HHsearch results for GI: 254780423 and protein with PDBid: 2p02_A
>2p02_A S-adenosylmethionine synthetase isoform type-2; structural genomics, structural genomics consortium, SGC, transferase; HET: SAM; 1.21A {Homo sapiens} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1qm4_A 1o92_A* 1o93_A* 1o90_A* 1o9t_A 2obv_A*
Probab=100.00 E-value=0 Score=1305.52 Aligned_cols=375 Identities=46% Similarity=0.776 Sum_probs=356.5
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 99873067300887883168988688999999863601235666760599993149849998785246555543344542
Q gi|254780423|r 1 MSADFLFTSESVSEGHPDKICDRISDEIVDLVYREAIESKMDVNSVRVACEVLVTKNKVIVAGEVRLPHGLSKKDSITGQ 80 (413)
Q Consensus 1 M~~~~lFTSESVs~GHPDKicDqISDaILD~~L~~Dp~sk~~~~~~RVA~Et~v~~~~V~v~GEI~~~~~i~~~~~~tt~ 80 (413)
|+.+||||||||||||||||||||||||||+||+|||+| ||||||++++|+|+|+|||++.+.
T Consensus 15 ~~~~ylFTSESVseGHPDKicDqISDaILD~~L~~Dp~s-------rVA~Et~v~~~~V~v~GEitt~a~---------- 77 (396)
T 2p02_A 15 EEGTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDA-------KVACETVAKTGMILLAGEITSRAA---------- 77 (396)
T ss_dssp --CEEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTC-------EEEEEEEEETTEEEEEEEEECSCC----------
T ss_pred CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-------CEEEEEEEECCEEEEEEEECCCCC----------
T ss_conf 378258995676899970898877879999999659998-------589998875798999999867866----------
Q ss_pred EECCHHHHHHHHHHHHHCCCCCC--CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf 00167789999999984085870--1257332210003333456777554420353000589862488874206645448
Q gi|254780423|r 81 YVVDKEKFEKVVRSVIRSIGYEQ--EGFHWETVDVEVLLHSQSSDIAYGVDNASDDCSTLGAGDQGIMFGYACRETADFM 158 (413)
Q Consensus 81 ~~v~~~di~~ivR~~i~~IGY~~--~gfd~~~~~v~~~i~~QS~dIa~GVd~~~~~~~~~GAGDQGiMFGYAc~ET~~~M 158 (413)
+ ||++|||++|++|||++ .||||++|.|+++|++|||||+|||+.+. ..+++|||||||||||||||||+||
T Consensus 78 --v---d~~~ivR~~i~~IGY~~~~~gfd~~t~~I~~~i~~QSpdIa~GVd~~~-~~~~~GAGDQGiMFGYAc~ET~~lM 151 (396)
T 2p02_A 78 --V---DYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDR-NEEDIGAGDQGLMFGYATDETEECM 151 (396)
T ss_dssp --C---CHHHHHHHHHHHHTCEEGGGTEETTTSEEEEEEECCCHHHHHHHTTTC-CGGGCCBSSCEEEEEEEETTSTTSS
T ss_pred --C---CHHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCHHHHHHHHCCC-CHHHCCCCCCEEEEEECCCCCCCCC
T ss_conf --8---799999999998451505418551214788601113847665430477-6766077764268631047886556
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC----CEEEEEEEEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 75799999999999997520357641001178268999974976----31454578876506732689999988765201
Q gi|254780423|r 159 PAPIYYAHRILRTLADARKNSGGDVSKLGPDAKSQVTIRYVDNK----VCEVKSIVLSIQHFDPTWDRGKVRSVVEPYIL 234 (413)
Q Consensus 159 Plpi~lAh~L~krL~~~Rk~~~g~~~~L~PDgKsQVTveY~~~k----P~~i~tVViStQH~~~~~~~~~~~~ii~~vI~ 234 (413)
||||+|||+|+|||+++||+ +.+|||||||||||||+|++++ |+||+|||+|+||++.....+.+++++++||+
T Consensus 152 Plpi~LAhrL~krL~~~Rk~--g~l~~LrPDgKsQVTveY~~~~~~~~P~rI~tVViS~QH~~~v~~~~lr~~i~~~vi~ 229 (396)
T 2p02_A 152 PLTIVLAHKLNAKLAELRRN--GTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIK 229 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHT--TSSTTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECSSCCHHHHHHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 73899999999999999963--9987658887325899985598753306886788850468867999999999999998
Q ss_pred CCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23322468854279991788378558730036555611102457766677753356574404577888999999999750
Q gi|254780423|r 235 KALEDIKISPDCSWYINPAGKFVIGGPCSDAGLTGRKIIVDTYGGASPHGGGAFSGKDITKVDRAAAYAARYLAKNIVAA 314 (413)
Q Consensus 235 ~~l~~~~l~~~t~~~INPtG~FviGGP~~D~GLTGRKiiVDtYGg~~~hGGGAfSGKDptKVDRSaAY~AR~iAKniVaa 314 (413)
+++|+.+++++|+||||||||||+|||.|||||||||||||||||++|||||||||||||||||||||||||+|||||||
T Consensus 230 ~v~~~~~ld~~t~~~INPtG~FviGGP~~D~GLTGRKiiVDTYGg~~~hGGGAfSGKDptKVDRSaAY~AR~iAKniVaa 309 (396)
T 2p02_A 230 AVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKG 309 (396)
T ss_dssp HHSCGGGCCTTCEEEESTTSCCCSCGGGTSCEETTSCTTTTTTTTSSCCCSCCCTTBCTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHCCHHCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 75303127967469966999845179742456666510000257744668866788984434544011577889999862
Q ss_pred CHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCC
Q ss_conf 82322110013005835550799982488868989999999974599978999860899862021076020789876667
Q gi|254780423|r 315 GLADRCTIQLSYAIGISRPLSIFVDLHDSGKVSESCVANAINKVMDLSVSGIRDHLNLSRPIYAQTSAYGHFGRSANQDG 394 (413)
Q Consensus 315 gla~~c~vqlsYaIG~~~P~si~V~t~gt~~~~d~~i~~~i~~~fdl~p~~Ii~~l~L~~piy~~ta~yGHFGr~~~~~~ 394 (413)
|||++||||||||||+++|+||+|+||||+++++++|.++|+++|||||++||++|+|++|||++||+||||||+
T Consensus 310 gla~~c~vqlsYaIG~~~Pvsi~v~t~gT~~~~~~~i~~~i~~~Fdl~p~~Ii~~L~L~~piy~~ta~yGHFGr~----- 384 (396)
T 2p02_A 310 GLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRD----- 384 (396)
T ss_dssp TSCSEEEEEEEECBTCCSCSEEEEECTTCCSSCHHHHHHHHHHHCCCCHHHHHHHHTTTSSCGGGGSSSCSSSST-----
T ss_pred CCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCC-----
T ss_conf 798747999973326677618999807888689999999999737998899998707899866555375788999-----
Q ss_pred CCCHHHHHHHH
Q ss_conf 89545457899
Q gi|254780423|r 395 FFPWEALDLIE 405 (413)
Q Consensus 395 ~f~WE~~d~v~ 405 (413)
+||||++|+++
T Consensus 385 ~~~WE~~d~~~ 395 (396)
T 2p02_A 385 SFPWEVPKKLK 395 (396)
T ss_dssp TCGGGSCCCCC
T ss_pred CCCCCCCCCCC
T ss_conf 99854636778