HHsearch alignment for GI: 254780424 and conserved domain: pfam01371
>pfam01371 Trp_repressor Trp repressor protein. This protein binds to tryptophan and represses transcription of the Trp operon.
Probab=92.50 E-value=0.18 Score=29.62 Aligned_cols=37 Identities=16% Similarity=0.362 Sum_probs=32.0
Q ss_pred HHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999--981997999999872469999998528
Q gi|254780424|r 14 NVGKRIRLRR--MILGMSQEKLGECLGITFQQVQKYEKG 50 (144)
Q Consensus 14 ~iG~rIr~~R--~~~glTQ~eLA~~lGvs~s~is~~E~G 50 (144)
T Consensus 34 ala~R~~va~~LL~~~~syreI~~~~g~S~aTItRvsr~ 72 (88)
T pfam01371 34 ALAQRLRIAKELLRGELSQREIAQELGASIATITRGSNC 72 (88)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 999999999999978998999999859852314788999