HHsearch alignment for GI: 254780425 and conserved domain: cd07197
>cd07197 nitrilase Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and
Probab=99.96 E-value=8e-29 Score=206.30 Aligned_cols=213 Identities=21% Similarity=0.241 Sum_probs=158.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHH------------HHHHHHHHHHHHCC
Q ss_conf 100124420355543333578998754310133466861898312101100011------------23466776564107
Q gi|254780425|r 245 IRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVD------------QPSILKKIASVLKI 312 (518)
Q Consensus 245 V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~------------~~~~~~~l~~~~~~ 312 (518)
T Consensus 1 IA~~Q~~~~~---~d~~~Nl~~i~~~i~~---A~~~gadlvv~PE~~l~Gy~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 74 (253)
T cd07197 1 IAAVQLAPKI---GDVEANLAKALRLIKE---AAEQGADLIVLPELFLTGYSFESAKEDLDLAEELDGPTLEALAELAKE 74 (253)
T ss_pred EEEEECCCCC---CCHHHHHHHHHHHHHH---HHHCCCCEEECCCCCCCCCCHHHHHHCHHHHHHCCCHHHHHHHHHHHH
T ss_conf 0999999876---8899999999999999---998859099958873035983565557766543772999999999988
Q ss_pred CCE-EEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEE
Q ss_conf 982-4201100123455751210000367321221112563342213310010000121110012222101358776200
Q gi|254780425|r 313 NQL-LIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYSSSDISPLLG 391 (518)
Q Consensus 313 ~~~-li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~~g~~~~~~~ 391 (518)
T Consensus 75 ~~i~i~~G~~e~----~~~~~yNs~~~i~~~G~~i~~y~K~~l~~~~E~~~------------------~~~G~~~~v~~ 132 (253)
T cd07197 75 LGIYIVAGIAEK----DGDKLYNTAVVIDPDGEIIGKYRKIHLFDFGERRY------------------FSPGDEFPVFD 132 (253)
T ss_pred CCCEEEEEEEEE----ECCEEEEEEEEECCCCCEEEEEEECCCCCCCHHHC------------------CCCCCCCEEEE
T ss_conf 097899736894----39988898999879986898887569999414203------------------37999754776
Q ss_pred ECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC--------
Q ss_conf 012200102221666558888512--6997799962775576762899999999999972991999855970--------
Q gi|254780425|r 392 LSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIIDDSGFMGSGTDHSFRYAQIQAVEIGLPLIRATNNGV-------- 461 (518)
Q Consensus 392 ~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd~Wf~~s~~~qH~~~a~~RAiE~~r~~vra~ntGi-------- 461 (518)
T Consensus 133 -~~~~~ig~~IC~D~~~pe~~r~~~~~Ga~lil~psa--~~~-~~~~~~~~~~~arA~en~~~vv~~n~vG~~~~~~~~G 208 (253)
T cd07197 133 -TPGGKIGLLICYDLRFPELARELALKGADIILVPAA--WPT-ARREHWELLLRARAIENGVYVVAANRVGEEGGLEFAG 208 (253)
T ss_pred -ECCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECC--CCC-CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
T ss_conf -299689866720535779999999759999999267--899-8721456778888885497799976633689960446
Q ss_pred -CEEECCCCEEEEECCCCCCEEEEEEECCC
Q ss_conf -46998998087773899827999996067
Q gi|254780425|r 462 -SAFLDERGQIISSVYADRGASIDMHFQPK 490 (518)
Q Consensus 462 -S~~id~~G~i~~~~~~~~~~~l~~~v~~~ 490 (518)
T Consensus 209 ~S~Ii~P~G~~l~~~~~-~e~~i~a~idl~ 237 (253)
T cd07197 209 GSMIVDPDGEVLAEASE-EEGILVAELDLD 237 (253)
T ss_pred EEEEECCCCCEEEECCC-CCEEEEEEECHH
T ss_conf 57999599829863599-982999997099