HHsearch alignment for GI: 254780424 and conserved domain: TIGR02607
>TIGR02607 antidote_HigA addiction module antidote protein, HigA family; InterPro: IPR013430 Proteins in this entry form a distinct group of helix-turn-helix proteins, which are strictly bacterial and nearly always shorter than 110 amino acids. They include the characterised member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is encoded by the upstream member of the gene pair.; GO: 0003677 DNA binding.
Probab=98.33 E-value=5.9e-07 Score=64.73 Aligned_cols=64 Identities=17% Similarity=0.310 Sum_probs=57.0
Q ss_pred HHHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCC
Q ss_conf 9999999-999998199799999987246999999852898835899999997549999995067
Q gi|254780424|r 13 INVGKRI-RLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDV 76 (144)
Q Consensus 13 ~~iG~rI-r~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~ 76 (144)
T Consensus 5 ~HPGE~L~eEfL~PLg~s~~~LA~~LgVsr~~~sriv~~~~~iT~dmALRL~~~lG~sp~~WLnl 69 (81)
T TIGR02607 5 AHPGEILLEEFLEPLGLSVRALAKALGVSRSTLSRIVNGRRGITADMALRLAKALGTSPEFWLNL 69 (81)
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHH
T ss_conf 78841328775210470689999870999788888874489988889999999738987689987