HHsearch alignment for GI: 254780425 and conserved domain: PRK13287

Probab=99.83  E-value=5.1e-19  Score=142.41  Aligned_cols=229  Identities=14%  Similarity=0.145  Sum_probs=159.3

Q ss_pred             CCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHH---HH--------HHHH
Q ss_conf             655555321001244203-55543333578998754310133466861898312101100011---23--------4667
Q gi|254780425|r  237 KFEKISPVIRIVQPGINP-AIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVD---QP--------SILK  304 (518)
Q Consensus       237 ~~~~~~~~V~iVQpni~~-~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~---~~--------~~~~  304 (518)
T Consensus         8 ~~s~d~v~v~~vqy~~P~~~t~~ev~~n~~~I~~~v~~~-k~G~PgmDLvVFPEYSt~G~~~d~~~~~e~~~~ipGpet~   86 (333)
T PRK13287          8 NKPIEGVLVGLIQYPVPVVNSREDIDKQIEQIIKTVHKT-KAGYPGMDLIVFPEYSTQGLNTKKWTTEEFLCTVDGPEVD   86 (333)
T ss_pred             CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH-HCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf             789985699999527886689999999999999999997-5689997489802413466678734557776149977899


Q ss_pred             HHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf             76564107982420110012345575121000036732122111256334221331001000012111001222210135
Q gi|254780425|r  305 KIASVLKINQLLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYSSS  384 (518)
Q Consensus       305 ~l~~~~~~~~~li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~~g  384 (518)
T Consensus        87 ~f~~acr~~~vwgvfSi~E~-np~~~~pYNT~iLIn~~Geiv~kYRKi~P-----WvPiE~---------------W~PG  145 (333)
T PRK13287         87 AFAQACKENKVWGVFSIMER-NPDGNEPYNTAIIIDDQGEIILKYRKLHP-----WVPVEP---------------WEPG  145 (333)
T ss_pred             HHHHHHHHCCEEEEEEEEEE-CCCCCCCCEEEEEECCCCCEEEEEEECCC-----CCCCCC---------------CCCC
T ss_conf             99999997794899998887-68999863028998899818889982256-----556777---------------3589


Q ss_pred             CC-CCCEEECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC--
Q ss_conf             87-76200012200102221666558888512--69977999627755767628999999999999729919998559--
Q gi|254780425|r  385 DI-SPLLGLSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIIDDSGFMGSGTDHSFRYAQIQAVEIGLPLIRATNN--  459 (518)
Q Consensus       385 ~~-~~~~~~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd~Wf~~s~~~qH~~~a~~RAiE~~r~~vra~nt--  459 (518)
T Consensus       146 d~~~pV~dgPkG~KI~liIC~DG~fPEiaRe~A~kGAEviiR~~G---Ym~p~~~qw~~t~k~~A~~N~~yva~vn~~G~  222 (333)
T PRK13287        146 DLGIPVCDGPGGSKLAVCICHDGMFPEMAREAAYKGANVMIRISG---YSTQVNDQWILTNRSNAWQNLMYTASVNLAGY  222 (333)
T ss_pred             CCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEECC---CCCCHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_conf             865156546887578999975899818999987468879998357---65613567999999988862557999750256


Q ss_pred             -------CCCEEECCCCEEEEECCCCCCEEEEEEECCC
Q ss_conf             -------7046998998087773899827999996067
Q gi|254780425|r  460 -------GVSAFLDERGQIISSVYADRGASIDMHFQPK  490 (518)
Q Consensus       460 -------GiS~~id~~G~i~~~~~~~~~~~l~~~v~~~  490 (518)
T Consensus       223 Dgv~~yfG~s~i~~fDG~~L~~~~~~~~~i~~Ael~~~  260 (333)
T PRK13287        223 DGVFYYFGEGQVCNFDGTTLVQGHRNPWEIVTAEVRPD  260 (333)
T ss_pred             CCCEEEECCCEEECCCCCEEEECCCCCCCEEEEEECHH
T ss_conf             76414404616966788682104788882499996699