HHsearch alignment for GI: 254780424 and conserved domain: COG3423

>COG3423 Nlp Predicted transcriptional regulator [Transcription].
Probab=94.84  E-value=0.092  Score=31.47  Aligned_cols=57  Identities=16%  Similarity=0.117  Sum_probs=46.6

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCC
Q ss_conf             999999981997999999872469999998528988358999999975499999950677
Q gi|254780424|r   18 RIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDVS   77 (144)
Q Consensus        18 rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~~   77 (144)
T Consensus        12 dI~A~Lkk~G~Sl~~LS~~agls~~tL~n~L~rp-~pkgEri--IA~algv~P~eIWp~R   68 (82)
T COG3423          12 DIIAALKKKGTSLAALSREAGLSSSTLANALDRP-WPKGERI--IADALGVPPEEIWPSR   68 (82)
T ss_pred             HHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCC-CCHHHHH--HHHHHCCCHHHHCCHH
T ss_conf             9999999856429999988087878999987478-8718899--9999589888818342