HHsearch alignment for GI: 254780425 and conserved domain: cd07197

>cd07197 nitrilase Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and
Probab=99.96  E-value=8e-29  Score=206.30  Aligned_cols=213  Identities=21%  Similarity=0.241  Sum_probs=158.9

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHH------------HHHHHHHHHHHHCC
Q ss_conf             100124420355543333578998754310133466861898312101100011------------23466776564107
Q gi|254780425|r  245 IRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVD------------QPSILKKIASVLKI  312 (518)
Q Consensus       245 V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~------------~~~~~~~l~~~~~~  312 (518)
T Consensus         1 IA~~Q~~~~~---~d~~~Nl~~i~~~i~~---A~~~gadlvv~PE~~l~Gy~~~~~~~~~~~~~~~~~~~~~~l~~~a~~   74 (253)
T cd07197           1 IAAVQLAPKI---GDVEANLAKALRLIKE---AAEQGADLIVLPELFLTGYSFESAKEDLDLAEELDGPTLEALAELAKE   74 (253)
T ss_pred             EEEEECCCCC---CCHHHHHHHHHHHHHH---HHHCCCCEEECCCCCCCCCCHHHHHHCHHHHHHCCCHHHHHHHHHHHH
T ss_conf             0999999876---8899999999999999---998859099958873035983565557766543772999999999988


Q ss_pred             CCE-EEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEE
Q ss_conf             982-4201100123455751210000367321221112563342213310010000121110012222101358776200
Q gi|254780425|r  313 NQL-LIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYSSSDISPLLG  391 (518)
Q Consensus       313 ~~~-li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~~g~~~~~~~  391 (518)
T Consensus        75 ~~i~i~~G~~e~----~~~~~yNs~~~i~~~G~~i~~y~K~~l~~~~E~~~------------------~~~G~~~~v~~  132 (253)
T cd07197          75 LGIYIVAGIAEK----DGDKLYNTAVVIDPDGEIIGKYRKIHLFDFGERRY------------------FSPGDEFPVFD  132 (253)
T ss_pred             CCCEEEEEEEEE----ECCEEEEEEEEECCCCCEEEEEEECCCCCCCHHHC------------------CCCCCCCEEEE
T ss_conf             097899736894----39988898999879986898887569999414203------------------37999754776


Q ss_pred             ECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC--------
Q ss_conf             012200102221666558888512--6997799962775576762899999999999972991999855970--------
Q gi|254780425|r  392 LSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIIDDSGFMGSGTDHSFRYAQIQAVEIGLPLIRATNNGV--------  461 (518)
Q Consensus       392 ~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd~Wf~~s~~~qH~~~a~~RAiE~~r~~vra~ntGi--------  461 (518)
T Consensus       133 -~~~~~ig~~IC~D~~~pe~~r~~~~~Ga~lil~psa--~~~-~~~~~~~~~~~arA~en~~~vv~~n~vG~~~~~~~~G  208 (253)
T cd07197         133 -TPGGKIGLLICYDLRFPELARELALKGADIILVPAA--WPT-ARREHWELLLRARAIENGVYVVAANRVGEEGGLEFAG  208 (253)
T ss_pred             -ECCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECC--CCC-CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
T ss_conf             -299689866720535779999999759999999267--899-8721456778888885497799976633689960446


Q ss_pred             -CEEECCCCEEEEECCCCCCEEEEEEECCC
Q ss_conf             -46998998087773899827999996067
Q gi|254780425|r  462 -SAFLDERGQIISSVYADRGASIDMHFQPK  490 (518)
Q Consensus       462 -S~~id~~G~i~~~~~~~~~~~l~~~v~~~  490 (518)
T Consensus       209 ~S~Ii~P~G~~l~~~~~-~e~~i~a~idl~  237 (253)
T cd07197         209 GSMIVDPDGEVLAEASE-EEGILVAELDLD  237 (253)
T ss_pred             EEEEECCCCCEEEECCC-CCEEEEEEECHH
T ss_conf             57999599829863599-982999997099