HHsearch results for GI: 254780424 and protein with PDBid: 1u78_A
>1u78_A TC3 transposase, transposable element TC3 transposase; transposon DNA, bipartite DNA-binding, HTH- motif, DNA binding protein/DNA complex; 2.69A {Caenorhabditis elegans} SCOP: a.4.1.2 a.4.1.2
Probab=91.13 E-value=0.2 Score=27.97 Aligned_cols=35 Identities=11% Similarity=0.234 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999981997999999872469999998528
Q gi|254780424|r 15 VGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKG 50 (144)
Q Consensus 15 iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G 50 (144)
.=.+|-.++ ..|+|+.++|..+|+|.++|++|-+-
T Consensus 11 ~R~~I~~l~-~~G~s~~~IAk~lg~s~stV~r~lk~ 45 (141)
T 1u78_A 11 ERAQLDVMK-LLNVSLHEMSRKISRSRHCIRVYLKD 45 (141)
T ss_dssp HHHHHHHHH-HTTCCHHHHHHHHTCCHHHHHHHHHS
T ss_pred HHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 999999999-97999999999989578999999997