HHsearch alignment for GI: 254780426 and conserved domain: TIGR01137
>TIGR01137 cysta_beta cystathionine beta-synthase; InterPro: IPR005857 This model discriminates cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain from cysteine synthases. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid - the function of many of these enzymes is unproven.; GO: 0004122 cystathionine beta-synthase activity, 0019343 cysteine biosynthetic process via cystathionine, 0005737 cytoplasm.
Probab=93.11 E-value=0.13 Score=30.36 Aligned_cols=90 Identities=17% Similarity=0.240 Sum_probs=65.4
Q ss_pred CCCCEEECCCCCHHHHHHHHHCCCCCCEEEEE--------CCCCCEEEEEHHHHHHHHHHHHHHHCCC-H--HHCCCCCC
Q ss_conf 15657971788512323432013565116540--------7766204667588999987422210000-0--00012467
Q gi|254780426|r 168 IKNILFVPSSMLVSDLLTNIQESRIRMALVID--------EHGGTDGLVSYEDIVSVLMRDITSEHHS-K--KSMISAVS 236 (320)
Q Consensus 168 ~r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvD--------E~G~~~GiVTleDIle~ivGei~de~d~-~--~~~i~~~~ 236 (320)
T Consensus 373 L~~~v~~~~t~tv~~ai~iLre~GfdQ~PVv~pga~~P~veag~v~G~v~l~~lL~~l~~~~a~~~D~v~Gkyldfk~~~ 452 (527)
T TIGR01137 373 LPALVTVHPTETVGDAIEILREYGFDQLPVVKPGAAEPDVEAGKVLGSVTLRELLSALFAKKAKLEDAVSGKYLDFKVMS 452 (527)
T ss_pred CCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 88734546764089999999974873076207788889723534788742677899998424675544343000344453
Q ss_pred ---------------CCEEEEECCCCHHHHHHHHCC
Q ss_conf ---------------733783045359999998288
Q gi|254780426|r 237 ---------------DNTFIVDARTDLEELAKIIGT 257 (320)
Q Consensus 237 ---------------~g~~~v~G~~~l~~l~~~l~~ 257 (320)
T Consensus 453 ~Fndvssynenk~~~~~~~~i~~~~~l~~L~~~le~ 488 (527)
T TIGR01137 453 RFNDVSSYNENKSKKKKFIQIGEGEKLADLSKFLEK 488 (527)
T ss_pred HHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 210100010102467676544677518999998516