +K
Sbjct: 61 VVFKLVSLLIALLKFINGDDTALSRYFDRNRERKGYHALAEGMLALSSGEGKLAMAKAQK 120
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK-VANDDLAPLAVRYAATLQAASIL 137
++ L+N+ A GDT+ A E++ K +AND+ + +R L+ A
Sbjct: 121 ADRYLHR--PALTNLLTAQAAEMTGDTRKAEEVYKKLIANDETRFVGIRGMMKLKLAKGD 178
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
DT+ L + + P H + L + + A+ K P
Sbjct: 179 TDTA------LKLAERAFALKPKHAEIQDTLLQLQAQKHDWRGARQTLSAKLKHGALPRD 232
Query: 198 ISTRSQMILANIIASD 213
+ R +LA A D
Sbjct: 233 VYRRRDAVLALSEAKD 248
>gi|148252588|ref|YP_001237173.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1]
gi|146404761|gb|ABQ33267.1| putative TPR repeat containing protein [Bradyrhizobium sp. BTAi1]
Length = 800
Score = 38.0 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-AP 122
N ++A S ++ L ++ N + AS+ +A+GD A + V DD A
Sbjct: 628 ANEKSFNEAASILKEGLKENPDNLNL--RLSQASLSLARGDNDGAIAAYEAVLKDDPNAL 685
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
LAV A+L D +S + ++ ++L P + + +K G +A
Sbjct: 686 LAVNNLASLLLDE-RTDKASLDRAVQLAERLKSSDLPQF---QDTYAWAQVKRGNTAEAV 741
Query: 183 TIFEEL 188
+ E +
Sbjct: 742 KLLESV 747
Score = 36.1 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 55/148 (37%), Gaps = 8/148 (5%)
Query: 43 DGSHEKKKNIVGENFAQALELFN----SNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
E + G+ F + L + LD A S E ++ + +A +
Sbjct: 295 QEQLESRIKAGGDVFPYQMSLADLDYLQGNLDQATSLLESVVKTAAPDRALAAKNRLAQV 354
Query: 99 LVAKGDTKNAAEIFLKVA-NDDLAPLAVRYAATLQAASILVDTSSYEEISKIL--QKLSE 155
+ +G+T+ A ++ +V D A++ A ++ + VD + ++ + L + S
Sbjct: 355 YIRRGNTEMANKLVSEVLEKDRRNTGALKLRAAMRLDAGQVD-GAIADLREALNNEPKSP 413
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKT 183
M A E G + L + A
Sbjct: 414 ELLLMFGAAFERSGKAELAARQYADAAK 441
>gi|241763188|ref|ZP_04761247.1| TPR repeat-containing protein [Acidovorax delafieldii 2AN]
gi|241367687|gb|EER61953.1| TPR repeat-containing protein [Acidovorax delafieldii 2AN]
Length = 665
Score = 38.0 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 55/163 (33%), Gaps = 12/163 (7%)
Query: 48 KKKNIVGE-----NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ +G+ F + L K A +FE ++ + + + A
Sbjct: 461 ATADALGDGNGNARFNTGVALQQQQKHAQALQAFEAAQAKGFTGQSL--HYHRGESAFAL 518
Query: 103 GDTKNAAEIFLKVANDDLA----PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
G A + F ++ L+ A + + ++ + L + +
Sbjct: 519 GQFSQAFQSFDAALKTPSDAIDGSKKMQQLLRLRRAESAIGANQFDTAIEDFNLLLQ-QS 577
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
P + LG++ + G+ +A +F++L + +P R
Sbjct: 578 PSNPRLELGLGMALIGKGETTRAIHLFDQLLARSPNPAAFYGR 620
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+A +N+ D A F +L Q + +A L+ KG+T A +F ++
Sbjct: 550 RLRRAESAIGANQFDTAIEDFNLLLQQSPSNPRLELGLGMA--LIGKGETTRAIHLFDQL 607
Query: 116 ANDDLAPLAV--RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
P A R A +A + S +++ + ++ +P NP ++ + + +
Sbjct: 608 LARSPNPAAFYGRGIAHDRAGN---QAQSLKDLDQAIRL--DPRNPQYRSVRDQIAAA 660
>gi|218781014|ref|YP_002432332.1| hypothetical protein Dalk_3174 [Desulfatibacillum alkenivorans
AK-01]
gi|218762398|gb|ACL04864.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
AK-01]
Length = 667
Score = 38.0 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 7/127 (5%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L A + + + L LS + ++LV G A + K
Sbjct: 453 ANALAAQGDYSGAEAHYREALRLKPGAVRALSRL--GALLVRMGRPDEAVPLLEKAL--R 508
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
P TL A +D E + +P A + L ++ G+ +
Sbjct: 509 ADPAGEEPLTTLAGALASLDMLHQAEKYYRT---AMDLHPDSGAAAQGLAEVLVRTGRPE 565
Query: 180 KAKTIFE 186
+A + E
Sbjct: 566 EAAPLLE 572
>gi|119470961|ref|ZP_01613545.1| putative unknown membrane associated protein [Alteromonadales
bacterium TW-7]
gi|119445983|gb|EAW27263.1| putative unknown membrane associated protein [Alteromonadales
bacterium TW-7]
Length = 442
Score = 38.0 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKI-LSQDNKLYNPLSNMYI--ASILVAKGDTK 106
+ V A+A +L + + + I + ++ M+ I + D
Sbjct: 56 REKVYSQLARAQKLADDGDVKAGLEALGSINERSSSMNSYEIAMMHNFYGFIYYNQNDLP 115
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
A F +V ++ P +R + T A + + S Y+++
Sbjct: 116 KAIASFERVVAEEGIPQTLRLSTTFSLAQLAMANSDYDKVIA 157
>gi|162448577|ref|YP_001610944.1| protein kinase [Sorangium cellulosum 'So ce 56']
gi|161159159|emb|CAN90464.1| Protein kinase [Sorangium cellulosum 'So ce 56']
Length = 1576
Score = 38.0 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 3/140 (2%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN--DDL 120
L + D A + + + P + A + + +GDT A +V + +
Sbjct: 516 LLDRGHFDAAAEALGRHEGGGSAAAVPALTLARARLAMNRGDTARALAELGRVKDQVEAS 575
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A+ +LQ A LV Y E + + E P+ A E+ G S +
Sbjct: 576 DDHALAAFWSLQMARALVRAGDYGEAERRAGEAVERVGPLKIEA-ELTGASRPELATAAA 634
Query: 181 AKTIFEELAKDNNSPFGIST 200
E + + + G++
Sbjct: 635 FGASPEAIVAEAVATRGLAQ 654
>gi|150003900|ref|YP_001298644.1| hypothetical protein BVU_1333 [Bacteroides vulgatus ATCC 8482]
gi|149932324|gb|ABR39022.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 967
Score = 38.0 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ A +K+L N Y+ + + A + D + A I+ ++ D A + R
Sbjct: 747 YESAARHLDKVLEYPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQL-KDKAASMERRRL 805
Query: 129 AT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
A L++A +L + EEI L + + +NE + L GK A
Sbjct: 806 AKTGMLRSAHML---GNEEEIIFAATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDGAM 862
Query: 183 TIFEELAKDN 192
+ LAKD
Sbjct: 863 EDLKVLAKDT 872
>gi|115522438|ref|YP_779349.1| thioredoxin domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115516385|gb|ABJ04369.1| Thioredoxin domain [Rhodopseudomonas palustris BisA53]
Length = 306
Score = 38.0 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 10/129 (7%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
A S F ++L D L+ M A VA G + A + + P
Sbjct: 145 LAEGDPATAASIFAEVLGTDGTSVPALAGM--ARCYVATGALERAKQTLAMI------PE 196
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEILGISALKFGKVQKA 181
A R ++A +D + + +L ++P+ A L ++ G+ +A
Sbjct: 197 AQREDQAVKAVQAAIDLAEQASALGPIAELEQKVAADPLDHQARFDLALAKNAAGQRDEA 256
Query: 182 KTIFEELAK 190
T E+ K
Sbjct: 257 TTHLLEIVK 265
>gi|254880860|ref|ZP_05253570.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
gi|254833653|gb|EET13962.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
Length = 967
Score = 38.0 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ A +K+L N Y+ + + A + D + A I+ ++ D A + R
Sbjct: 747 YESAARHLDKVLEYPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQL-KDKAASMERRRL 805
Query: 129 AT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
A L++A +L + EEI L + + +NE + L GK A
Sbjct: 806 AKTGMLRSAHML---GNEEEIIFAATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDGAM 862
Query: 183 TIFEELAKDN 192
+ LAKD
Sbjct: 863 EDLKVLAKDT 872
>gi|109732340|gb|AAI15725.1| Nphp3 protein [Mus musculus]
Length = 1204
Score = 38.0 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 64/191 (33%), Gaps = 27/191 (14%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K + + ++L+ + +++ ++ + + L + A + +
Sbjct: 782 YWQFVGKDKGAMATEYFESLKQYENSEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 841
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV----DTSS-YEEISKILQKLSEP 156
+ + EI + A D P + L + D Y++ +I +
Sbjct: 842 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFGDAEQLYKQALEISENAYGA 895
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE---LAKDNNSPFG--------ISTRSQ 203
+P A E+ ++ K K ++A F + + + + + R+
Sbjct: 896 DHP--HAARELEALATLYHKQNKYEQA-EHFRKKSVIIRQQATRRKGSLYGFALLRRRAL 952
Query: 204 MILANIIASDQ 214
+ + D+
Sbjct: 953 QLEELTLGKDK 963
>gi|255567975|ref|XP_002524965.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
gi|223535800|gb|EEF37462.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
Length = 1101
Score = 38.0 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 9/133 (6%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-K 114
++ + N K A S F++IL++D Y + + + + + + A F
Sbjct: 349 RLSRGIAQVNEGKYASAISIFDQILTEDPT-YPE-ALIGRGTAHAFQRELEAAIADFSKA 406
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+ ++ LA A + +AA + + +++K L+ ++ +H+ GI K
Sbjct: 407 IQSNPLAGEAWKRRGQARAA-LGESIEAIHDLTKALEFEPNSADILHER-----GIVNFK 460
Query: 175 FGKVQKAKTIFEE 187
F A
Sbjct: 461 FKDFDAAVQDLSA 473
>gi|109121105|ref|XP_001086487.1| PREDICTED: dnaJ homolog subfamily C member 3 isoform 2 [Macaca
mulatta]
Length = 504
Score = 38.0 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 22/144 (15%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L + +L DA S F + D Y ++ A++ +A G +K A KV +
Sbjct: 46 KLLAAGQLADALSQFHAAVDGDPDNY--IAYYRRATVFLAMGKSKAALPDLTKVIQLKMD 103
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL------------- 168
A A LQ +L+ +E +K+ + SNP E
Sbjct: 104 FTA----ARLQRGHLLLKQGKLDEAEDDFKKVLK-SNPSENEEKEAQSQLIKSDEMQRLR 158
Query: 169 --GISALKFGKVQKAKTIFEELAK 190
+ A + G A +++ +
Sbjct: 159 SQALDAFESGDYAAAIAFLDKILE 182
>gi|330993284|ref|ZP_08317220.1| Cellulose synthase 1 operon protein C [Gluconacetobacter sp.
SXCC-1]
gi|329759686|gb|EGG76194.1| Cellulose synthase 1 operon protein C [Gluconacetobacter sp.
SXCC-1]
Length = 1324
Score = 38.0 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 54/151 (35%), Gaps = 5/151 (3%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ G A + ++ A ++ +L++D L+ M +A + +A+G T
Sbjct: 400 RQSGQFTGATLMLADLQRTTGQMGAAEQEYQSVLARDPNS--QLALMGLARVEMAQGKTA 457
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A ++ +V + + L AA+ S+ + P +P
Sbjct: 458 EARQLLSRVGSQYATQVGEIEVTGLMAAASQTSDSARKVSILREAMAQAPRDPW---VRI 514
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
L + + G + +A + + + + +
Sbjct: 515 NLANALQQQGDMAEANRVMQPILSNPVTAQD 545
>gi|167385855|ref|XP_001737518.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899674|gb|EDR26218.1| hypothetical protein EDI_076340 [Entamoeba dispar SAW760]
Length = 234
Score = 38.0 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 29 ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYN 88
IL+I S+ + + K+N G NF AL +N K D+A S
Sbjct: 16 ILIISSIKLGKDVTQFEETMKQN--GMNFELALAKYNIEKYDEAFSLLGSDEKD------ 67
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL--AVRYAATLQAASILVDTSSYEEI 146
+ A IL +G AA+I+ +V P + A A I+ D S +
Sbjct: 68 ---KVLKAQILQKQGKFNEAAKIYTEVLEITKQPKTGILTNLA----ACIVSDQSIDSSL 120
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
K S+ + + A + L+ G++ KA++ F +
Sbjct: 121 LG--TKTSDYISETYGNA----ALIMLRKGEITKAESYFNK 155
>gi|332519705|ref|ZP_08396169.1| hypothetical protein LacalDRAFT_0782 [Lacinutrix algicola 5H-3-7-4]
gi|332044264|gb|EGI80458.1| hypothetical protein LacalDRAFT_0782 [Lacinutrix algicola 5H-3-7-4]
Length = 242
Score = 38.0 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 64/190 (33%), Gaps = 26/190 (13%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
E+ + K K ++ A ++IL+ +S + F +++ N + +
Sbjct: 63 ETEIETRDNKQTSK--SFNWRIAASIIILLGVSWFGYQTFFGVNYQDLYNANYQEYP--- 117
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+ A + + + S + A + D +NA +F + D
Sbjct: 118 ------NTEYAITRSDTVDSPE----------RRAFVAYEAQDFENAITLFENLPVDVKK 161
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P + Y A A + T E+ I + + P + L + ALK +A
Sbjct: 162 PYHIFYKAQ---AYLK--TGEIEKSKVIFKSIISEGKPFKAESYWYLAMIALKEKDKNEA 216
Query: 182 KTIFEELAKD 191
+ L D
Sbjct: 217 LKYLKILKAD 226
>gi|319788000|ref|YP_004147475.1| cellulose synthase operon C domain protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317466512|gb|ADV28244.1| cellulose synthase operon C domain protein [Pseudoxanthomonas
suwonensis 11-1]
Length = 1499
Score = 38.0 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 15/156 (9%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ G +L + A + + K L D L + +L +G AA
Sbjct: 378 REPAGHVLLA--QLQEGSDPAAAEAGYRKALELDPANAGALQGLV--GLLGRQGRAAEAA 433
Query: 110 EIFLKVA-----NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK--LSEPSNPMHQ 162
++ ++ A A +A L + L+ L + +P
Sbjct: 434 SLYERLTPEQRERAGGAGALRASLARARAQEALA-AGDLDTARIELEDALLEDGRDPWL- 491
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
L + G+ +A+ I + L + SP +
Sbjct: 492 --RLELARLYQRAGRPDQARGIMDGLLAIDESPQTL 525
>gi|319639870|ref|ZP_07994599.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A]
gi|317388534|gb|EFV69384.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A]
Length = 960
Score = 38.0 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ A +K+L N Y+ + + A + D + A I+ ++ D A + R
Sbjct: 740 YESAARHLDKVLEYPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQL-KDKAASMERRRL 798
Query: 129 AT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
A L++A +L + EEI L + + +NE + L GK A
Sbjct: 799 AKTGMLRSAHML---GNEEEIIFAATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDGAM 855
Query: 183 TIFEELAKDN 192
+ LAKD
Sbjct: 856 EDLKVLAKDT 865
>gi|294775054|ref|ZP_06740583.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510]
gi|294451098|gb|EFG19569.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510]
Length = 960
Score = 38.0 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ A +K+L N Y+ + + A + D + A I+ ++ D A + R
Sbjct: 740 YESAARHLDKVLEYPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQL-KDKAASMERRRL 798
Query: 129 AT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
A L++A +L + EEI L + + +NE + L GK A
Sbjct: 799 AKTGMLRSAHML---GNEEEIIFAATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDGAM 855
Query: 183 TIFEELAKDN 192
+ LAKD
Sbjct: 856 EDLKVLAKDT 865
>gi|224370035|ref|YP_002604199.1| hypothetical protein HRM2_29480 [Desulfobacterium autotrophicum
HRM2]
gi|223692752|gb|ACN16035.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 829
Score = 38.0 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+ + G F Q + L+ + + +A +FEK+ + K N+ A + GD +
Sbjct: 600 GRADDSGTLFLQGVNLYKAGQFQEAAVAFEKVAANGIKNGQLYYNIGNACLKA--GDLGH 657
Query: 108 AAEIFLKVANDDLAPLAVR 126
A + + +R
Sbjct: 658 AILWYERAVKLTPRDPDLR 676
>gi|113868336|ref|YP_726825.1| transmembrane protein [Ralstonia eutropha H16]
gi|113527112|emb|CAJ93457.1| Transmembrane protein [Ralstonia eutropha H16]
Length = 210
Score = 38.0 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 68/203 (33%), Gaps = 9/203 (4%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + K + W+ + +L W Y K+ + Q
Sbjct: 5 LEEQEQLENLKAWWRQYGNALTWVLIVALLAFAGWNGWKYW----ERKQAGEAAVLYEQV 60
Query: 61 LELFNSNKLDDARSSFEKIL-SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
L+ + ++ + + + Y +S + +L GD AA+ L+ A D
Sbjct: 61 LKAAEARDIERIKRAATDLEDKYGRTAYGQMSALVAGRVLYDAGDLA-AAKSQLQWAIDH 119
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKIL--QKLSEPSNPMHQFANEILGISALKFGK 177
+ A ++ A +L+D +Y++ +L + + ++L +
Sbjct: 120 G-DQEYSHLARVRLAGVLLDEKAYDKGLALLKDEPPAAFVALYADRRGDLLAAQDKRDDA 178
Query: 178 VQKAKTIFEELAKDNNSPFGIST 200
+ ++L ++ + I
Sbjct: 179 RTAYRKALDKLGQEEPAMRQIIQ 201
>gi|332709028|ref|ZP_08428998.1| hypothetical protein LYNGBM3L_33580 [Lyngbya majuscula 3L]
gi|332352217|gb|EGJ31787.1| hypothetical protein LYNGBM3L_33580 [Lyngbya majuscula 3L]
Length = 842
Score = 38.0 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 70/203 (34%), Gaps = 17/203 (8%)
Query: 1 MESNNDANSYKGKCKMGKC-CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENF-- 57
+E N + ++ + + + L ++ L +WF+ +G
Sbjct: 556 LEGKKVTNPKQKGSRLPRSPVWIGLGATGTLALVLLGVWFF-----QNPPSPGLGRQLPP 610
Query: 58 --AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
++ ++ N N + I Q N + L+ +G A+ +V
Sbjct: 611 GLSKPVDYSNVNLTKAKTKTVTAIAIQAFSEGNIIRGTEAVRALLDRGALPQASAALQEV 670
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSS----YEEISKILQKLSEPSNPMHQFANEILGIS 171
+ + ++ + A + T S ++++ + ++ + P LG +
Sbjct: 671 PS-EQLNKSMVSFLRGRLAWQSIQTGSDEYSFDDVRRYWER-AVKQEPDSWTYRNALGFA 728
Query: 172 ALKFGKVQKAKT-IFEELAKDNN 193
GK ++A ++ L + +N
Sbjct: 729 YYAEGKYERANQAWYDALYRSSN 751
>gi|254785903|ref|YP_003073332.1| response regulator receiver domain-containing protein
[Teredinibacter turnerae T7901]
gi|237684491|gb|ACR11755.1| response regulator receiver domain protein [Teredinibacter turnerae
T7901]
Length = 541
Score = 38.0 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 53/123 (43%), Gaps = 7/123 (5%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A A+ ++ + A E++ + + + ++ + ++L+++GD A ++ +
Sbjct: 134 DALAPAMRALDAKEHAVAAQVLEQVAGRQTR-HAVAAHKMLGTVLLSQGDLDRAEALYTR 192
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A A ++ A +D + E + KI+++ NPM A + L + K
Sbjct: 193 ALEVRQLDWARLGLAQVRQARGDLDLAG-EWLQKIVEE-----NPMFLPAYDSLAENWNK 246
Query: 175 FGK 177
G
Sbjct: 247 RGD 249
>gi|303273688|ref|XP_003056197.1| PsbB mRNA maturation factor Mbb1, chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226462281|gb|EEH59573.1| PsbB mRNA maturation factor Mbb1, chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 586
Score = 38.0 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 53/145 (36%), Gaps = 13/145 (8%)
Query: 47 EKKKNIVGENFAQALELFN--SNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKG 103
QA L D AR F++ L D + Y LS A +G
Sbjct: 303 RTDAGSQSAALWQAWALLESREGNSDIARKLFQRGLQSDPENRYIWLS---WAVHESRQG 359
Query: 104 DTKNAAEIFLKVAN-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
A + +K + P ++ A L+AA + +++ L + +P+HQ
Sbjct: 360 YVDRARSLLVKGCKLNPRDPPLLQALARLEAADGNI------SVARKLFEQGTKLDPLHQ 413
Query: 163 FANEILGISALKFGKVQKAKTIFEE 187
+ ++ K G V +A+ + +
Sbjct: 414 ANWQAWALAEWKDGDVARARELLQR 438
>gi|327484226|gb|AEA78633.1| Type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae
LMA3894-4]
Length = 237
Score = 38.0 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 10/171 (5%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L+I + + + + + + A L + + AR + EK L
Sbjct: 8 GLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPD 67
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y S + +A A G+ +A +++ ++ + T L Y+
Sbjct: 68 YYR--SQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTF-----LCKQGEYD 120
Query: 145 EISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKTIFE-ELAKDNN 193
+ ++ E A+ E G+ ALK GK+ A+ F+ + D N
Sbjct: 121 TADQYFRRAVEQPYYYLISASYENAGLCALKAGKMDNAREYFKRAIDHDPN 171
>gi|159030624|emb|CAO88292.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 722
Score = 38.0 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 62/167 (37%), Gaps = 20/167 (11%)
Query: 34 SLAIWFYLFDGSHEKKKNIVG-------ENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
++ Y G +EK + + A L + KL +ARS+++K++ +
Sbjct: 236 AMIGAGYWQSGLYEKAYKAYAKATPSPEQAYRYARGLQIAKKLPEARSAYQKLIKTYPQA 295
Query: 87 YNP-LSNMYIASILVAKGDTKNAAEIFLKVAND--DLAPLAVRYAATLQ-AASILVDTSS 142
L + +A I + +A ++ D AP A+ A L + + + +
Sbjct: 296 PETGLGLLRLAQISPNR----DAIAYLDRIVKQFPDRAPEALEAKAKLLNSTNAQAASQT 351
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
++ + S+ + ++ A K G KA + +A
Sbjct: 352 WQTLLNKY-PKSDEAADYRW----LMAQRAAKSGDYAKAWQWAQPIA 393
>gi|218247929|ref|YP_002373300.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
gi|218168407|gb|ACK67144.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 270
Score = 38.0 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 15/131 (11%)
Query: 64 FNSNKLDDARSSFEK---ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DD 119
+ NKLD+A + F + + + Y + + L +G + A + V D
Sbjct: 85 VSQNKLDEAIADFNQAITLAPNEPDPY-----LNRGAALEGQGKYQEAIADYNHVLELDP 139
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+A + + + E+ K ++ P FA + +++ + G Q
Sbjct: 140 HDAMAYNNRGNAEGGLGQWEKA-LEDYQKAVE-----IQPNFAFAKANVALASYQLGNTQ 193
Query: 180 KAKTIFEELAK 190
+A ++ +
Sbjct: 194 EALNQMRKIVR 204
>gi|299136452|ref|ZP_07029635.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
gi|298600967|gb|EFI57122.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
Length = 740
Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 15/143 (10%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI-----ASILVAKGDTKNAAEI-- 111
AL L ++ A + K ++ + A+I + A +
Sbjct: 577 AALALARIGQIARAEAISRKATAESP--LDTQLQFVELPSVNAAIAMQHNQPDEAVKALE 634
Query: 112 ----FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
+ +V L+P R A LQ ++ + + + + P++P +
Sbjct: 635 PARPYDQVVVMGLSPAYYRGLAYLQGRHWQQASAEFRSVLD--HRAASPNSPYILLSQLE 692
Query: 168 LGISALKFGKVQKAKTIFEELAK 190
LG + G Q+A F++L +
Sbjct: 693 LGHALQLSGNSQEATAQFQQLEE 715
>gi|254561443|ref|YP_003068538.1| thioredoxin [Methylobacterium extorquens DM4]
gi|254268721|emb|CAX24682.1| thioredoxin [Methylobacterium extorquens DM4]
Length = 302
Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ + + +A + ++ L A + +L ++ + ++ + A + G+T++A +
Sbjct: 128 SEIDQVLEEAAAVASAGDLPAASELYAAVLREEPENLKAIAGL--AKTQLELGETESAEQ 185
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ D A ++AA L + + +++ + +++ N A L
Sbjct: 186 VLAMAPPDKADDPLF---AGVRAALELAEQAGTLGDLAALQKRIEADPNDFQ--ARFDLA 240
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ GK ++A +A+ + S + R Q++
Sbjct: 241 LGLNAAGKREEAVDQLVAIARADRSWNEDAARKQLLQ 277
>gi|229056381|ref|ZP_04195795.1| Transcriptional regulator, LytR [Bacillus cereus AH603]
gi|228720945|gb|EEL72492.1| Transcriptional regulator, LytR [Bacillus cereus AH603]
Length = 389
Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE 55
+ NN+ + KG+ K + + + PLLI+ + + F+++ + N E
Sbjct: 5 DINNETRAKKGRSKKKRLLWFILIPLLIVAMGAGGYSFHIYSKAKSVLSNAYSE 58
>gi|163938529|ref|YP_001643413.1| cell envelope-related transcriptional attenuator [Bacillus
weihenstephanensis KBAB4]
gi|229010032|ref|ZP_04167246.1| Transcriptional regulator, LytR [Bacillus mycoides DSM 2048]
gi|229131545|ref|ZP_04260432.1| Transcriptional regulator, LytR [Bacillus cereus BDRD-ST196]
gi|163860726|gb|ABY41785.1| cell envelope-related transcriptional attenuator [Bacillus
weihenstephanensis KBAB4]
gi|228651924|gb|EEL07874.1| Transcriptional regulator, LytR [Bacillus cereus BDRD-ST196]
gi|228751165|gb|EEM00977.1| Transcriptional regulator, LytR [Bacillus mycoides DSM 2048]
Length = 338
Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE 55
+ NN+ + KG+ K + + + PLLI+ + + F+++ + N E
Sbjct: 5 DINNETRAKKGRSKKKRLLWFILIPLLIVAMGAGGYSFHIYSKAKSVLSNAYSE 58
>gi|193214158|ref|YP_001995357.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193087635|gb|ACF12910.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
Length = 1033
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 5/74 (6%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
G+ F + L +LD+A+ + I L M I G+ A +
Sbjct: 455 KAGDVFKNVIGLIEQKRLDEAQKELDSIEQDG-----ALKQMLQGLIYDESGNFNEAEKF 509
Query: 112 FLKVANDDLAPLAV 125
+L ++
Sbjct: 510 YLMAIDNGDVGAMF 523
>gi|116329528|ref|YP_799248.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116329843|ref|YP_799561.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122272|gb|ABJ80315.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123532|gb|ABJ74803.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 302
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ + F +AL L K +A +E ++ + K S + + ++ +G+++ A EI+
Sbjct: 6 ISKTFNRALALEKEGKYPEAAQLYESLIQSEPKHQK--SYLNLGALYSKQGNSRKAIEIY 63
Query: 113 LKVANDDLAPLAV 125
K P
Sbjct: 64 QKALEIGKTPELY 76
>gi|194290004|ref|YP_002005911.1| hypothetical protein RALTA_A1907 [Cupriavidus taiwanensis LMG
19424]
gi|193223839|emb|CAQ69848.1| conserved hypothetical protein yfgM [Cupriavidus taiwanensis LMG
19424]
Length = 210
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 76/210 (36%), Gaps = 7/210 (3%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF 64
+ + + + LI+ +L+ A W + K+ + Q ++
Sbjct: 6 EEQEQLENLKAWWRQYGNALTWALIVALLAFAGWN-GWKYWERKQAGEAAVLYEQVMKAA 64
Query: 65 NSNKLDDARSSFEKIL-SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ + + + + Y +S + + +L GD +AA+ L+ A D
Sbjct: 65 EARDAERIKRAATDLEGKYGRTAYGQMSALVASRVLYDAGDL-SAAKSQLQWAIDHG-DE 122
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A + A ++ A +L+D +Y++ +L+ + ++A K A+T
Sbjct: 123 AYSHLARVRLAGVLLDEKAYDQGLALLKDEPPAAFVALYADRRGDLLAA--QDKRDDART 180
Query: 184 IFEELAKD-NNSPFGISTRSQMILANIIAS 212
+ + + G+ Q L + A+
Sbjct: 181 AYRKALDTLGQAEAGMRQIIQFKLDALGAA 210
>gi|119476278|ref|ZP_01616629.1| Cytochrome c biogenesis factor [marine gamma proteobacterium
HTCC2143]
gi|119450142|gb|EAW31377.1| Cytochrome c biogenesis factor [marine gamma proteobacterium
HTCC2143]
Length = 411
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 11/192 (5%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+ P++ +++ +D + K + +A E + E+ D
Sbjct: 102 LIPIVAVVVYQQTGAKADWDIAQTLKNMRLKTADGEAAETDVKQLIRQVEERLEQ--RPD 159
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
N Y M +A+ + + AA + ++ +V A A L +
Sbjct: 160 NGSY----LMLLANQQMGLRNYPAAAAAYQRLRTIYPDDASV--LAQYAQAMYLSSDRTL 213
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
+ +L+ +P +LG++ + G Q+A ++ L + R +
Sbjct: 214 TTKVTDMAELALRQDPQQPTVLSMLGMAHFEQGDYQRAIDYWQRLL--PSLGPVSPNR-K 270
Query: 204 MILANIIASDQR 215
+I+A I + R
Sbjct: 271 IIMAGIEQAKSR 282
>gi|322830836|ref|YP_004210863.1| cellulose synthase operon C domain protein [Rahnella sp. Y9602]
gi|321166037|gb|ADW71736.1| cellulose synthase operon C domain protein [Rahnella sp. Y9602]
Length = 1320
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 11/159 (6%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+ S++ + + A+A + S D A ++ + + +++
Sbjct: 329 AAQGGPNSAQLSNQAQDSAFYAQLAKAKDAAGSGSYDAALAAVTPLTQVGGEKGQS-ASL 387
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ---AASILVDTSSYEEISKIL 150
A IL KGD A + + + ++ A + Y Q A + V + I +
Sbjct: 388 LRADILRRKGDLAGAEQQYSALGDNADARAGLYYVLRQQNKTAEASQVLKTLPAGIQAKM 447
Query: 151 QKLSEPS--NPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ PM + A + + Q+A I ++
Sbjct: 448 NPPTVADVIEPMRRQAAQAVA-----NNDPQRALNILQQ 481
>gi|119485107|ref|ZP_01619492.1| hypothetical protein L8106_06654 [Lyngbya sp. PCC 8106]
gi|119457335|gb|EAW38460.1| hypothetical protein L8106_06654 [Lyngbya sp. PCC 8106]
Length = 385
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 83/222 (37%), Gaps = 27/222 (12%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLA--------IWFYLFDGSHEKKKNI 52
ME+ D+ + K + K ++ +L+ + ++ + S+ + +
Sbjct: 1 METVQDSRTTHTKQAVYKPIRLIVSSILVAFVATVTPQMAHSVEVVAQANTQSNTQSTDQ 60
Query: 53 VGENFAQALELFNSNKLDDARSSF---EKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ + Q EL ++ K+D+A + + D K+Y+ ++ + +G+ + AA
Sbjct: 61 LNQLLEQGRELVDAGKIDEAVLVYVQAAGLDPSDPKIYSGIAYL-----EALRGNYQAAA 115
Query: 110 EIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+ + + D P A LV + Y + +K + P A L
Sbjct: 116 KFYRDALVLDPQNPDFQYGLA-----YSLVKSEDYRGAADAYRK-AISLKPDLLNAYLGL 169
Query: 169 GISALKFGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILANI 209
+S + G A +E +A D P + M +A +
Sbjct: 170 AVSLFRQGDYGSAVKTYEMVIASD---PNNWQAYASMGMALL 208
>gi|329956615|ref|ZP_08297188.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
gi|328523987|gb|EGF51063.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
Length = 1010
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G AAE F + D++ R A T Y ++ IL +++ + + Q
Sbjct: 268 GKYHEAAEAFNQYLKDNVESTRRRD-ALYMLGMSYYQTGVYSQVPVILGEVTTDKDALTQ 326
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
A +G++ L+ KA+ FE+ A +++ I ++
Sbjct: 327 NAYLHMGLAYLQLADRNKARMAFEQ-AAASDADQKIKEQA 365
>gi|283852035|ref|ZP_06369310.1| glycosyl transferase family 9 [Desulfovibrio sp. FW1012B]
gi|283572585|gb|EFC20570.1| glycosyl transferase family 9 [Desulfovibrio sp. FW1012B]
Length = 1812
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 42/141 (29%), Gaps = 16/141 (11%)
Query: 72 ARSSFEKILSQDNKL-------YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
A + E + D + L+ +A + A D + P
Sbjct: 285 AEAVLEAVRQWDAAGKNGTLPRFPELAASVVAPGAAVPVRHPGVLAFLRREAADKITPDL 344
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFA-------NEILGISALKFGK 177
+R A ++ D +E + L+ P+ A ++ ++A G+
Sbjct: 345 LRDLAAVR--LHHGDEPGFEALLAELEAGENPAAAGSAPADPRDVRLRQLARLAARDPGE 402
Query: 178 VQKAKTIFEELAKDNNSPFGI 198
A + EL + +
Sbjct: 403 RAVAIRLVRELLDAGQTRPAL 423
>gi|254559413|ref|YP_003066508.1| hypothetical protein METDI0838 [Methylobacterium extorquens DM4]
gi|254266691|emb|CAX22471.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 511
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 52/163 (31%), Gaps = 11/163 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A + + + D A K + L + + +L + D + AA+I
Sbjct: 231 LTAAAQRHEAGEPDTATEQALKAVKLAPDLVP--AAVIAGRLLARRNDLRKAAKIIEAAW 288
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQFANEILGISALKF 175
P L + + T + + L++ + + ++ +A +
Sbjct: 289 KATPHPE-------LAKVYLNLRTGDSARDRLARAENLAK-LSSWEPESRLVIAQAATEA 340
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
+A+ L D + +++ A A R+++
Sbjct: 341 KDFGRAREALAPLTDDRPTARVCRMMARIEAAEHGAESGRSRE 383
>gi|328541884|ref|YP_004301993.1| Thioredoxin [polymorphum gilvum SL003B-26A1]
gi|326411635|gb|ADZ68698.1| Thioredoxin [Polymorphum gilvum SL003B-26A1]
Length = 334
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 8/158 (5%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ QA L + A F +L L+ + A + GD A
Sbjct: 159 AAETEQLLEQADALLAAKDYGQAAQHFGAVLQMAPDSVRALAGL--ARCYLGTGDAARAR 216
Query: 110 EIFLKVANDDLAPLAV-RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+ V A A A ++ A E+ + ++P A L
Sbjct: 217 QALEMVPEPGHADPAYTAAVAAIELAEQAESLGDLAELQSRVA-----ADPADHQARFDL 271
Query: 169 GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
++ G A E+ + + + R Q++
Sbjct: 272 ALALNARGDKTAAVDQLIEIVRRDRAWNDDGARRQLLQ 309
>gi|121728415|ref|ZP_01681442.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae V52]
gi|147675083|ref|YP_001217161.1| putative fimbrial biogenesis and twitching motility protein [Vibrio
cholerae O395]
gi|153214678|ref|ZP_01949538.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae 1587]
gi|229515007|ref|ZP_04404467.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae TMA 21]
gi|262169630|ref|ZP_06037321.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae RC27]
gi|121629288|gb|EAX61722.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae V52]
gi|124115200|gb|EAY34020.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae 1587]
gi|146316966|gb|ABQ21505.1| putative fimbrial biogenesis and twitching motility protein [Vibrio
cholerae O395]
gi|227013521|gb|ACP09731.1| putative fimbrial biogenesis and twitching motility protein [Vibrio
cholerae O395]
gi|229347712|gb|EEO12671.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae TMA 21]
gi|262021864|gb|EEY40574.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae RC27]
Length = 237
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 59/171 (34%), Gaps = 10/171 (5%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L+I + + + + + + A L + + AR + EK L
Sbjct: 8 GLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPD 67
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y S + +A A G+ A +++ ++ + T L Y+
Sbjct: 68 YYR--SQLSMAHYYEAVGENDAARKMYRTALSEHPKNGNVLNNFGTF-----LCKQGEYD 120
Query: 145 EISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKTIFE-ELAKDNN 193
+ ++ E A+ E G+ ALK GK A+ F+ + D N
Sbjct: 121 TADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPN 171
>gi|218530480|ref|YP_002421296.1| thioredoxin domain [Methylobacterium chloromethanicum CM4]
gi|240138841|ref|YP_002963316.1| thioredoxin [Methylobacterium extorquens AM1]
gi|218522783|gb|ACK83368.1| Thioredoxin domain [Methylobacterium chloromethanicum CM4]
gi|240008813|gb|ACS40039.1| thioredoxin [Methylobacterium extorquens AM1]
Length = 302
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ + + +A + ++ L A + +L ++ + ++ + A + G+T++A +
Sbjct: 128 SEIDQVLEEAAAVASAGDLPAASELYAAVLREEPENLKAIAGL--AKTQLELGETESAKQ 185
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ D A ++AA L + + +++ + +++ N A L
Sbjct: 186 VLAMAPPDKADDPLF---AGVRAALELAEQAGTLGDLAALQKRIEADPNDFQ--ARFDLA 240
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ GK ++A +A+ + S + R Q++
Sbjct: 241 LGLNAAGKREEAVDQLVAIARADRSWNEDAARKQLLQ 277
>gi|163850175|ref|YP_001638218.1| HemY domain-containing protein [Methylobacterium extorquens PA1]
gi|163661780|gb|ABY29147.1| HemY domain protein [Methylobacterium extorquens PA1]
Length = 511
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 52/163 (31%), Gaps = 11/163 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A + + + D A K + L + + +L + D + AA+I
Sbjct: 231 LTAAAQRHEAGEPDTATEQALKAVKLAPDLVP--AAVIAGRLLARRNDLRKAAKIIEAAW 288
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQFANEILGISALKF 175
P L + + T + + L++ + + ++ +A +
Sbjct: 289 KATPHPE-------LAKVYLNLRTGDSARDRLARAENLAK-LSSWEPESRLVIAQAATEA 340
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
+A+ L D + +++ A A R+++
Sbjct: 341 KDFGRAREALAPLTDDRPTARVCRMMARIEAAEHGAESGRSRE 383
>gi|146283359|ref|YP_001173512.1| hypothetical protein PST_3029 [Pseudomonas stutzeri A1501]
gi|145571564|gb|ABP80670.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 213
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 7/166 (4%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL-ELFNSNKLDDAR-SSFEKILSQD 83
L ++ L L + + + + Q L S + D A S +L +D
Sbjct: 25 VLGAVIALVLVFGWQFWQKHQINQAQSASVVYQQLLGAALESGEADAAEVSRLGNLLKKD 84
Query: 84 NKL--YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
Y ++++A + V G AA + D A + A + A +L
Sbjct: 85 FAGTHYAQYGSLFVAKVAVESGRLDEAASELRAIV-DKPADKTLDELARQRLARVLAAQD 143
Query: 142 SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+E K+L + E+ G ++ G+ +A + +
Sbjct: 144 KADEAIKLLDG--KVDAAFVASREELRGDLLVQLGRNDEAHAAYSK 187
>gi|297813013|ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320227|gb|EFH50649.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1027
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 61 LELFNSNKLDDARSSFEKILS----QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ + K+ +A S F ++ YN + + S L + D E+ +
Sbjct: 841 MHYGKAGKMSEALSLFSEMQKKGIKPGTPSYNMVVKICATSRLHREVD-----ELLQAME 895
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ + Y + +QA + ++S + E K + + E P+ +L + K G
Sbjct: 896 RTGICTESSTYLSLIQAYA---ESSQFAEAEKTITLMQEKGIPLFHSHFSLLLSAFAKAG 952
Query: 177 KVQKAKTIFEELAKDNNSPFGISTR 201
+ +A+ I+ ++++ SP R
Sbjct: 953 MMDEAERIYSKMSEAGISPDSACKR 977
>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 632
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L+N KL++A +++ K + + SN+ A L +G + A + +
Sbjct: 170 IALYNQGKLEEAIAAYNKAIEINPNYAEVYSNLGFA--LYNQGKLEEAIAAYNTAIEINP 227
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A L + EE + NP FA LG++ GK+++
Sbjct: 228 NDA----FAYNNLGIALSNQGKLEEAIAAYNT-AIEINPNDAFAYNNLGVALYNQGKLEE 282
Query: 181 A 181
A
Sbjct: 283 A 283
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDD 119
+ L N KL++A +++ + + +N+ +A L +G + A + + +
Sbjct: 68 IALRNQGKLEEAIAAYNTAIEINPNYAEVYNNLGVA--LYYQGKLEEAIAAYNTAIEINP 125
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
L + EE K + NP + FA LGI+ GK++
Sbjct: 126 NYAEVYSNL-----GFALSNQGKLEEAIAAYNK-AIEINPNYAFAYIGLGIALYNQGKLE 179
Query: 180 KAKTIFEE 187
+A + +
Sbjct: 180 EAIAAYNK 187
>gi|219852380|ref|YP_002466812.1| TPR repeat-containing protein [Methanosphaerula palustris E1-9c]
gi|219546639|gb|ACL17089.1| TPR repeat-containing protein [Methanosphaerula palustris E1-9c]
Length = 467
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
+ H + + +L ++D A + F+ +LS D L + A L
Sbjct: 167 WYQELHTLAPDEENAWLREGYDLIRLKQVDLAVACFDHLLSSDGGNQRAL--LAKAFCLA 224
Query: 101 AKGDTKNAAEIFLKVANDDLA 121
+GD A ++ ++ D
Sbjct: 225 ERGDPDQAFLVYDQILLTDPD 245
>gi|332023052|gb|EGI63317.1| Signal recognition particle 72 kDa protein [Acromyrmex echinatior]
Length = 730
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 25/165 (15%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS--ILVAKGDTKNAAEIFLK 114
F +A++L K +A K+L + LS M +AS +L+++ + K+A I
Sbjct: 416 FIKAVQLSKEGKPKEA----AKLLIEHAIGEKELS-MKLASVQVLLSQDERKDAIAILEN 470
Query: 115 V-ANDDLAPLAVRYAATL--------QAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
+ D P V TL +A+ L + +Y K + Q AN
Sbjct: 471 LNERDRSLPGIVGALVTLHLADNDRERASIALKNAVAY--YKKNKETTENLGELWRQAAN 528
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
L+ G+++ A I +EL SP T +Q+++A +
Sbjct: 529 -----FYLRGGELKIAADILQELVD--ASPSDTKTLAQLVVAYVQ 566
>gi|124485501|ref|YP_001030117.1| extracellular ligand-binding receptor [Methanocorpusculum labreanum
Z]
gi|124363042|gb|ABN06850.1| Tetratricopeptide TPR_2 repeat protein [Methanocorpusculum
labreanum Z]
Length = 1073
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 11/130 (8%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L N K +DA + ++ +D + + A +L G A F K+
Sbjct: 869 AASLANIGKTEDALKQYAELTLKDPEN--TAALFGYAEMLSRMGKYPEAVRHFDKLIGKY 926
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISALKFGK 177
+ ++ A + +I+ + ++P NP LG + G
Sbjct: 927 PRNSLLH----IEKALASIKIGEPADITSDMTTAAQADPKNPYVLS---GLGFMQMVTGH 979
Query: 178 VQKAKTIFEE 187
+A F++
Sbjct: 980 PTEALAAFDK 989
>gi|300798394|ref|NP_001178811.1| nephrocystin-3 [Rattus norvegicus]
Length = 1325
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 65/190 (34%), Gaps = 25/190 (13%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K+ + + ++L+ + + + ++ + + L + A + +
Sbjct: 903 YWQFVGKDKSAMATEYFESLKQYENCEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 962
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEP 156
+ + EI + A D P + L + S Y++ +I +
Sbjct: 963 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFSDAEQLYKQALEISENAYGA 1016
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE--LAKDNNSPFG--------ISTRSQM 204
+P A E+ ++ K K ++A+ ++ + + + + R+
Sbjct: 1017 DHP--HAARELEALATLYHKQNKYEQAERFRKKSVIIRQQATRRKGSLYGFALLRRRALQ 1074
Query: 205 ILANIIASDQ 214
+ + D+
Sbjct: 1075 LEELTLGKDK 1084
>gi|308274171|emb|CBX30770.1| hypothetical protein N47_E42820 [uncultured Desulfobacterium sp.]
Length = 765
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 68 KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
+ +DA + K L K + +A + +A G + A F + + + P ++
Sbjct: 256 RPEDAEKQYLKCLEISPKEVPV--RLRLAELYLAWGKKEKAEAAFKETVDKN--PQDIKA 311
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ L AS +D Y+E K +K+ + NP Q + G L K +A+++F+
Sbjct: 312 LSRL--ASFYIDDKKYDEGMKETEKILK-INPKSQEGLVLKGRLYLVRNKFTEAQSLFQS 368
Query: 188 LAKDN 192
KDN
Sbjct: 369 FLKDN 373
>gi|154685108|ref|YP_001420269.1| GutR [Bacillus amyloliquefaciens FZB42]
gi|154350959|gb|ABS73038.1| GutR [Bacillus amyloliquefaciens FZB42]
Length = 825
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 12/141 (8%)
Query: 62 ELFNSNKLDDA----RSSFEKILSQDNKLYNPLSNMYIA---SILVAKGDTKNAAEIFLK 114
L N D A + + + ++ L A +L+ G+ + AA +
Sbjct: 626 ALMEVNDSDGALRQIEAGLKILEQSGAPDHDDLKVWGTALQSRLLLKIGEPEKAAAMLDG 685
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ-FANEI---LGI 170
+ D +R+ L + S YEE + + + S E LG+
Sbjct: 686 I-KDQPVSPIIRHRVLLVRGDLSFARSHYEEAITLYEAANTTSAAYGGEKTIEAYFNLGM 744
Query: 171 SALKFGKVQKAKTIFEELAKD 191
+ +K +++KA+ FE++ D
Sbjct: 745 AYVKCDQLEKAEKAFEQMLYD 765
>gi|149917256|ref|ZP_01905755.1| hypothetical protein PPSIR1_40275 [Plesiocystis pacifica SIR-1]
gi|149821863|gb|EDM81257.1| hypothetical protein PPSIR1_40275 [Plesiocystis pacifica SIR-1]
Length = 439
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 52/169 (30%), Gaps = 18/169 (10%)
Query: 48 KKKNIVGENFAQAL-----ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
G+ A AL EL + D + + ++ + A L
Sbjct: 52 SAAKKGGDAKAAALHPDDQELADRRSKDQLEHDPAAVKKTHD---EMVALLAEARKLGEA 108
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS---KILQKLSEPSNP 159
GDT+ A + + R A ++A + + K+ KL+ +
Sbjct: 109 GDTEAAVAKYEALLK---LDPHYR-PALIEAGELEAKAGDWVAAVHHTKLAAKLTADDDA 164
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEE---LAKDNNSPFGISTRSQMI 205
M + +G A K GK A + E L D I R +
Sbjct: 165 MKVTLLDRVGQYAEKEGKNNDAAHYYREALALKPDEGLRAEIQGRLDAL 213
>gi|90407868|ref|ZP_01216044.1| TPR repeat protein [Psychromonas sp. CNPT3]
gi|90311043|gb|EAS39152.1| TPR repeat protein [Psychromonas sp. CNPT3]
Length = 812
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 25/60 (41%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F QA + K A+ S K+L+ + Y + + +A++ + + A + K
Sbjct: 143 QFLQAKQWIAQKKFSLAKKSLTKLLATTSNTYRVEAKLELATLYIVTKQSSKAIALLEKA 202
>gi|328479775|gb|EGF48897.1| hypothetical protein AAULR_13492 [Lactobacillus rhamnosus MTCC
5462]
Length = 44
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 16 MGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKK 49
M K + I L++L+++ + W+ L+D H ++
Sbjct: 1 MKKWIWGSIGGLIVLIVVGIGGWW-LYDHFHYQQ 33
>gi|325106907|ref|YP_004267975.1| RNA polymerase subunit alpha domain protein [Planctomyces
brasiliensis DSM 5305]
gi|324967175|gb|ADY57953.1| RNA polymerase alpha subunit domain protein [Planctomyces
brasiliensis DSM 5305]
Length = 436
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 43/169 (25%), Gaps = 31/169 (18%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELFN--SNKLDDARSSFEKILSQDNKLYNPL 90
L + + E + A + + DDA K+ S L
Sbjct: 31 LVGGQYSEIRQHWQELSDRASSDRDHTAAGIVAFLLARHDDAIEHLGKVGSNG------L 84
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ Y A +++ A +F A D L+A I +
Sbjct: 85 ATYYQALANMSQDRYDEAVRLFDS-AKDQGYDRVQCEL--LKAGCIRL-----------A 130
Query: 151 QKLSEPSNPMHQFANEILGISALK---------FGKVQKAKTIFEELAK 190
++ E N + A E + G A FE
Sbjct: 131 GRVDEAENMLRGLAREAATRAEYSYQMGCIMADRGDTYGALEYFERAVD 179
>gi|258539866|ref|YP_003174365.1| hypothetical protein LC705_01675 [Lactobacillus rhamnosus Lc 705]
gi|257151542|emb|CAR90514.1| Putative protein without homology [Lactobacillus rhamnosus Lc
705]
Length = 92
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 16 MGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKK 49
M K + I L++L+++ + W+ L+D H ++
Sbjct: 1 MKKWIWGSIGGLIVLIVVGIGGWW-LYDHFHYQQ 33
>gi|148251920|ref|YP_001236505.1| putative thioredoxin [Bradyrhizobium sp. BTAi1]
gi|146404093|gb|ABQ32599.1| putative thioredoxin [Bradyrhizobium sp. BTAi1]
Length = 305
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 10/140 (7%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+GE +A + A + +ILS D L+ + A V G + A E
Sbjct: 133 IGEILKEAEAVLAEGDPTGAAQIYAEILSFDAANIAALAGL--AKCYVETGAIEQARETL 190
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEILGI 170
+V P A R + + A +D + + + +L +NP+ A L
Sbjct: 191 AQV------PEAKRGDSAVSAVQAAIDLAEQAQSLGPIGELEQKVAANPLDHQARFDLAT 244
Query: 171 SALKFGKVQKAKTIFEELAK 190
+ GK ++A E+ K
Sbjct: 245 ALNAAGKRKEATDQLLEIVK 264
>gi|50511239|dbj|BAD32605.1| mKIAA2000 protein [Mus musculus]
Length = 1263
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 64/191 (33%), Gaps = 27/191 (14%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K + + ++L+ + +++ ++ + + L + A + +
Sbjct: 841 YWQFVGKDKGAMATEYFESLKQYENSEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 900
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV----DTSS-YEEISKILQKLSEP 156
+ + EI + A D P + L + D Y++ +I +
Sbjct: 901 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFGDAEQLYKQALEISENAYGA 954
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE---LAKDNNSPFG--------ISTRSQ 203
+P A E+ ++ K K ++A F + + + + + R+
Sbjct: 955 DHP--HAARELEALATLYHKQNKYEQA-EHFRKKSVIIRQQATRRKGSLYGFALLRRRAL 1011
Query: 204 MILANIIASDQ 214
+ + D+
Sbjct: 1012 QLEELTLGKDK 1022
>gi|17230941|ref|NP_487489.1| hypothetical protein alr3449 [Nostoc sp. PCC 7120]
gi|17132582|dbj|BAB75148.1| alr3449 [Nostoc sp. PCC 7120]
Length = 155
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 19 CCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEK 78
+A + +L+ ++ I+F K I +F + + L+ A ++F K
Sbjct: 6 QLTDILATVAVLVSITFLIYF-------AGKTLITANSFQKGVSLYQQKDYPGAEAAFRK 58
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA-PLAVRYAATL 131
+++ ++ + +++ +L +G A E+F +V N P AT+
Sbjct: 59 VIAINSTN--DVVRLFLGDVLREQGKVAEATELFQEVINRSPKNPQGYLRLATI 110
>gi|126730404|ref|ZP_01746215.1| thioredoxin [Sagittula stellata E-37]
gi|126709137|gb|EBA08192.1| thioredoxin [Sagittula stellata E-37]
Length = 304
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 10/125 (8%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
E+ DA F +L +D M A I DT A +
Sbjct: 140 EEMLEQGAAADAVEVFAAVLEEDPVNAKAYGGMVRAHIATGDLDTAEAVL--------NG 191
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISALKFGKV 178
AP+ + A L+AA ++ + + + +L+ + P + A L + G
Sbjct: 192 APVEISKAPELEAAHAQIELAKQAAQAGPVAELTAQVEAEPDNLQARFDLAKAKYAHGDS 251
Query: 179 QKAKT 183
+ A T
Sbjct: 252 EGAVT 256
>gi|114320409|ref|YP_742092.1| hypothetical protein Mlg_1253 [Alkalilimnicola ehrlichii MLHE-1]
gi|114226803|gb|ABI56602.1| conserved hypothetical protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 209
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 40/108 (37%), Gaps = 3/108 (2%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
+++ K + I L+ + ++ + E+ +A +
Sbjct: 6 SDEEQLEAIKRWWQENGRSIIIGLI--LGAGAVGGWWTWGAWQERTAVEAANAYADFMAP 63
Query: 64 FNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAE 110
N + + A E++L + Y ++ + + ++ + +G+ AAE
Sbjct: 64 LNQGEYETAIRHGERVLDNHRRSLYATMTALQMGALHMEQGEPDRAAE 111
>gi|288959148|ref|YP_003449489.1| thioredoxin [Azospirillum sp. B510]
gi|288911456|dbj|BAI72945.1| thioredoxin [Azospirillum sp. B510]
Length = 314
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 14/144 (9%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA----AE 110
E FAQA E+ L A + +IL + + + + I GD +NA A+
Sbjct: 144 EAFAQAKEMMEGGDLQGALDLYSQILQAEPENAQAYAGIVRCLIAA--GDLENAKQMLAQ 201
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
+A D + A ++AA + + +S L + +P + L +
Sbjct: 202 APESIAKD-------KELANVRAALDVAEQASNAGPIPELME-KVAHDPNDHASRFDLAM 253
Query: 171 SALKFGKVQKAKTIFEELAKDNNS 194
+ GK + A E+ K + +
Sbjct: 254 ALFAAGKREAAVDELLEIFKRDRT 277
>gi|229523705|ref|ZP_04413110.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae bv.
albensis VL426]
gi|229337286|gb|EEO02303.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae bv.
albensis VL426]
Length = 237
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 10/171 (5%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L+I + + + + + + A L + + AR + EK L
Sbjct: 8 GLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPD 67
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y S + +A A G+ +A +++ ++ + T L Y+
Sbjct: 68 YYR--SQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTF-----LCKQGEYD 120
Query: 145 EISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKTIFE-ELAKDNN 193
+ ++ E A+ E G+ ALK GK A+ F+ + D N
Sbjct: 121 TADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPN 171
>gi|213018745|ref|ZP_03334553.1| TPR domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995696|gb|EEB56336.1| TPR domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 264
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 65/161 (40%), Gaps = 21/161 (13%)
Query: 43 DGSHEKKKNIVGENFA------QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
D + K G+NF +A + F + A S +I+++ Y+ + + +
Sbjct: 54 DKFNIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFP--YHESALIGLG 111
Query: 97 SILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
+I A + K A EI+ ++ + P ++ T+ + + + L ++ +
Sbjct: 112 NIYYANKEFKKAVEIYTRLLKEYPSNPYVLKNFLTIISQY---------DPNLALSEMLK 162
Query: 156 PSNPMHQFA--NEILGISALKFGKVQKAKTIF-EELAKDNN 193
+ + A + LG+ +K G KAK ++ D N
Sbjct: 163 LYDTLRNSAPLSANLGLIYMKKGDYIKAKEYMKAAISLDQN 203
>gi|116329905|ref|YP_799623.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 1197
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ + + K DA S +K D + L + + I A+G ++A E++ K+
Sbjct: 93 YLAGVSEYKLGKNRDALVSLKKGTDIDPENEQIL--LTLGIIYTAEGKNEDAIEVYGKL- 149
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ P+ +Y + + A IL + +E+ + L+++ N LG +A++
Sbjct: 150 --ESLPVKDKYNYSFKKAVILKNQGKFEQSYETLKRIPAEEFAFPAQLNMQLGDAAVQLK 207
Query: 177 KVQKAKTIFEE 187
K ++A+ FEE
Sbjct: 208 KYEEAEIYFEE 218
>gi|116329495|ref|YP_799215.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122239|gb|ABJ80282.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 1197
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ + + K DA S +K D + L + + I A+G ++A E++ K+
Sbjct: 93 YLAGVSEYKLGKNRDALVSLKKGTDIDPENEQIL--LTLGIIYTAEGKNEDAIEVYGKL- 149
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ P+ +Y + + A IL + +E+ + L+++ N LG +A++
Sbjct: 150 --ESLPVKDKYNYSFKKAVILKNQGKFEQSYETLKRIPAEEFAFPAQLNMQLGDAAVQLK 207
Query: 177 KVQKAKTIFEE 187
K ++A+ FEE
Sbjct: 208 KYEEAEIYFEE 218
>gi|320334271|ref|YP_004170982.1| tetratricopeptide repeat-containing protein [Deinococcus
maricopensis DSM 21211]
gi|319755560|gb|ADV67317.1| Tetratricopeptide TPR_1 repeat-containing protein [Deinococcus
maricopensis DSM 21211]
Length = 496
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L N+ DA + + + D++ + + +L+A+ D A + A D
Sbjct: 262 LARQNRTRDAVLAVQDAVKADSRNAAAQARLGE--LLLARNDRTGARTAYQNAARLDPQN 319
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ R A+L + + L + P A +LG++A + G+ +A+
Sbjct: 320 ASYR--ASLALVELNLAQYDAARRDAQLAVQAAPDQLTLARAQFVLGVAAYRQGQYAQAR 377
Query: 183 TIFE 186
+ +
Sbjct: 378 SALQ 381
>gi|153807584|ref|ZP_01960252.1| hypothetical protein BACCAC_01866 [Bacteroides caccae ATCC 43185]
gi|149129946|gb|EDM21158.1| hypothetical protein BACCAC_01866 [Bacteroides caccae ATCC 43185]
Length = 227
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 15/178 (8%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSS-------F 76
I ++ +I+ +A + + E ++ + E F + + A + F
Sbjct: 31 IIGGVVAVIIIVAGFIMYKNLYAEPREEKAQAALFKGQEYFEQDAYEQALNGDSIGFVGF 90
Query: 77 EKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKV-ANDDL-APLAVRYAATLQA 133
K+ + L+ Y G + A ++ D + AP + A A
Sbjct: 91 LKVADDFSGTKAANLAKAYAGICYAQLGKYEEAVKMLDSFNGKDQMVAPAILGAAGNCYA 150
Query: 134 ASILVDTSSYEEISKILQKLSEPSNP-MHQFANEILGISALKFGKVQKAKTIFEELAK 190
+D ++ +S + + +P A EIL +K GK A + ++
Sbjct: 151 QLGQLDKAASTLMSAADKADNNTLSPIFLMQAGEIL----VKQGKYDDAVDAYTKIKD 204
>gi|171059547|ref|YP_001791896.1| hypothetical protein Lcho_2866 [Leptothrix cholodnii SP-6]
gi|170776992|gb|ACB35131.1| conserved hypothetical protein [Leptothrix cholodnii SP-6]
Length = 224
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 9/183 (4%)
Query: 9 SYKGKCKMGKCCYKWIAPLL---ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + K ++ L+ ++++ + ++ + + G + +
Sbjct: 8 EEQEQLDQLKHFWRAYGNLITWTLVLVFGAYAAWNGWNYWQRDQASKAGGMYDEVERAVL 67
Query: 66 SNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ + D A F + + + + + A + KG A VA+ P
Sbjct: 68 AGEADRAAKVFADLKDRYPGTTFAEQAALLTAQVQFDKGQIDAAQATLAWVADKAREPE- 126
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNP-MHQFANEILGISALKFGKVQKAKT 183
A L+ A +L+D Y+E L+ P + G L GK +A
Sbjct: 127 YSAGARLRLAGLLLDAKQYDEALAR---LAGDVPPSYEALVADRRGDILLAQGKNAEAVA 183
Query: 184 IFE 186
++
Sbjct: 184 AYQ 186
>gi|89052913|ref|YP_508364.1| thioredoxin-related [Jannaschia sp. CCS1]
gi|88862462|gb|ABD53339.1| thioredoxin-related protein [Jannaschia sp. CCS1]
Length = 306
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+ DDA +F IL ++ + + + A + + + D AP A+
Sbjct: 148 GEHDDAAQTFAAILGEEPENAAAMGGLARAHLAMGQVDEAEQLL--------STAPDAIF 199
Query: 127 YAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISALKFGKVQKAKTI 184
A L+A ++ + E + L +L + +NP A L + G V++A
Sbjct: 200 NAPELEAVRAQIELARQAESAGPLAELQAAVDANPDDHAARFELAQALHANGDVEQAVDQ 259
Query: 185 FEEL 188
EL
Sbjct: 260 LLEL 263
>gi|74317457|ref|YP_315197.1| type II secretion system protein D [Thiobacillus denitrificans ATCC
25259]
gi|74056952|gb|AAZ97392.1| type II secretion system protein D [Thiobacillus denitrificans ATCC
25259]
Length = 656
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 15/102 (14%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN----------- 92
H +++ I E +A + ++ + D A + + +L + L+
Sbjct: 60 YYHTQRERIASELLVRAQQDVHAARFDAAETKLDSVLEMHPENPRALALRANLETARRHE 119
Query: 93 --MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132
+ A+ +A G AA+ ++ AP A L+
Sbjct: 120 AALQQANKALAAGKVDAAAQAAREILAQ--APGHAGALALLR 159
>gi|229015927|ref|ZP_04172891.1| Transcriptional regulator, LytR [Bacillus cereus AH1273]
gi|229022148|ref|ZP_04178699.1| Transcriptional regulator, LytR [Bacillus cereus AH1272]
gi|228739149|gb|EEL89594.1| Transcriptional regulator, LytR [Bacillus cereus AH1272]
gi|228745384|gb|EEL95422.1| Transcriptional regulator, LytR [Bacillus cereus AH1273]
Length = 338
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE 55
+ N + + KG+ K + + + PLLI+ + + F+++ + N E
Sbjct: 5 DINKETRAKKGRSKKKRLLWFILIPLLIVAMGAGGYSFHIYSKAKSVLSNAYSE 58
>gi|257125547|ref|YP_003163661.1| hypothetical protein Lebu_0762 [Leptotrichia buccalis C-1013-b]
gi|257049486|gb|ACV38670.1| hypothetical protein Lebu_0762 [Leptotrichia buccalis C-1013-b]
Length = 389
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
K E + + ++L + + +AR+ FEK + K +++ IA + + +A
Sbjct: 167 KMRPGAEAYNRGVDLIRAKRYSEARAEFEKAYNAGIKE----ADVRIALLNKQLKNNNDA 222
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTS-SYEEISKILQKLSEPSNPMHQFANEI 167
+ F K AN + A + +IL D E +++ + + M
Sbjct: 223 VKWFQKAANRGV------KEANYEIGAILYDGGKQSESRPYLVKSYNSGNKAMAMP---- 272
Query: 168 LGISALKFGKVQKAKTIFEELAKDNN 193
+ IS + + +A ++ AK+ +
Sbjct: 273 IAISYHQQNNMAEALKWYKIAAKNGD 298
>gi|170054671|ref|XP_001863235.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874922|gb|EDS38305.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 188
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 8/125 (6%)
Query: 70 DDARSSFEKILSQDNKLYNPLSNM-YIASILVAKGDTKNAAEIFL---KVANDDLAPLAV 125
++ + + +N + KGD ++A F + A D AP
Sbjct: 37 EELPEDLQDLAEPNNPRIQASKKLELEGIEWAEKGDLQSALTAFTKSIEAAPDRPAPWNN 96
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
R A + + ++ ++I + L +LS S A GI K + A+ F
Sbjct: 97 RAQAH---RYLGNEKAALDDIEQAL-RLSSSSGRTGCKALCQRGILKRKNNDTEGARQDF 152
Query: 186 EELAK 190
E+ AK
Sbjct: 153 EQAAK 157
>gi|302817024|ref|XP_002990189.1| hypothetical protein SELMODRAFT_428704 [Selaginella moellendorffii]
gi|300142044|gb|EFJ08749.1| hypothetical protein SELMODRAFT_428704 [Selaginella moellendorffii]
Length = 1794
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 144 EEISKILQKLS--EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
E L+ L+ + + H +S+L+ G + A+++F+ + +D S +
Sbjct: 11 ENSKSRLEPLAPTKEAQESHLTKLYQDALSSLQSGDLANARSLFQAIIQDPLSIKSQRGK 70
Query: 202 SQMILAN 208
S +L
Sbjct: 71 SDAMLHL 77
>gi|209527528|ref|ZP_03276030.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209492016|gb|EDZ92369.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 530
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 50/132 (37%), Gaps = 9/132 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F A +L +LD+A +S+ + ++ K N+ A L +G A + +
Sbjct: 6 FDTANQLLRKGQLDEAIASYNQAIAASPKSAWYYHNLGEA--LSQQGKIDEAIAAYRQAT 63
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ + + TL + + E + + + +P L + +K
Sbjct: 64 ELNPNSAWSYDNLGTL----LNQQGNLPEAV--RCFRQAIELDPYFWQFYHNLALVLIKQ 117
Query: 176 GKVQKAKTIFEE 187
G ++A ++ ++
Sbjct: 118 GHPEEAVSLLQK 129
>gi|254302061|ref|ZP_04969419.1| hypothetical protein FNP_2105 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322253|gb|EDK87503.1| hypothetical protein FNP_2105 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 936
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 15/135 (11%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L K D+ + + + + Y + G A F KV
Sbjct: 483 TLLEQKKYDEMQQYLSLVQDESSVNY------LKGIAAMGLGKYDEAEAEFQKVLASGDQ 536
Query: 122 PLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN--EIL---GISALKF 175
L+ + Y ++ + Y E + ++ +P + A E+L G+S +
Sbjct: 537 SLSTKVYLNRVRNYFL---AERYNEAVQAGEQYLSKLSPDKEKAIYSEMLDKIGLSYFRL 593
Query: 176 GKVQKAKTIFEELAK 190
GK +A++ + ++A
Sbjct: 594 GKYDQARSYYSKIAS 608
>gi|307729251|ref|YP_003906475.1| hypothetical protein BC1003_1206 [Burkholderia sp. CCGE1003]
gi|307583786|gb|ADN57184.1| Protein of unknown function DUF2133 [Burkholderia sp. CCGE1003]
Length = 209
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 7/183 (3%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDD-ARSSFEKI 79
+ ++L+ L A + ++ ++ + Q + S AR + +
Sbjct: 20 WGNATTWIVLVALVAAAGWNGWNFWQRRQAAEAAVLYDQVQQAVASGDKAKIARVAADME 79
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
Y ++ + A L A GD + A+ L+ D + A L+ AS+L+D
Sbjct: 80 DKFSRTAYAQMTALAAAKALYAAGD-EGGAKAQLQWTIDHAKDDEFKQVAKLRLASLLLD 138
Query: 140 TSSYEEISKILQKLSEPSN-PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+Y+ + L L+EP + P G GK A+ + +LA D
Sbjct: 139 EKAYD---QGLALLAEPQSEPFKGIVANGRGDLLAAQGKRDDARAAY-KLALDALPKNDT 194
Query: 199 STR 201
STR
Sbjct: 195 STR 197
>gi|218779482|ref|YP_002430800.1| hypothetical protein Dalk_1634 [Desulfatibacillum alkenivorans
AK-01]
gi|218760866|gb|ACL03332.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 469
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 58/173 (33%), Gaps = 37/173 (21%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL 86
L+++++L+ ++ G +K + + S K + + EK +
Sbjct: 8 LIVIIVLTALAGLAIWSGLPAQKAS-----------IRESGKGAETAAQHEKEAADG--- 53
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVAN---DDLAPLAVRYAATLQAASILVDTSS- 142
S+ G + + + + D P L+ +L+ +
Sbjct: 54 ----------SLEALAGRLELSPAVLDVIIRSIRDHGIPP-------LRVHQLLLQKKTE 96
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
+ ++ LQ E A E+ +ALK G A+++ + + +
Sbjct: 97 FNDLLSQLQPSKEGGESFTPNAREV--AAALKAGDFDNARSLLQNALSELEAG 147
>gi|159131889|ref|NP_082997.3| nephrocystin-3 isoform a [Mus musculus]
Length = 1325
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 64/191 (33%), Gaps = 27/191 (14%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K + + ++L+ + +++ ++ + + L + A + +
Sbjct: 903 YWQFVGKDKGAMATEYFESLKQYENSEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 962
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV----DTSS-YEEISKILQKLSEP 156
+ + EI + A D P + L + D Y++ +I +
Sbjct: 963 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFGDAEQLYKQALEISENAYGA 1016
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE---LAKDNNSPFG--------ISTRSQ 203
+P A E+ ++ K K ++A F + + + + + R+
Sbjct: 1017 DHP--HAARELEALATLYHKQNKYEQA-EHFRKKSVIIRQQATRRKGSLYGFALLRRRAL 1073
Query: 204 MILANIIASDQ 214
+ + D+
Sbjct: 1074 QLEELTLGKDK 1084
>gi|115961768|ref|XP_001191373.1| PREDICTED: similar to MGC83808 protein, partial [Strongylocentrotus
purpuratus]
Length = 1475
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
+E +G+ + +L + +DA + + + + + + + + + G+
Sbjct: 526 NEAAAQALGDAY----DLLDE--KEDAIAVYTAVTKRAALGGAKWAWLRLGLVQLRAGNA 579
Query: 106 KNAAEIFLKVANDDLAPLA 124
A E F V D +
Sbjct: 580 TEAVECFQAVLRADPDDMI 598
>gi|293349442|ref|XP_002727142.1| PREDICTED: nephrocystin 3-like [Rattus norvegicus]
Length = 1331
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 65/190 (34%), Gaps = 25/190 (13%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K+ + + ++L+ + + + ++ + + L + A + +
Sbjct: 909 YWQFVGKDKSAMATEYFESLKQYENCEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 968
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEP 156
+ + EI + A D P + L + S Y++ +I +
Sbjct: 969 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFSDAEQLYKQALEISENAYGA 1022
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE--LAKDNNSPFG--------ISTRSQM 204
+P A E+ ++ K K ++A+ ++ + + + + R+
Sbjct: 1023 DHP--HAARELEALATLYHKQNKYEQAERFRKKSVIIRQQATRRKGSLYGFALLRRRALQ 1080
Query: 205 ILANIIASDQ 214
+ + D+
Sbjct: 1081 LEELTLGKDK 1090
>gi|254503211|ref|ZP_05115362.1| hypothetical protein SADFL11_3250 [Labrenzia alexandrii DFL-11]
gi|222439282|gb|EEE45961.1| hypothetical protein SADFL11_3250 [Labrenzia alexandrii DFL-11]
Length = 442
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 22/50 (44%)
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
LG+ + G + A+ F+ + + P + R + L+ I + Q +
Sbjct: 87 LGVLYYRLGSFETARYYFQSTLETPDVPEEVQQRVETYLSAIASKQQPTQ 136
>gi|325068339|ref|ZP_08127012.1| Putative CDP-glycerol:glycerophosphate [Actinomyces oris K20]
Length = 1320
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 9/87 (10%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN- 117
A + L +A+ +EK+ + + S + + I + + A + +VA+
Sbjct: 21 AAAREYEDGNLAEAKRLYEKLSESGH---DTASRLRLGVIAERQERFEAALRTYTEVADR 77
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYE 144
D A +A +L E
Sbjct: 78 DPSCGEAF-----YRAGCLLKRQDDPE 99
>gi|289548588|ref|YP_003473576.1| hypothetical protein Thal_0816 [Thermocrinis albus DSM 14484]
gi|289182205|gb|ADC89449.1| TPR repeat-containing protein [Thermocrinis albus DSM 14484]
Length = 132
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
LD A ++K L +D K + L+ + ++ KGD A + + + P +
Sbjct: 33 QGSLDLAEKEYKKALKKDPKNF--LALFNLGNVYAKKGDYTVAEKFYREALAVKEDPDVL 90
Query: 126 RYAATLQAASILVDTSSYEE---ISKILQKLSEPSNPMHQFANEILG 169
A +L EE K ++ S Q EI G
Sbjct: 91 NNLA-----YVLYKQGRREEALIFIKRALQMKN-SETYRQTLREIEG 131
>gi|15641620|ref|NP_231252.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121590802|ref|ZP_01678130.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae 2740-80]
gi|153802231|ref|ZP_01956817.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae MZO-3]
gi|153818119|ref|ZP_01970786.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae NCTC 8457]
gi|153822199|ref|ZP_01974866.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae B33]
gi|153824846|ref|ZP_01977513.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae MZO-2]
gi|227081765|ref|YP_002810316.1| putative fimbrial biogenesis and twitching motility protein [Vibrio
cholerae M66-2]
gi|229508443|ref|ZP_04397946.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae BX
330286]
gi|229511485|ref|ZP_04400964.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae B33]
gi|229518625|ref|ZP_04408068.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae RC9]
gi|229520635|ref|ZP_04410059.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae TM
11079-80]
gi|229607850|ref|YP_002878498.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae MJ-1236]
gi|254286335|ref|ZP_04961293.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae AM-19226]
gi|254848731|ref|ZP_05238081.1| fimbrial biogenesis and twitching motility protein [Vibrio cholerae
MO10]
gi|255744956|ref|ZP_05418906.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholera CIRS 101]
gi|262161757|ref|ZP_06030775.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae INDRE
91/1]
gi|298498305|ref|ZP_07008112.1| type IV pilus biogenesis/stability protein PilW [Vibrio cholerae
MAK 757]
gi|9656124|gb|AAF94766.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547365|gb|EAX57481.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae 2740-80]
gi|124122213|gb|EAY40956.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae MZO-3]
gi|126511305|gb|EAZ73899.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae NCTC 8457]
gi|126520267|gb|EAZ77490.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae B33]
gi|149741564|gb|EDM55594.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae MZO-2]
gi|150423502|gb|EDN15445.1| fimbrial biogenesis and twitching motility protein, putative
[Vibrio cholerae AM-19226]
gi|227009653|gb|ACP05865.1| putative fimbrial biogenesis and twitching motility protein [Vibrio
cholerae M66-2]
gi|229342459|gb|EEO07453.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae TM
11079-80]
gi|229343314|gb|EEO08289.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae RC9]
gi|229351450|gb|EEO16391.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae B33]
gi|229354397|gb|EEO19320.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae BX
330286]
gi|229370505|gb|ACQ60928.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae MJ-1236]
gi|254844436|gb|EET22850.1| fimbrial biogenesis and twitching motility protein [Vibrio cholerae
MO10]
gi|255737427|gb|EET92822.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholera CIRS 101]
gi|262028489|gb|EEY47144.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae INDRE
91/1]
gi|297542638|gb|EFH78688.1| type IV pilus biogenesis/stability protein PilW [Vibrio cholerae
MAK 757]
Length = 237
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 10/171 (5%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L+I + + + + + + A L + + AR + EK L
Sbjct: 8 GLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPD 67
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y S + +A A G+ +A +++ ++ + T L Y+
Sbjct: 68 YYR--SQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTF-----LCKQGEYD 120
Query: 145 EISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKTIFE-ELAKDNN 193
+ ++ E A+ E G+ ALK GK A+ F+ + D N
Sbjct: 121 TADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPN 171
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 7/92 (7%)
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL--VDTSSYEEISKILQKLSEPSN 158
G + ++ ++ P ++ + ATL A + +D E+ + + +
Sbjct: 183 QNGLAERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLG--REVERRVVSERMDIS 240
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAK 190
A L + G V KA+ F+ L +
Sbjct: 241 VFLGSA---LVNMYARCGVVDKARRWFDALQE 269
>gi|312963307|ref|ZP_07777790.1| thioredoxin [Pseudomonas fluorescens WH6]
gi|311282387|gb|EFQ60985.1| thioredoxin [Pseudomonas fluorescens WH6]
Length = 290
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 2/126 (1%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ QA LF ++ +A + +L +DN L + A L +G+ A
Sbjct: 117 APKAADPLEQAQALFADGRISEAEAVLVALLGEDNTNAAAL--ILYARCLAERGELGEAQ 174
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ V +D A L D ++ L + + +Q + + L
Sbjct: 175 TVLDAVKSDAHKAALAGAKAQLTFLRQAADLPDAADLKSRLAQNPQDDEAAYQLSIQQLA 234
Query: 170 ISALKF 175
Sbjct: 235 RQQYDA 240
>gi|302821673|ref|XP_002992498.1| hypothetical protein SELMODRAFT_430665 [Selaginella moellendorffii]
gi|300139700|gb|EFJ06436.1| hypothetical protein SELMODRAFT_430665 [Selaginella moellendorffii]
Length = 1794
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 144 EEISKILQKLS--EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
E L+ L+ + + H +S+L+ G + A+++F+ + +D S +
Sbjct: 11 ENSKSRLEPLAPTKEAQESHLTKLYQDALSSLQSGDLANARSLFQAIIQDPLSIKSQRGK 70
Query: 202 SQMILAN 208
S +L
Sbjct: 71 SDAMLHL 77
>gi|239905482|ref|YP_002952221.1| hypothetical protein DMR_08440 [Desulfovibrio magneticus RS-1]
gi|239795346|dbj|BAH74335.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 1619
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 8/127 (6%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
L+ + +L +A + L D L + +Y+A + +G T A + +
Sbjct: 598 EAGKALWRAGRLAEASTMLTAALGADPSLNP--ARLYLALVKKRQGQTAEAQALLSQALA 655
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
A R A + A + D + L+ + M +L +
Sbjct: 656 --GASPFDRDYALGEFAYLDGDKVQALTHFQRCLALAPADDAMRLRVISLLA----GENR 709
Query: 178 VQKAKTI 184
+A+
Sbjct: 710 FTEARQY 716
>gi|254449664|ref|ZP_05063101.1| thioredoxin [Octadecabacter antarcticus 238]
gi|198264070|gb|EDY88340.1| thioredoxin [Octadecabacter antarcticus 238]
Length = 303
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 16/136 (11%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDN---KLYNPLSNMYIASILVAKGDTKNAAEI 111
+ A + + DA +F IL +D + L+ ++A +G A +
Sbjct: 133 DALEAAETMLADGEFADAAETFAAILEEDPNHAGAFGGLARCHLA-----QGQVDEAEAV 187
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILG 169
+ AP + AA ++AA ++ + + + +L + ++ + A L
Sbjct: 188 L------NGAPAEISDAAPIEAARAAIELARQAANAGPVAELQAAVDADENNHQARLDLA 241
Query: 170 ISALKFGKVQKAKTIF 185
++ G + A
Sbjct: 242 VALHASGDSEGAVDQL 257
>gi|68565898|sp|Q7TNH6|NPHP3_MOUSE RecName: Full=Nephrocystin-3
gi|32482575|gb|AAP84621.1| nephrocystin 3 [Mus musculus]
Length = 1324
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 64/191 (33%), Gaps = 27/191 (14%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K + + ++L+ + +++ ++ + + L + A + +
Sbjct: 902 YWQFVGKDKGAMATEYFESLKQYENSEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 961
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV----DTSS-YEEISKILQKLSEP 156
+ + EI + A D P + L + D Y++ +I +
Sbjct: 962 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFGDAEQLYKQALEISENAYGA 1015
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE---LAKDNNSPFG--------ISTRSQ 203
+P A E+ ++ K K ++A F + + + + + R+
Sbjct: 1016 DHP--HAARELEALATLYHKQNKYEQA-EHFRKKSVIIRQQATRRKGSLYGFALLRRRAL 1072
Query: 204 MILANIIASDQ 214
+ + D+
Sbjct: 1073 QLEELTLGKDK 1083
>gi|317476438|ref|ZP_07935687.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
gi|316907464|gb|EFV29169.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
Length = 1010
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G A + F D+ P A R A T Y ++ +L +++ + + Q
Sbjct: 268 GKYHEAVKAFGHYLKDNAEPAARRD-ALYMLGMSYYRTGVYSQVPVVLGEVTTGKDELTQ 326
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNN 193
A +G++ L+ KA+ FE+ A N
Sbjct: 327 NAYLHMGLAYLQLADKNKARMAFEQAAASNA 357
>gi|157374573|ref|YP_001473173.1| tetratricopeptide TPR_4 [Shewanella sediminis HAW-EB3]
gi|157316947|gb|ABV36045.1| tetratricopeptide TPR_4 [Shewanella sediminis HAW-EB3]
Length = 206
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 4/161 (2%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
+ + K E F QA+ ++ ++ K Y L ++ +A
Sbjct: 37 FGWNYYSEYKVAKAESASEAF-QAMSGSATSDAAMLSAAENFAKDHSQKGYQSLLSLIVA 95
Query: 97 SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
V GD A V ++ AT++ A + + L+++S+P
Sbjct: 96 KAAVESGDLDKAEAALKSVIG-SAPDASLVMVATMRLARVQAEQGQVATAITTLEQVSDP 154
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
E+ G ++ G+ + AK ++ + +
Sbjct: 155 --AFIAQKEELKGDFLVRKGEAELAKAAYQAAVDNGGATSS 193
>gi|269103273|ref|ZP_06155970.1| putative membrane protein [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163171|gb|EEZ41667.1| putative membrane protein [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 144
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 3/133 (2%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ + S K D + I + + Y+ L+ + +A + D AAE VA +
Sbjct: 1 MAMLESGKSDAIADTQAFIQAHKDSHYSVLAALQLAKAQIEAKDLNGAAEQLKWVAA-NS 59
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
A+ A + A + + Y+E L+ + +E+ G LK G
Sbjct: 60 TDQAILPLAKTRLARVYLQQDKYDEALAELK--TVKMASWKAKVDELRGDVLLKKGDTDA 117
Query: 181 AKTIFEELAKDNN 193
A+ + E +
Sbjct: 118 ARDAYIEAQEAGA 130
>gi|56751463|ref|YP_172164.1| hypothetical protein syc1454_c [Synechococcus elongatus PCC 6301]
gi|56686422|dbj|BAD79644.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 451
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 41/117 (35%), Gaps = 5/117 (4%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L + + ++A ++++ +L ++ A++L +G A + + +
Sbjct: 44 LAAAGQPEEAIAAYQAVLEFQPGCPQSIAAW--AAVLNEQGQFAEAIALLDQASEQTADL 101
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
R A LQ+ + + + L + S + LG+ G +
Sbjct: 102 WHQRAVA-LQSLGDWPQALTSCDSALQLDPTAAESQFLRSKLR--LGLGDWSQGSPE 155
>gi|121997734|ref|YP_001002521.1| thioredoxin domain-containing protein [Halorhodospira halophila
SL1]
gi|121589139|gb|ABM61719.1| Thioredoxin domain [Halorhodospira halophila SL1]
Length = 286
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 3/110 (2%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ + QA EL + + +A Q ++ A L+ GD A
Sbjct: 114 APEADPYEQARELMSEGRSAEAVPYLRAAREQRPDDAGVTIDLARA--LLQSGDADEAFT 171
Query: 111 IFLKVA-NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP 159
+ ++ ND P A A + A + D E + + ++ +
Sbjct: 172 LIEGLSTNDQQDPRAQGILARKEFAERVRDLPPLETLEQRVEADAGDGQA 221
>gi|326773776|ref|ZP_08233059.1| teichoic acid synthase [Actinomyces viscosus C505]
gi|326637006|gb|EGE37909.1| teichoic acid synthase [Actinomyces viscosus C505]
Length = 1329
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 9/87 (10%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN- 117
A + L +A+ +EK+ + + S + + I + + A + +VA+
Sbjct: 30 AAAREYEDGNLAEAKRLYEKLSESGH---DTASRLRLGVIAERQERFEAALRTYTEVADR 86
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYE 144
D A +A +L E
Sbjct: 87 DPSCGEAF-----YRAGCLLKRQDDPE 108
>gi|320354280|ref|YP_004195619.1| tol-pal system protein YbgF [Desulfobulbus propionicus DSM 2032]
gi|320122782|gb|ADW18328.1| tol-pal system protein YbgF [Desulfobulbus propionicus DSM 2032]
Length = 377
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 17/124 (13%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV-AKGDT 105
+ + + F+Q + + +A SFE+ LS + ++Y + +G+
Sbjct: 251 SQAASSSSDPFSQGMNQYKGKNYKEAYKSFEQSLSTNPNGSQAAKSLYYMGESLYNQGEY 310
Query: 106 KNAAEIFLKV----ANDDLAPLAV------------RYAATLQAASILVDTSSYEEISKI 149
A + KV D LAP A+ A + ++ D E S+
Sbjct: 311 DLAILDYQKVISNHGKDALAPAALLKQGMSFEKLTDHETAKIIYKKLISDHGGSAEASQA 370
Query: 150 LQKL 153
++L
Sbjct: 371 KERL 374
>gi|317050352|ref|YP_004111468.1| peptidase M48 Ste24p [Desulfurispirillum indicum S5]
gi|316945436|gb|ADU64912.1| peptidase M48 Ste24p [Desulfurispirillum indicum S5]
Length = 440
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 50/137 (36%), Gaps = 11/137 (8%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E + AL S + D ++ + + + A +GD + A + + K
Sbjct: 252 ERYETALRQARSGRYDASKPLHRERYMDNTASLRAI---RGAIEATQRGDAEMAGKRYDK 308
Query: 115 VAN--DDLAPLAVRYAAT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+A R AT + + + + + + P+ P A+ +LG
Sbjct: 309 AQEHYATALKIAPRDYATHLMMAKCLLAQEKPAEAAVYARNGRDLSPAEP---QAHHVLG 365
Query: 170 ISALKFGKVQKAKTIFE 186
++L+ G+ +++ F
Sbjct: 366 FASLQQGQFEQSLQAFS 382
>gi|325522202|gb|EGD00845.1| TPR repeat-containing protein [Burkholderia sp. TJI49]
Length = 383
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 150 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDDLPVSDPRDAAVIAR-TDASI 208
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + D +RY + A T Y + K L++L ++P
Sbjct: 209 LFTAKRYPEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYATMEKQLRELIRTQP 264
Query: 157 SNPMHQFANEILGIS-ALKFGKVQKAKTIFEE 187
NP A LG S A + ++ +A + E+
Sbjct: 265 DNP---QAYNALGYSLADRNQRLPEASKLIEK 293
>gi|152980898|ref|YP_001353082.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille]
gi|151280975|gb|ABR89385.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille]
Length = 261
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 5/141 (3%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN-KL 86
++ + L+ D E K + +++A E N A S FEK+ S+
Sbjct: 6 IVALAFLLSACSLTPDKFDETKNWSPSKLYSEAREEMNVGDYAKAVSHFEKLESRYPFGT 65
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
Y + M IA +GD A + V Y L+ D S +
Sbjct: 66 YAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINFNDKVSIFDF 125
Query: 147 SKILQKLSEPSNPMHQFANEI 167
A E
Sbjct: 126 VSRQDPTERDPKA----AREA 142
>gi|157803448|ref|YP_001491997.1| hypothetical protein A1E_01335 [Rickettsia canadensis str. McKiel]
gi|157784711|gb|ABV73212.1| hypothetical protein A1E_01335 [Rickettsia canadensis str. McKiel]
Length = 220
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 65/170 (38%), Gaps = 8/170 (4%)
Query: 48 KKKNIVGENFAQA--LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
K G+ + LE+ NK + A ++ E +++ N ++ + +I +++
Sbjct: 51 KNNQKNGDILVKTVGLEIIKDNK-ELAFNTLENLVTNSNTRIKEIAALEQVAIKISEKKY 109
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE-----EISKILQKLSEPSNPM 160
++ K+ + A + ++ +D + + +++K L + P
Sbjct: 110 SEVKDLLNKIIANKEYSEISTSYARIAWCALAIDDQNLDIQDKAKLTKYLNYFDDEKKPF 169
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
A + + +K + + + L NN + +++ +L N+
Sbjct: 170 WATATIMKAMWDIKNNMTLQVEKNLKNLLISNNVSDLLKDQAKALLVNLN 219
>gi|309779378|ref|ZP_07674140.1| hemin-binding outer membrane transmembrane protein [Ralstonia sp.
5_7_47FAA]
gi|308921936|gb|EFP67571.1| hemin-binding outer membrane transmembrane protein [Ralstonia sp.
5_7_47FAA]
Length = 823
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYI------ASILVAKGDTKNAAEIFLKVANDDLAP 122
+D A + E +L + + L ++G K+A + + ++ P
Sbjct: 275 IDQAVAEIEALLKKVPDT-PENAEFRQEIVADEVVALSSRGRMKDAVKRYEAMSQTGKVP 333
Query: 123 LAVRYAATLQAASILVDTSS-YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R AA A +DT + K + P E L + L G+ ++A
Sbjct: 334 AYTRVAAG--DAYAYLDTPDKAADAYARALKDASPGEIETGDVQEGLFYAMLDTGRFEEA 391
Query: 182 KTIFEELAKDNNSPFGIS 199
+ + +++ DN P +
Sbjct: 392 RALLDKMKADN--PEYVR 407
>gi|218131427|ref|ZP_03460231.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697]
gi|217986359|gb|EEC52696.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697]
Length = 1010
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G A + F D+ P A R A T Y ++ +L +++ + + Q
Sbjct: 268 GKYHEAVKAFGHYLKDNAEPAARRD-ALYMLGMSYYRTGVYSQVPVVLGEVTTGKDELTQ 326
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNN 193
A +G++ L+ KA+ FE+ A N
Sbjct: 327 NAYLHMGLAYLQLADKNKARMAFEQAAASNA 357
>gi|119490033|ref|ZP_01622657.1| heterocyst differentiation protein [Lyngbya sp. PCC 8106]
gi|119454185|gb|EAW35337.1| heterocyst differentiation protein [Lyngbya sp. PCC 8106]
Length = 817
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 90 LSNMYIASILVAKGDTKNAAEIFLKVA-NDDLAPLAVRYAATLQAASILVDTSSY--EEI 146
L+ + + L+ +G A V+ D P L +I ++ Y +++
Sbjct: 617 LAGVEATTELLNRGAITEAKAALAAVSVRDGDKPEINFLWGRLMWQAINQGSADYMMDDV 676
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT-IFEELAKDNNSP 195
+ ++ + P + LG + GK+ +A + L D P
Sbjct: 677 RRYWER-AVQQRPDYLEYRNALGFAYYSEGKLDQAYQTWLQVL--DLEEP 723
>gi|81298856|ref|YP_399064.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
gi|81167737|gb|ABB56077.1| TPR repeat [Synechococcus elongatus PCC 7942]
Length = 451
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 5/114 (4%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L + + ++A ++++ +L ++ A++L +G A + + +
Sbjct: 44 LAAAGQPEEAIAAYQAVLEFQPGCPQSIAAW--AAVLNEQGQFAEAIALLDQASEQTADL 101
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
R A LQ+ + + + L + S + LG+ G
Sbjct: 102 WHQRAVA-LQSLGDWPQALTSCDSALQLDPTAAESQFLRSKLR--LGLGDWSQG 152
>gi|269215358|ref|ZP_06159212.1| putative tetratricopeptide repeat protein [Slackia exigua ATCC
700122]
gi|269131214|gb|EEZ62288.1| putative tetratricopeptide repeat protein [Slackia exigua ATCC
700122]
Length = 534
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 4/130 (3%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
K DDA ++FE S +++ + + L+ G A F + A D P
Sbjct: 89 AALRKYDDAVAAFEIATSDAKYSSRYKAHLGMGNALLKMGKNAEAGASFREAALDPSNPD 148
Query: 124 AVRYAATLQAASILVD--TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ L + +D + + LQ +P +AN LG + + ++QKA
Sbjct: 149 PTKALLNLGVCFMALDRPADAVQSYESALQFDMDPDTRNKMYAN--LGQAYVACNQMQKA 206
Query: 182 KTIFEELAKD 191
FE D
Sbjct: 207 MNAFEAALAD 216
>gi|153830646|ref|ZP_01983313.1| putative fimbrial biogenesis and twitching motility protein [Vibrio
cholerae 623-39]
gi|229529355|ref|ZP_04418745.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae
12129(1)]
gi|148873887|gb|EDL72022.1| putative fimbrial biogenesis and twitching motility protein [Vibrio
cholerae 623-39]
gi|229333129|gb|EEN98615.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae
12129(1)]
Length = 237
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 10/171 (5%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L+I + + + + + + A L + + AR + EK L
Sbjct: 8 GLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPD 67
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y S + +A A G+ +A +++ ++ + T L Y+
Sbjct: 68 YYR--SQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTF-----LCKQGEYD 120
Query: 145 EISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKTIFE-ELAKDNN 193
+ ++ E A+ E G+ ALK GK A+ F+ + D N
Sbjct: 121 TADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPN 171
>gi|90579367|ref|ZP_01235177.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Vibrio angustum S14]
gi|90440200|gb|EAS65381.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Vibrio angustum S14]
Length = 252
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 6/185 (3%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+ L L+ A + +G K L + + AR + E L
Sbjct: 4 WSVYPLLSCLLFTGCATVDVVDNGKEFDAKAASEARLNLGLNYLKDGQWERARENLEIAL 63
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
D Y + + +A G+ A +++ KV + +
Sbjct: 64 RYDPDYYR--AQISMAYYYQKVGEKDAADKMYRKVLKHSPKNG---DVLNNYGVFLCSEG 118
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE-ELAKDNNSPFGIS 199
E I+ ++ + +P + + E G+ + K G ++ A FE L+ D P +
Sbjct: 119 RYDEAIAAFVKAIEQPYYYLISASYENAGLCSRKQGNLEAATGYFENALSHDPYRPRSML 178
Query: 200 TRSQM 204
+Q+
Sbjct: 179 QLAQV 183
>gi|301167790|emb|CBW27374.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 257
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 27/59 (45%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+A L + NK D + + +++ + + + I +L +G+ A ++F ++
Sbjct: 155 LERARALSSQNKFDQSLTILKELEKSNVRQIKVRAKFEIGELLFIQGEFDLAMQVFEEI 213
>gi|284049906|ref|ZP_06380116.1| peptidase S1 and S6 chymotrypsin/Hap [Arthrospira platensis str.
Paraca]
Length = 1010
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 10/132 (7%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A EL K++ A ++ ++ + Y S +A +L +G A + + D
Sbjct: 252 ATELKAERKIEQAIEAYCNAIALNP-GYPN-SYYELAKLLQQQGKLDEAIANYQE--ATD 307
Query: 120 LAPLA---VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
LAP + R A +A+ D + + ++ P A+ +L S
Sbjct: 308 LAPRSSLFHRGLAQALSANQNFDEAIASYRTSLVLSSEIPEETYKDLASTLLRRS---ES 364
Query: 177 KVQKAKTIFEEL 188
V +A ++ ++
Sbjct: 365 DVSEAVDLYVKI 376
>gi|224370792|ref|YP_002604956.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2]
gi|223693509|gb|ACN16792.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2]
Length = 850
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 15/160 (9%)
Query: 68 KLDDARSSFEKILSQDNKLYNPLSNM--YIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
K A F I+ + Y L+ + ++ I AKG A F +V D +V
Sbjct: 321 KNPAAAEGFFAIIRDHYRDYPGLAQVLYHLGLIYDAKGYNDQALAYFKEVFEDLPENSSV 380
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL---GISALKFGKVQKAK 182
A + L Y + KIL +L + + + E+L G S+ + GK A+
Sbjct: 381 VD-AGIGIGKALFKKRFYLDSLKILTELIKSNPEKTYDSPELLLSIGRSSFELGKTANAR 439
Query: 183 TIFEELAKD-NNSPFGISTRSQMILANII---ASDQRNKK 218
F + + P MILA+I A D+ NK+
Sbjct: 440 ENFMRVLNLFPDIPGK-----DMILADIAETYAVDKDNKR 474
>gi|115374620|ref|ZP_01461899.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
gi|310819960|ref|YP_003952318.1| hypothetical protein STAUR_2688 [Stigmatella aurantiaca DW4/3-1]
gi|115368386|gb|EAU67342.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
gi|309393032|gb|ADO70491.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 785
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 5/139 (3%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
+L +++ AR++FE ++ + S Y+ + V G+ +A E F +
Sbjct: 198 DLPAPERINRARAAFEPLVHASRDVIPRQSAYYLGVLSVQAGELMDAIERFRALTALPPR 257
Query: 122 PLA---VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
+R A L +L ++ +E Q++ S E + + +K G+
Sbjct: 258 GTEEFRIRELANLSMGRLLYESGHLDEALDRYQEIPRDSEFFVDTLYE-IAWTQVKRGRF 316
Query: 179 QKAKTIFEELAK-DNNSPF 196
+AK + + + D S
Sbjct: 317 DQAKNAIDLMLEVDPESTR 335
>gi|149280280|ref|ZP_01886402.1| TPR domain protein [Pedobacter sp. BAL39]
gi|149228969|gb|EDM34366.1| TPR domain protein [Pedobacter sp. BAL39]
Length = 223
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG------ENFAQALELFNSN-KLDDARS 74
K + + + ++ + I+F+ + + + E F A L N D
Sbjct: 24 KSLLFIGVAIVALIGIYFWYQNVYLKNRALEASAKMYRAEQFLTADSLANKAINGDGGYP 83
Query: 75 SFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEI---FLKVANDDLAPLAV 125
EKI + DN L+N+Y+ I + KGD + A + + + + PLA+
Sbjct: 84 GLEKIAEEYDNTKSANLANLYLGGIYLRKGDYRKAVDALGKYSETGSPVADPLAL 138
>gi|118581067|ref|YP_902317.1| hypothetical protein Ppro_2656 [Pelobacter propionicus DSM 2379]
gi|118503777|gb|ABL00260.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 568
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 9/155 (5%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
F S E + A A + +L +D + +L+
Sbjct: 199 YFKKSIELRPEFSQAAIDMAASYEALGDYTKAIEIYHDLLDEDES--RTAVQQRLIQLLI 256
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ-AASILVDTSSYEEISKILQKLSEPSNP 159
+ + A E + A + A T++ I ++ Y+E + L +P
Sbjct: 257 QQRRFQEALEYLNQ-----SAGSGLSSAETMRKIGLIHLELEQYDEAIAVFNDLL-EKDP 310
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
LG++ + G + +AK F ++ D++
Sbjct: 311 SAHHVRLYLGVAYEEKGDLDRAKAEFLKIPSDSSV 345
>gi|332716092|ref|YP_004443558.1| cellulose biosynthesis protein [Agrobacterium sp. H13-3]
gi|325062777|gb|ADY66467.1| cellulose biosynthesis protein [Agrobacterium sp. H13-3]
Length = 548
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 6/126 (4%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G F A F+ + +A +F +L L M I +A+ A+E F
Sbjct: 397 GAQFGLANLTFDRGEFREAEIAFLGLLGSGQD--PVLLWMRIGEARLAQQQYHEASEAFR 454
Query: 114 KVANDDLAPLAVRYAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFANEI-LGIS 171
+V + AP A I + T EI LQ ++A + ++
Sbjct: 455 QV--TNRAPFQREALYKCAVALIAAERTMEGAEILDRLQHYHSDDATHLEYAEKARAALA 512
Query: 172 ALKFGK 177
L+ GK
Sbjct: 513 RLELGK 518
>gi|313667716|ref|YP_004048000.1| outer membrane protein OmpU [Neisseria lactamica ST-640]
gi|313005178|emb|CBN86611.1| putative outer membrane protein OmpU [Neisseria lactamica 020-06]
Length = 488
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFEDR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|291301605|ref|YP_003512883.1| SARP family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290570825|gb|ADD43790.1| transcriptional regulator, SARP family [Stackebrandtia nassauensis
DSM 44728]
Length = 983
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 4/124 (3%)
Query: 63 LFNSNKLDDARSSFEKILSQD---NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
L + ++D+A IL + + M+ A I A+G + A + F
Sbjct: 800 LCETGRVDEAEGLLRPILDSEVELDPGSWTQVIMFRADIRHARGQYREAIQDFEHALELT 859
Query: 120 LAPLAVRY-AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
++ A I D Y+ K L+ + + A +L ++ GK
Sbjct: 860 ADNSRIQSRLIRTSIADIYCDLEDYDNALKQLELIDLDAASTKLRAIGMLQLARAHNGKK 919
Query: 179 QKAK 182
A+
Sbjct: 920 DHAR 923
>gi|260221170|emb|CBA29467.1| hypothetical protein Csp_A12290 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 152
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
++++ +L + KL +A + ++ L + +P I G T A F +
Sbjct: 29 DDYSDVAQLVRNGKLPEAMTKVDQFLVAKPR--DPQMRFLKGVIQRDSGKTSEAIATFTR 86
Query: 115 VAND-DLAPLAVRYAATLQAA 134
+ D P A L A
Sbjct: 87 LTEDYPELPEPYNNLAVLTRA 107
>gi|301059207|ref|ZP_07200145.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300446697|gb|EFK10524.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 578
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ A + + L ++ L L A++ K AA + ++ + +
Sbjct: 196 LETGNYKAAEKALNEALKRNQTLEPAL--FDKATLYQITERDKEAAGAYERLLSLYPDNI 253
Query: 124 AVRYAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
R L + +D ++++K S+P P QF LG+ L+ G++ ++
Sbjct: 254 PARE--RLVEVYLNLDQKKDAAHQVELIKKHSKPGEPERQF----LGLIYLRQGRIDESI 307
Query: 183 TIFEELAK 190
E + +
Sbjct: 308 AELELIVR 315
>gi|156089723|ref|XP_001612268.1| phosphatidylinositol 3- and 4-kinase family protein [Babesia bovis]
gi|154799522|gb|EDO08700.1| phosphatidylinositol 3- and 4-kinase family protein [Babesia bovis]
Length = 3440
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
AL L + ++D+A + + + D + + L MY AS ++ K A ++
Sbjct: 2673 LEHALTLQHQGQIDEAIGALKALARNDFEGFYNLVKMYTASNMLI---PKRAIFHMREIL 2729
Query: 117 NDDLAPLAVR 126
AP + +
Sbjct: 2730 K--AAPQSFK 2737
>gi|186685148|ref|YP_001868344.1| hypothetical protein Npun_F5064 [Nostoc punctiforme PCC 73102]
gi|186467600|gb|ACC83401.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 307
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 66/191 (34%), Gaps = 14/191 (7%)
Query: 13 KCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVG----ENFAQALELFNSNK 68
+ K + L +L++ + L + + G + Q L+ + K
Sbjct: 2 RLSFSKYPIAGLVSLTLLVVSIPSPSLSLSEYVPSELAKSNGKTAIDWLNQGLQAIQAGK 61
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+ DA ++F++ D L N+ +A + +A + D A
Sbjct: 62 VKDAIAAFKQAAKLDPTLAPAYYNLGLAYRQTGQLQP-SADAFYRATQADPKFAPAF--- 117
Query: 129 ATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF-E 186
A L A + + + + +L +P FA+ G+ + G +KA F +
Sbjct: 118 ANLGGALLEGNNLQLANDYLQRALEL----DPKLGFAHYNFGLVREQQGDCEKAIASFKQ 173
Query: 187 ELAKDNNSPFG 197
+ N+P
Sbjct: 174 AIEYSKNAPEP 184
>gi|317011077|gb|ADU84824.1| hypothetical protein HPSA_04185 [Helicobacter pylori SouthAfrica7]
Length = 218
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
+S+ + + YKW+ +++ ++ L D HE+ K + + + +AL
Sbjct: 15 KSDEKLLEGAFRLEKFFKRYKWVLLFIVVAFIAYLGDTKLQDYKHEQTKERITQIYNEAL 74
Query: 62 E----LFNSNKLDDARSSFEKI----LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
E + NKL + + + ++ N + +S + K A +
Sbjct: 75 ESPNNIALQNKLKEVAPQLYDLYQFARASEHNDVNAFKKLAQSSNEIVK---TFAQYSYA 131
Query: 114 KVANDDLA---PLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
++ D ++ + LQA +L + +S + I+ + LS
Sbjct: 132 SLSRDKNLLEKSPILKEMSALQAVDLLYEENSKDAITNAHKNLST 176
>gi|313674445|ref|YP_004052441.1| hypothetical protein [Marivirga tractuosa DSM 4126]
gi|312941143|gb|ADR20333.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
tractuosa DSM 4126]
Length = 1022
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 3/102 (2%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ + G+ K A + F KV D A Q A + ++ YE
Sbjct: 577 AYFQKGVVNSIDGEIKLANQSFDKVIKDYS-NSNYYDNAIFQKAQLAFESGQYETAINGF 635
Query: 151 QKLSE--PSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
L + P +P+ +A ++ + + A+ + + +
Sbjct: 636 SNLLKNLPQSPLRPYAYSKRALAYFNLQQYENAEEDYTLILQ 677
>gi|149376327|ref|ZP_01894090.1| hypothetical protein MDG893_05329 [Marinobacter algicola DG893]
gi|149359341|gb|EDM47802.1| hypothetical protein MDG893_05329 [Marinobacter algicola DG893]
Length = 955
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 57 FAQALELFNSNKLDDARSSFEK----ILSQD---NKLYNPLSN--MYIASILVAKGDTKN 107
+A LF + +A +++++ + D + L+ A L GDT
Sbjct: 567 LLKAHSLFELGRYAEAETTYQQTLRVMAETDERRPDVIESLAASVFRQAEALADAGDTAG 626
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
A FL+V A+R A AA++L++
Sbjct: 627 AVGEFLRVGEVAPT-SALRANAEYDAATLLIE 657
>gi|269218199|ref|ZP_06162053.1| tetratricopeptide TPR_4 [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212327|gb|EEZ78667.1| tetratricopeptide TPR_4 [Actinomyces sp. oral taxon 848 str. F0332]
Length = 597
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 23/179 (12%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYN------PLSNMYIASILVAKGDTKNAAEIFL 113
A + + A +++ +L + + + +A A GD + A EI+
Sbjct: 212 AKAYADGGEPQKAIDAYKALLVDITEALGPDHTNTVTARVNLAYGYAAAGDLQGAIEIYE 271
Query: 114 KVAND--------DLAPLAVRY-AATL--QAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
+ D + L +R A L QA + + + P +P
Sbjct: 272 ALLADPEPVVDSEEDPSLVLRDNLAYLYWQAGMPQKAVGIFRILLSEWTRSLGPDHPDVL 331
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDN------NSPFGISTRSQMILANIIASDQR 215
L L G + +A +FE L D + P + TRS + A + A +
Sbjct: 332 STRNNLARMHLDAGNLGEAIELFESLIADQIRILGFDHPDTLITRSNLAEAYMAARKEE 390
>gi|109896669|ref|YP_659924.1| HemY-like [Pseudoalteromonas atlantica T6c]
gi|109698950|gb|ABG38870.1| HemY-like protein [Pseudoalteromonas atlantica T6c]
Length = 393
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 9/96 (9%)
Query: 17 GKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSF 76
G + W+ LI++I W + +K+ F L +AR
Sbjct: 54 GLLLFSWLIKKLIMIISGSKNWLGNWGSRKKKRA------FTNGLIALAEQNFLEARKQL 107
Query: 77 EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
I +D N L+ A + + A E +
Sbjct: 108 ASIEQEDFDGLNLLA---AAEAELQLQNPAGAQEYW 140
>gi|322435663|ref|YP_004217875.1| cellulose synthase operon C domain protein [Acidobacterium sp.
MP5ACTX9]
gi|321163390|gb|ADW69095.1| cellulose synthase operon C domain protein [Acidobacterium sp.
MP5ACTX9]
Length = 1721
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 16/177 (9%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFA-----QALELFNSNKLDDARSSFEKILSQDNKLYNPL 90
+ E++ + A N L +A F++IL++ + N L
Sbjct: 211 GGGGRGRPLTPEQRAEQALDRTRTREDRSAYRALNQKHLPEAERLFKEILAKHPEEANAL 270
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV-------RYAATLQAASILVDTSSY 143
+ M + +A+ + A F + D + R+ T+ ++ ++ +
Sbjct: 271 AGM--GYVRMAQANFAGAITYFSQAQQDGSKDPRIEGALRTSRFWNTMAEGALDLNDGNL 328
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK-DNNSPFGIS 199
K + + P A E LG + L+ + A TIF + K +P
Sbjct: 329 PGAEKNY-RAALVMWPNRPEALEGLGGTLLRAQQPAAALTIFVQYVKVAPAAPHAWR 384
>gi|299068997|emb|CBJ40245.1| putative non ribosomal peptide synthetase protein [Ralstonia
solanacearum CMR15]
Length = 5954
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 17/179 (9%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
APL L +L A + +E + + AL + +A + +
Sbjct: 528 APLHSLTVLPAAERQLILARWNETAADYARQASLSALFEAQVVRAPEAIAIEQDARQLSY 587
Query: 85 KLYNPLS-----NMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ--AASIL 137
+ N L+ + A + GD + D L A L+ A +
Sbjct: 588 RALNALANRLAWRLREAGV--KPGDPV-------ALLLDRSIELVASELAILKCGAVYVP 638
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
+D ++ + + L + E + + A + ++ L+ V A + A D N P
Sbjct: 639 LDRNAPQARQRFLLEDVEAGLLLSESALDAPALAGLRRIDVDDALSD-SAGAVDANLPP 696
>gi|307543974|ref|YP_003896453.1| hypothetical protein HELO_1385 [Halomonas elongata DSM 2581]
gi|307215998|emb|CBV41268.1| hypothetical protein HELO_1385 [Halomonas elongata DSM 2581]
Length = 219
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 8/122 (6%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDA------RSSFEKILSQDNKLYNPL 90
W D + + + Q L L + +LDDA + + LY +
Sbjct: 38 GWKTWQDY-QAGQAEAASQRYQQLLTLSSQEQLDDAARERAEEVATTLVEEHGGTLYADM 96
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ + A + V GD A E + + + A L+ A + V E K L
Sbjct: 97 AQLLSARLSVEGGDQAAARETLEALIANSEHD-YLSGLARLRLARLQVAADEAEAALKTL 155
Query: 151 QK 152
Sbjct: 156 DG 157
>gi|167892751|ref|ZP_02480153.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 7894]
Length = 416
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 180 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDPRDAAVIAR-TD 238
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
ASIL K AA+ + D +RY A Y + + L+ L
Sbjct: 239 ASILFTSKRYKEAADRLAQAVEDFPDDPDLRY----DYAMASEKIGQYTTMEQQLRLLMR 294
Query: 154 SEPSNPMHQFA 164
++P NP A
Sbjct: 295 AQPDNPQAYNA 305
>gi|162452960|ref|YP_001615327.1| hypothetical protein sce4684 [Sorangium cellulosum 'So ce 56']
gi|161163542|emb|CAN94847.1| hypothetical protein sce4684 [Sorangium cellulosum 'So ce 56']
Length = 849
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 43/156 (27%), Gaps = 6/156 (3%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ A L S KLD+A + +L + +A I +
Sbjct: 33 QPRDAARPEDAAPELGVAESLRQSGKLDEAEAQLLALLGDPRAAVQAQAVGKLARIARTR 92
Query: 103 GDTKNAAE-IFLKVANDDLAP---LAVRYAATLQAASILVDT--SSYEEISKILQKLSEP 156
GD A E ++ + D A + L I D + L+ L
Sbjct: 93 GDAAKAEELLYQAMRMDRAAGLRAQEISDGTVLVFTLITADRRFGEARAVMDSLRPLLAE 152
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
A + + G + A + E +
Sbjct: 153 DPAARADALYYEALIPYEAGDFRAALRLLREAQAEA 188
>gi|149921781|ref|ZP_01910227.1| TPR domain protein [Plesiocystis pacifica SIR-1]
gi|149817342|gb|EDM76816.1| TPR domain protein [Plesiocystis pacifica SIR-1]
Length = 1013
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 88 NPLSNMYIASILVAK-GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
L+ M + + + + + A E + ++A AA Q A + ++
Sbjct: 241 PELAAMQLEAEIYERLEQAEAAIEAYERIATTHPDDPQAVSAANKQIAELRLELQ----- 295
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+Q+L A G+SAL+ GK+ A+ ++ ++
Sbjct: 296 VARIQELQGGEPTPEAEAAYNRGLSALRGGKLDTARAQLQQAVDES 341
>gi|257060748|ref|YP_003138636.1| hypotheticalprotein [Cyanothece sp. PCC 8802]
gi|256590914|gb|ACV01801.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
Length = 270
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 15/131 (11%)
Query: 64 FNSNKLDDARSSFEK---ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DD 119
+ NKLD+A + F + + + Y + + L +G + A + V D
Sbjct: 85 VSQNKLDEAIADFNQAITLAPNEPDPY-----LNRGAALEGQGKYQEAITDYNHVLELDP 139
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+A + + + E+ K ++ P FA + +++ + G Q
Sbjct: 140 HDAMAYNNRGNAEGGLGQWEKA-LEDYQKAVE-----IQPNFAFAKANVALASYQLGNTQ 193
Query: 180 KAKTIFEELAK 190
+A ++ +
Sbjct: 194 EALNQMRKIVR 204
>gi|115916059|ref|XP_782499.2| PREDICTED: similar to MGC83808 protein, partial [Strongylocentrotus
purpuratus]
Length = 1398
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
+E +G+ + +L + +DA + + + + + + + + + G+
Sbjct: 526 NEAAAQALGDAY----DLLDE--KEDAIAVYTAVTKRAALGGAKWAWLRLGLVQLRAGNA 579
Query: 106 KNAAEIFLKVANDDLAPLA 124
A E F V D +
Sbjct: 580 TEAVECFQAVLRADPDDMI 598
>gi|229593976|ref|XP_001025860.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|225567179|gb|EAS05615.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 674
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KV 115
F ++ FN+N +DA+ FEK + + +L + MY+ +I KG + + E+ L +
Sbjct: 114 FKLGVDQFNTNMHEDAKKFFEKAIELNPQLGE--AYMYLGAISQQKGMIEESKELLLKAI 171
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ--KLSEPSNPMHQFANEILGISAL 173
DD A Y A A+ ++ K ++ + + P++ +A +LG+
Sbjct: 172 QLDDKCYSAHMYIANYYLAT--------NQVKKAIKSCEKALKIGPINHWAYHVLGMCYY 223
Query: 174 KFGKVQKAKTIF 185
+ ++KAKT +
Sbjct: 224 RQQDLEKAKTYY 235
>gi|158425090|ref|YP_001526382.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571]
gi|158331979|dbj|BAF89464.1| TPR repeat protein [Azorhizobium caulinodans ORS 571]
Length = 779
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 15/142 (10%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVAND 118
AL L ++ +A ++ + D + L++ S+L+ GD A E F +A
Sbjct: 100 ALCLRQIGRIPEAVAALRISTALDPRNVEALADY--GSLLLQMGDRAAAREAFEKALALR 157
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
P+A A L A S +++ + + + P + A LG + + G
Sbjct: 158 PNHPVAKAGIARLSAV-----DGSLDDLLRTVAE-----QPGNGQAALALGCAIISSGGE 207
Query: 179 --QKAKTIFEELAKDNNSPFGI 198
AK E + + +P I
Sbjct: 208 PDDAAKVWVEAVQRGALTPEDI 229
>gi|108763994|ref|YP_632814.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467874|gb|ABF93059.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 581
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 50/172 (29%), Gaps = 34/172 (19%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIV----------GENFAQALELF 64
K K +A ++++ L + G F A L
Sbjct: 196 KKKKLITLGVAGAVVVLFAGLGVVRMNVQKQQAVAAEEARQGKSHRERLGSLFQDAKNLV 255
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLS--------------NMYIASILVAKGDTKNAAE 110
K +A++ E++ ++ Y ++ + A +AK + A
Sbjct: 256 REGKWVEAKAKLEELQTEAP-GYPGVADYLGHAAREIPVQEKLTAAKEALAKKELGKAGT 314
Query: 111 IFLKVAND-------DLAPLAVRYAA--TLQAASILVDTSSYEEISKILQKL 153
+ + A+ AA + A L+D + + I + +
Sbjct: 315 LLASAGESQFLYEQVNSTKRALSEAADTRTREARKLLDENQLDMAKAITEDI 366
>gi|239907302|ref|YP_002954043.1| hypothetical protein DMR_26660 [Desulfovibrio magneticus RS-1]
gi|239797168|dbj|BAH76157.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 221
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 10/163 (6%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN 92
A++ G EK + +GE + + D ++ E + +
Sbjct: 43 GGYALFGVYQKGQVEKAEAALGE-------IITTKAGADRVAALETLAKSAPEGAKAGIY 95
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
+ +A GD AA F VA AP ++ A L A+ L + +L+
Sbjct: 96 LELAKTAQGLGDFTKAASAFEAVAK--SAPSGMKTIAGLGEAAALSRAGQDAKAVDVLES 153
Query: 153 LSEPS-NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
L+ + + L ++A G+ QKA +E + D N
Sbjct: 154 LAAKAPKIFAMTIDRQLAVTAEAAGQWQKALAAYERMKADGNV 196
>gi|182440134|ref|YP_001827853.1| hypothetical protein SGR_6341 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468650|dbj|BAG23170.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 1375
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 11/110 (10%)
Query: 95 IASILVAKGDTKNAAEIFLKVANDD--------LAPLAVRYA--ATLQAASILVDTSSY- 143
+A+ G T A + +V D L R + A + S
Sbjct: 828 LAASYREAGRTDEAISLQEQVLADRERVLGPDHPDTLTTRDVLAGAYREAGRTDEAISLQ 887
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
E++ +++ P +P + L +S L+ G+ A + + + D
Sbjct: 888 EQVVADRERVLGPEHPDVLASRHNLALSYLRAGRAAAAVELLQRVLTDRE 937
>gi|328952032|ref|YP_004369366.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 599
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 17/110 (15%)
Query: 39 FYLFDGSHEKKKNIVGE-----------NFAQALELFNSNKLDDARSSFEKILSQDNKLY 87
YL + + + GE L F DDA F ++L
Sbjct: 282 LYLLNDQYTEALQAFGEIKRISKNEPETALRIGLLFFEQKYFDDAIREFREVLISRKG-- 339
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
+ ++A+ L KGD A + +++ + + A L+ A IL
Sbjct: 340 PDQARFFLAAALEEKGDLVAAMREYEQISRQSESYIP----ARLRMAYIL 385
>gi|311693236|gb|ADP96109.1| tetratricopeptide TPR_4-containing protein [marine bacterium HP15]
Length = 440
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 9/124 (7%)
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDD-LAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
GD A + F + + +P + L D + E + L
Sbjct: 32 FRAGVEAFEAGDLNAAKQRFQRAVDAGLRSPSLFYNLGVV--CYQLGDYGAAESAFRSLL 89
Query: 152 KLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIA 211
S + A LG+ AL + +A+ FE+ A ++P I ++ L +
Sbjct: 90 DGSNGA-----LARYNLGLVALATEESAEARRWFEQ-ASAESAPDKIRALARAQLNKLDG 143
Query: 212 SDQR 215
R
Sbjct: 144 GSPR 147
>gi|268326188|emb|CBH39776.1| hypothetical secreted protein, containing tetratricopeptide repeats
[uncultured archaeon]
Length = 476
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 31/231 (13%)
Query: 8 NSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKK-------KNIVGEN---F 57
+Y + K ++ + + AI + KK G
Sbjct: 248 RAYTYMGEWDKAESDYLKAIELDPECGSAIGHLIHLYWDWKKCSELMVLSAATGRTAPSL 307
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY----IASILVAKGDTKNAAEIFL 113
A+ + + D A S E K + L +A I +GD NA +
Sbjct: 308 ARGICYAELEQYDKAISDLE--APTTYKGHGVLWGPRGKRCLAEIYRERGDEDNATAVLE 365
Query: 114 KVAN--DDLAPLAVRYA-ATLQAASILVDTSSYE----EISKILQKLSEPSNPMHQF--- 163
+ N + R A + V+ Y+ ++ ++++ +
Sbjct: 366 EAINMSNTSIAKGRRTFTAYCERGLTYVELKEYDKAISDLLEVIEVKAASDREYGHSNYY 425
Query: 164 --ANEILGISALKFGKVQKAKTIFE---ELAKDNNSPFGISTRSQMILANI 209
A+ LG + L G+ +KA+ FE EL + P I + +L+N+
Sbjct: 426 LDAHIGLGKAYLGMGEKEKAREYFEKAIELLQRPGGPEPIKEEVEELLSNL 476
>gi|167043887|gb|ABZ08575.1| putative TPR domain protein [uncultured marine crenarchaeote
HF4000_APKG3H9]
Length = 410
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 8/135 (5%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+A L+ ++ D+A +++L +D LY + Y +L G+ + A F KV
Sbjct: 50 KAATLYELSRFDEAMKYCDQVLEEDP-LY-LHALFYKGLVLGKMGEHQKAISFFDKVLQT 107
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D A YE+ K +K + + P + A G + K GK
Sbjct: 108 DRK----HVLALYNEGIQFGKIGKYEDAVKFFEK-TLEAEPENSSAMYETGRALAKLGKT 162
Query: 179 QKAKTIFE-ELAKDN 192
+++ F+ + D
Sbjct: 163 KESLLWFDRAIKVDA 177
>gi|261404029|ref|YP_003240270.1| tetratricopeptide repeat-containing protein [Paenibacillus sp.
Y412MC10]
gi|261280492|gb|ACX62463.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. Y412MC10]
Length = 581
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 134 ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
A L++ + + K+L+++ + NP A L ++ G+ AK E+
Sbjct: 164 ARALLEEGKFAQAVKLLEEIVKD-NPDFLAARNNLALAYYYMGRFDTAKRTIGEVLD 219
>gi|190571349|ref|YP_001975707.1| TPR domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357621|emb|CAQ55062.1| TPR domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 288
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 65/161 (40%), Gaps = 21/161 (13%)
Query: 43 DGSHEKKKNIVGENFA------QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
D + K G+NF +A + F + A S +I+++ Y+ + + +
Sbjct: 78 DKFNIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFP--YHESALIGLG 135
Query: 97 SILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
+I A + K A EI+ ++ + P ++ T+ + + + L ++ +
Sbjct: 136 NIYYANKEFKKAVEIYTRLLKEYPSNPYVLKNFLTIISQY---------DPNLALSEMLK 186
Query: 156 PSNPMHQFA--NEILGISALKFGKVQKAKTIF-EELAKDNN 193
+ + A + LG+ +K G KAK ++ D N
Sbjct: 187 LYDTLRNSAPLSANLGLIYMKKGDYIKAKEYMKAAISLDQN 227
>gi|90416495|ref|ZP_01224426.1| hypothetical protein GB2207_04817 [marine gamma proteobacterium
HTCC2207]
gi|90331694|gb|EAS46922.1| hypothetical protein GB2207_04817 [marine gamma proteobacterium
HTCC2207]
Length = 760
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 52/126 (41%), Gaps = 8/126 (6%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A++ LD A ++ +L D+ + M +A + ++G T+ E++ V +
Sbjct: 585 AIDQHLRGNLDSAAEAYLAVLKIDSGF--NAARMNLAQLYYSQGKTEATEELYRTV--IE 640
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
P A A ++ + + YE+ + L+ + N A L + + GK
Sbjct: 641 REPQA--SEAHYSLGLLMAEQARYEQAALSLESAATTGNNPR--AWYNLAVLNQQSGKSL 696
Query: 180 KAKTIF 185
+A+ +
Sbjct: 697 EAEKAY 702
>gi|261416281|ref|YP_003249964.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|156072342|gb|ABU45493.1| TPR domain protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372737|gb|ACX75482.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325833|gb|ADL25034.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 746
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 63/164 (38%), Gaps = 6/164 (3%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLK 114
F +A N A+S +E + + + + + +I +G A +
Sbjct: 375 AFYKAKSFENLRMHKAAKSVYEDAIKRYPQSDQRAKYHFQLMNIDYKEGKYTEAMTKYQN 434
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+A A A I + Y+E +L + P N + +A +GI+ +
Sbjct: 435 IAQKFGESDVKAD-ADYVAGQIKFEQGLYQESVDLLASIL-PGNANYFYARYTMGIANSR 492
Query: 175 FGKVQKAKTIFEELAK---DNNSPFGISTRSQMILANIIASDQR 215
GK +A+ F ++ + N S + +++ L ++ S ++
Sbjct: 493 MGKFDEAENCFRDITEQPVSNQSERDLQDAARVKLGHLFFSGEK 536
>gi|167760134|ref|ZP_02432261.1| hypothetical protein CLOSCI_02506 [Clostridium scindens ATCC 35704]
gi|167662259|gb|EDS06389.1| hypothetical protein CLOSCI_02506 [Clostridium scindens ATCC 35704]
Length = 1090
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 10/106 (9%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK-LYNPLSNMYIASILVA 101
DG +K + V AL+ + DDA + + Y Y +
Sbjct: 651 DGWKDKMRTPVHNYLELALDYIKAGLYDDALNILASCTADSPMLGY------YQGYVYER 704
Query: 102 KGDTKNAAEIF---LKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
KGD AA+++ D P L++A+ L+ + Y
Sbjct: 705 KGDAAKAAKMYQQGEAACPDYCFPNRAEEVVILESAASLLGKAPYA 750
>gi|75675934|ref|YP_318355.1| hypothetical protein Nwi_1742 [Nitrobacter winogradskyi Nb-255]
gi|74420804|gb|ABA05003.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 451
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 118 DDLAPLAVRYAATLQA----ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
D L + A L+A A V YE L+++ NP LG+
Sbjct: 48 DALFQQMYKNPADLEASFKFAEQAVKRGDYEAAIGALERMLF-FNPNLPRVKLELGVLYF 106
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
K G + A++ F+E K ++P I + + L I
Sbjct: 107 KLGSYELARSYFQEAIKGADAPDDIRAQVRAYLTEID 143
>gi|326915306|ref|XP_003203960.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Meleagris gallopavo]
Length = 1310
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
V + K+A F + + L P A QA ++ D + + + +++ +++
Sbjct: 1030 QVRRDYLKDAVAAFQGMLDSGLLPSRPAVIALTQALAMKGDLRNLKALENMVESITKSIG 1089
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEEL----AKDNNSP 195
+ + ++ + + A E L A+D + P
Sbjct: 1090 LSSSLISNAIALAHTQNNDLDAAVEYLEPLLISGAQDPDQP 1130
>gi|325954857|ref|YP_004238517.1| hypothetical protein Weevi_1235 [Weeksella virosa DSM 16922]
gi|323437475|gb|ADX67939.1| TPR repeat-containing protein [Weeksella virosa DSM 16922]
Length = 233
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 21/183 (11%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSS------ 75
K I ++ +++L+ +F + K + + A LF + + A +
Sbjct: 35 KAIGIVIGIVVLAALGYFAYIKLIVDPKSDQALKEMVTAERLFEQDSIGQALNGSKGSYM 94
Query: 76 -FEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
++I+ + N L+ + GD A ++F + D +A +Y
Sbjct: 95 GLQQIVDEYGNTDAGNLAKLKAGVAYYKLGDYTTAIKMFEDFSTKDPVLMAQKYG---MI 151
Query: 134 ASILVDTSSYEEISKILQKLSEPSN------PMHQFANEILGISALKFGKVQKAKTIFEE 187
+ LV T EE K +E +N + A I A+ GK + A F+
Sbjct: 152 GNCLVQTGKVEEGLPYYVKAAEATNVVTIEQTYYTKAGNI----AMSLGKNEDALKYFQT 207
Query: 188 LAK 190
+
Sbjct: 208 IVD 210
>gi|39998114|ref|NP_954065.1| glycosyl transferase, group 1/2 family protein [Geobacter
sulfurreducens PCA]
gi|39985059|gb|AAR36415.1| glycosyl transferase, group 1/2 family protein [Geobacter
sulfurreducens PCA]
Length = 2401
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 47 EKKKNIVGENFAQALE--LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
E++ GE +A L K ++A ++F ++ + L++M L G
Sbjct: 2178 EEQDQEPGERATEAEARRLKEDGKYEEALTAFSRVAEAGDSS--ALADM--GDCLAQLGR 2233
Query: 105 TKNAAEIFLKVANDDLAP 122
AA +L+ + D A
Sbjct: 2234 LDEAAARYLEALDADGAN 2251
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 51/155 (32%), Gaps = 15/155 (9%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM 93
+L + + + +G+ L +LD+A + + + + D N + +
Sbjct: 2205 ALTAFSRVAEAGDSSALADMGDC------LAQLGRLDEAAARY--LEALDADGANLKALV 2256
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPL-AVRYAATLQAASILVDTSSYEEISKILQK 152
+ + + +G A F + D A A+ ++ D + +
Sbjct: 2257 GLGVVSLVQGKQVKAVTWFNRALKADPANAKALCGLGMVRNMQNKHDEAF--SLLAR--- 2311
Query: 153 LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ ++P A L + G+ +A +
Sbjct: 2312 -AVDADPEGLTALHELIRLSYATGRFDEAGERLDR 2345
>gi|107029011|ref|YP_626106.1| hypothetical protein Bcen_6269 [Burkholderia cenocepacia AU 1054]
gi|116689831|ref|YP_835454.1| hypothetical protein Bcen2424_1810 [Burkholderia cenocepacia
HI2424]
gi|105898175|gb|ABF81133.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
gi|116647920|gb|ABK08561.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
Length = 209
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 67/201 (33%), Gaps = 11/201 (5%)
Query: 4 NNDANSYKGKCKMGKC--CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL 61
+ + K + WI +++ W Y ++ + Q
Sbjct: 5 DEQESIESLKAWWARWGNLTTWIVLAALVVAAGFNGWNYW----QRRQAAEASGLYEQVQ 60
Query: 62 ELFNSNKLDD-ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ +N AR++ + + Y ++ + A+ + A+ L+ D
Sbjct: 61 KAAAANDKATMARAAADMEDKFGSTPYAQMTAL-AAAKTLYAAGDAAGAKAQLQWTVDHA 119
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+ A L+ AS+L+D +Y+ +L P + + G GK
Sbjct: 120 KDDEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPVDAFKGLVADRRGDLLAAQGKTDD 177
Query: 181 AKTIFEELAKDNNSPFGISTR 201
A+ + +LA D S S R
Sbjct: 178 ARAAY-KLALDGLSKDDQSAR 197
>gi|330828051|ref|YP_004391003.1| membrane peptidase, M23/M37 family [Aeromonas veronii B565]
gi|328803187|gb|AEB48386.1| Membrane peptidase, M23/M37 family [Aeromonas veronii B565]
Length = 301
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE 77
K W+ +L ++ W + +K + A A + D+AR
Sbjct: 19 KQRLAWVGGILFSLLALGGGWLWQSWH---QKMEALEVALAVAEQQSVDQSGDEAREQLA 75
Query: 78 KILSQDNKLYNPLSNMYIASI-LVAKGD 104
+ +Q + L + L + D
Sbjct: 76 MLAAQVGTMQGQLGRLNALGERLTEQAD 103
>gi|254446091|ref|ZP_05059567.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198260399|gb|EDY84707.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 218
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNM---YIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+A + K +K LS + A G+ A + + P +
Sbjct: 76 YQEASAEGTKAEWAADKTGKALSGFAFKELGDEAYANGNLAEAENYYREAVASTKEP--I 133
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI---LGISALKFGKVQKAK 182
+ AAT+ A LVD + +LQ ++ NP+ E L A K G A+
Sbjct: 134 KEAATIALAITLVDQGKTSDAKALLQPIA--DNPLALAQAEAQYRLASIATKEGDADTAR 191
Query: 183 TIFEELAKDN 192
++ E + +
Sbjct: 192 SLIESINEQA 201
>gi|94969043|ref|YP_591091.1| rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94551093|gb|ABF41017.1| Rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 504
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 36/161 (22%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA------- 108
F A +L + + A + + +++ + + + A + K D
Sbjct: 317 EFLHAAQLLEKRETNTALAILRNYVKKNSNVIDAWELLQQA--QIQKNDANEQRQETLPV 374
Query: 109 -AEIFLKVANDDLAPLAVRYAATL------QAASILVDTSSYEEISKILQKLSEPSNPMH 161
++L V ND+ A L +R L + + + SYE + +
Sbjct: 375 LIRLYLGVGNDERALLHLREFRRLGGTILPASTWLEL-ARSYERVEQ-----------WE 422
Query: 162 QFANEI--LGISALKFGKV------QKAKTIFEELAKDNNS 194
A E LGIS + A+ +L + ++
Sbjct: 423 IAAREFENLGISYYATDRTSLTALLSAARIYLTKLDRPADA 463
>gi|317009958|gb|ADU80538.1| putative paralysed flagella protein PflA; putative signal peptide
[Helicobacter pylori India7]
Length = 803
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 57 FAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+ A L +N A +++ +L N Y PL+ M +A D NA+ +F K
Sbjct: 275 YYVAKALDENNNYKQAMRYYKRILLEYQNSRYAPLAQMRLAIEAAEGSDLSNASMLFKKA 334
Query: 116 ANDDLAPLAVRYAA 129
+D + A
Sbjct: 335 FSDAKDKESASEIA 348
>gi|218439610|ref|YP_002377939.1| hypothetical protein PCC7424_2659 [Cyanothece sp. PCC 7424]
gi|218172338|gb|ACK71071.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 565
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 55/146 (37%), Gaps = 18/146 (12%)
Query: 54 GENFAQALELFNSNKLDDARSSF---EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
G+ F N+L+ A +S+ K+ + +Y + + L A +
Sbjct: 45 GDRFLA------QNQLEKAINSYSTATKLQANFATVY-----LRLGKALQKNQQFTEALK 93
Query: 111 IFLKVANDDLAPLAVRYAAT--LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
+ + + A+ + ++L+ + E I +++ +P+ AN L
Sbjct: 94 AYNQAFLINPDLTVQSDLASDLTRLGAVLLKKGNVSEAI-IAYQIAVAIDPLAIEANHNL 152
Query: 169 GISALKFGKVQKAKTIF-EELAKDNN 193
G + + + Q+A F + + D +
Sbjct: 153 GKALAQQQRWQEAGQAFNQVILFDPD 178
>gi|148237288|ref|NP_001084796.1| hypothetical protein LOC431836 [Xenopus laevis]
gi|118835718|gb|AAI28925.1| LOC431836 protein [Xenopus laevis]
Length = 495
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 9/101 (8%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY-AATLQAASILV-------DTSS 142
+ + +IL+ +GD + A + FL V + +Q V +
Sbjct: 107 ARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQLERVQEVERNVGGASEAYERRD 166
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
Y +L+K+ +P A E+ L+ G++ A
Sbjct: 167 YYGAIALLEKVI-EFSPWDPSARELRAECYLQVGELSNAVQ 206
>gi|790431|emb|CAA59287.1| low affinity penicillin-binding protein 5 (PBP5) [Enterococcus
faecium]
Length = 678
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I++ + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIVAASGGYFYYRHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLD 70
NK
Sbjct: 62 NKAA 65
>gi|206603388|gb|EDZ39868.1| Conserved protein of unknown function [Leptospirillum sp. Group II
'5-way CG']
Length = 190
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ Q+ E +++L +A++ +++ + + +N+ A++ + D A +
Sbjct: 31 DLLKQSSEDIRNHRLSEAQAILDQLKTTLPENPAVWNNL--ATVAFLQKDYSLALAMMDN 88
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+ +R + A +L+ EE +++L + P + +L I+ K
Sbjct: 89 ALSLRPTNPDLR----MNKARLLLAMGQNEE-ARLLLRRMIRLRPWPKGYRILLAIAEKK 143
Query: 175 FGKVQKAKTIFEE-LAKDNNSP 195
G + A+ +FEE +A + P
Sbjct: 144 TGHREAARILFEEMIANHPDDP 165
>gi|326315755|ref|YP_004233427.1| hypothetical protein Acav_0937 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323372591|gb|ADX44860.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 667
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 53/153 (34%), Gaps = 9/153 (5%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F + L K +A ++F+ Q K + + A G A F +
Sbjct: 475 RFNMGVALQQQKKHAEAIAAFDDAEKQGFK--DLQLYYHRGESEFALGRYAEAYAQFDQG 532
Query: 116 AND------DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+R L+ A + + +++ K L P++P + LG
Sbjct: 533 LRTELPGLSSAEMDRIRQLMHLRRAESAIGANRFDDAIKDFNALL-PASPSNPRLLLGLG 591
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
++ + G ++A +F++L + R+
Sbjct: 592 MAHVGKGDTREAIAMFDQLIARAPNAAAYYGRA 624
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 34/144 (23%), Gaps = 15/144 (10%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ + +A+ +F ++ + + L + A F L
Sbjct: 449 LDRGSVAEAQKAFAT--AEALGALRGAARFNMGVALQQQKKHAEAIAAFDDAEKQGFKDL 506
Query: 124 AVRY--------AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ Y A D E+ + + + SA+
Sbjct: 507 QLYYHRGESEFALGRYAEAYAQFDQGLRTELPGLSSAEMDRIRQLMHLRR---AESAIGA 563
Query: 176 GKVQKAKTIFEELAKDNNSPFGIS 199
+ A F L SP
Sbjct: 564 NRFDDAIKDFNALL--PASPSNPR 585
>gi|257898495|ref|ZP_05678148.1| penicillin-binding protein PBP5 [Enterococcus faecium Com15]
gi|257836407|gb|EEV61481.1| penicillin-binding protein PBP5 [Enterococcus faecium Com15]
Length = 678
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I++ + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIVAASGGYFYYRHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLD 70
NK
Sbjct: 62 NKAA 65
>gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 530
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F A +L +LD+A +S+ + +++ + N+ A L +G A + +
Sbjct: 6 FDTANQLLRKGQLDEAIASYNQAIAESPQSAWYYHNLGEA--LSQQGKIDEAIAAYRQAT 63
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEIS--KILQKLSEPSNPMHQFANEILGISAL 173
+ + + TL + + E +S + +L + + L + +
Sbjct: 64 ELNPNSAWSYDNLGTL----LNQQGNLPEAVSCFRKAIELDPDFSEFYHN----LALVLI 115
Query: 174 KFGKVQKAKTIFEE 187
K G++++A ++ ++
Sbjct: 116 KEGRLEEAVSLLQK 129
>gi|288960117|ref|YP_003450457.1| hypothetical protein AZL_a03820 [Azospirillum sp. B510]
gi|288912425|dbj|BAI73913.1| hypothetical protein AZL_a03820 [Azospirillum sp. B510]
Length = 484
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 9/147 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E A AL+ + +L + + +IL D L M I +GD A ++ +
Sbjct: 12 EALAIALDHLKAGRLAEGEELYARILDADPGNAEALHRM--GFIAGRRGDMDRAFDLLSR 69
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A+ TL ++ + + + + P H E L
Sbjct: 70 SVERAPDADALFNLGTLHHRALRTEEAIVAYRRALALRPDFPDCDYHLS--EALQ----G 123
Query: 175 FGKVQKAKTIFEELAKD-NNSPFGIST 200
G++ +A + L + P G
Sbjct: 124 AGRLDEALAALDTLLDRHPHYPAGWRQ 150
>gi|289192976|ref|YP_003458917.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp.
FS406-22]
gi|288939426|gb|ADC70181.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp.
FS406-22]
Length = 284
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 13/135 (9%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ +AL L +L++A + K L L+ + A IL++ A + +
Sbjct: 153 YGKALVLHKLGELEEALNCLNKALEIKPDF--LLALIKKAQILISLNKLSEAIITLKRAS 210
Query: 117 NDDLAPL-AVRYAATLQAASILVDTS--SYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ + + + +++++ + NP H A I+
Sbjct: 211 EIRPDDVGVLFNLGLVHLRLKEFKEAIDAFDKVLER--------NPFHLGARLGKAIAYE 262
Query: 174 KFGKVQKAKTIFEEL 188
K G++ KA I++E+
Sbjct: 263 KLGELDKALKIYDEI 277
>gi|257884551|ref|ZP_05664204.1| penicillin-binding protein PBP5 [Enterococcus faecium 1,231,501]
gi|257820389|gb|EEV47537.1| penicillin-binding protein PBP5 [Enterococcus faecium 1,231,501]
Length = 678
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I++ + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIVAASGGYFYYRHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLD 70
NK
Sbjct: 62 NKAA 65
>gi|240137308|ref|YP_002961777.1| hypothetical protein MexAM1_META1p0562 [Methylobacterium extorquens
AM1]
gi|240007274|gb|ACS38500.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 511
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 52/163 (31%), Gaps = 11/163 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A + + + D A K + L + + +L + D + AA+I
Sbjct: 231 LTAAAQRHEAGEPDSATEQALKAVKLAPDLVP--AAVIAGRLLARRNDLRKAAKIIEAAW 288
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQFANEILGISALKF 175
P L + + T + + L++ + + ++ +A +
Sbjct: 289 KATPHPE-------LAKVYLNLRTGDSARDRLARAENLAK-LSSWEPESRLVIAQAATEA 340
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
+A+ L D + +++ A A R+++
Sbjct: 341 KDFGRAREALAPLTDDRPTARVCRMMARIEAAEHGAESGRSRE 383
>gi|257887377|ref|ZP_05667030.1| penicillin-binding protein PBP5 [Enterococcus faecium 1,141,733]
gi|257823431|gb|EEV50363.1| penicillin-binding protein PBP5 [Enterococcus faecium 1,141,733]
Length = 678
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I++ + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIVAASGGYFYYRHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLD 70
NK
Sbjct: 62 NKAA 65
>gi|218528780|ref|YP_002419596.1| HemY domain protein [Methylobacterium chloromethanicum CM4]
gi|218521083|gb|ACK81668.1| HemY domain protein [Methylobacterium chloromethanicum CM4]
Length = 511
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 52/163 (31%), Gaps = 11/163 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A + + + D A K + L + + +L + D + AA+I
Sbjct: 231 LTAAAQRHEAGEPDTATEQALKAVKLAPDLVP--AAVIAGRLLARRNDLRKAAKIIEAAW 288
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQFANEILGISALKF 175
P L + + T + + L++ + + ++ +A +
Sbjct: 289 KATPHPE-------LAKVYLNLRTGDSARDRLARAENLAK-LSSWEPESRLVIAQAATEA 340
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
+A+ L D + +++ A A R+++
Sbjct: 341 KDFGRAREALAPLTDDRPTARVCRMMARIEAAEHGAESGRSRE 383
>gi|307635128|gb|ADI85775.2| multiple glycosyl transferase domain and TPR domain protein
[Geobacter sulfurreducens KN400]
Length = 2597
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 49/146 (33%), Gaps = 16/146 (10%)
Query: 48 KKKNIVGENFAQALE-----LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ G+ + AL L +LD+A + + + + D + + + + + + +
Sbjct: 2406 SRAAEAGD--SSALADMGDCLAQLGRLDEATARY--LEALDADGTDLKALVGLGVVSLVQ 2461
Query: 103 GDTKNAAEIFLKVANDDLAPL-AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
G A F + D A A+ ++ D + + + ++P
Sbjct: 2462 GKQVKAVTWFNRALKADPANAKALCGLGMVRNMQNKHDEAF--SLLAR----AVDADPEG 2515
Query: 162 QFANEILGISALKFGKVQKAKTIFEE 187
A L + G+ +A +
Sbjct: 2516 LTALHELIRLSYATGRFDEAGERLDR 2541
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+G ++ E +A L K ++A ++F + + L++M L
Sbjct: 2374 EGRDQEPGERATEA--EARRLKEDGKYEEALAAFSRAAEAGDSS--ALADM--GDCLAQL 2427
Query: 103 GDTKNAAEIFLKVANDDLAP 122
G A +L+ + D
Sbjct: 2428 GRLDEATARYLEALDADGTD 2447
>gi|297566934|ref|YP_003685906.1| SARP family transcriptional regulator [Meiothermus silvanus DSM
9946]
gi|296851383|gb|ADH64398.1| transcriptional regulator, SARP family [Meiothermus silvanus DSM
9946]
Length = 992
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE----ISKILQKLSEPS 157
+G +F +R A +++ +L E + + L++ +
Sbjct: 627 RGWFAEGIAVFET--AISSPDPLLRSLALVRSGRLLYRLGRPGEARRYLEQALEQGAGHI 684
Query: 158 NPM-HQFANEILGISALKFGKVQKAKTIFEE 187
+ FA LG++ + G +A+ +F+E
Sbjct: 685 DEYERAFALNNLGLTRMGMGDFAEARQLFQE 715
>gi|304386492|ref|ZP_07368780.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC
13091]
gi|304339321|gb|EFM05393.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC
13091]
Length = 488
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFEDR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|302552683|ref|ZP_07305025.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
gi|302470301|gb|EFL33394.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
Length = 310
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 15/156 (9%)
Query: 12 GKCKMGKCCYKWIAPLL-ILMILSLAIWFYLFDGSHEKK--KNIVGENFAQALELFNSNK 68
G+ + + IA L + + +L + L + ++ GE A + F+ K
Sbjct: 139 GRKGRARSGRRRIAVLGTVFTVAALGLGSVLLSSLDDGNPPRDRAGEQQTTAADTFSEGK 198
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
L + + S + + +V ++ P VR
Sbjct: 199 LQKQVTDLLAENKSEGGG----SRTPLGAETAGTNHP--------RVFSEPSVPGCVRDG 246
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFA 164
+ A++ V+ YE +L L + S+ A
Sbjct: 247 IGRKEAALAVENGRYEGKKAMLVLLPDASDATRVTA 282
>gi|159904280|ref|YP_001551624.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
9211]
gi|159889456|gb|ABX09670.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
9211]
Length = 270
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 7/115 (6%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
K D+A +E IL+++ L+ +AS ++GD A E F K AN +
Sbjct: 121 GKWDEAVKDYELILAREPNN--SLALFNLASAKGSQGDWLQAEEFFDKAANVQPGFV--- 175
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A + A ++++ L+ + PM + L K G V +A
Sbjct: 176 -LARISKALANYQLKNFDQAESDLRAIIR-KYPMFPDSRAALTALLWKRGLVGEA 228
>gi|330504677|ref|YP_004381546.1| hypothetical protein MDS_3763 [Pseudomonas mendocina NK-01]
gi|328918963|gb|AEB59794.1| hypothetical protein MDS_3763 [Pseudomonas mendocina NK-01]
Length = 212
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 5/190 (2%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-D 83
L ++ + W D + + + AL+ K+ S+
Sbjct: 26 GVLALVAVFGWQGWQKYQDNQAQGASVLYQQLLETALDPAGKPDAAKVAELAGKLDSEFG 85
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSY 143
Y ++++A + V +AA +V D A + A + A +L
Sbjct: 86 GSHYAQYGSLFVAKVAVEANRLDDAAAALQRVL-DKPADATLGELARQRLARVLAAQDKA 144
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
++ K+L ++ + E+ G ++ G+ A +++ AKD + Q
Sbjct: 145 DDALKLLD--TKVEDAYLASREELKGDLLVQLGRSDDAHAAYQK-AKDALAEDAAVGGLQ 201
Query: 204 MILANIIASD 213
M L ++ D
Sbjct: 202 MKLDDLAKGD 211
>gi|325143066|gb|EGC65416.1| tetratricopeptide repeat protein [Neisseria meningitidis 961-5945]
gi|325208858|gb|ADZ04310.1| tetratricopeptide repeat protein [Neisseria meningitidis NZ-05/33]
Length = 488
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFEDR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|284051331|ref|ZP_06381541.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
Length = 526
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F A +L +LD+A +S+ + +++ + N+ A L +G A + +
Sbjct: 6 FDTANQLLRKGQLDEAIASYNQAIAESPQSAWYYHNLGEA--LSQQGKIDEAIAAYRQAT 63
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEIS--KILQKLSEPSNPMHQFANEILGISAL 173
+ + + TL + + E +S + +L + + L + +
Sbjct: 64 ELNPNSAWSYDNLGTL----LNQQGNLPEAVSCFRKAIELDPDFSEFYHN----LALVLI 115
Query: 174 KFGKVQKAKTIFEE 187
K G++++A ++ ++
Sbjct: 116 KEGRLEEAVSLLQK 129
>gi|227494206|ref|ZP_03924522.1| possible non-specific serine/threonine protein kinase [Actinomyces
coleocanis DSM 15436]
gi|226831940|gb|EEH64323.1| possible non-specific serine/threonine protein kinase [Actinomyces
coleocanis DSM 15436]
Length = 611
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 55/171 (32%), Gaps = 28/171 (16%)
Query: 11 KGKCKMGKC-CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKL 69
+ + K + W+ + ++L+ L+ N E + +
Sbjct: 334 RVGAEKKKSNLWLWLTLAFVTIVLAGVG---LWWALGSSAANKPTEELVEVPAGIINVDF 390
Query: 70 DDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
DAR + K + + AS V +G ++ D V+ +
Sbjct: 391 ADARRALAKAGLEGVQGEKV------ASDDVEEGKV---------ISADPEPGTKVKKKS 435
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
+ + + + + ++ +S+ A E+L LK G+V +
Sbjct: 436 KVH---LQISSGPASLVVPNIKGMSQDQ------AREVLKSVGLKIGEVDR 477
>gi|311105361|ref|YP_003978214.1| transmembrane protein 1 [Achromobacter xylosoxidans A8]
gi|310760050|gb|ADP15499.1| transmembrane protein 1 [Achromobacter xylosoxidans A8]
Length = 212
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 73/212 (34%), Gaps = 13/212 (6%)
Query: 9 SYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK 68
+ K K + L++ ++ ++A+ + + G + + + L ++ +
Sbjct: 6 EEQEKLDAIKAWWARYGTLVVTLVAAVALAWGGWWGWKAYQSHRANQAMGYFEALEDAAR 65
Query: 69 LDDAR-------SSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L A ++ + Y + A L A+ D A E +A
Sbjct: 66 LGGADSSVRIKTAAATLREQYPSTGYATRGALVAAQALQAQKDDAGAREQLEWLAAQGKN 125
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQK 180
P ++ A L+ A +++D Y+ L + +IL GK ++
Sbjct: 126 PS-MQAVARLRLAGMMLDQKQYDAALAQLNNPPAAFAALFADRRGDILAA----QGKREE 180
Query: 181 AKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
A+ ++ + ++ Q+ L + +
Sbjct: 181 ARAAWQSAIDGLGTANPLTQVVQLKLDALSGA 212
>gi|118395268|ref|XP_001029986.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89284269|gb|EAR82323.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 461
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 28/56 (50%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
F +A L NKLD+A+ EK L D +PL I I + KGD A EIF
Sbjct: 281 FYEAKMLQVQNKLDEAQKLLEKCLEFDVANLSPLVYNQIGVIYLQKGDIAKAQEIF 336
>gi|257895869|ref|ZP_05675522.1| penicillin-binding protein PBP5 [Enterococcus faecium Com12]
gi|293377092|ref|ZP_06623302.1| penicillin-binding protein, transpeptidase domain protein
[Enterococcus faecium PC4.1]
gi|257832434|gb|EEV58855.1| penicillin-binding protein PBP5 [Enterococcus faecium Com12]
gi|292644308|gb|EFF62408.1| penicillin-binding protein, transpeptidase domain protein
[Enterococcus faecium PC4.1]
Length = 678
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I++ + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIVAASGGYFYYRHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLD 70
NK
Sbjct: 62 NKAA 65
>gi|307823421|ref|ZP_07653650.1| Tetratricopeptide TPR_2 repeat protein [Methylobacter tundripaludum
SV96]
gi|307735406|gb|EFO06254.1| Tetratricopeptide TPR_2 repeat protein [Methylobacter tundripaludum
SV96]
Length = 581
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 59/155 (38%), Gaps = 8/155 (5%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E+ K+ + + E+ + + + + A + +G A E +++ A
Sbjct: 30 EVVEPVKIAEPKKKTEQSEVKTAIDPDVMYMLMAAELAGQRGQYAIALEGYMEAAKRVSD 89
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P AA + A + D++ +E L +P + A +I +SAL+ G Q A
Sbjct: 90 PRFAERAAKI--AMYMRDSNKTDEAIS----LWLKQDPNNPTARKIAALSALRAGNKQAA 143
Query: 182 KTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+ K + P G + + + + + +
Sbjct: 144 VDHLSAVLKTD--PAGFEKSALELASVLQRDGKSD 176
>gi|317153857|ref|YP_004121905.1| tetratricopeptide domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944108|gb|ADU63159.1| tetratricopeptide domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 1061
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 10/144 (6%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQ--DNKLYNPLSNMYIASILVAKGDTKN----AA 109
+AQA+ L N D A + + + + + + Y+A + + D + A
Sbjct: 887 EYAQAMSLQNLGNADKALAMWADLAKDVKVDPAFRAYAMYYMAKSAMDQQDLRRVFVYAQ 946
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK---ILQKLSEPSNPMHQFANE 166
E + P ++ A L + + YEE K + + NP
Sbjct: 947 EALSLLLQTKGDPEKIKD-AVLMSIYATERSGRYEEALKWAREYDRYIDVDNPEWASTRF 1005
Query: 167 ILGISALKFGKVQKAKTIFEELAK 190
L K G +++ K + ++ +
Sbjct: 1006 KLARIYRKAGAIEEWKQLLGDIIE 1029
>gi|237739469|ref|ZP_04569950.1| tetratricopeptide repeat family protein [Fusobacterium sp. 2_1_31]
gi|229423077|gb|EEO38124.1| tetratricopeptide repeat family protein [Fusobacterium sp. 2_1_31]
Length = 936
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 15/135 (11%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + K D+ + ++ Y + A F KV +
Sbjct: 483 SLLDQQKYDEMNQYLSSVSDDNSLSY------LKGVAAMGLKKYDEAETHFQKVLANGDK 536
Query: 122 PLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN--EIL---GISALKF 175
L+ + Y ++ + Y E + ++ NP + A E+L G+S +
Sbjct: 537 GLSTKVYLNRVRNFFL---AERYNEAIQAGEQYLSRINPDKEKAIYSEMLDKIGLSYFRV 593
Query: 176 GKVQKAKTIFEELAK 190
GK +A++ + ++A
Sbjct: 594 GKYDQARSYYSKIAS 608
>gi|221633509|ref|YP_002522734.1| putative soluble lytic murein transglycosylase [Thermomicrobium
roseum DSM 5159]
gi|221155551|gb|ACM04678.1| probable soluble lytic murein transglycosylase precursor
[Thermomicrobium roseum DSM 5159]
Length = 748
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 2/135 (1%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+A LF++ + +A ++F +L+ D + A V GD E +A+
Sbjct: 299 RAAILFSAGRYREAVTAFTALLASDPT--RAEAWYQRAIARVRAGDLAAGIEELTAMADR 356
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
A A + E+ P + A LG+ A G
Sbjct: 357 YPQDARAPDALVTAAMLLEWRNEPAAEVLYRRVLSQYPETVAARQARFRLGLLAFARGAH 416
Query: 179 QKAKTIFEELAKDNN 193
+A+ ++ A+ +
Sbjct: 417 DEARDLWRADAEAGD 431
>gi|34495636|ref|NP_899851.1| response regulator [Chromobacterium violaceum ATCC 12472]
gi|34101491|gb|AAQ57860.1| probable response regulator [Chromobacterium violaceum ATCC 12472]
Length = 516
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
A L N + +A S ++++L+Q ++ + M +A I+ +G+T+ + + ++
Sbjct: 150 LAAELLVNEGRQGEALSIYQELLTQ--RVIPW-AKMGVARIVAEQGETQESNALLREIIA 206
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
D A L+D Y+ + +L+K + +P + + G + L+ G
Sbjct: 207 DAPRYTDAYDL----LAQNLIDDGQYQTAAVVLEK-AVAISPRNFNRLKSCGTALLRCGD 261
Query: 178 VQKAKTIFEELAK 190
KA + +
Sbjct: 262 PSKAADYLQRAVE 274
>gi|323489123|ref|ZP_08094357.1| Tetratricopeptide repeat protein [Planococcus donghaensis MPA1U2]
gi|323397246|gb|EGA90058.1| Tetratricopeptide repeat protein [Planococcus donghaensis MPA1U2]
Length = 1382
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 51/137 (37%), Gaps = 11/137 (8%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LK 114
A + + + A E + +++ + A+I +++ + + A
Sbjct: 524 ALLAAHMHYRKEETEQALKCLEGVKEKNSP----YALFLKAAIYMSQSEHEKAVPFLKRS 579
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+ D P+A + A + +D +Y+ ++ P FA + +
Sbjct: 580 IELDHYQPMAYSHLAR---CYLEIDK-TYQAFK--WSSIALEQEPTDVFARITHSLIQYE 633
Query: 175 FGKVQKAKTIFEELAKD 191
G ++A T F EL+++
Sbjct: 634 SGAYEQALTRFRELSQE 650
>gi|118594980|ref|ZP_01552327.1| hypothetical protein MB2181_04890 [Methylophilales bacterium
HTCC2181]
gi|118440758|gb|EAV47385.1| hypothetical protein MB2181_04890 [Methylophilales bacterium
HTCC2181]
Length = 208
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 12/216 (5%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
++ K K YK IA ++I + L L I K + + + +
Sbjct: 3 LDMEEQDQEENLKNLWSK--YKNIAFIVIGIFLCLYIAATFISNKKNKANELASQLYQEV 60
Query: 61 LELFNSNKLDDARSSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
L D ++ +D+ Y +++++ + GD + A +
Sbjct: 61 --LMEKIDNLDQIKVKTDLVKKDHTNTPYAGRASLHLGQLYAKTGDYDKSIPEL-SWAGE 117
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
+ L+++ A A + + + + ++ P +++LG AL G
Sbjct: 118 NATELSIQSLAHYALAYMYIAKKDTSKAKLAAEAIATPG--YIGLKSDLLGDIALMDGDH 175
Query: 179 QKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQ 214
+ A++ F + + S +Q+I + A Q
Sbjct: 176 EAARSFFNQ---ALDFYKNKSELAQVIQTKLDAIGQ 208
>gi|330505159|ref|YP_004382028.1| thioredoxin [Pseudomonas mendocina NK-01]
gi|328919445|gb|AEB60276.1| thioredoxin [Pseudomonas mendocina NK-01]
Length = 290
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 2/119 (1%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A LF + + + +++L++DN+ L + A L +G+ A + V
Sbjct: 124 MESAQALFAEGRFAETEALLKQVLTEDNENAAAL--ILYARCLAERGELGEAEVVLDAVK 181
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D+ A L D + L + +E ++Q A + L +
Sbjct: 182 GDEHKQALAGAKAQLTFLRQAADLPDAATLKSRLAQNAEDDEAVYQLAVQQLARQQYEA 240
>gi|307352488|ref|YP_003893539.1| tetratricopeptide repeat-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307155721|gb|ADN35101.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius
DSM 11571]
Length = 1098
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 16/118 (13%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ G+ + +A SS+E+ + D + A IL A G+ A E
Sbjct: 660 SGQGDAYLA------LGMSGEALSSYER--AIDAGGNILGALKGRAEILAASGNPAEAVE 711
Query: 111 IFLKVANDDLAP-LAVRYAATLQAASILVDTSSYEEISKILQK--LSEPSNPMHQFAN 165
+ V + +R A L D + + +++P N
Sbjct: 712 AYNSVLEINPMDTDVLRKLAALYE-----DAGHPGQALTAYDRILIADPENSYAISGR 764
>gi|23014386|ref|ZP_00054205.1| COG0535: Predicted Fe-S oxidoreductases [Magnetospirillum
magnetotacticum MS-1]
Length = 449
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A+A+ L LD+A ++ EK + + + A +L+A+ A +F +V
Sbjct: 30 LAEAMRLAEGQLLDEAIAALEK--ADGH----VECDYRRAGLLLARQRAPEAETLFRRVL 83
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
P + L A LV E +L+ ++ P + +LGI+ + G
Sbjct: 84 --TAIPGHLDTMVGL--AGALVAQGRAAESLALLEPAAQ-IQPQSGRIHYLLGIALEEAG 138
Query: 177 KVQKA 181
+ Q A
Sbjct: 139 RSQAA 143
>gi|149920015|ref|ZP_01908489.1| hypothetical protein PPSIR1_14960 [Plesiocystis pacifica SIR-1]
gi|149819112|gb|EDM78548.1| hypothetical protein PPSIR1_14960 [Plesiocystis pacifica SIR-1]
Length = 686
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
++A + Q N L+ + S+L+ K D A + + P A
Sbjct: 353 GDTENALKVAQHAAEQGNDGPPVLALL--GSLLIEKDDFDAAEPFLRRAVEEGKIPSAYG 410
Query: 127 YAATLQAASILVDTSSYEEISKILQKL-----SEPSNPMHQFANEILGISALKFGKVQKA 181
A + D + E+ + + + N + + A E+L A++ KA
Sbjct: 411 DLANVL--WDRSDDDTDEQKEDREEAMTLLATAVGLNHVAKSAIEMLLDLAMEEED-DKA 467
Query: 182 KTIF 185
+
Sbjct: 468 TELL 471
>gi|126668582|ref|ZP_01739536.1| hypothetical protein MELB17_11353 [Marinobacter sp. ELB17]
gi|126626987|gb|EAZ97630.1| hypothetical protein MELB17_11353 [Marinobacter sp. ELB17]
Length = 217
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 62/190 (32%), Gaps = 13/190 (6%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + + K +K L++ I + + + ++ E +Q + L N
Sbjct: 3 ELRTDEEQVEAIKQWWKNNGSSLLIGIGAALAIVFGWQAWQNQQAEQRTEAASQFVTLMN 62
Query: 66 SNKLDD----------ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+ +D A++ ++ +Y L M L+ D + A E
Sbjct: 63 AFGTEDETSADTIAFVAKTLRDEHADSAYAVYANL--MLARVQLMQNNDAEGAVESLQWA 120
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ + + + A + Y+ + ++ S+ E+ G L
Sbjct: 121 LDKAVETQPLALVVRSRLAQAQMALEDYDAALATIDG-AKDSDAFGARFAELRGDILLAK 179
Query: 176 GKVQKAKTIF 185
G A+ +
Sbjct: 180 GDQDGARDAY 189
>gi|28378521|ref|NP_785413.1| hypothetical protein lp_1866 [Lactobacillus plantarum WCFS1]
gi|28271357|emb|CAD64262.1| unknown [Lactobacillus plantarum WCFS1]
Length = 214
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 2 ESNNDANSYKGKCKMGKC-CYKWIAPLLILMILSLAIW---FYLFDGSHEKKKNIVGENF 57
+ N A++ K G +KW+A +LI +I+ + L S
Sbjct: 5 QRNKQASASKNPKTNGPINVWKWVAVVLIALIVGTGAYVGTQVLRSPSESTSLTAASNTD 64
Query: 58 AQALELFNSNKLDDARSS--FEKILSQDNKLYNPLSNMYIASIL 99
A ++ + + K +A +S + + Y + A +L
Sbjct: 65 AASVPITMNRKQLNALASYYLNDLQKGQDMKYRFVVRSTGAYLL 108
>gi|332880658|ref|ZP_08448332.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332681646|gb|EGJ54569.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 1114
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 48/151 (31%), Gaps = 22/151 (14%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
AL+ + D+A + E + + +Y + + + KGDT A E + K
Sbjct: 684 IEYALDFAQAGLYDEAINLLEGYAATQSSVYPMV-HYALGYCHSRKGDTVKALEYYKKAE 742
Query: 117 NDDLA---PLAVRYA------------ATLQAASILVD----TSSYEEISKILQKLSEPS 157
DD + P + A +AA L + Y+ + +
Sbjct: 743 QDDHSYCFPNRIEEVLVLQDAMKENHEACAKAAYALGNFWYAARQYDNAIACWEASAAID 802
Query: 158 NPMHQFANEILGISAL-KFGKVQKAKTIFEE 187
L ++ K QKA E+
Sbjct: 803 PAFPTVWRN-LSLAYYNKRNDSQKAVETLEK 832
>gi|172035397|ref|YP_001801898.1| hypothetical protein cce_0481 [Cyanothece sp. ATCC 51142]
gi|171696851|gb|ACB49832.1| unknown [Cyanothece sp. ATCC 51142]
Length = 252
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 12/157 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E Q +E + A F ++L+Q+ + N + + G + A F K
Sbjct: 65 EMVQQGIEKSRQGNYEAAVDDFNQVLAQNPQDIN--AYFNRGFAYSSLGQFEQALADFTK 122
Query: 115 VANDDLAPLAVRYAATLQAASILV--DTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
V L P V+ + + D + + K L+ NP FA LG++
Sbjct: 123 VLK--LDPQMVQAYVNRGNVYLQLGEDEKAISDYEKALK-----INPNDAFAQNNLGLAH 175
Query: 173 LKFGKVQKAKTIF-EELAKDNNSPFGISTRSQMILAN 208
L G + AK F + + D R +L
Sbjct: 176 LNSGSPELAKIDFTQAVTIDPLYGEAYYNRGLALLDL 212
Score = 35.3 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F + + + + A + F K+L D ++ + + ++ + G+ + A + K
Sbjct: 101 FNRGFAYSSLGQFEQALADFTKVLKLDPQM--VQAYVNRGNVYLQLGEDEKAISDYEKAL 158
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ A +++ S E ++KI + +P++ A G++ L G
Sbjct: 159 KINPNDA----FAQNNLGLAHLNSGSPE-LAKIDFTQAVTIDPLYGEAYYNRGLALLDLG 213
Query: 177 KVQKAKTIFEELAK 190
+ +KA F++ A+
Sbjct: 214 ETKKAIADFQKAAE 227
>gi|260431926|ref|ZP_05785897.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415754|gb|EEX09013.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 506
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 7/170 (4%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
++ + A L S + A + K NK L+N+ +A G
Sbjct: 86 YFDRSREQRGYQALADGLMALASGEGRIALTKARKAEKLLNK--PELTNLLVAQAAEMTG 143
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
DTK AAE + K+ +D ++ E+ ++ L + + P H+
Sbjct: 144 DTKKAAETYKKLVSDPAT-----RFVGVRGILKQKLAEGDEDTARKLAEKALQLKPRHEE 198
Query: 164 ANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
++L K A++ K P + R +LA A D
Sbjct: 199 TQDVLLKLQTKAQDWAGARSTLTAKLKAGYLPRDVYRRRDAVLALSEAKD 248
>gi|119896706|ref|YP_931919.1| hypothetical protein azo0415 [Azoarcus sp. BH72]
gi|119669119|emb|CAL93032.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 239
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAE 110
+ AL L K DA ++FE L++ + P ++ + + + + +A
Sbjct: 118 AESTEYEAALNLLKGGKHRDALTAFEAFLARHPAGSFAPSAHFWAGNAALQAKEVASATT 177
Query: 111 IFLKVA----NDDLAPLAVRYAATLQAAS 135
F V ND +AP A+ A Q A
Sbjct: 178 HFNAVLGKWPNDSVAPDAMLGLANSQQAM 206
>gi|329902497|ref|ZP_08273127.1| TPR repeat-containing protein [Oxalobacteraceae bacterium IMCC9480]
gi|327548758|gb|EGF33396.1| TPR repeat-containing protein [Oxalobacteraceae bacterium IMCC9480]
Length = 325
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 8/172 (4%)
Query: 30 LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSF---EKILSQDNKL 86
L +L +AI F + E + +G+ QA ++ + + +A + ++I +++
Sbjct: 17 LAVLLIAIGFTPLSQAQETVRAELGKPLQQAQDMMRAQRYKEALAKVRDADRIGAKNPAE 76
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS-SYEE 145
L M A+ GD AA+ + N P +QA +IL + Y +
Sbjct: 77 QLMLDRMRGAA-AQGAGDNATAAKSYEAAINSGKMPAGD-NVKLMQALAILYYRAQDYAK 134
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPF 196
+Q+ + +L + KA+ + +A D +
Sbjct: 135 SQVWIQRYIKEGGT-DSQVRGLLAQTYFLNNDFAKAQKELQATIAADEKAGR 185
>gi|294852350|ref|ZP_06793023.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella sp. NVSL
07-0026]
gi|294820939|gb|EFG37938.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella sp. NVSL
07-0026]
Length = 276
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 13/92 (14%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDN----KLYNPLSNMYIASILVAKGDT 105
+ + E + AL L + D A ++E++L D L++M ++ + D
Sbjct: 11 QEALAEAYNHALALEKAGDFDAAAKAYEEVLQIDPDDHGGAAVRLASMGRGAVPLKAPDA 70
Query: 106 KNA------AEIFLKVANDD---LAPLAVRYA 128
A AE+F + D PL +R
Sbjct: 71 YVATLFDQHAEMFDTILVDQLGYDVPLQLREM 102
>gi|269791733|ref|YP_003316637.1| hypothetical protein Taci_0115 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099368|gb|ACZ18355.1| Tetratricopeptide domain protein [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 409
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 71/196 (36%), Gaps = 21/196 (10%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+ L++LM W++ ++ F +A +L+ + + +A ++++
Sbjct: 31 LIGLVMLMAFLGGGWWHYRTKVLPERL------FMEAEDLYRAGRYAEALPVYQRVYQLR 84
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAATLQAASILVDTSS 142
+ + + IA G +A + F + D P + L IL+
Sbjct: 85 PVRKDVV--LRIALCQERLGRLNDAMDSFDLQSRLDPKDPRPL-----LGKGRILLSLGR 137
Query: 143 YEEI---SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
EE K QKLS S+P +N +L + + G A + A+ + P +
Sbjct: 138 PEEALGPLKRAQKLSS-SSPY---SNRLLAEAYRRVGSHDMAIKHLKLSAERDRDPERVL 193
Query: 200 TRSQMILANIIASDQR 215
++ + R
Sbjct: 194 MDAKDLFQLKDFEGAR 209
>gi|218258465|ref|ZP_03474832.1| hypothetical protein PRABACTJOHN_00487 [Parabacteroides johnsonii
DSM 18315]
gi|218225437|gb|EEC98087.1| hypothetical protein PRABACTJOHN_00487 [Parabacteroides johnsonii
DSM 18315]
Length = 577
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 51 NIVGENFAQALELF----NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+NF L L N +A +EK++ D L N Y+A L +G+
Sbjct: 98 AYSSDNFTYRLALATMSRNLGMFGEAAEEYEKLVK-DYPGKPEL-NYYLADALTQEGEIG 155
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A + + + + A+ + + L E K ++KL+ PM
Sbjct: 156 KAIDAYDALESSIGMNEAL-SMQKYKLYNAL---EQTENAFKEVEKLA-DKFPMESRYQI 210
Query: 167 ILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQ 203
ILG L+ KA +++ + D SP+ I + +
Sbjct: 211 ILGDLHLEKNDTVKALKYYQKAHEIDPGSPYYIVSMAN 248
>gi|195488840|ref|XP_002092483.1| GE14218 [Drosophila yakuba]
gi|194178584|gb|EDW92195.1| GE14218 [Drosophila yakuba]
Length = 869
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
QA L N+ ++A S+EK++ Y+ + ++++L +G + A + +
Sbjct: 445 QAECLRQLNRTNEAIQSYEKVVQLAPFCYD--ARFTLSALLKQQGRHEEAVQALEQPGET 502
Query: 119 DLAPLAVR 126
+ PL R
Sbjct: 503 EGQPLIAR 510
>gi|294507597|ref|YP_003571655.1| hypothetical protein SRM_01782 [Salinibacter ruber M8]
gi|294343925|emb|CBH24703.1| putative TPR-repeat protein [Salinibacter ruber M8]
Length = 1064
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 10/171 (5%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI- 79
++ L +L +L+ +++ + F A+EL+ DA ++F
Sbjct: 66 WRRFLLLCVLAGTALS------PARAQQEAPRPADAFGGAVELYQQQLYPDAATAFATFR 119
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ + + P + A +A+GD + ++ + + R A L A +D
Sbjct: 120 QAHASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRAR-TARLGLAQYYLD 178
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANE--ILGISALKFGKVQKAKTIFEEL 188
+ + LQ ++ + + A +LG + G A F+++
Sbjct: 179 QGNPDRAKSQLQTIATAPSRPDEGARALYLLGRTEQNQGNPNAALPYFKQV 229
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 14/149 (9%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL------YNPLSNMYIASILVAKGD 104
G +A A F + + A SF + L ++ Y + + +A A
Sbjct: 569 QRAGARYALAWTYFKQRRFEPAARSFRRFLDVYDRDSMSDVPYRQDARLRLADCYFALKR 628
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQ 162
+A + +V D A + A Q L L++ + P +P+
Sbjct: 629 YDDARAAYDRV---DGAGVEY---ALYQGGRALYYAGQPGAARDRLRRFVDDFPDSPLRP 682
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD 191
A LG + + + A+ F +L D
Sbjct: 683 DALYRLGDIHFQEQRYEAARDAFTQLLDD 711
>gi|198417618|ref|XP_002119219.1| PREDICTED: similar to aspartyl(asparaginyl)beta-hydroxylase; HAAH,
partial [Ciona intestinalis]
Length = 471
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 28/151 (18%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA------- 108
+A +L S + A++++++++S + + P++ A L + + + +
Sbjct: 55 QLKEAEKLLKSKQAAKAKAAYQRLISSNPES--PMARFGKAESLFQQAEQERSNKLLQEC 112
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE-- 166
+ + +VA P A++ A L + E L L Q A E
Sbjct: 113 IQAYNEVAELPTCPPALKKKALL----------TKAERQTFLGHLRAALLTKTQLAREFP 162
Query: 167 -------ILGISALKFGKVQKAKTIFEELAK 190
LG++ L G+ KAK +FE++
Sbjct: 163 NDGKVLNQLGVAYLMIGQNDKAKQVFEKVLD 193
>gi|254433450|ref|ZP_05046958.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
oceani AFC27]
gi|207089783|gb|EDZ67054.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
oceani AFC27]
Length = 253
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 18/190 (9%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHE----KKKNIVGENFAQALELFNSNKLDDARSSFEKI 79
I I+++ L + K+ N +E F +L+ A E+
Sbjct: 2 IGVFAIMLLGFAGCASILSSQEQDIPSIDKEKAAKINVQLGVEYFKQGELEQALKKLERA 61
Query: 80 LSQDNK---LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASI 136
+ QD K YN L+ + G + A + F + A
Sbjct: 62 IQQDPKLPSAYNALALLKQ-----RLGQAEEAEKYFQRAIK---LDPEYSE-AQNNYGVF 112
Query: 137 LVDTSSYEEISKI-LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNNS 194
L + Y + L+ + P + A E G++A K + KA+ + + L +
Sbjct: 113 LYNQGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKQVEFDKAERYYRKALQLEPRL 172
Query: 195 PFGISTRSQM 204
P + +++
Sbjct: 173 PKSLYHMAEI 182
>gi|329930344|ref|ZP_08283933.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
gi|328935070|gb|EGG31556.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
Length = 560
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 134 ASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
A L++ + + K+L+++ + NP A L ++ G+ AK E+
Sbjct: 143 ARALLEEGKFAQAVKLLEEIVKD-NPDFLAARNNLALAYYYMGRFDTAKRTIGEVLD 198
>gi|312962903|ref|ZP_07777390.1| hypothetical protein PFWH6_4826 [Pseudomonas fluorescens WH6]
gi|311282930|gb|EFQ61524.1| hypothetical protein PFWH6_4826 [Pseudomonas fluorescens WH6]
Length = 213
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 9/144 (6%)
Query: 30 LMILSLAIWFYLFDGSHEKKKNIVGENFAQALE--LFNSNKLDDARSSF--EKILSQ-DN 84
L+ L + + + + + Q LE L K D A+ ++ ++
Sbjct: 28 LLALVVVFGWQAWHKYQANQSQGASVLYQQLLESTLTPDGKPDAAKVAYLAGELKKDFGG 87
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y ++++A + V G +A+ + D + A + A +L ++
Sbjct: 88 STYAQYGSLFVAKVAVDSGKLDDASVELKAIV-DKPTNPTLGEIARQRLAQVL---AAQS 143
Query: 145 EISKILQKLSEPSNPMHQFANEIL 168
+ + L+ L ++ E L
Sbjct: 144 KADEALKLLDGDADKAFVATREEL 167
>gi|288555804|ref|YP_003427739.1| rhomboid protein membrane-associated serine peptidase [Bacillus
pseudofirmus OF4]
gi|288546964|gb|ADC50847.1| rhomboid protein, putative membrane-associated serine peptidase
[Bacillus pseudofirmus OF4]
Length = 512
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
L ++ +A + +G A + V ++ A A + + YE+ +
Sbjct: 398 SLLSLQLAQEYMQEGRFDEAYPLIETVLEEENDNPE----AYFLMAYLEYEFGQYEKARE 453
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNN 193
L K + P A+ L ++ + G ++A EE +A
Sbjct: 454 SLLK-TVELRPSFHEAHYNLALTHSRLGNTEEAIASLEEAIALAPE 498
>gi|255034847|ref|YP_003085468.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254947603|gb|ACT92303.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
18053]
Length = 352
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLK 114
+A N +L+DA++ E+I + Y + + ++L A+G++ A + +
Sbjct: 109 LVRAEASLNLGRLNDAKADLEQIEKE----YKDSTRFHLVKGNLLDAQGNSSQAIPEYDR 164
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+ A + ++ SY E + + +P A LG+ A +
Sbjct: 165 ALQLSKTNIE----AYVNRGAVYYRMGSYTEARLDFET-AVALDPAQPQALNNLGLIASR 219
Query: 175 FGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILA 207
+ Q+A F++ L++D + P+ ++ + +L
Sbjct: 220 NHQWQQAIAYFDQVLSRDPSEPYSLNNKGYALLQ 253
>gi|254486544|ref|ZP_05099749.1| thioredoxin [Roseobacter sp. GAI101]
gi|214043413|gb|EEB84051.1| thioredoxin [Roseobacter sp. GAI101]
Length = 304
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 6/139 (4%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
E + E A A E+ + DA +F IL +D M A I + + D
Sbjct: 126 EAPGETLNEAVAVAEEMLTDGAVQDALDTFSAILGEDPNHAAAYGGMVRAYIALDQLDAA 185
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
+ +P A LQ A + E+ + +NP A
Sbjct: 186 EG-HLNGAPIEISKSPELEAAHAQLQLARQAANAGPVAELQA-----AVDANPDDSQARF 239
Query: 167 ILGISALKFGKVQKAKTIF 185
L ++ G Q A
Sbjct: 240 DLALALQASGDTQGAVDQL 258
>gi|83814061|ref|YP_446792.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
Length = 554
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 51/138 (36%), Gaps = 7/138 (5%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
G+ A F +++ A ++++ Y + M +L G + A E +
Sbjct: 122 SGDLEEIASFYFEEGEMETALEVIDRLIELHP--YTSDAWMRRGILLNNLGRPEEALEAY 179
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
+ + + TL I +D+ + + + NP+H A LG++
Sbjct: 180 EQALDVNPT-----DTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTL 234
Query: 173 LKFGKVQKAKTIFEELAK 190
+ +++ A F+ A
Sbjct: 235 ERDEQLEAAVEAFQRCAD 252
>gi|111219964|ref|YP_710758.1| putative ATP/GTP binding protein [Frankia alni ACN14a]
gi|111147496|emb|CAJ59147.1| Putative ATP/GTP binding protein (partial match) [Frankia alni
ACN14a]
Length = 1212
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 17/151 (11%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYN------PLSNMYIASILVAKGDTKNAAEIFL 113
A+ + +A S E++++ +L+ + +A+ G T A +
Sbjct: 954 AVSYGQVGRTVEAISIEERVIADSARLFGDEHPATLTARATLAASYRQAGRTVEAISLGE 1013
Query: 114 KVAND------DLAPLAVRYAATLQAASIL----VDTSSYEE-ISKILQKLSEPSNPMHQ 162
+V D P +R A L A+ L V+ S EE + ++L +P
Sbjct: 1014 RVVADCARLFGAEHPTTLRARADLAASYRLAGRTVEAISIEERVIADRERLLGDEHPATL 1073
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNN 193
A L S + G+ +A ++ E +A D
Sbjct: 1074 TARANLAASYGQAGRTAEAISLGERVAADAA 1104
Score = 34.6 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD------NNSPFG 197
E + ++L +P A L +S + G+ +A IFE L D P
Sbjct: 887 ERVVADSERLLGDEHPDTLTARVTLAVSYGQAGRTAEAINIFERLVADCARLLGAEHPDT 946
Query: 198 ISTRSQMILA 207
+ R+ + ++
Sbjct: 947 LRARATLAVS 956
>gi|126460802|ref|YP_001041916.1| alpha-2-macroglobulin domain-containing protein [Rhodobacter
sphaeroides ATCC 17029]
gi|126102466|gb|ABN75144.1| alpha-2-macroglobulin domain protein [Rhodobacter sphaeroides ATCC
17029]
Length = 1808
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 17/162 (10%)
Query: 44 GSHEKKKNIVGE-NFAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVA 101
E + + F +L A+ + + Y ++ A+ A
Sbjct: 103 ARQETARARASDLAFLSDYDLTR------AKEQAAGLGHEHTVNGYTAEEHLQSAARAEA 156
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS------E 155
+GD AA + + A A+ D+SS + + + +
Sbjct: 157 QGDRIAAANFTGAAVSASDRAESWIDYARRLRAAGEADSSSRDTLRDRAFRAAINGYLRA 216
Query: 156 PSNPMHQFANEILGISAL---KFGKVQKAKTIFEELAKDNNS 194
S + A L +SA + + +A + + + +++
Sbjct: 217 GSPALRHTALVELALSAEAIDRGRDMVQALRLAQSIQPRDDT 258
>gi|293604543|ref|ZP_06686948.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817124|gb|EFF76200.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 212
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 63/206 (30%), Gaps = 12/206 (5%)
Query: 12 GKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDD 71
K + + L ++ L+ W+ + + N F + D
Sbjct: 14 IKAWWARYGTL-VVTLFAVVALAWGGWW-GWKAYESHRANQAMGYFEALEDAARLGGADS 71
Query: 72 A----RSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
A ++ Y + A L A+ D A E +A P ++
Sbjct: 72 AVRIKTAAATLREQYPATGYAARGALVAAQALQAQKDDAGAREQLEWLAAQGKNPS-MQS 130
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKTIFE 186
A L+ A +L+D Y+ L + +IL GK +A+ ++
Sbjct: 131 VARLRLAGMLLDQKQYDAALAQLNNPPAAFAALFADRRGDILAA----QGKRDEARAAWQ 186
Query: 187 ELAKDNNSPFGISTRSQMILANIIAS 212
+ ++ Q+ L + +
Sbjct: 187 SAIDGLGTANPLTQVVQLKLDALSGA 212
>gi|284050545|ref|ZP_06380755.1| lytic transglycosylase, catalytic [Arthrospira platensis str.
Paraca]
Length = 172
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN--MYIASILVAK 102
S +N F A +L + + ++A +++ Y L+ + + ++ +
Sbjct: 73 SRTTSENRDRARFLLAADLLEAGQPEEALEQLDRLERS----YRVLAGHILKMRALAYQQ 128
Query: 103 -GDTKNAAEIFLKVANDDLAPLAV 125
GDT A+ + + + V
Sbjct: 129 LGDTAKASLSWKALVDGHPEDPVV 152
>gi|88602286|ref|YP_502464.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88187748|gb|ABD40745.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 614
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ + L S K D+AR F + S+ + + I I + +GD A E F K
Sbjct: 44 YNKGYTLHLSGKFDEARDLFLNLHSRFPEKADVC--FEIGRIALKRGDLSEAEEYFTKC- 100
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISALK 174
+A +R ++ + D+ Y + + + P NP LG+ + K
Sbjct: 101 ---IALEPLRPEPRIELGKMWYDSGYYHKSADSFTEALVFDPDNP---EIRTYLGLISHK 154
Query: 175 FGKVQKAKTIFEE 187
K ++A+ F E
Sbjct: 155 LDKPEEAERWFRE 167
>gi|71408099|ref|XP_806473.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70870233|gb|EAN84622.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 2018
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 15/133 (11%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKV---ANDDLAPLAVRY-----AATLQAASILVDTSS 142
+ + +A + A GDT A E + KV A + R A +A I +D +
Sbjct: 1240 ARIRLARLYTATGDTCEAEEQWAKVSELAKEYEDQEISRETTRNIIAAQRAKGIYMDVLT 1299
Query: 143 YEEISKILQKLS--EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK-----DNNSP 195
+ L + + +FA E L + L+ G+ ++ +EL K
Sbjct: 1300 TAKELDTLASAAEGVDAAADKRFALEALADAHLQLGQYKECINALDELEKVQYKCSEWKG 1359
Query: 196 FGISTRSQMILAN 208
R++ +L +
Sbjct: 1360 TLFRMRARALLGD 1372
>gi|113867240|ref|YP_725729.1| TPR repeat-containing protein [Ralstonia eutropha H16]
gi|113526016|emb|CAJ92361.1| TPR repeat [Ralstonia eutropha H16]
Length = 236
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
++A + N+ + D+A F+++L+ + + + A L G A + F ++A
Sbjct: 65 MSEAQQAANARRYDEAIKGFDRVLAANPRN--AQARFQRAWALAQSGREDAAIQAFAEMA 122
Query: 117 ND-DLAPLAVRYAATLQA 133
+ P A L A
Sbjct: 123 QEFPELPEPHNNLALLYA 140
>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
Length = 353
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 9/128 (7%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDD 119
L L + KL++A ++++K + D Y + + + L +G + A + + D
Sbjct: 136 LALDDQGKLEEAIAAYKKAIELDP-NYAT-AYYNMGNALNRQGKLEEAIAAYKKAIELDP 193
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
A L Y+E +K + NP + FA +G++ K GK
Sbjct: 194 NYSFAYNNM-----GVALRKQGKYDEAIAAYKK-AIEINPNYAFAYNNMGVALRKQGKYD 247
Query: 180 KAKTIFEE 187
+A +++
Sbjct: 248 EAIAAYKK 255
>gi|304383616|ref|ZP_07366075.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304335140|gb|EFM01411.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 588
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 6/93 (6%)
Query: 90 LSNMYIASILVAK--GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
L+ M A + GD+ +F + A A L+AA + V + I
Sbjct: 289 LTLMRQAIAENEQNGGDSTRILSLFKQTL---SAGQPHPDMAELRAAYMAVKHMPQDSID 345
Query: 148 KILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
L ++ +P + + L SALK +
Sbjct: 346 AALHEVLV-LSPENTNSRLQLIQSALKRNDTEG 377
>gi|293570912|ref|ZP_06681957.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E980]
gi|291608975|gb|EFF38252.1| low affinity penicillin-binding protein 5 [Enterococcus faecium
E980]
Length = 678
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIAAAGGGYFYYRHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLD 70
NK
Sbjct: 62 NKAA 65
>gi|78357200|ref|YP_388649.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219605|gb|ABB38954.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 389
Score = 36.9 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 76 FEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135
+ + + + + A + G T A + K A + A ++
Sbjct: 258 LHTLSRTGAQAGSSQTALQTAKLYAEAGRTLQAVALLQKHAGQN---------ALMEQGK 308
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSP 195
IL + + + LQK++ P + Q A L + A + + A++ +++++ SP
Sbjct: 309 ILYNARKFADARTALQKVTAPD--LQQQARFYLALCAWEQQQWSSARSSLQQISR--QSP 364
Query: 196 FGISTR 201
F R
Sbjct: 365 FAAQAR 370
>gi|302539119|ref|ZP_07291461.1| predicted protein [Streptomyces sp. C]
gi|302448014|gb|EFL19830.1| predicted protein [Streptomyces sp. C]
Length = 769
Score = 36.9 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 13/153 (8%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ F+ AL L ++++D+A + + K + S + +L G
Sbjct: 308 HQRAAEAGNSDAMFSLALLLAEADRIDEAETWYRKAADAGDSG----SMHNLGILLANTG 363
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
T A + K A D ++ +L DT E +K ++
Sbjct: 364 RTNEAETWYRK-AADSGNSGSMNDL-----GLLLEDTGRSNEAETWYRKAADAGQ---IN 414
Query: 164 ANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
A LG + G+ +A+ +E A ++
Sbjct: 415 AMNNLGALLQETGRTTEAEPWYERAADTGHTGA 447
>gi|303272293|ref|XP_003055508.1| intraflagellar transport protein 122 [Micromonas pusilla CCMP1545]
gi|226463482|gb|EEH60760.1| intraflagellar transport protein 122 [Micromonas pusilla CCMP1545]
Length = 1233
Score = 36.9 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 23/199 (11%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
ME +D + K + L+ F + V + A A
Sbjct: 665 MEMFSDLRQFDEAKKWAEEYAHTKGGDSTLV--------QEFVHRQAEWAEEVSDYAAAA 716
Query: 61 LELFNSNKLDDARSSFEK-------ILSQDNKLYNPLSNMYIASILVAK-GDTKNAAEIF 112
+ K D A K + + + ++ + ++ A+ GD +A +++
Sbjct: 717 TMYIQAKKFDKAIDLIAKNGWKDKLVEVTRALGASDVKHLKLCAMHFAQWGDHVHARDVY 776
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGI 170
K+ +D+ + A + A I++ + + K+ + N A +
Sbjct: 777 TKLGDDEGLLSLLVDAEQWEEAFIML-QQHPQHVEKVYLPYARWLAENDRFDEAR----L 831
Query: 171 SALKFGKVQKAKTIFEELA 189
+ K G+ A + E+L
Sbjct: 832 AYAKAGRSDAATRMLEQLT 850
>gi|162452825|ref|YP_001615192.1| hypothetical protein sce4549 [Sorangium cellulosum 'So ce 56']
gi|161163407|emb|CAN94712.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 800
Score = 36.9 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+ A L A+GD + A + +V + D +P A + AS E + L+ +
Sbjct: 531 HEAEALRARGDHEGAIAAYRRVLSLDRSPAPRIAIAETRLASDA--PGERSEGIRELEGI 588
Query: 154 SEPSNPMHQF---ANEILGISALKFGKVQKAKTIFEELA 189
+ + A E LG AL G ++A + E+A
Sbjct: 589 AGDGSIPRHLRDRAAERLGDVALAAGDRERAAARYSEVA 627
>gi|239994660|ref|ZP_04715184.1| TPR repeat protein [Alteromonas macleodii ATCC 27126]
Length = 668
Score = 36.9 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+A L + L++A+ + IL+ + ++S+ +GDTKNA +
Sbjct: 554 MLKAFNLSKAGNLEEAKQIYLDILTLTPSN--TGARERVSSLYQQQGDTKNALYHLDLLI 611
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
DD L+ A++ ++ + K L
Sbjct: 612 KDDFDNADY----LLRKAALQLEAGQRADAEKTLS 642
>gi|255281391|ref|ZP_05345946.1| ferredoxin [Bryantella formatexigens DSM 14469]
gi|255267879|gb|EET61084.1| ferredoxin [Bryantella formatexigens DSM 14469]
Length = 379
Score = 36.9 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 39/117 (33%), Gaps = 9/117 (7%)
Query: 12 GKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDD 71
G K + +K IA +L +++L+ +W+ + ++ +++ QA +
Sbjct: 3 GGKKRKRRIWKIIAVILGILVLAGIVWYAVRRVQTGERLREGQQSYQQAELTSE-----E 57
Query: 72 ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
S + + + ++ F D++P +R
Sbjct: 58 YVQSTDGQAQNGTAGEEQAETVQAGAEQTEAAQADSSVVFFTS----DISPEGLREV 110
>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
str. Fusaro]
gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
str. Fusaro]
Length = 397
Score = 36.9 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 15/157 (9%)
Query: 43 DGSHEKKKNIVGENFAQA------LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
D K+ V + A L+ + ++A +F+K + D + L+N A
Sbjct: 34 DSGDTGKQEEVSDKVVAAKLNEYGLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNN--KA 91
Query: 97 SILVAKGDTKNAAEIFLKVANDDL-APLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
L G A + K + P A L Y+E K +K +
Sbjct: 92 QALETVGKYDEALGFYEKAIKINAEDPDIWNNMA-----FSLSQVGKYDEAVKAYEK-AL 145
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
P + A ++ + G + A +E++ ++N
Sbjct: 146 ELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEEN 182
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L K D+A ++EK L Y + A L GD K A E + KV ++
Sbjct: 125 AFSLSQVGKYDEAVKAYEKALELRPD-YPN-AWYGKALNLSQAGDYKAAIEAYEKVLEEN 182
Query: 120 LA 121
Sbjct: 183 SD 184
>gi|17229395|ref|NP_485943.1| hypothetical protein alr1903 [Nostoc sp. PCC 7120]
gi|17130993|dbj|BAB73602.1| alr1903 [Nostoc sp. PCC 7120]
Length = 1547
Score = 36.9 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 19/157 (12%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
++ A L K + A +L +N A+ + + ++ A + +
Sbjct: 854 RYSAASALGEI-KSEAAIPGLINLLEDENSPVR-----RRAASALGQIKSEAAIPGLINL 907
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D+ +P+ +AAS L S I ++ L + ++ + A LG
Sbjct: 908 LEDENSPV------RRRAASALGQIKSEAAIPGLINLLEDENSSVRYSAASSLG-----Q 956
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIAS 212
K ++A +L +D NS + R+ L I +
Sbjct: 957 IKSEQAILGLIKLLEDENS--SVRRRAASALGEIKSE 991
>gi|294508725|ref|YP_003572784.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
Length = 554
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 51/138 (36%), Gaps = 7/138 (5%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
G+ A F +++ A ++++ Y + M +L G + A E +
Sbjct: 122 SGDLEEIASFYFEEGEMETALEVIDRLIELHP--YTSDAWMRRGILLNNLGRPEEALEAY 179
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
+ + + TL I +D+ + + + NP+H A LG++
Sbjct: 180 EQALDVNPT-----DTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTL 234
Query: 173 LKFGKVQKAKTIFEELAK 190
+ +++ A F+ A
Sbjct: 235 ERDEQLEAAVEAFQRCAD 252
>gi|255036514|ref|YP_003087135.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
gi|254949270|gb|ACT93970.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
Length = 758
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 67 NKLDDARSSFE-KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
++++A + I +D Y + IL+ G+ K A + F KVA
Sbjct: 196 GRMEEAVAEITTAIRQKDEMAY----RLQRGDILMRTGNEKRAVKDFEKVARTHPK---- 247
Query: 126 RYAATLQAASILVDTSSYEEISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
A ++ A+ L+ + + + +K L A + S+ + +A+
Sbjct: 248 ---AQIRYANALLSLNQFGMAKAVFEKYLETDDRTFRGDAYLGMAHSSYGLQQTGEAQRY 304
Query: 185 FEE 187
++
Sbjct: 305 YKL 307
>gi|325136890|gb|EGC59487.1| tetratricopeptide repeat protein [Neisseria meningitidis M0579]
gi|325202865|gb|ADY98319.1| tetratricopeptide repeat protein [Neisseria meningitidis
M01-240149]
Length = 470
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 91 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFEDR 148
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 149 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 184
>gi|292493884|ref|YP_003529323.1| hypothetical protein Nhal_3926 [Nitrosococcus halophilus Nc4]
gi|291582479|gb|ADE16936.1| Tetratricopeptide TPR_2 repeat protein [Nitrosococcus halophilus
Nc4]
Length = 578
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 11/156 (7%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV-ANDDLA 121
L K D A S E ++ + + + IL+ + A +F ++ +
Sbjct: 237 LQQQGKEDVALESLETVIEKGEASFPL--RLAYGQILMEANRSAKAQALFRELEQEQPES 294
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
P + + + ++ YE Q+L + A LG A G Q+A
Sbjct: 295 PDVL-----IAQGLLAMEQLEYERAKNYFQRLLQIGES-AAQARFYLGRLAELQGDPQRA 348
Query: 182 KTIFEELAKDNNSPFGISTRSQMI--LANIIASDQR 215
+ + + ++ +I N+ A+ QR
Sbjct: 349 IKWYGSITRGGLVVDAQVRQAVVIARQGNMQAARQR 384
>gi|217077017|ref|YP_002334733.1| TPR Domain containing protein [Thermosipho africanus TCF52B]
gi|217036870|gb|ACJ75392.1| TPR Domain containing protein [Thermosipho africanus TCF52B]
Length = 139
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQD-NKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
E +A+EL K D+A + +++ ++ + YN L N+Y KG A E +
Sbjct: 3 EKLIKAIELSKQGKFDEAEKIYRELIKENVPEAYNNLGNIYR-----RKGLIAKAIEYYK 57
Query: 114 KV 115
+
Sbjct: 58 QA 59
>gi|56476298|ref|YP_157887.1| hypothetical protein ebA1575 [Aromatoleum aromaticum EbN1]
gi|56312341|emb|CAI06986.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 679
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 6/163 (3%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
F + L K+ +A ++F+ Q + + + + G + A +
Sbjct: 490 SSRFNMGVTLQIEKKIPEAVAAFDAAEKQGLRTFGLY--YHRGATRAMMGKFEGAIDDL- 546
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
++A D A +R A + Y+ L P + L ++ L
Sbjct: 547 ELAIDKAADDKLRTHARTLRGDAAMQIRRYDVAVGEYLALLRDD-PRNYAVRLGLAMAHL 605
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+ A + ++L + R+ +L ++ S
Sbjct: 606 GMRNLAAAGPLLDDLLAEKPHHAAYYGRA--LLNSMQGSSAAA 646
>gi|282859658|ref|ZP_06268760.1| putative membrane protein [Prevotella bivia JCVIHMP010]
gi|282587576|gb|EFB92779.1| putative membrane protein [Prevotella bivia JCVIHMP010]
Length = 1108
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK----GDTKNAAEIFLKV 115
ALEL +K D A +K+ + P M A+ + G A +I+ ++
Sbjct: 977 ALELIAESKYDKALKVLQKVEKEIPYTVVPCVYMSGAADIAQAYTLLGKKAKAQQIYDQL 1036
>gi|254784361|ref|YP_003071789.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
turnerae T7901]
gi|237687029|gb|ACR14293.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 733
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPL 123
S + D A +++L+++ + + A K ++ I + +
Sbjct: 442 QSGEYDQAIQLIDQVLAREPDNTPA-ARLL-ALTYHDKNESAKGVRILEDCIQRHPKDFV 499
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ A + +D + E+ +K+ P + A LGIS G++++A+
Sbjct: 500 NYKDLARI-----YLDNGNLEKAITNYKKVL-EITPQNNAALNNLGISYYFLGELKQARK 553
Query: 184 IFEE 187
FE
Sbjct: 554 YFEL 557
>gi|110598921|ref|ZP_01387165.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
gi|110339463|gb|EAT57994.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
Length = 586
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 53/153 (34%), Gaps = 31/153 (20%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
++ ++L + L + IA + + D + + ++ + PL
Sbjct: 120 AEGNYSESIKRSRELLQIHPGNLDAL--LLIAQVSSWQRDYDTSLATYDRLIAANPVPLY 177
Query: 125 VRYAATLQAASILVDT--SSYEEISKI------LQKLSE--------------------- 155
R A + D+ + Y++ + L+ +
Sbjct: 178 YREKARVLGWMTRYDSALAEYDKAIQRYPENSALKAEAAAKREYYRNAYRHSLSAYQLWL 237
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ P+H A LG +++ G+ ++A + ++EL
Sbjct: 238 DAEPLHPEALFDLGQLSMQQGRWREASSTYDEL 270
>gi|77464933|ref|YP_354437.1| hypothetical protein RSP_1356 [Rhodobacter sphaeroides 2.4.1]
gi|77389351|gb|ABA80536.1| hypothetical protein RSP_1356 [Rhodobacter sphaeroides 2.4.1]
Length = 1808
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 17/162 (10%)
Query: 44 GSHEKKKNIVGE-NFAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVA 101
E + + F +L A+ + + Y ++ A+ A
Sbjct: 103 ARQETARARASDLAFLSDYDLTR------AKEQAAGLGHEHTVNGYTAEEHLQSAARAEA 156
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS------E 155
+GD AA + + A A+ D+SS + + + +
Sbjct: 157 QGDRIAAANFTGAAVSASDRAESWIDYARRLRAAGEADSSSRDTLRDRAFRAAINGYLRA 216
Query: 156 PSNPMHQFANEILGISAL---KFGKVQKAKTIFEELAKDNNS 194
S + A L +SA + + +A + + + +++
Sbjct: 217 GSPALRHTALVELALSAETIDRGRDMVQALRLAQSIQPRDDT 258
>gi|116622726|ref|YP_824882.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 547
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 9/159 (5%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
AL L ++ + +++ ++++L + K + + + + + D + AAE F
Sbjct: 341 ALLLEHAGQFEESERYYKQVLDRAPK--EEEARFRMGFLRLQREDYRGAAEAFEGCLKYR 398
Query: 120 LA-PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
A P A A + D + L + ++P A L +++
Sbjct: 399 PAWPEAHANLALAYSGMGERDHAE------RLYEKMLDADPKSMDALRGLAALSIQANDY 452
Query: 179 QKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
A L + + + ++ D+ +
Sbjct: 453 DTALEFHVRLIDLGDRTPEVLYNAGLMYEKAGQQDKSVR 491
>gi|221640853|ref|YP_002527115.1| alpha-2-macroglobulin domain-containing protein [Rhodobacter
sphaeroides KD131]
gi|221161634|gb|ACM02614.1| Alpha-2-macroglobulin domain protein precursor [Rhodobacter
sphaeroides KD131]
Length = 1808
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 17/162 (10%)
Query: 44 GSHEKKKNIVGE-NFAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVA 101
E + + F +L A+ + + Y ++ A+ A
Sbjct: 103 ARQETARARASDLAFLSDYDLTR------AKEQAAGLGHEHTVNGYTAEEHLQSAARAEA 156
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS------E 155
+GD AA + + A A+ D+SS + + + +
Sbjct: 157 QGDRIAAANFTGAAVSASDRAESWIDYARRLRAAGEADSSSRDTLRDRAFRAAINGYLRA 216
Query: 156 PSNPMHQFANEILGISAL---KFGKVQKAKTIFEELAKDNNS 194
S + A L +SA + + +A + + + +++
Sbjct: 217 GSPALRHTALVELALSAETIDRGRDMVQALRLAQSIQPRDDT 258
>gi|167835380|ref|ZP_02462263.1| TPR domain protein [Burkholderia thailandensis MSMB43]
Length = 606
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 370 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKTDEARKLLANLQASDPRDAAVIAR-TD 428
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
ASIL K AA+ + D +R
Sbjct: 429 ASILFTSRRYKEAADRLAQAVEDFPDDPDLR 459
>gi|297204971|ref|ZP_06922368.1| tetratricopeptide repeat protein [Streptomyces sviceus ATCC 29083]
gi|297148809|gb|EDY60949.2| tetratricopeptide repeat protein [Streptomyces sviceus ATCC 29083]
Length = 670
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 48/152 (31%), Gaps = 15/152 (9%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYN-PLSNMYIASILVAK 102
+ + AL+ + A + + + + L+ + +A+
Sbjct: 469 YRQMAEAGNPEALWHVALQRSQAGDRKGAEAVYRQAADAGDASAQESLARLRMAA----- 523
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
GD + AA ++ + A +R AA Q A ++ + +
Sbjct: 524 GDQEGAAAVYEQAVQAGSASALMRLAALRQNAG---------DLPRAEAAYRQAIEAGFV 574
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNS 194
A L I + G A+ + + + ++
Sbjct: 575 EARVDLAILRIAAGDRTGAEGLLKAAVEAGDT 606
>gi|149918345|ref|ZP_01906836.1| hypothetical protein PPSIR1_36557 [Plesiocystis pacifica SIR-1]
gi|149820871|gb|EDM80280.1| hypothetical protein PPSIR1_36557 [Plesiocystis pacifica SIR-1]
Length = 786
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 11/143 (7%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYN-----PLSNMYIASILVAKGDTKNAAE 110
+ A +DDA + F + K L+N+ +A I +G+T+ A +
Sbjct: 246 AYMAATASLAKGDIDDALTRFGLLTQSFPKGERDKRIVELANLALARIHHDQGETELAVK 305
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEIL 168
+ +++ D A + A L+ +++ + L L P +P+ ++
Sbjct: 306 SYRRISRDSPFFPE----AMYETAWTLLAAGAHDRALQALDLLLVYDPDSPIVPEIKQLR 361
Query: 169 GISALKFGKVQKAKTIFEELAKD 191
G ++ Q A+ F L ++
Sbjct: 362 GKVKIQMRDWQGAEGEFLALRRE 384
>gi|108761947|ref|YP_630742.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108465827|gb|ABF91012.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 526
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 10/162 (6%)
Query: 51 NIVGENF-AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ GE + A AL L + K +A + ++ + A L A+GD A
Sbjct: 121 SQSGERYGAHALHLLAAGKSAEAEQYLAGLEARGANNARLT--LARALALQARGDLPGAR 178
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ F + A T L+D Y + + K + NP H A
Sbjct: 179 QAFARAAEASWRDPRF----TTAYGEALMDEGQYPQAVEAFAK-ATSVNPDHLLARVSTA 233
Query: 170 ISA-LKFGKVQKAKTIFEEL-AKDNNSPFGISTRSQMILANI 209
++ + K+++A+ + + A+ G+ R+ + A +
Sbjct: 234 LAHTYQGRKMEEAQQVLSGVEARGAELTPGLKARAGALKAEL 275
>gi|77362434|ref|YP_342008.1| putative unknown membrane associated protein [Pseudoalteromonas
haloplanktis TAC125]
gi|76877345|emb|CAI89562.1| putative unknown membrane associated protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 441
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK--LYNPLSNMYI--ASILVAKGDT 105
+ V A+A +L + + + + I + + Y ++ M+ I + D
Sbjct: 55 REKVYSQLARAQKLADDGDVKAGLKALDSIQDRASSMNSYE-IAMMHNFYGFIYYNENDL 113
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
A F KV ++ P +R + T A + + S Y ++
Sbjct: 114 PKAIAAFEKVVAEEGIPETLRLSTTFSLAQLAMANSDYNKVIT 156
>gi|253689381|ref|YP_003018571.1| hypothetical protein PC1_3012 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755959|gb|ACT14035.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 206
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
W + + ++ ++ Q E K D A ++ EK +++ Y L+++ +A
Sbjct: 38 GWRFWQNHQNDSVM-AASASYQQVTEQLAEGKTD-AIAATEKFTAENKNAYGALASLELA 95
Query: 97 SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
V D A + ++ + + L+ A + + + ++ K L +
Sbjct: 96 RHYVDLKDFAKAEQQLVQALSQTK-DADLLAVVNLRLARVQLQENKADDALKTLDAIKLE 154
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEE 187
A E+ G G Q A+ + +
Sbjct: 155 G--WASQAAEVRGDILASKGDNQAARDAYNK 183
>gi|108759977|ref|YP_631572.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622]
gi|108463857|gb|ABF89042.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622]
Length = 499
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 11/152 (7%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+K FA AL+ + + LD AR FE ++ + + N + + I +G +
Sbjct: 69 QKSGSAQSAFAAALQSYEAGDLDGARKGFEAVVDELPQSLN--AQFNLGVIAERQGRPDD 126
Query: 108 AAEIFLKV-ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A + KV D AV + A +D E I+ + L P
Sbjct: 127 ARVAYEKVLLLDPAHVPAVVNLGVMYRAQGRLD----EAIALFQRALKTPGREYDASLLN 182
Query: 167 ILGISALKFGKVQK----AKTIFEELAKDNNS 194
L I+ GK+ + A+ + D +
Sbjct: 183 SLSITYRVAGKLDESEAAARRVLVRNKDDPGA 214
>gi|42521851|ref|NP_967231.1| hypothetical protein Bd0225 [Bdellovibrio bacteriovorus HD100]
gi|39574381|emb|CAE77885.1| conserved hypothetical protein with TPR domain [Bdellovibrio
bacteriovorus HD100]
Length = 627
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
AL L + D A + E+IL + Y+A++ + A + + K+
Sbjct: 323 ALILIEQKRYDTAVAKLEEILKDAPESDKV--RFYLAAVYEETRQHEKAVKEYTKI---- 376
Query: 120 LAPLAVRYAATLQAASIL 137
+ A + AA +L
Sbjct: 377 PSTSTYYGEAVVHAAYLL 394
>gi|291296014|ref|YP_003507412.1| SARP family transcriptional regulator [Meiothermus ruber DSM 1279]
gi|290470973|gb|ADD28392.1| transcriptional regulator, SARP family [Meiothermus ruber DSM 1279]
Length = 1089
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 39/123 (31%), Gaps = 9/123 (7%)
Query: 71 DARSSFEKILSQDNKLYNPLSNMYI--ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
+A + + + + L+ + + L+ G + A D
Sbjct: 891 EATVQRAMVEAAEVGAWRDLALLRSDYGNALMVAGRLEEARRELEAALRDLREMGERARL 950
Query: 129 --ATLQAASILVDTSSYEEISKILQKLSE---PSNPMHQFANE--ILGISALKFGKVQKA 181
A L++ E+ + L++ + A L ++ L+ G ++A
Sbjct: 951 GHALFNLGFTLLEQGYLEQSRQTLEESVQIWRDRKEYRHTARSLAALALNHLRAGNRKQA 1010
Query: 182 KTI 184
+ I
Sbjct: 1011 RQI 1013
>gi|183221520|ref|YP_001839516.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
(TPR) domains [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 700
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 46/171 (26%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKK-NIVGENFAQ----ALELFNSNKLDDARSSFEKI 79
L +L ++ Y+ +K +N+ +L ++ K ++AR + ++
Sbjct: 148 IALTVLGVMYDEAGRYINAIERLEKAIQYDSKNYFAFYNLSLAFKHAGKFEEARRAAQRA 207
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
Y + ++ GD ++A E + + LAP V
Sbjct: 208 KEIAPNDYRVA--LLQGNLFQEIGDPQSAIEAYKE--GQSLAPSDV-------------- 249
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
T +Y L IS LK G + +A + F+++ +
Sbjct: 250 TLTYN-----------------------LAISYLKQGNLAEAISEFQKVVQ 277
>gi|149912346|ref|ZP_01900904.1| putative N-acetylglucosaminyl transferase [Moritella sp. PE36]
gi|149804572|gb|EDM64645.1| putative N-acetylglucosaminyl transferase [Moritella sp. PE36]
Length = 254
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 27 LLILMILSLAIWFYLFD----GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ 82
L +L+ ++ A +Y+ + K++ + + L S++ D A F +L
Sbjct: 5 LFLLLPVAAAYGWYMGRRNGRYLQQDKQHTISREYVTGLNFLLSDQPDKAVDLFIDLLDV 64
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA 134
D++ + ++ + ++ +G+ + A +I + R A LQ A
Sbjct: 65 DSETIDT--HLALGNLFRQRGEVQRAIKIHQNLIARPSLTHEQRNLALLQLA 114
>gi|159040058|ref|YP_001539311.1| transcriptional regulator [Salinispora arenicola CNS-205]
gi|157918893|gb|ABW00321.1| transcriptional regulator, winged helix family [Salinispora
arenicola CNS-205]
Length = 1043
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 8/136 (5%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
A+ S + AR+ I+ Q + Y + +++A + +GD AA AND
Sbjct: 832 AVVRLRSADVRGARAELLSIVEQASAGRYASTARIFLADLCRQEGDLDAAARQLEHAAND 891
Query: 119 DLA--PLAVRYAATLQAASILVDTSSY----EEISKILQKLSE-PSNPMHQFANEILGIS 171
A R L A + V ++ + L ++ P PM +
Sbjct: 892 RGAQQDRVFRSLYRLSAGHLAVARGDLRGAARDLREGLDLIAAMPHVPMGATVGAGVAAL 951
Query: 172 ALKFGKVQKAKTIFEE 187
L+ G A +
Sbjct: 952 LLRAGSPASAAQVLGA 967
>gi|89900213|ref|YP_522684.1| response regulator receiver domain-containing protein [Rhodoferax
ferrireducens T118]
gi|89344950|gb|ABD69153.1| response regulator receiver domain protein [Rhodoferax
ferrireducens T118]
Length = 561
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 19/181 (10%)
Query: 48 KKKNIVGENFAQA----------LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
K +G+ QA + + A + + + L+ + A
Sbjct: 119 HKAAQLGDRLRQARIRKISLQEIFSAVEAEDFEHA-AQLCQQRFETRGLFWLYAARVGAE 177
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
+L+ G A ++ V P A L A L+D + L+ L
Sbjct: 178 LLLRTGQYAQAQTMYEAVVQAKTLP-----WAKLGVARSLLDAGQTARAASTLENLISED 232
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
P + A ++LG + + GK +A ++ A +P IS + + A D++
Sbjct: 233 -PSYSDAYDVLGRAQFELGKFDQALATYKMAAN--LTPASISRLQNLGMMTYYAGDRQEA 289
Query: 218 K 218
+
Sbjct: 290 E 290
>gi|158294417|ref|XP_315587.4| AGAP005578-PA [Anopheles gambiae str. PEST]
gi|157015555|gb|EAA11830.5| AGAP005578-PA [Anopheles gambiae str. PEST]
Length = 742
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+++ L + +A + + + S D L+ + A + + + D A +
Sbjct: 489 DHYVSVLRALYRGRFAEANAECQHLHSYD----PHLALLQFAHVALGRQDFGTAETFLAQ 544
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSS 142
+ D+ +R A L +A++ +
Sbjct: 545 LLADEALAPLMRIRALLLSANVHIHNGQ 572
>gi|329999204|ref|ZP_08303384.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
gi|328538369|gb|EGF64500.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
Length = 1159
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 57/167 (34%), Gaps = 14/167 (8%)
Query: 41 LFDGSHEKKKNIVGENFA-QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
D E + + + QA +L +S A + ++ + ++ +A
Sbjct: 561 WTDNIRELEARLQSDRVLRQANQLRDSGDEAQAIA----LIKRQPASVRY--DLTLADWA 614
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS-YEEISKILQKLSEPSN 158
+GD++ A + +V + A L A + + ++++Q +
Sbjct: 615 QQRGDSQTAIADYQRVLRQEADNGD----ARLGLAEVYLAEGDKPAARAQVMQLKGAETE 670
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
M+ L + L G A+ IF ++ + + ++
Sbjct: 671 SMNMQRRVALARAGL--GDTADAQRIFNQIVPQAKAQPPSMESALVL 715
>gi|308388524|gb|ADO30844.1| hypothetical protein NMBB_0352 [Neisseria meningitidis alpha710]
gi|325145202|gb|EGC67483.1| tetratricopeptide repeat protein [Neisseria meningitidis
M01-240013]
Length = 477
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 98 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFEDR 155
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 156 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 191
>gi|269215257|ref|ZP_05988024.2| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970]
gi|269207935|gb|EEZ74390.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970]
Length = 488
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQADGRVKEAVSHYRELIAAQPDAPAV--RMRLAAALFEDR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|152972388|ref|YP_001337534.1| cellulose synthase subunit BcsC [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150957237|gb|ABR79267.1| putative cellulose synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 1158
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 57/167 (34%), Gaps = 14/167 (8%)
Query: 41 LFDGSHEKKKNIVGENFA-QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
D E + + + QA +L +S A + ++ + ++ +A
Sbjct: 560 WTDNIRELEARLQSDRVLRQANQLRDSGDEAQAIA----LIKRQPASVRY--DLTLADWA 613
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS-YEEISKILQKLSEPSN 158
+GD++ A + +V + A L A + + ++++Q +
Sbjct: 614 QQRGDSQTAIADYQRVLRQEADNGD----ARLGLAEVYLAEGDKPAARAQVMQLKGAETE 669
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
M+ L + L G A+ IF ++ + + ++
Sbjct: 670 SMNMQRRVALARAGL--GDTADAQRIFNQIVPQAKAQPPSMESALVL 714
>gi|13877157|gb|AAK43724.1|AF364092_2 penicillin-binding protein PBP5 [Enterococcus faecium]
Length = 678
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNSNKLD 70
+IA +IL++ + +FY + E + GE F QAL + NK
Sbjct: 14 AYIAGAVILIVTASGGYFY-YRHYQESQAVEAGEKTVEQFVQALNKGDYNKAA 65
>gi|251772840|gb|EES53400.1| conserved protein of unknown function [Leptospirillum
ferrodiazotrophum]
Length = 171
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 13/132 (9%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV-- 115
+A L+ A + +K L + L+NM A I +G+ + A +V
Sbjct: 33 QKAYAEIKQGHLEQAETDLKKALRDNPTDPTILNNM--AFIQFKEGEFQKAIGYLEQVRA 90
Query: 116 --ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ND+ P + A IL+ + Y + +L L EP ++L + +
Sbjct: 91 LRSNDNDEPYILNE------ARILISSHHYRKALTLLS-LIEPRTKWPHGYRKMLAKALI 143
Query: 174 KFGKVQKAKTIF 185
GK KA I
Sbjct: 144 HNGKNAKALAIL 155
>gi|154252346|ref|YP_001413170.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154156296|gb|ABS63513.1| Tetratricopeptide TPR_2 repeat protein [Parvibaculum
lavamentivorans DS-1]
Length = 458
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
+ + + ++ + +S + +A ++FE++L+ + + +
Sbjct: 55 GGAYQILKPEERARAGKPDYDYMLGIAAIDSGRPAEAVAAFERVLAVEPNHLQARAELGR 114
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
A I + + + A V P +VR AT+ +DT
Sbjct: 115 AYIAMN--EPEAARRELATVEAQRDVPDSVR--ATIDRYVAALDTG 156
>gi|15676230|ref|NP_273362.1| hypothetical protein NMB0313 [Neisseria meningitidis MC58]
gi|81857619|sp|Q9K165|Y0313_NEIMB RecName: Full=TPR repeat-containing protein NMB0313; Flags:
Precursor
gi|7225533|gb|AAF40758.1| conserved hypothetical protein [Neisseria meningitidis MC58]
Length = 488
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFENR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|225849933|ref|YP_002730167.1| Tetratricopeptide repeat family protein [Persephonella marina
EX-H1]
gi|225645117|gb|ACO03303.1| Tetratricopeptide repeat family protein [Persephonella marina
EX-H1]
Length = 228
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIF 112
E + AL + K ++AR F+ + + Y+ + +I +GD + A E F
Sbjct: 104 ELYKYALNAYYKGKTEEARKYFQIFVEEYPGSDMYDN-ALFWIGQTYYTEGDYEKAIEAF 162
Query: 113 LKVANDDLAPLAVR----YAATLQAASILVDTSSYEEISKILQKL 153
++ ND A A L+ A + EE K+L+++
Sbjct: 163 DRLINDCETGKAQECNKYPVAMLKKAYSYIKLGEIEEAKKLLKEI 207
>gi|221111758|ref|XP_002160454.1| PREDICTED: similar to regulator of microtubule dynamics 1, partial
[Hydra magnipapillata]
Length = 335
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+S+YEE + +K E S + +LG++ L+ G KAK F+++ +
Sbjct: 275 SSTYEEALQNFEKAEELSPSFYSTNQYMLGLAYLRLGNKAKAKEWFQKVCE 325
>gi|258508688|ref|YP_003171439.1| hypothetical protein LGG_01693 [Lactobacillus rhamnosus GG]
gi|257148615|emb|CAR87588.1| Conserved protein [Lactobacillus rhamnosus GG]
gi|259649994|dbj|BAI42156.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
Length = 406
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 16 MGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKK 49
M K + I L++L+++ + W+ L+D H ++
Sbjct: 1 MKKWIWGSIGGLIVLIVVGIGGWW-LYDHFHYQQ 33
>gi|239787711|emb|CAX84219.1| Magnetosome protein MamA [uncultured bacterium]
Length = 216
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP 159
G + A + +VA + + L V T S EE ++L+K + ++P
Sbjct: 57 AKSGRYEQAIPLLEQVARQNPNDGEI----PLYLGVSYVRTGSVEEGIELLEK-AVAADP 111
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
+ A ILG++ ++ K + A + E++AK N + F + R + L N+
Sbjct: 112 ANMKAATILGLAYVQAKKYEMAVPLLEKVAKANPANFNVRFRLGVALDNL 161
>gi|218781843|ref|YP_002433161.1| Sel1 domain protein repeat-containing protein [Desulfatibacillum
alkenivorans AK-01]
gi|218763227|gb|ACL05693.1| Sel1 domain protein repeat-containing protein [Desulfatibacillum
alkenivorans AK-01]
Length = 210
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 12/132 (9%)
Query: 66 SNKLDDARSSFEKILS--QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
A F+K + + L M++ + + D K A + K AN
Sbjct: 57 ERDYSQAAMYFQKAADEQDAPEAWFMLGRMHLEGLGFEQ-DIKEGARDYAKAANLG---- 111
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A Q A++ + +Y+E ++ + H A ++G+ L+ G A
Sbjct: 112 --HDEARYQLAALFFSSRAYDEAFDWAAPAAKNN---HAKAQFLVGMLFLEVGDNDLALE 166
Query: 184 IFEELAKDNNSP 195
A ++P
Sbjct: 167 WLARSAVKGHAP 178
>gi|156042368|ref|XP_001587741.1| hypothetical protein SS1G_10981 [Sclerotinia sclerotiorum 1980]
gi|154695368|gb|EDN95106.1| hypothetical protein SS1G_10981 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 528
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F + + ++ A F+K+L+ LS A I GD +NA + +L +
Sbjct: 75 FRRGAAYLSLGRMAQAAQDFDKVLTIKPGHEPALS--QRAKIRAKNGDWENAKQDYLALG 132
Query: 117 NDDLAPLAVRYAATLQ-AASILVD 139
A + Q AAS+ +D
Sbjct: 133 ASQGAEEELANLIEAQGAASLAMD 156
>gi|301063289|ref|ZP_07203834.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300442586|gb|EFK06806.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 476
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 17/136 (12%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV-AN 117
Q + + S K +DA F+ IL +D + L + + + A K
Sbjct: 275 QTVVMAVSKKPEDAMEKFQGILKKDPDAW--LPQLGLGIAFLRDNRYPEAITRLNKAREK 332
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEE----ISKILQKLSEPSNPMHQFANEILGISAL 173
P +R TL A ++ ++ I +L+ + ++G
Sbjct: 333 QPEFPPILR---TLGEAYLM--NGEPQQARHVIEAVLELDHSDKAALL-----LMGTIYE 382
Query: 174 KFGKVQKAKTIFEELA 189
+ GK++KA IFE+L+
Sbjct: 383 EEGKMEKALRIFEKLS 398
>gi|255578920|ref|XP_002530313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530169|gb|EEF32080.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 328
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 16/161 (9%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
E N + F L +A F +I ++ + + ++ Y A I
Sbjct: 153 FHKMRSEGLLNSAVKMFDA---LSKDGLTHEALELFSQIKNKGHMP-DVVA--YTAVIEA 206
Query: 101 ---AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
A G +K A + F+++ +AP A Y ++ + D + +K + ++
Sbjct: 207 YANAGGQSKEALKAFMRMLAAGVAPNAYTYTVLIK--GLAGD-GKLADANKYVLEMMGKG 263
Query: 158 NPMHQFANEILGI--SALKFGKVQKAKTIFEELAKDNNSPF 196
M A + + K KV +AK + +++ P
Sbjct: 264 --MRPNAGTYSTVFEAYAKAQKVDEAKLLLQQMKGKGFVPE 302
>gi|158333254|ref|YP_001514426.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
gi|158303495|gb|ABW25112.1| TPR domain protein, putative [Acaryochloris marina MBIC11017]
Length = 460
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
E++ F A + + ++KIL+ D + L+ A++ +GD K
Sbjct: 368 EQQPEKSDFLFELAGLYALNGNKQKEETVYDKILTIDPQSI--LALTSKATLRSEQGDNK 425
Query: 107 NAAEIFLKVANDDLAPLAVRYAATL 131
A ++ K + L
Sbjct: 426 AAKALYSKAEAAAPTDQLKQEIRKL 450
>gi|159042591|ref|YP_001531385.1| thioredoxin domain-containing protein [Dinoroseobacter shibae DFL
12]
gi|157910351|gb|ABV91784.1| thioredoxin domain protein [Dinoroseobacter shibae DFL 12]
Length = 303
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 37/132 (28%), Gaps = 10/132 (7%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA--AEI 111
GE A + DA +F IL ++ + + A + + + D A A
Sbjct: 132 GEAVEAAEAMLTEGAAVDAAQTFAAILGEEPENAAAYGGLVRAHLAMDELDKAEALIAAA 191
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
VA A + A+ E+ + + A L +
Sbjct: 192 PDAVAKSPELDAARAQLELARQAA---QAGPVAELRAKVTADPDD-----HQARFDLAQA 243
Query: 172 ALKFGKVQKAKT 183
G Q A
Sbjct: 244 LYANGDTQAAVD 255
>gi|294140148|ref|YP_003556126.1| hypothetical protein SVI_1377 [Shewanella violacea DSS12]
gi|293326617|dbj|BAJ01348.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 206
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 41/151 (27%), Gaps = 38/151 (25%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQ--- 59
S + K IA ++ + L W Y D + + E F
Sbjct: 5 STEEQQVDAIKQFWKDYGSS-IAVGAVVGLGGLFGWNYYSDH-QITQAELASEAFQAVSA 62
Query: 60 --------------------------------ALELFNSNKLDDARSSFEKILSQDN-KL 86
A + L+ A ++ + +++ K
Sbjct: 63 SNISDNGMLTAAENFAKDHSQKGYQSLLELIVAKAAVEAGDLEKAEATLKSVVASAPDKG 122
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
++ M +A + +G A +V++
Sbjct: 123 LVMVATMRLARVQAEQGQIATAITTLSQVSD 153
>gi|262066201|ref|ZP_06025813.1| tetratricopeptide repeat family protein [Fusobacterium
periodonticum ATCC 33693]
gi|291380108|gb|EFE87626.1| tetratricopeptide repeat family protein [Fusobacterium
periodonticum ATCC 33693]
Length = 936
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 15/135 (11%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + K D+ + +N Y + A F V ++
Sbjct: 483 SLLDQQKYDEMNQYLSSVSDDNNLSY------LKGIAAMGLKKYDEAETHFQNVLSNGDQ 536
Query: 122 PLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN--EIL---GISALKF 175
L+ + Y ++ + Y E + ++ NP + A E+L G+S +
Sbjct: 537 SLSTKVYLNRVRNFFL---AEKYNEAIQAGEQYLSKINPDKEKAIYSEMLDKIGLSYFRV 593
Query: 176 GKVQKAKTIFEELAK 190
GK +A++ + ++A
Sbjct: 594 GKYDQARSYYSKIAS 608
>gi|199597174|ref|ZP_03210606.1| hypothetical protein LRH_07561 [Lactobacillus rhamnosus HN001]
gi|199591978|gb|EDZ00053.1| hypothetical protein LRH_07561 [Lactobacillus rhamnosus HN001]
Length = 406
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 16 MGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKK 49
M K + I L++L+++ + W+ L+D H ++
Sbjct: 1 MKKWIWGSIGGLIVLIVVGIGGWW-LYDHFHYQQ 33
>gi|58039743|ref|YP_191707.1| hypothetical protein GOX1290 [Gluconobacter oxydans 621H]
gi|58002157|gb|AAW61051.1| Hypothetical protein GOX1290 [Gluconobacter oxydans 621H]
Length = 413
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 10/111 (9%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE 77
+ + + + I +LA + D VG++ QA S A + +
Sbjct: 8 RLSARNLLLAGVFGIAALAGSAHADDVL----GQAVGKDLQQAQSALASKNYAKAMEAVD 63
Query: 78 KILS----QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ D + Y + M A+I G+T A + + + N P A
Sbjct: 64 AADAVKGKTDYEAY-TTAQMR-AAIAAQSGNTDAAIKAYDVLINSSRTPKA 112
>gi|294670886|ref|ZP_06735742.1| hypothetical protein NEIELOOT_02590 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307373|gb|EFE48616.1| hypothetical protein NEIELOOT_02590 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 209
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 12/171 (7%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+W+ +L+L L W K + L K + S + LS
Sbjct: 23 RWLFVVLLLASLVYLGWVLYQGHIKTKNEEAA----TALAGLVEKAKTSQDKQSLQADLS 78
Query: 82 QDNKLYN-----PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASI 136
+ Y + M +A+ L +G + A + V + P VR A + A++
Sbjct: 79 ILQQNYPESISSAQATMMVAADLFDQGQYEAAEKQLNWVLQNQQIP-FVRALAIQRLATV 137
Query: 137 LVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ Y+ LQ E G GK ++A ++E+
Sbjct: 138 QLQQKKYDAALATLQ--MPVDAAFEALILETQGDVLYAQGKNKEALAVYEQ 186
>gi|94971406|ref|YP_593454.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94553456|gb|ABF43380.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 900
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 64/171 (37%), Gaps = 18/171 (10%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
VG+ ++ A + ++K+ + + Y+ + + A + +G +A +
Sbjct: 67 RVGDRYSS------DGFTVKAIAMYKKLTKLNPQAYDCVQRL--AELYTQQGLYSDARQQ 118
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSS------YEEISKILQKLSEPSNPMHQFAN 165
+L VA+ + ++ AA + + +D + ++ + + E N + A+
Sbjct: 119 YLVVADQFMRSNQLQDAARIFQRVLELDPENTTMQNKLADLYEKVGNKDEARNMFFRSAD 178
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+ +L + LA D ++ + R Q+ + A+
Sbjct: 179 SLYARGSLPQADEALGR----VLALDPHNSRALMLRGQISMEGGDAAGAIT 225
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F A L+ L A + ++L+ D L M I + GD A +VA
Sbjct: 174 FRSADSLYARGSLPQADEALGRVLALDPHNSRAL--MLRGQISMEGGDAAGAITWLEQVA 231
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKI 149
+ + P ++ A + + + E
Sbjct: 232 DLETNPDGLKELVR---AYLKANRLADAERQAR 261
>gi|28867914|ref|NP_790533.1| thioredoxin [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969278|ref|ZP_03397416.1| thioredoxin [Pseudomonas syringae pv. tomato T1]
gi|301381782|ref|ZP_07230200.1| thioredoxin [Pseudomonas syringae pv. tomato Max13]
gi|302061018|ref|ZP_07252559.1| thioredoxin [Pseudomonas syringae pv. tomato K40]
gi|302130530|ref|ZP_07256520.1| thioredoxin [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28851150|gb|AAO54228.1| thioredoxin [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925956|gb|EEB59513.1| thioredoxin [Pseudomonas syringae pv. tomato T1]
gi|330964927|gb|EGH65187.1| thioredoxin [Pseudomonas syringae pv. actinidiae str. M302091]
gi|331018222|gb|EGH98278.1| thioredoxin [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 290
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 2/124 (1%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + +++L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQALFAESRFSEAEAVLKQLLGEDNTNAAAL--ILYARCLAERGELSEARAV 176
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
V D A L + E+ L + + HQ A + L
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAEAATLPDAAELKSRLAQNPQDDEAAHQLAIQQLSRQ 236
Query: 172 ALKF 175
+
Sbjct: 237 QYEA 240
>gi|114321630|ref|YP_743313.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1]
gi|114228024|gb|ABI57823.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1]
Length = 500
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 15/142 (10%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ + + AL L + D+A + K+ + + L + + G
Sbjct: 317 AEQTRGAEQIAARYGLALALIRDRQFDEAEALLSKLEADLSGQPAWL--LARGRLQQRSG 374
Query: 104 DTKNAAEIFLKVAN----DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP 159
D AA K + AP + A L+D E ++L + + +P
Sbjct: 375 DPAQAAATLRKAQELFPGNRAAPTYLADA--------LLDAGQPNEARQVLTR-AVRDHP 425
Query: 160 MHQFANEILGISALKFGKVQKA 181
H L +A + G+ A
Sbjct: 426 NHPELKRRLAEAANEAGRPVDA 447
>gi|300696854|ref|YP_003747515.1| hemin-binding outer membrane transmembrane protein associated with
biofilm formation (hmsH) [Ralstonia solanacearum
CFBP2957]
gi|299073578|emb|CBJ53098.1| putative hemin-binding outer membrane transmembrane protein
associated with biofilm formation (hmsH) [Ralstonia
solanacearum CFBP2957]
Length = 816
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L + ++ DA +E + + + AA + + D
Sbjct: 301 VALASRGRMKDATQRYEAM--SQAGKVPAYTRVSAGDAYAYLDKPDRAAAAYTQALKDAG 358
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
+DT YE+ +L K+ + + A E
Sbjct: 359 PGEIETGDVQEGLFYAELDTGRYEDARALLDKMKADNPEYVRLAPEA 405
>gi|254238561|ref|ZP_04931884.1| hypothetical protein PACG_04715 [Pseudomonas aeruginosa C3719]
gi|254244399|ref|ZP_04937721.1| hypothetical protein PA2G_05254 [Pseudomonas aeruginosa 2192]
gi|126170492|gb|EAZ56003.1| hypothetical protein PACG_04715 [Pseudomonas aeruginosa C3719]
gi|126197777|gb|EAZ61840.1| hypothetical protein PA2G_05254 [Pseudomonas aeruginosa 2192]
Length = 259
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 72 ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAAT 130
A S + + + L+ + A GD +AA + P + A
Sbjct: 140 ASGSAGSLAADEQLDGPVLAMLTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQ 199
Query: 131 LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ A D + E++++ + + E++ + K G A
Sbjct: 200 VRLA--QGDAAQAEQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGA 248
>gi|330446673|ref|ZP_08310325.1| type IV pilus biogenesis/stability protein PilW [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328490864|dbj|GAA04822.1| type IV pilus biogenesis/stability protein PilW [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 252
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 8/186 (4%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+ L L+ A +G K L + + AR + E L
Sbjct: 4 WSVYPLLSCLLFTGCATVEVADNGREFDPKAASEARLNLGLNYLKDGQWERARENLELAL 63
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAATLQAASILVD 139
D Y + M A GD A +++ + + + D
Sbjct: 64 KYDPTYYRAQNAM--AYYYQKVGDKDAAEKMYKQALRYSPKNGDVLNNYGVFLCSEGRYD 121
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE-ELAKDNNSPFGI 198
+ + I Q + ++ A G+ + K G ++ A FE LA D N P +
Sbjct: 122 EAIAAFVRAIEQPYYYLISASYENA----GLCSRKQGNLEAATGYFENALAHDPNRPRSM 177
Query: 199 STRSQM 204
+Q+
Sbjct: 178 LQLAQV 183
>gi|206601977|gb|EDZ38459.1| Probable TPR-domain containing protein [Leptospirillum sp. Group II
'5-way CG']
Length = 1076
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ + + +A K + A F+ ILS + + A IL+++
Sbjct: 745 ETYRASHPSDISATMLEAQGELLLKKPEKALPLFDAILSSHPDN--TGARLGKAGILLSQ 802
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G T+ A + + D LA A L I + + + + L+KL + Q
Sbjct: 803 GKTEKAKNLATMILADHPDNLA----ANLLMTRIDQKNNDFTDEADRLEKLHQKHPDWIQ 858
Query: 163 FANEILGISALKFGKVQKAKTIFEEL 188
+ ++ + LK + ++A++I + +
Sbjct: 859 PSLTLVAV-DLKLKRFREAESIADSI 883
>gi|188995187|ref|YP_001929439.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
gi|188594867|dbj|BAG33842.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
Length = 565
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 19/159 (11%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E A L + + +D +I D + YN + M GD + A F K
Sbjct: 359 ELLYSATLLESPAQKEDIYKVATQIYPDDYRAYNNIGMMRY-----RSGDLEGARTWFQK 413
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A+ P A + ++ + E+ + + E LG+ L+
Sbjct: 414 AASVK--PNAETDM---NLGLLALNEGNVEQAKQYFGSAANV-----PELGEALGLLYLQ 463
Query: 175 FGKVQKAKTIFEELAKDNNSPFGIS----TRSQMILANI 209
G +A F + +N + I R+Q IL I
Sbjct: 464 EGNYAQAVAAFGKTESNNAAVANILNRDYNRAQEILNGI 502
>gi|108757342|ref|YP_630318.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108461222|gb|ABF86407.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 289
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN 92
L+L++ +G KK +A +L+ + KL +A FE+ + L++
Sbjct: 5 LALSLLAATPEGGAAKKAEDAESLRLRATKLYRAKKLGEACPLFERAAKLAPEHGPTLAD 64
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+ + L +G + A ++L+ A R
Sbjct: 65 LGL--CLQKQGRKEQALAVYLRALKASGADAKTR 96
>gi|62739321|gb|AAH94088.1| LOC431836 protein [Xenopus laevis]
Length = 511
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 9/101 (8%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY-AATLQAASILV-------DTSS 142
+ + +IL+ +GD + A + FL V + +Q V +
Sbjct: 123 ARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQLERVQEVERNVGGASEAYERRD 182
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
Y +L+K+ +P A E+ L+ G++ A
Sbjct: 183 YYGAIALLEKVI-EFSPWDPSARELRAECYLQVGELSNAVQ 222
>gi|56476930|ref|YP_158519.1| hypothetical protein ebA2654 [Aromatoleum aromaticum EbN1]
gi|56312973|emb|CAI07618.1| hypothetical protein ebA2654 [Aromatoleum aromaticum EbN1]
Length = 246
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ AL L + DA + FE+ + Q + + P ++ + + + + A+ F
Sbjct: 128 QYEAALNLLKEGRYKDALTGFEQFIRQHPQSTFLPGAHFWAGNAALQAKEVAAASTYFNT 187
Query: 115 VAN----DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
V D AP A+ A Q A L DT + +E K L + P + Q A + LG+
Sbjct: 188 VLKTWPQDAAAPDAMLGLANSQQA--LGDTKTSQETLKKLVE-RFPDSSAAQAARQRLGV 244
>gi|325294498|ref|YP_004281012.1| hypothetical protein Dester_0297 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064946|gb|ADY72953.1| hypothetical protein Dester_0297 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 224
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 12/180 (6%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+K I +++ ++ + + + + + L K+ +A F +
Sbjct: 48 WKKIFAVVVAFLIVGGGYLSYMWYQNSIEV-KASQLVDEGLFKLEKGKIKEALQLFSEAE 106
Query: 81 SQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ + + L + KG + ++ F +A + ++ +L A I +
Sbjct: 107 KKYPEAPSTLIARFL-------KGKLEKNSDEFRYLAYKNKYIVSPPSKTSLTADYI--E 157
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD-NNSPFGI 198
E K+ L + + A I AL+ G +KA + E L D + P I
Sbjct: 158 KGQLTEAEKLFSTLKRDKDWTYPEALYDSIIVALRKGDRKKALELLEILKGDYKDLPITI 217
>gi|257784472|ref|YP_003179689.1| hypothetical protein Apar_0669 [Atopobium parvulum DSM 20469]
gi|257472979|gb|ACV51098.1| Tetratricopeptide domain protein [Atopobium parvulum DSM 20469]
Length = 467
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 4/133 (3%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L + ++ +A +S + + + + + S GD +NA + A D+
Sbjct: 81 ALLAAGRVQEAIASLTNAVQDVSYATPYKAQLALGSAYEKIGDVRNAGIAYRNAAVDEKN 140
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN--EILGISALKFGKVQ 179
P +L A + + + + L +NP+ LG++ + ++
Sbjct: 141 PNPSSALCSLGACFMGL-NRPVDAVEAYRTALDF-ANPLENSNKIYADLGLAYVAANRMS 198
Query: 180 KAKTIFEELAKDN 192
+A F D
Sbjct: 199 EAVDAFTHATTDG 211
>gi|239816066|ref|YP_002944976.1| hypotheticalprotein [Variovorax paradoxus S110]
gi|239802643|gb|ACS19710.1| TPR repeat-containing protein [Variovorax paradoxus S110]
Length = 196
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 3/81 (3%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DL 120
L K ++A + + ++ + +P IL + A F ++ D
Sbjct: 34 TLLRQGKSNEALAKADAYIAGKPR--DPQMRFLRGVILTEQKKQNEAIAAFTQMTQDFPE 91
Query: 121 APLAVRYAATLQAASILVDTS 141
P A L AA D +
Sbjct: 92 LPEPYNNLAALYAAQSKFDQA 112
>gi|149376328|ref|ZP_01894091.1| TPR repeat protein [Marinobacter algicola DG893]
gi|149359342|gb|EDM47803.1| TPR repeat protein [Marinobacter algicola DG893]
Length = 187
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
+ + ++ + ++F++A+ L +AR FE+I D + PL+N+ I I + +
Sbjct: 26 EAERQAREAELTQDFSEAVALLRGGDSGNARDLFEQIHQADPERTGPLANLGI--IALQE 83
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
G+ A F +V D AA + + +E+ L + + ++P H
Sbjct: 84 GNADEAEAYFRQVLERD----PEHSAALTHLGVMAREQGEFEQAET-LYRQALEADPGHL 138
Query: 163 FANEILG-ISALKFGKVQKAKTIFEELAKDNNSPFG 197
A L + + G++++A ++E+ P
Sbjct: 139 PAMLNLAILLDIYLGRLEEALPLYEQYQSLAEEPNP 174
>gi|298506099|gb|ADI84822.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
Length = 896
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 10/178 (5%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
++ N FAQ + L K +A + + + L + L+N+ A +
Sbjct: 725 YEAVLRNNPNHAPALFAQGMLLEMGGKKREAVTKYRQTLEKAESFAPALNNL--AFLYAE 782
Query: 102 K-GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
G + A + L + A A+ LV E KIL+K+ P
Sbjct: 783 GYGPREEALRMALTALKQEPANAAIADT----YGYALVKNGRAGEAVKILEKV-VKLMPS 837
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
+ L ++ G +A T +E + P +++++LA + + KK
Sbjct: 838 NPAVRYHLALAYRDTGDRARAATTLQEALNQGDFPES--GQARIMLAELSGAAGTVKK 893
>gi|229819837|ref|YP_002881363.1| hypothetical protein [Beutenbergia cavernae DSM 12333]
gi|229565750|gb|ACQ79601.1| TPR repeat-containing protein [Beutenbergia cavernae DSM 12333]
Length = 668
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 16/164 (9%), Positives = 46/164 (28%), Gaps = 15/164 (9%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
+ +DG + + + + +D A + + + A
Sbjct: 493 VAGEWWDGLLAEVPPSWAREYHRGVLAHAVGNVDAADAFYAASHEHAPSAWAFRGR---A 549
Query: 97 SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
+ +GD E++ + + +R +A + +D + + P
Sbjct: 550 RVAAERGDDAACVELYAQALALASDQVTLRR----EAVAAALDAGDATRAFRFVDDAPHP 605
Query: 157 SNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ + +A+ G ++A + D +
Sbjct: 606 DGRLRL----LEARAAVVAGDSERA----ARILADGVVVPDLRE 641
>gi|215918886|ref|NP_819144.2| tol-pal system protein YbgF [Coxiella burnetii RSA 493]
gi|206583771|gb|AAO89658.2| tol system periplasmic component [Coxiella burnetii RSA 493]
Length = 305
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 54 GENFAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ QAL+L + D A++SF+ + N Y ++ ++ I + + D KNAA F
Sbjct: 176 SNTYRQALDLLTKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEF 235
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
V + V A L+ A I + ++ + L ++
Sbjct: 236 QTVRDKFPKSEKVLD-AKLKLAIIDAEDGKIKQAKEELTEI 275
>gi|71068232|gb|AAZ23087.1| possible methyltransferase [Streptomyces fradiae]
Length = 352
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 44/136 (32%), Gaps = 14/136 (10%)
Query: 90 LSNMYIAS--ILVAKGDTKNAAEIF--------LKVANDDLAPLAVRYAATLQAASILVD 139
L+ + A+ + +A G A + ++A A V+ + D
Sbjct: 153 LAAIRQAADHLFLADGTMDAALLAYGTHHIAPQERLAAVTEALRVVKDGGHV--VLHDFD 210
Query: 140 TSSYEEI--SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
+S + I+ + + F+ ++L + G + +++ L +
Sbjct: 211 DASPMARFFTDIVHPHTTAGHDYRHFSRDLLAELFAEAGTPARVVDLYDPLVVRGTTEEE 270
Query: 198 ISTRSQMILANIIASD 213
R +A++
Sbjct: 271 ARRRMCAYVADMYGVG 286
>gi|225575069|ref|ZP_03783679.1| hypothetical protein RUMHYD_03158 [Blautia hydrogenotrophica DSM
10507]
gi|225037739|gb|EEG47985.1| hypothetical protein RUMHYD_03158 [Blautia hydrogenotrophica DSM
10507]
Length = 346
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 25/179 (13%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE 77
K Y W+ + +L E+K + QA + + ++A F+
Sbjct: 2 KRAYGWLLAAGCVSVLMAGC--------QEEKA-----IYDQARKDLDQGAYEEAVQGFQ 48
Query: 78 KILSQDNKLYNPLSNMYIASILVAK-GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASI 136
+ + +D A I K GD + AA+ F + + R A+
Sbjct: 49 EAMERDVHKAESC---RGAGIASLKLGDYEEAADYFEQALSQKGLDKGFRKDVLSYQATA 105
Query: 137 LVDTSSYEEISKILQ---KLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
YE+ K + +LSE + + L + AK F+++ +++
Sbjct: 106 QYKNGQYEDAQKTSESLLELSEDAQSCYLAGRVALAV-----DDYDLAKENFQKVIEED 159
>gi|209694320|ref|YP_002262248.1| putative outer membrane protein [Aliivibrio salmonicida LFI1238]
gi|208008271|emb|CAQ78416.1| putative outer membrane protein [Aliivibrio salmonicida LFI1238]
Length = 203
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 3/159 (1%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
+ + K + + L +++ ++ I + Y L+ + +A
Sbjct: 38 GWKYYQSMQVTAKETASAGYERTLTALHTSGAKAEETTQTFIAAHAKSEYAALAALQLAK 97
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS 157
+ V A E + ++N+ V A ++AA I + + ++ L S
Sbjct: 98 VQVEANQLDAALEQLIWISNNSKDDALV-AMAQVRAARIQAEQNKFDAALTTLAG--VKS 154
Query: 158 NPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
E+ G AL G + A++ + E +D +P
Sbjct: 155 TSWSARVAELKGDIALSQGDIATARSEYTESLQDGMNPS 193
>gi|197120079|ref|YP_002140506.1| glycosyltransferase [Geobacter bemidjiensis Bem]
gi|197089439|gb|ACH40710.1| glycosyltransferase, TPR domain-containing protein [Geobacter
bemidjiensis Bem]
Length = 616
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 26/151 (17%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ + D+A + + K+L Q + L N+ I V G A + + +
Sbjct: 378 VEAGEADEAIAIYLKLLEQSPRDVETLLNLGIICESV--GQPAEADSFYQRALEIEPWNQ 435
Query: 124 AVRY-AATLQ--------AASILVDTSSYEEISKILQKLSEPSN---------------P 159
A R L+ AA+ D E+ + Q+L + P
Sbjct: 436 AARQQLTALRQRTEEPQSAAAPEEDDLCAEDRYQRSQELVSQGDLDGAFQELKQILSSYP 495
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAK 190
A+ L + A + G ++A+ +E+ A+
Sbjct: 496 DFAPAHNDLAVLAYQQGDKEQARAHYEKAAE 526
>gi|43342|emb|CAA48842.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus hirae]
Length = 678
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNSNKLD 70
+IA +IL++ + +FY + E + GE F QAL + NK
Sbjct: 14 AYIAGAVILIVTASGGYFY-YRHYQETQAVEAGEKTVEQFVQALNKGDYNKAA 65
>gi|325955036|ref|YP_004238696.1| hypothetical protein Weevi_1417 [Weeksella virosa DSM 16922]
gi|323437654|gb|ADX68118.1| hypothetical protein Weevi_1417 [Weeksella virosa DSM 16922]
Length = 1207
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 18/137 (13%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDN--KLYNPLSNM-YIASILVAKGDTKNAAEIF 112
A +L + +A+ +K++ + YN S + IAS+ G+T A E+F
Sbjct: 1019 AIRLAEDLIKEGRNAEAKKVLDKVMKEIPAWPQYNVGSGVSRIASVYAHLGETTKANELF 1078
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP-MHQFANEILGIS 171
+ A ++ + IS +L +L+ N M NEI G++
Sbjct: 1079 TYAKKNLEANKTY------------LEKLKQQGISGVLSELASVKNDLMMVNYNEINGLA 1126
Query: 172 ALKFGKVQKAKTIFEEL 188
+ GK ++A F+EL
Sbjct: 1127 S--AGKKEQAMIKFKEL 1141
>gi|298713360|emb|CBJ33577.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 700
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 4/135 (2%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
GE A A LF K D+A S + LS+ L + + G A
Sbjct: 31 AQQGELVAAAAGLFERRKFDEAESVLRQALSESPSNPPALVLLGR--VRATTGKLDEAER 88
Query: 111 IFLKVANDDLAPL-AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
++ A A + A + E + L+ ++ + +
Sbjct: 89 LYRVALEASPRNAPAHHALAKVFAFQQRWAEAK-ESFERSLEADADNAEAWLGLGRVSMA 147
Query: 170 ISALKFGKVQKAKTI 184
+ + A+++
Sbjct: 148 TGNEEAAERHYARSL 162
>gi|144897599|emb|CAM74463.1| TPR repeat [Magnetospirillum gryphiswaldense MSR-1]
Length = 395
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 14/137 (10%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
A L + + D A + D L ++ + + D A F V
Sbjct: 5 QHAATLAANGRFDAALRLLVGLDGDDA----ALVAFRRGALALKRNDAFAAVAGFEAVMT 60
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
D A+R L +A + Y++ L+ Q E G++ L G+
Sbjct: 61 LDPDFPALRD--ALVSAYRR--DARYDDAIA----LAGAGPQTRQIRYEC-GMAHLALGQ 111
Query: 178 VQKAKTIFEEL-AKDNN 193
+A F+ + A D +
Sbjct: 112 GGEALACFDAILAADPD 128
>gi|161830946|ref|YP_001596060.1| tol-pal system protein YbgF [Coxiella burnetii RSA 331]
gi|30025847|gb|AAP04427.1| 34 kDa outer membrane protein [Coxiella burnetii]
gi|161762813|gb|ABX78455.1| tol-pal system protein YbgF [Coxiella burnetii RSA 331]
Length = 300
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 54 GENFAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ QAL+L + D A++SF+ + N Y ++ ++ I + + D KNAA F
Sbjct: 171 SNTYRQALDLLTKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEF 230
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
V + V A L+ A I + ++ + L ++
Sbjct: 231 QTVRDKFPKSEKVLD-AKLKLAIIDAEDGKIKQAKEELTEI 270
>gi|121635549|ref|YP_975794.1| hypothetical protein NMC1858 [Neisseria meningitidis FAM18]
gi|120867255|emb|CAM11024.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
Length = 489
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 110 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFENR 167
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 168 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 203
>gi|313679724|ref|YP_004057463.1| adenylate/guanylate cyclase [Oceanithermus profundus DSM 14977]
gi|313152439|gb|ADR36290.1| adenylate/guanylate cyclase [Oceanithermus profundus DSM 14977]
Length = 1051
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ + +G + A + +L L P A R A L+ A++ ++ S E + L
Sbjct: 573 AYLRAGDAQKREGIFRGAEQHYLTAL--PLLPEAERSEARLRLAALHLEGGSPETALRWL 630
Query: 151 QKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ + A + G++ + G+V++A+
Sbjct: 631 EPETSEE------AVRLTGLAQARLGRVREAR 656
>gi|218893794|ref|YP_002442663.1| hypothetical protein PLES_50841 [Pseudomonas aeruginosa LESB58]
gi|218774022|emb|CAW29838.1| hypothetical protein PLES_50841 [Pseudomonas aeruginosa LESB58]
Length = 259
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 72 ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAAT 130
A S + + + L+ + A GD +AA + P + A
Sbjct: 140 ASGSAGSLAADEQLDGPVLAMLTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQ 199
Query: 131 LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ A D + E++++ + + E++ + K G A
Sbjct: 200 VRLA--QGDAAQAEQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGA 248
>gi|163744109|ref|ZP_02151474.1| thioredoxin [Phaeobacter gallaeciensis 2.10]
gi|161382607|gb|EDQ07011.1| thioredoxin [Phaeobacter gallaeciensis 2.10]
Length = 316
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
A ++ + DA +F +L +D+K + A + + D A
Sbjct: 147 AIEAAEQMLTDGDVADAAQTFAAVLGEDDKNAAAYGGLARAHVAMGDLDQAEAVL----- 201
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISAL 173
+ AP + AA ++AA + + E + + +L + + P A L +
Sbjct: 202 ---NGAPAEISDAAEIEAAHAQIALARQAENAGPVAELRATVEAYPEDHQARFDLAQALH 258
Query: 174 KFGKVQKAKT 183
G+ + A
Sbjct: 259 AAGEAEAAVD 268
>gi|92117696|ref|YP_577425.1| tetratricopeptide TPR_2 [Nitrobacter hamburgensis X14]
gi|91800590|gb|ABE62965.1| Tetratricopeptide TPR_2 [Nitrobacter hamburgensis X14]
Length = 446
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
YE L+++ NP LG+ K G + A++ F+E K ++P I
Sbjct: 70 GDYEAAIGALERMLF-FNPNLPRVKLELGVLYFKLGSYELARSYFQEAIKAADAPDDIRA 128
Query: 201 RSQMILANII 210
+ + L I
Sbjct: 129 QVRAYLTEID 138
>gi|310820323|ref|YP_003952681.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309393395|gb|ADO70854.1| Tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 243
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 53 VGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
V E A L KLD AR+ E++++ + ++ + I +A+G A F
Sbjct: 119 VSERLVAARRLIEEGKLDAARAVLERLVALGVAGAS--AHTLLGGIYLAQGVLDRALTCF 176
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSY----EEISKILQKLSEPSNPMHQFANEIL 168
+ + + A L+ A + + + E++ +L+ + +P+ Q A +L
Sbjct: 177 EEALSREPADLS----ALISRGQVRLSLGDLRRAQEDLQVVLESGTA-GSPLVQQARHLL 231
>gi|240017382|ref|ZP_04723922.1| putative outer membrane protein OmpU [Neisseria gonorrhoeae FA6140]
Length = 469
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 90 YLQQAQQDKMLALYAQGILAQADGRVKEAVSHYRELIAAQPDAPAV--RMRLAAALFEDR 147
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 148 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 183
>gi|217969590|ref|YP_002354824.1| AraC family transcriptional regulator [Thauera sp. MZ1T]
gi|217506917|gb|ACK53928.1| two component transcriptional regulator, AraC family [Thauera sp.
MZ1T]
Length = 549
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 13/139 (9%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ F +L A ++ + + Y A + G + AA ++ +
Sbjct: 131 DAFLPVWQLMKLGDPVGALAACRE-ARDRHPQYLVDFMRLQAELHAQIGQIEEAAALYRE 189
Query: 115 VANDDLAPLAVRYAAT---LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
+ P A A ++ A + + ++ +P A+E+L
Sbjct: 190 ILAARPIPWASLGLARMLVVREAWVEAEHL-LADLVAR--------HPRFIEAHELLARV 240
Query: 172 ALKFGKVQKAKTIFEELAK 190
+ G+ +A + A
Sbjct: 241 QEETGRPAEACGTLQRAAD 259
>gi|16930360|gb|AAL31868.1| 34kDa outer membrane protein [Coxiella burnetii]
Length = 300
Score = 36.5 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 54 GENFAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ QAL+L + D A++SF+ + N Y ++ ++ I + + D KNAA F
Sbjct: 171 SNTYRQALDLLTKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEF 230
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
V + V A L+ A I + ++ + L ++
Sbjct: 231 QTVRDKFPKSEKVLD-AKLKLAIIDAEDGKIKQAKEELTEI 270
>gi|302343855|ref|YP_003808384.1| tol-pal system protein YbgF [Desulfarculus baarsii DSM 2075]
gi|301640468|gb|ADK85790.1| tol-pal system protein YbgF [Desulfarculus baarsii DSM 2075]
Length = 285
Score = 36.5 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAAEIFL 113
E + AL L+ D AR FE++L Y + ++ ++ + A +
Sbjct: 166 ERYNLALRLYEQKSFDAARDRFEELLKDKPDGAYAASAQFWVGECYYSQKRFEEAILAYN 225
Query: 114 KV----ANDDLAPLAV 125
+V A + AP A+
Sbjct: 226 QVIKRYAKNAKAPAAM 241
>gi|238020698|ref|ZP_04601124.1| hypothetical protein GCWU000324_00588 [Kingella oralis ATCC 51147]
gi|237867678|gb|EEP68684.1| hypothetical protein GCWU000324_00588 [Kingella oralis ATCC 51147]
Length = 390
Score = 36.5 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 63/177 (35%), Gaps = 6/177 (3%)
Query: 20 CYKWIAPLLILMILSLAIWFYLFDGSHE--KKKNIVGENFAQALELFNSNKLDDARSSFE 77
+ + P+++L WF K+ V F +L+ A +
Sbjct: 6 IWSILVPIILLPAFFAMGWFAARIDMKTVLKQAKTVPAGFYASLDALVDKNTGRAAHNLA 65
Query: 78 KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
+++ Q Y+ N+ + + +G+ A + + D + + L +
Sbjct: 66 EVIDQQQNSYDL--NLTLGKLYRQRGENDKAIAMHKALL-DSPDTVGDKRTRVLYELGLN 122
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
++ + ++ + + N M + ANE+L + ++A + LA D +
Sbjct: 123 YQSAGLVDRAEQIFLELQQGN-MAKQANEVLLNIYQQDRDWEQAIATAQLLAHDEQT 178
>gi|322420010|ref|YP_004199233.1| lytic transglycosylase catalytic subunit [Geobacter sp. M18]
gi|320126397|gb|ADW13957.1| Lytic transglycosylase catalytic [Geobacter sp. M18]
Length = 706
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 8/125 (6%)
Query: 70 DDARSSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
D A + + + K Y A L G AE F ++ + VR
Sbjct: 204 DKAALELQNLAATGVKTEPYTGAELFKRAGTLYDLGRYLKGAEAFAEIPLTGESDDFVRK 263
Query: 128 AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ L Y++ LS + A + K G+ +A +F +
Sbjct: 264 V-KFKKGQALYKARRYQQAQSTFTALSGNAEAELWVARTLD-----KAGRADEAFQLFLK 317
Query: 188 LAKDN 192
LA+D
Sbjct: 318 LAQDP 322
>gi|221128763|ref|XP_002160675.1| PREDICTED: similar to regulator of microtubule dynamics 1 [Hydra
magnipapillata]
Length = 290
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+S+YEE + +K E S + +LG++ L+ G KAK F+++ +
Sbjct: 218 SSTYEEALQNFEKAEELSPSFYSTNQYMLGLAYLRLGNKAKAKEWFQKVCE 268
>gi|196229451|ref|ZP_03128316.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196226683|gb|EDY21188.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 582
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 16/148 (10%)
Query: 58 AQALELFNSNKLD---DARSSFEKILS--QDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
A L +++++ D + FE + ++N L+ M+ V +GD A F
Sbjct: 392 LAACALVSAHQVAYWLDGATLFEHTAAVTENNAWAFALAGMHR----VRQGDVSRAIAAF 447
Query: 113 L-KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
+ P R AA + +D + + + +P++ A+ +L ++
Sbjct: 448 QVSLRMKADQPAIWREFG---AALLRIDKAPAAAEAFRVALKYDPAD---LHASYLLAVT 501
Query: 172 ALKFGKVQKAKTIFEELAKDNNSPFGIS 199
K G+ +A +L +D G+
Sbjct: 502 LEKIGQTDEAIARLGQLVQDLPKSAGVQ 529
>gi|85716150|ref|ZP_01047125.1| hypothetical protein NB311A_05590 [Nitrobacter sp. Nb-311A]
gi|85696983|gb|EAQ34866.1| hypothetical protein NB311A_05590 [Nitrobacter sp. Nb-311A]
Length = 447
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
YE L+++ NP LG+ K G + A++ F+E K ++P I
Sbjct: 71 GDYEAAIGALERMLF-FNPNLPRVKLELGVLYFKLGSYELARSYFQEAIKAADAPDDIRA 129
Query: 201 RSQMILANII 210
+ + L I
Sbjct: 130 QVRAYLTEID 139
>gi|325117068|emb|CBZ52620.1| putative PPR repeat-containing protein [Neospora caninum Liverpool]
Length = 2081
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 5/139 (3%)
Query: 81 SQDNKLYNPLSNMYIASIL-VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+D L L + + A GD +N + +F ++ + L P ++ L AA+ D
Sbjct: 690 EEDLGLRPDLQSFHTAMDAFAKDGDIRNVSRLFDRLLANGLQPQTRTFSIRLHAAAQHGD 749
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
+ +I +Q N L K G + A +FE++ D P ++
Sbjct: 750 IAGARDIYADMQAWKVEPNAFVLT---TLIHLCTKAGHFKSAVRLFEKMTNDKVKP-TVA 805
Query: 200 TRSQMILANIIASDQRNKK 218
+ ++ A A+ R ++
Sbjct: 806 AWTALLDACCQAAGARAQE 824
>gi|307354733|ref|YP_003895784.1| tetratricopeptide repeat-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307157966|gb|ADN37346.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius
DSM 11571]
Length = 1070
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 13/140 (9%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKIL---SQDNKLYNPLSNMYIASILVAKGDTKN 107
G EL + ++A ++FE + +D + L G+
Sbjct: 621 EQSGLALILGHELEILGRHEEAAAAFEHFVRANREDAGGWREFGR-----SLGKIGEYVK 675
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
AA+ F K A + A +L++ Y++ + I L ++P +
Sbjct: 676 AAKSFEKAAAFRPEDKGI----LFDQAMLLLEIGEYKQSADIFDALRG-NDPENPAVRRG 730
Query: 168 LGISALKFGKVQKAKTIFEE 187
+ K AK FEE
Sbjct: 731 RAFALAGAKKYSAAKEAFEE 750
Score = 34.6 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 12/109 (11%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
K ++A +E L D L N A +L G AAE F ++ ++ L
Sbjct: 198 GKNEEALEIYETALKHDPSCIPALYN--RAYLLEKVGRYSEAAEAFREINTNNPNDL--- 252
Query: 127 YAATLQAASILVDTSSYEE----ISKILQKLSEPSNPMHQ--FANEILG 169
A + A+ L T +Y E I IL+K + A E+LG
Sbjct: 253 -IAAFRRATDLFWTGAYGECAHTIEMILKKTPDDIKAWQMMGVALELLG 300
>gi|329955063|ref|ZP_08296044.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
gi|328526353|gb|EGF53368.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
Length = 480
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
+ + + + +V A + AAS + ++ + ++++ + +
Sbjct: 385 NFQPGTKEYKEVYEIAATNYPADIVANINAASANIVYGDFDRAEQYMERVKDDPRAWNN- 443
Query: 164 ANEILGISALKFGKVQKAKTIFEE 187
LG+ A G + AK F +
Sbjct: 444 ----LGVLAWLSGDTEIAKEWFTK 463
>gi|170114746|ref|XP_001888569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164636482|gb|EDR00777.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1215
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%)
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEIS 147
+ A+ + +T A F K + R A L+ + D+ S + +
Sbjct: 72 RFSVQLASATTDAQRAETARAVTAFNKPDRSECFYPPFRTIAKLKTIQLNGDSKSLDGLM 131
Query: 148 KILQKLSEPSNPMHQFANE 166
+++ E P E
Sbjct: 132 DMIKGDIEGIKPSFVSDGE 150
>gi|163745438|ref|ZP_02152798.1| thioredoxin, putative [Oceanibulbus indolifex HEL-45]
gi|161382256|gb|EDQ06665.1| thioredoxin, putative [Oceanibulbus indolifex HEL-45]
Length = 306
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 47/142 (33%), Gaps = 6/142 (4%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
E + + + A A E+ DA +F IL +D M + I + + +
Sbjct: 128 EAPGDTLADAVAAAEEMLAEGAATDAAQTFAAILEEDPMNAAAYGGMVRSYIAMGELEQA 187
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A + AP A LQ A D E+++ ++ +NP A
Sbjct: 188 EAL-LNGAPIEISKAPELEAAHAQLQLAHQAADAGPVAELTEKVE-----ANPDDHQARF 241
Query: 167 ILGISALKFGKVQKAKTIFEEL 188
L + + A EL
Sbjct: 242 DLAQALYAHSDAEGAVDHLLEL 263
>gi|316984312|gb|EFV63286.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325141039|gb|EGC63544.1| tetratricopeptide repeat protein [Neisseria meningitidis CU385]
gi|325199508|gb|ADY94963.1| tetratricopeptide repeat protein [Neisseria meningitidis H44/76]
Length = 470
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 91 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFENR 148
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 149 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 184
>gi|198276683|ref|ZP_03209214.1| hypothetical protein BACPLE_02879 [Bacteroides plebeius DSM 17135]
gi|198270208|gb|EDY94478.1| hypothetical protein BACPLE_02879 [Bacteroides plebeius DSM 17135]
Length = 488
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
L MY + + G TK E++ AN + A + AAS + + +++ +
Sbjct: 375 SLQEMYRVAAMYQPG-TKEYKEVYEIAANTYPEDVT----ANVNAASANIISGDFKKAAS 429
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ K+ + S + LG+ A G + AK F++ A
Sbjct: 430 YMDKVKDDSRAFNN-----LGVLAWLSGNTEAAKEWFQKAAS 466
>gi|154300308|ref|XP_001550570.1| hypothetical protein BC1G_11343 [Botryotinia fuckeliana B05.10]
gi|150856666|gb|EDN31858.1| hypothetical protein BC1G_11343 [Botryotinia fuckeliana B05.10]
Length = 530
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F + + ++ A F+K+L+ LS A I GD +NA + +L +
Sbjct: 75 FRRGAAYLSLGRMAQAAQDFDKVLTIKPGHEPALS--QRAKIRAKNGDWENAKQDYLSLG 132
Query: 117 NDDLAPLAVRYAATLQ-AASILVD 139
A + Q AAS+ +D
Sbjct: 133 ASHGAEEELANLVEAQGAASLAMD 156
>gi|90399056|emb|CAJ86105.1| H0103C06.9 [Oryza sativa Indica Group]
gi|125550211|gb|EAY96033.1| hypothetical protein OsI_17906 [Oryza sativa Indica Group]
Length = 515
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 20/87 (22%)
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ A D A+R ++ + P+ + A L
Sbjct: 33 RLLDAFARDGDGDAALRVLRRMRHS----------------SPACAPTAASYTSAMSALA 76
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPF 196
K G+ A +F+++ + +P
Sbjct: 77 ----KAGRPADAAALFDDMLANGVAPD 99
>gi|212213379|ref|YP_002304315.1| Tol system periplasmic component [Coxiella burnetii CbuG_Q212]
gi|212011789|gb|ACJ19170.1| Tol system periplasmic component [Coxiella burnetii CbuG_Q212]
Length = 305
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 54 GENFAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ QAL+L + D A++SF+ + N Y ++ ++ I + + D KNAA F
Sbjct: 176 SNTYRQALDLLTKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEF 235
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
V + V A L+ A I + ++ + L ++
Sbjct: 236 QTVRDKFPKSEKVLD-AKLKLAIIDAEDGKIKQAKEELTEI 275
>gi|206889791|ref|YP_002249691.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741729|gb|ACI20786.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 758
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 6/94 (6%)
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
A + + A +F + P Y A I EE + +
Sbjct: 651 EAGEYFRQRNYGKAVTLFEEALKAQPTPEIYYYLA------ICYQEMKEEEKTLKYLREG 704
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
P + LG+ + G+ +AK +FEE+
Sbjct: 705 VEKFPKDSTLQKSLGLIYYQAGREDEAKKVFEEV 738
>gi|206578353|ref|YP_002236097.1| outer membrane autotransporter barrel domain protein [Klebsiella
pneumoniae 342]
gi|206567411|gb|ACI09187.1| outer membrane autotransporter barrel domain protein [Klebsiella
pneumoniae 342]
Length = 1350
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 18/162 (11%)
Query: 63 LFNSNKLDDARSSFE--------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
L NK +A++ + K+ + + A V+ G+ A +
Sbjct: 429 LREQNKSAEAQAMLQTLPQNLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPAGAIATLRE 488
Query: 115 VANDDLAPLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+R A +L + + E S ++ P A + A
Sbjct: 489 GVARYPDDPWLRLDLAR-----LLQKSGNGSEASSLMSAAYRPGAS--NNALYAAALFAS 541
Query: 174 KFGKVQKAKTIFEELAKDNNSP--FGISTRSQMILANIIASD 213
+ G Q+A+T+ + + + + R L A +
Sbjct: 542 ENGAWQQAQTLLARIPGGSQTSDMRDLRQRVNYNLQLATAEN 583
>gi|325267679|ref|ZP_08134330.1| outer membrane protein [Kingella denitrificans ATCC 33394]
gi|324980803|gb|EGC16464.1| outer membrane protein [Kingella denitrificans ATCC 33394]
Length = 469
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L+ ++++ V +A+A+ L + D A +IL ++ + + +A
Sbjct: 90 LYRRLPAEQQDPVLAEYAEAILLRADGRHDAAEQKLRQILERNPEFSPV--RLQLALTQS 147
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAV 125
G + AA ++ P V
Sbjct: 148 QNGKQREAAAEIARIRQTPELPAPV 172
>gi|320534566|ref|ZP_08035015.1| glycosyltransferase, group 1 family [Actinomyces sp. oral taxon 171
str. F0337]
gi|320133187|gb|EFW25686.1| glycosyltransferase, group 1 family [Actinomyces sp. oral taxon 171
str. F0337]
Length = 1333
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
A + L +AR +EK+ + + + + I + + A + +VA+
Sbjct: 30 AAAREYEDGNLAEARRLYEKLSE---GAQDTATRLRLGVIAERQERFEAALRTYTEVADH 86
Query: 119 DLA 121
D A
Sbjct: 87 DPA 89
>gi|262192342|ref|ZP_06050496.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae CT
5369-93]
gi|262031768|gb|EEY50352.1| type IV pilus (Tfp) assembly protein PilF [Vibrio cholerae CT
5369-93]
Length = 237
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 10/171 (5%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
L+I + + + + + + A L + + AR + EK L
Sbjct: 8 GLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPD 67
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
Y S + +A A G+ +A +++ ++ + T L Y+
Sbjct: 68 YYR--SQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTF-----LCKQGEYD 120
Query: 145 EISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKTIFE-ELAKDNN 193
+ ++ E A+ E G+ ALK G+ A+ F+ + D N
Sbjct: 121 TADQYFRRAVEQPYYYLISASYENAGLCALKAGETDNAREYFKRAIDHDPN 171
>gi|238896978|ref|YP_002921723.1| cellulose synthase subunit BcsC [Klebsiella pneumoniae NTUH-K2044]
gi|238549305|dbj|BAH65656.1| putative cellulose synthase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 1159
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 14/167 (8%)
Query: 41 LFDGSHEKKKNIVGENFA-QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
D E + + + QA +L +S A + ++ Q ++ +A
Sbjct: 561 WTDNIRELEARLQSDRVLRQANQLRDSGNEAQAIA----LIRQQPASVRY--DLTLADWA 614
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS-YEEISKILQKLSEPSN 158
+GD++ A + +V + A L A + + ++++Q +
Sbjct: 615 QQRGDSQTAIANYQRVLRQEADNGD----ARLGLAEVYLAEGDKPAARAQVMQLKGAETE 670
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
M+ L + L G A+ IF ++ + + ++
Sbjct: 671 SMNMQRRVALARAGL--GDTADAQRIFNQIVPQAKAQPPSMESALVL 715
>gi|242278705|ref|YP_002990834.1| hypothetical protein Desal_1232 [Desulfovibrio salexigens DSM 2638]
gi|242121599|gb|ACS79295.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
DSM 2638]
Length = 317
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 11/88 (12%)
Query: 34 SLAIWFYLFDGSHEKKK---------NIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
S ++ L S E+ N + N A KL +A ++K++ D
Sbjct: 90 SGVNYWALKQYSKERAAYRRVLELDPNHISANLYLAHSYLEEGKLAEAAVLYDKVIKLDE 149
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIF 112
YNP + A IL +G + A + +
Sbjct: 150 --YNPEALYNRADILGRQGKKEEAVKAW 175
>gi|149376116|ref|ZP_01893881.1| hypothetical protein MDG893_14008 [Marinobacter algicola DG893]
gi|149359521|gb|EDM47980.1| hypothetical protein MDG893_14008 [Marinobacter algicola DG893]
Length = 437
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 56/162 (34%), Gaps = 43/162 (26%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F +E F L++AR FE+ + + + L N+ + GD K+A +FL +
Sbjct: 31 FDAGVEAFRQGNLEEARIFFERARASGSNSPSLLYNL--GVVYFRLGDLKSAETVFLTLL 88
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
APLA LG+ + G
Sbjct: 89 ETPHAPLAYYN----------------------------------------LGLVNQRMG 108
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
V A+ FE A +SP + T ++ L + A +++
Sbjct: 109 NVGDARQWFER-AASQDSPEEVQTLARHQLTDATAQSSSDQR 149
>gi|24654335|ref|NP_611184.1| CG8950 [Drosophila melanogaster]
gi|7302835|gb|AAF57909.1| CG8950 [Drosophila melanogaster]
gi|21428590|gb|AAM49955.1| LD44919p [Drosophila melanogaster]
gi|220942382|gb|ACL83734.1| CG8950-PA [synthetic construct]
gi|220952760|gb|ACL88923.1| CG8950-PA [synthetic construct]
Length = 868
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
QA L N+ ++A S+EK++ Y+ + ++++L +G + A + +
Sbjct: 444 QAECLRQLNRTNEAIQSYEKVVQLAPFCYD--ARFTLSALLKQQGRHEEAVQALEQPGEA 501
Query: 119 DLAPLAVR 126
+ PL R
Sbjct: 502 EGQPLIAR 509
>gi|42524217|ref|NP_969597.1| hypothetical protein Bd2807 [Bdellovibrio bacteriovorus HD100]
gi|39576425|emb|CAE80590.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 588
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 13/133 (9%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA-EIFLKVANDDLA 121
L K + A + FEK+ + D M +++ + G K A + VA D
Sbjct: 62 LSREGKSEQAVALFEKVAALDPNSAAV--QMRLSAEYLKVGKVKEAILKAEQAVAKDSKN 119
Query: 122 PLAVRYAATLQAASILVDT--SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
++ L +A D + Y+ + L+ + + +G + +
Sbjct: 120 IESLLVLGGLYSADKSYDKAIAQYKAVL-HLEPKNSEAPIY-------IGSLYADKKEFK 171
Query: 180 KAKTIFEELAKDN 192
KA+ F L KD
Sbjct: 172 KAEQYFHSLLKDP 184
>gi|39933344|ref|NP_945620.1| thioredoxin [Rhodopseudomonas palustris CGA009]
gi|192288699|ref|YP_001989304.1| thioredoxin [Rhodopseudomonas palustris TIE-1]
gi|39652969|emb|CAE25711.1| possible thioredoxin [Rhodopseudomonas palustris CGA009]
gi|192282448|gb|ACE98828.1| thioredoxin [Rhodopseudomonas palustris TIE-1]
Length = 306
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 37/167 (22%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLS-NMYIASILVAKGDTKNAAEIFL 113
+ F A+ N + EK+ + + + A ++A+GD + AA I+
Sbjct: 105 DGFMGAVPESQVN------AFIEKLTAGMPGGAPTAAELLQEAEAVLAEGDVQTAASIYA 158
Query: 114 KVANDDL----------------------------APLAVRYAATLQAASILVDTSSYEE 145
+V D P A R A ++A ++D + +
Sbjct: 159 EVLRADGTNVAAIAGLARCYMQTGATEQAKKTLGLVPEAKREDAAVKAVQAMIDLAEQAQ 218
Query: 146 ISKILQKLS--EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ +L ++P+ A L I+ + + A T ++ K
Sbjct: 219 SLGPIAELEQKVAADPLDHQARFDLAIALNAADRREDATTHLLDIVK 265
>gi|328868476|gb|EGG16854.1| RNA polymerase II complex component [Dictyostelium fasciculatum]
Length = 1047
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-------- 120
+A F K D + PL+ + A++L+AKG+ AA F + +
Sbjct: 142 YQEATYRFTKADRIDPR--QPLTFIGKAALLLAKGEVDRAALNFQQALSASSNTHNSNTS 199
Query: 121 --APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
PL A L + +L + + + LQKL NP+ LG K GK+
Sbjct: 200 TTLPLF---PAKLGYSCVLFNKGEINKAVESLQKLLI-QNPVSASVRLGLGYCFYKLGKI 255
Query: 179 QKAKTIFEELAK 190
+ AK F+ + +
Sbjct: 256 EAAKKAFQRVLE 267
>gi|320533717|ref|ZP_08034332.1| tetratricopeptide repeat protein [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134069|gb|EFW26402.1| tetratricopeptide repeat protein [Actinomyces sp. oral taxon 171
str. F0337]
Length = 206
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 27/139 (19%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVAND----------------DLAPLAVRYAATLQAA 134
+ +A+ G + A +F + D + A A L A
Sbjct: 14 ARHNLANAYKTAGRLEEAIALFEQNLEDHTHILGPAHPGTLTARNNLASAYHDAGRLDEA 73
Query: 135 SILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD--- 191
L D + E+ ++IL P +P + L I+ G++ +A + E+ +D
Sbjct: 74 IPLFDQ-TLEDRTRIL----GPRHPNTLTSRNNLAIAYHNAGRLDEAIPLLEQTLEDSTR 128
Query: 192 ---NNSPFGISTRSQMILA 207
P +++R+ + +A
Sbjct: 129 ILGPRHPNTLTSRNNLAIA 147
>gi|317405474|gb|EFV85783.1| hypothetical protein HMPREF0005_01499 [Achromobacter xylosoxidans
C54]
Length = 628
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 8/130 (6%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ + D+A + +I D+ + M A++ G +A ++ A
Sbjct: 389 DQGQYDEAIAELGRI---DDPSLRFSARMRQAALRAKSGRIDDAIKMVDAAA---PQDEE 442
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK-AKT 183
R L A IL D + +L+ ++ + P L + + ++ +
Sbjct: 443 ERTLGVLTKAQILRDADRVGQAVSVLEA-ADQALPDTVEIKYELAMLYERQDRLADLERM 501
Query: 184 IFEELAKDNN 193
+ + +A D
Sbjct: 502 LRQVIALDPE 511
>gi|168014667|ref|XP_001759873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689003|gb|EDQ75377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 808
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 10/109 (9%)
Query: 29 ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS-SFEKI-LSQDNKL 86
+L++ L L+ E G F QA + A + +F+ + + +
Sbjct: 621 LLLVEVLRSLKQLYWPWRENGTIGEGSGFLQAATAASRGIGMTASASAFDSLFHAPHSSG 680
Query: 87 YNPLSNMYIASILVAK--------GDTKNAAEIFLKVANDDLAPLAVRY 127
L+ A + + + GD + A ++ + +R
Sbjct: 681 GAELARARSAQLRLQRGIWTSTNFGDLRRALAASERLVLLGVDEQELRD 729
>gi|188581460|ref|YP_001924905.1| thioredoxin [Methylobacterium populi BJ001]
gi|179344958|gb|ACB80370.1| Thioredoxin domain [Methylobacterium populi BJ001]
Length = 300
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ + + +A + ++ L A + +L ++ + ++ + A + G+T+NA +
Sbjct: 126 SEIDQVLEEAAAVASAGDLAAASELYAAVLREEPENLKAIAGL--AKTQLELGETENAKQ 183
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ V + A ++AA L + S +++ + +++ N A L
Sbjct: 184 VLAMVPEAKADDPLL---AGVRAALELAEQAGSLGDLAGLQRRIEADPNDFQ--ARFDLA 238
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ GK +A +A+ + + + R Q++
Sbjct: 239 LGLNGAGKRDEAVDQLVAIARADRNWNEDAARKQLLQ 275
>gi|209364238|ref|YP_001425324.2| tol system periplasmic component [Coxiella burnetii Dugway
5J108-111]
gi|212219429|ref|YP_002306216.1| tol system periplasmic component [Coxiella burnetii CbuK_Q154]
gi|207082171|gb|ABS78351.2| tol system periplasmic component [Coxiella burnetii Dugway
5J108-111]
gi|212013691|gb|ACJ21071.1| tol system periplasmic component [Coxiella burnetii CbuK_Q154]
Length = 305
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 54 GENFAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ QAL+L + D A++SF+ + N Y ++ ++ I + + D KNAA F
Sbjct: 176 SNTYRQALDLLTKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEF 235
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
V + V A L+ A I + ++ + L ++
Sbjct: 236 QTVRDKFPKSEKVLD-AKLKLAIIDAEDGKIKQAKEELTEI 275
>gi|298242645|ref|ZP_06966452.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|297555699|gb|EFH89563.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
Length = 484
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDN---KLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A + ++ D+A S ++++ D Y+ L A++ GD + AAEI+ ++A
Sbjct: 212 ASIQLDMHRYDEALSLANQMIALDPQGRAGYDML-----AAVYEQMGDAEQAAEIYQRIA 266
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
N A + + E I + + + A L + L+
Sbjct: 267 NQYPEDP---DAWEKLGFWRSLQDRTNEAIVA--YERAVELDAQRTTARFSLAEAYLEAD 321
Query: 177 KVQKAKTIFEELAK 190
+ A I++ +
Sbjct: 322 RYADALPIYQNMVD 335
>gi|289675574|ref|ZP_06496464.1| thioredoxin [Pseudomonas syringae pv. syringae FF5]
Length = 290
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQALFAESRFAEAEAQLKVLLGEDNTNGAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + ++ Q A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDAAELKSRLAQNTQDDEAALQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|221505553|gb|EEE31198.1| selective LIM-binding factor, putative [Toxoplasma gondii VEG]
Length = 1649
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 22/185 (11%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+M + KW + + + + + G A ++ N L +
Sbjct: 927 EMYRQLRKWSDAVRVARAEGKEAYKEVVKHLARQLVAEKGTA--AACQVLVKNDLAEDAV 984
Query: 75 SFE----------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
KI + K N+ A++ KGD +A F+ A
Sbjct: 985 ELALDAGDFSLSLKIAEESAKHMLETVNLRQAAVSEEKGDFSSAERHFVLAGKASEAIEM 1044
Query: 125 VRYA----ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
R+ + ++ AS + + + + L+ E + ++ G+
Sbjct: 1045 YRHLKDWKSAIRVASAHAPDAVPDILVSQARALANEGG-----MKEAEAL-YVEAGRADL 1098
Query: 181 AKTIF 185
A ++
Sbjct: 1099 AVAMY 1103
>gi|220933727|ref|YP_002512626.1| hypothetical protein Tgr7_0542 [Thioalkalivibrio sp. HL-EbGR7]
gi|219995037|gb|ACL71639.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 922
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 8/160 (5%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAE 110
+ A L A E ++ + + +A + G AA
Sbjct: 611 HASAQYDAADLLLAREDWTQAAQVLEGFRTRYPEHPLRLDATRKLAMAYGSAGQPDRAAG 670
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSS----YEEISKILQKLSEPSNPMHQFANE 166
+L++A+ P R A L AA + D + +++ P +P A +
Sbjct: 671 EYLRIASASDDPAEQRE-ALLLAADLYRDAGDRGREVAVLGDYVERFPSPLDP-AMDARQ 728
Query: 167 ILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQMI 205
L + L + + E + + D + + RS+ +
Sbjct: 729 RLLEAHLASNDANQVRRWREAIIRADAQAGSARTERSRFL 768
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 16/196 (8%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-------DNKL 86
+LA L + +G F+ A ++++ L+ +
Sbjct: 515 ALAATRLLERYPDAQPTQQLGAWVVIGHVAFDDGDYLHAERAYQQALASPVLEAERRPDM 574
Query: 87 YNPLSN--MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
+ L+ A + G+T A FL+V +A AA +L+ +
Sbjct: 575 ADRLAASVFRQAEVARDAGETDQAIVHFLRVPEGR-----FHASAQYDAADLLLAREDWT 629
Query: 145 EISKILQKLSE--PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202
+ +++L+ P +P+ A L ++ G+ +A + +A ++ P
Sbjct: 630 QAAQVLEGFRTRYPEHPLRLDATRKLAMAYGSAGQPDRAAGEYLRIASASDDPAEQREAL 689
Query: 203 QMILANIIASDQRNKK 218
+ + R ++
Sbjct: 690 LLAADLYRDAGDRGRE 705
>gi|195584118|ref|XP_002081862.1| GD25498 [Drosophila simulans]
gi|194193871|gb|EDX07447.1| GD25498 [Drosophila simulans]
Length = 868
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
QA L N+ ++A S+EK++ Y+ + ++++L +G + A + +
Sbjct: 444 QAECLRQLNRTNEAIQSYEKVVQLAPFCYD--ARFTLSALLKQQGRHEEAVQALEQPGEA 501
Query: 119 DLAPLAVR 126
+ PL R
Sbjct: 502 EGQPLIAR 509
>gi|118104344|ref|XP_424706.2| PREDICTED: similar to KIAA0372 [Gallus gallus]
Length = 1562
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 20/143 (13%)
Query: 59 QALELF-NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA- 116
A++L D A S ++ + N + ++ + G A
Sbjct: 531 AAVDLSVELGDTDTALSILNEVTEKANAGAAKWAWLHRGLYYLRTGQPSKAVADLQAALR 590
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP------MHQFANEILGI 170
D + P A V SY K +K + NP A E +
Sbjct: 591 ADRMDPNCWESLGE---AY--VSRGSYAAALKSFRK-ASELNPDHVYSIYRAAAVEQI-- 642
Query: 171 SALKFGKVQKAKTIFEELAKDNN 193
GK + A ++++ +
Sbjct: 643 ----LGKYENAIVTYQQILEKTE 661
>gi|332829914|gb|EGK02542.1| hypothetical protein HMPREF9455_00792 [Dysgonomonas gadei ATCC
BAA-286]
Length = 490
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
A + +A +++ +Y+ + L+++ + + LG++ + G +KAK FE
Sbjct: 412 EIAIVNSAGADIESKNYDAAIERLKRIEDKPIAWNN-----LGVAYMLKGDTKKAKEYFE 466
Query: 187 ELAKDNNSPFGISTRSQMILANIIASDQRN 216
+ A + ++ L + DQ N
Sbjct: 467 KSANRGD------KDAKANLEILQIVDQDN 490
>gi|255065786|ref|ZP_05317641.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256]
gi|255050104|gb|EET45568.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256]
Length = 504
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 32 ILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLS 91
I + + +++ KN+ +A L + K+ +A + + ++++ P+
Sbjct: 117 IAGIKVVLPIYEQWPGHDKNMA--LYAHGLVAQDEGKMKEAIGYYRQFIAENPNA--PVV 172
Query: 92 NMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+A+ L + AA+ F K+ + P +
Sbjct: 173 RWQLATALFEDKQNEAAADQFDKLKTEANLPEPL 206
>gi|195335129|ref|XP_002034228.1| GM20009 [Drosophila sechellia]
gi|194126198|gb|EDW48241.1| GM20009 [Drosophila sechellia]
Length = 868
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
QA L N+ ++A S+EK++ Y+ + ++++L +G + A + +
Sbjct: 444 QAECLRQLNRTNEAIQSYEKVVQLAPFCYD--ARFTLSALLKQQGRHEEAVQALEQPGEA 501
Query: 119 DLAPLAVR 126
+ PL R
Sbjct: 502 EGQPLIAR 509
>gi|161870757|ref|YP_001599930.1| hypothetical protein NMCC_1831 [Neisseria meningitidis 053442]
gi|161596310|gb|ABX73970.1| putative outer membrane protein OmpU [Neisseria meningitidis
053442]
gi|319411210|emb|CBY91615.1| conserved hypothetical TPR-containing periplasmic protein
[Neisseria meningitidis WUE 2594]
Length = 477
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 98 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFENR 155
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 156 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 191
>gi|149173495|ref|ZP_01852125.1| probable DNA-directed RNA polymerase alpha chain [Planctomyces
maris DSM 8797]
gi|148847677|gb|EDL62010.1| probable DNA-directed RNA polymerase alpha chain [Planctomyces
maris DSM 8797]
Length = 415
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 53/155 (34%), Gaps = 11/155 (7%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
+A L KLDDA S I + + I +GD A E F +
Sbjct: 101 RAETLRLVGKLDDAESVLGTISKDAAG--RAEYSFQMGCIRSDRGDLYGAIEYFER--AV 156
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
D+ P R A + A + E+ L + S S P + A LG+
Sbjct: 157 DMDPRHSR--AIFRLAGENASRGNDEDAI-RLYEQSLSSPPFYLGAILNLGLLYEDMENY 213
Query: 179 QKAKTIFEELAKDNNSPFGISTRSQMILANIIASD 213
A F + + + + M L +I A+D
Sbjct: 214 PAAAFCFRRILEA----DPTNEMAAMYLKDIEAAD 244
>gi|115461298|ref|NP_001054249.1| Os04g0675600 [Oryza sativa Japonica Group]
gi|38344930|emb|CAE54539.1| OSJNBa0018M05.21 [Oryza sativa Japonica Group]
gi|113565820|dbj|BAF16163.1| Os04g0675600 [Oryza sativa Japonica Group]
Length = 540
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 20/87 (22%)
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ A D A+R ++ + P+ + A L
Sbjct: 58 RLLDAFARDGDGDAALRVLRRMRHS----------------SPACAPTAASYTSAMSALA 101
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPF 196
K G+ A +F+++ + +P
Sbjct: 102 ----KAGRPADAAALFDDMLANGVAPD 124
>gi|21233644|ref|NP_639561.1| MFS transporter [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770609|ref|YP_245371.1| MFS transporter [Xanthomonas campestris pv. campestris str. 8004]
gi|188993843|ref|YP_001905853.1| MFS family tratrate or phthalate transporter [Xanthomonas
campestris pv. campestris str. B100]
gi|21115515|gb|AAM43443.1| MFS transporter [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575941|gb|AAY51351.1| MFS transporter [Xanthomonas campestris pv. campestris str. 8004]
gi|167735603|emb|CAP53821.1| MFS family tratrate or phthalate transporter [Xanthomonas
campestris pv. campestris]
Length = 461
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 17 GKCCYKWIAPLLIL--MILSLAIWFYLFDGSHEKKKNIVGE--NFAQALELFNSNKLDDA 72
G ++W+ L L ++L + +WF L DG + + GE +AL+ + K A
Sbjct: 206 GLAGWQWMFLLQGLPTVLLGVGVWFLLSDGVQQARWLTPGEKQALTRALDADEAGKPAGA 265
Query: 73 RSSFEKILSQ 82
+S +L
Sbjct: 266 STSLAAVLRN 275
>gi|307544813|ref|YP_003897292.1| hypothetical protein HELO_2223 [Halomonas elongata DSM 2581]
gi|307216837|emb|CBV42107.1| hypothetical protein HELO_2223 [Halomonas elongata DSM 2581]
Length = 323
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 33/121 (27%), Gaps = 10/121 (8%)
Query: 52 IVGENFAQALELFNS----NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
++ A+ + A ++ + + ++ + A GD
Sbjct: 198 PASDDVDSAIRAITDFESVQGAEAALPAWNALAERHPGS--AMARFAQGNARHASGDEDG 255
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
A F D A L +L + E L++ + P A E
Sbjct: 256 AIAAFRAATRSDSELAP----AWLNLGLLLKARGNIERARHALEQAATLPGPWQSRAREE 311
Query: 168 L 168
L
Sbjct: 312 L 312
>gi|189218837|ref|YP_001939478.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189185695|gb|ACD82880.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 771
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Query: 68 KLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
K +A S ++ L+ + M++AS L + K A +++ +V R
Sbjct: 413 KWAEAASLYKSFLTGYPHSKEVIPVKMHLASCLEKMEEKKEALKLWKEVLQALNKTDPER 472
Query: 127 YAATLQAASILVD----TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ D + + E + K+L + P +P A I+G + + + AK
Sbjct: 473 ETCLEHVGVLAFDLKEESLAAETMLKVLNEY--PHSPYRGIAAWIVGQHKYEEKQYEAAK 530
Query: 183 TIFEELAKDNNSPFGISTRSQMILANI 209
F LA++ P + + ++LA I
Sbjct: 531 EYFS-LAREAE-PEKLYLAATLMLAWI 555
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 7/155 (4%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-K 114
+A+ L+ + ++A F +IL Q + + +A G A I+
Sbjct: 37 ELDRAIALYRQGRYEEAIRVFYRILPQLSPGKKTEALFSMADCYRLIGKKAEAIRIYQLL 96
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP-MHQFANEILGISAL 173
+ ND A A +L + + + + L+ E +P Q A+ L + L
Sbjct: 97 IQNDPS--SAFVPTAYFWEGKLLSEQGDFAKAAPALKIAVEKGDPQTSQAASFFLALCQL 154
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGISTRSQMILAN 208
+ + +K EL + + +LA
Sbjct: 155 QTKEEEKGVYRLRELVDKA---PDLRVEAAGVLAT 186
>gi|170091998|ref|XP_001877221.1| activator of Hsp70 and Hsp90 chaperones [Laccaria bicolor
S238N-H82]
gi|164648714|gb|EDR12957.1| activator of Hsp70 and Hsp90 chaperones [Laccaria bicolor
S238N-H82]
Length = 580
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 19/151 (12%)
Query: 65 NSNKLDDARSSFEKILSQDN---KLYNPLSNM--YIASILVAKGDTKNAAEIFLKVANDD 119
D A + EK + + Y ++ I KGD +A + + K +
Sbjct: 303 EQGDYDKAIETCEKAVEEGRSIRADYKLIAKAYGRIGFAYQKKGDLGSAIKNYQKSLTEH 362
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
P + + E K + +P A G K G
Sbjct: 363 RTPDVLNKLREI-------------ERLKAEEDRKAYIDPERSAAAREEGNVKFKAGDFA 409
Query: 180 KAKTIFEE-LAKDNNSPFGISTRSQMILANI 209
A + E + +D + G + R+ + +
Sbjct: 410 GAVKDYAESIKRDPSDARGYNNRAAAYMKLV 440
>gi|86741190|ref|YP_481590.1| glycoside hydrolase 15-related [Frankia sp. CcI3]
gi|86568052|gb|ABD11861.1| glycoside hydrolase 15-related [Frankia sp. CcI3]
Length = 603
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 46/131 (35%), Gaps = 19/131 (14%)
Query: 72 ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATL 131
A + + + + L+ + A+ + ++++ + + +D A+ +
Sbjct: 426 ALAGVDGAGVGEADGWRALARRL---LSAAREEMRHSSGRWQRATDDPRVDAALL-LPAV 481
Query: 132 QAASILVDTSSYEEISKILQKLSEPSNPMH--QFANEI-------------LGISALKFG 176
+ A + D S + + ++L++ + L ++ + G
Sbjct: 482 RGAVDVRDPVSVATLRAVAEQLTDDGYVYRFDHAGIRLGVAEGAFLLCGFWLALAYHRAG 541
Query: 177 KVQKAKTIFEE 187
+ +A+ FE
Sbjct: 542 RHDQARRYFER 552
>gi|115358177|ref|YP_775315.1| TPR repeat-containing protein [Burkholderia ambifaria AMMD]
gi|115283465|gb|ABI88981.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
AMMD]
Length = 285
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 7/159 (4%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L++ + ++ +G A +LD+A + +L+ L PL+ + ++L
Sbjct: 95 LYEQARQQAPADLGPQLGLARVALRQRRLDEAAQRYRDLLAAQPNL--PLAAQGLGTVLD 152
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
+G +A ++ N +R L S+++ E ++ +L P P
Sbjct: 153 LQGRHADAQAVYRDALNAHPDAQGLRIDLGL---SLVLSNRPREGVNVLLDVAGLPDAPW 209
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
A + L + G AK + + +
Sbjct: 210 Q--ARQNLAFAYGVLGNTDSAKKLLSADLPASAVADNLR 246
>gi|317490867|ref|ZP_07949303.1| type IV pilus biogenesis/stability protein PilW [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316920414|gb|EFV41737.1| type IV pilus biogenesis/stability protein PilW [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 250
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 11/187 (5%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE 77
K +W+ LL + +L+ ++ + LE N L A+ + E
Sbjct: 2 KLKMRWVVGLLTVSLLAGCSSS---KPESQQTATVSQSRLQLGLEYLNQGDLKAAQQNLE 58
Query: 78 KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASIL 137
K Y + +A GD + A E + K N V + L
Sbjct: 59 KARDAAPDDYRT--QLGMALYQQRVGDNQAAQESYQKAMNLAPQNGTVMN----NYGAFL 112
Query: 138 VDTSSYEEISKILQKLSE-PSNPMHQFANEILGISALKFGKVQKAKTIFE-ELAKDNNSP 195
Y + + P + E G LK G+ ++A+ +F L D +
Sbjct: 113 CSLGQYVPAQQQFSSAANLPDYGQVADSFENAGYCFLKAGQTEEARKLFSRALKSDPDKG 172
Query: 196 FGISTRS 202
+ +
Sbjct: 173 VSLIAEA 179
>gi|302757876|ref|XP_002962361.1| hypothetical protein SELMODRAFT_438124 [Selaginella moellendorffii]
gi|300169222|gb|EFJ35824.1| hypothetical protein SELMODRAFT_438124 [Selaginella moellendorffii]
Length = 365
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Query: 79 ILSQDNKLYNPLSNMY--IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA--TLQAA 134
+ + N L + IA+ +G +A E+ V++++ A L VR +A L
Sbjct: 34 VKNSGPSAANALCKIQFAIANFHADQGKVSDATEVLHGVSSNESAGLEVRVSALEALVGL 93
Query: 135 SILVDTSSYEEIS-KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
+ + + + +L+ P + + + + G+ L G+ A + FE D
Sbjct: 94 YLQIHEDELASAQLQTISELATPESDIGPRSQALAGLVKLSGGQFDAAASCFEAFPPDTK 153
Query: 194 SPFGISTRSQMILANIIASDQRNK 217
I R+++ A++ +D+ K
Sbjct: 154 QGAAILARAEV--AHVRGADKEAK 175
>gi|240014934|ref|ZP_04721847.1| putative outer membrane protein OmpU [Neisseria gonorrhoeae DGI18]
gi|240122004|ref|ZP_04734966.1| putative outer membrane protein OmpU [Neisseria gonorrhoeae
PID24-1]
Length = 469
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ P M +A+ L
Sbjct: 90 YLQQAQQDKMLALYAQGILAQADGRVKEAVSHYRELIAAQPDA--PAVRMRLAAALFEDR 147
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 148 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 183
>gi|220909788|ref|YP_002485099.1| serine/threonine protein kinase [Cyanothece sp. PCC 7425]
gi|219866399|gb|ACL46738.1| serine/threonine protein kinase [Cyanothece sp. PCC 7425]
Length = 590
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 10/98 (10%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL---------SN 92
++ + + A +L KL +A + KI + + Y S
Sbjct: 401 QQLYNQAQSLAMNCQLDPAQDLARVGKLSEAIALLGKIPA-GQRGYQQAQQLMGQWSDSL 459
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAAT 130
+ A+ +GD A ++ + AA
Sbjct: 460 LAEAAEQYRRGDLNIALATLQQIPASSPVSKQAQEAAA 497
>gi|83815162|ref|YP_445705.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
gi|83756556|gb|ABC44669.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855]
Length = 1064
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 10/171 (5%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI- 79
++ L +L +L+ +++ + F A+EL+ DA ++F
Sbjct: 66 WRRFLLLCVLAGTALS------PARAQQEAPRPADAFGGAVELYQQQLYPDAATAFATFR 119
Query: 80 LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ + + P + A +A+GD + ++ + + R A L A +D
Sbjct: 120 QAHASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRAR-TARLGLAQYYLD 178
Query: 140 TSSYEEISKILQKLS-EPSNPMHQF-ANEILGISALKFGKVQKAKTIFEEL 188
+ + LQ ++ PS P A +LG + G A F+++
Sbjct: 179 QGNPDRAKSQLQTIATAPSRPDEGAQALYLLGRTEQNQGNPNAALPYFKQV 229
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 14/149 (9%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL------YNPLSNMYIASILVAKGD 104
G +A A F + + A SF + L ++ Y + + +A A
Sbjct: 569 QRAGARYALAWTYFKQRRFEPAARSFRRFLDVYDRDSMSDVPYRQDARLRLADCYFALKR 628
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQ 162
+A + +V D A + A Q L L++ + P +P+
Sbjct: 629 YDDARAAYDRV---DGAGVEY---ALYQGGRALYYAGQPGAARDRLRRFVDDFPDSPLRP 682
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD 191
A LG + + + A+ F +L D
Sbjct: 683 DALYRLGDIHFQEQRYEAARDAFTQLLDD 711
>gi|126640575|ref|YP_001083559.1| hypothetical protein A1S_0504 [Acinetobacter baumannii ATCC 17978]
Length = 210
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 8/165 (4%)
Query: 29 ILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNS-----NKLDDARSSFEKILSQD 83
IL+ L + + + Q ++ N+ N L +S +KI+ D
Sbjct: 5 ILIALIAFFGWEYWQKRNLATSQTETAKVQQLMDEANATADNPNALASITASADKIVKDD 64
Query: 84 NKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS 142
+ + +A + K D A + KV N + + L+ A + +
Sbjct: 65 IDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKVENSKVKDEGLIQVVKLRLADAQLAQNK 124
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
Y+E K L +P E+ G + + AK ++
Sbjct: 125 YDEALKTLSGDVDP--AFKATVEELRGDIFVAKKDIDSAKKAYQA 167
>gi|94971634|ref|YP_593682.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94553684|gb|ABF43608.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 1404
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+++ A KI + L ASI + D A + D
Sbjct: 398 AAKQQVEIAEQEISKINVEGPAKAEFL--RVRASIKASGEDYAGAEADLKEAQKLDPDNQ 455
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ TLQ A++L +E ++ + + +P +++A E LG A G A+
Sbjct: 456 LI----TLQYANLLWKAGRKDESKQMYLGILQ-GDPKNRYALEALGYLARDVGDTAGAEH 510
Query: 184 IFEELAK 190
F LA+
Sbjct: 511 YFTALAQ 517
>gi|313679180|ref|YP_004056919.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus
profundus DSM 14977]
gi|313151895|gb|ADR35746.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus
profundus DSM 14977]
Length = 927
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 9/110 (8%)
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
+G + F V +R L AA + + E ++++ ++ ++P
Sbjct: 593 RQGRFEEGRRWFEAVLA-RAEDGGLRAPFALAAAWLWIRLGDLEAAERLMEGVAVGADPA 651
Query: 161 HQFANEI-LGISALKFGKVQKAKT---IFEELAKDNNSP----FGISTRS 202
E G+ A + G A LA++ P + R+
Sbjct: 652 RNARLEQNRGMLAYRRGDFAAAAEHWGRAAALAREGADPWARTAALQNRA 701
>gi|290511888|ref|ZP_06551256.1| outer membrane autotransporter barrel domain-containing protein
[Klebsiella sp. 1_1_55]
gi|289775678|gb|EFD83678.1| outer membrane autotransporter barrel domain-containing protein
[Klebsiella sp. 1_1_55]
Length = 1342
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 18/162 (11%)
Query: 63 LFNSNKLDDARSSFE--------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
L NK +A++ + K+ + + A V+ G+ A +
Sbjct: 421 LREQNKSAEAQAMLQTLPQNLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPAGAIATLRE 480
Query: 115 VANDDLAPLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+R A +L + + E S ++ P A + A
Sbjct: 481 GVARYPDDPWLRLDLAR-----LLQKSGNGSEASSLMSAAYRPGAS--NNALYAAALFAS 533
Query: 174 KFGKVQKAKTIFEELAKDNNSP--FGISTRSQMILANIIASD 213
+ G Q+A+T+ + + + + R L A +
Sbjct: 534 ENGAWQQAQTLLARIPGGSQTSDMRDLRQRVNYNLQLATAEN 575
>gi|218439843|ref|YP_002378172.1| hypothetical protein PCC7424_2899 [Cyanothece sp. PCC 7424]
gi|218172571|gb|ACK71304.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 269
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 15/120 (12%)
Query: 68 KLDDARSSFEK---ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPL 123
KLD+A + F+K + Y + + A+G A E + +V + D P+
Sbjct: 88 KLDEAIADFDKAIELAPHTPDPY-----LNRGTAFEAQGRYDAAIEDYNRVLSLDPEDPM 142
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
A Q + + + K + P FA + ++ + G ++A
Sbjct: 143 AYNNRGNAQGGLGNWEEA-LADYQK-----ATEIAPNFAFAQANVALALYEMGNKEEATR 196
>gi|85090798|ref|XP_958590.1| hypothetical protein NCU09438 [Neurospora crassa OR74A]
gi|28919964|gb|EAA29354.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1444
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 38/163 (23%)
Query: 94 YIASILVAKGDTKNAAEIFLKVA-------NDDLAPLAVR-------YAATLQAASILVD 139
+A L G+T A I ++ +PLA++ A LQ ++ L +
Sbjct: 1120 LLALFLERTGETPRAISILDSLSTTLEQEYETTESPLALKHFAIVKSDLARLQLSARLFN 1179
Query: 140 TS-SYEEISKIL-------QKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+ +++ L + +E + A+ LG++ + A T F++ +
Sbjct: 1180 EAIDSADLALQLSSDESADELTAEERRKLRLSAHVTLGLAHYYSHDITAAVTAFDQALSE 1239
Query: 192 NNSPFGI----------------STRSQMILANIIASDQRNKK 218
+N+ + R + +L +IA + K+
Sbjct: 1240 SNTNPDVACLLAQILWATGQEDARERGRDLLFGVIADSEERKE 1282
>gi|328947410|ref|YP_004364747.1| hypothetical protein Tresu_0501 [Treponema succinifaciens DSM 2489]
gi|328447734|gb|AEB13450.1| hypothetical protein Tresu_0501 [Treponema succinifaciens DSM 2489]
Length = 961
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 16/161 (9%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
F+ F + K I F L+ + +A ++ + + Y S Y +
Sbjct: 519 GFFKFIAENSKSSKISFAEFYYGYSLYKMGESAEAFNALKNFSEK----YPESSLCYSSC 574
Query: 98 ILVAKGDTKNAAEIFL---KVANDDLA-----PLAVRYAATLQAASILVDTSSYEEISKI 149
I+ +A + F + A + + L ASI D+ Y++ K
Sbjct: 575 IVS----ANSALKNFDFENAIVQAKKALSFFSSQEEKENSVLLCASIYSDSEKYQDAIKF 630
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
L+ ++ ++ + + + GK+ +A IF E+
Sbjct: 631 LEPYAKNTSVFSIRCRYQIALLNSRIGKISEADKIFSEIQN 671
>gi|163754316|ref|ZP_02161438.1| hypothetical protein KAOT1_15513 [Kordia algicida OT-1]
gi|161325257|gb|EDP96584.1| hypothetical protein KAOT1_15513 [Kordia algicida OT-1]
Length = 270
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 13/133 (9%)
Query: 2 ESNNDANSYKGKCKMGKCCYKWIAPLLILM---------ILSLAIWFYLFDGSHEKKKNI 52
++ N+ S + +A ++ I + + D S
Sbjct: 91 QTENNTTSSGNRKSYFYYISSAVAIAAVMTMFYFTFMQSITATDAFEQYHDWSTLSSFQT 150
Query: 53 VGENF---AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
+ A LF K +A + FE+ +D Y+P ++YI + G+ A
Sbjct: 151 KSDTLNNLVNAENLFQQEKYQEALTIFEQSAKKDAI-YDPKKHLYIGISYLELGNYHEAL 209
Query: 110 EIFLKVANDDLAP 122
+ F + N D
Sbjct: 210 QTFDALLNSDALD 222
>gi|269103277|ref|ZP_06155974.1| hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163175|gb|EEZ41671.1| hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 251
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 8/186 (4%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
+ L L++ + + L + + A+ + + L
Sbjct: 4 WTMYPLLCGLLMGCVTVNENGGTTQEFNSTEAAEARITLGLGYLQAGQWQRAKENLDLAL 63
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
K Y + M A + A ++ K D V L
Sbjct: 64 KYAPKYYRAQNAM--AFYYQKVDENAKAEAMYKKALQDSPKNGDVLN----NYGVFLCSE 117
Query: 141 SSYEEISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKTIFEE-LAKDNNSPFGI 198
+ Y+E ++ + A+ E G+ ++K G +++A+ FE+ L D N P +
Sbjct: 118 ARYDEAINAFEQAIKQPYYYLTSASYENAGLCSVKKGDLKQARFFFEKSLTHDPNRPKSM 177
Query: 199 STRSQM 204
+Q+
Sbjct: 178 LQLAQL 183
>gi|254380999|ref|ZP_04996364.1| tetratricopeptide TPR4 [Streptomyces sp. Mg1]
gi|194339909|gb|EDX20875.1| tetratricopeptide TPR4 [Streptomyces sp. Mg1]
Length = 995
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 57/157 (36%), Gaps = 11/157 (7%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
++ G+ L L + ++ E +L + + P + ++ GD +
Sbjct: 703 RRAADAGDV-DALLNLAERRERAGDTAAAEVLLGRAVESGRPYALLHAGGRRERAGDPRG 761
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
A +F + A D P + A + + E + Q+++ +P+ F
Sbjct: 762 AEILFER-AADAGDPDGLLLLARDRKLA-----GDLEGAEALYQRVAATGSPLALF---Q 812
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
L G ++ A+ + + A D P + +++
Sbjct: 813 LVFMRGAAGDMEGAEALGQR-AADAGHPHALLQLARV 848
>gi|164685794|ref|ZP_01945909.2| tol-pal system protein YbgF [Coxiella burnetii 'MSU Goat Q177']
gi|165918370|ref|ZP_02218456.1| tol-pal system protein YbgF [Coxiella burnetii RSA 334]
gi|164601308|gb|EAX33415.2| tol-pal system protein YbgF [Coxiella burnetii 'MSU Goat Q177']
gi|165917876|gb|EDR36480.1| tol-pal system protein YbgF [Coxiella burnetii RSA 334]
Length = 300
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 54 GENFAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ QAL+L + D A++SF+ + N Y ++ ++ I + + D KNAA F
Sbjct: 171 SNTYRQALDLLTKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEF 230
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
V + V A L+ A I + ++ + L ++
Sbjct: 231 QTVRDKFPKSEKVLD-AKLKLAIIDAEDGKIKQAKEELTEI 270
>gi|17979432|gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
Length = 740
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 52/195 (26%)
Query: 30 LMILSLAIWFYLFDGSHEKKKNIVGENFAQALE----------------------LFNSN 67
+ IL+ +Y + G E K E F A L
Sbjct: 83 IAILNALGAYYSYLGKTETKNREKEEQFISATRYYNKASRIDMHEPSTWVGKGQLLLAKG 142
Query: 68 KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DLAPLAVR 126
++D+A +F+ +L L + AS+ +G + +++ + P AVR
Sbjct: 143 EIDNALQAFKIVLDTAPDNVPAL--LGQASVEFNRGRFSESLQLYKRALQVFPGCPAAVR 200
Query: 127 -----------YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
+ A V + + ++ LGI L+
Sbjct: 201 LGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALV----------------ALGIMDLQA 244
Query: 176 GKVQKAKTIFEELAK 190
+ + + +
Sbjct: 245 NDSIGMRKGMDRMQQ 259
>gi|322707153|gb|EFY98732.1| hypothetical protein MAA_05871 [Metarhizium anisopliae ARSEF 23]
Length = 339
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 136 ILVDTSSYEEISKILQKLS--EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+L+D + + +L K P + LG + LK GKV A+ +FE+LA++
Sbjct: 206 LLLDQGRLDAAAAVLTKALKLSPRFEWRPYCRLCLGRAYLKMGKVDDARGLFEKLAQEG 264
>gi|194212493|ref|XP_001494040.2| PREDICTED: toll-like receptor adaptor molecule 1 [Equus caballus]
Length = 712
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNK--LYNPLSNMYIASILVAKGDTKNAAE- 110
G A+ L + +AR S E + + + + M A L D A
Sbjct: 40 GAELLHAMVLLKLGQETEARISLEALKADAVARLVARRWAGMAGAEDLEEPPDLSWAVAR 99
Query: 111 IFLKVANDDLAPLAVRYAATLQA 133
++ ++ + L P +R A L A
Sbjct: 100 LYHLLSEEKLCPEPLRDVAYLAA 122
>gi|193215518|ref|YP_001996717.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088995|gb|ACF14270.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 323
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 17/138 (12%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA-----NDDL 120
S K D A+ FE + Y +N+ L AE+F + A ND++
Sbjct: 92 SGKNDLAKLRFESAEELNPSNYEAYNNI---GYLAFLDKNYERAELFYQKALQINPNDEI 148
Query: 121 APLAVRYAATLQAASILVDT-SSYEEISK--------ILQKLSEPSNPMHQFANEILGIS 171
A + Q + D YE+ L +P+ A L ++
Sbjct: 149 AQENLEILHRFQTGDLSWDAFGLYEKADNIENLEEKIRLYTELVEKSPLFYDAQNNLAVA 208
Query: 172 ALKFGKVQKAKTIFEELA 189
+ G+ +KA +F++L
Sbjct: 209 LFQAGEFEKALELFQQLT 226
>gi|196232464|ref|ZP_03131317.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428]
gi|196223536|gb|EDY18053.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428]
Length = 801
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 54/149 (36%), Gaps = 22/149 (14%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
Y+W+ ++ +++ + +LF + V +A + + K + A ++E
Sbjct: 343 YRWLIYTTAMLTVAVGVSGFLFRNQLLARFRPV-----EAKDTAQAAKKETAEMTYE--- 394
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
A L+AKGD K A E F + P + TL AA +
Sbjct: 395 --------------QARQLIAKGDVKQATEAFATLEARPDTPQPQKNWITLHAAIVDFLA 440
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILG 169
E + L+++ + A + L
Sbjct: 441 GRTESANGKLKQIVDRGKYSTDPAEDALA 469
>gi|115528225|gb|AAI24850.1| LOC431836 protein [Xenopus laevis]
Length = 508
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 9/101 (8%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY-AATLQAASILV-------DTSS 142
+ + +IL+ +GD + A + FL V + +Q V +
Sbjct: 120 ARLQRGNILLKQGDVQEARQDFLSVLQSSPNNEEAQSQLERVQEVERNVGGASEAYERRD 179
Query: 143 YEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
Y +L+K+ +P A E+ L+ G++ A
Sbjct: 180 YYGAIALLEKVI-EFSPWDPSARELRAECYLQVGELSNAVQ 219
>gi|327538062|gb|EGF24752.1| TPR repeat-containing protein [Rhodopirellula baltica WH47]
Length = 241
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 56/189 (29%), Gaps = 41/189 (21%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF---- 112
A + ++A FE+ D + +++ A + GD +A E +
Sbjct: 63 IETAKTVAAKGHAEEAIKLFERAEELDPTAASLDADL--APLYAEVGDHDSAIERYKLCV 120
Query: 113 ------------------------LKVANDDLAPLAVRYAATLQAASILVD--TSSYEEI 146
+A L++ +V + +
Sbjct: 121 QRTPDDAELINNYAWTLMEAGRFEQAIAEATSGVQKFPKDTRLRSTLAMVHYRNGDHAKS 180
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ + L+ H L + + G V A+ + +D + +R+ +++
Sbjct: 181 FQQWE-LAVGKTAAHHN----LALLDIDAGDVDSAREHLRQAKQDPE----LDSRANVLM 231
Query: 207 ANIIASDQR 215
A S Q+
Sbjct: 232 AAFETSSQK 240
>gi|300113468|ref|YP_003760043.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
watsonii C-113]
gi|299539405|gb|ADJ27722.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
watsonii C-113]
Length = 257
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 70/191 (36%), Gaps = 19/191 (9%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHE-----KKKNIVGENFAQALELFNSNKLDDARSSFEK 78
+ + + +L+LA +F + K+ N +E F +L+ A E+
Sbjct: 5 MIGVFTITLLALAGCASIFSSQEQVTPSIDKEKAAKINVQLGVEYFKQGELEQALKKLER 64
Query: 79 ILSQDN---KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135
+ QD YN ++ + G T+ A + F + D A A
Sbjct: 65 AIQQDPDIPSAYNAMALLKQ-----RLGQTEEAEKYFQRAIKLDPAYSE----AQNNYGV 115
Query: 136 ILVDTSSYEEISKI-LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNN 193
L + Y + L+ + P + A E G++A K + KA+ + + L +
Sbjct: 116 FLYNQGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKLAEFDKAERYYRKALQLEPR 175
Query: 194 SPFGISTRSQM 204
P + +++
Sbjct: 176 LPKSLYHMAEI 186
>gi|86747422|ref|YP_483918.1| thioredoxin [Rhodopseudomonas palustris HaA2]
gi|86570450|gb|ABD05007.1| thioredoxin [Rhodopseudomonas palustris HaA2]
Length = 306
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 31/151 (20%)
Query: 71 DARSSFEKILSQDNKLYNPLS-NMYIASILVAKGDTKNAAEIFLKVANDDLA-------- 121
+ EK+ + + + A ++A+GD + A I+ +V D A
Sbjct: 115 QVAAFIEKLTAGVPGGAPTAAELLQEAEAVMAEGDLQTAGAIYAEVLRADAANVEAIVGL 174
Query: 122 --------------------PLAVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNP 159
P A R A ++A ++D ++ E + +L ++P
Sbjct: 175 ARCYMVSGAVDEAKATLAQVPEARREDAAVKAVQAMIDLAAQAEQVGPIAELEQKVAADP 234
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ A L + G+ +A T E+ +
Sbjct: 235 LDHQARFDLATALNAAGRRDEATTHLLEIVR 265
>gi|325198995|gb|ADY94451.1| tetratricopeptide repeat protein [Neisseria meningitidis G2136]
gi|325203428|gb|ADY98881.1| tetratricopeptide repeat protein [Neisseria meningitidis
M01-240355]
Length = 470
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ P M +A+ L
Sbjct: 91 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDA--PAVRMRLAAALFENR 148
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 149 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 184
>gi|227551523|ref|ZP_03981572.1| possible penicillin-binding protein [Enterococcus faecium TX1330]
gi|227179305|gb|EEI60277.1| possible penicillin-binding protein [Enterococcus faecium TX1330]
Length = 404
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGE----NFAQALELFNS 66
K K GK +++I++ + ++ + E + GE F QAL +
Sbjct: 2 KRSDKHGKNRTGAYIAGAVILIVAASGGYFYYRHYQETQAVEAGEKTVEQFVQALNKGDY 61
Query: 67 NKLD 70
NK
Sbjct: 62 NKAA 65
>gi|124266418|ref|YP_001020422.1| hypothetical protein Mpe_A1225 [Methylibium petroleiphilum PM1]
gi|124259193|gb|ABM94187.1| hypothetical protein Mpe_A1225 [Methylibium petroleiphilum PM1]
Length = 941
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 26/186 (13%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKI-------LSQDNKLYNPL 90
W+ + S + NF A L+ + +A + +EK + Y L
Sbjct: 407 WYRSWLESFPTDPDAAANNFLLAELLYEDARHAEAVTEYEKTAYQYPPHAKSADAGYAAL 466
Query: 91 ---SNMYIASILVAKGDTKNA--------AEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ + + + + A A+ F D + AA L D
Sbjct: 467 LGHAQLEKKAPAAERPALQRAAVASALQFAKAFDG---DPRVGPVLSNAAE--KLYALGD 521
Query: 140 TSSYEEISKILQKLSEPSNP-MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+++ + L P+ + A +L +A + G +A+ + E+ +P
Sbjct: 522 AEPAAGVAQQVLDLKPPAAAEQRRVAWTVLAHTAFEQGAFDRAERGYGEVI--ALTPEKA 579
Query: 199 STRSQM 204
R ++
Sbjct: 580 PGRGEL 585
>gi|150020703|ref|YP_001306057.1| TPR repeat-containing protein [Thermosipho melanesiensis BI429]
gi|149793224|gb|ABR30672.1| TPR repeat-containing protein [Thermosipho melanesiensis BI429]
Length = 139
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQD-NKLYNPLSNMYIASILVAKGDTKNAAEIF 112
E +A+EL + K D+A +++++ QD + YN L N+Y KG A E +
Sbjct: 2 ERLLKAIELTKNGKFDEAEKIYKELVKQDIPEAYNNLGNIYR-----KKGLIARAIECY 55
>gi|94501766|ref|ZP_01308279.1| protein containing tetratricopeptide repeats [Oceanobacter sp.
RED65]
gi|94426074|gb|EAT11069.1| protein containing tetratricopeptide repeats [Oceanobacter sp.
RED65]
Length = 574
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 13/156 (8%)
Query: 67 NKLDDARSSFEKILSQD-NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA- 124
D+A+S F+ +L +D + + Y+A + KG AA+ ++ +
Sbjct: 82 GLPDEAQSIFKDLLDKDVSPETRNKAWYYLAKLYYNKGQASEAAKALARIKGTMPEDVVE 141
Query: 125 -VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
Y ATL ++ D E + L+K S P P F L + L+ G KA++
Sbjct: 142 EFNYLATL--INMHFDHLENAERAINLKKSSNPYEPYLLF---NLAVKQLQRGDDAKARS 196
Query: 184 IFEELAKDNNSPFG-----ISTRSQMILANIIASDQ 214
+ E+ ++ R++ LA+I DQ
Sbjct: 197 LLNEVVGYTKINPKEEFAVLADRAKQALAHIHIQDQ 232
>gi|93005484|ref|YP_579921.1| hypothetical protein Pcryo_0654 [Psychrobacter cryohalolentis K5]
gi|92393162|gb|ABE74437.1| conserved hypothetical protein [Psychrobacter cryohalolentis K5]
Length = 264
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 59/186 (31%), Gaps = 24/186 (12%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLD--------DA 72
Y IL+ L+ + + +H + + + +A L L +A
Sbjct: 20 YGSYIVTAILLALAAYFGWTYWQDNHARVDTVAADQYADIQRLNEEVSLASQNPDLGAEA 79
Query: 73 RSSFEK------------ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
++S EK + + +Y + M A V D K A + F K DL
Sbjct: 80 KASLEKSRTQLDKNIDTLVGTHGESVYAWQALMIKARQQVDNDDFKAAGDTFKKALAIDL 139
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS-NPMHQFANEILGISALKFGKVQ 179
+ L+ A+ L+ + L + S + E+LG L
Sbjct: 140 GDAGLEAITRLRYATTLLAAG---DAKAALTEASRDMPSSFEASQQELLGDIYLAQDNSD 196
Query: 180 KAKTIF 185
A +
Sbjct: 197 SAIKSY 202
>gi|222053598|ref|YP_002535960.1| hypothetical protein [Geobacter sp. FRC-32]
gi|221562887|gb|ACM18859.1| TPR repeat-containing protein [Geobacter sp. FRC-32]
Length = 709
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 55/169 (32%), Gaps = 7/169 (4%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-DNKLYNPLSN 92
+L + F A + L D R ++++Q K Y PL
Sbjct: 251 ALNAFREGEQRWPAYMAFNPATTFYFADSIARMGNLADGRKMLARLIAQLAEKTYAPLLL 310
Query: 93 MYIASILVAKGDTKNAAEIFLKVA----NDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
+A IL G K A IF +A + A A+ A + S+ DT
Sbjct: 311 DRLADILARNGRDKEAVAIFGTIAEGFPETEAAYHALLKLADRRLFSVSADTYQPLAEQY 370
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
+ + + AN + +G+ KA + + + P G
Sbjct: 371 RSIHRAAGAVSLRDDANFKAALMESLYGQADKA--LAAVIQYEKQYPQG 417
>gi|163939998|ref|YP_001644882.1| TPR repeat-containing protein [Bacillus weihenstephanensis KBAB4]
gi|163862195|gb|ABY43254.1| TPR repeat-containing protein [Bacillus weihenstephanensis KBAB4]
Length = 891
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 10/142 (7%)
Query: 57 FAQALELFNSNKLDDARSSFE-KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
QA + ++ K A + I + + + +A+I VA+G K A + K+
Sbjct: 537 MEQARQAYHDKKYTKAEEAVGHAIAVKG----KDEAYLQLATIYVAEGKNKIAIDYITKL 592
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEE----ISKILQKLSEPSNPMHQFANEILGIS 171
D AA L A++ Y+E + L ++ P + A L +S
Sbjct: 593 IKDREIDKENNEAAYLLASA-NFRIGKYQEAVLNFEQALANNAKGIEPYKKDAMRDLAVS 651
Query: 172 ALKFGKVQKAKTIFEELAKDNN 193
+K + +KA+ + +++ N
Sbjct: 652 HMKMKEFEKAEDVIVKMSTKTN 673
>gi|121997016|ref|YP_001001803.1| hypothetical protein Hhal_0207 [Halorhodospira halophila SL1]
gi|121588421|gb|ABM61001.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila
SL1]
Length = 796
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 32/97 (32%), Gaps = 6/97 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ A L N L +A +++ ++ + + +A + +GD A + + +A
Sbjct: 288 YLLAEVLIARNALAEAEEQLQQVATRFPDA--TEARLNLARLASWQGDYDRALDHYDALA 345
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+ A A ++ + L
Sbjct: 346 AEHPTDPTFPLEAARLAGW----AGEPDQARERYATL 378
>gi|325138995|gb|EGC61543.1| tetratricopeptide repeat protein [Neisseria meningitidis ES14902]
Length = 488
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFDNR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|254669959|emb|CBA04601.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 477
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ P M +A+ L
Sbjct: 98 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDA--PAVRMRLAAALFENR 155
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 156 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 191
>gi|325130933|gb|EGC53661.1| tetratricopeptide repeat protein [Neisseria meningitidis
OX99.30304]
gi|325134992|gb|EGC57622.1| tetratricopeptide repeat protein [Neisseria meningitidis M13399]
Length = 488
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFDNR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|320096186|ref|ZP_08027776.1| hypothetical protein HMPREF9005_2388 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319976879|gb|EFW08632.1| hypothetical protein HMPREF9005_2388 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 238
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 64/176 (36%), Gaps = 23/176 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQ------DNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
A + +L +A FE++++ + + S +A + G A ++
Sbjct: 9 AYAYQAAGRLGEAIPLFEEVVADCVRVLGADHPHALASRNGLAGAYESAGRLGEAIPLYE 68
Query: 114 KVANDD------LAPLAV---RYAATLQAASILVDTSS--YEEISKILQKLSEPSNPMHQ 162
V D P + A ++ +D + YE + +++ +P
Sbjct: 69 GVLADTRRVLGPDHPDTLTSRNNLAGAYESAGRLDEAITLYEGVLADTRRVLGDDHPDTL 128
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMILANIIAS 212
+ L + G++ +A ++E + D ++ P +++R+ + A A
Sbjct: 129 TSRNNLAYAYYSAGRLGEAIPLYEGVVADRRRVLGDDHPDTLTSRNNLAAAYQAAG 184
>gi|149018726|gb|EDL77367.1| rCG25979 [Rattus norvegicus]
Length = 544
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 65/190 (34%), Gaps = 25/190 (13%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K+ + + ++L+ + + + ++ + + L + A + +
Sbjct: 122 YWQFVGKDKSAMATEYFESLKQYENCEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 181
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEP 156
+ + EI + A D P + L + S Y++ +I +
Sbjct: 182 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFSDAEQLYKQALEISENAYGA 235
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE--LAKDNNSPFG--------ISTRSQM 204
+P A E+ ++ K K ++A+ ++ + + + + R+
Sbjct: 236 DHP--HAARELEALATLYHKQNKYEQAERFRKKSVIIRQQATRRKGSLYGFALLRRRALQ 293
Query: 205 ILANIIASDQ 214
+ + D+
Sbjct: 294 LEELTLGKDK 303
>gi|332304811|ref|YP_004432662.1| HemY domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172140|gb|AEE21394.1| HemY domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 393
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 9/96 (9%)
Query: 17 GKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSF 76
G + W+ LI++I W + +K+ F L +AR
Sbjct: 54 GLLLFSWLVKKLIMIISGSKNWLGNWGTRKKKRA------FTNGLIALAEQDYLEARKQL 107
Query: 77 EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
I +D N L+ A + + + A E +
Sbjct: 108 ASIEQEDFDGLNLLA---AAEAELQLQNPEGAQEYW 140
>gi|327541184|gb|EGF27728.1| repeat protein [Rhodopirellula baltica WH47]
Length = 1113
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 3/140 (2%)
Query: 57 FAQALELFNSNKLDDARSSFEKI-LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+A+ + L D A+SS++++ + + + + + + +G+ +NA E F V
Sbjct: 212 YARGVALEEQKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDMHLLQGEMQNAVERFDSV 271
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISAL 173
A + A + + + + S +KL P +P A +
Sbjct: 272 ATNADATAEDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLY 331
Query: 174 KFGKVQKAKTIFEELAKDNN 193
+ G + A + F ++ + +
Sbjct: 332 QAGDLPGAASRFRDVLQGTD 351
>gi|300726276|ref|ZP_07059729.1| putative tetratricopeptide repeat domain protein [Prevotella
bryantii B14]
gi|299776473|gb|EFI73030.1| putative tetratricopeptide repeat domain protein [Prevotella
bryantii B14]
Length = 589
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
++M ++I + ++ ++ +IF P A L+AA + + + ++K L
Sbjct: 291 ASMLRSAIQKNEQESGDSTKIFHLFDLALSVPQTNGDLAELKAAYMSLKKMPEDSLNKAL 350
Query: 151 QKLSEPSNPMHQFANEILGISALKFGKVQK 180
+K+ P + A + S K
Sbjct: 351 EKVL-EIAPDNAGARIQIIQSYWAKKDFDK 379
>gi|207728288|ref|YP_002256682.1| hemin-binding outer membrane protein [Ralstonia solanacearum MolK2]
gi|206591534|emb|CAQ57146.1| hemin-binding outer membrane protein [Ralstonia solanacearum MolK2]
Length = 659
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L + ++ DA +E + + + AA + + D
Sbjct: 144 VALASRGRMKDATQRYEAM--SQAGKVPAYTRVSAGDAYAYLDKPDRAAAAYTQALKDAG 201
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
+DT YE+ +L K+ + + A E
Sbjct: 202 PGEIETGDVQEGLFYADLDTGRYEDARALLDKMKADNPEYVRLAPEA 248
>gi|110635601|ref|YP_675809.1| thioredoxin [Mesorhizobium sp. BNC1]
gi|110286585|gb|ABG64644.1| thioredoxin [Chelativorans sp. BNC1]
Length = 326
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 14/143 (9%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
A + +L Q+ + + L+ + A +L G T A + +V + A
Sbjct: 168 GDSQMAAQIYSAVLQQEPEQVDALAGL--ADLLFEAGQTDEARSLLDQVPDAKKNAAA-- 223
Query: 127 YAATLQAASILVDT----SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
AT++A L + + E+ + L SNP A L + GK +A
Sbjct: 224 -VATVRAKMALAEQVAGLGNPAELQQRLA-----SNPDDHQARFDLALILNAQGKRAEAA 277
Query: 183 TIFEELAKDNNSPFGISTRSQMI 205
+ K + S + R +++
Sbjct: 278 DNLLAIIKADRSWNDDAARGKLL 300
>gi|256395863|ref|YP_003117427.1| hypothetical protein Caci_6741 [Catenulispora acidiphila DSM 44928]
gi|256362089|gb|ACU75586.1| Tetratricopeptide TPR_2 repeat protein [Catenulispora acidiphila
DSM 44928]
Length = 1478
Score = 36.1 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 4/100 (4%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ + +A + G A + D A A ++ ++L+ +E +L
Sbjct: 317 ARLGLALLREQSGRPAEAIAHYQAALRHDAHSRA----ARIRLGAVLLAAGRRKEAQGLL 372
Query: 151 QKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ S S+ A G++ L+ A ++ L
Sbjct: 373 EPESGQSSYWGGMATFHYGLAQLRANNPAGAIDTWDRLGT 412
>gi|322432939|ref|YP_004210188.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9]
gi|321165166|gb|ADW70870.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
sp. MP5ACTX9]
Length = 1115
Score = 36.1 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 18/161 (11%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMY----IASILVAKGDTKNAAEIFLKVANDDL 120
K D A ++++ ++ K + + + +A++ ++G K A +
Sbjct: 401 EVGKADLAEDAYQQAVTSAKKASDTAALLEITSELAALERSQGKLKAAHTAYDSGIALSG 460
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQK------------LSEPSNPMHQFANEIL 168
+ R A LQ+ L + + I Q + +N A L
Sbjct: 461 SSKLSREAVLLQSGLALTLAAEKKPREGIQQAGQAAALAQSIGYVEGEANATRDLAQLYL 520
Query: 169 GISALKFGKVQ--KAKTIFEELAKDNNSPFGISTRSQMILA 207
G+ LK + A ++E + + ++ +++ +A
Sbjct: 521 GLKDLKSARADYSHAAQLYEGIQDRVQTAHALAQLARIDVA 561
>gi|47124915|gb|AAH70700.1| LOC431836 protein [Xenopus laevis]
Length = 505
Score = 36.1 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 9/101 (8%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY-AATLQAASILVDTSSYEEISKI 149
+ + +IL+ +GD + A + FL V + +Q V + E +
Sbjct: 117 ARLQRGNILLKQGDVQEARQDFLSVLQSSPNNEEAQSQLERVQEVERNV-GGASEAYERR 175
Query: 150 -------LQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
L + +P A E+ L+ G++ A
Sbjct: 176 DYYGAIALLEKVIEFSPWDPSARELRAECYLQVGELSNAVQ 216
>gi|186478661|ref|NP_564088.2| NFD5 (NUCLEAR FUSION DEFECTIVE 5) [Arabidopsis thaliana]
gi|8778424|gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana]
gi|332191742|gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 725
Score = 36.1 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL--VAKGDTKNAAEIFLKVANDDLA 121
S + A +FE + S P +Y A IL V G K + ++ +L
Sbjct: 430 SKSGNFERATEAFENLKSY---GLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELK 486
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
Y A L+A + + D + IS +Q S P+ A + + K G+V KA
Sbjct: 487 ASEEVYMALLRAYAQMGDANGAAGISSSMQYAS--DGPLSFEAYSLFVEAYGKAGQVDKA 544
Query: 182 KTIFEELAKDNNSPFG 197
K+ F+E+ K + P
Sbjct: 545 KSNFDEMRKLGHKPDD 560
>gi|325205391|gb|ADZ00844.1| tetratricopeptide repeat protein [Neisseria meningitidis
M04-240196]
Length = 488
Score = 36.1 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQTDGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFDNR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|254430727|ref|ZP_05044430.1| TPR repeat containing Spindly family protein [Cyanobium sp. PCC
7001]
gi|197625180|gb|EDY37739.1| TPR repeat containing Spindly family protein [Cyanobium sp. PCC
7001]
Length = 1107
Score = 36.1 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 10/137 (7%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVAND 118
AL L + + ++A ++ +L + + +A++L ++ A E F L +
Sbjct: 429 ALGLIEAGRPEEAEATLRLLLRDQPSWHQ--AAFQLANLLRSQRREAEAVEAFRLCLQFA 486
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
P A Q A D E I+ Q LS + + L S ++ +
Sbjct: 487 PAFPDAWNNLGLAQEALGQRD----EAIAYYRQALSIDAG-FRPS-RQNLAQSLVRQRRH 540
Query: 179 QKAKTIFEE-LAKDNNS 194
++A F LA D +
Sbjct: 541 EEALEEFGRFLALDLDV 557
>gi|124516317|gb|EAY57825.1| putative TPR-domain containing protein [Leptospirillum rubarum]
Length = 719
Score = 36.1 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 14/134 (10%)
Query: 83 DNKLYNPLSNMYIASILVAKGDTKNA------AEIFLKVANDDLAPLAVRYAATLQAASI 136
D+ L +++ I +GDT A A +FL D A+ + +
Sbjct: 578 DDSSGRTLVRLFV--IDREEGDTARAERDANLARVFLDDTRDPDDRKALGNL-LYRWGKM 634
Query: 137 LVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN-- 192
D E ++L+ + P +P +A LG AL G +KA+ F ++A+D
Sbjct: 635 ERDLHHPERAYRLLEAFQKTFPEDPRRGWAIYQLGNLALVLGDPEKARQWFLKVARDQSG 694
Query: 193 -NSPFGISTRSQMI 205
+ R+Q I
Sbjct: 695 SSLGRVARERAQGI 708
>gi|39997603|ref|NP_953554.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39984495|gb|AAR35881.1| TPR domain protein [Geobacter sulfurreducens PCA]
Length = 559
Score = 36.1 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 52/172 (30%), Gaps = 10/172 (5%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNK-LDDARSSF 76
+ Y A ++ L + G+ + AL N+ D S F
Sbjct: 363 RFMYLPAAGFCLVAGAVLGGPLFDRWGARVGWGVVGSITLLLALVAVERNRDWRDDVSLF 422
Query: 77 EKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPLAVRYAATLQAAS 135
++ D + + S L+ +GDT A + V D A+ TL A
Sbjct: 423 ASVVETDPRSAE--GYFNLGSALIERGDTAGARAAWERAVGIDPRHSGALAQLGTLAARQ 480
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ +NP + A LG G+ +A +E
Sbjct: 481 -----GDLAGAKARY-LAAVEANPANVMARYNLGRIYEMQGEPARAAEQYEL 526
>gi|304312646|ref|YP_003812244.1| hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1]
gi|301798379|emb|CBL46603.1| Hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1]
Length = 1047
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 67 NKLDDARSSFEKILS--QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+D A + E++ + DN + A + KG+ K A ++ ++ + P A
Sbjct: 787 GNIDGAAHALEQVATLNADNPELANQALTQAAEMQAKKGNRKEAIRLYSELEGNSKIPPA 846
Query: 125 VRYAATLQAASILVDTSS 142
R + A++ D
Sbjct: 847 ERIELQHKLATLAADEGD 864
>gi|258591282|emb|CBE67579.1| putative TPR domain protein [NC10 bacterium 'Dutch sediment']
Length = 585
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
+A++ + A ++ + + D L +RY + ++ E+ S I +++
Sbjct: 162 QLAALYREARKAQEAIAVYRQALDVDPGSLVIRY----NLGRLYLEEGQSEQASHIFREI 217
Query: 154 SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR-SQMIL 206
E + A LG+S GK+ +A+T+++ D+ I R +Q++L
Sbjct: 218 LERDSAFDP-ALTALGMSLEAQGKLDEARTMYQRALVDDPRNGEIRERLAQLLL 270
>gi|295699207|ref|YP_003607100.1| cellulose synthase operon C domain protein [Burkholderia sp.
CCGE1002]
gi|295438420|gb|ADG17589.1| cellulose synthase operon C domain protein [Burkholderia sp.
CCGE1002]
Length = 1550
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 66/171 (38%), Gaps = 18/171 (10%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVA 116
++A+ ++ + A++ FE+ ++ + + + + + +L+ GD A + + +
Sbjct: 371 SEAIGARSNGEFAKAKALFERAIALNPS--DVTAQVQLGEMLLQTGDPAGAEQAYRMALR 428
Query: 117 NDDLAPLAVRYAATLQAASILVDTSS--YEEISKILQKLSEPSNPMHQFANEILGISALK 174
P A+R AA D + +++ Q + + A +A
Sbjct: 429 RQADNPDAIRGLVGALAAQGRADEALQFANQLNAEQQAKVGGIDRLRGEAQAAQARAAEA 488
Query: 175 FGKVQKAKTIF-EELAKDNNSP------------FGISTRSQMILANIIAS 212
G + A+++F + L + P G ++ ++ ++A+
Sbjct: 489 RGDLGTARSLFEDALLNKPDDPWLRLDLARIYVRQGAVANARSMMDGLLAT 539
>gi|332524931|ref|ZP_08401117.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
gi|332108226|gb|EGJ09450.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2]
Length = 925
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 73/197 (37%), Gaps = 17/197 (8%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELF------NSNKLDDARSSFEK 78
AP+ L+ LSLA+ + D + + + A + A +
Sbjct: 405 APMRGLLGLSLAVGGRVPDALDALEASFKADPKQLATGTALAQIRLQAGDTRRATQVLQT 464
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+L K L+ + A GD A + F + D A ++ + +Q A +
Sbjct: 465 LLQHHPKQAGLLNLLGSA--KARGGDAAGARQAFEQALVVDPAFVSPQ----VQLARLDA 518
Query: 139 DTSSYEEISKILQK-LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
D ++ + LQ+ L++ + + A + G++ A+ +E+ D+ +
Sbjct: 519 DAGKFDAAQQRLQQALAKDDKALEPTL--AMAQLAERRGRLDDARRWYEK--ADDIAGPN 574
Query: 198 ISTRSQMILANIIASDQ 214
+ + ++ ++ Q
Sbjct: 575 VIDPALELVEFLLRQGQ 591
>gi|325300114|ref|YP_004260031.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
salanitronis DSM 18170]
gi|324319667|gb|ADY37558.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
salanitronis DSM 18170]
Length = 1003
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 8/173 (4%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL--- 90
A+ Y+ + + +ALE ++ + + L +KL +
Sbjct: 821 GKALSLYVRIADRAASQEERVDALCRALECARLSENPEEILALASSLLSQSKLAPEVENE 880
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ A + +G T+ A +A D A A DT E+ K +
Sbjct: 881 ARYARAKACIGEGKTQEAVGDLTLLAKDTR--NEYGAEAKYLLAQFYFDTGETEKAEKEV 938
Query: 151 QKLSEPSNP-MHQFANEILGIS--ALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ S P + A + +S +K G+ AK L ++ + I
Sbjct: 939 LDYIDASTPHAYWLARSFVLLSDIYMKMGRDVDAKQYLLSLKQNYQADDDIQE 991
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 4/148 (2%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+ V ++ L +N +A + +K+L+ + ++ + A I + +
Sbjct: 763 QGAFSVNASYYLGLMAYNEKNYTEASAYLDKVLAYPDNKFSGEAMKLCAGIAYQEKEYGK 822
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN---PMHQFA 164
A +++++A D A R A +A + + EEI + L S + A
Sbjct: 823 ALSLYVRIA-DRAASQEERVDALCRALECARLSENPEEILALASSLLSQSKLAPEVENEA 881
Query: 165 NEILGISALKFGKVQKAKTIFEELAKDN 192
+ + GK Q+A LAKD
Sbjct: 882 RYARAKACIGEGKTQEAVGDLTLLAKDT 909
>gi|313677805|ref|YP_004055801.1| hypothetical protein Ftrac_3726 [Marivirga tractuosa DSM 4126]
gi|312944503|gb|ADR23693.1| hypothetical protein Ftrac_3726 [Marivirga tractuosa DSM 4126]
Length = 240
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 9 SYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGS-------------HEKKKNIVGE 55
+Y K K + +A +IL++ ++F + + S H +++I GE
Sbjct: 72 NYFVTRKKAKFAWVKMAVAA-SIILAIGLYFLIGEMSKPQYQEIAQIPTIHLTERSIDGE 130
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK- 114
+ +A FN + +A F++IL++D++ + + +Y A G T+ A ++ +
Sbjct: 131 IYTKAENAFNQEQYSEAIKMFDQILNEDSQNQSIM--LYKAIAHTENGATEKARMLYEEL 188
Query: 115 VANDDL 120
+ ND+
Sbjct: 189 IQNDNA 194
>gi|237797508|ref|ZP_04585969.1| thioredoxin [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020358|gb|EGI00415.1| thioredoxin [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 290
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQALFAESRFSEAEAVLKLLLGEDNTNAAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATLQ---AASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
V D+ A L A+ L D E+ L + + HQ A + L
Sbjct: 177 LDAVTGDEHKAELAGAKAQLTFLAEAATLPDA---AELKSRLTQNPQDDEAAHQLAIQQL 233
Query: 169 GISALKF 175
+
Sbjct: 234 SRQQYEA 240
>gi|189208243|ref|XP_001940455.1| heat shock protein STI1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976548|gb|EDU43174.1| heat shock protein STI1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 576
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 71 DARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAAT 130
+A +IL+ + + + A + GD +NA + + K + P + A
Sbjct: 311 EAVEYGREILADFKIIAKAFARIGTAYEKM--GDLENAIKYYQKAQTEHRTPEVL---AK 365
Query: 131 LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF-EELA 189
L+AA +I K + P A E LG + K A + E +
Sbjct: 366 LRAA-------EKAKIQKDREAYINPEEAEK--ARE-LGNAKFKESDWPAAVEAYSEMIK 415
Query: 190 KDNNSPFGISTRS 202
+ + P G S R+
Sbjct: 416 RAPDDPRGYSNRA 428
>gi|126731007|ref|ZP_01746815.1| Conserved protein containing sulfotransfer domain [Sagittula
stellata E-37]
gi|126708309|gb|EBA07367.1| Conserved protein containing sulfotransfer domain [Sagittula
stellata E-37]
Length = 486
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 7/140 (5%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ FAQA + +++ ++A + +L P +A L GDT +A+
Sbjct: 4 QQMKAQFAQAQAMIRTDRPEEALALLTPLLM--PSGGAPEIRFQMARALDLIGDTDASAK 61
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
V +VR A ++A + L +E+ + L + ++P
Sbjct: 62 ALDDVLKARPGEASVRE-AAIRAHTRL----GHEDRVRTLYDEAIRADPKAIKPRADKAQ 116
Query: 171 SALKFGKVQKAKTIFEELAK 190
+ G A+TI L K
Sbjct: 117 YLQQIGDFDGAETILRRLLK 136
>gi|297170600|gb|ADI21626.1| hypothetical protein [uncultured myxobacterium HF0130_06F04]
Length = 935
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 14/153 (9%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILS-----QDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ A+ KLDDA F+++ + LS++ I + +G + +
Sbjct: 222 KYMAAVAQVQLGKLDDALQRFQQLTQLEGNYEALSEIRELSHLNQGRIYLEQGKLTASQD 281
Query: 111 IFLKVANDDLAPLAVRYAAT---LQAASILVDT----SSYEEISKILQKLSEP--SNPMH 161
+ +A Y AT ++ A++ D + Y++ L+ L +
Sbjct: 282 AYQNIARSSQFFEQAMYEATWVHIRGAALAGDDYQRVAEYQKALNALEILLVGVSDEKIG 341
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
A ++G L G+ +A FEE+ + +
Sbjct: 342 SEARILVGNIYLWMGRHMEASEAFEEVVERYQA 374
>gi|4206707|gb|AAD11779.1| putative outer membrane protein OmpU [Neisseria meningitidis]
gi|261391840|emb|CAX49299.1| conserved hypothetical TPR-containing periplasmic protein
[Neisseria meningitidis 8013]
Length = 488
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ P M +A+ L
Sbjct: 109 YLQQAQQDKMLALYAQGILAQTDGRVKEAISHYRELIAAQPDA--PAVRMRLAAALFDNR 166
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 167 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 202
>gi|56461214|ref|YP_156495.1| TPR repeat-containing protein [Idiomarina loihiensis L2TR]
gi|56180224|gb|AAV82946.1| TPR repeats containing protein [Idiomarina loihiensis L2TR]
Length = 417
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 56/149 (37%), Gaps = 8/149 (5%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNK--LY-NPLSNMYIASILVAKGDTKNAAEIF 112
A+A E ++ L + S ++ + + Y + + + +G+TK A F
Sbjct: 39 QLARAQEQADNGNLAEGISILGEVAEKADSMNSYERAMMWNFYGFMYYEQGNTKEAINYF 98
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL---QKLSEPSNPMHQFANEILG 169
KV + P ++ + A + + ++ L + L+E A +
Sbjct: 99 EKVVKESPIPESLEKSTLYSLAQLALSDGQFQRAISFLDQWEGLAEEGE--MGKAWVLKA 156
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGI 198
+ + K Q+A ++ ++ ++ I
Sbjct: 157 QAYYQADKYQEALSLIDKAIAAVDAENKI 185
>gi|290511899|ref|ZP_06551267.1| cellulose synthase subunit BcsC [Klebsiella sp. 1_1_55]
gi|289775689|gb|EFD83689.1| cellulose synthase subunit BcsC [Klebsiella sp. 1_1_55]
Length = 1159
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)
Query: 41 LFDGSHEKKKNIVGENFA-QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
D E + + + QA +L +S A + ++ + ++ +A
Sbjct: 561 WTDNIRELEARLQSDRVLRQANQLRDSGNEAQAIALIQQQPAS------VRYDLTLADWA 614
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE-PSN 158
+GD++ A + +V + A L A + + + + +L +
Sbjct: 615 QQRGDSQTAIADYQRVLRQEADNGD----ARLGLAEVYLAEGDKQAARAQVMQLKGAETE 670
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
M+ L + L G A+ IF ++ + + ++
Sbjct: 671 SMNMQRRVALARAGL--GDTADAQQIFNQIVPQAKAQPPSMESALVL 715
>gi|288933105|ref|YP_003437164.1| cellulose synthase operon C domain protein [Klebsiella variicola
At-22]
gi|288887834|gb|ADC56152.1| cellulose synthase operon C domain protein [Klebsiella variicola
At-22]
Length = 1159
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)
Query: 41 LFDGSHEKKKNIVGENFA-QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
D E + + + QA +L +S A + ++ + ++ +A
Sbjct: 561 WTDNIRELEARLQSDRVLRQANQLRDSGNEAQAIALIQQQPAS------VRYDLTLADWA 614
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE-PSN 158
+GD++ A + +V + A L A + + + + +L +
Sbjct: 615 QQRGDSQTAIADYQRVLRQEADNGD----ARLGLAEVYLAEGDKQAARAQVMQLKGAETE 670
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
M+ L + L G A+ IF ++ + + ++
Sbjct: 671 SMNMQRRVALARAGL--GDTADAQQIFNQIVPQAKAQPPSMESALVL 715
>gi|293333874|ref|NP_001167998.1| hypothetical protein LOC100381719 [Zea mays]
gi|223945411|gb|ACN26789.1| unknown [Zea mays]
gi|223946291|gb|ACN27229.1| unknown [Zea mays]
Length = 532
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 11/86 (12%)
Query: 118 DDLAPLA---VRYAATLQAASILVDTSSYE-EISKIL---QKLSEPSNPMHQFANEILGI 170
D +AP + + L AA + + + P+ + A L
Sbjct: 35 DAVAPPSSHTLHDFNRLLAALARDGDGDAALRVLRRMRLSSPACAPTAASYTSAMSALA- 93
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPF 196
K G+ A ++F+++ + +P
Sbjct: 94 ---KAGRPADAASLFDDMLANGVAPD 116
>gi|110597396|ref|ZP_01385683.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
[Chlorobium ferrooxidans DSM 13031]
gi|110340940|gb|EAT59411.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
[Chlorobium ferrooxidans DSM 13031]
Length = 1055
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 10/155 (6%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD-TKNAAEIFLK 114
F QAL L +K+ A+ +E+IL+ K + L +A++ + + +
Sbjct: 545 TFRQALTLHQQSKIAQAKVLYEQILAVSPKHVDALHLSGVAALQSREHQRAADLIGRAIV 604
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
++ D+ + R A + + SY +P P G++ +
Sbjct: 605 LSPDNATFYSNRGIALKELGLLDAAVESYNNAIAR-----KPEYPEAYSNR---GLALHE 656
Query: 175 FGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILAN 208
K A F++ + P +S R +
Sbjct: 657 LKKFTLALASFDKAITLKPAFPEALSNRGNTLQEL 691
>gi|171318635|ref|ZP_02907781.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
gi|171096143|gb|EDT41066.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
Length = 607
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 374 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDDLPISDPRDAAVVAR-TDASI 432
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + D +RY + A T Y + K L++L ++P
Sbjct: 433 LFTAKRYPEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYATMEKQLRELIRTQP 488
Query: 157 SNPMHQFANEILGIS-ALKFGKVQKAKTIFEE 187
NP A LG S A + ++ +A + ++
Sbjct: 489 DNP---QAYNALGYSLADRNQRLPEASKLIDK 517
>gi|330959951|gb|EGH60211.1| thioredoxin [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 290
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 2/124 (1%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQTLFAESRFSEAEAVLKVLLGEDNSNAAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGIS 171
V D A L + E+ L + + HQ A + L
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAEAATLPDAAELKSRLAQNPQDDEAAHQLAIQQLSRQ 236
Query: 172 ALKF 175
+
Sbjct: 237 QYEA 240
>gi|187735875|ref|YP_001877987.1| secretion protein HlyD family protein [Akkermansia muciniphila ATCC
BAA-835]
gi|187425927|gb|ACD05206.1| secretion protein HlyD family protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 340
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 92 NMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
+ A+ + + A + +L+V N A + A +QAA ++ + SK L+
Sbjct: 78 RLRQAADEARQI-AEAARQNYLRVKNGPRAEEIAQARANVQAAEATLNNAGM--RSKRLE 134
Query: 152 KLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
L+E + Q A++ + + + A+ E L
Sbjct: 135 ALAETKSISRQEADDAVASRQVAAANLDVARKQLELL 171
>gi|119469485|ref|ZP_01612389.1| predicted peptidase [Alteromonadales bacterium TW-7]
gi|119447020|gb|EAW28290.1| predicted peptidase [Alteromonadales bacterium TW-7]
Length = 485
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 13/124 (10%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKL---YNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
AL L + KLD+A + K+L D K + +++ IA + A ++
Sbjct: 315 ALSLLDQEKLDEADTILSKLLKSDPKNLFYIDTQTDLLIA-----QKKADEAVSFLAELH 369
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
N + TL A+ ++ YE +L+ P H E+L + K
Sbjct: 370 NYRPNNQVI----TLNYANAALEAKQYELAENVLKGFLLE-KPEHSLGKELLADAYKKQD 424
Query: 177 KVQK 180
K+
Sbjct: 425 KLAA 428
>gi|111219562|ref|YP_710356.1| putative adenylate cyclase [Frankia alni ACN14a]
gi|111147094|emb|CAJ58740.1| putative adenylate cyclase [Frankia alni ACN14a]
Length = 1067
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 43/138 (31%), Gaps = 9/138 (6%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
L +A +S + + + L+ A+ +A G A R A
Sbjct: 751 LTEAAASLANFVRSGDDVGAALACRSQANAYLAAGQFAAAERAMENAVRHAEESGVPRAA 810
Query: 129 ATLQAASILVDTSSYEEISKILQ------KLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+L+ L+ + ++ L + + + L + G ++ A+
Sbjct: 811 QSLRRELTLLTSWGPRPVASSLARAGEALDAAGDDRALRRALLAQLAVLTAMSGDLEGAR 870
Query: 183 ---TIFEELAKDNNSPFG 197
EE+ D +P
Sbjct: 871 IHLKAAEEIVHDLRAPRA 888
>gi|146313570|ref|YP_001178644.1| cellulose synthase domain-containing protein [Enterobacter sp. 638]
gi|145320446|gb|ABP62593.1| cellulose synthase operon C domain protein [Enterobacter sp. 638]
Length = 1324
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+KNI G + NS D A+ FE++L + + + L+ M I GD + A
Sbjct: 256 RKNIGGAAKGEGYTALNSGNTDAAKRQFEQVLQTNPQDADALAGM--GYIAQRSGDYQAA 313
Query: 109 AEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
A+ + A+ A+T + D + Y ++++ Q L E + + L
Sbjct: 314 AQYLGRAASQGG------DASTARQTQAD-DAAFYGQLAQAQQALKEGNVS------QAL 360
Query: 169 GISA---LKFGKVQKAKTIFEE 187
+SA + G+ A +F
Sbjct: 361 ALSAPLVQQSGERGTAAKLFRA 382
>gi|30025849|gb|AAP04428.1| 34 kDa outer membrane protein [Coxiella burnetii]
Length = 300
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 54 GENFAQALELFNSNKLDDARSSFEK-ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF 112
+ QAL+L + D A++SF+ + N Y ++ ++ I + + D KNAA F
Sbjct: 171 SNTYRQALDLLTKKQYDKAQASFQNYLNDYPNGSYIANAHYWLGEIYLQQKDRKNAAHEF 230
Query: 113 LKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
V + V A L+ A I + ++ + L ++
Sbjct: 231 QTVRDKFPKSEKVLD-AKLKLAIIDAEDGKIKQAKEELTEI 270
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 19/154 (12%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK- 114
+ +A++L ++ + + L + YNP+ L G T A +F +
Sbjct: 445 AYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEY-----LCNNGQTAKAEVLFRQL 499
Query: 115 ----VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
V + D +R A + E +IL+ +S P A E+L
Sbjct: 500 MKRGVQDQDALNNLIRGHAK---------EGNPESSYEILKIMSRRGVPREANAYELLIK 550
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
S + G+ AKT + + +D + P RS +
Sbjct: 551 SYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVI 584
>gi|296445770|ref|ZP_06887723.1| thioredoxin [Methylosinus trichosporium OB3b]
gi|296256750|gb|EFH03824.1| thioredoxin [Methylosinus trichosporium OB3b]
Length = 296
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ + F A L L A + ++S+D L ++ + A +LV + A
Sbjct: 122 DEGADAFLVAEALIGEGDLAGAEAILTDLVSRDPPLPKAVAEL--ARLLVEQDRLAEAQA 179
Query: 111 IFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ +A + AATL+ A + +E+ + + + A L
Sbjct: 180 LLEGLAAELAGDAGVAAAAATLENALRASELDEVDELQRRIAFDPDDLQ-----ARFDLA 234
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
++ GK A T ++ + + S R Q+I
Sbjct: 235 LALNAKGKRDDAATALLDIIRKDRSWSDDGARKQLIQ 271
>gi|262040587|ref|ZP_06013827.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042079|gb|EEW43110.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 1159
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 57/167 (34%), Gaps = 14/167 (8%)
Query: 41 LFDGSHEKKKNIVGENFA-QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
D E + + + QA +L +S A + ++ + ++ +A
Sbjct: 561 WTDNIRELEARLQSDRVLRQANQLRDSGDEAQAIA----LIKRQPSSVRY--DLTLADWA 614
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSS-YEEISKILQKLSEPSN 158
+GD++ A + +V + A L A + + ++++Q +
Sbjct: 615 QQRGDSQTAIADYQRVLRQEADNGD----ARLGLAEVYLAEGDKPSARAQVMQLKGAETE 670
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
M+ L + L G A+ IF ++ + + ++
Sbjct: 671 SMNMQRRVALAQAGL--GDTADAQRIFNQIVPQAKAQPPSMESALVL 715
>gi|218709667|ref|YP_002417288.1| Tfp pilus assembly protein PilF [Vibrio splendidus LGP32]
gi|218322686|emb|CAV18862.1| Tfp pilus assembly protein PilF [Vibrio splendidus LGP32]
Length = 249
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 10/155 (6%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPLA 124
+ AR + E + Y + + +A G+ A + ++ D
Sbjct: 58 QGNMVKARENLELAIKHAPSYYR--AQLSMAHYYEQVGEADEARTTYRKALSLDSRNGNV 115
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN-EILGISALKFGKVQKAKT 183
+ T L YE+ K + + A+ E A K G +AK
Sbjct: 116 LNNYGTF-----LCKQGEYEQADKYFNRAIDQPYYYLVSASYENAAFCAFKAGNTDQAKY 170
Query: 184 IF-EELAKDNNSPFGISTRSQMILANIIASDQRNK 217
F + D N I S++ +++ +D R +
Sbjct: 171 YFTRAIDHDPNRVKSILQLSKIEVSDADYNDARLR 205
>gi|217978468|ref|YP_002362615.1| TPR repeat-containing protein [Methylocella silvestris BL2]
gi|217503844|gb|ACK51253.1| TPR repeat-containing protein [Methylocella silvestris BL2]
Length = 935
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 32/174 (18%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLA 121
L +L+DA ++ L L+N A+I + G A + D
Sbjct: 305 LHELGRLEDAYMAYAAALKIRPAFLPALTN--RANICLQWGRLDEAIRHCDEALRHDPKY 362
Query: 122 PLAV-------RYAATLQAASILVD------TSSYE------EISKILQKLSEPSNPMHQ 162
P A+ L+ A + +D ++ E + + + +L++ H+
Sbjct: 363 PQALGLRGAALHRLGRLEEALVSLDLAVSVRPAAPEAWLNRGNVLQEMDRLADAVASYHE 422
Query: 163 FAN------EIL---GISALKFGKVQKAKTIF-EELAKDNNSPFGISTRSQMIL 206
E L G++ + G V +A F E + + P + R+ +L
Sbjct: 423 ALRLSPHYPEALSSLGVALKEQGDVDEALACFNEAIHYKPDYPDARNNRAGALL 476
>gi|86741120|ref|YP_481520.1| serine/threonine protein kinase [Frankia sp. CcI3]
gi|86567982|gb|ABD11791.1| serine/threonine protein kinase [Frankia sp. CcI3]
Length = 785
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 11/153 (7%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+ AR +I ++D + + + +A GDT A F +V D++
Sbjct: 547 GRTAAAREMLAEIEAEDPFEWRV--DWQRGLLALADGDTAAARGAFDRV-YDEVPGELAP 603
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK--FGKVQKAKTI 184
A + A T ++ +S + A G++ ++ G A
Sbjct: 604 KLALARTAEA---TGDLPRAQQLYDLVSRTDDAFTGAA---FGLARVRIAAGNRDGAVAA 657
Query: 185 FEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ + + + R +L + + N+
Sbjct: 658 YRRVPPASAAHVDAQIRLARVLGTVTVAGVPNR 690
>gi|7378643|emb|CAB83319.1| putative protein [Arabidopsis thaliana]
Length = 482
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 62/158 (39%), Gaps = 10/158 (6%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
E N + F L + +A F +I N++ + +++ I
Sbjct: 169 FHKMRTEGFTNEAVKMFDA---LSKDGRTHEALELFSQI-KDKNRMPDVVAHTAIVEAYA 224
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
G K ++F+++ ++P A Y+ ++ + D ++++ K L ++ N M
Sbjct: 225 NAGQAKETLKVFMRMLASGVSPNAYTYSVLIK--GLAADGKTHKDAKKYLLEMM--GNGM 280
Query: 161 HQFANEILGI--SALKFGKVQKAKTIFEELAKDNNSPF 196
A + + ++ GK + A+ + +E+ P
Sbjct: 281 SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 318
>gi|320101946|ref|YP_004177537.1| hypothetical protein Isop_0393 [Isosphaera pallida ATCC 43644]
gi|319749228|gb|ADV60988.1| hypothetical protein Isop_0393 [Isosphaera pallida ATCC 43644]
Length = 546
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 33/98 (33%), Gaps = 3/98 (3%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+A+ + + + + L ++ + + IW L E+ IV E + + +
Sbjct: 225 EADQRITWSEWVQTRRRVLIMLAVVGFVGVTIWQNLRQARLEEYPRIVAEGYERGIPALE 284
Query: 66 SNKLDDARSSFEKI--LSQDNKL-YNPLSNMYIASILV 100
+ + D A+ + + + A+
Sbjct: 285 AGQFDLAKQLLADALRAVEGLGGQVEHAAEIRQAAREA 322
>gi|195122536|ref|XP_002005767.1| GI18897 [Drosophila mojavensis]
gi|193910835|gb|EDW09702.1| GI18897 [Drosophila mojavensis]
Length = 902
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
A L N+ +A S+E+++ Y + ++++L +G + A + +
Sbjct: 473 HAECLRQLNRTQEAIQSYERVVQLAPYCYE--AKFTLSALLKQQGRPEEAVKALEQSGEQ 530
Query: 119 DLAPLAVR 126
+ PL R
Sbjct: 531 EGQPLHAR 538
>gi|171320624|ref|ZP_02909644.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MEX-5]
gi|171094137|gb|EDT39224.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MEX-5]
Length = 285
Score = 35.7 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 57/159 (35%), Gaps = 7/159 (4%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L++ + ++ +G A +LD+A + +L+ L PL+ + ++L
Sbjct: 95 LYEQARQQAPADLGPQLGLARVALRQRRLDEAAQRYRDLLAAQPNL--PLAAQGLGTVLD 152
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
+G +A ++ + +R L S+++ E ++ +L P P
Sbjct: 153 LQGRHADAQAVYRDALSAHPDAQGLRVDLGL---SLVLSNRPREGVNVLLDVAGLPDAPW 209
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
A + L + G AK + + +
Sbjct: 210 Q--ARQNLAFAYGVLGNTDSAKKLLSADLPASAVADNLR 246
>gi|149372385|ref|ZP_01891573.1| hypothetical protein SCB49_01247 [unidentified eubacterium SCB49]
gi|149354775|gb|EDM43338.1| hypothetical protein SCB49_01247 [unidentified eubacterium SCB49]
Length = 987
Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Query: 64 FNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND-DLA 121
+ NK ++A S+++K+++ Y S + A +L GD+ A F KVA D
Sbjct: 602 ASQNKNNEAISAYDKLITSLPNSSYVSKSLLKKALLLDISGDSNGALTTFKKVAKDFPST 661
Query: 122 PLAVRYAATLQAASILVDTS---SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
P A++ ++ + I D Y E L ++ N + + K
Sbjct: 662 PEAIQAVSSAKVIYI--DEGRVDEYAEWVNTLNFVAIEDNELDDATYQA-AEQPYLENKT 718
Query: 179 QKAKTIFEELAKD 191
+A T FE D
Sbjct: 719 GQATTRFEAYLND 731
>gi|167645819|ref|YP_001683482.1| sulfotransferase [Caulobacter sp. K31]
gi|167348249|gb|ABZ70984.1| sulfotransferase [Caulobacter sp. K31]
Length = 725
Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 14/131 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND--DL 120
L +K+D+A +++++ +Q + + A +L+ +GDT+ A F V
Sbjct: 292 LQAQDKMDEALAAYDR-AAQSLGFAPEKALVNRAILLMERGDTEAAKAAFDDVLEHFPRS 350
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF----G 176
A +A ++ L P +Q L + K G
Sbjct: 351 ASAWFN-----RADLHRFVPGDPA--IGAMEALIGPGGVQNQADRTALHFALGKAWMDVG 403
Query: 177 KVQKAKTIFEE 187
++A +E
Sbjct: 404 DAERAFRYLDE 414
>gi|329114139|ref|ZP_08242901.1| TPR Repeat-Containing Protein [Acetobacter pomorum DM001]
gi|326696215|gb|EGE47894.1| TPR Repeat-Containing Protein [Acetobacter pomorum DM001]
Length = 534
Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 7/149 (4%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L +N+ ++A I S+ +PL + + K A A +
Sbjct: 52 AYCLAGTNQPEEAAEILCDIASRHAGTEHPLQALSDLLAELDKRPLAEAVCR----AALE 107
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
P R L ++LV ++E +L + + P ++ +L ++ L+ G+
Sbjct: 108 RTPQDARIYDIL--GNLLVQCGQFDEAISLL-RHAVDLRPNSMHSHNLLAMALLEQGRFD 164
Query: 180 KAKTIFEELAKDNNSPFGISTRSQMILAN 208
+A + + + G + +LA
Sbjct: 165 EALAHLQNVLETQPDHAGTLSNIGCMLAG 193
>gi|163749555|ref|ZP_02156802.1| hypothetical protein KT99_16084 [Shewanella benthica KT99]
gi|161330665|gb|EDQ01602.1| hypothetical protein KT99_16084 [Shewanella benthica KT99]
Length = 206
Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGD 104
H +K A + L+ A ++ + ++S K ++ M +A + +G
Sbjct: 81 HSQKGYQSLLELIVAKAAVEAGDLEKAEATLKSVVSSAPDKGLVMVATMRLARVQAEQGQ 140
Query: 105 TKNAAEIFLKVAN 117
A +VA+
Sbjct: 141 ITTAITTLDQVAD 153
>gi|332830423|gb|EGK03051.1| hypothetical protein HMPREF9455_01301 [Dysgonomonas gadei ATCC
BAA-286]
Length = 998
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 14/130 (10%)
Query: 68 KLDDARSSFEKILSQ-DNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
K D ++ +K+L + + Y L G ++ A +VA D R
Sbjct: 853 KDQDVVAAADKLLQNKASGSVANEARFYRGQSLKNLGQSEKAIADLQEVAKDT------R 906
Query: 127 YAATLQAASILVD----TSSYEEISKILQKLSEPSNPM-HQFANEILGISALKF--GKVQ 179
A ++ +L D SY++ K +Q + P + A I+ +S + G
Sbjct: 907 SAFGAESQYLLADIYYQAKSYDKAEKQIQSFMKEGTPHEYWMARAIVVLSDVYAAKGDKF 966
Query: 180 KAKTIFEELA 189
+A+ E L
Sbjct: 967 QARQYLESLQ 976
>gi|330829763|ref|YP_004392715.1| von Willebrand factor, type A [Aeromonas veronii B565]
gi|328804899|gb|AEB50098.1| von Willebrand factor, type A [Aeromonas veronii B565]
Length = 576
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 59/176 (33%), Gaps = 27/176 (15%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
+Y G + + + F + + + + A+S+F + S+ + +Y
Sbjct: 371 QGQWYFQQGDYLEAAKHYEDPFYKGVAYYYGAEFALAQSAFLQADSE-------QALLYA 423
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAAT-LQAASILVD---------TSSYE- 144
+ L + + A +F K+A++ P + AA Q S +VD T + +
Sbjct: 424 GNALARQREYLAARRLFRKLADEASDPSVRQSAAHNYQVMSGIVDEINRASQSQTGTPDG 483
Query: 145 --------EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+ +E + A E L + +A+ + D
Sbjct: 484 PDHSSELPDDEPRSANGAEETVASSLMARETLTADQILA-NPAQAEKWLRRVESDP 538
>gi|330792060|ref|XP_003284108.1| hypothetical protein DICPUDRAFT_93608 [Dictyostelium purpureum]
gi|325085922|gb|EGC39320.1| hypothetical protein DICPUDRAFT_93608 [Dictyostelium purpureum]
Length = 731
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
+A + K ++A IL++ Y+ + A++L + A + KV
Sbjct: 237 EKANKEIKEGKHEEALKRLYWILTKTP--YDVHIRLQRATLLQEMSRFEEAIKDCDKVIK 294
Query: 118 DDLAPLAVRYAATLQ 132
L + + TL+
Sbjct: 295 TSLDGEYLSESYTLK 309
>gi|260431284|ref|ZP_05785255.1| hypothetical protein SL1157_0382 [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415112|gb|EEX08371.1| hypothetical protein SL1157_0382 [Silicibacter lacuscaerulensis
ITI-1157]
Length = 857
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 9/131 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F L++ S + +A S + + S A +L + + A ++
Sbjct: 678 FQIGLDIS-SGRFAEAESKIANLSKLSDDNGR--SGFREAQLLERRNEHHKAKLACSELL 734
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
P +R + AA ++ + + ++ L++ + A+ + +
Sbjct: 735 RMGTGVPPKIRSLRAVSAA----NSGDFSLADQDIEFLAK-IPAWSKVADRCRALRYMAA 789
Query: 176 GKVQKAKTIFE 186
G + +A I +
Sbjct: 790 GDLDQAGEILD 800
>gi|257456245|ref|ZP_05621442.1| putative lipoprotein [Treponema vincentii ATCC 35580]
gi|257446331|gb|EEV21377.1| putative lipoprotein [Treponema vincentii ATCC 35580]
Length = 489
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+N++ +A + +K + + +++ S + G + A F + +L P
Sbjct: 241 SETNRMAEAITDIQKAIDLEPDAAPHWTDL--GSYNLQIGRKEEALAAFNR--AIELVPD 296
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ + A + D + E+ K +K++ P + FA E LGI + + A+
Sbjct: 297 SY--FIHIYLAGLNDDLGNKEDAIKHYKKVT-ELYPQYYFAYEGLGILLFEKKDWESARR 353
Query: 184 IF 185
F
Sbjct: 354 AF 355
>gi|312130767|ref|YP_003998107.1| hypothetical protein Lbys_2058 [Leadbetterella byssophila DSM
17132]
gi|311907313|gb|ADQ17754.1| Protein of unknown function DUF2133 [Leadbetterella byssophila DSM
17132]
Length = 232
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 31/165 (18%)
Query: 26 PLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK 85
+ IL++ F ++ ++ ++ A+ F ++ A
Sbjct: 37 IAAGVAILAVVGGFLGYNYWNKNQEKEAQAALYDAVYSFEADSTAQALKG---------- 86
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
+G + + D+ + A L A L+ Y E
Sbjct: 87 ----------------QGGNEGLLSV-----ADNYSTTKAGNLANLYAGIALMKEGKYTE 125
Query: 146 ISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ L K S + + A ++G S L+ GK + A +++ A
Sbjct: 126 AIERLDKFSANDDVLQPRAYTLIGDSYLELGKAEDAIKYYKKAAD 170
>gi|269796979|ref|YP_003316434.1| tetratricopeptide repeat protein [Sanguibacter keddieii DSM 10542]
gi|269099164|gb|ACZ23600.1| tetratricopeptide repeat protein [Sanguibacter keddieii DSM 10542]
Length = 1126
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 15/148 (10%)
Query: 44 GSHEKKKNIVGEN---FAQALELFNSNKLDDAR----SSFEKILSQDNKLYNPLSNMYIA 96
E + G+ A A +LDDA ++ ++ ++ + ++ +
Sbjct: 534 YWVEALRRDPGDARTHVALAARRARDGRLDDAERHLRAAVRRLTLRNPNPRDGEAHYRLG 593
Query: 97 SILVAKGDTKNAAEIFLKVANDDL-APLAVRYAATLQAASILVDTSSYEEISKILQKLSE 155
+L +G A E + D AV A L A L D +++ ++ +
Sbjct: 594 VVLARQGRVVEAREALGTASWDRSWLDAAVVATARLDLAERLEDA--VDDLQALVTR--- 648
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKT 183
P H A +L ++ + G A+
Sbjct: 649 --APGHVQARNLLTVALRRAGDEAAARE 674
>gi|15805161|ref|NP_293847.1| hypothetical protein DR_0121 [Deinococcus radiodurans R1]
gi|6457788|gb|AAF09713.1|AE001874_10 hypothetical protein DR_0121 [Deinococcus radiodurans R1]
Length = 449
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ F++A ++ + +A + F++ P + + + GDT A
Sbjct: 280 AATQAFSRAYASLDAGRRAEALAGFQEAARSAPNF--PEAQREAGRLALEAGDTGAALSA 337
Query: 112 FLKVANDDLAPLAVR 126
+ +A A + R
Sbjct: 338 YQALAALPGATDSDR 352
>gi|313200626|ref|YP_004039284.1| type II and iii secretion system protein [Methylovorus sp. MP688]
gi|312439942|gb|ADQ84048.1| type II and III secretion system protein [Methylovorus sp. MP688]
Length = 645
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 41/172 (23%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+ +++ ++L LA + EKK F +A +L N+ ++ + ++L
Sbjct: 5 RPYRAVVVALMLGLAA-----CSAQEKKVQQGNAEFQEARKLVNAGDIEGGIARLRELLR 59
Query: 82 Q--DNKLYNPLSN----------MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAA 129
DN Y + A +G A + +V D +
Sbjct: 60 TFPDNPQYRAYLKQQQDMQLTLLLKEADQNKQQGRMTEAEAGYYRVLALDNQNQRAQ--- 116
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ L + +N A + LK G + A
Sbjct: 117 ---------------------EGLRQLNNAARHDAMLQRAQALLKAGDSEGA 147
>gi|196229795|ref|ZP_03128659.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
gi|196226121|gb|EDY20627.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
Length = 1028
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
A L N+ + +A + K ++ L A + + A +F K
Sbjct: 867 AASTLINAGRGVEALAVVTKAVADAPGDARVL--RRAAKVEARMQNMAEAVALFDKSLEI 924
Query: 119 DLAPLAVR 126
+ R
Sbjct: 925 EPDNFETR 932
>gi|328910928|gb|AEB62524.1| Putative efflux system component yhbJ [Bacillus amyloliquefaciens
LL3]
Length = 221
Score = 35.7 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSH---EKKKNIVGENFAQAL 61
+ + K G+ I L++++ + +Y + +H + + G+ A+
Sbjct: 3 EEETKGENKMNRGRLILTNIIGLIVVLAIIGGGAYYYYQSTHYVKTDEAKVAGD--MAAI 60
Query: 62 ELFNSNKLDD 71
+ K+ D
Sbjct: 61 TAPAAGKVTD 70
>gi|117618478|ref|YP_858317.1| M23/M37 peptidase domain-containing protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559885|gb|ABK36833.1| M23/M37 peptidase domain protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 301
Score = 35.7 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 12/92 (13%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKL----DDAR 73
K W+ + ++ W + E AL + K D+AR
Sbjct: 19 KQRLAWVGGIFFTVLALSGGWLWQSWHQTM-------EALEVALAMAEQQKSTQGADEAR 71
Query: 74 SSFEKILSQDNKLYNPLSNMYIASI-LVAKGD 104
+ +Q + L + L K D
Sbjct: 72 EQLAMLAAQVGTMQGQLGRLNALGERLTEKAD 103
>gi|83745820|ref|ZP_00942877.1| HmsH [Ralstonia solanacearum UW551]
gi|207739794|ref|YP_002258187.1| hemin-binding outer membrane protein [Ralstonia solanacearum
IPO1609]
gi|83727510|gb|EAP74631.1| HmsH [Ralstonia solanacearum UW551]
gi|206593176|emb|CAQ60082.1| hemin-binding outer membrane protein [Ralstonia solanacearum
IPO1609]
Length = 825
Score = 35.7 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L + ++ DA +E + + + AA + + D
Sbjct: 310 VALASRGRMKDATQRYEAM--SQAGKVPAYTRVSAGDAYAYLDKPDRAAAAYTQALKDAG 367
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
+DT YE+ +L K+ + + A E
Sbjct: 368 PGEIETGDVQEGLFYADLDTGRYEDARALLDKMKADNPEYVRLAPEA 414
>gi|152982107|ref|YP_001352212.1| hypothetical protein mma_0522 [Janthinobacterium sp. Marseille]
gi|151282184|gb|ABR90594.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 699
Score = 35.7 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 4/142 (2%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
+ + ++A L + D+A +F+K + + + A++ +
Sbjct: 276 WAQRALISAPDNANAHYAHGQILQALGRHDEALLAFDK-AAALPGSVEEDALLARATLFM 334
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYA-ATLQAASILVDTSSYEEISKILQKLSEPSNP 159
G +++A+ F +V P +VR A A D + L + + S
Sbjct: 335 ESGRSEDASIAFEQVL--QRFPGSVRALTARNDAKVYQADDPDITVMEAALAQTASLSLA 392
Query: 160 MHQFANEILGISALKFGKVQKA 181
+ LG + L ++A
Sbjct: 393 DRTAVHFALGKAYLDINHSERA 414
>gi|311694386|gb|ADP97259.1| conserved hypothetical protein [marine bacterium HP15]
Length = 218
Score = 35.7 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 61/191 (31%), Gaps = 14/191 (7%)
Query: 6 DANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFN 65
+ + + + + K +K L++ I + + + + E Q L N
Sbjct: 3 ELRTEEEQIQAIKDWWKKNGSSLLIGIGAALAIVFGWQAWQNHQAQQRTEAANQFANLLN 62
Query: 66 S--NKLDD---------ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ ++ D+ A++ E +Y L L+ G+ + A +
Sbjct: 63 AFSDQADETSGETVAFVAQTLREDYTDSAYAVYGNLILARQ--QLMQDGNAEAAIDSLKW 120
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+ A+ + A YE+ + + ++ +E+ G L
Sbjct: 121 ALENTGEHEALALVVRNRLARAQFTAGQYEDALATIDG-AGNADAFDAMYSELRGDILLA 179
Query: 175 FGKVQKAKTIF 185
G + A+ +
Sbjct: 180 QGDREGAREAY 190
>gi|310822253|ref|YP_003954611.1| social gliding motility protein tgl [Stigmatella aurantiaca
DW4/3-1]
gi|309395325|gb|ADO72784.1| Social gliding motility protein Tgl [Stigmatella aurantiaca
DW4/3-1]
Length = 250
Score = 35.7 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 46/161 (28%), Gaps = 21/161 (13%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSN----------------KLDDARSSFEKILSQDNKL 86
F QA+ L N + +A + +EK L
Sbjct: 40 QAQQAGSIQEALSEFQQAVALDPDNADARNALGIVLHLSFGRHAEALAEYEKALELRPNF 99
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
+ + ++ + +G A + +V ND L P A +
Sbjct: 100 --SEARSNLGNVYLDQGRYDEAIRTYEQVLNDMLYPTPF--IAQSNLGWAYFKKGDTAKA 155
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+ ++ + NP + LG + G ++A F
Sbjct: 156 LENIKS-AVTLNPNFCRGYQNLGFIYDQTGDTEEACRQFSR 195
>gi|255264434|ref|ZP_05343776.1| thioredoxin [Thalassiobium sp. R2A62]
gi|255106769|gb|EET49443.1| thioredoxin [Thalassiobium sp. R2A62]
Length = 304
Score = 35.7 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 6/132 (4%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G A E+ + + DA +F +L ++ + A + + D A +
Sbjct: 133 GAAVEAAEEMLEAGEAADAAQTFAAVLEEEPANAVAYGGLVRAHMAMDDVDQAEAI-LNG 191
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
A AP A ++ A + E+ ++ A L I+
Sbjct: 192 APAEISEAPELEAARAMIELARQAAEAGPVAELRAAVEADEND-----HQARLDLAIALH 246
Query: 174 KFGKVQKAKTIF 185
G + A
Sbjct: 247 GAGDAEGAVDQL 258
>gi|90022221|ref|YP_528048.1| molybdopterin converting factor subunit 1 [Saccharophagus degradans
2-40]
gi|89951821|gb|ABD81836.1| peptidase M48, Ste24p [Saccharophagus degradans 2-40]
Length = 503
Score = 35.7 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 51/125 (40%), Gaps = 13/125 (10%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAA 109
+ + + L L + K + A + E++++ + + Y ++ A + KGD + A
Sbjct: 326 SKLAAQYGLVLSLTRAGKTERALTLAEELVAAEPENIYFTVAR---ADVYAEKGDFETAV 382
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE----ISKILQKLSEPSNPMHQFAN 165
+ + A+ ++ A +L+ Y E +++ +Q+ + A
Sbjct: 383 KALQEKLKTHPNHHAL----NVRLAEVLMKAGRYNECAELLNRHVQRRPNDDYVWYLLA- 437
Query: 166 EILGI 170
E+ G+
Sbjct: 438 EVQGL 442
>gi|301104862|ref|XP_002901515.1| Intraflagellar Transport Protein 122 [Phytophthora infestans T30-4]
gi|262100519|gb|EEY58571.1| Intraflagellar Transport Protein 122 [Phytophthora infestans T30-4]
Length = 1285
Score = 35.7 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 52/176 (29%), Gaps = 25/176 (14%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN 92
++ + + D + + N + + + Q L + + + +
Sbjct: 610 VARKAFIRVRDVRYIELVNALEQTWKQQLPQSEGSSNQEGEDA------GGEAGKKVRAL 663
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA---------ATLQAASILVDTSSY 143
+ A I+ +G AA++F A AT + A
Sbjct: 664 LQ-AEIMAHQGKFPLAAKLFADCGEPARAIKMFADLRMWDEAKRFATARQA------GDV 716
Query: 144 EEISKILQKLSEPSNPMHQFANEILGIS--ALKFGKVQKAKTIFEELAKDNNSPFG 197
+++ + +E A E+ S ++ G++ ++L P
Sbjct: 717 QQLVLAQARWAEDVQDWRAAA-EMYAASGNYVRAGEILGEHGWLDQLLDLTRKPEA 771
>gi|87309305|ref|ZP_01091441.1| hypothetical protein DSM3645_21919 [Blastopirellula marina DSM
3645]
gi|87287944|gb|EAQ79842.1| hypothetical protein DSM3645_21919 [Blastopirellula marina DSM
3645]
Length = 339
Score = 35.7 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA---NDD 119
+ D A + I + + Y + + A L+A+ A++++ +V
Sbjct: 156 AVAQQQYDRATLYYSSIANAKSADYRARARVLAARALIAQDKFAEASKMYDEVLALKAPS 215
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP----MHQFANEILGISALKF 175
+ AT+ A L + + K+++ + E +NP + A LG K
Sbjct: 216 SGVARQKDFATVGKAICLAELGKPADGVKMIEPVLERANPKDIDLFSAAYNALGRCHQKA 275
Query: 176 GKVQKA 181
G+ + A
Sbjct: 276 GQPKDA 281
>gi|292493729|ref|YP_003529168.1| thioredoxin [Nitrosococcus halophilus Nc4]
gi|291582324|gb|ADE16781.1| thioredoxin [Nitrosococcus halophilus Nc4]
Length = 287
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 9/161 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV- 115
QA + + + K D + Y L ++ +A L+ +G A ++ +
Sbjct: 120 LEQAQTALAAGQEEQGLHLLHKAAEIDPENY--LVSVALAGALLKQGKMTKAEQMLKALP 177
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
A A ++ A++ + + L+ +NP A +LG
Sbjct: 178 LEVRGEEPASGLLAQIEFATLTEKAPDIHSLKQRLK-----ANPEDSEARYLLGAQQALA 232
Query: 176 GKVQKAKTIF-EELAKDNNSPFGISTRSQMILANIIASDQR 215
G Q A F L ++ + ++ + + NI+ D
Sbjct: 233 GDYQDALEQFMVLLKQNPKYGDEAARKALLAVFNILGPDHE 273
>gi|154685362|ref|YP_001420523.1| YhbJ [Bacillus amyloliquefaciens FZB42]
gi|154351213|gb|ABS73292.1| YhbJ [Bacillus amyloliquefaciens FZB42]
Length = 221
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 5 NDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSH---EKKKNIVGENFAQAL 61
+ + K G+ I L++++ + +Y + +H + + G+ A+
Sbjct: 3 EEETKGENKMNRGRLILTNIIGLIVVLAIIGGGAYYYYQSTHYVKTDEAKVAGD--MAAI 60
Query: 62 ELFNSNKLDD 71
+ K+ D
Sbjct: 61 TAPAAGKVTD 70
>gi|325133006|gb|EGC55681.1| tetratricopeptide repeat protein [Neisseria meningitidis M6190]
Length = 470
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 91 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFDNR 148
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 149 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 184
>gi|325128900|gb|EGC51754.1| tetratricopeptide repeat protein [Neisseria meningitidis N1568]
Length = 487
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 108 YLQQAQQDKMLALYAQGILAQTDGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFDNR 165
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 166 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 201
>gi|257057418|ref|YP_003135250.1| putative transcriptional regulator [Saccharomonospora viridis DSM
43017]
gi|256587290|gb|ACU98423.1| putative transcriptional regulator [Saccharomonospora viridis DSM
43017]
Length = 896
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 44/114 (38%), Gaps = 12/114 (10%)
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
+ N L+ M + A+ + + A IF ++ + +R + +
Sbjct: 726 VGRIHNARIRVLAGMGR--LRRAQQEAERALSIFEELGHTLWYSHTLRDV-----GWLQI 778
Query: 139 DTSSYEE----ISKILQKLSEPSNPMHQF-ANEILGISALKFGKVQKAKTIFEE 187
T S E+ ++K +++ + + + A + GI+ + + +A+ F
Sbjct: 779 RTGSPEKAIPPLTKAIERTRQAGDAYAEAMARHLRGIAYRETNRFAEARQEFGR 832
>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 466
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 57/155 (36%), Gaps = 16/155 (10%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNS-NKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
+ D + N G + L++ +++ A S + + + + K + A+
Sbjct: 81 IHDFDETIRLNPEGRAYDNRGNLYDQKGEVEKAISDYTEAIKLNPKDAWAYAK--RAADY 138
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD----TSSYEEISKILQKLSE 155
KGD++ A + + + + +A ++ D + Y+++ K+
Sbjct: 139 HKKGDSEKAISDYTQAIQINPKDANYYD-SRGRAYAMKRDWDKAIADYDQVVKL------ 191
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
NP A G++ G + KA E+ K
Sbjct: 192 --NPKQVSAYNSRGLAYAMKGDMDKAIRDLSEVIK 224
>gi|209964269|ref|YP_002297184.1| TPR domain protein [Rhodospirillum centenum SW]
gi|209957735|gb|ACI98371.1| TPR domain protein [Rhodospirillum centenum SW]
Length = 593
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
FAQ L L ++ +LD ARS F ++ + L + I +GD AA +F
Sbjct: 35 AFAQGLHLQSTGQLDQARSVFLQLAERPELTAPALHQL--GVIAAFQGDNGRAAGLFEHA 92
Query: 116 ANDDLAPLAV 125
+ A
Sbjct: 93 MKLEPAEPLY 102
>gi|320104835|ref|YP_004180426.1| hypothetical protein Isop_3315 [Isosphaera pallida ATCC 43644]
gi|319752117|gb|ADV63877.1| hypothetical protein Isop_3315 [Isosphaera pallida ATCC 43644]
Length = 986
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 27/147 (18%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVANDDL-APLAV--------RYAATLQAASILVDTS 141
+ M I + +G+ + A + KVA+D P A+ R A L+A +
Sbjct: 583 ALMTIGQVEFGRGNDEAAIAAYDKVADDSARKPEAITRAAAARARRAGQLRAQGQTAEAD 642
Query: 142 SYEE--------ISKILQKLSEP-SNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+ + LQ + P ++P+ A +L + G +A + + LA+D
Sbjct: 643 QLRDQAISQLRGATARLQAANTPSTDPVRIDAALVLADLLMNAGHPDEALQVIQPLARDL 702
Query: 193 NS----PFGISTR-----SQMILANII 210
+ P + R + +++ANI
Sbjct: 703 TAIASPPPPVRDRAVRVMATLMMANIQ 729
>gi|170698575|ref|ZP_02889644.1| type II and III secretion system protein [Burkholderia ambifaria
IOP40-10]
gi|170136509|gb|EDT04768.1| type II and III secretion system protein [Burkholderia ambifaria
IOP40-10]
Length = 783
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 37/145 (25%), Gaps = 42/145 (28%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYN----------PLSNMYIASILVAKGDTKNAAEI 111
+L ++ ++ ++ + Y M A I A A
Sbjct: 47 KLIEKGQVGQGLEQMQQASKENPERYRMKFIAERDNQVRLLMQKAVIARANSQADEALAA 106
Query: 112 FLKVAN-DDLAPLAVRYA---ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
+ +V D A+R A Q A +D A
Sbjct: 107 YQQVLRYDPQHSEALRGVSLIAREQRAQAELDE-----------------------ARAA 143
Query: 168 LGISALKFGKVQKAKTIFEELAKDN 192
LG G A+ + + +N
Sbjct: 144 LG-----KGDTATARQLLNAILSEN 163
>gi|134296995|ref|YP_001120730.1| hypothetical protein Bcep1808_2904 [Burkholderia vietnamiensis G4]
gi|134140152|gb|ABO55895.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia vietnamiensis
G4]
Length = 607
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 7/150 (4%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 374 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDDLPISDPRDAAVVAR-TDASI 432
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
L A + D +RY + A T Y + K L++L +
Sbjct: 433 LFTAKRYTEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYATMEKQLRELIR-TQ 487
Query: 159 PMHQFANEILGIS-ALKFGKVQKAKTIFEE 187
P + A LG S A + ++ +A + ++
Sbjct: 488 PDNPQAYNALGYSLADRNQRLPEANKLIDK 517
>gi|39997085|ref|NP_953036.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39983975|gb|AAR35363.1| TPR domain protein [Geobacter sulfurreducens PCA]
Length = 864
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 10/178 (5%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
++ N FAQ + L K +A + + + L + L+N+ A +
Sbjct: 693 YEAVLRNNPNHAPALFAQGMLLEMGGKKREAVTKYRQTLEKAESFAPALNNL--AFLYAE 750
Query: 102 K-GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
G + A + L + A A+ LV E KIL+K+ P
Sbjct: 751 GYGPREEALRMALTALKQEPANAAIADT----YGYALVKNGRAGEAVKILEKV-VKLMPS 805
Query: 161 HQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
+ L ++ G +A T +E + P +++++LA + + KK
Sbjct: 806 NPAVRYHLALAYRDTGDRARAATTLQEALNQGDFPES--GQARIMLAELSGAAGTVKK 861
>gi|154247338|ref|YP_001418296.1| TPR repeat-containing protein [Xanthobacter autotrophicus Py2]
gi|154161423|gb|ABS68639.1| Tetratricopeptide TPR_2 repeat protein [Xanthobacter autotrophicus
Py2]
Length = 781
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 19/162 (11%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
++ +APLLI + + + N + + AL + ++L A +E
Sbjct: 545 WRRLAPLLIDPVAGV----------RIEAANQLADQPLAALSAADRDRLSTAFREYEAAQ 594
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAATLQAASILVD 139
+ P + + L+ +GD A + P A L +
Sbjct: 595 RLNAD--RPEARSNLGGFLLRRGDVAGAEAQYRAGLKLQPDLPALAVNLADLYR--LTGR 650
Query: 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+++ + + +NP LG++ ++ + +A
Sbjct: 651 EREAQDVLER----AIKANPDAAAPRHALGLALIRQKRYGEA 688
>gi|189500404|ref|YP_001959874.1| thioredoxin [Chlorobium phaeobacteroides BS1]
gi|189495845|gb|ACE04393.1| thioredoxin [Chlorobium phaeobacteroides BS1]
Length = 268
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 4/113 (3%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN 92
+ + D + + +AL K D A S E IL + +
Sbjct: 89 VGAMTERQVEDWLKKALPGKYADQLLEALSFVTQGKEDAATSILEMILKNEPANKEAAAV 148
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
+ +I A + A + + + A + +A +L+DT+ +
Sbjct: 149 LLKLTIFSA---PEAAVAMIDGL-EGEYAYAELVASARTITGLLLLDTAPLPD 197
>gi|124267183|ref|YP_001021187.1| hypothetical protein Mpe_A1994 [Methylibium petroleiphilum PM1]
gi|124259958|gb|ABM94952.1| conserved hypothetical transmembrane protein [Methylibium
petroleiphilum PM1]
Length = 228
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
A F + D AR+S E ++ + K Y L+ + +A +L+ + A +
Sbjct: 96 LLAAKAQFEKGQNDAARASLEWVIGNASDKEYAVLARLRLAGVLLDEKKYDEALK----- 150
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEE 145
A P + A + IL E
Sbjct: 151 ALPTDPPQSFAGLAADRRGDILTAQGKPAE 180
>gi|323357302|ref|YP_004223698.1| response regulator containing a CheY-like receiver domain and an
HTH DNA-binding domain [Microbacterium testaceum
StLB037]
gi|323273673|dbj|BAJ73818.1| response regulator containing a CheY-like receiver domain and an
HTH DNA-binding domain [Microbacterium testaceum
StLB037]
Length = 823
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 10/165 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ A+ F +L DA S + + +A I + +GD + A + +
Sbjct: 462 YQVAMTHFAMGRLRDASLSMGHVERMAPPPQRIRATGTLAVIALLEGDVRGAEVLVERTR 521
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ--KLSEPSNPMHQFANEILGISALK 174
+D+ A L A + ++ E +IL+ + + + FA ++ L
Sbjct: 522 DDNWFDTPWGEAIRLADAWLSLERGDAHEARRILETVPATTSARELWPFAASTQALAFLL 581
Query: 175 FGKVQKAKTIFEELAKDN--------NSPFGISTRSQMILANIIA 211
G A + S ++ R+++++A A
Sbjct: 582 SGAAPDALGVLRSWGTRARSTPPSHFQSTQMLTARAKVLIALRQA 626
>gi|322801707|gb|EFZ22318.1| hypothetical protein SINV_01130 [Solenopsis invicta]
Length = 653
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 21/168 (12%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
F +A++L K +A + +L L+++ +L+++ + K+A I
Sbjct: 334 AADAMFIKAVQLSKEGKPKEAAKLLIDHAVDEKELPMKLASVQ---VLLSQDERKDAIAI 390
Query: 112 FLKV-ANDDLAPLAVRYAATL--------QAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
+ D P V TL +A++ L + +Y K + Q
Sbjct: 391 LENLNERDRSLPGIVSALVTLHLAENDRERASTALKNAVAY--YKKNKEATENLKELWRQ 448
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
AN L+ G+++ A I +EL SP T +Q+++A +
Sbjct: 449 AAN-----FYLRGGELKIATDILQELVD--ASPSDTKTLAQLVVAYVQ 489
>gi|297204970|ref|ZP_06922367.1| TPR repeat-containing protein [Streptomyces sviceus ATCC 29083]
gi|197716916|gb|EDY60950.1| TPR repeat-containing protein [Streptomyces sviceus ATCC 29083]
Length = 708
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 17/156 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQ-----DNKLYNPLSNMY-IASILVAKGDTKNAAEIFLKVA 116
L + ++ +A + +++ + + L + A L +GD A ++F ++
Sbjct: 458 LAEAGRVSEAVALLDRLAADRRRVLGPRHTATLVTLSSKARFLRERGDAPQALQLFRELL 517
Query: 117 NDDLA----PLAVRYAATLQAASILVDTSSYEEISKIL-------QKLSEPSNPMHQFAN 165
D A A + L T + L ++L ++P
Sbjct: 518 PDMTAVLGPDHVDVLLARQELGRTLGHTGLVSDALACLSTVLEDHERLLGAAHPHTLSTR 577
Query: 166 EILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
L + + G + A + L + G+ +R
Sbjct: 578 FELALLTARSGDLHGALRQLQALLAEQERILGMHSR 613
>gi|158521286|ref|YP_001529156.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158510112|gb|ABW67079.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 879
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 30/176 (17%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L + + D A +F + L+ Y + +A +L G + A + + +D+
Sbjct: 541 LRRAEQFDKAIDAFSEALAMKPD-YAE-ARYNLAQVLYDSGQAEKAMVHYNFLVHDETTG 598
Query: 123 LAVRYAATLQAASILVDTSSYE-----EISKILQKLSEPSNPMHQFANEILGISALKFG- 176
+ A++ ++ T +E + L+ P +PM LG+ +K G
Sbjct: 599 PDL--LASIHNDLGVIYTRRHELEVAKDHLSRALCLA-PDSPMFHN---NLGLLMIKAGR 652
Query: 177 ----------------KVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRN 216
+A+ L+ + + IL+N A+D N
Sbjct: 653 KSTALESFSRAVVLDPDYAEARYQLALLSAETGDTAAAVSHYNYILSNAPAADNVN 708
>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
Length = 412
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 17/168 (10%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQA------LELFNSNKLDDARSSFEKILSQDNKL 86
S + Y+ D S V A L+L K ++A +FEK + +D
Sbjct: 39 GSASGDMYVLDDSGSVTNEEVSNEILAAELNECGLDLLRLGKYNEAIIAFEKAIDKDPGN 98
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
L+N A+ L + G + A +++ + + + ++ S E
Sbjct: 99 IYLLNN--KAAALESLGRFEEALKLYQEAVKINSEDADL-------WNNMAFSYSQIGEY 149
Query: 147 SKILQKL--SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
K ++ + P + A ++ + G+ ++A ++ + K+N
Sbjct: 150 EKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKEN 197
>gi|328953624|ref|YP_004370958.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328453948|gb|AEB09777.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 432
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 13/145 (8%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPLA 124
S + D A D L+ + + GD A ++ ++ D A
Sbjct: 58 SGRYDLALQELSTAAENDPANTRLLNVLGSCYDFL--GDYAKAQSLYEKALSLDPDNLSA 115
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ + +Y+ K ++ +P + A LG+ + G+ +A +
Sbjct: 116 MNNL-----GYSNYLSGNYKAAEKHF-RMVLDRDPNYLLARNNLGLLWCRQGRDDQALAL 169
Query: 185 FEELAKDNNSPFGISTRSQMILANI 209
+ + + +P + +LA +
Sbjct: 170 WRK--TEGEAPA--REKLNQVLAGL 190
>gi|325287187|ref|YP_004262977.1| hypothetical protein Celly_2286 [Cellulophaga lytica DSM 7489]
gi|324322641|gb|ADY30106.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
lytica DSM 7489]
Length = 995
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 5/175 (2%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL-SNMY 94
A W D + + A + F NK D A +E + + + L +N
Sbjct: 693 ANWVKDLDFVEVTDSELDNATYESAEKQFIENKTDAAIRGYENYIKEFPNGSHILDANFK 752
Query: 95 IASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
+A + KG +A + VA+ + A + I + Y L+KL
Sbjct: 753 LAQLYFGKGQKASALPYYKYVADQGGTEFTEQAIARVCEIYIG--DNKYTNAFPYLEKLE 810
Query: 155 EPSNPMH--QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
+ +N FA L K E++ + I + + +++A
Sbjct: 811 QTANIKQNVTFAQSNLMKGYYNQKNYSKTIAYAEKVLATESIDNRIKSDAHIMIA 865
>gi|296124041|ref|YP_003631819.1| hypothetical protein Plim_3808 [Planctomyces limnophilus DSM 3776]
gi|296016381|gb|ADG69620.1| hypothetical protein Plim_3808 [Planctomyces limnophilus DSM 3776]
Length = 361
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 21/63 (33%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L N D+A E + Y+ +L+A+G A F +V +
Sbjct: 175 LVNKGSFDEAAKVLESFEGVTDSSLKLQGRSYVGRVLLAQGKIPQAVTAFDEVISASGDD 234
Query: 123 LAV 125
+
Sbjct: 235 QTL 237
>gi|255658677|ref|ZP_05404086.1| Sel1 repeat family protein [Mitsuokella multacida DSM 20544]
gi|260849060|gb|EEX69067.1| Sel1 repeat family protein [Mitsuokella multacida DSM 20544]
Length = 923
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 23/120 (19%)
Query: 92 NMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
+ A + GD +A F A A A + A LQA S D + + + +
Sbjct: 485 KLREAQEALEAGDKAHALLAFQLAAEMGSAEAAWQ-AGILQARSGQQDEAQWSAVEAAV- 542
Query: 152 KLSEPSNPM------------------HQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
L + A + + A GK +A +E+L + +
Sbjct: 543 -LGKKDAAWVLYQYLKKKQNEQCAAYRRLAAKDAQELVA--QGKFAEALDWYEKLVAEGD 599
>gi|255711458|ref|XP_002552012.1| KLTH0B05170p [Lachancea thermotolerans]
gi|238933390|emb|CAR21574.1| KLTH0B05170p [Lachancea thermotolerans]
Length = 593
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 65/176 (36%), Gaps = 21/176 (11%)
Query: 34 SLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN---------------KLDDARSSFEK 78
+ + ++ G++F +A EL SN K DD+ + F +
Sbjct: 373 AAVYYHRGQMYFITQQFEQAGKDFEKAKELSESNIFPYIQLACLTYREGKFDDSETLFSE 432
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN--DDLAPLAVRYAATLQAASI 136
+ + N Y A L KGD A + + A D L + V + + A++
Sbjct: 433 -ARRKFPTAPEVPNFY-AETLSDKGDLAGARKQYDIAAKLEDALDGIHVGVSPLIGKATL 490
Query: 137 LVDTSSYEEIS--KILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
L S E L + + ++P + A L L+ + +A +FEE A
Sbjct: 491 LSREPSVENFVEATQLFEKACQNDPRSEQAKIGLAQLKLQQEDIDEAIALFEEAAD 546
>gi|163858323|ref|YP_001632621.1| hypothetical protein Bpet4005 [Bordetella petrii DSM 12804]
gi|163262051|emb|CAP44353.1| conserved hypothetical protein [Bordetella petrii]
Length = 607
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 47/151 (31%), Gaps = 8/151 (5%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
G+ + + + + D+A + ++ D+ + M A + +G
Sbjct: 347 GASDAGAAEADARVLLSRIAEDQGRYDEAIAQLGQV---DDPSLRYSAQMRQAGLRAKQG 403
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
A + D A IL + ++ L+ + + P
Sbjct: 404 RIDEALSMIEAAQPHDEDDQVQGVLTK---AQILREAGRVDDAVATLEA-ANQAQPDTVE 459
Query: 164 ANEILGISALKFGKVQKAKTIF-EELAKDNN 193
L + + G+ + +T + +A D +
Sbjct: 460 IKYELAMLYERQGRYDELETQLRQVIALDPD 490
>gi|111219763|ref|YP_710557.1| putative serine/threonine protein kinase [Frankia alni ACN14a]
gi|111147295|emb|CAJ58943.1| putative serine/threonine protein kinase [Frankia alni ACN14a]
Length = 544
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 17/150 (11%)
Query: 59 QALELFNSNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKGDTKNAAEIF 112
+A L +++ A + + +++ + L + +A +L GD + A +
Sbjct: 366 EAHSLARASRYSQATAILTEAVARAGREMGADSADVLGLRLELAELLFEGGDFRRAVSEY 425
Query: 113 LKVAND----DLAPLAVRYAATLQAASILVDTSS----YEEISKILQKLS---EPSNPMH 161
++ D D A L+ A+ T E++ +L + +P
Sbjct: 426 ERLVADLARRDGRDSERLMLARLREATCRALTGETPRALEQLGALLPDETRAFGADDPRV 485
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKD 191
+G+ L G A L D
Sbjct: 486 LELRRQIGLLQLGAGHRAAAVETLSALLVD 515
>gi|167041671|gb|ABZ06416.1| putative TPR domain protein [uncultured marine microorganism
HF4000_009L19]
Length = 516
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 13/147 (8%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV- 115
+ L +DDAR +FE+++++ + L+ + GD A F
Sbjct: 370 YQIGLASLRLGNVDDAREAFEQVVARSPT--HVLAQFNLGMARFRSGDVGAALRNFQAAS 427
Query: 116 ANDDLAPLAVRYA--ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
P+ +R A ++A + + ++ + ++P A +
Sbjct: 428 GLAGSDPVVLRQLGNAAVEAGQFWLAS----DVLDR----AVAASPTLASAWIDKARAHR 479
Query: 174 KFGKVQKAKTIFEELAKDNNSPFGIST 200
G++ +A+ + + + I
Sbjct: 480 AGGQIDRARESYTRALELEPTNDLIRQ 506
>gi|149202967|ref|ZP_01879938.1| TPR domain protein [Roseovarius sp. TM1035]
gi|149143513|gb|EDM31549.1| TPR domain protein [Roseovarius sp. TM1035]
Length = 595
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 55 ENFAQALELFNS-NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
+ A +L + D A +F+K+ + L+ + + +L G A E+
Sbjct: 317 DAVLMAADLLEDLERFDLAIEAFKKVPRDHPSYH--LAELGRSDVLRRAGKPDAAIEVLE 374
Query: 114 KVAND 118
++A D
Sbjct: 375 QLAKD 379
>gi|268557594|ref|XP_002636787.1| C. briggsae CBR-SEL-1 protein [Caenorhabditis briggsae]
gi|187020940|emb|CAP39521.1| CBR-SEL-1 protein [Caenorhabditis briggsae AF16]
Length = 685
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 50/156 (32%), Gaps = 12/156 (7%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSN---KLDDARSSFE-KILSQDNKLYNPLSNMYIAS 97
+ K + + A+ + + A ++ L+++
Sbjct: 353 YLTKSADKSSPSAQAVLGAMYMTGKGVKKNYEKALKLLTLSADKKNADGQMYLADLNYKG 412
Query: 98 ILVAKG---DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
+ KG D K A +++ ++A+ + LA A + AA T + +
Sbjct: 413 VPTTKGVHRDFKKAVKLY-QLASQNGHILAYYNLAQMHAAG----TGVPRSCAHAVDLYK 467
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ + SA K + +A + +A+
Sbjct: 468 SVAERGRWGERLMEAHSAYKDNRQDEAAMKYLFMAE 503
>gi|254417988|ref|ZP_05031712.1| tetratricopeptide repeat domain protein [Brevundimonas sp. BAL3]
gi|196184165|gb|EDX79141.1| tetratricopeptide repeat domain protein [Brevundimonas sp. BAL3]
Length = 938
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPL-SNMYIASILVAKGDTKNAAEIFLKVA 116
A AL +N L AR + SQ+ + L + + A + GD A ++ VA
Sbjct: 512 AHALAAIQTNDLPAARQLLAYVFSQNASAADQLTARVVQARLFELSGDKDRALAVYKAVA 571
Query: 117 NDDLAPLAVRYAATLQAASILVDTS--SYEEISKILQKLSEPSNPMHQFANEI-----LG 169
L +A A L A + +D + ++ ++ L++L A E+ L
Sbjct: 572 RAPLDGIAT--PAKLGAIGLELDKGVLTPDQAAQQLEQL---KWRWRGDATELAVIRKLA 626
Query: 170 ISALKFGKVQKA 181
L+ G+ ++A
Sbjct: 627 NLYLQQGRYREA 638
>gi|195387345|ref|XP_002052356.1| GJ22149 [Drosophila virilis]
gi|194148813|gb|EDW64511.1| GJ22149 [Drosophila virilis]
Length = 597
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 14/139 (10%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLK 114
F +A + F K D+ ++ + + Y + + + + G ++ F
Sbjct: 270 FLRARQAFEEQKYDEIIAACTEEIESSEAESQYKVEALLMRGTFHLLCGSFADSKLDFDA 329
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE-----PSNP--MHQFANEI 167
+ +D A +R A ++ A++ + T EE K L +E P NP HQ A +
Sbjct: 330 ILANDDADTTLRAYAFIKRAALFIQT---EEREKGLADFAEAEKLKPDNPDVYHQRAQIL 386
Query: 168 LGISALKFG--KVQKAKTI 184
L + ++ + KA +
Sbjct: 387 LLLEQIEAALLEFDKAVRL 405
>gi|170746721|ref|YP_001752981.1| hypothetical protein Mrad2831_0272 [Methylobacterium radiotolerans
JCM 2831]
gi|170653243|gb|ACB22298.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 669
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 54/141 (38%), Gaps = 9/141 (6%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L +S D+A ++ IL L+ + A + + E+ + AN
Sbjct: 208 ADALGDSGSGDEAFELYKSILDGSADSGVRLATIQKAMAHLRMAQAERLIEMGHRGANGA 267
Query: 120 LAPLAVR-YAATLQAASIL----VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A+R + A+ L +T S +++ + +P +LG A K
Sbjct: 268 SEFDAIRLDITRARIAAFLHEESAETPSPADLAAFQAVARKSGDPSQTS---LLGWYAYK 324
Query: 175 FGKVQKAKTIF-EELAKDNNS 194
+ ++A F + +A+ ++
Sbjct: 325 RRQFREALEWFKQAIARGGDA 345
>gi|154491758|ref|ZP_02031384.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
43184]
gi|154087999|gb|EDN87044.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
43184]
Length = 999
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 6/171 (3%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAA 109
+ A +LF D AR S L ++ +N Y+ SI AK + A
Sbjct: 726 EQDSLTYIAAEKLFMRGDNDGARRSLINYLQTFPEGAFSSNANFYLGSIAFAKKEFDEAI 785
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-SEPSNPM-HQFANEI 167
+ F V A + A I + Y + ++L NP Q A
Sbjct: 786 QRFKSVIASGDTKFLEESVA--RTAEIEYLSKDYPAALESFKRLQIVAENPENRQAARLG 843
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA-NIIASDQRNK 217
+ AL+ G+ + A +EL K+ + ++ + A IA Q NK
Sbjct: 844 IMRCALQTGQQKDALLAADELLKEPKLSPELEAEARYVRAKAYIAQKQANK 894
>gi|170726211|ref|YP_001760237.1| serine/threonine protein kinase [Shewanella woodyi ATCC 51908]
gi|169811558|gb|ACA86142.1| serine/threonine protein kinase [Shewanella woodyi ATCC 51908]
Length = 922
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 11/150 (7%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ FA A+ +N+ + A I Q L + A + +A K A
Sbjct: 619 EQAIDQFAIAIT---TNEFEQAEKQLT-IAKQRGADETVLIELQ-AYLFLASNQLKQAIN 673
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
+ K + + + A + D+ ++ K L + NP H FAN++L
Sbjct: 674 TYQKALSLRPSTKLLYNLA--LSYWWQSDSIHTKKTLKTLLSI----NPKHYFANQLLAD 727
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+L G +++A ++ L K NN IS
Sbjct: 728 ISLIEGDLEQAIALYVPLVKTNNQSIDISN 757
>gi|94267014|ref|ZP_01290659.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93452288|gb|EAT02929.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 585
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 53/145 (36%), Gaps = 13/145 (8%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
E + A + +++ + ++++++ +A+I +
Sbjct: 223 QWSAAMAREAAETYEMA------GRYEESLRLYRQVVAENPADERT--RGLLANIYLRLE 274
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQF 163
A + ++ + ++ L A ILVD Y E +L + P
Sbjct: 275 RVDEALDELAELRHYSDDVASI----DLTIARILVDEQRYAEAIALLPGILGE-EPRLDA 329
Query: 164 ANEILGISALKFGKVQKAKTIFEEL 188
+L ++ + G++ +A+ + EE+
Sbjct: 330 VRSLLVLAHYRQGQIDRARELLEEI 354
>gi|32477873|ref|NP_870867.1| type IV fimbrial biogenesis protein PilF [Rhodopirellula baltica SH
1]
gi|32448430|emb|CAD77945.1| probable type IV fimbrial biogenesis protein PilF [Rhodopirellula
baltica SH 1]
Length = 242
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 55/189 (29%), Gaps = 41/189 (21%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF---- 112
A + ++A FE+ D + +++ A + D +A E +
Sbjct: 64 IETAKTVAQKGHAEEALKLFERAEELDPTAMSLDADL--APLYAEVRDHDSAIERYKLCV 121
Query: 113 ------------------------LKVANDDLAPLAVRYAATLQAASILVD--TSSYEEI 146
+A L++ +V + +
Sbjct: 122 QRMPDDAELINNYAWTLMEAGRFEQAIAEASSGVQKFPEDTRLRSTLAMVHYRNGDHAKS 181
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+ + L+ H L + + G V A+ + +D + +R+ +++
Sbjct: 182 FQHWE-LAIGKTAAHHN----LALLDIDAGNVDSAREHLRQAKQDPE----LDSRANVMM 232
Query: 207 ANIIASDQR 215
A S Q+
Sbjct: 233 AAFETSSQK 241
>gi|206577250|ref|YP_002236108.1| cellulose synthase operon protein C [Klebsiella pneumoniae 342]
gi|206566308|gb|ACI08084.1| cellulose synthase operon protein C [Klebsiella pneumoniae 342]
Length = 1159
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 14/167 (8%)
Query: 41 LFDGSHEKKKNIVGENFA-QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
D E + + + QA +L +S A + ++ D+ Y+ + +A
Sbjct: 561 WTDNIRELEARLQSDRVLRQANQLRDSGNEAQAIALIQQ--QPDSVRYD----LTLADWA 614
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE-PSN 158
+GD++ A + +V + A L A + + + + +L +
Sbjct: 615 QQRGDSQTAIADYQRVLRQEADNGD----ARLGLAEVYLAEGDKQAARAQVMQLKGAETE 670
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
M+ L + L G A+ IF ++ + + ++
Sbjct: 671 SMNMQRRVALARAGL--GDTADAQQIFNQIVPQAKAQPPSMESALVL 715
>gi|28868639|ref|NP_791258.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213971520|ref|ZP_03399631.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
tomato T1]
gi|301386125|ref|ZP_07234543.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
tomato Max13]
gi|302060175|ref|ZP_07251716.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
tomato K40]
gi|302135118|ref|ZP_07261108.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28851877|gb|AAO54953.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213923712|gb|EEB57296.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
tomato T1]
gi|331019382|gb|EGH99438.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 252
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 68/184 (36%), Gaps = 9/184 (4%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQ-ALELFNSNKLDDARSSFEKILSQDNKL 86
++++ + + + + + Q L F + + A+ +K L D+
Sbjct: 11 AVVLLTGCVSTGNVNPMTTTQGREEARRAYVQLGLGYFEQGQTERAKVPLKKALELDSSD 70
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
+ + A + + + + A + F K + S L + Y+E
Sbjct: 71 AQANAAL--ALVFQTEMEPQLAEQYFRKALASSNNETRIVN----NYGSFLFEQKRYQEA 124
Query: 147 SKILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIF-EELAKDNNSPFGISTRSQM 204
+ ++ + + P E LG+++LK G ++A+ F + L D P + +Q+
Sbjct: 125 YERFEQAAADNLYPERSRVFESLGMTSLKLGNREQAREQFTKALRLDRQQPRSLLEMAQL 184
Query: 205 ILAN 208
+
Sbjct: 185 YYED 188
>gi|99079895|ref|YP_612049.1| thioredoxin domain-containing protein [Ruegeria sp. TM1040]
gi|99036175|gb|ABF62787.1| Thioredoxin domain [Ruegeria sp. TM1040]
Length = 311
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 10/155 (6%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A + + + +GE A ++ DA F IL +D+K S +
Sbjct: 122 AFLQKMAEAAGSTADGGLGEALETAEQMLEEGAAADAAQVFAAILGEDDKNAAAYSGLAR 181
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
+ + + D A + AP + AA ++AA ++ + E + + +L
Sbjct: 182 CHVAMGELDQAEAVL--------NGAPAEISTAAEIEAAHAQIELARQAENAGPVAELRA 233
Query: 154 SEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+ +NP A L + G + A T EL
Sbjct: 234 AVDANPDDHQARFDLAQALHAAGDAEAAVTELLEL 268
>gi|254805651|ref|YP_003083872.1| hypothetical protein NMO_1727 [Neisseria meningitidis alpha14]
gi|254669193|emb|CBA07957.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
Length = 477
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ M +A+ L
Sbjct: 98 YLQQAQQDKMLALYAQGILAQTDGRVKEAISHYRELIAAQPDAPAV--RMRLAAALFDNR 155
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 156 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 191
>gi|89094909|ref|ZP_01167841.1| TPR domain protein [Oceanospirillum sp. MED92]
gi|89080866|gb|EAR60106.1| TPR domain protein [Oceanospirillum sp. MED92]
Length = 564
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+ AL + + + A +F +L + + N Y+ I AKGD + A + + V
Sbjct: 284 TYYLALLMLENEAPESALKAFNHLLELKPE--DTSPNFYLGHIAQAKGDKETAIKHYSAV 341
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
+N + ++ +A +L D++ E++ IL +
Sbjct: 342 SNGNNVLQSLS-----RAIGLLNDSAEREKVESILSE 373
>gi|116622427|ref|YP_824583.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225589|gb|ABJ84298.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 783
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 9/129 (6%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L K DA +IL + + + A+ L+ KGD A + V
Sbjct: 334 LMRQGKRSDAAEVNAQILKEVPD--DNDARGLSATFLLDKGDVAKALQELQAVVTRAPEN 391
Query: 123 LAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
R AA +E+ + K + P + A L + G+ + A
Sbjct: 392 PVSRYNLGRAHAA-----RGEWEQARQQFAK-AIELRPDYVLARLALAQLQVTRGEFEAA 445
Query: 182 KTIFEELAK 190
EE+ K
Sbjct: 446 LKTAEEILK 454
>gi|294788409|ref|ZP_06753652.1| tetratricopeptide repeat protein [Simonsiella muelleri ATCC 29453]
gi|294483840|gb|EFG31524.1| tetratricopeptide repeat protein [Simonsiella muelleri ATCC 29453]
Length = 389
Score = 35.7 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 65/179 (36%), Gaps = 10/179 (5%)
Query: 20 CYKWIAPLLILMILSLAIWFYLFDGSHE--KKKNIVGENFAQALELFNSNKLDDARSSFE 77
+ + P+ +L I WF K+ + F +L+ A +
Sbjct: 5 IWWLLVPIALLPIFFAMGWFAARVDMKTVLKQAKTIPSGFYNSLDALVDKNTGKAARNLA 64
Query: 78 KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN--DDLAPLAVRYAATLQAAS 135
+++ Q Y+ N+ + + +G+ A + + N D + R L
Sbjct: 65 EVIDQQQGSYDL--NLTLGKLYRQRGENDKAIAMHKTLLNSPDTVGEKHERVLYEL---G 119
Query: 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ ++ + ++ + + N M + ANE+L + +KA + L+ DN +
Sbjct: 120 LNYQSAGLVDRAEQIFIELQKGN-MAKQANEVLLNIYQQDRDWEKAIATAQLLSHDNQT 177
>gi|195115032|ref|XP_002002071.1| GI17182 [Drosophila mojavensis]
gi|193912646|gb|EDW11513.1| GI17182 [Drosophila mojavensis]
Length = 598
Score = 35.7 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 53/152 (34%), Gaps = 36/152 (23%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLK 114
F +A F+ K D+ ++ + + Y + + + + G ++ F
Sbjct: 271 FIRARRAFDEQKYDEIIAACTEEIESSEAESQYKVEALLMRGTFHLLCGSFADSKLDFDA 330
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
+ + A + +R A ++ A++ + ++ + + L+
Sbjct: 331 ILANADADITLRTYAYIRRAALFI------QMEEREKGLA-------------------- 364
Query: 175 FGKVQKAKTIFEELAKDNNSPFGISTRSQMIL 206
+A+ + ++P R+Q++L
Sbjct: 365 --DFAEAEKL------KPDNPDVYHQRAQILL 388
>gi|148689136|gb|EDL21083.1| mCG16149 [Mus musculus]
Length = 571
Score = 35.7 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 64/191 (33%), Gaps = 27/191 (14%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K + + ++L+ + +++ ++ + + L + A + +
Sbjct: 149 YWQFVGKDKGAMATEYFESLKQYENSEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 208
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV----DTSS-YEEISKILQKLSEP 156
+ + EI + A D P + L + D Y++ +I +
Sbjct: 209 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFGDAEQLYKQALEISENAYGA 262
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE---LAKDNNSPFG--------ISTRSQ 203
+P A E+ ++ K K ++A F + + + + + R+
Sbjct: 263 DHP--HAARELEALATLYHKQNKYEQA-EHFRKKSVIIRQQATRRKGSLYGFALLRRRAL 319
Query: 204 MILANIIASDQ 214
+ + D+
Sbjct: 320 QLEELTLGKDK 330
>gi|172062965|ref|YP_001810616.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
gi|171995482|gb|ACB66400.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
MC40-6]
Length = 285
Score = 35.7 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 57/160 (35%), Gaps = 9/160 (5%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
L++ + ++ +G A +LD+A + +L+ L PL+ + ++L
Sbjct: 95 LYEQARQQAPADLGPQLGLARVALRQRRLDEAAQRYRDLLAAQPNL--PLAAQGLGTVLD 152
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE-PSNP 159
+G +A ++ N +R + LV ++ + +L ++ P P
Sbjct: 153 LQGRHADAQAVYRDALNAHPDAQGLR----IDLGLSLVLSNRPRDGVNVLLDVAGLPDAP 208
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIS 199
A + L + G AK + + +
Sbjct: 209 WQ--ARQNLAFAYGVLGNTDSAKKLLSADLPASAVADNLR 246
>gi|94968709|ref|YP_590757.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94550759|gb|ABF40683.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
Length = 1127
Score = 35.7 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 16/141 (11%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNP---LSNMYIASILVAKGDTKNAAEIFL 113
+ + L N KL ++ ++ K K L + + G A E F
Sbjct: 68 LDKGIALLNLQKLPESEAALNKAGEAMPKNPRVWYNLGLLNRGA-----GKYDAAIENFN 122
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+V D Y + + + + YE+ + + NP+H A L +
Sbjct: 123 RVTTIDPNDSDTFYM--IGSLYLQLQK--YEDAIGAYKS-ALKINPLHASAEFGLAKALQ 177
Query: 174 KFGKVQKAKT---IFEELAKD 191
+ GKV++A+ IFE L KD
Sbjct: 178 RAGKVEEARDHLHIFEHLTKD 198
>gi|77164418|ref|YP_342943.1| tfp pilus assembly protein PilF [Nitrosococcus oceani ATCC 19707]
gi|76882732|gb|ABA57413.1| tfp pilus assembly protein PilF [Nitrosococcus oceani ATCC 19707]
Length = 246
Score = 35.7 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 54/149 (36%), Gaps = 14/149 (9%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNK---LYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
+E F +L+ A E+ + QD K YN L+ + G + A + F +
Sbjct: 36 VEYFKQGELEQALKKLERAIQQDPKLPSAYNALALLKQ-----RLGQAEEAEKYFQRAIK 90
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKI-LQKLSEPSNPMHQFANEILGISALKFG 176
A L + Y + L+ + P + A E G++A K
Sbjct: 91 ---LDPEYSE-AQNNYGVFLYNQGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKQV 146
Query: 177 KVQKAKTIFEE-LAKDNNSPFGISTRSQM 204
+ KA+ + + L + P + +++
Sbjct: 147 EFDKAERYYRKALQLEPRLPKSLYHMAEI 175
>gi|114890|sp|P19450|BCSC1_ACEXY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
gi|141734|gb|AAA21886.1| bcs C protein [Gluconacetobacter xylinus]
Length = 1319
Score = 35.7 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ G A ++ ++ A + ILS++ L+ M +A + +A+G+T
Sbjct: 399 RQPGQYTGATLMLADLQRSTGQIAAAEQEYRGILSREPNN--QLALMGLARVDMAQGNTA 456
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A ++ +V + + + L AA+ S+ + P +P
Sbjct: 457 EARQLLSRVGPQYASQVGEIEVSGLMAAASQTSDSARKVSILREAMAQAPRDPW---VRI 513
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
L + + G V +A + + + + +
Sbjct: 514 NLANALQQQGDVAEAGRVMQPILANPVTAQD 544
>gi|300114393|ref|YP_003760968.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
C-113]
gi|299540330|gb|ADJ28647.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
C-113]
Length = 931
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 6/101 (5%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
N G F A L K ++A+ ++ + + ++ A + + + A E
Sbjct: 678 NHAGARFVMARLLMQEGKQEEAKKQLRELKRT-HLNQPEVIDL-EAQLALQQNQPSEAIE 735
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
I+ K ND L+ A I T ++ L+
Sbjct: 736 IYQKAHNDFPDSNRW----PLKLAQIQWQTGKQKDSLATLE 772
>gi|167579766|ref|ZP_02372640.1| TPR domain protein [Burkholderia thailandensis TXDOH]
Length = 573
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D ++
Sbjct: 337 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKTDEARKLLANLQASDPHDAAVIAR-TD 395
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
ASIL A K AA+ + D +R
Sbjct: 396 ASILFASKRYKEAADRLAQAVEDFPDDPDLR 426
>gi|167562551|ref|ZP_02355467.1| hypothetical protein BoklE_08314 [Burkholderia oklahomensis EO147]
Length = 209
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 3/163 (1%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ ++ + + Q + SN + + A+
Sbjct: 38 WNGWNYWQRHQAAQAAVLYEQVQQAVQSNDKAKVARVASDMEDKFGGTAYAQMTALEAAK 97
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+ A+ L+ A D + A L+ AS+L+D +Y+ +L PS+
Sbjct: 98 ALYGAGDAAGAKAQLQWAADHAKDDEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPSD 155
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ G GK A+ + +LA D+ S S R
Sbjct: 156 AFKGIVADRRGDLLASQGKSDDARAAY-KLALDSLSKDDASAR 197
>gi|116623643|ref|YP_825799.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226805|gb|ABJ85514.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 548
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 10/167 (5%)
Query: 44 GSHEKKKNIVGEN--FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ N L AR+S+E L+ D L N+ A +L
Sbjct: 290 YRQAASLQPSSAQSHLNLGVAQQELNDLAGARASYEHALNIDPNQSGVLWNL--ALVLEQ 347
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+G+ + A +++ ++ D A + + + Y ++ +
Sbjct: 348 QGERQWAEKLYARINEDAP---EWGD-ACFRLGYLRLLRGDYINSAEAFEACLAHRLDW- 402
Query: 162 QFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILA 207
A+ GI+ + G A+ F+E L +S + + + L
Sbjct: 403 PEAHLNAGIAYARNGNAPAARKSFQEVLTLRPDSSDAVRGLAALALE 449
>gi|319899204|ref|YP_004159297.1| Tetratricopeptide repeat protein [Bartonella clarridgeiae 73]
gi|319403168|emb|CBI76727.1| Tetratricopeptide repeat protein [Bartonella clarridgeiae 73]
Length = 561
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F AL L + D+A + + + + A+I + K + A +I +
Sbjct: 344 QFQLALTLAENGNHDEAIKLLTLLEKKFPNDRHIFITL--AAIYMQKNNFSEAIKILDQA 401
Query: 116 AN 117
Sbjct: 402 IA 403
>gi|217419730|ref|ZP_03451236.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|226199577|ref|ZP_03795134.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
Pakistan 9]
gi|254187796|ref|ZP_04894308.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
52237]
gi|254296086|ref|ZP_04963543.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|157805914|gb|EDO83084.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|157935476|gb|EDO91146.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
52237]
gi|217397034|gb|EEC37050.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|225928458|gb|EEH24488.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
Pakistan 9]
Length = 606
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 370 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDPRDAAVIAR-TD 428
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
ASIL K AA+ + D +RY A Y + + L+ L
Sbjct: 429 ASILFTSKRYKEAADRLAQAVEDFPDDPDLRY----DYAMASEKIGQYTTMEQQLRLLMR 484
Query: 154 SEPSNPMHQFA 164
++P NP A
Sbjct: 485 AQPDNPQAYNA 495
>gi|107023732|ref|YP_622059.1| hypothetical protein Bcen_2185 [Burkholderia cenocepacia AU 1054]
gi|116690819|ref|YP_836442.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424]
gi|105893921|gb|ABF77086.1| Tetratricopeptide TPR_2 [Burkholderia cenocepacia AU 1054]
gi|116648908|gb|ABK09549.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia
HI2424]
Length = 607
Score = 35.3 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 374 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDNLPISDPRDAAVVAR-TDASI 432
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + D +RY + A T Y + K L++L ++P
Sbjct: 433 LFTAKRYPEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYATMEKQLRELIRTQP 488
Query: 157 SNPMHQFANEILGIS-ALKFGKVQKAKTIFEE 187
NP A LG S A + ++ +A + ++
Sbjct: 489 DNP---QAYNALGYSLADRNQRLPEASKLIDK 517
>gi|317484819|ref|ZP_07943714.1| hypothetical protein HMPREF0179_01066 [Bilophila wadsworthia 3_1_6]
gi|316923926|gb|EFV45117.1| hypothetical protein HMPREF0179_01066 [Bilophila wadsworthia 3_1_6]
Length = 228
Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 18/61 (29%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
QA L K +A + F+ + + P A G A + +
Sbjct: 143 AINQADLLQRQGKYAEALAVFDSLEKSAPESLRPAILEGQAMSAELAGKLDRALAAYESI 202
Query: 116 A 116
A
Sbjct: 203 A 203
>gi|292493243|ref|YP_003528682.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus
Nc4]
gi|291581838|gb|ADE16295.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus
Nc4]
Length = 930
Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 10/137 (7%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L + NK ++A F+++ + L+ + + + + A F +
Sbjct: 690 LMHENKPNEANKLFQELKQAYPEHPEVLA--QEGWLAMRQNQPQKAVAAFKEALKHSPTS 747
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+ A Q + D S + L+K E A L L + Q+A
Sbjct: 748 QIIVNLALAQFQAGNQDR-SLATLEDWLKKHPED-----MLAQYNLANLYLALKQEQEAV 801
Query: 183 TIFEELAKDNNSPFGIS 199
+ F ++ + +P ++
Sbjct: 802 SAFAKVVE--QAPNNVT 816
>gi|167901247|ref|ZP_02488452.1| tetratricopeptide repeat protein [Burkholderia pseudomallei NCTC
13177]
Length = 526
Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 290 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDPRDAAVIAR-TD 348
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
ASIL K AA+ + D +RY A Y + + L+ L
Sbjct: 349 ASILFTSKRYKEAADRLAQAVEDFPDDPDLRY----DYAMASEKIGQYTTMEQQLRLLMR 404
Query: 154 SEPSNPMHQFA 164
++P NP A
Sbjct: 405 AQPDNPQAYNA 415
>gi|149923466|ref|ZP_01911869.1| serine/threonine kinase PKN8 [Plesiocystis pacifica SIR-1]
gi|149815657|gb|EDM75186.1| serine/threonine kinase PKN8 [Plesiocystis pacifica SIR-1]
Length = 1489
Score = 35.3 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
A+A L D + + F K+ N+ + + A++L G + AA ++ +
Sbjct: 855 ARAETLAMVGLADQSAAMFTKLARLANEDSARSARVRSAALLERSGARERAAALYEQAG- 913
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
P ++ +A I D +E+ +I ++L+E + H E +
Sbjct: 914 ---VPSSLE-----RALEIYRDLHQFEDARRIAERLAEGGDAAHLA--EAQTLRRW 959
>gi|188996786|ref|YP_001931037.1| hypothetical protein SYO3AOP1_0855 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931853|gb|ACD66483.1| hypothetical protein SYO3AOP1_0855 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 210
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 62/163 (38%), Gaps = 14/163 (8%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ--DNKLYNP-LSN 92
+ Y + ++ + ++ +L + NKL+DAR E Q + + Y L+
Sbjct: 45 SGGLYYKNQVDKQNREKASLYLSKITDLLSENKLEDARKELENFKKQYGNTEFYKVALAY 104
Query: 93 MYIASILVAKGDTKNAAEIFLKVAND--DLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
+ + K + + A ++ ++ D + A + + +E +IL
Sbjct: 105 EILINKEENKENKEPAEKLKNELKTDLSSGVNEYL--------AYLKNKEGNSKEAKEIL 156
Query: 151 QKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
+ + A + + K G Q+A+ IFE + + N
Sbjct: 157 KSIDSKKYNY-ISAQTLYALILKKEGNFQEAQKIFETIKNNQN 198
>gi|187736458|ref|YP_001878570.1| Sel1 domain protein repeat-containing protein [Akkermansia
muciniphila ATCC BAA-835]
gi|187426510|gb|ACD05789.1| Sel1 domain protein repeat-containing protein [Akkermansia
muciniphila ATCC BAA-835]
Length = 362
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 10/142 (7%)
Query: 60 ALELFNSNKLDDARSSFEKILSQD-NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
A+ S K DA F++ + Y ++ +Y K D K A E+ K
Sbjct: 214 AVRAMGSKKYKDAFECFQQAAELGCPRGYWGMAFLYDQGKYGVKRDKKKAEEMHRKAGAA 273
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA-LKFG- 176
AP A R+ A A+ ++ Q + +A+E + + G
Sbjct: 274 GYAPSASRFGAAWPDAARVL---GLTAAEAREQSRTRRRAAAEGYASEQYNLGVMYQTGF 330
Query: 177 ----KVQKAKTIFEELAKDNNS 194
+ KA+ F++ A +
Sbjct: 331 GLPKDMAKAREWFQKAADQGDV 352
>gi|86357755|ref|YP_469647.1| adenylate cyclase [Rhizobium etli CFN 42]
gi|86281857|gb|ABC90920.1| probable adenylate cyclase (possibly two-component response
regulator) protein [Rhizobium etli CFN 42]
Length = 502
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 9/132 (6%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
N G + A L + +A + F K + D + + + ++L G E
Sbjct: 336 NDAGCRWVLAYLLAYARDFAEADAQFAKAIELDPNEADTFAALSDITVLA--GRIDEGLE 393
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
K + P + Y A QA E+ ++ L + L
Sbjct: 394 HARKAFRLNPFPASWYYLALGQAQYAA------EQYEAAIETLRRD-ETYRTSSRRFLAA 446
Query: 171 SALKFGKVQKAK 182
S + G++ +A+
Sbjct: 447 SLAQLGRLDEAR 458
>gi|310814831|ref|YP_003962795.1| thioredoxin [Ketogulonicigenium vulgare Y25]
gi|308753566|gb|ADO41495.1| thioredoxin [Ketogulonicigenium vulgare Y25]
Length = 298
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 6/130 (4%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G A E+ DA + + ++ + + + A++ D A +
Sbjct: 127 GAALDAADEMMEQGAFADATEIYNAVSQEEPENARAYAGLVSAALAQNDLDGAEAV-LNG 185
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
A +P A L+ A +++ + ++P + A L +
Sbjct: 186 APAVIAKSPELEAVRARLELARQAASAGPVDDLRA-----AVAADPANLQALFDLATALH 240
Query: 174 KFGKVQKAKT 183
G VQ A
Sbjct: 241 ASGDVQGAVD 250
>gi|52842259|ref|YP_096058.1| outer membrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52629370|gb|AAU28111.1| outer membrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 322
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 48 KKKNIVGEN--FAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGD 104
+ N E + A EL + + D+A S + + + Y + ++ + + K D
Sbjct: 192 SRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKD 251
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAAT-LQAASILVDTSSYEEISKILQKL--SEPSNPMH 161
A E F V P + + AA+ L++ + +E K Q++ + P P
Sbjct: 252 YSKAIEHFEIVLQQ--YPSSSKAAASLLKSGYAYAEKGDKQEAKKRFQQVVKTYPDTPTA 309
Query: 162 QFA 164
Q A
Sbjct: 310 QLA 312
>gi|294664902|ref|ZP_06730219.1| C-type cytochrome biogenesis protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605333|gb|EFF48667.1| C-type cytochrome biogenesis protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 337
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 12/166 (7%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G A L LD+A + L + + + + L ++ A + F
Sbjct: 53 GAMTQPATRLSTPRSLDEAIAQLRAALVSNPEQAEGWVLLGRS--LSSQQKFAEARDAFA 110
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ V A QA + D+ + + L + + P HQ A LG+
Sbjct: 111 RAVALRPDEADVL-VAAAQARMLADDSGRPDPEAMRLLQHALAVQPDHQRARWFLGVVQR 169
Query: 174 KFGKVQKAKTIFEELAK--DNNSPFGISTRSQMILANIIASDQRNK 217
+ G+ KA +E L D+ + G+ L I A+ Q +
Sbjct: 170 QAGEPDKASATWEPLLSVVDSKTRPGL-------LEQINAARQEAR 208
>gi|294625431|ref|ZP_06704062.1| C-type cytochrome biogenesis protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600254|gb|EFF44360.1| C-type cytochrome biogenesis protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 337
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 12/166 (7%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G A L LD+A + L + + + + L ++ A + F
Sbjct: 53 GAMTQPATRLSTPRSLDEAIAQLRAALVSNPEQAEGWVLLGRS--LSSQQKFAEARDAFA 110
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+ V A QA + D+ + + L + + P HQ A LG+
Sbjct: 111 RAVALRPDEADVL-VAAAQARMLADDSGRPDPEAMRLLQHALAVQPDHQRARWFLGVVQR 169
Query: 174 KFGKVQKAKTIFEELAK--DNNSPFGISTRSQMILANIIASDQRNK 217
+ G+ KA +E L D+ + G+ L I A+ Q +
Sbjct: 170 QAGEPDKASATWEPLLSVVDSKTRPGL-------LEQINAARQEAR 208
>gi|255038084|ref|YP_003088705.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950840|gb|ACT95540.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 648
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 13/120 (10%)
Query: 103 GDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL---SEPSNP 159
G+ A + F K A ++ P +Q + ++ ++ K +
Sbjct: 14 GEYDLAIKGFQKAAEANIEP--------VQTSYLIAESYRLSNRFKEAIPYYKKALDGGI 65
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD--QRNK 217
+ A + G+ A F E AK N+P + R+ + I +D + NK
Sbjct: 66 TNPDARFQYAYALKTTGEYADASAQFSEFAKTQNAPQNLQERALREVEIIRIADRLKANK 125
>gi|53718164|ref|YP_107150.1| hypothetical protein BPSL0525 [Burkholderia pseudomallei K96243]
gi|53724081|ref|YP_104601.1| TPR domain-containing protein [Burkholderia mallei ATCC 23344]
gi|76810361|ref|YP_332170.1| hypothetical protein BURPS1710b_0757 [Burkholderia pseudomallei
1710b]
gi|121600080|ref|YP_991436.1| TPR domain-containing protein [Burkholderia mallei SAVP1]
gi|124385353|ref|YP_001027488.1| TPR domain-containing protein [Burkholderia mallei NCTC 10229]
gi|126439979|ref|YP_001057625.1| TPR repeat-containing protein [Burkholderia pseudomallei 668]
gi|126448388|ref|YP_001082454.1| TPR domain-containing protein [Burkholderia mallei NCTC 10247]
gi|126452823|ref|YP_001064871.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a]
gi|134279447|ref|ZP_01766159.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
gi|237810775|ref|YP_002895226.1| TPR domain protein [Burkholderia pseudomallei MSHR346]
gi|238561327|ref|ZP_00442181.2| TPR domain protein [Burkholderia mallei GB8 horse 4]
gi|242314624|ref|ZP_04813640.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|251767334|ref|ZP_04820068.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
gi|254174735|ref|ZP_04881396.1| TPR domain protein [Burkholderia mallei ATCC 10399]
gi|254181863|ref|ZP_04888460.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
gi|254207022|ref|ZP_04913373.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
gi|254258660|ref|ZP_04949714.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
gi|254357501|ref|ZP_04973775.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
gi|52208578|emb|CAH34514.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|52427504|gb|AAU48097.1| TPR domain protein [Burkholderia mallei ATCC 23344]
gi|76579814|gb|ABA49289.1| putative membrane protein [Burkholderia pseudomallei 1710b]
gi|121228890|gb|ABM51408.1| TPR domain protein [Burkholderia mallei SAVP1]
gi|124293373|gb|ABN02642.1| TPR domain protein [Burkholderia mallei NCTC 10229]
gi|126219472|gb|ABN82978.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 668]
gi|126226465|gb|ABN90005.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
gi|126241258|gb|ABO04351.1| TPR domain protein [Burkholderia mallei NCTC 10247]
gi|134248647|gb|EBA48729.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
gi|147752564|gb|EDK59630.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
gi|148026565|gb|EDK84650.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
gi|160695780|gb|EDP85750.1| TPR domain protein [Burkholderia mallei ATCC 10399]
gi|184212401|gb|EDU09444.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
gi|237504659|gb|ACQ96977.1| TPR domain protein [Burkholderia pseudomallei MSHR346]
gi|238524787|gb|EEP88218.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
gi|242137863|gb|EES24265.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|243063113|gb|EES45299.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
gi|254217349|gb|EET06733.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
Length = 606
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 370 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDPRDAAVIAR-TD 428
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
ASIL K AA+ + D +RY A Y + + L+ L
Sbjct: 429 ASILFTSKRYKEAADRLAQAVEDFPDDPDLRY----DYAMASEKIGQYTTMEQQLRLLMR 484
Query: 154 SEPSNPMHQFA 164
++P NP A
Sbjct: 485 AQPDNPQAYNA 495
>gi|12852213|dbj|BAB29319.1| unnamed protein product [Mus musculus]
Length = 582
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 64/191 (33%), Gaps = 27/191 (14%)
Query: 42 FDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA 101
+ K K + + ++L+ + +++ ++ + + L + A + +
Sbjct: 149 YWQFVGKDKGAMATEYFESLKQYENSEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQ 208
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV----DTSS-YEEISKILQKLSEP 156
+ + EI + A D P + L + D Y++ +I +
Sbjct: 209 R-----SLEI-RETALDPDHPRVAQSLHQLAGVYVQWKKFGDAEQLYKQALEISENAYGA 262
Query: 157 SNPMHQFANEILGIS--ALKFGKVQKAKTIFEE---LAKDNNSPFG--------ISTRSQ 203
+P A E+ ++ K K ++A F + + + + + R+
Sbjct: 263 DHP--HAARELEALATLYHKQNKYEQA-EHFRKKSVIIRQQATRRKGSLYGFALLRRRAL 319
Query: 204 MILANIIASDQ 214
+ + D+
Sbjct: 320 QLEELTLGKDK 330
>gi|219122591|ref|XP_002181625.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406901|gb|EEC46839.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 640
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 34/240 (14%), Positives = 65/240 (27%), Gaps = 76/240 (31%)
Query: 40 YLFDGSHEKKKNIVGENFAQALELFNSN--------------------------KLDDAR 73
+++ ++F QA L +N KLD+A
Sbjct: 322 RGRRHVYDRAFENASDDFEQAYALAETNEVQLLLEGDDYARVLEWTGMVKHWRYKLDEAS 381
Query: 74 SSFEKILSQDNKLYNPL--------------------------------SNMYIASILVA 101
+ +EK + L + ++ A++ +
Sbjct: 382 ACYEKCADLEPTNALVLVKNAGVKMDGSHQDEAMKLFDTALGLDPKNADALLHRANLRLL 441
Query: 102 KGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE------EISKILQKLSE 155
+ A E A L+ ASIL T+ + ++ ++ S
Sbjct: 442 QTKPDEAKEDLEACIAVRPD----HIMARLRLASILAATNEAAKAKKHLDAAEKVEPKSS 497
Query: 156 PSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILANIIASDQ 214
G G+ +A+ FE+ +A D +P + IL Q
Sbjct: 498 EVQSYR-------GELHFTQGEFDQARAQFEKAIALDPTNPTPYVNAAMAILQTPPPPGQ 550
>gi|167909465|ref|ZP_02496556.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 112]
Length = 581
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 345 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDPRDAAVIAR-TD 403
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
ASIL K AA+ + D +RY A Y + + L+ L
Sbjct: 404 ASILFTSKRYKEAADRLAQAVEDFPDDPDLRY----DYAMASEKIGQYTTMEQQLRLLMR 459
Query: 154 SEPSNPMHQFA 164
++P NP A
Sbjct: 460 AQPDNPQAYNA 470
>gi|116205395|ref|XP_001228508.1| hypothetical protein CHGG_10581 [Chaetomium globosum CBS 148.51]
gi|88176709|gb|EAQ84177.1| hypothetical protein CHGG_10581 [Chaetomium globosum CBS 148.51]
Length = 1079
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
E+ + +L ++P A EIL ++ + G V+KA +
Sbjct: 853 EQSVTAVARLQGDNSPEAALAKEILALTEWRVGNVEKALKL 893
>gi|315123546|ref|YP_004065552.1| putative unknown membrane associated protein [Pseudoalteromonas sp.
SM9913]
gi|315017306|gb|ADT70643.1| putative unknown membrane associated protein [Pseudoalteromonas sp.
SM9913]
Length = 442
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNK--LYNPLSNMYI--ASILVAKGDT 105
+ V A+A +L + ++ + I ++ + Y ++ M+ I + D
Sbjct: 56 REKVYSQLARAQKLADDGDSKAGLAALDSIQARSSSMNSYE-IAMMHNFYGFIYYNENDL 114
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
A F KV +D P +R + T A + + S Y+++
Sbjct: 115 VKAIASFEKVIAEDGIPETLRLSTTFSLAQLAMANSDYKKVIA 157
>gi|183980638|ref|YP_001848929.1| transcriptional regulatory protein [Mycobacterium marinum M]
gi|183173964|gb|ACC39074.1| transcriptional regulatory protein [Mycobacterium marinum M]
Length = 817
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 9/122 (7%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
G A L + A +++L + + AS+ +G
Sbjct: 313 YRAAVAAGATGLKSQLADALARTGDCAGAAELADELLGSADSAQRAAAVRIAASVAAHEG 372
Query: 104 DTKNAAEIF-------LKVANDDLA--PLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
+ AAE+F V A AV T +AA + DT ++ + L+
Sbjct: 373 NAGQAAELFGWLGPYPDAVVGSSAAIVLAAVGDLQTARAALDVKDTGPPTMAARAARGLA 432
Query: 155 EP 156
+
Sbjct: 433 DG 434
>gi|167718020|ref|ZP_02401256.1| tetratricopeptide repeat protein [Burkholderia pseudomallei DM98]
Length = 579
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 343 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDPRDAAVIAR-TD 401
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
ASIL K AA+ + D +RY A Y + + L+ L
Sbjct: 402 ASILFTSKRYKEAADRLAQAVEDFPDDPDLRY----DYAMASEKIGQYTTMEQQLRLLMR 457
Query: 154 SEPSNPMHQFA 164
++P NP A
Sbjct: 458 AQPDNPQAYNA 468
>gi|115403015|ref|XP_001217584.1| hypothetical protein ATEG_08998 [Aspergillus terreus NIH2624]
gi|114189430|gb|EAU31130.1| hypothetical protein ATEG_08998 [Aspergillus terreus NIH2624]
Length = 522
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 9/165 (5%)
Query: 31 MILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL 90
+ L+L Y S + A A S DA F+ +++D Y L
Sbjct: 10 VFLALCSTGYGLQASEIPADTPLSSLVASAKSHLASGSARDALLYFDAAIARDPTNY--L 67
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAATLQAASILVDTSSYEEISKI 149
+ + ++ A E F +V A+ + L+A+S T + +++K
Sbjct: 68 TIFQRGAAYLSLRRNTQALEDFDRVLELKPDFESALLQRSRLRASSADW-TGALSDLAKA 126
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+K S P + A + +ALK K + K + + + N +
Sbjct: 127 GKK-SSPEYAELEEARD----AALKAQKAEDRKQWDDCITQANVA 166
>gi|83647148|ref|YP_435583.1| hypothetical protein HCH_04454 [Hahella chejuensis KCTC 2396]
gi|83635191|gb|ABC31158.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 217
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 11/174 (6%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQ------ALELFNSNKLDDARSSFEKIL 80
+ I + L+ + ++ + +KK + + + A ++ + K + L
Sbjct: 27 IGIGLALAAIFGWKAYNQNELQKKEEASQMYQELVQAAGAAQMADDEKSQANITFLATEL 86
Query: 81 SQDNKL--YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV 138
Y + +Y A VAK D A VA++ A++ +L+ A +L
Sbjct: 87 QSKFPGTTYALYAKLYEAQQAVAKKDFAGAETALKAVASETE-DEALKRVVSLRLARVLA 145
Query: 139 DTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN 192
+++ L+ ++ + + E+ G G +AK +E+ D
Sbjct: 146 AQQKFDDALAALK--AQKGDVFYSHFQELAGDILKMKGSRAEAKAAYEQALADA 197
>gi|163739842|ref|ZP_02147249.1| Thioredoxin domain [Phaeobacter gallaeciensis BS107]
gi|161386876|gb|EDQ11238.1| Thioredoxin domain [Phaeobacter gallaeciensis BS107]
Length = 311
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 10/130 (7%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
A ++ + DA +F +L +D+K + A + D A
Sbjct: 142 AIEAAEQMLTDGDVADAAQTFAAVLGEDDKNAAAYGGLARAHVAKGDLDQAEAVL----- 196
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISAL 173
+ AP + AA ++AA + + E + + +L + + P A L +
Sbjct: 197 ---NGAPAEISDAAEIEAAHAQIALARQAENAGPVAELRATVEAYPEDHQARFDLAQALH 253
Query: 174 KFGKVQKAKT 183
G+ + A
Sbjct: 254 AAGEAEAAVD 263
>gi|219849219|ref|YP_002463652.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans
DSM 9485]
gi|219543478|gb|ACL25216.1| Tetratricopeptide TPR_4 [Chloroflexus aggregans DSM 9485]
Length = 1089
Score = 35.3 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 10/157 (6%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
A A+ LF +N+LD A +F + D L+ YIA +G+ A E + +A+
Sbjct: 47 AAAVALFQTNRLDKALQAFSDLYEADPNNAFYLN--YIAQCYRRQGNIPAAVEAYSALAD 104
Query: 118 DDLAPL-AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISA--LK 174
A A++ L+ L ++ + L +L E + + A L ++ +
Sbjct: 105 LHSAQQRALQATEALRELLTLQPER--DDQRRRLAQLYEDLGAIAESAETHLELAQRFIA 162
Query: 175 FGKVQKA---KTIFEELAKDNNSPFGISTRSQMILAN 208
G+ +A L ++ ++TR + L
Sbjct: 163 RGETAEALSEVEWVLRLDANHRVARELATRLREQLGG 199
>gi|319952096|ref|YP_004163363.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
gi|319420756|gb|ADV47865.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
Length = 1005
Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 51/183 (27%), Gaps = 34/183 (18%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIAS 97
W+ D + + NF LF+S +A + K+ ++ +Y + Y+
Sbjct: 125 WYKRVDQNSLSQSEKDKFNFNYGYALFSSKNSKEAETYLNKV--TNSPVYGSQAKYYLGF 182
Query: 98 ILVAKGDTKNAAEIFLKVANDDLAPLAVR--------YAATLQAASILVDTS-------- 141
I + D A + F ++ + + + + A L T
Sbjct: 183 IAYQQDDYAGANQRFDQITDQKVLEEKLSYYQADLNFKLGKFEEAIALAKTQMQKGDRQE 242
Query: 142 ----------------SYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
YE L + LG S K G A F
Sbjct: 243 KSELNKIIGESYFNLNQYENAIPYLLDYQGRNGKFSNTDYYFLGYSYYKKGDYANAIQQF 302
Query: 186 EEL 188
++
Sbjct: 303 NKI 305
>gi|94266075|ref|ZP_01289793.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93453358|gb|EAT03789.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 585
Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 54/168 (32%), Gaps = 17/168 (10%)
Query: 33 LSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN 92
+++A ++ + +AL L + A + + Y
Sbjct: 192 MAMAHFYLARLHREMDDLPAALAAYERALAL----QWSAAMAREAAETYEMAGRYEDSLR 247
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ------------AASILVDT 140
+Y + D + + + A+ A L+ A ILVD
Sbjct: 248 LYRQVVAANPADERARGLLANIYLRLERVDEALDELAELRHYSDDVANIDLTIARILVDE 307
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
Y E +L + P +L ++ + G++ +A+ + EE+
Sbjct: 308 QRYAEAIALLPGILGE-EPRLDAVRSLLVLAHYRQGQIDRARELLEEI 354
>gi|17229291|ref|NP_485839.1| hypothetical protein alr1799 [Nostoc sp. PCC 7120]
gi|17130889|dbj|BAB73498.1| alr1799 [Nostoc sp. PCC 7120]
Length = 402
Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A+ L + K+++A ++ ++L D K S++ S++ +G + A + + D
Sbjct: 226 AIALQQTGKMEEAIVAYREVLKLDPKNAAAYSSL--GSLMAMQGRPEEAIAAYTQAVRQD 283
Query: 120 L 120
Sbjct: 284 P 284
>gi|218887207|ref|YP_002436528.1| hypothetical protein DvMF_2117 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758161|gb|ACL09060.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 207
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP 159
+ +G+ + A + K P ++ AT+ AA + YE + + + + P
Sbjct: 105 LQRGEPEEAIKALKKALK--WDPDFIQAMATMGAAYFM--QGDYEASIQ-ISREAIKREP 159
Query: 160 MHQFANEILGISALKFGKVQKAKTIFEELA 189
A L ++ + G+ +A ++ A
Sbjct: 160 GFGPAYNNLALAHFERGEFAQAVQFADQAA 189
>gi|330985012|gb|EGH83115.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 252
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 9/160 (5%)
Query: 48 KKKNIVGENFAQ-ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ + + Q L F + + A+ +K L D+ + + A + + + +
Sbjct: 31 QGREEARRAYVQLGLGYFQQGQTERAKVPLKKALELDSSDAQANAAL--ALVFQTEMEPE 88
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS-NPMHQFAN 165
A + F K + S L + Y+E + ++ + + P
Sbjct: 89 LAEQYFRKALASSNNETRIVN----NYGSFLFEQKRYKEAYERFEQAAADNLYPERSRVF 144
Query: 166 EILGISALKFGKVQKAKTIF-EELAKDNNSPFGISTRSQM 204
E LG+++LK G +A+ F + L D P + +QM
Sbjct: 145 ESLGMTSLKLGNRDQAREHFTKALRLDRQLPRSLLEMAQM 184
>gi|304312668|ref|YP_003812266.1| hypothetical protein HDN1F_30420 [gamma proteobacterium HdN1]
gi|301798401|emb|CBL46625.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 662
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 11/86 (12%)
Query: 39 FYLFDGSHEKKKNIVGENFA----QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY 94
+K N E F +A L+ K D A S +E+ N YN
Sbjct: 365 QQGQKAFEQKDWNAAAEAFQSPAWKAGALYREGKFDAASSLYEQ-QKTANGHYNM----- 418
Query: 95 IASILVAKGDTKNAAEIFLKVANDDL 120
+ L +G + A + + +
Sbjct: 419 -GNALARQGKLQEAIKAYDDALKIEP 443
>gi|195381509|ref|XP_002049491.1| GJ20720 [Drosophila virilis]
gi|194144288|gb|EDW60684.1| GJ20720 [Drosophila virilis]
Length = 916
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
QA L N+ +A S+ +++ Y + ++++L +G + A + +
Sbjct: 483 QAECLRQLNRTQEAIQSYGRVVQLAPYCYE--AKFTLSALLKQQGRPEEAVKALEQSGEQ 540
Query: 119 DLAPLAVR 126
+ PL R
Sbjct: 541 EGQPLHAR 548
>gi|311744955|ref|ZP_07718740.1| TPR repeat containing protein [Algoriphagus sp. PR1]
gi|126577462|gb|EAZ81682.1| TPR repeat containing protein [Algoriphagus sp. PR1]
Length = 471
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 13/137 (9%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KV 115
F A+ D+ +++ + QD Y+ + + + G + A + + +
Sbjct: 173 FQLAMITEEDGSFDEILDFYQEFIDQDP--YSAGAWYNLGVVYNRLGRYEEAIKAYDYAI 230
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI--LGISAL 173
D+ A + L++TS YE L+ N A +G +
Sbjct: 231 IIDESFASAYFNL-----GNALMNTSQYE---LALEAYQNTINCEGANAENCCYMGAAYE 282
Query: 174 KFGKVQKAKTIFEELAK 190
K G +++A F++ AK
Sbjct: 283 KLGNIEQAFKYFKKSAK 299
>gi|15228104|ref|NP_181260.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|75216851|sp|Q9ZUU3|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 19/147 (12%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK- 114
+ +A++L ++ + + L + YNP+ L G T A +F +
Sbjct: 446 AYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEY-----LCNNGQTAKAEVLFRQL 500
Query: 115 ----VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
V + D +R A + + +IL+ +S P A E+L
Sbjct: 501 MKRGVQDQDALNNLIRGHAK---------EGNPDSSYEILKIMSRRGVPRESNAYELLIK 551
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPFG 197
S + G+ AKT + + +D + P
Sbjct: 552 SYMSKGEPGDAKTALDSMVEDGHVPDS 578
>gi|260446993|emb|CBG76275.1| OO_Ba0005L10-OO_Ba0081K17.26 [Oryza officinalis]
Length = 537
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 20/87 (22%)
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ +A D A+R ++ + P+ + A L
Sbjct: 55 RLLDALARDGDGDAALRVLRRMRHS----------------SPACAPTAVSYTSAMSALA 98
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPF 196
K G+ A +F+++ + +P
Sbjct: 99 ----KAGRPADAAALFDDMLANGVAPD 121
>gi|167737036|ref|ZP_02409810.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 14]
gi|167822669|ref|ZP_02454140.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 9]
gi|167917494|ref|ZP_02504585.1| tetratricopeptide repeat protein [Burkholderia pseudomallei BCC215]
Length = 602
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 366 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDPRDAAVIAR-TD 424
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
ASIL K AA+ + D +RY A Y + + L+ L
Sbjct: 425 ASILFTSKRYKEAADRLAQAVEDFPDDPDLRY----DYAMASEKIGQYTTMEQQLRLLMR 480
Query: 154 SEPSNPMHQFA 164
++P NP A
Sbjct: 481 AQPDNPQAYNA 491
>gi|163789398|ref|ZP_02183837.1| hypothetical protein CAT7_01482 [Carnobacterium sp. AT7]
gi|159875252|gb|EDP69317.1| hypothetical protein CAT7_01482 [Carnobacterium sp. AT7]
Length = 682
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Query: 7 ANSYKGKCKMGKCCYKWI-APLLILMILSLAIWFY--LFDGSHEKKKNIVGENFAQALE 62
+ + + I + +L ++ I+ Y + EK + F ALE
Sbjct: 1 MRNSTNRRDKKLPLWAIISIVVALLAVIGGGIYGYTAWAESRDEKAAQKTADTFIAALE 59
>gi|188579976|ref|YP_001923421.1| HemY domain protein [Methylobacterium populi BJ001]
gi|179343474|gb|ACB78886.1| HemY domain protein [Methylobacterium populi BJ001]
Length = 511
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 53/163 (32%), Gaps = 11/163 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A + + + + A K + L + + +L + D + AA+I
Sbjct: 231 LTAAAQRHEAGEPETATEQALKAVKLAPDLVP--AAVIAGRLLARRNDLRKAAKIIEAAW 288
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQFANEILGISALKF 175
P L + + T + + L++ + + ++ +A +
Sbjct: 289 KATPHPE-------LGKVYLNLRTGDSARDRLARAETLAK-LSSWDPESRLVIAQAASES 340
Query: 176 GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
+A+ + L D + +++ A A R+++
Sbjct: 341 KDFARAREVLAPLVDDRPTSRVCRMMARIEAAEHGADSGRSRE 383
>gi|78067598|ref|YP_370367.1| TPR repeat-containing protein [Burkholderia sp. 383]
gi|77968343|gb|ABB09723.1| TPR repeat protein [Burkholderia sp. 383]
Length = 607
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 374 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDDLPITDPRDAAVVAR-TDASI 432
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + D +RY + A T Y + K L++L ++P
Sbjct: 433 LFTAKRYPEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYTTMEKQLRELIRTQP 488
Query: 157 SNPMHQFANEILGIS-ALKFGKVQKAKTIFEE 187
NP A LG S A + ++ +A + ++
Sbjct: 489 DNP---QAYNALGYSLADRNQRLPEASKLIDK 517
>gi|332299344|ref|YP_004441265.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas
asaccharolytica DSM 20707]
gi|332176407|gb|AEE12097.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas
asaccharolytica DSM 20707]
Length = 218
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 68 KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
AR+++ +++D+ + + + L GDT A +++ ++A+D A ++
Sbjct: 37 NYSSARAAYLSSVARDSTYAP--ARLGLGDALYMSGDTVAAVQMWQRIASDSKADPRLQA 94
Query: 128 AATLQAASILVDTSSYE 144
A + +DT Y+
Sbjct: 95 LAWHNLGNRCMDTQQYD 111
>gi|22001528|sp|O82861|BCSC2_ACEXY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
gi|3298351|dbj|BAA31465.1| cellulose synthase subunit C [Gluconacetobacter xylinus]
Length = 1326
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 57/151 (37%), Gaps = 5/151 (3%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ G A ++ ++ A + ILS++ L+ M +A + +A+G+T
Sbjct: 399 RQPGQYTGATLMLADLQRSTGQVAAAEQEYRGILSREPNN--QLALMGLARVDMAQGNTA 456
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A ++ +V+ + + + L AA+ S+ + P +P
Sbjct: 457 EARQLLSRVSPQYASQVGEIEVSGLMAAASQTSDSARKVSILREAMAQAPRDPW---VRI 513
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
L + + G V +A + + + + +
Sbjct: 514 NLANALQQQGDVAEAGRVMQPILANPVTAQD 544
>gi|254383780|ref|ZP_04999128.1| serine/threonine protein kinase [Streptomyces sp. Mg1]
gi|194342673|gb|EDX23639.1| serine/threonine protein kinase [Streptomyces sp. Mg1]
Length = 529
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 59/159 (37%), Gaps = 17/159 (10%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKG 103
+ + E +A + L + A +I+ ++ L+ A+I + G
Sbjct: 339 RQDIREAYAHSEALLEEERFTQAAEVLGEIIEPAALALGSESKAVLALRRQRAAIRLLGG 398
Query: 104 DTKNAAEIFLKVANDD---LAPLAVRYAA-TLQAASILVDTSSYEEISKILQK----LSE 155
D + A F +A+ P + A QAA + + LQ +
Sbjct: 399 DYRAALPEFEALADAYARIAGPTGEQSRACRAQAARCRAELGQVTDALAALQGVLNVVRA 458
Query: 156 PSNPMHQFANEI---LGISALKFGKVQKAKTIFEELAKD 191
+ + + A E+ +G+ L G+ +A+ + E L +D
Sbjct: 459 VDSDVSEEAVELRHNIGMLLLAQGRAAEARQVLEPLHQD 497
>gi|39996877|ref|NP_952828.1| type II secretion system protein [Geobacter sulfurreducens PCA]
gi|39983765|gb|AAR35155.1| type II secretion system protein, putative [Geobacter
sulfurreducens PCA]
gi|298505890|gb|ADI84613.1| type II secretion system secretin lipoprotein PulQ [Geobacter
sulfurreducens KN400]
Length = 822
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVA-----KGDTKNAAE 110
F +A +L KLD+A F + S + + + AS A GDT +
Sbjct: 26 AFNKAEKLEEEGKLDEAVMKFAEAASTNPQQTEYRMRLLKASEKAAFEHLKNGDTAYEQQ 85
Query: 111 IFLKVANDDLAPLAVRYAATLQA 133
+ + + + +++ A +A
Sbjct: 86 LLDEALREYQSAVSL-NPALARA 107
>gi|254251383|ref|ZP_04944701.1| hypothetical protein BDAG_00568 [Burkholderia dolosa AUO158]
gi|124893992|gb|EAY67872.1| hypothetical protein BDAG_00568 [Burkholderia dolosa AUO158]
Length = 608
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 7/127 (5%)
Query: 40 YLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASIL 99
D + ++ + +A L K D+AR + + D + ++ ASIL
Sbjct: 376 QWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDNLQVTDPRDAAVIAR-TDASIL 434
Query: 100 VAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPS 157
A + D +RY + A T Y + K L++L ++P
Sbjct: 435 FTAKRYSEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYATMEKQLRELIRTQPD 490
Query: 158 NPMHQFA 164
NP A
Sbjct: 491 NPQAYNA 497
>gi|327284177|ref|XP_003226815.1| PREDICTED: tetratricopeptide repeat protein 30B-like [Anolis
carolinensis]
Length = 682
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 10/150 (6%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
GE A L + + +A L + + LS + + D AAE
Sbjct: 16 ADGEYTAAIYGLIRAGQFAEAVGLLSTELQRSCRSRAGLSLLGYCYFQLQ--DFAAAAEC 73
Query: 112 FLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNP--MHQFANEI 167
+ ++ R L A L Y E + L + P+ P + A +
Sbjct: 74 YEQLCALHPELPEYR----LFQAQALYKAGLYAEALRATGPLLGATPAAPPALQGKALRL 129
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFG 197
+ G + AK + E ++ G
Sbjct: 130 QAAAHYAQGDLSSAKALVELTLSSASTESG 159
>gi|258592799|emb|CBE69108.1| exported protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 249
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 9/131 (6%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
D A ++F + L L +++ + ++ + +G T +A F A
Sbjct: 106 AFVQQADYDQAVTAFRQALLNPAYLSPEQAHLNLGNVYMVQGRTADAVMEF------KRA 159
Query: 122 PLAVRYAATL--QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ 179
+ A + + E L L+ P A + LG + L +
Sbjct: 160 LDILPDFAEAHNRLGYAYLVQGQLELAIAELT-LAVKQAPELATAYQSLGFTYLSANEKD 218
Query: 180 KAKTIFEELAK 190
+A+ F+++
Sbjct: 219 RARQAFQKVVD 229
>gi|86157481|ref|YP_464266.1| glutamate-ammonia-ligase adenylyltransferase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85773992|gb|ABC80829.1| Glutamate-ammonia-ligase adenylyltransferase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 1014
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 15/134 (11%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNP---LSNM------- 93
G +G QA E S + F +L L+ +
Sbjct: 446 GERTGLARAMGYASEQAFEAVLSEHRERVARHFAGLLGTGAGAAPLDPELALLADADVPA 505
Query: 94 -YIASILVAKG--DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL 150
A+I +G D A +A + A A S+L D + + L
Sbjct: 506 DRRAAIATRRGLADPDRAIAAIDSMARRRTPFSQLGDPAA--AVSLLADALGTPDPDQAL 563
Query: 151 QKLSEPSNPMHQFA 164
L++ + + A
Sbjct: 564 SHLADFAAALRNPA 577
>gi|84494565|ref|ZP_00993684.1| HDIG domain protein [Janibacter sp. HTCC2649]
gi|84384058|gb|EAP99938.1| HDIG domain protein [Janibacter sp. HTCC2649]
Length = 415
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSN--KLDDARSSFEKI 79
+A L+ L L+ A+W L G + A+E S +
Sbjct: 213 GPVAVLVALAPLAGALWALLQYGEERDARERALGALVTAIETRAPALEGHSGRVSDLAAL 272
Query: 80 LSQDNK-LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
++QD ++++ A +L G A +V D+ A+R AA LQ+
Sbjct: 273 MAQDLGLGPKEVADVRTAGLLHDLGRVVVAP---GQVGADEADSAALRGAAMLQS 324
>gi|332705486|ref|ZP_08425564.1| hypothetical protein LYNGBM3L_07980 [Lyngbya majuscula 3L]
gi|332355846|gb|EGJ35308.1| hypothetical protein LYNGBM3L_07980 [Lyngbya majuscula 3L]
Length = 810
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 61/163 (37%), Gaps = 14/163 (8%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
+ + +A L ++++A FE+ + + + + + + +A +G
Sbjct: 72 EAAQAQTIPVPIIRAFNLLREGRVEEAIKEFEQAVQRYPQSID--AKIGLAIAYRRQGLI 129
Query: 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE--ISKILQKLSE--PSNPMH 161
A + + +V D L A +L +Y++ ++ ++ L+ NP
Sbjct: 130 DQAWDAYQQVLAQDPTNEL-----ALSAVGLL---GTYKQEWQTQGIEALTVLLDINPND 181
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
A + + +A +E + + + SP + +++
Sbjct: 182 TEARGRRALLYGYQQRFGEAIADYEIVLQTDPSPDVLIGAAEV 224
>gi|329962147|ref|ZP_08300158.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328530795|gb|EGF57653.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 257
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 12/161 (7%)
Query: 38 WFYLFDGSHEKKKNIV---GENFAQALELFNSNKLDD-ARSSFEKILSQDNKL-YNPLSN 92
+ +L+ E+K G+ + +A + D + F KI + L+
Sbjct: 78 YKHLYADPREEKAQAALFKGQEYFEADAYAEALNGDSIGFAGFAKIADDYSGTKAANLAK 137
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDL--APLAVRYAATLQAASILVDTSSYEEISKIL 150
Y+ G A + DD AP A +D ++ +
Sbjct: 138 AYMGICYAHLGKYDEAVKALDSFDADDQMVAPSIKGAMGNCYAQLGQLDKAASMLLKAAN 197
Query: 151 QKLSEPSNP-MHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ + +P A EIL +K GK A + +
Sbjct: 198 EADNNTLSPIFLLQAGEIL----VKQGKYDDAIQAYTSIKD 234
>gi|228471013|ref|ZP_04055857.1| BatC protein [Porphyromonas uenonis 60-3]
gi|228307233|gb|EEK16256.1| BatC protein [Porphyromonas uenonis 60-3]
Length = 220
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
AR ++ +++D+ + + + L GDT A +++ ++ +D A
Sbjct: 35 QRGNYSSARKAYLSSVARDSVYAP--ARLGLGDALYMSGDTVAAVQMWQRIVSDSKADPR 92
Query: 125 VRYAATLQAASILVDTSSYE 144
++ A + +DT Y+
Sbjct: 93 LQALAWHNLGNRCMDTRQYD 112
>gi|221199988|ref|ZP_03573031.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2M]
gi|221206857|ref|ZP_03579869.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2]
gi|221211196|ref|ZP_03584175.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD1]
gi|221168557|gb|EEE01025.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD1]
gi|221173512|gb|EEE05947.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2]
gi|221180227|gb|EEE12631.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2M]
Length = 607
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 374 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDDLPVTDPRDAAVIAR-TDASI 432
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + +D +RY + A T Y + K L++L ++P
Sbjct: 433 LFTAKRYAEAEARLSRAVDDFPDDPDLRYDYAMAAEK----TGHYAAMEKQLRELIRTQP 488
Query: 157 SNPMHQFA 164
NP A
Sbjct: 489 DNPQAYNA 496
>gi|149190260|ref|ZP_01868534.1| Putative Zn-dependent protease [Vibrio shilonii AK1]
gi|148835867|gb|EDL52830.1| Putative Zn-dependent protease [Vibrio shilonii AK1]
Length = 483
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 41 LFDGSHEKKKNIVGENFA--QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
F+ + K + ++F +AL ++NKLD+A + +K+L +D L + +
Sbjct: 292 WFERTARKAGPKIQDSFEYGKALVYLDTNKLDEAEAILDKLLKKDPNNNFYLDA--ASDL 349
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS---- 154
+A+ + AAE+ +V + T+ A+ L+ Y++ ++LQ+ +
Sbjct: 350 YIAQKRPEKAAELMKEVLTVKPNNPVI----TINYANALLKGEKYKDSIQVLQRYTHEHP 405
Query: 155 EPSNPMHQFANEILGISALKFGKVQK 180
+N H +L + +K G +
Sbjct: 406 NDTNGWH-----LLSEANIKLGNSAE 426
>gi|161523696|ref|YP_001578708.1| TPR repeat-containing protein [Burkholderia multivorans ATCC 17616]
gi|189351540|ref|YP_001947168.1| hypothetical protein BMULJ_02743 [Burkholderia multivorans ATCC
17616]
gi|160341125|gb|ABX14211.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia multivorans
ATCC 17616]
gi|189335562|dbj|BAG44632.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 607
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 374 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDDLPVTDPRDAAVIAR-TDASI 432
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + +D +RY + A T Y + K L++L ++P
Sbjct: 433 LFTAKRYAEAEARLSRAVDDFPDDPDLRYDYAMAAEK----TGHYAAMEKQLRELIRTQP 488
Query: 157 SNPMHQFA 164
NP A
Sbjct: 489 DNPQAYNA 496
>gi|148264413|ref|YP_001231119.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146397913|gb|ABQ26546.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 860
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 57/155 (36%), Gaps = 11/155 (7%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAP 122
+ A +FE+ +S+ + ++L A G+ + A + + + +
Sbjct: 708 AKKGDNNSAMKAFEEAVSKKPDFAP--AYFAQGALLDAAGNKREAIKKYREALEKSEDFV 765
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
A+ A + D ++ + L + + + + LG LK G+ +A
Sbjct: 766 PALNNLA-----YLYADGYGSKQDAVRLAVTAFKLDSGNPAIMDTLGYVLLKNGRNAEAL 820
Query: 183 TIFEELAKDNNSPFGISTRSQMILANIIASDQRNK 217
+ E A+ + + +LA A+ ++K
Sbjct: 821 KLLERAARLLPADANVRNH---LLAAFKANGDQSK 852
>gi|297157220|gb|ADI06932.1| serine/threonine protein kinase [Streptomyces bingchenggensis
BCW-1]
Length = 538
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 59/159 (37%), Gaps = 17/159 (10%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKG 103
++ + + +A++ +L + A + ++ L A++L+A
Sbjct: 349 RDAIRDAYARSADLAERGRFVQAADVLKAAIATAATALGQHNPRVLGLRGQRAAVLMAGE 408
Query: 104 DTKNAAEIFLKVAN---------DDLAPLAVRYAATLQAASILVDTS--SYEEISKILQK 152
D + A F +A D A R+AA +A + ++E+ +++
Sbjct: 409 DFRRALPEFDALAAVYARTEGPSSDSALECRRHAAHCRANLGQATAALREFQEVLEVVSD 468
Query: 153 LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
++ +G+ G+ +A+ + + L +D
Sbjct: 469 TDGDASETALDLRRSIGVLLFSEGRRTEAEGVLDALHED 507
>gi|15599893|ref|NP_253387.1| hypothetical protein PA4699 [Pseudomonas aeruginosa PAO1]
gi|107103798|ref|ZP_01367716.1| hypothetical protein PaerPA_01004869 [Pseudomonas aeruginosa PACS2]
gi|116052845|ref|YP_793162.1| hypothetical protein PA14_62190 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296391523|ref|ZP_06880998.1| hypothetical protein PaerPAb_25373 [Pseudomonas aeruginosa PAb1]
gi|313109675|ref|ZP_07795617.1| hypothetical protein PA39016_002020009 [Pseudomonas aeruginosa
39016]
gi|9950957|gb|AAG08085.1|AE004884_3 hypothetical protein PA4699 [Pseudomonas aeruginosa PAO1]
gi|115588066|gb|ABJ14081.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|310882119|gb|EFQ40713.1| hypothetical protein PA39016_002020009 [Pseudomonas aeruginosa
39016]
Length = 259
Score = 35.3 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 72 ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAAT 130
A S + + + L+ + A GD +AA + P + A
Sbjct: 140 ASGSAGSLAADEQLDGPVLAMLTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQ 199
Query: 131 LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ A D + E++++ + + E++ + K G A
Sbjct: 200 VRLA--QGDAAQAEQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGA 248
>gi|330991175|ref|ZP_08315128.1| hypothetical protein SXCC_01082 [Gluconacetobacter sp. SXCC-1]
gi|329761761|gb|EGG78252.1| hypothetical protein SXCC_01082 [Gluconacetobacter sp. SXCC-1]
Length = 445
Score = 35.3 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 62/208 (29%), Gaps = 17/208 (8%)
Query: 16 MGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSS 75
G+ + L + +L + ++ VG +A + K A +
Sbjct: 40 RGRLLAGVMMALPVAGVLPAHGA-----HAADQLGEKVGVALQKAQTELAAKKYPQAMAD 94
Query: 76 FEKIL----SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATL 131
+ D + Y ++ M A++ G+ A + + P A + L
Sbjct: 95 VDAADAVSGKSDFESY-TIAQMR-AAVAAQSGNVPAAIAAYDTLIASPRTPAATKEQMAL 152
Query: 132 QAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEILGISALKFGKVQ-KAKTIFEEL 188
S+ Y + +K + NP IL + A+ ++
Sbjct: 153 AEGSMAFTAKDYPTAVAVTEKYIKAGGKNPQMLT---ILIQAYYLQHDYANAARVQQAQI 209
Query: 189 AKDNNSPFGISTRSQMILANIIASDQRN 216
+ + ++LA A + N
Sbjct: 210 DATLKAGAKPAENQLLLLATCQAQLKDN 237
>gi|283781318|ref|YP_003372073.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
gi|283439771|gb|ADB18213.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
Length = 829
Score = 35.3 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA-PLAV 125
K +A ++F K L + +N + +L A+G + AE + A+
Sbjct: 545 GKKREAETAFRKSLEILPTFVD--ANHTLGHLLAAEGKVSDGAEFLERAVKIHPLHEGAL 602
Query: 126 RYAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
+ A A L+D T E + L K+ NP H+ A + + + G++ +A
Sbjct: 603 QDLAV---AYDLLDRTEESEATFRRLLKV----NPQHRVARDSYALLLQRLGRLDEAVAQ 655
Query: 185 FEELAKDNNSPFGISTRSQMILA 207
+E L + P + R + +A
Sbjct: 656 YEYLVE--QDPGDVGPRMNLAIA 676
>gi|255533187|ref|YP_003093559.1| hypothetical protein Phep_3303 [Pedobacter heparinus DSM 2366]
gi|255346171|gb|ACU05497.1| hypothetical protein Phep_3303 [Pedobacter heparinus DSM 2366]
Length = 251
Score = 35.3 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 42/192 (21%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
KWI+ IL++ +++ + G ++ + +
Sbjct: 97 KWISVAAILIV-----GLFVWAPWNTDLYERYG--ISKEMSVVERG-------------- 135
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS----IL 137
NK N+ A+ L GD A +I K + A A L
Sbjct: 136 DGNKN-----NIEKAADLYNAGDFDAAGKILEK--------EYLADTANSLVAYYYGITL 182
Query: 138 VDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
++T+ +E +IL L + A +G+S LK +A E++ +
Sbjct: 183 IETNKADEARRILIGLYAGKSVFKYEAAYYIGLSYLKQNNHAQALEWLEKIPQ----GSP 238
Query: 198 ISTRSQMILANI 209
+ ++Q ++ I
Sbjct: 239 VYEKAQELIKKI 250
>gi|220906973|ref|YP_002482284.1| serine/threonine protein kinase [Cyanothece sp. PCC 7425]
gi|219863584|gb|ACL43923.1| serine/threonine protein kinase [Cyanothece sp. PCC 7425]
Length = 760
Score = 35.3 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 27/92 (29%), Gaps = 6/92 (6%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL-ELFNSNKLDDARSSFEKILSQD 83
+ +++L+ + + ++ KN E A+ + ++ D +
Sbjct: 489 GVGVAVVLLTAGGGYGWWQWQEQRTKNENAEQLLAAMVAFHDQSQFADCIKKGSDVPVDT 548
Query: 84 ---NKLYNPL--SNMYIASILVAKGDTKNAAE 110
N L + A L G A
Sbjct: 549 TAYNDAQRVLNQCRLGGAKQLAGTGKLAEAIA 580
>gi|167814145|ref|ZP_02445825.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 91]
gi|167844241|ref|ZP_02469749.1| tetratricopeptide repeat protein [Burkholderia pseudomallei B7210]
gi|254196773|ref|ZP_04903197.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|169653516|gb|EDS86209.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
Length = 602
Score = 35.3 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 36 AIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYI 95
A+ D E + V +A L K D+AR + + D + ++
Sbjct: 366 ALAAQWLDKVDEASQQYVPAQVTRAQLLQKQGKADEARKLLANLQASDPRDAAVIAR-TD 424
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL-- 153
ASIL K AA+ + D +RY A Y + + L+ L
Sbjct: 425 ASILFTSKRYKEAADRLAQAVEDFPDDPDLRY----DYAMASEKIGQYTTMEQQLRLLMR 480
Query: 154 SEPSNPMHQFA 164
++P NP A
Sbjct: 481 AQPDNPQAYNA 491
>gi|327189704|gb|EGE56851.1| hypothetical protein RHECNPAF_560019 [Rhizobium etli CNPAF512]
Length = 224
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 12/113 (10%)
Query: 19 CCYKWIAPLLILMILSLAIW--FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSF 76
C W +L +L + L K E L N + +A F
Sbjct: 57 CNVAWGIIDAVLFVLGTTFYKSRRLRLFRQIKAAGNESEALTV---LANEFPIKEAP--F 111
Query: 77 EKILSQDNKLYNPLSNM-YIAS---ILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ + LY L + A + ++KGD A +FL V+ P +
Sbjct: 112 SAKAADTDALYRSLLTLTRRADPVKVSLSKGDLSAAIAVFLLVSA-TAIPAVL 163
>gi|308803138|ref|XP_003078882.1| RNA polymerase III transcription factor TFIIIC (ISS) [Ostreococcus
tauri]
gi|116057335|emb|CAL51762.1| RNA polymerase III transcription factor TFIIIC (ISS) [Ostreococcus
tauri]
Length = 828
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ A N NK + A + D + Y M A++ GDTK A E V
Sbjct: 204 YRMATLAVNVNKKEYALHCLARAARSDPRNYEN--KMDQATLYSELGDTKKAIEQLEWVL 261
Query: 117 NDDLAP---LAVRYAATLQAASILVDTSSYEEISKILQKL 153
DDL P +R AT+ A + S E+ L++L
Sbjct: 262 RDDLPPLDGAILRD-ATVFLAKLYYGAESREKAEYALERL 300
>gi|115380381|ref|ZP_01467379.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310822651|ref|YP_003955009.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|115362616|gb|EAU61853.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309395723|gb|ADO73182.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 622
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 9/141 (6%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A + D+A E + + + + +A L +GD A + +
Sbjct: 159 LILAQSYLETRDPDEAVKVVEALAAALPGESSGYRRLGLA--LAERGDRSRAERLLARAT 216
Query: 117 N-DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKF 175
D A A L A + + E +S+ L++ ++ + + ALK
Sbjct: 217 ERDPGDVEAWVTLARLYEAGGRLSHAE-EALSRSLERDADNRDVLLSAGR-----LALKL 270
Query: 176 GKVQKAKTIFEELAKDNNSPF 196
G +A+ F+ L +N P
Sbjct: 271 GSATRARAYFDRLLSLSNDPE 291
>gi|87201047|ref|YP_498304.1| sulfotransferase [Novosphingobium aromaticivorans DSM 12444]
gi|87136728|gb|ABD27470.1| sulfotransferase [Novosphingobium aromaticivorans DSM 12444]
Length = 677
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 52/155 (33%), Gaps = 35/155 (22%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNM-YIASILVAKGDTKNAAEIFLKV 115
F A L + +A + + + ++ L + +A+ L + A + +++
Sbjct: 48 FLAARALRRMGRQREALDRLDALAKANPRVPAVLYELGQVAADLGDQRRATAALQALVRL 107
Query: 116 --------------------------ANDDLAPLAVRYAATLQAASILVDTSSYEE---I 146
A+ + R L+AA+ + D + +
Sbjct: 108 QPAIASGWFLLARQLRKAGQEEDAWRADLSGIHASSRDGELLKAAAAMNDGETDAAEALL 167
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
+ L++ ++ + + +LG A + G + A
Sbjct: 168 NARLERQADDAPALR-----LLGEIAWRRGDMTTA 197
>gi|42523504|ref|NP_968884.1| hypothetical protein Bd2030 [Bdellovibrio bacteriovorus HD100]
gi|39575710|emb|CAE79877.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 268
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 7/81 (8%)
Query: 58 AQALELFNS----NKLDDARSSFEKILSQDNKL--YNPLSNMYIASILVAKGDTKNAAEI 111
AL L K D+A + K+ L M +I KGD K A E
Sbjct: 138 MAALNLSEIYLTYKKNDEASAVLAKVEPGLKSGDVLTALVLMQTGNIQADKGDCKAAVEK 197
Query: 112 FLKVANDDLAPLAVRYAATLQ 132
+ K+A D A A L+
Sbjct: 198 WQKLA-DTKALAFAHDEAKLR 217
>gi|116751468|ref|YP_848155.1| sporulation domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116700532|gb|ABK19720.1| Sporulation domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 538
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 54/153 (35%), Gaps = 8/153 (5%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+ D A+++F+K+L+ + + + KGD + A + + + A
Sbjct: 117 GQYDQAQAAFQKVLASPFYETPQFARYNLGLVYEKKGDQQAALQQYQEAAR----LQPTH 172
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
+ + A IL E K ++ +P A+ GI G A F
Sbjct: 173 ALSHHRTAMILEAQGRAGEAQKEFA-MALQYSPDLAEAHMHYGILCFGTGDFDTAVHSFA 231
Query: 187 ELAKDNNSPFGI-STRSQMILANIIASDQRNKK 218
+ + P + + ++ L I A+ +
Sbjct: 232 RVIR--LMPNTVEADEARKYLDRIAAAQDAASR 262
>gi|116623172|ref|YP_825328.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226334|gb|ABJ85043.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 786
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 13/115 (11%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGEN---FAQALELFNSNKLDDARSSFEKILS 81
A + +I+S + D K GE + A L S A ++ + +S
Sbjct: 677 AAFNLAVIVSGSRANEAIDLCRRAVKAAPGEPKYVYTLAFYLAQSGDTPGAAAALRRAIS 736
Query: 82 QDNKL---YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
Y L I + +G + A + + A D P R A+ A
Sbjct: 737 AGVANTQCYRALMR-----IYLQQGQPREALALSRQAAADPALPE--RDRASFLA 784
>gi|323166987|gb|EFZ52726.1| cellulose synthase operon C domain protein [Shigella sonnei 53G]
Length = 582
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 41/152 (26%), Gaps = 11/152 (7%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
A L S K +A + + ++ +A + D A + V
Sbjct: 2 LETANRLRESGKEAEAEAMLRQ----QPPSTRI--DLTLADWAQQRRDYTAARAAYQNVL 55
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFG 176
+ A A L + + L KL N + ++ + G
Sbjct: 56 TREPANAD----AILGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRR-VALAQAQLG 110
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQMILAN 208
A+ F +L S + ++
Sbjct: 111 DTAAAQRTFNKLIPQAKSQPPSMESAMVLRDG 142
>gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293]
gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 820
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+ L + KL++A F ++ +N+ ++L +G + A + K
Sbjct: 215 VALQKAGKLEEAERMFRDLVRIAPGSVKGNNNL--GTVLAEQGKAEEAERCYRKAL---S 269
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEP 156
A L +S+ +T S EE K +Q L+
Sbjct: 270 LDAGYGK-AALNLSSLKRETESPEEALKSIQALAAE 304
>gi|198284550|ref|YP_002220871.1| thioredoxin [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666652|ref|YP_002427218.1| thioredoxin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249071|gb|ACH84664.1| thioredoxin [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518865|gb|ACK79451.1| thioredoxin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 289
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
QAL+ K +A++ E+ +S + + +A + + +G +A ++
Sbjct: 121 VQALDAIAQGKAAEAQALLEQAISIHPGNDP--ARLALAHLAIQQGRHADAQAQIDAMS 177
>gi|188994328|ref|YP_001928580.1| hypothetical protein PGN_0464 [Porphyromonas gingivalis ATCC 33277]
gi|188594008|dbj|BAG32983.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 995
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
A ++D+A + ++ ++ + ++ YIA I + +GD + AAEI ++
Sbjct: 179 RLLLAAIQIEDGRIDEAEQTLSRLK--NHPQFADEADAYIAEIQLLRGDYREAAEIADRL 236
Query: 116 ANDDLA----PLAVRYAATLQAASILVDTSS----YEEISKILQKLSEPSNPMHQFANEI 167
+ + + P +R A A L D++ + S+ + P++
Sbjct: 237 LSRNSSMRQRPQLLRVAGN--AYYRLGDSNKTIDYLSDYSEKVGDRIAPADAY------A 288
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNS 194
LG++ K G +++A D S
Sbjct: 289 LGVTYYKQGLMKEALRPLAAATTDAGS 315
>gi|171059905|ref|YP_001792254.1| hypothetical protein Lcho_3231 [Leptothrix cholodnii SP-6]
gi|170777350|gb|ACB35489.1| conserved hypothetical protein [Leptothrix cholodnii SP-6]
Length = 406
Score = 35.3 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 8/152 (5%)
Query: 16 MGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSS 75
M W A LL L + + + E + +G++ A EL + K +A +
Sbjct: 1 MKTHTRAWFAALL-LGVAAGYAPAQTPAPAQESVRAEIGKSLQGAQELMKAGKFREALAK 59
Query: 76 F-EKILSQDNKLY-NPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQA 133
E + + Y + + S GD A+ F A L+A
Sbjct: 60 VREADAAPNPTAYERFILDRMRGSAAAGAGDEVVASRSFEAALASGRL-QPAEALAILEA 118
Query: 134 ----ASILVDTSSYEEISKILQKLSEPSNPMH 161
A D + E+++ K S PM
Sbjct: 119 LASSAYRTKDYAKAIEVAQRYFKEGGKSEPMR 150
>gi|330995614|ref|ZP_08319514.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
11841]
gi|329575020|gb|EGG56573.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
11841]
Length = 1114
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 48/151 (31%), Gaps = 22/151 (14%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
AL+ + D+A + E + ++Y + + + KGDT A E + K
Sbjct: 684 IEYALDFAQAGLYDEAINLLEGYAATQGEVYPMV-HYALGYCHSRKGDTVKALEYYKKAE 742
Query: 117 NDDLA---PLAVRYA------------ATLQAASILVD----TSSYEEISKILQKLSEPS 157
DD + P + A +AA L + Y+ + +
Sbjct: 743 QDDHSYCFPNRIEEVLVLQDAMKENHEACAKAAYALGNFWYAARQYDNAITCWEASAAID 802
Query: 158 NPMHQFANEILGISAL-KFGKVQKAKTIFEE 187
L ++ K QKA E+
Sbjct: 803 PAFPTVWRN-LSLAYYNKRNNPQKAVETLEK 832
>gi|328951923|ref|YP_004369257.1| FecR protein [Desulfobacca acetoxidans DSM 11109]
gi|328452247|gb|AEB08076.1| FecR protein [Desulfobacca acetoxidans DSM 11109]
Length = 1207
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 27/173 (15%)
Query: 39 FYLFDGSHEKKKNIVGENFAQ-------ALELF-----NSNKLDDARSSFEKILSQDNKL 86
+ +D + + E+ Q AL L +++ +A + FEK+ S D +
Sbjct: 269 WAAYDQGRLSEAQQLAEHVLQQVPEQPLALTLLGWINLQNHRPQEAAALFEKVSSPDWRC 328
Query: 87 --YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYE 144
L+ +GD A ++F + L P A + + +
Sbjct: 329 LIGQSLARYR-------RGDPVGAYKLFDQ-GRRGLPPSPF--LAVM-SGYFTLMVGKAS 377
Query: 145 EISKILQKLSE-PSNPMHQFANEILGISALKFGKVQKA-KTIFEELAKDNNSP 195
E + L ++ P +P A +L + + A + LA+ SP
Sbjct: 378 EAQRELAAVANLPPSPAVVLARSLLAQIHIVQNRKDAALAEACQALAQAPGSP 430
>gi|302838913|ref|XP_002951014.1| hypothetical protein VOLCADRAFT_117762 [Volvox carteri f.
nagariensis]
gi|300263709|gb|EFJ47908.1| hypothetical protein VOLCADRAFT_117762 [Volvox carteri f.
nagariensis]
Length = 529
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN---KLYNPLSNMYIASILVAKGD 104
+++ + + + ++LF++ +L + FEK+L+ K Y L+ + A +L + G
Sbjct: 367 EEEQRAAQLYEEGMQLFSAGQLKASYDKFEKVLAAVPVKTKQYGGLATLQKAIVLDSVGQ 426
Query: 105 TKNAAEIFLKVAN 117
++ A +++ +AN
Sbjct: 427 SEAAQKLYKSIAN 439
>gi|289192263|ref|YP_003458204.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938713|gb|ADC69468.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 310
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
L++ KL +A FEK L + K Y LS +Y IL G + A E F K+
Sbjct: 153 LYSEGKLKEALECFEKALEVNPKDY--LSLLYKGEILFELGKFREALECFEKI 203
>gi|307154088|ref|YP_003889472.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Cyanothece sp. PCC 7822]
gi|306984316|gb|ADN16197.1| PBS lyase HEAT domain protein repeat-containing protein [Cyanothece
sp. PCC 7822]
Length = 1244
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
A+ ++ K A E + D+ AA LV+ + I ++ L
Sbjct: 650 RAAAEILGKIGNHTAIEPLINALKDED------DLVRSAAAEALVEIGNPTAIEPLINAL 703
Query: 154 SEPSNPMHQFANEILG 169
++ + + A EILG
Sbjct: 704 TDEDDLVRHAAAEILG 719
>gi|157374762|ref|YP_001473362.1| TPR repeat-containing protein [Shewanella sediminis HAW-EB3]
gi|157317136|gb|ABV36234.1| tetratricopeptide TPR_2 repeat protein [Shewanella sediminis
HAW-EB3]
Length = 644
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 11/86 (12%)
Query: 39 FYLFDGSHEKKKNIVGENFA----QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY 94
+ ++ E F+ QA + + D+A + FE+ LYN
Sbjct: 351 QQGMEAYQAQEYQGASEKFSDPQWQASAHYKAGDYDEALALFEQ-DESAAGLYN------ 403
Query: 95 IASILVAKGDTKNAAEIFLKVANDDL 120
+ L+ +G A + + + +
Sbjct: 404 QGNALMQQGKYDEAIKRYERAVKKNP 429
>gi|154249690|ref|YP_001410515.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1]
gi|154153626|gb|ABS60858.1| Tetratricopeptide TPR_2 repeat protein [Fervidobacterium nodosum
Rt17-B1]
Length = 359
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND---DLAPL 123
KL+ A EK + ++ +A + KG+ + A + + + + P
Sbjct: 214 GKLEKAIEILEKYREESENSI--IALYELAELYRKKGNEEKA-KEYESLIMEIDPQKDPN 270
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ A + + +Y+++ +++ + +NP + N +L ++ +K +++KA+
Sbjct: 271 GIEIWAKVH-----LKKGNYDKVISVIEN-AIKANPEAKHLNLVLAVAYVKTNQIEKARR 324
Query: 184 IFEELAKDN 192
+ EEL DN
Sbjct: 325 VVEELKDDN 333
>gi|73541772|ref|YP_296292.1| hypothetical protein Reut_A2084 [Ralstonia eutropha JMP134]
gi|72119185|gb|AAZ61448.1| conserved hypothetical transmembrane protein [Ralstonia eutropha
JMP134]
Length = 210
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 59/167 (35%), Gaps = 9/167 (5%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-DNKLYNPLSNMYI 95
W Y K+ + + Q ++ + + + + + Y P+S +
Sbjct: 41 GWKYWE----RKQASEAAVLYDQVMKAAEGRDAERVKRAAGDLEDKFGRTAYGPMSALVA 96
Query: 96 ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKIL--QKL 153
A +L GD A + L+ A D + A ++ A +L+D +Y++ +L +
Sbjct: 97 AKVLYDAGDLAGA-KTQLQWAMDHGDGE-YSHIARVRLAGVLLDEKAYDQGLALLKDEPP 154
Query: 154 SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGIST 200
+ ++L + + ++L D+ S I
Sbjct: 155 AAFVAIYADRRGDLLAAQDKRADARAAYRKALDKLGADDQSMRQIIQ 201
>gi|289548649|ref|YP_003473637.1| hypothetical protein Thal_0878 [Thermocrinis albus DSM 14484]
gi|289182266|gb|ADC89510.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
14484]
Length = 850
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 56/162 (34%), Gaps = 23/162 (14%)
Query: 37 IWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIA 96
W ++ + + + +AL FN + ++ EK + + A
Sbjct: 415 GWDLFRQRRWKESLQYLDDPYYRALAYFNMKNYKEVITTLEKDD-------RLQARLLKA 467
Query: 97 SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE- 155
+ G+ A P R L + + E+ +K ++ S
Sbjct: 468 EAYLLLGNPAKARSYLT--------PQTDRELYLLGLSYFM-----EEDYNKAVEFFSRV 514
Query: 156 -PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD-NNSP 195
S+P+ A +G + G + KA+ + ++ ++ ++P
Sbjct: 515 PESSPLRPQALLKMGDAFYNMGDLSKAQETYRKVIEEYPDTP 556
>gi|58582955|ref|YP_201971.1| thioredoxin [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58427549|gb|AAW76586.1| thioredoxin [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 326
Score = 35.3 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 103 GDTKNAAEIFLKV-ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
GDT A ++ + AN AVR A L A++L D + + +N
Sbjct: 204 GDTAEAEQLIDALPANLATDDRAVRAKARLSFANVLKDAPDAGTLQA-----TVDANGAD 258
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
A +LG+ L G + A F E+ + + + R
Sbjct: 259 LRARHLLGVRHLLDGNDEAALEQFLEMLRQDRTFDDNRPR 298
>gi|251793373|ref|YP_003008101.1| PgaA [Aggregatibacter aphrophilus NJ8700]
gi|247534768|gb|ACS98014.1| PgaA [Aggregatibacter aphrophilus NJ8700]
Length = 808
Score = 35.3 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 19/174 (10%)
Query: 44 GSHEKKKNIVGENFAQALELF--NSNKLDDARSSFEKILSQDNKL-YNPLSN-------- 92
+ +KK + + + L ++ K A+ EK+ Y S
Sbjct: 342 QQNTEKKQPISDGLFLKMSLAASDAGKFALAQQYLEKVKDAPYVNDYTRTSRVVNPSYDE 401
Query: 93 --MYIASILVAKGDTKNAAEIFLKVAND--DLAPLAVRYAATLQAASILVDTSSYEEISK 148
+A + + +G+ + A + A D P + A L+ + D +I
Sbjct: 402 RYFGLARLALWRGNPRLAQALVDARALDKTPGDPWVLLQKADLERSRNNFDD---AKIWA 458
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTR 201
++ P + +F L +AL+ + A + E++ + + R
Sbjct: 459 HKAEVFFPGDEDKKFVRYSLIETALRQNDLPTATRLINEMSDKEKEDAQSLIER 512
>gi|225010576|ref|ZP_03701047.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
MS024-3C]
gi|225005405|gb|EEG43356.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
MS024-3C]
Length = 1001
Score = 35.3 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 16/178 (8%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY-IA 96
W F+ E + ++ + + Q S + S FE+ L N LS Y +A
Sbjct: 707 WVGQFNLPQESEASLEKQTYDQLNRTLGSLSQAEQISKFEQYLKDFPNGANALSISYNLA 766
Query: 97 SILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS-------SYEEISKI 149
+ A ++ VA A ++ + ++ +++
Sbjct: 767 LLYTETAQDSKAFPLYDIVAKAQSIHAEAALVAYIK---LQLENGLGENPETPLKQLLSR 823
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
Q + + + + + ++ A T +E+ P I +Q+ LA
Sbjct: 824 SQDPANKAYALSNLMR-----LSYEDQSLEAALTYAQEVMALAEVPEEIKQDAQITLA 876
>gi|158298847|ref|XP_319000.3| AGAP009880-PA [Anopheles gambiae str. PEST]
gi|157014083|gb|EAA14469.3| AGAP009880-PA [Anopheles gambiae str. PEST]
Length = 625
Score = 35.3 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 3 SNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQAL- 61
+N SY+ ++ K ++ L + ++ L+ ++ AL
Sbjct: 361 TNAAIQSYRQAVEVNKRDFRAWYGLGQAYEILKMTFYSLYYYKAAQQLRPYDSRMLVALG 420
Query: 62 ELFNS-NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
E + NK+ DA ++K + + ++ +A + +G+T+ A FLK +D+
Sbjct: 421 ETYEKLNKVADALKCYQK--AYNVGDIEGVALYSMAKLYEKQGETEKAIPAFLKFCSDEK 478
Query: 121 APLAVRYAATLQAASILV 138
+ A+L A + +
Sbjct: 479 L---IADKASLCHAYMTL 493
>gi|110598409|ref|ZP_01386681.1| ATPase, E1-E2 type [Chlorobium ferrooxidans DSM 13031]
gi|110339943|gb|EAT58446.1| ATPase, E1-E2 type [Chlorobium ferrooxidans DSM 13031]
Length = 855
Score = 35.3 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 39/114 (34%), Gaps = 20/114 (17%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F AL L+ K + A + + S + + IA V KGD L V
Sbjct: 79 FVMALTLYQERKTEHALEVLKDLSSPRASVIRDRAQRRIAGREVVKGD-------LLVVG 131
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
D P A L A +++VD L+ S P+ + E +
Sbjct: 132 EGDRVPA---DAQLLSALNLMVDE----------SLLTGESVPVRKSDEESAAV 172
>gi|239993639|ref|ZP_04714163.1| serine/threonine-protein kinase PksC [Alteromonas macleodii ATCC
27126]
Length = 1052
Score = 35.3 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 4/143 (2%)
Query: 72 ARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIF-LKVANDDLAPLAVRYAAT 130
A+ S + ++SQ L +M A I G+ A + +A A
Sbjct: 540 AQQSIDALVSQ-FPDRPDLLSMR-ADIYQWAGEDAKAMSDYKAALALRPNNGQLWFELAR 597
Query: 131 LQAASILVDTSSYEEISKILQKLSEPSNPMHQF-ANEILGISALKFGKVQKAKTIFEELA 189
LQ + ++T++ + +++ L + +P + GI+ L+ A F++
Sbjct: 598 LQIINGDIETATSDSLTRALVAFRQAKDPRGESLVLNAFGIAYLRTADNVAAAQYFKDAL 657
Query: 190 KDNNSPFGISTRSQMILANIIAS 212
++ S R++ + IA+
Sbjct: 658 ALRDAKTQPSQRAKTLANLAIAT 680
>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
Length = 1179
Score = 35.3 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L L N K +DA +S++K + + Y +A L G ++A + K +
Sbjct: 184 LALNNLGKYEDAIASYDKAIEINPNNYKAWGKRGLA--LNNLGKYEDAIASYDKAIEINP 241
Query: 121 APL---AVRYAATLQAASILVDTSS-YEEISKIL-QKLSEPSNPMHQFANEILGISALKF 175
+R A +D YEE+ L Q L S+ + + +G+ K
Sbjct: 242 GEYGSWILRSFA--------LDKLEKYEEVVTSLDQALKINSHEYYAWNRRAIGLD--KL 291
Query: 176 GKVQKAKTIFEE 187
GK ++A +++
Sbjct: 292 GKHEEAIASYDK 303
>gi|170734144|ref|YP_001766091.1| TPR repeat-containing protein [Burkholderia cenocepacia MC0-3]
gi|169817386|gb|ACA91969.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia
MC0-3]
Length = 607
Score = 35.3 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 374 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDNLPISDPRDAAVVAR-TDASI 432
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + D +RY + A T Y + K L++L ++P
Sbjct: 433 LFTAKRYPEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYATMEKQLRELIRTQP 488
Query: 157 SNPMHQFANEILGIS-ALKFGKVQKAKTIFEE 187
NP A LG S A + ++ +A + ++
Sbjct: 489 DNP---QAYNALGYSLADRNQRLPEASKLIDK 517
>gi|120609659|ref|YP_969337.1| hypothetical protein Aave_0965 [Acidovorax citrulli AAC00-1]
gi|120588123|gb|ABM31563.1| TPR repeat-containing protein [Acidovorax citrulli AAC00-1]
Length = 1084
Score = 35.3 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 6/97 (6%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV-AN 117
+A +N+ DDA F + + + + V KGD + A F ++ A
Sbjct: 974 RAESAIGANRFDDALRDFATLQKMNPQSQRVA--LGTGMAQVGKGDVQAAIATFNQILAR 1031
Query: 118 DDLAPLAV--RYAATLQAASILVDTSSYEEISKILQK 152
A +A R A +AA L D+ + + L
Sbjct: 1032 TPNAAVAYYGRAMA-YRAAGKLDDSLKDLDRAIALDP 1067
>gi|1162960|gb|AAB40949.1| homologous to HI0366 in Haemophilus influenzae [Pseudomonas
aeruginosa PAO1]
Length = 198
Score = 35.3 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 13/169 (7%)
Query: 25 APLLILMILSLAIWFYLFDG---SHEKKKNIVGENFAQ-ALELFNSNKLDDARSSFEKIL 80
A L+ L+ + L D +K ++ + + Q L + A+ K L
Sbjct: 5 AALVFLLAVGLTGCVTSGDQNPLKTDKGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKAL 64
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPLAVRYAATLQAASILVD 139
D + + + A + + + K A E + +A+D + L +
Sbjct: 65 EIDPSSADAHAAL--AVVFQTEMEPKLADEEYRKALASDSRNARVLNNY-----GGFLYE 117
Query: 140 TSSYEEISKILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIFEE 187
YEE + L + S+ + P E LG+ +L+ K +AK FE+
Sbjct: 118 QKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEK 166
>gi|168702395|ref|ZP_02734672.1| TPR domain protein [Gemmata obscuriglobus UQM 2246]
Length = 1992
Score = 35.3 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
E + + A S + + PL + + +GD + A F ++A D
Sbjct: 1645 EQLAAGDVASAGRSLRTLQETASG---PLVRLRAVQVACRQGDPEPALARFRELAADPDV 1701
Query: 122 PLAVRYAATLQAASILVD 139
TL+ A++ D
Sbjct: 1702 TRG-----TLREAALAFD 1714
>gi|254247179|ref|ZP_04940500.1| TPR repeat [Burkholderia cenocepacia PC184]
gi|124871955|gb|EAY63671.1| TPR repeat [Burkholderia cenocepacia PC184]
Length = 499
Score = 35.3 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 262 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDNLPISDPRDAAVVAR-TDASI 320
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + D +RY + A T Y + K L++L ++P
Sbjct: 321 LFTAKRYPEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYATMEKQLRELIRTQP 376
Query: 157 SNPMHQFANEILGIS-ALKFGKVQKAKTIFEE 187
NP A LG S A + ++ +A + ++
Sbjct: 377 DNP---QAYNALGYSLADRNQRLPEASKLIDK 405
>gi|54294941|ref|YP_127356.1| hypothetical protein lpl2020 [Legionella pneumophila str. Lens]
gi|53754773|emb|CAH16260.1| hypothetical protein lpl2020 [Legionella pneumophila str. Lens]
Length = 322
Score = 35.3 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 48 KKKNIVGEN--FAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGD 104
+ N E + A EL + + D+A S + + + Y + ++ + + K D
Sbjct: 192 SRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKD 251
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAAT-LQAASILVDTSSYEEISKILQKL--SEPSNPMH 161
A E F V P + + AA+ L++ + +E K Q++ + P P
Sbjct: 252 YPKAIEHFEIVLQQ--YPSSSKAAASLLKSGYAYAEKGDTQEAKKRFQQVVKTYPDTPTA 309
Query: 162 QFA 164
Q A
Sbjct: 310 QLA 312
>gi|103485952|ref|YP_615513.1| hypothetical protein Sala_0459 [Sphingopyxis alaskensis RB2256]
gi|98976029|gb|ABF52180.1| hypothetical protein Sala_0459 [Sphingopyxis alaskensis RB2256]
Length = 273
Score = 35.3 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 11/161 (6%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
+ + + ++ L A + S EKK N V A A I++
Sbjct: 3 RLVLTIALVAGLPAAANAATCEQSFEKKGNPVTGLRFIATTNVPGMSAASAVGQLNGIVA 62
Query: 82 QDNKLYNPLSNMYI-ASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
K Y+ L+ ++L+ + T + +++A D VR A L+AA + +
Sbjct: 63 --AKGYDILAAEQESGTMLIEQPQTGKSRSFPIEIAADGAGN--VRMEARLRAAMGVPEA 118
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ E+ IL +L A E L +K A
Sbjct: 119 AAKAEMCGILAQLKGGK------AGEALAAKGMKATTAPGA 153
>gi|332708793|ref|ZP_08428764.1| hypothetical protein LYNGBM3L_32380 [Lyngbya majuscula 3L]
gi|332352335|gb|EGJ31904.1| hypothetical protein LYNGBM3L_32380 [Lyngbya majuscula 3L]
Length = 421
Score = 35.3 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 15/138 (10%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
+ + ++ L++A F+K L + + A GD + A + +
Sbjct: 6 YYRGIDKIRQGDLNEAIEEFDKALEINPNFAE--AYYKRAMARFDLGDQQGALADYTQAL 63
Query: 117 NDDLAPLAV---RYAATLQAASILVD-TSSYEEISKILQKLSEPSNPMHQFANEILGISA 172
+ + V R A L L D T + E+ ++IL+ NP A ++ G +
Sbjct: 64 QINSESIEVYFGRGLARL----ALGDATGAIEDANQILK-----INPNQPAACKLQGSAY 114
Query: 173 LKFGKVQKAKTIFEELAK 190
K G Q A F++ A+
Sbjct: 115 RKLGDNQAAIASFKQAAQ 132
>gi|282899920|ref|ZP_06307881.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195190|gb|EFA70126.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 302
Score = 35.3 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 9/134 (6%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ + L+ K+ DA +F + D L N+ +A L G + AA+ F +
Sbjct: 46 DWLNKGLKAIAEGKVQDAIIAFRQAAQLDPALAPAHYNLGLA--LRQTGKLQPAADAFYQ 103
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYE-EISKILQKLSEPSNPMHQFANEILGISAL 173
P A L A + + + K +L +P FA+ LG++
Sbjct: 104 --ATQADPQFASAFANLGGALLEGNNLPLAIDYLKTALQL----DPKLGFAHYNLGLARQ 157
Query: 174 KFGKVQKAKTIFEE 187
Q+A F++
Sbjct: 158 LQKDWQQAIASFQQ 171
>gi|254674079|emb|CBA09863.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 476
Score = 35.3 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + ++++ P M +A+ L
Sbjct: 97 YLQQAQQDKMLALYAQGILAQTDGRVKEAISHYRELIAAQPDA--PAVRMRLAAALFDNR 154
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 155 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 190
>gi|72161803|ref|YP_289460.1| hypothetical protein Tfu_1399 [Thermobifida fusca YX]
gi|71915535|gb|AAZ55437.1| hypothetical protein Tfu_1399 [Thermobifida fusca YX]
Length = 367
Score = 35.3 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 4/147 (2%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
+QA +L + D A +E++++ Y + + +A + GDT A +
Sbjct: 22 SQARDLAEAGHADRAAELYERVVADAGPRYRAQAALGLAVVRDHLGDTAGARQADET--A 79
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN-PMHQFANEILGISALKFG 176
A A A + + ++ Q + E N A+ L A G
Sbjct: 80 IAAADPEFSPRAAYHLALLCEKEGDGDAAARAWQTVVEFGNQRYLGAAHHGLARLAEARG 139
Query: 177 KVQKAKTIFEELAKDNNSPFGISTRSQ 203
+ A++ ++ + P ++ ++
Sbjct: 140 DDETARSHWQYALNAAD-PQTVADAAR 165
>gi|303232782|ref|ZP_07319467.1| tetratricopeptide repeat protein [Atopobium vaginae PB189-T1-4]
gi|302481268|gb|EFL44343.1| tetratricopeptide repeat protein [Atopobium vaginae PB189-T1-4]
Length = 437
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 49/145 (33%), Gaps = 16/145 (11%)
Query: 54 GENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL 113
G F A +K DA +S L + + M + S ++ +T++A +
Sbjct: 79 GRAFLAA------HKPQDAIASLTCALKDETYKTPYKAYMALGSAYMSLNNTRDAGVAYR 132
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTS-----SYEEISKILQKLSEPSNPMHQFANEIL 168
A D P L IL+ + +Y L++ L
Sbjct: 133 SAAIDAANPKPAEALKHLGRCFILLGRAVDAIEAYRTALDFATPLAD-----QHAIYADL 187
Query: 169 GISALKFGKVQKAKTIFEELAKDNN 193
G++ + ++ +A F KD N
Sbjct: 188 GLAYIAANRMSEAVDAFNHAVKDGN 212
>gi|258544627|ref|ZP_05704861.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258520135|gb|EEV88994.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 574
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 4/100 (4%)
Query: 92 NMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
+A + + GD A + F ++ + L AA + ++ +E++ L
Sbjct: 284 RQLVAQLYASAGDYPAALQAFREILDAHRIDLNSYLFFVANAA----ERANQKEMAATLL 339
Query: 152 KLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD 191
+P + A E L + A A+ F L +D
Sbjct: 340 DEISKDSPRYLQAQERLALLAFARKDYDAAQERFAALRQD 379
>gi|170077429|ref|YP_001734067.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
gi|169885098|gb|ACA98811.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
Length = 714
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 5/96 (5%)
Query: 25 APLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDN 84
L L+ L + S + + QA + N+L+ A + +++IL
Sbjct: 305 VGLAALVGTGLGVHAGWRWWSERQALMA---QYEQAQLSQSQNQLEQALAQYQEILQTVP 361
Query: 85 KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
L + A +L A A E + ++ +
Sbjct: 362 DHEGAL--LGKAQVLQALERFDAAVETYDQLLEVNP 395
>gi|114797729|ref|YP_758944.1| AcrB/AcrD/AcrF family protein [Hyphomonas neptunium ATCC 15444]
gi|114737903|gb|ABI76028.1| AcrB/AcrD/AcrF family protein [Hyphomonas neptunium ATCC 15444]
Length = 1042
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 12/139 (8%)
Query: 27 LLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD-NK 85
+ ++M++ +A + + G++F AL+ + A + IL
Sbjct: 914 IGLIMLIGIAAKNGILIVEFANQLRDEGKDFDTALK-------EAALARLRPILMTGLTT 966
Query: 86 LYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEE 145
L + + A +F +A +A + V A TL A T S +
Sbjct: 967 AAGALPLIITSGAGAETRIAIGAVILFGSLAAVTVALIVVPTAYTLLARR----TGSPGD 1022
Query: 146 ISKILQKLSEPSNPMHQFA 164
+++ L++ + P A
Sbjct: 1023 VTRRLEEETAQVAPAPHPA 1041
>gi|329120374|ref|ZP_08249041.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327462329|gb|EGF08655.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 209
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 9/160 (5%)
Query: 10 YKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKL 69
+ + + K ++ L ++++ A ++ + + +K GE A L +
Sbjct: 7 EQQELENFKYFWRNWGRWLFALLIAGAAAYFAWVMYQQHQKTKNGEAAAALAALVGKAQN 66
Query: 70 DDARSSFEKILSQDNKLYN-----PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ + LS + Y + M +A+ KG A + V + P
Sbjct: 67 SKDDKAVQADLSGLQQNYPSSIAAAQATMMVAADAFDKGRYDEAEKQLSWVLQNQKEP-F 125
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFA 164
V+ A + A++ + Y+ L L+ P++P A
Sbjct: 126 VQALAVQRLATVQMQQKKYD---AALATLNTPTDPAFAAA 162
>gi|218661993|ref|ZP_03517923.1| TPR repeat-containing protein [Rhizobium etli IE4771]
Length = 592
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 15/130 (11%)
Query: 54 GENFAQALELFNSNKLD--DARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
G++ +L L S++ +A +F+K + D + +PL +A + + +G K A
Sbjct: 2 GQSTLNSLGLLQSSRDANGEAEKAFKKAIELDPQ--DPLLRANLAILYLDQGRMKEAKRE 59
Query: 112 FL-KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEPSNPMHQFANEIL 168
+A D +A+ A + + + K LQ L + +NP H + +L
Sbjct: 60 IDTAIALDPSFDIAL--LARGRY-YLQT-----GDRDKALQDLLAASTANPAHSQSQLML 111
Query: 169 GISALKFGKV 178
+ + G
Sbjct: 112 AAAHYEKGDR 121
>gi|156936307|ref|YP_001440223.1| cellulose synthase subunit BcsC [Cronobacter sakazakii ATCC
BAA-894]
gi|156534561|gb|ABU79387.1| hypothetical protein ESA_04207 [Cronobacter sakazakii ATCC BAA-894]
Length = 1167
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 25/82 (30%), Gaps = 9/82 (10%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYN--PLSNMYIASILVAKGDTKNAAEIFLKVAN 117
A L AR + + P + IA+ A GDT A + F +A
Sbjct: 644 AEVLIAQGDNAAAREQLAALQTPAAGGEPRSPGTQRRIANAEAALGDTARAQQAFAVLAA 703
Query: 118 DDLAPLA-------VRYAATLQ 132
+R AA Q
Sbjct: 704 TAKTQPPSQESALVLRDAARFQ 725
>gi|298528185|ref|ZP_07015589.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511837|gb|EFI35739.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 449
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
N + + +A L N LD A + ++I++Q ++ + I + + + A +
Sbjct: 151 NELAQKVDEAKALLMENHLDQAENVVQEIINQKPDS--AIAYILKGDIAKKRKNFEAAEK 208
Query: 111 IFLKVANDDLA-PLAVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEI 167
+++ + ++ A L + + K L+ L + +P++
Sbjct: 209 FYIQASGTSKMYLEPLKKLARLYS--------EMNNLEKKLEYLKKLDKLSPLNHERKID 260
Query: 168 LGISALKFGKVQKAKTIFEE 187
LG + L+ ++AK F++
Sbjct: 261 LGDTYLRMDNEEEAKANFDQ 280
>gi|206559199|ref|YP_002229960.1| hypothetical protein BCAL0804 [Burkholderia cenocepacia J2315]
gi|198035237|emb|CAR51111.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 607
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
D + ++ + +A L K D+AR + + D + ++ ASI
Sbjct: 374 SQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDNLPITDPRDAAVVAR-TDASI 432
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL--SEP 156
L A + D +RY + A T Y + K L++L ++P
Sbjct: 433 LFTAKRYPEAEARLGQAVQDFPDDPDLRYDYAMAAEK----TGHYATMEKQLRELIRTQP 488
Query: 157 SNPMHQFANEILGIS-ALKFGKVQKAKTIFEE 187
NP A LG S A + ++ +A + ++
Sbjct: 489 DNP---QAYNALGYSLADRNQRLPEASKLIDK 517
>gi|288960287|ref|YP_003450627.1| TPR domain-containing protein [Azospirillum sp. B510]
gi|288912595|dbj|BAI74083.1| TPR domain-containing protein [Azospirillum sp. B510]
Length = 496
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 17/141 (12%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
+ A+ + D A ++ +IL+ D + L + +GD A +
Sbjct: 6 DALDTAVNHHMAGHADAAADAYRRILTADPAQPDTLH--LSGVLWAQRGDAAAAVRWIGR 63
Query: 115 VAND-DLAPLAVRYA-ATLQAASILVDTSSYEEISKILQKL---SEPSNPMHQFANEILG 169
AP + A L+AA E+ + + + + +P A E LG
Sbjct: 64 AVRVRPSAPAPWGHLGAALRAA----------ELPQRAEPVLRRALALDPADGDALEALG 113
Query: 170 ISALKFGKVQKAKTIFEELAK 190
S + A+ E A+
Sbjct: 114 ASLHALARYPDARRWLERAAR 134
>gi|139439721|ref|ZP_01773112.1| Hypothetical protein COLAER_02143 [Collinsella aerofaciens ATCC
25986]
gi|133774871|gb|EBA38691.1| Hypothetical protein COLAER_02143 [Collinsella aerofaciens ATCC
25986]
Length = 411
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 37/135 (27%), Gaps = 8/135 (5%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA 121
L A +F + + + + + L GD NA F + A D
Sbjct: 58 ALAAVGDYTTAAQAFSAATQDASYATPFKAYLGLGNALFQSGDYANAGTAFRQAAIDGAN 117
Query: 122 PLAVRYAATLQAASILVDTSSYEEISKILQ---KLSEPSNPMHQF-ANEILGISALKFGK 177
P L I + + + + + P + A +SA G+
Sbjct: 118 PAPAAALGELGRCFIKL--GRPADAVETYRTAIDFAGPRDDTRALNAGMGQALSA--AGR 173
Query: 178 VQKAKTIFEELAKDN 192
A F D
Sbjct: 174 PSDALDAFNAATADG 188
>gi|159045958|ref|YP_001534752.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12]
gi|157913718|gb|ABV95151.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12]
Length = 502
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 9/139 (6%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
K+ +++A + + K+D A + + L + A + + G
Sbjct: 231 RDVHKRRDAVLAYSEAADAVEAGKMDKAEAHANEANRLAPGLVPSAA--LAARMAIRAGK 288
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFA 164
+ A ++ K + P A + V + K + L +P NP H +
Sbjct: 289 QRQATKLLRKAWELNPHPELAAAYAEI------VPDETAAARIKRFEALVKP-NPNHDES 341
Query: 165 NEILGISALKFGKVQKAKT 183
++ + A+
Sbjct: 342 RLLMAELFIAAEDFPAARK 360
>gi|313885975|ref|ZP_07819713.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924505|gb|EFR35276.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 219
Score = 35.0 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 68 KLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRY 127
AR+++ +++D+ + + + L GDT A +++ ++A+D A ++
Sbjct: 38 NYSSARAAYLSSVARDSTYAP--ARLGLGDALYMSGDTVAAVQMWQRIASDSKADPRLQA 95
Query: 128 AATLQAASILVDTSSYE 144
A + +DT Y+
Sbjct: 96 LAWHNLGNRCMDTQQYD 112
>gi|329114785|ref|ZP_08243542.1| Hypothetical protein APO_1583 [Acetobacter pomorum DM001]
gi|326695916|gb|EGE47600.1| Hypothetical protein APO_1583 [Acetobacter pomorum DM001]
Length = 411
Score = 35.0 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILS----QDNKLYNPLSNMYIASILVAKGDTK 106
VG A ++ A + + D + Y ++ M A++ G+
Sbjct: 33 QQVGTELEAAQSALAAHNYAKAMDAVNAADAVKGKTDYEDY-TIAQMR-AAVATQAGNLS 90
Query: 107 NAAEIFLKVANDDLAPLAVRY 127
A + K+ P A++
Sbjct: 91 AATAAYDKLIASPRTPQAMKN 111
>gi|320530530|ref|ZP_08031587.1| tetratricopeptide repeat protein [Selenomonas artemidis F0399]
gi|320137203|gb|EFW29128.1| tetratricopeptide repeat protein [Selenomonas artemidis F0399]
Length = 423
Score = 35.0 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 69 LDDARSSFEKILSQD---NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
DDA + F +D Y ++ ++ A+ + + + A E +LK+A DD A
Sbjct: 281 YDDALADFTAAQKRDVKRPAPYLGIALVHAAA--GHRKEARAAYERYLKLAPDDAA---- 334
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
A +L+DT + ++ + L++ + +NP A LG++ L+ + A
Sbjct: 335 ---ARYNYGLVLLDTGAADKAAAALRQ-TVAANPQTADAMNALGLAQLRSKDYRGA 386
>gi|254389220|ref|ZP_05004449.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197702936|gb|EDY48748.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 978
Score = 35.0 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 23/176 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKGDTKNAAEIFL 113
A + + ++A E++L+ + L+ +A+ G T+ A E+
Sbjct: 631 AASYQQAGRTEEAIELLEQVLTARERVLGPNHRDTLTTRTNLAASYQQAGRTEEAIELLE 690
Query: 114 KV--ANDDLAPLAVRYAATLQ---------AASILVDTSSYEEISKILQKLSEPSNPMHQ 162
+V A++ + T + A E++ +++ P++P
Sbjct: 691 QVLTASERVLGPNHPDTLTTRTNLAASYQQAGRTEEAIELLEQVLTASERVLGPNHPDTL 750
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMILANIIAS 212
A L S + G+ ++A + E++ + P ++TR + ++ A
Sbjct: 751 TARGNLAASYQQAGRTEEAIELEEQVLTARDRILGPDHPNTLTTRGNLAFSHWQAG 806
>gi|84624801|ref|YP_452173.1| thioredoxin [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84368741|dbj|BAE69899.1| thioredoxin [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 285
Score = 35.0 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 103 GDTKNAAEIFLKV-ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
GDT A ++ + AN AVR A L A++L D + + +N
Sbjct: 163 GDTAEAEQLIDALPANLATDDRAVRAKARLSFANVLKDAPDAGTLQA-----TVDANGAD 217
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
A +LG+ L G + A F E+ + + + R +I A
Sbjct: 218 LRARHLLGVRHLLDGNDEAALEQFLEMLRQDRTFDDNRPRRSLIDA 263
>gi|32477301|ref|NP_870295.1| hypothetical protein RB12056 [Rhodopirellula baltica SH 1]
gi|32447852|emb|CAD77370.1| conserved hypothetical protein containing TPR domain
[Rhodopirellula baltica SH 1]
Length = 1113
Score = 35.0 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 3/140 (2%)
Query: 57 FAQALELFNSNKLDDARSSFEKI-LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+A+ + L D A+SS++++ + + + + + + +G+ + A E F V
Sbjct: 212 YARGVALEEQKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDMHLLQGEMQKAVERFDSV 271
Query: 116 ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISAL 173
+ A + + + + S +KL P +P A +
Sbjct: 272 VTNADATAEDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLY 331
Query: 174 KFGKVQKAKTIFEELAKDNN 193
+ G + A + F ++ + +
Sbjct: 332 QAGDLSGAASRFRDVLQGTD 351
>gi|330877578|gb|EGH11727.1| thioredoxin [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 290
Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + +++L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQALFAESRFSEAETVLKQLLGEDNTNAAAL--IMYARCLAERGELSEARAV 176
Query: 112 FLKVANDDLAPLAVRYAATLQ---AASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
V D A L A+ L D E+ L + + HQ A + L
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAEAATLPDA---AELKSRLAQNPQDDEAAHQLAIQQL 233
Query: 169 GISALKF 175
+
Sbjct: 234 SRQQYEA 240
>gi|307610773|emb|CBX00385.1| hypothetical protein LPW_21061 [Legionella pneumophila 130b]
Length = 326
Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 48 KKKNIVGEN--FAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGD 104
+ N E + A EL + + D+A S + + + Y + ++ + + K D
Sbjct: 196 SRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKD 255
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAAT-LQAASILVDTSSYEEISKILQKL--SEPSNPMH 161
A E F V P + + AA+ L++ + +E K Q++ + P P
Sbjct: 256 YPKAIEHFEIVLQQ--YPSSSKAAASLLKSGYAYAEKGDTQEAKKRFQQVVKTYPDTPTA 313
Query: 162 QFA 164
Q A
Sbjct: 314 QLA 316
>gi|281420950|ref|ZP_06251949.1| putative tetratricopeptide repeat-containing domain protein
[Prevotella copri DSM 18205]
gi|281404868|gb|EFB35548.1| putative tetratricopeptide repeat-containing domain protein
[Prevotella copri DSM 18205]
Length = 352
Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 8/151 (5%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A LF K D+A +EK+++Q + SN + + D + A + + K
Sbjct: 167 AYSLFMQFKYDEAIPLYEKLIAQGFDNFE--SNFILGLCYEDQPDNEKALKHYQKAVQFK 224
Query: 120 LAPLA-VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKV 178
+ + A ++ + +D+ S ++ L+ + + + L + +
Sbjct: 225 NDNATCLFHLALIEKSFC-MDSLSMAHFNQSLEVSLPKDRALRTY--KWLADLHFQHSRY 281
Query: 179 QKAKTIFEE--LAKDNNSPFGISTRSQMILA 207
A FE L + + P +QM +A
Sbjct: 282 ADAARDFELCILYDEEDDPLNYYNAAQMFIA 312
>gi|167569734|ref|ZP_02362608.1| hypothetical protein BoklC_07828 [Burkholderia oklahomensis C6786]
Length = 209
Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 3/163 (1%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
+ ++ + + Q + SN + + A+
Sbjct: 38 WNGWNYWQRHQAAQAAVLYEQVQQAVQSNDKAKVARVASDMEDKFGGTAYAQMTALEAAK 97
Query: 99 LVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN 158
+ A+ L+ A D + A L+ AS+L+D +Y+ +L PS+
Sbjct: 98 ALYGAGDAAGAKAQLQWAADHAKDDEYKQIAKLRLASLLLDEKAYDAGLALLSG--TPSD 155
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTR 201
+ G GK A+ + +LA D+ S S R
Sbjct: 156 AFKGIVADRRGDLLAAQGKSDDARAAY-KLALDSLSKDDASAR 197
>gi|17545370|ref|NP_518772.1| tight adherence TadB-related transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|17427662|emb|CAD14181.1| probable pilus assembly tadb transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 325
Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 22 KWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILS 81
++ + + + L + + + + + AL L +++ +A +++LS
Sbjct: 7 GFLLSVFVAIALGVLGAYQWWSTHRSQTARRLSHRLETAL-LNSASHNKEASILKQRVLS 65
Query: 82 QDNKLYNPLSNM 93
+ L +
Sbjct: 66 DSPEFARLLQRL 77
>gi|110633069|ref|YP_673277.1| tetratricopeptide TPR_2 [Mesorhizobium sp. BNC1]
gi|110284053|gb|ABG62112.1| Tetratricopeptide TPR_2 [Chelativorans sp. BNC1]
Length = 677
Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
F L L + + D+A + +K+L D K + + + + ++ + K AAE++
Sbjct: 351 EFQIGLNLADLERNDEAVAHLKKVLEADPKDLR--AYLALGGVYSSQKNYKAAAELYDDA 408
Query: 116 ANDDLAP 122
+ P
Sbjct: 409 VAEIPEP 415
Score = 35.0 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV----ANDDLA 121
D +S E + Y + A IL +G T+ A F +V A +A
Sbjct: 157 QGDADGGLTSLENL--SGPPWYELFKAYHRALILANEGRTEEADAAFDQVISELAPRSVA 214
Query: 122 PLAVRYAATLQAASI 136
P + A + A+ +
Sbjct: 215 PDTLGRLAEVYASYL 229
>gi|116749145|ref|YP_845832.1| ComL family lipoprotein [Syntrophobacter fumaroxidans MPOB]
gi|116698209|gb|ABK17397.1| lipoprotein, ComL family [Syntrophobacter fumaroxidans MPOB]
Length = 258
Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 11/113 (9%)
Query: 16 MGKCCYKWIAPLLILMILSLAIW-----FYLFDGSHEKKKNIVGENF-----AQALELFN 65
+ PLL L++++ FY D KK + + + ++
Sbjct: 9 RKVYRFAAFVPLLSLVLVTGGCGTFLGEFYFGDLLGGKKSSSTVDKTAEQLAVEGMQKMQ 68
Query: 66 SNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
DDA +F K+ Y L+ + I L AA + + A
Sbjct: 69 KKDYDDALKAFRKLKEHYPYSKYAILAELKIGDALFHDKKYSEAAIAYEEFAR 121
>gi|83312890|ref|YP_423154.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
magneticum AMB-1]
gi|82947731|dbj|BAE52595.1| Predicted O-linked N-acetylglucosamine transferase
[Magnetospirillum magneticum AMB-1]
Length = 636
Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL--- 113
F QA+ L + + + AR S EK + + Y + + + ++ A G A + +
Sbjct: 24 FNQAVTLSAAGRPEQARVSLEKSIELNPDFYP--AYINLGGVMEALGQPDAAVDTWNGLV 81
Query: 114 -KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
++ + ++ A Q A +L D +L++ E N + A +L
Sbjct: 82 TRLGAITGHGIRMKCTALKQIARVLEDRHQIVAAENVLRQSLELDNTQRENAEHLLA 138
>gi|302343326|ref|YP_003807855.1| hypothetical protein Deba_1896 [Desulfarculus baarsii DSM 2075]
gi|301639939|gb|ADK85261.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
2075]
Length = 583
Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 66/156 (42%), Gaps = 17/156 (10%)
Query: 66 SNKLDDARSSFEKILSQDN---KLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
+K DA +++ ++L + ++ L Y+++ G + A F V
Sbjct: 230 QHKYRDAEATYLRVLDLNPDSTAGHDRLGRFYLST-----GRYQEALREFAVVKGLSRDD 284
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
VR L+ + + Y + ++ + +++ P + A LG+S GK +A
Sbjct: 285 SEVR----LKIGLVYYEQGKYNQAAEEFRAIAKD-EPDNHRARYYLGVSLQDGGKGDQAL 339
Query: 183 TIFEELAKDNNSPFGISTRSQMILANIIASDQRNKK 218
T FE + D++ +++ +A+I+ + R +
Sbjct: 340 TAFERIPPDSDMYVD----ARLHMADILVKNGRTNE 371
>gi|242084478|ref|XP_002442664.1| hypothetical protein SORBIDRAFT_08g000860 [Sorghum bicolor]
gi|241943357|gb|EES16502.1| hypothetical protein SORBIDRAFT_08g000860 [Sorghum bicolor]
Length = 982
Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+L DA+ +F+++L + L + + G + A + + + P
Sbjct: 635 AKCGRLLDAQKAFDEMLHPGTVSWTALI-----TAYMDAGRAQEAVGVARRAFASGMRPD 689
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+V L A + + D + E + K+ ++ N A L + +K G++ KA+
Sbjct: 690 SVTAVRVLTACARVADLVNGEAVWKVAEQEGIAGNMFVATA--ALDL-YVKCGEMDKARE 746
Query: 184 IFEEL 188
+F+++
Sbjct: 747 VFDKM 751
>gi|195164283|ref|XP_002022978.1| GL16562 [Drosophila persimilis]
gi|194105040|gb|EDW27083.1| GL16562 [Drosophila persimilis]
Length = 569
Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 33/86 (38%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
N V F +AL F + +D + + + Y + + + + G +
Sbjct: 248 NEVLRGFPRALWAFREERFEDVIPACTEEIDTLESQYKTEARLMRGTFHLLSGSFYECHQ 307
Query: 111 IFLKVANDDLAPLAVRYAATLQAASI 136
F V D A +R A +++A++
Sbjct: 308 DFEAVIGDAKANNELRAYALIRSAAL 333
>gi|268317073|ref|YP_003290792.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
4252]
gi|262334607|gb|ACY48404.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
4252]
Length = 1000
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Query: 65 NSNKLDDARSSFEKILSQD-NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
++ + DDAR +F + L + ++A G A + ++A D
Sbjct: 116 DTGRYDDARQAFGQALRPGVPATQAARALFWMAESAQRLGRPAEAIGYYRRLA-DTYPNT 174
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISALKFGKVQKA 181
+ A L A V+ +Y+E ++ + L+ P+ P + L + G ++A
Sbjct: 175 RLAPQALLAMAYTQVEMGAYDEAARTFEVLAARYPAAPEARGLGLALAQVYYELGDYRRA 234
Query: 182 KTIFEE 187
+
Sbjct: 235 IDEVQR 240
>gi|37526324|ref|NP_929668.1| hypothetical protein plu2428 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785755|emb|CAE14802.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 389
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 59/165 (35%), Gaps = 40/165 (24%)
Query: 32 ILSLAIWFYLFDGSHEKKKNIV---GENFAQALELFNSNKLDDARSSFEKILSQDNKLYN 88
+ + W+ + + K+ + + SN+ D A F ++L +D+ +
Sbjct: 11 VAAAYGWYMGRRSAQQDKQQNADRLSREYVAGVNFLLSNQQDKAVDLFLEMLKEDSSAFE 70
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
+++ + ++ ++G+ + A I + +++AS+ D
Sbjct: 71 --AHLTLGNLFRSRGEVERAIRIHQSL---------------MESASLTFDQ-------- 105
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
A + LG + G +A+ +F +L + +
Sbjct: 106 ------------RLLATQQLGRDYMSAGLYDRAENMFAQLVNEKD 138
>gi|218768909|ref|YP_002343421.1| hypothetical protein NMA2174 [Neisseria meningitidis Z2491]
gi|121052917|emb|CAM09269.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
Length = 490
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
+ +++ + +AQ + ++ +A S + +++ M +A+ L
Sbjct: 111 YLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIVAQPDAPAV--RMRLAAALFENR 168
Query: 104 DTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139
+ AA+ F ++ ++L P + + A D
Sbjct: 169 QNEAAADQFDRLKAENLPPQLMEQVELYRKALRERD 204
>gi|148263817|ref|YP_001230523.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146397317|gb|ABQ25950.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 207
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 63/176 (35%), Gaps = 16/176 (9%)
Query: 20 CYKWIAPLLILMILSLAIWFYLFDGSHEKKKNI-----VGENFAQALELFNSNKLDDARS 74
++A L++ +I ++A+ + S ++K E F + LEL S +A
Sbjct: 24 VRLFLATLIVTLITAIAVHGAVEPKSAPREKGAVDFTGAAEWFRKGLELNRSGSYREAAE 83
Query: 75 SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATL--Q 132
+F K+++ N+ AS + + + AA + V + A + +
Sbjct: 84 AFRKVIAITPADAAAWFNLGTASAFLGNHE-EAAASLKQAVRLNPDFLPAYGNLGGIYYR 142
Query: 133 AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEEL 188
+Y ++ L+ A G++ G A+ ++ L
Sbjct: 143 LGRFQEAIEAYGQVL-RLKPDDA-------NARFNRGMAYYAMGDKDSARKEYDML 190
>gi|317163744|gb|ADV07285.1| IgA-specific metalloendopeptidase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 1593
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 49/157 (31%), Gaps = 5/157 (3%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ N E Q + K A + + + A + + A
Sbjct: 1021 QANQAEEALRQQAK-AEQVKRQQAEAGRKSAELSAKQRAGEEERRQTAQSQPQRRKRRAA 1079
Query: 109 AEIFLKVANDDLAPLAVRYAAT--LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
+ ++ V+ D R ++ A + + ++ + +L + E
Sbjct: 1080 PQDYMAVSQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKAAELLAKQRA--EAERE 1137
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
++A + + ++AK ELA + + ++
Sbjct: 1138 AQALAARRKAEAEEAKHQAAELAHRQEAKRKAAESAK 1174
>gi|302189346|ref|ZP_07266019.1| thioredoxin [Pseudomonas syringae pv. syringae 642]
Length = 290
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQALFAESRFAEAEAQLKVLLGEDNTNGAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + + Q A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDAAELKSRLAQNPQDDEAALQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|182438868|ref|YP_001826587.1| TPR repeat-containing protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178467384|dbj|BAG21904.1| hypothetical protein containing tetratricopeptide repeats
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 1512
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 69/185 (37%), Gaps = 23/185 (12%)
Query: 47 EKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQ-----DNKLYNPL-SNMYIASILV 100
E+ + + + A L+ ++++A + +E++L+ + + L + +A+
Sbjct: 788 ERHPDTLSARASVAASLYAVGRVEEAMALYERVLADCEEVLGERHPDTLSARASLATSYG 847
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRY----------AATLQAASILVDTSSYEE-ISKI 149
G A + V D L R+ AA+ AA + D + E +
Sbjct: 848 RAGRVGEAMALREAVLADREEVLGERHPDTLSARANLAASFYAAGRVEDAIALETRVLAD 907
Query: 150 LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQ 203
+++ +P A L S + G+V +A + E + D P +S R
Sbjct: 908 SEEVLGERHPDTFSARASLATSYSRAGRVGEAMALRERVLADCEEVLGGRHPDTLSARVN 967
Query: 204 MILAN 208
+ +
Sbjct: 968 LAASL 972
>gi|330872881|gb|EGH07030.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
syringae pv. morsprunorum str. M302280PT]
Length = 252
Score = 35.0 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 68/184 (36%), Gaps = 9/184 (4%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQ-ALELFNSNKLDDARSSFEKILSQDNKL 86
++++ + + + + + Q L F + + A+ +K L D+
Sbjct: 11 AVVLLTGCVSTGNVNPMTTTQGREEARRAYVQLGLGYFQQGQTERAKVPLKKALELDSSD 70
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
+ + A + + + + A + F K + S L + Y+E
Sbjct: 71 AQANAAL--ALVFQTEMEPQLAEQYFRKALASSNNETRIVN----NYGSFLFEQKRYQEA 124
Query: 147 SKILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIF-EELAKDNNSPFGISTRSQM 204
+ ++ + + P E LG+++LK G ++A+ F + L D P + +Q+
Sbjct: 125 YERFEQAAADNLYPERSRVFESLGMTSLKLGNREQAREQFTKALRLDRQQPRSLLEMAQL 184
Query: 205 ILAN 208
+
Sbjct: 185 YYED 188
>gi|300788310|ref|YP_003768601.1| LuxR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299797824|gb|ADJ48199.1| LuxR family transcriptional regulator [Amycolatopsis mediterranei
U32]
Length = 854
Score = 35.0 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 9/140 (6%)
Query: 77 EKILSQDNKLYNPLSNMYIASILVAKGDTKNA-------AEIFLKVANDDLAPLAVRYAA 129
+ + + L+ + + ++L + + A ++ L +R A
Sbjct: 538 DALRAHGGAPMAGLAEVPLGTLLYERDELVEARTHLVDGIARCEQLGTTSYTLLGLRTLA 597
Query: 130 TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189
L AS VD ++ Q + + + L+ G A+ E+
Sbjct: 598 RLHHASGRVDAGFEALLAARRQADAAEDYRRARLVVATIAELHLRSGNSAAAEQALAEIT 657
Query: 190 KDNNSPFGIST--RSQMILA 207
+D S R+++++A
Sbjct: 658 RDQPSSSDYEQLTRARLLIA 677
>gi|297159761|gb|ADI09473.1| protein kinase family protein [Streptomyces bingchenggensis BCW-1]
Length = 785
Score = 35.0 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 62/210 (29%), Gaps = 25/210 (11%)
Query: 12 GKCKMGKCCYK--WIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKL 69
++ W L+ L ++A FD + A +
Sbjct: 552 IGGDRAPYEWRLNWHRALVRLAEGAVAEARREFDAVYGALPGEYAPKLALGYCAEHLADH 611
Query: 70 DDARSSFEKI---LSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN-----DDLA 121
D A ++ + L+ + +A+ GD A ++ +V D
Sbjct: 612 DAAERFYQAVWQRNRSQGSAAFGLARLRLAA-----GDRTGAVDVLSEVPKVSRHHDAAQ 666
Query: 122 PLAVRYAA-TLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL------- 173
VR A L L + + E+ L +L A E L
Sbjct: 667 IATVRVLAGRLGHPDGLPTEADFAEVLTRLPRLYLDDGRSSGHARERLTAEVWEVALDWV 726
Query: 174 -KFGKVQKAKTIFEELAKDNNSPFGISTRS 202
++G ++A +F + ++ + R+
Sbjct: 727 LRYGNKEEAGALFGKRDEEAVVRADL-ERA 755
>gi|291303778|ref|YP_003515056.1| SARP family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290572998|gb|ADD45963.1| transcriptional regulator, SARP family [Stackebrandtia nassauensis
DSM 44728]
Length = 1034
Score = 35.0 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 5/101 (4%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLS---NMYIASILVAKGDTKNAAEIF 112
F A+ + + DA + + L+ + + +A GD A
Sbjct: 788 TFETAMAQIGAGRFADASMTLAEALASRPGGDDFVEMEIRNRLAQCAFRLGDAAGALRDL 847
Query: 113 LKV--ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQ 151
+ + R T +A + + + + + L
Sbjct: 848 DRAIELANRRGDQQARARFTYNSAELQLHAGNPADTLERLS 888
>gi|330965913|gb|EGH66173.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 252
Score = 35.0 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 68/184 (36%), Gaps = 9/184 (4%)
Query: 28 LILMILSLAIWFYLFDGSHEKKKNIVGENFAQ-ALELFNSNKLDDARSSFEKILSQDNKL 86
++++ + + + + + Q L F + + A+ +K L D+
Sbjct: 11 AVVLLTGCVSTGNVNPMTTTQGREEARRAYVQLGLGYFQQGQTERAKVPLKKALELDSSD 70
Query: 87 YNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI 146
+ + A + + + + A + F K + S L + Y+E
Sbjct: 71 AQANAAL--ALVFQTEMEPQLAEQYFRKALASSNNETRIVN----NYGSFLFEQKRYKEA 124
Query: 147 SKILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIF-EELAKDNNSPFGISTRSQM 204
+ ++ + + P E LG+++LK G ++A+ F + L D P + +Q+
Sbjct: 125 YERFEQAAADNLYPERSRVFESLGMTSLKLGNREQAREQFTKALRLDRQQPRSLLEMAQL 184
Query: 205 ILAN 208
+
Sbjct: 185 YYED 188
>gi|288933094|ref|YP_003437153.1| cellulose synthase operon C domain protein [Klebsiella variicola
At-22]
gi|288887823|gb|ADC56141.1| cellulose synthase operon C domain protein [Klebsiella variicola
At-22]
Length = 1350
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 18/162 (11%)
Query: 63 LFNSNKLDDARSSFE--------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
L NK +A++ + K+ + + A V+ G+ A +
Sbjct: 429 LREQNKSAEAQAMLQTLPQSLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPGGAIATLRE 488
Query: 115 VANDDLAPLAVR-YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
+R A +L + + E S ++ P A + A
Sbjct: 489 GVARYPDDPWLRLDLAR-----LLQKSGNGSEASSLMSAAYRPGAS--NNALYAAALFAS 541
Query: 174 KFGKVQKAKTIFEELAKDNNSP--FGISTRSQMILANIIASD 213
+ G Q+A+T+ + + + + R L A +
Sbjct: 542 ENGAWQQAQTLLARIPGGSQTSDMRDLRQRVNYNLQLATAEN 583
>gi|290956404|ref|YP_003487586.1| hypothetical protein SCAB_18981 [Streptomyces scabiei 87.22]
gi|260645930|emb|CBG69021.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 1329
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 27/149 (18%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLY------NPLSNMYIASILVAKGDTKNAAEIFL 113
A L + + +A +L + L M +A + A+G + A +
Sbjct: 1103 AGSLRRAGQPVEAEELVRHVLRSTPEGEKGSSSERSLLEMSLAGDMAAQGRVEEALTLIR 1162
Query: 114 KVAND-----------------DLAPLAVRYAATLQ--AASILVDTSSYEEISKILQKLS 154
+V +D + A L + AT++ AA + + + +L+
Sbjct: 1163 RVLDDLRNNLGDGHSQTVACSVNYAVLLLDDIATIRPEAAEKAYELLLWAQ--ATFCELN 1220
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKT 183
+P L ++ GK +A+
Sbjct: 1221 GDHHPYVLICRANLAVAEAALGKWDEARK 1249
>gi|82701510|ref|YP_411076.1| tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
gi|82409575|gb|ABB73684.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
Length = 929
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 21/172 (12%)
Query: 45 SHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD 104
+K N + A KL A ++ +L + K L+N+ A+ + D
Sbjct: 773 WLKKHPNDLSARMYLADTFLTEGKLAAAVEQYQTVLKEQPKFAPALNNL--ATAYQRQKD 830
Query: 105 TKN---AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
+ A + + + + +L++ + L + + +
Sbjct: 831 PRALEYAEKAYQLATENPAVLDTL--------GWVLLEQEN----IARALPLLQKAASLA 878
Query: 162 QFANEI---LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANII 210
A EI + +K G +A+ E++ + GI ++ +L I
Sbjct: 879 PQAGEIRYHFASALVKSGNKSQARKELEQILATGKTFSGIDE-ARALLERIQ 929
>gi|332140188|ref|YP_004425926.1| putative unknown membrane associated protein [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550210|gb|AEA96928.1| putative unknown membrane associated protein [Alteromonas macleodii
str. 'Deep ecotype']
Length = 441
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 5/145 (3%)
Query: 55 ENFAQALELF-NSNKLDDARSSFEKIL-SQDNKLYNPLSNMYI--ASILVAKGDTKNAAE 110
E A+A + +++A + +++ D+ + MY I D A E
Sbjct: 57 EQLARAQTAADEAGNVEEAIAILKEVEDKSDSMNAYEKAMMYNFFGFIYYNNEDYAKALE 116
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK-LSEPSNPMHQFANEILG 169
F KV P A + + +Y+E L++ S + P+ I
Sbjct: 117 SFAKVVEQQPIPEKFEMTTLFSLAQLNLMQGNYDETITYLERWESLNTGPVPVKNKVIKA 176
Query: 170 ISALKFGKVQKAKTIFEELAKDNNS 194
+ + + +A E D+ +
Sbjct: 177 QAYYQNKQYDEAAMWISEAVADHEA 201
>gi|326928025|ref|XP_003210185.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2-like
[Meleagris gallopavo]
Length = 1814
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 61/170 (35%), Gaps = 22/170 (12%)
Query: 68 KLDDARSSFEKILSQDNKLYNPLSNM-YIASILVAKGDTK--NAAEIFLKV----ANDDL 120
K D A + + ++ + + + K D A K A +
Sbjct: 1464 KADSALDRARHAQEELRRAAGEVAQLSHRVAEAKGKADEAWLQAQAALDKANQTRARVEH 1523
Query: 121 APLAVRYAATLQAASILVDTSSYEEIS---KILQKLSEPSNP--MHQFANEILG----IS 171
+ +R + A + + + E I + +LS P++P +H+ A EI ++
Sbjct: 1524 SNKELRELISHVKAFLSQEGADPESIEVVASRVLELSLPASPAQIHRLAEEIKARVRSLA 1583
Query: 172 ALKF------GKVQKAKTIFEELAKDNNSPFGISTRSQMILANIIASDQR 215
++ G V++A + ++ + G+ ++ + + + Q
Sbjct: 1584 SVDAILEQTAGDVRQAGQLLQDAQRAKARAEGVRGTAEAVQQALEEARQA 1633
>gi|218672336|ref|ZP_03522005.1| trifolitoxin synthesis protein [Rhizobium etli GR56]
Length = 291
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 10/118 (8%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+ D++ F++ + + L++ A L GD A ++ + P
Sbjct: 143 RRFDESLEYFQQAQDLNPNDADILADY--ADALCHNGDFDKALDLNKAAFKLNPLPPDYY 200
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
Y I D Y + + L+ + +L + G ++KA +
Sbjct: 201 YWNR---GGIHFDRGEYRQTIEALEPVKSKQATAR-----LLAAAHAMAGDMKKAGSY 250
>gi|166031698|ref|ZP_02234527.1| hypothetical protein DORFOR_01398 [Dorea formicigenerans ATCC
27755]
gi|166028675|gb|EDR47432.1| hypothetical protein DORFOR_01398 [Dorea formicigenerans ATCC
27755]
Length = 468
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAAT--LQAASILVDTSSYEEISKILQKLSEPSNPMH- 161
++ + D+L A +AA D+ Y+ + L+ + + +
Sbjct: 333 NADSLGAVGRAKFDELTGKIYPDACKKQYRAAKEAYDSGEYDTVISSLETVMQMDESYND 392
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAK 190
A +L K G KA T ++++ +
Sbjct: 393 GAAMLLLAQGYEKKGDQDKANTTYQKIIE 421
>gi|120554730|ref|YP_959081.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
gi|120324579|gb|ABM18894.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
Length = 189
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 8/140 (5%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVA 116
F++A++ +AR+ FE++ P++N+ I I +GD A E F +
Sbjct: 42 FSEAVKAMKQGNFTEARTVFEQLARNYPDKAGPMANLGI--IAFREGDADGAKEWFERAR 99
Query: 117 NDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG-ISALKF 175
+ P V+ L I + ++E ++ + + ++P + A L + +
Sbjct: 100 AVN--PEHVQALNHL--GVIARNAGEFDE-AERYYRAALAADPDYAPAILNLAFLLDIYL 154
Query: 176 GKVQKAKTIFEELAKDNNSP 195
G A ++E + P
Sbjct: 155 GNPADAIELYERYQSAASEP 174
>gi|239618068|ref|YP_002941390.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF
19.5.1]
gi|239506899|gb|ACR80386.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF
19.5.1]
Length = 355
Score = 35.0 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 10/119 (8%)
Query: 69 LDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYA 128
L++A+ + + L K + A + FL++ D A
Sbjct: 80 LEEAKLDLSTFKNGTFSGFRD-----KVMALADKSEYGEA-QAFLQMLYDAGLDQA--AM 131
Query: 129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
A ++ ++ ++ +E K L++ + NP A LG + GK ++A +E+
Sbjct: 132 AEMK-GTLYIEEGKIDEGIKWLEE-AIEKNPALVSAYSALGQAYFNMGKYEEAAQYWEK 188
>gi|189346154|ref|YP_001942683.1| hypothetical protein Clim_0617 [Chlorobium limicola DSM 245]
gi|189340301|gb|ACD89704.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
245]
Length = 579
Score = 35.0 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 14/167 (8%)
Query: 46 HEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDT 105
+ F AL L A + + N + + + S +
Sbjct: 50 RDSSAEHAKNRFIAALLLAEKGDFWGAIDGYRSVQL--NGSFAEAARDHAISASFLELGV 107
Query: 106 KNAAEIFLKVANDDLAPLA---VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQ 162
++A ++ + A P +R A + A ++ D EI + L +L ++
Sbjct: 108 IDSARVYAEKAA-AGEPENRYYLRMLAAV--AHLMKDYPRAVEIYRQLVQLEPQNSDYLT 164
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
+L + + G ++A IF+ L + P STRSQ++L I
Sbjct: 165 ----LLALEHIAAGDPEQALGIFQRLLSLD--PSNNSTRSQVLLLEI 205
>gi|111021773|ref|YP_704745.1| C4-dicarboxylate transporter [Rhodococcus jostii RHA1]
gi|110821303|gb|ABG96587.1| probable C4-dicarboxylate transport protein, DAACS family protein
[Rhodococcus jostii RHA1]
Length = 488
Score = 35.0 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 12/107 (11%)
Query: 1 MESNNDANSYK---GKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENF 57
ME + A +Y+ K + Y W+ LI ++L + + + D + +G F
Sbjct: 1 MEIPSSAATYQPATVKKPWYRQLYFWV---LIAIVLGILVGWLWPD--TGEAMEPIGTTF 55
Query: 58 AQALELFNSN----KLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
A+++ + +S + L+ + +IL
Sbjct: 56 ITAMKMLICPIVFLTIVGGIASVADLKKVGLTGIKALTYFQVGTILA 102
>gi|329891199|ref|ZP_08269542.1| thioredoxin family protein [Brevundimonas diminuta ATCC 11568]
gi|328846500|gb|EGF96064.1| thioredoxin family protein [Brevundimonas diminuta ATCC 11568]
Length = 299
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 8/139 (5%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
N L A +F +L+ + ++ M A + + +GD + AA+ D P
Sbjct: 143 NDLGGAAQAFAHVLTMEPDNQKAIAGM--ARVYLVEGDAEQAAQTIAMAPADSTEPTVQA 200
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFE 186
A L AS T + E+ L A L + G ++ A
Sbjct: 201 VRAQLSLASAA-PTGATAELEARLAANKND-----HEARFDLAQALASAGDLKGAVDHLL 254
Query: 187 ELAKDNNSPFGISTRSQMI 205
+ + + R Q++
Sbjct: 255 TIVQAEREWNDQAARKQLL 273
>gi|189219588|ref|YP_001940229.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189186446|gb|ACD83631.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 350
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 50/157 (31%), Gaps = 16/157 (10%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGDTKNA 108
+ + A + + ++A ++ ++ + ++ P + I L KGD A
Sbjct: 47 ASSSRDQLNLAKKFEEAKDYENALKAYRILIRKWPYAVFAPEAQFRIGQCLEKKGDFLGA 106
Query: 109 AEIFLK-VANDDLAPLAVRYAATLQAASILVDTSSYE-----------EISKILQKL--- 153
+ + + + + + A L + +I+ + +
Sbjct: 107 NKAYDRMIQKYPSSSFFEQALERKLAIGNLYLAGEPKRLFNIPMGSGLDIAAQIFESIIR 166
Query: 154 SEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
+ P A LG++ +K K A F L
Sbjct: 167 AAPYGRFAPLAEFQLGLTYIKEKKYTDAIATFNRLID 203
>gi|90423023|ref|YP_531393.1| hypothetical protein RPC_1512 [Rhodopseudomonas palustris BisB18]
gi|90105037|gb|ABD87074.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB18]
Length = 1261
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 4/122 (3%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ + ++ + ++ +A +A+G A + V D +
Sbjct: 678 QQGSFAERQDELINASAKASGEARTMARYELARFYMARGMYAEAKGVIDLVLGDLKSGQD 737
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI 184
A ++AA ++ +E L+ L P+ + A ++A K GK +A+
Sbjct: 738 DPIALIIRAACSVM-IGHPDE---ALKDLGNPAIGANFDAQLWRALAAAKQGKWPEAREK 793
Query: 185 FE 186
+
Sbjct: 794 LK 795
>gi|311895926|dbj|BAJ28334.1| hypothetical protein KSE_25200 [Kitasatospora setae KM-6054]
Length = 675
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 15/134 (11%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L + + +A + +D + + A +L G + A + + + A
Sbjct: 73 AALLAEAGRTAEAADWYGAAADRDVPE----AALRAAELLERDGRFEQAVDWYDRAARAG 128
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS-NPMHQFANEILGISALKFGKV 178
A + A +L ++ + + A +L + G+
Sbjct: 129 DTD------AHCRGAELLGRYGEIAPALHRFEEAARAGHSTARHRAGRLLA----ELGRG 178
Query: 179 QKAKTIFEELAKDN 192
+A FE A D
Sbjct: 179 AEALGWFERAAADG 192
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 34/151 (22%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI--LVAKGDTKNAAEIFLKVANDD 119
L K +A + FE++L + + MY A I + G K A +F
Sbjct: 325 ALSKDGKPFEALAVFERMLK---RGCPANAAMYTALIDSMGKLGREKEAMALFE------ 375
Query: 120 LAPLAVRYAATLQAASILVDTSSYEEISK---ILQKLSEPSNPMHQFANEILGISAL--- 173
++A+ I +D +Y I + E + + + ++A+
Sbjct: 376 ----------RMKASGIELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFYT 425
Query: 174 -------KFGKVQKAKTIFEELAKDNNSPFG 197
K G V +AK +FEE+ P
Sbjct: 426 SLIDGFGKTGMVDQAKELFEEMIAKGFVPDS 456
>gi|71735323|ref|YP_274479.1| TPR domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555876|gb|AAZ35087.1| TPR domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 385
Score = 35.0 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + S KG ++W+ +L+L++ F+ + + + +AQA
Sbjct: 18 LEIDMPRLSTKGLSPQPTTRHRWLIGAAAAAMLALSLAFWWWRLPVQTAPARLSHTYAQA 77
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD--TKNAAEIFLKVAND 118
LE + K AR ++++ D LS+ ++L D + A ++ D
Sbjct: 78 LEQAHDGKPGAARVLYQQLARTD------LSDEQRINLLAELSDYPSPQALKLLDAALGD 131
Query: 119 DLAPLAVRYAA 129
A VR AA
Sbjct: 132 RSA--QVREAA 140
>gi|330508422|ref|YP_004384850.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
gi|328929230|gb|AEB69032.1| TPR-repeat protein [Methanosaeta concilii GP-6]
Length = 208
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSN--MYIASILVAKGDTKNAAEIFLK 114
+ + ++L + D+A + F++ + Y + L +G + A F +
Sbjct: 25 YNKGIDLAEQGRYDEAIAEFDRYIQD----YPDYARAWYNKGVALTQQGKYEEALIAFDR 80
Query: 115 V 115
V
Sbjct: 81 V 81
>gi|258544012|ref|ZP_05704246.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258520741|gb|EEV89600.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 1709
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 18/175 (10%)
Query: 30 LMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD------ 83
L A W + V + + AL + + + + +
Sbjct: 16 LAATIGAQWVEPHSLQDPAARATVAQRISAALGGAADSATIEGILLRAAVQAANLPQGVK 75
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILV----- 138
++ Y + A + +GD A + +A P +++ +A A + +
Sbjct: 76 HEAYGEMLQTLHAELAGVQGDEAAAESLATLIAAQWEEPHSLQDSAARAAVAQQISAALG 135
Query: 139 ---DTSSYEEISKI--LQKLSEPSNPMHQFANEILGI--SALKFGKVQKAKTIFE 186
D ++ E+I +Q + P H+ E+L + L G A+ +
Sbjct: 136 GKADVAAVEDILHRAAMQAAALPQGVQHEAYGEMLQTLRAGLAQGDSAVAQEMLA 190
>gi|242038381|ref|XP_002466585.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
gi|241920439|gb|EER93583.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
Length = 529
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
L + LD+A F+++ + +N L S +A+G A E+F ++ +
Sbjct: 163 LAKAGHLDEAIELFDQMPETNAASWNALV-----SGFMAQGHLAQAQELFERMPIRNNVS 217
Query: 123 -----LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
A +QAA+ L D +++ +S + + A E LGI
Sbjct: 218 WITMISGYAKAGDVQAAANLFDRMDSKDLYAWNAMISCYAQ--NGCAREALGI 268
>gi|90021523|ref|YP_527350.1| cytochrome c biogenesis factor-like protein [Saccharophagus
degradans 2-40]
gi|89951123|gb|ABD81138.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
Length = 418
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 11/204 (5%)
Query: 21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKIL 80
++ P++ L++ + ++ + E A + + D S +
Sbjct: 96 WRSRLPVISLVVAVPVLAIAIYAKQGAMADWEIYEQMGAAQNQSSKEEADKLYQSLLQRT 155
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT 140
++ + S +A++ V KG+ + A F KV P A A L A L
Sbjct: 156 AEAPEN--TQSWYLLATLAVRKGEYEEAVRAFKKVLQQQ--PEAAHVMAELANALFLQAG 211
Query: 141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTI-------FEELAKDNN 193
+S + + + P + A + GI+A + G+ QKA F +
Sbjct: 212 NSITPAVRDYTEQALALEPRNSDALGLAGIAAYQEGEFQKAIDYWQLALGTFHPDSPSTE 271
Query: 194 SPFGISTRSQMILANIIASDQRNK 217
+ ++Q+ L +++ +K
Sbjct: 272 AISQAIAQAQLALELSPKAEKSSK 295
>gi|332667293|ref|YP_004450081.1| hypothetical protein Halhy_5383 [Haliscomenobacter hydrossis DSM
1100]
gi|332336107|gb|AEE53208.1| hypothetical protein Halhy_5383 [Haliscomenobacter hydrossis DSM
1100]
Length = 315
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 137 LVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF 196
L + + YEE + L + P + EI+G +AL+ G A + FE L + + F
Sbjct: 205 LFENAQYEECIQQGN-LVGKNAPNYLSITEIIGQAALQLGDFPLAVSKFEFLIQVQQTGF 263
Query: 197 GISTRSQMILANIIASDQRN 216
++ +++A + + + N
Sbjct: 264 SNRSKGPLLIAYL-GAGKFN 282
>gi|291007025|ref|ZP_06564998.1| putative transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
Length = 923
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 13/139 (9%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK----GDTKNAAEIFLK-- 114
+E + + + R E+ + + + + L GD + A F +
Sbjct: 730 MEHVRAGDIAEGRRCLEQADELAAASFAEFARLGSLTALGEAARRAGDVERARAYFAQAR 789
Query: 115 --VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSN-----PMHQFANEI 167
+A +AP + A A + +D ++ L++ + S P E
Sbjct: 790 ELLAGTPMAPPPLHQVALATEARVDIDELRLDDARARLRESLDSSGEIPMMPTIAMIAEQ 849
Query: 168 LGISALKFGKVQKAKTIFE 186
+ G ++A +
Sbjct: 850 TALLRFAAGDHRQASYLLG 868
>gi|167031572|ref|YP_001666803.1| thioredoxin [Pseudomonas putida GB-1]
gi|166858060|gb|ABY96467.1| thioredoxin [Pseudomonas putida GB-1]
Length = 290
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 10/130 (7%)
Query: 50 KNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAA 109
QA LF ++ +A + + +L +DN L + A L +G+ A
Sbjct: 117 AAPAASPLEQAKALFAESRFAEAEALLQVLLGEDNSNAEAL--ILYARCLAERGELGEAQ 174
Query: 110 EIFLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFAN 165
+ V D+ A L QAAS+ ++ L + + +Q +
Sbjct: 175 VVLDAVKTDEHKAALAGAKAQLTFLRQAASL----PEVADLKSRLAQNPQDDEAAYQLSI 230
Query: 166 EILGISALKF 175
+ L +
Sbjct: 231 QQLARQQYEA 240
>gi|90421048|ref|ZP_01228951.1| thioredoxin [Aurantimonas manganoxydans SI85-9A1]
gi|90334683|gb|EAS48460.1| thioredoxin [Aurantimonas manganoxydans SI85-9A1]
Length = 354
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 11/167 (6%)
Query: 43 DGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAK 102
G + V + QA +L A F +L + + A +A
Sbjct: 169 KGQGGGGNDPVAQAMEQANQLLADGDAGGAAQIFGAVLQHEPGHAGATGGL--AECYLAT 226
Query: 103 GDTKNAAEI---FLKVANDDLAPLAVRYA-ATLQAASILVDTSSYEEISKILQKLSEPSN 158
GD A + + AV L+ A + + + ++ S+
Sbjct: 227 GDAARAKALIDQYDAAGEGTTEDPAVEAVRTKLKLAEEIAQLGDPVLLQQRIE-----SD 281
Query: 159 PMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMI 205
P A L + A G Q A E+ + + S + R++++
Sbjct: 282 PDDHRARYDLALIAQAKGDRQTAAGHLLEIIRRDRSFDDDAARTKLL 328
>gi|300865047|ref|ZP_07109874.1| putative Calcium/calmodulin-dependent protein kinase [Oscillatoria
sp. PCC 6506]
gi|300336984|emb|CBN55024.1| putative Calcium/calmodulin-dependent protein kinase [Oscillatoria
sp. PCC 6506]
Length = 1081
Score = 35.0 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 62 ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDL 120
L K +DA ++F+K L + Y + IA + + D A F +A +
Sbjct: 972 ALMQLQKYEDAIAAFDKALKINPNDYPSWGSRGIALTKLQRYD--EALAAFDKAIAINSN 1029
Query: 121 APLAVRYAA 129
PLA A
Sbjct: 1030 DPLAWANRA 1038
>gi|326774336|ref|ZP_08233601.1| hypothetical protein SACT1_0097 [Streptomyces cf. griseus
XylebKG-1]
gi|326654669|gb|EGE39515.1| hypothetical protein SACT1_0097 [Streptomyces cf. griseus
XylebKG-1]
Length = 707
Score = 35.0 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL 120
+EL ++++ D+A + +I L M A + AA ++ + D
Sbjct: 578 VELLDTHENDEAAAVLGRIGQAAAPALPRLRKMMAAGYEWTR--VYAAAALWD-IGGDAE 634
Query: 121 APLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
AP TL A D ++ + L ++ + P E L +
Sbjct: 635 APAV---VETLLTAWAEND-ATSNHVLACLNRMGPAARPALPRVREELTL 680
>gi|239908573|ref|YP_002955315.1| hypothetical protein DMR_39380 [Desulfovibrio magneticus RS-1]
gi|239798440|dbj|BAH77429.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 484
Score = 35.0 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 8/130 (6%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAV 125
+ + + A++ F + D + +A + G T +V + A + V
Sbjct: 106 AGQPEAAKARFAAMGKADPGNLR--GRLGLALCALQAGRTAEGLAGLAQVQQAESADVLV 163
Query: 126 RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQ-KAKTI 184
R L +D + + EP N A E+LG+ + GK A
Sbjct: 164 RVLCGL--VYWNLDAPANARLELEAALELEPRNT---AALELLGLVYRRQGKADLAASAW 218
Query: 185 FEELAKDNNS 194
+ L D N+
Sbjct: 219 GQALGLDPNA 228
>gi|107103325|ref|ZP_01367243.1| hypothetical protein PaerPA_01004394 [Pseudomonas aeruginosa PACS2]
gi|116051830|ref|YP_789327.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218889911|ref|YP_002438775.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
LESB58]
gi|254236709|ref|ZP_04930032.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
C3719]
gi|254242496|ref|ZP_04935818.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
2192]
gi|296387680|ref|ZP_06877155.1| type IV pilus biogenesis protein PilF [Pseudomonas aeruginosa PAb1]
gi|313109223|ref|ZP_07795191.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
39016]
gi|115587051|gb|ABJ13066.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168640|gb|EAZ54151.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
C3719]
gi|126195874|gb|EAZ59937.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
2192]
gi|218770134|emb|CAW25896.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
LESB58]
gi|310881693|gb|EFQ40287.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
39016]
Length = 252
Score = 35.0 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 13/169 (7%)
Query: 25 APLLILMILSLAIWFYLFDG---SHEKKKNIVGENFAQ-ALELFNSNKLDDARSSFEKIL 80
A L+ L+ + L D +K ++ + + Q L + A+ K L
Sbjct: 5 AALVFLLAVGLTGCVTSGDQNPLKTDKGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKAL 64
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPLAVRYAATLQAASILVD 139
D + + + A + + + K A E + +A+D + L +
Sbjct: 65 EIDPSSADAHAAL--AVVFQTEMEPKLADEEYRKALASDSRNARVLNNY-----GGFLYE 117
Query: 140 TSSYEEISKILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIFEE 187
YEE + L + S+ + P E LG+ +L+ K +AK FE+
Sbjct: 118 QKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEK 166
>gi|298486817|ref|ZP_07004873.1| TPR domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298158684|gb|EFH99748.1| TPR domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 385
Score = 35.0 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 1 MESNNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQA 60
+E + S KG ++W+ +L+L++ F+ + + + +AQA
Sbjct: 18 LEIDMPRLSTKGLSPQPTTRHRWLIGAAAAAMLALSLAFWWWRLPVQTAPARLSHTYAQA 77
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGD--TKNAAEIFLKVAND 118
LE + K AR ++++ D LS+ ++L D + A ++ D
Sbjct: 78 LEQAHDGKPGAARVLYQQLARTD------LSDEQRINLLAELSDYPSPQALKLLDAALGD 131
Query: 119 DLA 121
A
Sbjct: 132 RSA 134
>gi|332299345|ref|YP_004441266.1| hypothetical protein Poras_0144 [Porphyromonas asaccharolytica DSM
20707]
gi|332176408|gb|AEE12098.1| hypothetical protein Poras_0144 [Porphyromonas asaccharolytica DSM
20707]
Length = 593
Score = 35.0 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 15/115 (13%)
Query: 16 MGKCCYKWIAPLLILMILSLAIWFYLFD---------GSHEKKKNIVGENFAQAL-ELFN 65
+ + + ++L+I ++ + H+K+ + E QA+ +L
Sbjct: 447 WSRAGWAYWLLYVLLLIGGGVAYWLIRSDQRLRADHVAYHKKRSTPMAEQQIQAIRQLIK 506
Query: 66 SNKLDDARSSFEK-----ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKV 115
+ + +A + + + L+ +AS L +G +L +
Sbjct: 507 AGQQSEATARLYAAITHYLQDHYALATSSLTRQQLASALKQQGVADAEVNAWLSL 561
>gi|300704813|ref|YP_003746416.1| thioredoxin [Ralstonia solanacearum CFBP2957]
gi|299072477|emb|CBJ43827.1| Putative thioredoxin [Ralstonia solanacearum CFBP2957]
Length = 280
Score = 35.0 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 52/157 (33%), Gaps = 12/157 (7%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ + L +N++ AR +F+ L+ D + + +L+ GD + A
Sbjct: 108 QPAEVAYREGLTAHQANEIAHAREAFQNALAYDPGF--DAARFALIDLLLDIGDVRAAQS 165
Query: 111 IFLKVANDDLAPLAVRYA---ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
F ++ AP R+A L+AA E + + + + A
Sbjct: 166 EFALLS--PKAPQDERHAPLQTRLKAAEHAGALPDAEALRQRIAAAPDDLQ-----ARLD 218
Query: 168 LGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
L + + A + + + + R M
Sbjct: 219 LAQQYIARQDYEDALEQLLAIVERDRAFRDDIGRKTM 255
>gi|226508942|ref|NP_001142930.1| hypothetical protein LOC100275367 [Zea mays]
gi|195611586|gb|ACG27623.1| hypothetical protein [Zea mays]
Length = 220
Score = 35.0 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL 90
A LF KLD+A ++FE++ +D Y PL
Sbjct: 129 RLLAAQVLFVDGKLDEAIAAFEELAREDPADYRPL 163
>gi|162451866|ref|YP_001614233.1| hypothetical protein sce3593 [Sorangium cellulosum 'So ce 56']
gi|161162448|emb|CAN93753.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 430
Score = 35.0 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
LD A +SF+++ + D K Y L+ + A + +AKGDT A E+ AP
Sbjct: 309 KGDLDGALASFKELEAIDMKGYKELALYHQARLHLAKGDTDKAKELLKSAHEKLQAPSP 367
>gi|240080167|ref|ZP_04724710.1| IgA-specific metalloendopeptidase [Neisseria gonorrhoeae FA19]
gi|268596318|ref|ZP_06130485.1| protease Ig A [Neisseria gonorrhoeae FA19]
gi|268550106|gb|EEZ45125.1| protease Ig A [Neisseria gonorrhoeae FA19]
Length = 1593
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 49/157 (31%), Gaps = 5/157 (3%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ N E Q + K A + + + A + + A
Sbjct: 1021 QANQAEEALRQQAK-AEQVKRQQAEAGRKSAELSAKQRAGEEERRQTAQSQPQRRKRRAA 1079
Query: 109 AEIFLKVANDDLAPLAVRYAAT--LQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
+ ++ V+ D R ++ A + + ++ + +L + E
Sbjct: 1080 PQDYMAVSQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKAAELLAKQRA--EAERE 1137
Query: 167 ILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQ 203
++A + + ++AK ELA + + ++
Sbjct: 1138 AQALAARRKAEAEEAKHQAAELAHRQEAKRKAAESAK 1174
>gi|326444953|ref|ZP_08219687.1| hypothetical protein SclaA2_27980 [Streptomyces clavuligerus ATCC
27064]
Length = 922
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 23/176 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKGDTKNAAEIFL 113
A + + ++A E++L+ + L+ +A+ G T+ A E+
Sbjct: 575 AASYQQAGRTEEAIELLEQVLTARERVLGPNHRDTLTTRTNLAASYQQAGRTEEAIELLE 634
Query: 114 KV--ANDDLAPLAVRYAATLQ---------AASILVDTSSYEEISKILQKLSEPSNPMHQ 162
+V A++ + T + A E++ +++ P++P
Sbjct: 635 QVLTASERVLGPNHPDTLTTRTNLAASYQQAGRTEEAIELLEQVLTASERVLGPNHPDTL 694
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMILANIIAS 212
A L S + G+ ++A + E++ + P ++TR + ++ A
Sbjct: 695 TARGNLAASYQQAGRTEEAIELEEQVLTARDRILGPDHPNTLTTRGNLAFSHWQAG 750
>gi|158521101|ref|YP_001528971.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 808
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 52/167 (31%), Gaps = 39/167 (23%)
Query: 57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPL-----------------SNMYIAS-- 97
F +A+ L + L+ A + + +L ++ + L + A
Sbjct: 10 FNKAVALHRAGSLEGAETLYRDLLRENPNHADALHLLGTIMAAKKDLVAAEGTLRKAVEK 69
Query: 98 -------------ILVAKGDTKNAAEIFL-KVANDDLAPLAVRYAATLQAASILVDTSSY 143
+L+ KG T AA F V+ D A + A+ D +
Sbjct: 70 APKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEA-- 127
Query: 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190
K + + P H A LG + G A FE + K
Sbjct: 128 ----KTFFEKTLNLAPHHLAARNNLGNLLQQAGDNDGALACFEAVLK 170
>gi|113866405|ref|YP_724894.1| O-linked N-acetylglucosamine transferase OGT [Ralstonia eutropha
H16]
gi|113525181|emb|CAJ91526.1| O-linked N-acetylglucosamine transferase OGT [Ralstonia eutropha
H16]
Length = 651
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
+L+ + + + + +++ + ++ Y+A I + D A ++ +
Sbjct: 356 LTSLQAKSYGEAEQYLKEYLQLVEKQPTANPDIAYQYLAQIAEERKDYAGAIRWLDRIED 415
Query: 118 DDLAPLAVRYAATLQAASILVDTSS--YEEISKILQKLSEPSN-PMHQFA-NEILGISAL 173
LAP A A L A +D + + E+ + +S+P A + + +
Sbjct: 416 IRLAPAATAKRAQLLARMGKLDDAQALFGEMLTDAEDISDPGQRAQRMTAIRQAEVATLM 475
Query: 174 KFGKVQKAKTIF-EELAKDNN 193
+ +A+ + + + + +
Sbjct: 476 ESKAYDRARKLLNDRITAEPD 496
>gi|327353979|gb|EGE82836.1| hypothetical protein BDDG_05780 [Ajellomyces dermatitidis ATCC
18188]
Length = 316
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 27/103 (26%), Gaps = 4/103 (3%)
Query: 62 ELFNSNKLD-DARSSFEKILSQDNKLYNP-LSNMYIASILVAKGDTKNAAEIFLKVANDD 119
L + NK + DA E ++ + A GD A + V
Sbjct: 110 SLVDENKKELDALQKEEDDAAEAAGDTEVQAARGKRAEFWARVGDRDKAVAAYEAVLEKT 169
Query: 120 LAPLAVRY--AATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
A ++ D + ++ + L E
Sbjct: 170 GILGTKIDLILAIIRIGLFFGDKAFVKKQVERASALVESGGDW 212
>gi|300112860|ref|YP_003759435.1| tol-pal system protein YbgF [Nitrosococcus watsonii C-113]
gi|299538797|gb|ADJ27114.1| tol-pal system protein YbgF [Nitrosococcus watsonii C-113]
Length = 255
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 4/117 (3%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKL-YNPLSNMYIASILVAKGDTKNAAEIFL 113
+ + AL L ++A ++F++ L Q Y P + ++ GD +A F
Sbjct: 131 QAYQVALGLLKEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYMLGDFNDAVGTFQ 190
Query: 114 KVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEIL 168
+ V A L+ + + +E+ Q + P++ + A E L
Sbjct: 191 ALVEQYPESAKVPD-AMLKQGLAYYELAQWEQAKAQFQAVMTRYPASTASRLAEERL 246
>gi|196228638|ref|ZP_03127504.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196226919|gb|EDY21423.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 122
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 49 KKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNA 108
+ + V + +++ N+ K D+A ++F++ + D + + + A++ KGD K A
Sbjct: 52 RISHVADAYSRGEFCMNAGKDDEAIAAFQEAVKIDPTFTDAWARL--AALYEKKGDNKKA 109
Query: 109 AEIF 112
+ F
Sbjct: 110 IDAF 113
>gi|194335812|ref|YP_002017606.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194308289|gb|ACF42989.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 577
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Query: 93 MYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQK 152
AS+ AKGD + A E + K+ +D + A+ Y L A + + +
Sbjct: 60 FVAASLKSAKGDYREAVERYRKLLHDQPSNAAIHY--ALSKAWVALGVPDSARLYSEKSV 117
Query: 153 LSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQMILA 207
L P N + L + + +A ++ +LA D S +++ + LA
Sbjct: 118 LLNPRNKYYTA---FLAFLSHQMHDYGRAAELYRQLAVLDPGSTEPLTSLALEYLA 170
>gi|226496595|ref|NP_001146253.1| hypothetical protein LOC100279827 [Zea mays]
gi|219886401|gb|ACL53575.1| unknown [Zea mays]
Length = 666
Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 64 FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL 123
+ +L DA +++L+ +P + + V GD A E++ ++ D +
Sbjct: 187 ADHGRLADAVKLKDEMLTSGFVGPDPKVYSLLMAGFVGAGDGAKALELYQEL-KDKVGGE 245
Query: 124 AVRY---AATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFAN------EILGISALK 174
+ TL A L+ T E++ + +++ + + A + LG +
Sbjct: 246 PILDGIVYGTLMKAYFLMGTG--EKVMECYKEVLCVESAVRFGAESYNEVVDALG----Q 299
Query: 175 FGKVQKAKTIFEELAKDNNSPFGIS---TRSQMILANIIASDQ 214
G+++ A +F+ + +++++P I+ ++++ A+ +
Sbjct: 300 NGRLEDALKLFDRMLEEHDTPLRIAVDLRSFRVMVDTYCAAGR 342
>gi|330953131|gb|EGH53391.1| thioredoxin [Pseudomonas syringae Cit 7]
Length = 290
Score = 34.6 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQTLFAESRFAEAEAQLKVLLGEDNTNGAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + + Q A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDAAELKSRLAQNPQDDEAALQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|228472923|ref|ZP_04057680.1| putative tetratricopeptide TPR_2 repeat protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228275505|gb|EEK14282.1| putative tetratricopeptide TPR_2 repeat protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 420
Score = 34.6 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 96 ASILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
A + V +G+ + A + F + P + A + L D + +E + + L
Sbjct: 231 AYLYVEQGNKEEALKAFAFARKNYPKDPELIIQEANVH--YQLGDHAKFESLMREAADL- 287
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
+P NP Q+ +G+ +L+ GK +A+ F++
Sbjct: 288 QPENPYVQY---NIGVMSLQQGKPAEARKFFQK 317
>gi|1679748|gb|AAB62979.1| Tgl protein [Myxococcus xanthus]
Length = 241
Score = 34.6 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 5/119 (4%)
Query: 67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR 126
+ D+A + K L + +A++ + +G +A +++ V ND L P
Sbjct: 81 RRPDEAVKHYTKALEVRPDF--SEARTNLANVHLDQGRYDDAIKLYELVLNDMLYPTPF- 137
Query: 127 YAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
A + + ++ + +NP + LG+ + G+ +A F
Sbjct: 138 -IAQGNLGWAYYKKGEPDRAVESIKA-AVTTNPNFCLGYKNLGLIYDETGRTSEACRQF 194
>gi|167753467|ref|ZP_02425594.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216]
gi|167658092|gb|EDS02222.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216]
Length = 995
Score = 34.6 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 91 SNMYIASILVAKGDTKNAAEIFLKVAND----DLAPLAVRYAATLQAASILVDTSSYEEI 146
S A IL +GD A +I+ ++ + + A A R +++A DT+ E++
Sbjct: 874 SQFAKAGILDRRGDAAAAQKIYKVLSANVKTSEGAESAYR---VIESAFRAGDTARAEKL 930
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFG 197
P + +LG ++ G + +A+ ++ + D +P
Sbjct: 931 VLDFSDKGTPHAFWLAKSFLVLGDIYVQKGDMFQARATYQSIV-DGYTPAD 980
>gi|156543124|ref|XP_001605583.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Nasonia
vitripennis]
Length = 1215
Score = 34.6 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLA- 121
L NK+D A + F +L+Q L + A I K D + A + KV +
Sbjct: 139 LLEGNKIDQADAQFNFVLNQSPNNIPSL--LGKACIAYNKKDYRGALTFYRKVLRINPQC 196
Query: 122 PLAVR 126
P VR
Sbjct: 197 PADVR 201
>gi|319441104|ref|ZP_07990260.1| hypothetical protein CvarD4_04977 [Corynebacterium variabile DSM
44702]
Length = 303
Score = 34.6 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 22/195 (11%)
Query: 24 IAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD 83
+ +L+LA L + + F A+ + KL S+ E ++
Sbjct: 120 FGVQSVPTVLALAAGRPLTSFEGVQPPEQT-DRFISAVLQATAGKLPGLPSTGEPAGDEE 178
Query: 84 NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPL-AVRYAATLQAASILVD--- 139
+ A+ + + D A ++ V +D AP AV A +A ++L+
Sbjct: 179 SPADP---RFTEAAEALDREDYVGAVALYDAVIDDVGAPAEAVSEAKAARATAVLLGRSA 235
Query: 140 TSSYEEISKIL------QKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
S ++I ++L + + M A + + + + D
Sbjct: 236 DGSADDIDRMLLEGRRREAFDVLIDRMRTSAGD--------EKDAARTRLLGLFSLYDPA 287
Query: 194 SPFGISTRSQMILAN 208
P I R++M A
Sbjct: 288 DPEVIDARTRMASAL 302
>gi|221484482|gb|EEE22778.1| selective LIM-binding factor, putative [Toxoplasma gondii GT1]
Length = 1518
Score = 34.6 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 22/185 (11%)
Query: 15 KMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARS 74
+M + KW + + + + + G A ++ N L +
Sbjct: 925 EMYRQLRKWSDAVRVARAEGKEAYKEVVKHLARQLVAEKGTA--AACQVLVQNDLAEDAV 982
Query: 75 SFE----------KILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+I + K N+ A++ KGD +A F+ A
Sbjct: 983 ELALDAGDFSLSLQIAEESAKHMLDTVNLRQAAVSEEKGDFSSAERHFVLAGKASEAIEM 1042
Query: 125 VRYA----ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQK 180
R+ + ++ AS + E + + L+ E + ++ G+
Sbjct: 1043 YRHLKDWKSAIRVASAHAPDAVPEILVSQARALANEGG-----MKEAEAL-YVEAGRADL 1096
Query: 181 AKTIF 185
A ++
Sbjct: 1097 AVAMY 1101
>gi|108763410|ref|YP_633797.1| putative batE protein [Myxococcus xanthus DK 1622]
gi|108467290|gb|ABF92475.1| putative batE protein [Myxococcus xanthus DK 1622]
Length = 236
Score = 34.6 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ F +A E + A+ +EK+L+ + L N+ + +A+GD A
Sbjct: 8 EEAQDIFLKANEAYAQEDYAAAKEGYEKLLANGQGGPDVLYNL--GTTHLAQGDVGRAVL 65
Query: 111 IFLKVANDDL-APLAVRYAATLQA 133
+ + AP + +A
Sbjct: 66 ALEQARKEGGQAPDLEANLSVARA 89
>gi|323170214|gb|EFZ55867.1| hypothetical protein ECLT68_5102 [Escherichia coli LT-68]
Length = 103
Score = 34.6 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 4 NNDANSYKGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALEL 63
N + K + K +A +IL + +L W Y + ++ + A+
Sbjct: 6 NENDQVEAVKRFFAENG-KALAVGVILGVGALIGWRYWNSHQVDSARS-ASLAYQNAVTA 63
Query: 64 FNSNKLDDARSSFEKILSQD 83
+ K D ++ EK +++
Sbjct: 64 VSEGKPDSIPAA-EKFAAEN 82
>gi|320095709|ref|ZP_08027363.1| hypothetical protein HMPREF9005_1975 [Actinomyces sp. oral taxon 178
str. F0338]
gi|319977359|gb|EFW09048.1| hypothetical protein HMPREF9005_1975 [Actinomyces sp. oral taxon 178
str. F0338]
Length = 1120
Score = 34.6 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 63/170 (37%), Gaps = 23/170 (13%)
Query: 66 SNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKGDTKNAAEIFLKVANDD 119
+ +L +A +E++L+ + L+ +A + G A ++ +VA D
Sbjct: 931 AGRLGEAIPLYEQVLTDRRRVLGKNHPDTLASRGNLAGAYESAGRLGEAIPLYEQVAADS 990
Query: 120 LA------PLAVRYAATLQAASILVDTSS-----YEEISKILQKLSEPSNPMHQFANEIL 168
P + L A YE+++ ++ +P + L
Sbjct: 991 ARVLGKNHPDTLASRGNLAGAYESAGRLGEAIPLYEQVAADSARVLGDDHPQTLTSRNNL 1050
Query: 169 GISALKFGKVQKAKTIFEELAKD------NNSPFGISTRSQMILANIIAS 212
+ G++ A T++E+ D ++ P +++RS + A + A
Sbjct: 1051 AYAYKSAGRLDDAITLYEKTLADRVRVLGDDHPQTLTSRSNLAYAYLAAG 1100
>gi|16127358|ref|NP_421922.1| TPR domain-containing protein [Caulobacter crescentus CB15]
gi|221236164|ref|YP_002518601.1| tetratricopeptide repeat family protein [Caulobacter crescentus
NA1000]
gi|13424790|gb|AAK25090.1| TPR domain protein [Caulobacter crescentus CB15]
gi|220965337|gb|ACL96693.1| tetratricopeptide repeat family protein [Caulobacter crescentus
NA1000]
Length = 673
Score = 34.6 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 60 ALELFNSNKLDDARSSFEKILSQD--NKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
A L+ NK +A + E+++++D + Y L A+IL G+ A ++ +V
Sbjct: 220 ATMLYRQNKNLEALAQIEQLVAKDARHPGYANL----YAAILARLGEYDRAIAVYGQVLA 275
Query: 118 D 118
D
Sbjct: 276 D 276
>gi|238481201|ref|NP_001154694.1| nucleobase:cation symporter [Arabidopsis thaliana]
gi|332003244|gb|AED90627.1| nucleobase:cation symporter-1, NCS1 family [Arabidopsis thaliana]
Length = 363
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 62/158 (39%), Gaps = 10/158 (6%)
Query: 41 LFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV 100
E N + F L + +A F +I N++ + +++ I
Sbjct: 188 FHKMRTEGFTNEAVKMFDA---LSKDGRTHEALELFSQI-KDKNRMPDVVAHTAIVEAYA 243
Query: 101 AKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
G K ++F+++ ++P A Y+ ++ + D ++++ K L ++ N M
Sbjct: 244 NAGQAKETLKVFMRMLASGVSPNAYTYSVLIK--GLAADGKTHKDAKKYLLEMM--GNGM 299
Query: 161 HQFANEILGI--SALKFGKVQKAKTIFEELAKDNNSPF 196
A + + ++ GK + A+ + +E+ P
Sbjct: 300 SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
>gi|197247524|ref|YP_002146478.1| malto-oligosyltrehalose synthase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197211227|gb|ACH48624.1| malto-oligosyltrehalose synthase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 842
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 82 QDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTS 141
Y ++++ A +LV G N + + V AP+ +R A L+AA +L+
Sbjct: 295 SGTTGYEFIASL--AEVLVDDGQIDNLRQAYETV---TGAPVDMR--AELRAAKLLMVDR 347
Query: 142 SYEEISKILQKLSEPSNPMHQFANE 166
++E L L+ Q A E
Sbjct: 348 NFEGEFTRLLALALSIASELQIAQE 372
>gi|153005231|ref|YP_001379556.1| protein-glutamate O-methyltransferase [Anaeromyxobacter sp.
Fw109-5]
gi|152028804|gb|ABS26572.1| Protein-glutamate O-methyltransferase [Anaeromyxobacter sp.
Fw109-5]
Length = 513
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 13/139 (9%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
G A ALEL + DA ++ + + + A +L + GD + A +
Sbjct: 345 EDGARVALALELLRRERFADALAALGGRAP--AGGEDVDALLLRAVLLTSSGDLEGAEGV 402
Query: 112 FLKVANDDLAPLA---VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
++ D +R A D ++ + + + +P L
Sbjct: 403 CARILERDELNAEAHYLRALCREHAG----DLAAAAD----HDRYALYLDPTFAMPRLHL 454
Query: 169 GISALKFGKVQKAKTIFEE 187
G+ A + G ++ A+
Sbjct: 455 GLLAKRGGDLEAARRELSR 473
>gi|54297970|ref|YP_124339.1| hypothetical protein lpp2025 [Legionella pneumophila str. Paris]
gi|53751755|emb|CAH13177.1| hypothetical protein lpp2025 [Legionella pneumophila str. Paris]
Length = 322
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 48 KKKNIVGEN--FAQALELFNSNKLDDARSSFEKILSQDN-KLYNPLSNMYIASILVAKGD 104
+ N E + A EL + + D+A S + + + Y + ++ + + K D
Sbjct: 192 SRANPADEQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVKKD 251
Query: 105 TKNAAEIFLKVANDDLAPLAVRYAAT-LQAASILVDTSSYEEISKILQKL--SEPSNPMH 161
A E F V P + + AA+ L++ + +E K Q++ + P P
Sbjct: 252 YSKAIEHFEIVLQQ--YPSSSKAAASLLKSGYAYAEKGDKQEAKKRFQQVVKTYPDTPTA 309
Query: 162 QFA 164
Q A
Sbjct: 310 QLA 312
>gi|34540769|ref|NP_905248.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
gi|34397083|gb|AAQ66147.1| TPR domain protein [Porphyromonas gingivalis W83]
Length = 448
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 52/159 (32%), Gaps = 19/159 (11%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E A L + + +D +I D + YN + M GD + A F K
Sbjct: 242 ELLYSATLLESPAQKEDIYKVATQIYPDDYRAYNNIGMMRY-----RSGDLEGARTWFQK 296
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALK 174
A+ + ++ + E+ + + E LG+ L+
Sbjct: 297 AASVKPNAETDMNL-----GLLALNEGNVEQAKQYFGSAANV-----PELGEALGLLYLQ 346
Query: 175 FGKVQKAKTIFEELAKDNNSPFGIS----TRSQMILANI 209
G +A F + +N + I R+Q IL I
Sbjct: 347 EGNYAQAVAAFGKTESNNAAVANILNRDYNRAQEILNGI 385
>gi|298705959|emb|CBJ29080.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 692
Score = 34.6 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 51 NIVGENFAQALEL-FNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILV--AKGDTKN 107
N F A++ ++ + ++A + + + P+ Y ++ + G +
Sbjct: 446 NRSESTFVVAMKACGDAGRWEEALAVMDDMRRD---GIPPMETTYTTAMKACGSVGKWEQ 502
Query: 108 AAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
A ++F ++ + +AP Y A ++A + D + S +LQ S P + +
Sbjct: 503 ALKLFDEMKDIGIAPTEQCYTAAIRACA-KADKAEKAS-SLLLQMCSAPGVSTNMSSFRA 560
Query: 168 LGISALKFGKVQKAKTIFE 186
+ + G A + E
Sbjct: 561 AMDAYCRAGDWASALRLLE 579
>gi|241758627|ref|ZP_04756741.1| tetratricopeptide repeat-containing domain protein [Neisseria
flavescens SK114]
gi|241321138|gb|EER57334.1| tetratricopeptide repeat-containing domain protein [Neisseria
flavescens SK114]
Length = 209
Score = 34.6 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 8/175 (4%)
Query: 18 KCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFE 77
K +K I + +++ ++ + + +K + E A ++ + + +
Sbjct: 15 KYFWKSIGRWIFTLLIVASLGYLGYTIYQGQKASKDQEAAAVLAQMVEKAQQKTDQKAIN 74
Query: 78 KILSQDNKLYN-----PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132
L++ K Y + + +A+ G A V + APL + A +
Sbjct: 75 ADLAELQKNYPDSISTAQATLMVAATEFDAGRYDVAEGHLNWVLKNQNAPLV-QALAAQR 133
Query: 133 AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEE 187
L+ Y+ L E E G + K ++A +E
Sbjct: 134 LGVTLLQQKKYDAAINALNTQVEAD--FEPLMLETKGDVYVAQNKTKEAVQSYEA 186
>gi|261198200|ref|XP_002625502.1| proteasome regulatory particle subunit [Ajellomyces dermatitidis
SLH14081]
gi|239595465|gb|EEQ78046.1| proteasome regulatory particle subunit [Ajellomyces dermatitidis
SLH14081]
gi|239615688|gb|EEQ92675.1| proteasome regulatory particle [Ajellomyces dermatitidis ER-3]
Length = 493
Score = 34.6 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 27/103 (26%), Gaps = 4/103 (3%)
Query: 62 ELFNSNKLD-DARSSFEKILSQDNKLYNP-LSNMYIASILVAKGDTKNAAEIFLKVANDD 119
L + NK + DA E ++ + A GD A + V
Sbjct: 110 SLVDENKKELDALQKEEDDAAEAAGDTEVQAARGKRAEFWARVGDRDKAVAAYEAVLEKT 169
Query: 120 LAPLAVRY--AATLQAASILVDTSSYEEISKILQKLSEPSNPM 160
A ++ D + ++ + L E
Sbjct: 170 GILGTKIDLILAIIRIGLFFGDKAFVKKQVERASALVESGGDW 212
>gi|220924339|ref|YP_002499641.1| HemY domain-containing protein [Methylobacterium nodulans ORS 2060]
gi|219948946|gb|ACL59338.1| HemY domain protein [Methylobacterium nodulans ORS 2060]
Length = 507
Score = 34.6 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 15/152 (9%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
A ALEL + + A + + + L + + + D K AA +
Sbjct: 233 ASALEL-EAGDPERALAQAREAVKLAPDLVPAAA--VAGRLFARRADLKRAARVVEAAWK 289
Query: 118 DDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK 177
P R L+ D + E L + H + + +AL+ +
Sbjct: 290 ASPHPDLARVYLDLRPGDSSRDRLARAETLARL-------SSWHPESRFAIARAALEARE 342
Query: 178 VQKAKTIFEELAKDNNSPFGISTRSQMILANI 209
+A+ + L DN + R +++A I
Sbjct: 343 FGRARDVLSPLLADNPT-----QRVYLMMAEI 369
>gi|257487200|ref|ZP_05641241.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289649061|ref|ZP_06480404.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298486021|ref|ZP_07004095.1| Tfp pilus assembly protein PilF [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298159498|gb|EFI00545.1| Tfp pilus assembly protein PilF [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330894492|gb|EGH27153.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
syringae pv. mori str. 301020]
gi|331009184|gb|EGH89240.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 252
Score = 34.6 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 9/160 (5%)
Query: 48 KKKNIVGENFAQ-ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ + + Q L F + + A+ +K L D+ + + A + + + +
Sbjct: 31 QGREEARRAYVQLGLGYFQQGQTERAKVPLKKALELDSSDAQANAAL--ALVFQTEMEPE 88
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS-NPMHQFAN 165
A + F K + S L + Y+E + ++ + + P
Sbjct: 89 LAEQYFRKALASSNNETRIVN----NYGSFLFEQKRYKEAYERFEQAAADNLYPERSRVF 144
Query: 166 EILGISALKFGKVQKAKTIF-EELAKDNNSPFGISTRSQM 204
E LG+++LK G ++A+ F + L D P + +Q+
Sbjct: 145 ESLGMTSLKLGNREQAREHFTKALRLDRQLPRSLLEMAQI 184
>gi|332162581|ref|YP_004299158.1| hypothetical protein YE105_C2961 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606681|emb|CBY28179.1| exported zinc metalloprotease YfgC precursor [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325666811|gb|ADZ43455.1| hypothetical protein YE105_C2961 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863270|emb|CBX73395.1| repeat-containing protein YPO3069/y1412/YP_2691 [Yersinia
enterocolitica W22703]
Length = 508
Score = 34.6 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 48 KKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKN 107
+ + + QA+ L+ + K D+AR+ + +L+Q L M I + + +
Sbjct: 324 TTREQLAAKYGQAILLYQAKKYDEARNQLQPLLTQQPGNVWFLDLM--TDIDLGQNKAAS 381
Query: 108 AAEIFLKV-ANDDLAPLAVRYAA 129
A A + P+ + A
Sbjct: 382 AISRLQAATAKQNNDPVLLLNLA 404
>gi|260826650|ref|XP_002608278.1| hypothetical protein BRAFLDRAFT_115079 [Branchiostoma floridae]
gi|229293629|gb|EEN64288.1| hypothetical protein BRAFLDRAFT_115079 [Branchiostoma floridae]
Length = 573
Score = 34.6 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 68 KLDDARSSFEKIL---SQDNKLYNPLSNMYIASIL--VAKGDTKNAAEIFLKVANDDLAP 122
++ A + + +++ L+ + AS + G + A EI ++ + P
Sbjct: 418 NIEGAAEVLDTTVNWYKENHPSSPYLAQLMRASSQFKLRHGQAQKATEILEELR--SMYP 475
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISAL 173
V+ A L +A D E+ISK L L + E L +A+
Sbjct: 476 DDVKTIAQLISAYSQCDPKKGEQISKELPPL--DPSFFSGLDIEALEKAAM 524
>gi|220910314|ref|YP_002485625.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
7425]
gi|219866925|gb|ACL47264.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 155
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 39 FYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI 98
L+ E+K ++ +L +++A+ +++ + + A +
Sbjct: 26 QRLWQLWFEQKGAYSLALILRSQDLLEQGDVEEAKEILTELVEEQPDFAE--AWNRRAVL 83
Query: 99 LVAKGDTKNAAEIFLKV 115
+GD + A +V
Sbjct: 84 YYTQGDYRRAIADCEQV 100
>gi|90023206|ref|YP_529033.1| coenzyme A biosynthesis protein [Saccharophagus degradans 2-40]
gi|89952806|gb|ABD82821.1| Tetratricopeptide region [Saccharophagus degradans 2-40]
Length = 957
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 15/171 (8%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMY-----IASILVAKGDTK 106
+ + ++ L + D+A + ++ Y S +A I
Sbjct: 646 AISAQYDASVYLMELKRWDEAENVLTTFKTR----YPTNSLSRDIPAKLAFIYQESEQWD 701
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
AA + K+A+D+ P +R + +A + + + + + + A E
Sbjct: 702 KAAAVLAKMASDESDPE-LRRQSRYLSAELYEKSGRPAKAIEQYRDYAHNYPQPFGLATE 760
Query: 167 I---LGISALKFGKVQKAKTIFEE-LAKDNNSPFGISTRSQMILANIIASD 213
L + G K + +E +A++ + + RS LA + AS+
Sbjct: 761 ARYKLVTLYEQAGDSSKRRFWLKELIAENKKAGDSKTARSN-YLAAMAASE 810
>gi|71735889|ref|YP_273576.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556442|gb|AAZ35653.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322923|gb|EFW79013.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329954|gb|EFW85942.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330874706|gb|EGH08855.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 252
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 62/160 (38%), Gaps = 9/160 (5%)
Query: 48 KKKNIVGENFAQ-ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+ + + + Q L F + + A+ +K L D+ + + A + + + +
Sbjct: 31 QGREEARKAYVQLGLGYFQQGQTERAKVPLKKALELDSSDAQANAAL--ALVFQTEMEPE 88
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPS-NPMHQFAN 165
A + F K + S L + Y+E + ++ + + P
Sbjct: 89 LAEQYFRKALASSNNETRIVN----NYGSFLFEQKRYKEAYERFEQAAADNLYPERSRVF 144
Query: 166 EILGISALKFGKVQKAKTIF-EELAKDNNSPFGISTRSQM 204
E LG+++LK G ++A+ F + L D P + +Q+
Sbjct: 145 ESLGMTSLKLGNREQAREHFTKALRLDRQLPRSLLEMAQI 184
>gi|15599000|ref|NP_252494.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
PAO1]
gi|9949978|gb|AAG07192.1|AE004798_15 type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
PAO1]
Length = 252
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 13/169 (7%)
Query: 25 APLLILMILSLAIWFYLFDG---SHEKKKNIVGENFAQ-ALELFNSNKLDDARSSFEKIL 80
A L+ L+ + L D +K ++ + + Q L + A+ K L
Sbjct: 5 AALVFLLAVGLTGCVTSGDQNPLKTDKGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKAL 64
Query: 81 SQDNKLYNPLSNMYIASILVAKGDTKNAAEIFL-KVANDDLAPLAVRYAATLQAASILVD 139
D + + + A + + + K A E + +A+D + L +
Sbjct: 65 EIDPSSADAHAAL--AVVFQTEMEPKLADEEYRKALASDSRNARVLNNY-----GGFLYE 117
Query: 140 TSSYEEISKILQKLSEPS-NPMHQFANEILGISALKFGKVQKAKTIFEE 187
YEE + L + S+ + P E LG+ +L+ K +AK FE+
Sbjct: 118 QKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEK 166
>gi|33594049|ref|NP_881693.1| hypothetical protein BP3128 [Bordetella pertussis Tohama I]
gi|33564123|emb|CAE43395.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332383466|gb|AEE68313.1| hypothetical protein BPTD_3090 [Bordetella pertussis CS]
Length = 628
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 12/132 (9%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLA 124
+ + D+A +I D+ ++M A++ +G A + + D
Sbjct: 389 DQGRYDEAIRELGRI---DDPAMRYSAHMRQATLRARQGRIDGALAMVDRA---DPQDDE 442
Query: 125 VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFA--NEILGISALKFGKVQKAK 182
R L A IL D +++ + + L M L + + G++ + +
Sbjct: 443 ERTLGVLTKAQILRDA---DQVDRAVAILVAADKAMPDTVEIKYELAMLYERQGRIDQLE 499
Query: 183 TIFEE-LAKDNN 193
+ E +A D +
Sbjct: 500 RLLREVIALDPD 511
>gi|316934556|ref|YP_004109538.1| tetratricopeptide-repeat containing protein [Rhodopseudomonas
palustris DX-1]
gi|315602270|gb|ADU44805.1| tetratricopeptide TPR_2 [Rhodopseudomonas palustris DX-1]
Length = 435
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATL----QAASILVDTSSYE 144
++ M IA + + K ++ D L + A L + A V+ YE
Sbjct: 3 AVAAMLIAVSGASAQEAKPTPAAVVQQGYDALFNQMYQQPANLDVSFKFAHAAVERGDYE 62
Query: 145 EISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
L+++ NP LG+ K + A+ + N P I +
Sbjct: 63 AAIGALERMLF-FNPDLPRVKLELGVLYFKLASYEIARGYLADAINGGNVPDDIRAQVMA 121
Query: 205 ILANII 210
LA I
Sbjct: 122 YLAEID 127
>gi|242077660|ref|XP_002448766.1| hypothetical protein SORBIDRAFT_06g032810 [Sorghum bicolor]
gi|241939949|gb|EES13094.1| hypothetical protein SORBIDRAFT_06g032810 [Sorghum bicolor]
Length = 545
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 20/87 (22%)
Query: 110 EIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILG 169
+ +A D A+R ++ + P+ + A L
Sbjct: 63 RLLAALARDGDGDAALRVLRRMRLS----------------SPPCAPTAASYTSAMSALA 106
Query: 170 ISALKFGKVQKAKTIFEELAKDNNSPF 196
K G+ A ++F+++ + +P
Sbjct: 107 ----KAGRPADAASLFDDMLANGVAPD 129
>gi|229822609|ref|YP_002884135.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
[Beutenbergia cavernae DSM 12333]
gi|229568522|gb|ACQ82373.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
[Beutenbergia cavernae DSM 12333]
Length = 749
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 6/133 (4%)
Query: 61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNM--YIASILVAKGDTKNAAEIFLKVAND 118
+ LF + +L + Y PL+ + Y+A+ G+ + + A D
Sbjct: 390 MTLFQAGQLSTVGKWLRALGDDAVVAYPPLAVLAGYVAAYEGRAGEAERWGAVVDAAAFD 449
Query: 119 DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNP----MHQFANEILGISALK 174
+ +A + + L+ S P A G++ L
Sbjct: 450 GEMVDGSASFDSARAMYRALRCPQGPQALLDDAALAVASEPEWSVWRDTALTASGLARLL 509
Query: 175 FGKVQKAKTIFEE 187
G V A FE
Sbjct: 510 VGDVDGAAREFER 522
>gi|197122665|ref|YP_002134616.1| lytic transglycosylase catalytic [Anaeromyxobacter sp. K]
gi|196172514|gb|ACG73487.1| Lytic transglycosylase catalytic [Anaeromyxobacter sp. K]
Length = 763
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 46/147 (31%), Gaps = 13/147 (8%)
Query: 58 AQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAN 117
+A L + +A + + + +A G A+ + +VA
Sbjct: 307 LRAAALVGLGRHAEAARVAAPFADDPDPGVQRSARLALARAAARAGRVDEASRRYREVAA 366
Query: 118 DDLAPLA---------VRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEIL 168
AP+A + A AA + D Y + L + + +E L
Sbjct: 367 -SDAPIAGLPEWRQRDLGDEAAYLAAWLHYDAGDYRRAAAELDAFARAYRRTSRRVDEAL 425
Query: 169 GISAL---KFGKVQKAKTIFEELAKDN 192
+A + G+ A F L++
Sbjct: 426 WFAAWSRYRLGRTADAARAFARLSRGP 452
>gi|222053755|ref|YP_002536117.1| glycosyl transferase family 2 [Geobacter sp. FRC-32]
gi|221563044|gb|ACM19016.1| glycosyl transferase family 2 [Geobacter sp. FRC-32]
Length = 3011
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 23/169 (13%)
Query: 32 ILSLAIWFYLFDGSHEKK------KNIVGEN-------FAQALELFNSNKLDDARSSFEK 78
+ W++ F G + G+ ++ A+ L N + +A++ E
Sbjct: 1067 VTEGVRWYWAFFGDSVTAVSPALSASAEGDTVEAPEAVYSAAVSLANEGNVAEAQNRLEH 1126
Query: 79 ILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVR-YAATLQAASIL 137
+L K L++ + + G+T+ A F + + + A +
Sbjct: 1127 LLRHHPKF--VLAHNDLGVLYSNLGETEKALAHFEQATQLEPTNATFQKNLADFYQVVL- 1183
Query: 138 VDTSSYEEISKI-LQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185
E+ +I ++ L+ + A LG + GK A+ F
Sbjct: 1184 ---GRTEDALQIYVKLLAMHPKDLEVLAG--LGKICVSVGKHDDARHFF 1227
>gi|326779525|ref|ZP_08238790.1| TIR protein [Streptomyces cf. griseus XylebKG-1]
gi|326659858|gb|EGE44704.1| TIR protein [Streptomyces cf. griseus XylebKG-1]
Length = 1499
Score = 34.6 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 60 ALELFNSNKLDDARSSFEKILSQ-----DNKLYNPL-SNMYIASILVAKGDTKNAAEIFL 113
A L+ +L++A + ++L+ + + L + +A L A G + A +
Sbjct: 1040 AASLYAVGRLEEAEALRVQVLADCEEVLGERHPDTLTARASLAGSLYAVGRVEEAIVLET 1099
Query: 114 KVANDDLAPLAVRYAATLQA---------ASILVDTSS--YEEISKILQKLSEPSNPMHQ 162
+V D L R+ TL A A V+ + YE + +++ +P
Sbjct: 1100 RVLADREEVLGERHPDTLTARSSLAFSFHAVGRVEEAMALYERVLADSEEVLGGRHPDTL 1159
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDNNS------PFGISTRSQMI 205
A L S G+ ++A ++E + D+ P ++ R+ +
Sbjct: 1160 SARAGLAFSFHAAGRTEEAMALYERVLADSEEVLGERHPDTLAARANLA 1208
>gi|254475403|ref|ZP_05088789.1| thioredoxin domain protein [Ruegeria sp. R11]
gi|214029646|gb|EEB70481.1| thioredoxin domain protein [Ruegeria sp. R11]
Length = 316
Score = 34.6 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 10/136 (7%)
Query: 55 ENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLK 114
E A ++ + DA +F ++ +D+K S + A + + D A
Sbjct: 146 EAVEMAEQMLAEGNIADAAQTFAAVIGEDDKNAAAYSGLARAHVAMGDLDQAEAVL---- 201
Query: 115 VANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSE--PSNPMHQFANEILGISA 172
+ AP + AA ++AA + + E + + +L +NP A L +
Sbjct: 202 ----NGAPAEISTAAEIEAAHAQIALARQAENAGPVAELRAKVDANPDDLQARFDLAQAL 257
Query: 173 LKFGKVQKAKTIFEEL 188
G + A L
Sbjct: 258 HAAGDAEAAVEELLAL 273
>gi|188577788|ref|YP_001914717.1| thioredoxin [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522240|gb|ACD60185.1| thioredoxin [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 285
Score = 34.6 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 103 GDTKNAAEIFLKV-ANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMH 161
GDT A ++ + AN AVR A L A++L D + + +N
Sbjct: 163 GDTAEAEQLIDALPANLATDDRAVRAKARLSFANVLKDAPDAGTLQA-----TVDANGAD 217
Query: 162 QFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILA 207
A +LG+ L G + A F E+ + + + R +I A
Sbjct: 218 LRARHLLGVRHLLDGNDEAALEQFLEMLRQDRTFDDNRPRRSLIDA 263
>gi|154489999|ref|ZP_02030260.1| hypothetical protein PARMER_00228 [Parabacteroides merdae ATCC
43184]
gi|154089441|gb|EDN88485.1| hypothetical protein PARMER_00228 [Parabacteroides merdae ATCC
43184]
Length = 591
Score = 34.6 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 51 NIVGENFAQALELF----NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTK 106
+NF L L N +A +EK++ D L N Y+A L +G+
Sbjct: 112 AYSSDNFTYRLALATMSRNLGMFGEASDEYEKLVK-DYPGKPEL-NYYLADALTQEGEIG 169
Query: 107 NAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANE 166
A + + + + A+ + + L + K ++KL+ PM
Sbjct: 170 KAIDAYDALESSIGMSEAL-SMQKYKLYNAL---EQNDNAFKEVEKLAAKF-PMESRYQI 224
Query: 167 ILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQ 203
ILG L+ KA +++ + D SP+ I + +
Sbjct: 225 ILGDLHLEKNDTVKALKYYQKAHEIDPESPYYIVSMAN 262
>gi|330944631|gb|EGH46578.1| thioredoxin [Pseudomonas syringae pv. pisi str. 1704B]
gi|330969745|gb|EGH69811.1| thioredoxin [Pseudomonas syringae pv. aceris str. M302273PT]
gi|330976716|gb|EGH76757.1| thioredoxin [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 290
Score = 34.6 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQALFAESRFAEAEAQLKVLLGEDNTNGAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + + Q A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDAAELKSRLAQNPQDDEAALQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|187927822|ref|YP_001898309.1| thioredoxin [Ralstonia pickettii 12J]
gi|187724712|gb|ACD25877.1| thioredoxin [Ralstonia pickettii 12J]
Length = 281
Score = 34.6 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 47/154 (30%), Gaps = 6/154 (3%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAE 110
+ + L + + AR +F+ L+ D + + ++L+ GD A +
Sbjct: 108 QPAEVAYREGLAASQAGETAHAREAFQNALAFDPGF--DAARFALVNLLLDSGDVHAAQD 165
Query: 111 IFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170
F ++ T A+ DT + + + P + A L
Sbjct: 166 EFALLSPKAPQDERYAPLETRLRATERADTLPDAGALRTV----VEAQPDNLQARLDLAQ 221
Query: 171 SALKFGKVQKAKTIFEELAKDNNSPFGISTRSQM 204
+ + A + + + + R M
Sbjct: 222 QYIAAQDYEAALEQLLAIVERDRAFRDDIARKTM 255
>gi|66047693|ref|YP_237534.1| thioredoxin [Pseudomonas syringae pv. syringae B728a]
gi|63258400|gb|AAY39496.1| Thioredoxin [Pseudomonas syringae pv. syringae B728a]
Length = 290
Score = 34.6 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 10/128 (7%)
Query: 52 IVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEI 111
+ QA LF ++ +A + + +L +DN L + A L +G+ A +
Sbjct: 119 PAADPLKQAQALFAESRFAEAEAQLKVLLGEDNTNGAAL--ILYARCLAERGELSEAKAV 176
Query: 112 FLKVANDDLAPLAVRYAATL----QAASILVDTSSYEEISKILQKLSEPSNPMHQFANEI 167
V D A L QAA++ E+ L + + Q A +
Sbjct: 177 LDAVTGDAHKAELAGAKAQLTFLAQAATL----PDAAELKSRLAQNPQDDEAALQLAIQQ 232
Query: 168 LGISALKF 175
L +
Sbjct: 233 LSRQQYEA 240
>gi|77461012|ref|YP_350519.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
gi|77385015|gb|ABA76528.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 248
Score = 34.6 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 3/95 (3%)
Query: 88 NPLSNMYIASILVAKGDTKNAAEIFLKVAN-DDLAPLAVRYAATLQAASILVDTSSYEEI 146
L+ + A A GD A+ + P + A ++ A D E+
Sbjct: 145 PVLALLTTAQQQQAGGDLNGASSSLERAQRVAPREPQVLYRLAQVRMA--QGDAPQAEQT 202
Query: 147 SKILQKLSEPSNPMHQFANEILGISALKFGKVQKA 181
++ ++ + E++ + K G A
Sbjct: 203 ARRALTMANGRPDLQASLWELIAQAREKQGDSAGA 237
>gi|323345711|ref|ZP_08085934.1| 4-alpha-glucanotransferase [Prevotella oralis ATCC 33269]
gi|323093825|gb|EFZ36403.1| 4-alpha-glucanotransferase [Prevotella oralis ATCC 33269]
Length = 522
Score = 34.6 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 12/111 (10%), Positives = 36/111 (32%), Gaps = 10/111 (9%)
Query: 94 YIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKL 153
Y+A+ + + +F+ + D+ A + L+ + + + +
Sbjct: 355 YLAAERAEQ--IIGSTCMFVVIEADNGAGMLKPALKRLRPVYVELQSEPE---KTTFEFS 409
Query: 154 SEPSNPMHQFA----NEILGISALKFGKVQKAKTIFEELA-KDNNSPFGIS 199
P A + ++ V +A+ F + + +P ++
Sbjct: 410 HVDEYPYRSVAVVAGGTTVSLARWWEEDVDRAQRYFVTILHRKGKAPRALT 460
>gi|312385821|gb|EFR30226.1| hypothetical protein AND_00290 [Anopheles darlingi]
Length = 1122
Score = 34.6 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-A 121
L +K+D A + F +L+Q L + A I K D + A + K +
Sbjct: 185 LLEGDKMDQADAQFNFVLNQSPSNIPSL--LGKACIAFNKKDYRGALAFYKKALRTNPNC 242
Query: 122 PLAVR 126
P AVR
Sbjct: 243 PAAVR 247
>gi|253989561|ref|YP_003040917.1| tetratricopeptide repeat-containing protein [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781011|emb|CAQ84173.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 389
Score = 34.6 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 58/165 (35%), Gaps = 40/165 (24%)
Query: 32 ILSLAIWFYLFDGSHEKKKNIV---GENFAQALELFNSNKLDDARSSFEKILSQDNKLYN 88
+ + W+ + + K+ + + SN+ D A F ++L +D+ +
Sbjct: 11 VAAAYGWYMGRRSAQQDKQQNADRLSREYVAGVNFLLSNQQDKAVDLFLEMLKEDSSAFE 70
Query: 89 PLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISK 148
+++ + ++ ++G+ + A I + +++AS+ D
Sbjct: 71 --AHLTLGNLFRSRGEVERAIRIHQSL---------------IESASLTFDQ-------- 105
Query: 149 ILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNN 193
A + LG + G +A+ +F +L +
Sbjct: 106 ------------RLLAVQQLGRDYMSAGLYDRAENMFAQLVNEKE 138
>gi|194882327|ref|XP_001975263.1| GG22221 [Drosophila erecta]
gi|190658450|gb|EDV55663.1| GG22221 [Drosophila erecta]
Length = 869
Score = 34.6 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 59 QALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVAND 118
QA L N+ ++A S+E+++ Y+ + ++++L +G + A + +
Sbjct: 445 QAECLRQLNRTNEAIQSYERVVQLAPFCYD--ARFTLSALLKQQGRHEEAVQALEQPGEA 502
Query: 119 DLAPLAVR 126
D PL R
Sbjct: 503 DGQPLIAR 510
>gi|152996218|ref|YP_001341053.1| Tol-Pal system YbgF [Marinomonas sp. MWYL1]
gi|150837142|gb|ABR71118.1| Tol-Pal system YbgF [Marinomonas sp. MWYL1]
Length = 262
Score = 34.6 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 11/71 (15%)
Query: 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNK------LYNPLSNMYIASILVAKGD 104
+ + A L D+A ++F K + Y L + + +G
Sbjct: 139 AQAQQAYNDAYNLIRQRNFDEAETAFSKFVKDYPDNSLTGNGYYWL-----GEVKLVQGK 193
Query: 105 TKNAAEIFLKV 115
+K A E F V
Sbjct: 194 SKEAIEAFSTV 204
>gi|332980817|ref|YP_004462258.1| hypothetical protein Mahau_0218 [Mahella australiensis 50-1 BON]
gi|332698495|gb|AEE95436.1| Tetratricopeptide TPR_1 repeat-containing protein [Mahella
australiensis 50-1 BON]
Length = 230
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 11/165 (6%)
Query: 38 WFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQD--NKLYNPLSNMYI 95
+ + + + + + + N A F+++L + N + ++ +
Sbjct: 23 YTWFYKQAVKHHTTNAYALLSYGIIKLNEGDYQTADELFKQVLKKKKLNWTIDKIARVDR 82
Query: 96 ASILVAKGDTKNAAEIFLKVAND-DLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS 154
A G+ A EI V + + A ATL A + YE+ + + + +
Sbjct: 83 ALTQWKLGNLDRAIEILEAVCQEYERAD----SFATL--AYFYILKGDYEK-AALYNEKA 135
Query: 155 EPSNPMHQFANEILGISALKFGKVQKAKTIFEE-LAKDNNSPFGI 198
H A + G + G +KAK F++ L K N P +
Sbjct: 136 LEEEEDHPPALDNYGQMYYRQGDYEKAKEYFQKALDKKPNLPDSL 180
>gi|254475750|ref|ZP_05089136.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Ruegeria sp. R11]
gi|214029993|gb|EEB70828.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Ruegeria sp. R11]
Length = 730
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 11/142 (7%)
Query: 65 NSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP-L 123
N+ DA + ++K LS D L+NM + L+ + A E F K
Sbjct: 137 RQNRGQDALALYKKALSLDPACLPALNNM--GNTLLEQDKIIEADECFAKAIEQAPDNAQ 194
Query: 124 AVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKT 183
+ A +Q VD ++ L + + P A L A + G+ +A
Sbjct: 195 LLYNRANIQRQLGNVD------VACKLYEQAARYAPNFLEARYNLAQMAGQAGRQAEAIH 248
Query: 184 IFEELAKDNNSPFGISTRSQMI 205
E++ P R++ +
Sbjct: 249 HLEQILVAR--PADDRARARKL 268
>gi|150396455|ref|YP_001326922.1| TPR repeat-containing protein [Sinorhizobium medicae WSM419]
gi|150027970|gb|ABR60087.1| Tetratricopeptide TPR_2 repeat protein [Sinorhizobium medicae
WSM419]
Length = 802
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 50/124 (40%), Gaps = 7/124 (5%)
Query: 63 LFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP 122
LF + D+A +F + ++ D + + +A + A GD + + + + + +
Sbjct: 625 LFEQRRTDEAEKAFRQAITLDPTFSG--ARINLAELYRASGDNEKSEQAYAEAVAANPDL 682
Query: 123 LAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAK 182
+RY L + EE+ + +L + A + + A+ G+ + A
Sbjct: 683 ADLRYGHGLSLVRQKAMQEAIEELGAAV-RLEPANTRYRMTA--AIALDAV--GRTEDAF 737
Query: 183 TIFE 186
+F+
Sbjct: 738 GLFD 741
>gi|320096184|ref|ZP_08027775.1| hypothetical protein HMPREF9005_2387 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319976887|gb|EFW08639.1| hypothetical protein HMPREF9005_2387 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 1159
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 17/150 (11%)
Query: 60 ALELFNSNKLDDARSSFEKILSQ-----DNKLYNPLS-NMYIASILVAKGDTKNAAEIFL 113
A +L +A FE++L+ + L+ +A + G A ++
Sbjct: 807 AYAYQAVGRLGEAIPLFEEVLADRTRVLGADHPDTLASRNNLAGAYESAGRLGEAIPLYQ 866
Query: 114 KVANDDLA------PLAVR---YAA-TLQAASILVDTSS-YEEISKILQKLSEPSNPMHQ 162
+V D P + A +AA L + YE++ ++ P +P
Sbjct: 867 EVLADSARVLGDDHPQTLASRNNLAYAYRAAGRLGEAIPLYEQVLADRTRVLGPDHPDTL 926
Query: 163 FANEILGISALKFGKVQKAKTIFEELAKDN 192
+ L + G++ +A ++E++ D
Sbjct: 927 ASRNNLAAAYESAGRLGEAIPLYEQVLTDQ 956
>gi|319781910|ref|YP_004141386.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167798|gb|ADV11336.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 544
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L + +LD+A ++F + L+ K + L + + L+ KG AA++F + +
Sbjct: 140 AETLQEAGRLDEALAAFREALAIRPKDADLLHGLGVG--LMEKGKLDEAADLFRQALAIN 197
Query: 120 LAPL 123
A
Sbjct: 198 PAMA 201
>gi|307293765|ref|ZP_07573609.1| sulfotransferase [Sphingobium chlorophenolicum L-1]
gi|306879916|gb|EFN11133.1| sulfotransferase [Sphingobium chlorophenolicum L-1]
Length = 585
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDD 119
A L NK A +++ N + L A++L GD + A ++ ++
Sbjct: 142 ATALHRQNKTAQALEQLDRLQDGFNPAHANL----RAAVLGRLGDFEEAITLYERILAQA 197
Query: 120 L 120
Sbjct: 198 A 198
>gi|291614814|ref|YP_003524971.1| hypothetical protein Slit_2357 [Sideroxydans lithotrophicus ES-1]
gi|291584926|gb|ADE12584.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 591
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 75 SFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAA 134
+ K+ DN LY L + I + K AA+ +L +A P R +AA
Sbjct: 59 ALPKVAMTDNMLYEFL----LGDIAAQRNQPKLAAQAYLDLAKTTRDPRVAR-----RAA 109
Query: 135 SILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNS 194
+ ++ Y+ + + L E P A ++ L GK+Q+A+ + +E+ + + +
Sbjct: 110 QLAYESRDYDTAVESFK-LWEELEPASPLAKQLYLSLLLSGGKLQEARPLLDEVLRADPA 168
Query: 195 PFG 197
G
Sbjct: 169 SAG 171
>gi|115378279|ref|ZP_01465447.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310821098|ref|YP_003953456.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364721|gb|EAU63788.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309394170|gb|ADO71629.1| Tetratricopeptide repeat family protein [Stigmatella aurantiaca
DW4/3-1]
Length = 479
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 44 GSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKG 103
S + + + F AL F++ D AR FE+++ + N + + I +G
Sbjct: 63 ASQDSEDSGPHALFLSALAAFDAGDYDRARKGFEQVVQTSPQSLN--AQFNLGLIAERQG 120
Query: 104 DTKNAAEIFLKVANDDL 120
+A + KV +
Sbjct: 121 RLADAQAAYEKVLAKEP 137
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.310 0.142 0.366
Lambda K H
0.267 0.0433 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,635,603,372
Number of Sequences: 14124377
Number of extensions: 146359427
Number of successful extensions: 723149
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 10074
Number of HSP's that attempted gapping in prelim test: 695431
Number of HSP's gapped (non-prelim): 29452
length of query: 218
length of database: 4,842,793,630
effective HSP length: 133
effective length of query: 85
effective length of database: 2,964,251,489
effective search space: 251961376565
effective search space used: 251961376565
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 78 (34.6 bits)