HHSEARCH alignment of GI: 254780424 and SCOP domain: d2auwa1

Alignment

Probab=98.82  E-value=3.2e-09  Score=76.31  Aligned_cols=43  Identities=16%  Similarity=0.091  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf             9999999998199799999987246999999852898835899
Q gi|254780424|r   16 GKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASR   58 (144)
Q Consensus        16 G~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~   58 (144)
                      +++++++|+.+||||++||+.+|||+.+|++||+|.+.++...
T Consensus         3 ~e~~k~~R~~~gltQ~elA~~LGvs~~ti~~yE~G~r~iP~~v   45 (67)
T d2auwa1           3 HEMFGDWMHRNNLSLTTAAEALGISRRMVSYYRTAHKIIPRTI   45 (67)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHH
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
T ss_conf             8999999999599999999995998999999986999999899

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: NE0471 C-terminal domain-like
domain: Hypothetical protein NE0471 C-terminal domain
species: Nitrosomonas europaea [TaxId: 915]