HHsearch results for GI: 254780424 and protein with PDBid: 3fmy_A

>3fmy_A HTH-type transcriptional regulator MQSA (YGIT/B3021); helix-turn-helix, DNA-binding, transcription regulation, DNA binding protein; HET: MEQ; 1.40A {Escherichia coli k-12}
Probab=99.25  E-value=2.3e-12  Score=98.05  Aligned_cols=61  Identities=21%  Similarity=0.233  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHC
Q ss_conf             99999999999819979999998724699999985289883589999999754999999506
Q gi|254780424|r   14 NVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFD   75 (144)
Q Consensus        14 ~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~   75 (144)
                      ..|++||++|+.+||||++||+.+|||.++|++||+|.+.|+.. +.+++++|++++++|.+
T Consensus        11 ~~p~~ik~~R~~~gltQ~elA~~lgvs~~ti~~~E~G~~~P~~~-~~~l~~~l~~~P~~l~e   71 (73)
T 3fmy_A           11 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAXPHPS-TIKLLRVLDKHPELLNE   71 (73)
T ss_dssp             CCHHHHHHHHHHTTCCHHHHHHHHCSCTTHHHHHHTTSSCCCHH-HHHHHHHHHHCGGGHHH
T ss_pred             CCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHH-HHHHHHHHCCCHHHHHH
T ss_conf             59999999999859999999999897999999999799799999-99999998779188887