HHSEARCH alignment of GI: 254780424 and SCOP domain: d2ofya1

Alignment
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=99.46  E-value=9.9e-14  Score=105.24  Aligned_cols=65  Identities=20%  Similarity=0.217  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHCCCCHHHHHCCCCC
Q ss_conf             999999999999819979999998724699999985289-8835899999997549999995067744
Q gi|254780424|r   13 INVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGV-NRVGASRLQHISEVLESPISFFFDVSPT   79 (144)
Q Consensus        13 ~~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~-~~ps~~~L~~iA~~l~v~~~~l~~~~~~   79 (144)
                      ..||++||.+|+  |+||.+||+++|||.++|++||+|+ ..|++++|.+||++|||++++|+.....
T Consensus        13 ~~lG~~ir~~R~--~~t~~eLA~~~Gvs~~~ls~iE~G~~~~ps~~tl~kia~~L~v~~~~Ll~~~~~   78 (82)
T d2ofya1          13 QRLGELLRSARG--DMSMVTVAFDAGISVETLRKIETGRIATPAFFTIAAVARVLDLSLDDVAAVVTF   78 (82)
T ss_dssp             HHHHHHHHHHHT--TSCHHHHHHHHTCCHHHHHHHHTTCCSSCBHHHHHHHHHHTTCCHHHHHTTCCC
T ss_pred             HHHHHHHHHHHH--CCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCC
T ss_conf             999999999998--079999998971799999999829867888999999999989889999855478


SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Putative transcriptional regulator RHA1 ro04071
species: Rhodococcus sp. RHA1 [TaxId: 101510]