HHsearch alignment for GI: 254780424 and conserved domain: smart00354

>smart00354 HTH_LACI helix_turn _helix lactose operon repressor.

Probab=94.40  E-value=0.078  Score=31.96  Aligned_cols=45  Identities=16%  Similarity=0.159  Sum_probs=35.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCCCHH---HHHHHHHHCCCCHHHH
Q ss_conf             79999998724699999985289883589---9999997549999995
Q gi|254780424|r   29 SQEKLGECLGITFQQVQKYEKGVNRVGAS---RLQHISEVLESPISFF   73 (144)
Q Consensus        29 TQ~eLA~~lGvs~s~is~~E~G~~~ps~~---~L~~iA~~l~v~~~~l   73 (144)
T Consensus         2 Ti~dvA~~aGVS~sTVSr~ln~~~~Vs~~tr~rV~~~a~~lgY~pn~~   49 (70)
T smart00354        2 TIKDVARLAGVSKATVSRVLNGNGRVSEETREKVLAAMEELGYIPNRV   49 (70)
T ss_pred             CHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf             899999998959999999977999899999999999999978998999