HHSEARCH alignment of GI: 254780424 and SCOP domain: d2b5aa1

Alignment

Probab=99.59  E-value=3.3e-15  Score=114.69  Aligned_cols=70  Identities=24%  Similarity=0.419  Sum_probs=64.0

Q ss_pred             CCHHH--HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCC
Q ss_conf             99899--99999999999981997999999872469999998528988358999999975499999950677
Q gi|254780424|r    8 PNPVD--INVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDVS   77 (144)
Q Consensus         8 ~~~~d--~~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~~   77 (144)
                      .|.+|  ..+|++||.+|+.+||||++||+.+|||+++|++||+|.+.|+.+.|.+||.+|||++++||...
T Consensus         2 ~~~~~~~~~~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~v~~~~l~~~~   73 (77)
T d2b5aa1           2 INEIEIKRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFFRKM   73 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
T ss_conf             863899999999999999980999999998979799999999869989999999999999698999985423

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Regulatory protein C.BclI
species: Bacillus caldolyticus [TaxId: 1394]