HHsearch alignment for GI: 254780424 and conserved domain: cd00093

>cd00093 HTH_XRE Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
Probab=99.23  E-value=2e-11  Score=93.40  Aligned_cols=58  Identities=24%  Similarity=0.435  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH
Q ss_conf             9999999998199799999987246999999852898835899999997549999995
Q gi|254780424|r   16 GKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFF   73 (144)
Q Consensus        16 G~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l   73 (144)
T Consensus         1 g~~l~~~r~~~~ls~~~lA~~~gis~~~l~~~e~g~~~p~~~~l~~la~~~~~~~~~l   58 (58)
T cd00093           1 GERLKELRKEKGLTQEELAEKLGVSRSTISRIENGKRNPSLETLEKLAKALGVSLDEL   58 (58)
T ss_pred             CHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHC
T ss_conf             9899999997599999995714999999999987998999999999999938989879