HHsearch alignment for GI: 254780426 and conserved domain: COG2524

Probab=99.39  E-value=1.3e-12  Score=102.53  Aligned_cols=130  Identities=17%  Similarity=0.305  Sum_probs=116.8

Q ss_pred             HHHHHCCCCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCC
Q ss_conf             99873047757641312001299986301036778979865981799841886642241029999987662235643223
Q gi|254780426|r   78 FNNILRFRKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNIN  157 (320)
Q Consensus        78 i~~vl~l~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~  157 (320)
T Consensus       163 i~~m~siPk~~V~~~~s~--~~i~v~~d~tl~eaak~f~~~~i~GaPVvd~d--k~vGiit~~dI~~aia~g~~------  232 (294)
T COG2524         163 ISKMVSIPKEKVKNLMSK--KLITVRPDDTLREAAKLFYEKGIRGAPVVDDD--KIVGIITLSDIAKAIANGNL------  232 (294)
T ss_pred             EEEEEECCCCHHHHHCCC--CCEEECCCCCHHHHHHHHHHCCCCCCCEECCC--CEEEEEEHHHHHHHHHCCCC------
T ss_conf             743264573026662667--84676688639999999997286678510289--45899988999999976896------


Q ss_pred             CCCCCCHHHHCCC-CEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHH
Q ss_conf             3345767885156-57971788512323432013565116540776620466758899998742
Q gi|254780426|r  158 LNIQLSESNLIKN-ILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVLMRD  220 (320)
Q Consensus       158 ~~~~~~l~~~~r~-~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ivGe  220 (320)
T Consensus       233 ---~~kV~~~M~k~vitI~eDe~i~dAir~M~~~nVGRLlV~ds~gkpvGiITrTDIL~~ia~~  293 (294)
T COG2524         233 ---DAKVSDYMRKNVITINEDEDIYDAIRLMNKNNVGRLLVTDSNGKPVGIITRTDILTRIAGL  293 (294)
T ss_pred             ---CCCHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHCC
T ss_conf             ---5438887505770475730499999998763864699984699678788557888886436