HHsearch alignment for GI: 254780425 and conserved domain: cd07575
>cd07575 Xc-1258_like Xanthomonas campestris XC1258 and related proteins, members of the nitrilase superfamily (putative class 13 nitrilases). Uncharacterized subgroup belonging to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup either represents a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. XC1258 is a homotetramer.
Probab=99.95 E-value=5.3e-27 Score=194.43 Aligned_cols=216 Identities=14% Similarity=0.153 Sum_probs=154.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC-H-------HHHHHHHHHHHHHHCCCC
Q ss_conf 32100124420355543333578998754310133466861898312101100-0-------112346677656410798
Q gi|254780425|r 243 PVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFS-I-------VDQPSILKKIASVLKINQ 314 (518)
Q Consensus 243 ~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~-~-------~~~~~~~~~l~~~~~~~~ 314 (518)
T Consensus 1 mkial~Q~~~~~~d---~e~Nl~~~~~~i~~---a-~~~adlivfPEl~~tGy~~~~~~~ae~~~~~~~~~l~~~A~~~~ 73 (252)
T cd07575 1 LKIALIQTDLVWED---PEANLAHFEEKIEQ---L-KEKTDLIVLPEMFTTGFSMNAEALAEPMNGPTLQWMKAQAKKKG 73 (252)
T ss_pred CEEEEEECCCCCCC---HHHHHHHHHHHHHH---H-HCCCCEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCC
T ss_conf 98999966788799---99999999999999---8-66999999988655689989688463578889999999997569
Q ss_pred EEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE-HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEC
Q ss_conf 242011001234557512100003673212211125633422-1331001000012111001222210135877620001
Q gi|254780425|r 315 LLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVP-FAEYLPYRNILKKLNLDFYMFPLDYSSSDISPLLGLS 393 (518)
Q Consensus 315 ~li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVP-FGEyiP~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~ 393 (518)
T Consensus 74 i~i~g~~~~~~---~~~~yNta~~i~~~G~i-~~YrK~hL~~~~~E------------------~~~f~~G~~~~v~~-~ 130 (252)
T cd07575 74 AAITGSLIIKE---GGKYYNRLYFVTPDGEV-YHYDKRHLFRMAGE------------------HKVYTAGNERVIVE-Y 130 (252)
T ss_pred CEEEEEEEEEE---CCEEEEEEEEEECCCEE-EEEEEEECCCCCCC------------------CCCCCCCCCCEEEE-E
T ss_conf 88999999987---99589999999199669-99802766998886------------------60003898657998-5
Q ss_pred CCCEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHH-HHHHHHHHHCCCEEEEEECC----------CCC
Q ss_conf 2200102221666558888512699779996277557676289999-99999999729919998559----------704
Q gi|254780425|r 394 EKLRLYPLLFSDALFHQDINNLENVSAILNIIDDSGFMGSGTDHSF-RYAQIQAVEIGLPLIRATNN----------GVS 462 (518)
Q Consensus 394 ~~~~~~~~ICyE~~f~~~~r~~~~a~~lvn~tNd~Wf~~s~~~qH~-~~a~~RAiE~~r~~vra~nt----------GiS 462 (518)
T Consensus 131 ~g~riGl~ICyDl~FPe~~R~~~~~dil~~~a~--~-P~~-~~~~w~~l~~aRA~eN~~~vv~~N~~G~~~~~~~~~G~S 206 (252)
T cd07575 131 KGWKILLQVCYDLRFPVWSRNTNDYDLLLYVAN--W-PAP-RRAAWDTLLKARAIENQAYVIGVNRVGTDGNGLEYSGDS 206 (252)
T ss_pred CCEEEEEEEECCCCCHHHHHHHCCCCEEEEEEC--C-CCC-CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEE
T ss_conf 896677788646576799875347874798714--8-763-168999999999997497699965666689998884247
Q ss_pred EEECCCCEEEEECCCCCCEEEEEEECCCCCC
Q ss_conf 6998998087773899827999996067687
Q gi|254780425|r 463 AFLDERGQIISSVYADRGASIDMHFQPKVRD 493 (518)
Q Consensus 463 ~~id~~G~i~~~~~~~~~~~l~~~v~~~~~~ 493 (518)
T Consensus 207 ~Iv~P~G~ila~a~~-~e~~~~a~iD~~~i~ 236 (252)
T cd07575 207 AVIDPLGEPLAEAEE-DEGVLTATLDKEALQ 236 (252)
T ss_pred EEECCCCCEEEECCC-CCEEEEEEECHHHHH
T ss_conf 999999778797799-985999996589999