HHsearch alignment for GI: 254780426 and conserved domain: COG3620

>COG3620 Predicted transcriptional regulator with C-terminal CBS domains [Transcription].
Probab=98.93  E-value=5.5e-09  Score=78.76  Aligned_cols=141  Identities=16%  Similarity=0.247  Sum_probs=104.3

Q ss_pred             HCCCCCHHHHH---HHHHHHCC--CCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHH
Q ss_conf             76898989999---99987304--77576413120012999863010367789798659817998418866422410299
Q gi|254780426|r   66 LEGIFSETEKE---IFNNILRF--RKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMR  140 (320)
Q Consensus        66 ~~G~i~~~E~~---ii~~vl~l--~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~k  140 (320)
T Consensus        39 E~G~vdPrlSt~k~Il~aL~e~e~~~ita~~iM~--spvv~v~pdDsi~~vv~lM~~~g~SQlPVi~~--~k~VGsItE~  114 (187)
T COG3620          39 EAGKVDPRLSTVKRILEALEEAEKTRITAKTIMH--SPVVSVSPDDSISDVVNLMRDKGISQLPVIEE--DKVVGSITEN  114 (187)
T ss_pred             HCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHCC--CCEEEECCHHHHHHHHHHHHHCCCCCCCEEEC--CEEEEEECHH
T ss_conf             6388793089999999999985466675766535--87058772466999999999759752754108--8645331498


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCHHHHCCC-CEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHH
Q ss_conf             999876622356432233345767885156-5797178851232343201356511654077662046675889999874
Q gi|254780426|r  141 DVISYISHMYAKTNNINLNIQLSESNLIKN-ILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVLMR  219 (320)
Q Consensus       141 Dll~~~~~~~~~~~~~~~~~~~~l~~~~r~-~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ivG  219 (320)
T Consensus       115 ~iv~~~le~~e~------i~~~~vr~vM~e~fP~Vs~~~~l~vI~~LL~~~~---AVlV~e~G~~vGIITk~DI~k~~~~  185 (187)
T COG3620         115 DIVRALLEGMES------IRSLRVREVMGEPFPTVSPDESLNVISQLLEEHP---AVLVVENGKVVGIITKADIMKLLAG  185 (187)
T ss_pred             HHHHHHHCCCCC------HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC---EEEEEECCCEEEEEEHHHHHHHHHC
T ss_conf             999997304221------2112189885588876799998799999984198---3899868936888759999998724