HHSEARCH alignment of GI: 254780424 and SCOP domain: d1y7ya1

Alignment

Probab=99.56  E-value=3e-15  Score=114.93  Aligned_cols=62  Identities=26%  Similarity=0.360  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH
Q ss_conf             99999999999981997999999872469999998528988358999999975499999950
Q gi|254780424|r   13 INVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFF   74 (144)
Q Consensus        13 ~~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~   74 (144)
                      +.+|++||++|+.+||||++||+.+|+|.++|++||+|+..|++++|.+||++|+|++++||
T Consensus         8 ~~~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~E~g~~~p~~~~l~~ia~~l~v~~~~lF   69 (69)
T d1y7ya1           8 VKFGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATALDIEPRELF   69 (69)
T ss_dssp             HHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTSCGGGGC
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHC
T ss_conf             99999999999983999999986829989899999879999999999999999695999979

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Restriction-modification controller protein C.AhdI
species: Aeromonas hydrophila [TaxId: 644]