HHsearch alignment for GI: 254780424 and conserved domain: PRK11303
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional.
Probab=94.66 E-value=0.062 Score=32.59 Aligned_cols=46 Identities=7% Similarity=0.128 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCC---CC---HHHHHHHHHHCCCCHHHH
Q ss_conf 97999999872469999998528988---35---899999997549999995
Q gi|254780424|r 28 MSQEKLGECLGITFQQVQKYEKGVNR---VG---ASRLQHISEVLESPISFF 73 (144)
Q Consensus 28 lTQ~eLA~~lGvs~s~is~~E~G~~~---ps---~~~L~~iA~~l~v~~~~l 73 (144)
T Consensus 1 vTikDVA~~AGVS~aTVSrvLNg~~~~~~Vs~~Tr~rV~~aa~eLgY~Pn~~ 52 (330)
T PRK11303 1 MKLDEIARLAGVSRTTASYVINGKAKQYRISDKTVEKVMAVVREHNYHPNAV 52 (330)
T ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf 9789999997979989988838999888769999999999999968994888