RPSBLAST alignment of GI: 254780424 and SCOP domain: d1y9qa1

Alignment

>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]} Length = 79

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 15/70 (21%), Positives = 32/70 (45%)

Query: 14 NVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFF 73
           +  +++  R   G+S +   +  G++   + + E+G +    + L  I+  LE+  S F
Sbjct: 8  QIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSAF 67

Query: 74 FDVSPTVCSD 83
          F   P + S 
Sbjct: 68 FANDPQLLSS 77

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Probable transcriptional regulator VC1968, N-terminal domain
domain: Probable transcriptional regulator VC1968, N-terminal domain
species: Vibrio cholerae [TaxId: 666]