HHsearch alignment for GI: 254780424 and conserved domain: PHA01976
>PHA01976 helix-turn-helix protein.
Probab=99.65 E-value=4.4e-16 Score=123.22 Aligned_cols=64 Identities=11% Similarity=0.169 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCC
Q ss_conf 9999999999981997999999872469999998528988358999999975499999950677
Q gi|254780424|r 14 NVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDVS 77 (144)
Q Consensus 14 ~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~~ 77 (144)
T Consensus 2 ~F~~RL~~lR~~~g~sQ~eLA~~lGVs~~~is~wE~g~~~P~~d~L~~la~~~~VS~D~LlGr~ 65 (67)
T PHA01976 2 SFAIQLIKARNARAWSAPELSRRAGVRHSLIYDFEADKRLPNLKTLLRLADALGVTLDWLCGRC 65 (67)
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
T ss_conf 7899999999986999999999949989999999878989998999999999797899992678