HHsearch alignment for GI: 254780424 and conserved domain: PRK09943

>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional.
Probab=99.68  E-value=1.6e-16  Score=126.07  Aligned_cols=68  Identities=26%  Similarity=0.339  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCC
Q ss_conf             99999999999998199799999987246999999852898835899999997549999995067744
Q gi|254780424|r   12 DINVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDVSPT   79 (144)
Q Consensus        12 d~~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~~~~   79 (144)
T Consensus         5 ~~~iG~rIr~lR~~~glTL~eLA~~sGvS~s~LSqIErg~~~PSl~tL~kIa~aL~v~l~~lf~~~~~   72 (185)
T PRK09943          5 GLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEK   72 (185)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCC
T ss_conf             32488999999998599899999887969999999987999999999999999849999998277455