HHsearch alignment for GI: 254780424 and conserved domain: COG2973

>COG2973 TrpR Trp operon repressor [Transcription].
Probab=91.51  E-value=0.57  Score=26.40  Aligned_cols=52  Identities=17%  Similarity=0.324  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             99999999999--81997999999872469999998528988358999999975
Q gi|254780424|r   14 NVGKRIRLRRM--ILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEV   65 (144)
Q Consensus        14 ~iG~rIr~~R~--~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~   65 (144)
T Consensus        45 al~~Rv~Iv~eLL~ge~sQREi~~~LgvsiAtITRGSN~LK~~~~~~k~~L~~~   98 (103)
T COG2973          45 ALGTRVRIVEELLRGELSQREIAQKLGVSIATITRGSNSLKTADPEFKQWLEKV   98 (103)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHHHHHHH
T ss_conf             999999999999956353999999858625655044444235987899999997