HHsearch alignment for GI: 254780424 and conserved domain: COG2973
>COG2973 TrpR Trp operon repressor [Transcription].
Probab=91.51 E-value=0.57 Score=26.40 Aligned_cols=52 Identities=17% Similarity=0.324 Sum_probs=35.3
Q ss_pred HHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 99999999999--81997999999872469999998528988358999999975
Q gi|254780424|r 14 NVGKRIRLRRM--ILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEV 65 (144)
Q Consensus 14 ~iG~rIr~~R~--~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~ 65 (144)
T Consensus 45 al~~Rv~Iv~eLL~ge~sQREi~~~LgvsiAtITRGSN~LK~~~~~~k~~L~~~ 98 (103)
T COG2973 45 ALGTRVRIVEELLRGELSQREIAQKLGVSIATITRGSNSLKTADPEFKQWLEKV 98 (103)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHHHHHHH
T ss_conf 999999999999956353999999858625655044444235987899999997