HHsearch alignment for GI: 254780426 and conserved domain: COG2905
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms].
Probab=98.71 E-value=6.6e-08 Score=71.67 Aligned_cols=124 Identities=19% Similarity=0.242 Sum_probs=100.4
Q ss_pred CCCCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 04775764131200129998630103677897986598179984188664224102999998766223564322333457
Q gi|254780426|r 83 RFRKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNINLNIQL 162 (320)
Q Consensus 83 ~l~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~ 162 (320)
T Consensus 145 e~~~trv~~~~~--~~~~~v~~~~~i~~aa~km~~~gv~s~v~l~~~~-~~~GIvT~~dl~~~v~~~g~-------~~~~ 214 (610)
T COG2905 145 EFILTRVGEVKT--LPAVTVSPQASIQDAARKMKDEGVSSLVVLDDSG-PLLGIVTRKDLRSRVIADGR-------SKTQ 214 (610)
T ss_pred HHHHHHHHHHHC--CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCC-CCCCEEEHHHHHHHHHHCCC-------CCCC
T ss_conf 588998777741--7875268657679999999960887289983798-74332422777899986589-------7423
Q ss_pred CHHHHC-CCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHH
Q ss_conf 678851-5657971788512323432013565116540776620466758899998
Q gi|254780426|r 163 SESNLI-KNILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVL 217 (320)
Q Consensus 163 ~l~~~~-r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~i 217 (320)
T Consensus 215 ~V~evmT~p~~svd~~~~~feAml~m~r~~I~hl~V~-e~gq~~Gilt~~dIl~l~ 269 (610)
T COG2905 215 KVSEVMTSPVISVDRGDFLFEAMLMMLRNRIKHLPVT-EDGQPLGILTLTDILRLF 269 (610)
T ss_pred CHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEHHHHHHHH
T ss_conf 3545414684454476569999999998077442361-189046776699999761