HHsearch alignment for GI: 254780426 and conserved domain: COG4109

Probab=96.30  E-value=0.0036  Score=40.62  Aligned_cols=118  Identities=18%  Similarity=0.305  Sum_probs=85.5

Q ss_pred             CCHHHHCCC---CEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHCCCC-CCC
Q ss_conf             767885156---5797178851232343201356511654077662046675889999874222100000000124-677
Q gi|254780426|r  162 LSESNLIKN---ILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVLMRDITSEHHSKKSMISA-VSD  237 (320)
Q Consensus       162 ~~l~~~~r~---~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ivGei~de~d~~~~~i~~-~~~  237 (320)
T Consensus       188 ~~Vedi~~P~~~~~yL~~~d~v~d~~~l~~kt~~sRfPVvn~~~kvvGvVt~rDv~~~~------~~t----~ieKVMtk  257 (432)
T COG4109         188 ITVEDIMTPLEDTSYLRETDTVEDWLDLVEKTGHSRFPVVNRSMKVVGVVTMRDVLDKK------PST----TIEKVMTK  257 (432)
T ss_pred             EEHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEECCCCEEEEEEEEHHHHCCC------CCC----CHHHHHCC
T ss_conf             55877446443432324645099999999971987341331442699999834644479------986----17777426


Q ss_pred             CEEEEECCCCHHHHHHHHCCCC-CCCCCCCCCCCHHHHH--------HHHHCCCCCCCCEE
Q ss_conf             3378304535999999828888-8777746743179999--------99842347379889
Q gi|254780426|r  238 NTFIVDARTDLEELAKIIGTDC-NCLKGEQDVDSLGGLI--------FSVLDRIPARGEVV  289 (320)
Q Consensus       238 g~~~v~G~~~l~~l~~~l~~~l-~~~~~~~~~~Ti~G~i--------~~~l~~iP~~Ge~v  289 (320)
T Consensus       258 np~tv~~~tsVAsvaq~MiwE~iem~PVv~~n~~llGiitR~dvlk~lq~~q~qpqvget~  318 (432)
T COG4109         258 NPITVRAKTSVASVAQMMIWEGIEMLPVVDSNNTLLGIITRQDVLKSLQMIQRQPQVGETI  318 (432)
T ss_pred             CCEEECCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCH
T ss_conf             9755425226889988887645526568837861898988999999998751288655447