HHsearch alignment for GI: 254780424 and conserved domain: PRK09492

>PRK09492 treR trehalose repressor; Provisional.
Probab=95.60  E-value=0.019  Score=35.91  Aligned_cols=49  Identities=10%  Similarity=0.057  Sum_probs=40.7

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHHHCCCCHHHH
Q ss_conf             81997999999872469999998528988358---99999997549999995
Q gi|254780424|r   25 ILGMSQEKLGECLGITFQQVQKYEKGVNRVGA---SRLQHISEVLESPISFF   73 (144)
Q Consensus        25 ~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~---~~L~~iA~~l~v~~~~l   73 (144)
T Consensus         2 ~kkvTikDIA~~aGVS~aTVSrvLn~~~~vs~eTr~rV~~~a~elgY~Pn~~   53 (315)
T PRK09492          2 QNKLTIKDIARLSGVGKSTVSRVLNNEPKVSPRTRERVEAVINQHGFSPSKS   53 (315)
T ss_pred             CCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf             8988799999998979999999978989999999999999999969980778