HHsearch alignment of GI: 254780425 and MMDB domain: 3hkx_A_
>3hkx_A (A:) Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich, hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=1.8e-32 Score=229.71 Aligned_cols=237 Identities=17% Similarity=0.100 Sum_probs=180.9
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHH----------HHHHH
Q ss_conf 66555553210012442035554333357899875431013346686189831210110001123----------46677
Q gi|254780425|r 236 LKFEKISPVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVDQP----------SILKK 305 (518)
Q Consensus 236 ~~~~~~~~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~~~----------~~~~~ 305 (518)
......+++|+++|+|+++.++. +..++..++.+ ++.+.++|+|||||.+++.+..++. ...+.
T Consensus 14 ~~~~~~~~kva~~Q~~~~~~~~~---~n~~~i~~~~~---~a~~~~adlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~ 87 (283)
T 3hkx_A 14 LVIRGSHMRIALMQHTARPLDPQ---HNLDLIDDAAA---RASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSR 87 (283)
T ss_dssp SCCTTEEEEEEEEEBCCCTTCHH---HHHHHHHHHHH---HHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHH
T ss_pred CEEECCCCEEEEEECCCCCCCHH---HHHHHHHHHHH---HHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHH
T ss_conf 45507987899998889889999---99999999999---9998879799958775568984787644202106899999
Q ss_pred HHHHHCCCCE-EEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 6564107982-420110012345575121000036732122111256334221331001000012111001222210135
Q gi|254780425|r 306 IASVLKINQL-LIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYSSS 384 (518)
Q Consensus 306 l~~~~~~~~~-li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~~g 384 (518)
+.+.+++++. ++.|..... ++.++||+.++++++|+....|+|.++.++.|... .+.+|
T Consensus 88 l~~~a~~~~~~i~~g~~~~~---~~~~~~n~~~v~~~~g~~~~~~~k~~~~~~~~~~~-----------------~~~~g 147 (283)
T 3hkx_A 88 LRGIARDRGIALVWSLPGPE---GPEQRGITAELADEHGEVLASYQKVQLYGPEEKAA-----------------FVPGE 147 (283)
T ss_dssp HHHHHHHTTSEEEECCBCSS---CTTTCCBEEEEECTTSCEEEEEECSSCCHHHHHHH-----------------SCCCC
T ss_pred HHHHHHHCCCEEEEEEEEEE---CCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCE-----------------ECCCC
T ss_conf 99999982988999778983---78624799999956995898981663412354302-----------------31478
Q ss_pred CCCCCEEECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE-----
Q ss_conf 8776200012200102221666558888512--699779996277557676289999999999997299199985-----
Q gi|254780425|r 385 DISPLLGLSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIIDDSGFMGSGTDHSFRYAQIQAVEIGLPLIRAT----- 457 (518)
Q Consensus 385 ~~~~~~~~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd~Wf~~s~~~qH~~~a~~RAiE~~r~~vra~----- 457 (518)
....++. .++.+++.+||||..||+..|.+ +|++++++++++.+. .+++|..+++.||+||++++++|+
T Consensus 148 ~~~~~~~-~~~~~ig~~IC~D~~~pe~~~~~~~~g~dil~~~s~~~~~---~~~~~~~~~~~rA~e~~~~vv~~n~~G~~ 223 (283)
T 3hkx_A 148 QPPPVLS-WGGRQLSLLVCYDVEFPEMVRAAAARGAQLVLVPTALAGD---ETSVPGILLPARAVENGITLAYANHCGPE 223 (283)
T ss_dssp SCCCEEE-ETTEEEEECCGGGGGSHHHHHHHHHTTCSEEEEECCCBSC---CTHHHHTHHHHHHHHHTCEEEEECBEEEE
T ss_pred CCCCCCE-EECCEECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCC---CCCCCHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf 5542111-1010113543444347599999973778789991578898---64211016788998646842997510058
Q ss_pred ----CCCCCEEECCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf ----5970469989980877738998279999960676876878655689
Q gi|254780425|r 458 ----NNGVSAFLDERGQIISSVYADRGASIDMHFQPKVRDSFRSSIQMRV 503 (518)
Q Consensus 458 ----ntGiS~~id~~G~i~~~~~~~~~~~l~~~v~~~~~~T~y~~~g~~~ 503 (518)
+.|.|++|||+|+++++.+.+ ++++.+++++...+|.|.+++.|.
T Consensus 224 ~~~~~~G~S~vi~p~G~~~~~~~~~-e~~l~~~id~~~~~~~r~~~~~~~ 272 (283)
T 3hkx_A 224 GGLVFDGGSVVVGPAGQPLGELGVE-PGLLVVDLPDQSQDAGSDSADYLQ 272 (283)
T ss_dssp TTEEEECCCEEECTTSCEEEECCSS-CEEEEEEEEC----------CHHH
T ss_pred CCEEEECCEEEECCCCCEEEECCCC-CEEEEEEECHHHHHHHHHHCCHHH
T ss_conf 9907714069992999899985899-859999976999999998498567