HHsearch alignment for GI: 254780424 and conserved domain: PRK09726
>PRK09726 DNA-binding transcriptional regulator HipB; Provisional.
Probab=99.22 E-value=5.2e-11 Score=90.74 Aligned_cols=68 Identities=22% Similarity=0.374 Sum_probs=64.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf 9987668998999999999999998199799999987246999999852898835899999997549999
Q gi|254780424|r 1 MVGNKKIPNPVDINVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPI 70 (144)
Q Consensus 1 ~~~~~~~~~~~d~~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~ 70 (144)
T Consensus 1 ~~~~~ki~sp~--qLa~~Lr~~Rk~~gLsQ~~lA~~vGi~Q~TiS~~E~~p~~~~leTLFkiL~aL~Lel 68 (88)
T PRK09726 1 MMSFQKIYSPT--QLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSM 68 (88)
T ss_pred CCCCCCCCCHH--HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEE
T ss_conf 98752028999--999999999998598799999981974999999975998786999999999678768