PSIBLAST alignment of GI: 254780424 and protein with PDB id: 3ivp

>gi|259090355|pdb|3IVP|A Chain A, The Structure Of A Possible Transposon-Related Dna-Binding Protein From Clostridium Difficile 630. Length = 126
>gi|259090356|pdb|3IVP|B Chain B, The Structure Of A Possible Transposon-Related Dna-Binding Protein From Clostridium Difficile 630. Length = 126
 Score = 46.7 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 5   KKIPNPVD-INVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHIS 63
           +K  +  D   +G  I+  R   G+++E++G  + I  + +   E          L  + 
Sbjct: 2   RKKEDKYDFRALGLAIKEARKKQGLTREQVGAXIEIDPRYLTNIENKGQHPSLQVLYDLV 61

Query: 64  EVLESPISFFFDVSPTVCSDISSEENNVMDFISTPDGLQLN 104
            +L   +  FF   P      S++   + + I       L 
Sbjct: 62  SLLNVSVDEFF--LPASSQVKSTKRRQLENKIDNFTDADLV 100