HHsearch alignment of GI: 254780425 and MMDB domain: 1j31_A_
>1j31_A (A:) Hypothetical protein PH0642; alpha-beta-BETA-alpha sandwich, structural genomics, unknown function; 1.60A {Pyrococcus horikoshii OT3}
Probab=99.97 E-value=1.2e-29 Score=211.34 Aligned_cols=220 Identities=12% Similarity=0.044 Sum_probs=166.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHH-------------HHHHHHHHHH
Q ss_conf 321001244203555433335789987543101334668618983121011000112-------------3466776564
Q gi|254780425|r 243 PVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVDQ-------------PSILKKIASV 309 (518)
Q Consensus 243 ~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~~-------------~~~~~~l~~~ 309 (518)
++|+++|+|+++.++ ++..+++.++.+ ++.+.++|+|||||.+++.+.... ....+.+.+.
T Consensus 2 mria~~Q~~~~~~~~---~~n~~~i~~~i~---~A~~~gadlivfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 75 (262)
T 1j31_A 2 VKVGYIQXEPKILEL---DKNYSKAEKLIK---EASKEGAKLVVLPELFDTGYNFESREEVFDVAQQIPEGETTTFLXEL 75 (262)
T ss_dssp EEEEEEECCCCTTCH---HHHHHHHHHHHH---HHHHTTCSEEECCTTTTTCSCCSSHHHHHTTCBCTTTSHHHHHHHHH
T ss_pred EEEEEEECCCCCCCH---HHHHHHHHHHHH---HHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 799999789987799---999999999999---99988998999488765678602367888766643798999999999
Q ss_pred HCC-CCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 107-9824201100123455751210000367321221112563342213310010000121110012222101358776
Q gi|254780425|r 310 LKI-NQLLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYSSSDISP 388 (518)
Q Consensus 310 ~~~-~~~li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~~g~~~~ 388 (518)
+++ +..+++|....+ +++.||++++++++|++..+|+|+++.+..|+.. .+|....
T Consensus 76 a~~~~~~i~~G~~~~~----~~~~~n~~~~~~~~g~~~~~~~k~~~~~~~~~~~-------------------~~~~~~~ 132 (262)
T 1j31_A 76 ARELGLYIVAGTAEKS----GNYLYNSAVVVGPRGYIGKYRKIHLFYREKVFFE-------------------PGDLGFK 132 (262)
T ss_dssp HHHHTCEEEEEEEEEE----TTEEEEEEEEEETTEEEEEEECSSCCTTHHHHCC-------------------CCCSCSC
T ss_pred HHHCCEEEEEEEEEEC----CCCCCCCEEEEEECCEEEEEEEECCCCCCCEEEC-------------------CCCCCCE
T ss_conf 9980928997666612----7534320179984437888500214656622577-------------------8998855
Q ss_pred CEEECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE---------
Q ss_conf 200012200102221666558888512--699779996277557676289999999999997299199985---------
Q gi|254780425|r 389 LLGLSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIIDDSGFMGSGTDHSFRYAQIQAVEIGLPLIRAT--------- 457 (518)
Q Consensus 389 ~~~~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd~Wf~~s~~~qH~~~a~~RAiE~~r~~vra~--------- 457 (518)
.+ ..++.+++..||||..||+..|.+ +|+++++++||+++. ||...+|.||+|++.++|.++
T Consensus 133 ~~-~~~~~~ig~~IC~d~~~p~~~~~~~~~g~diil~ps~~~~~------~~~~~~~~~A~e~~~~vv~~n~~g~~~~~~ 205 (262)
T 1j31_A 133 VF-DIGFAKVGVXICFDWFFPESARTLALKGAEIIAHPANLVXP------YAPRAXPIRALENRVYTITADRVGEERGLK 205 (262)
T ss_dssp EE-ECSSCEEEECCGGGGGSHHHHHHHHHTTCSEEEEECCCCSS------CHHHHHHHHHHHHTCEEEEECCCSEETTEE
T ss_pred EE-EECCCEEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCCHH------HHHHHHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 89-96896699996244247189999987445617741546336------565568888763587599996555468954
Q ss_pred CCCCCEEECCCCEEEEECCCCCCEEEEEEECCCCCCCHHHH
Q ss_conf 59704699899808777389982799999606768768786
Q gi|254780425|r 458 NNGVSAFLDERGQIISSVYADRGASIDMHFQPKVRDSFRSS 498 (518)
Q Consensus 458 ntGiS~~id~~G~i~~~~~~~~~~~l~~~v~~~~~~T~y~~ 498 (518)
++|.|+++||+|+++++++.++++++.+++.+....+.+.|
T Consensus 206 ~~G~S~ii~p~G~~~~~~~~~~~~~i~~did~~~~~~~~~~ 246 (262)
T 1j31_A 206 FIGKSLIASPKAEVLSIASETEEEIGVVEIDLNLARNKRLN 246 (262)
T ss_dssp CCCCCEEECTTSCEEEECCSSCCEEEEEEECHHHHHCCEEE
T ss_pred CCCCCEEEECCCCEEEECCCCCCEEEEEEEECHHHHHHHHH
T ss_conf 35677899099988987589987799999984698999875