HHsearch alignment for GI: 254780424 and conserved domain: pfam01371

>pfam01371 Trp_repressor Trp repressor protein. This protein binds to tryptophan and represses transcription of the Trp operon.
Probab=92.50  E-value=0.18  Score=29.62  Aligned_cols=37  Identities=16%  Similarity=0.362  Sum_probs=32.0

Q ss_pred             HHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999999--981997999999872469999998528
Q gi|254780424|r   14 NVGKRIRLRR--MILGMSQEKLGECLGITFQQVQKYEKG   50 (144)
Q Consensus        14 ~iG~rIr~~R--~~~glTQ~eLA~~lGvs~s~is~~E~G   50 (144)
T Consensus        34 ala~R~~va~~LL~~~~syreI~~~~g~S~aTItRvsr~   72 (88)
T pfam01371        34 ALAQRLRIAKELLRGELSQREIAQELGASIATITRGSNC   72 (88)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf             999999999999978998999999859852314788999