HHsearch alignment for GI: 254780424 and conserved domain: PRK09492
>PRK09492 treR trehalose repressor; Provisional.
Probab=95.60 E-value=0.019 Score=35.91 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=40.7
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHHHCCCCHHHH
Q ss_conf 81997999999872469999998528988358---99999997549999995
Q gi|254780424|r 25 ILGMSQEKLGECLGITFQQVQKYEKGVNRVGA---SRLQHISEVLESPISFF 73 (144)
Q Consensus 25 ~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~---~~L~~iA~~l~v~~~~l 73 (144)
T Consensus 2 ~kkvTikDIA~~aGVS~aTVSrvLn~~~~vs~eTr~rV~~~a~elgY~Pn~~ 53 (315)
T PRK09492 2 QNKLTIKDIARLSGVGKSTVSRVLNNEPKVSPRTRERVEAVINQHGFSPSKS 53 (315)
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf 8988799999998979999999978989999999999999999969980778