HHsearch alignment for GI: 254780426 and conserved domain: cd04603
>cd04603 CBS_pair_KefB_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the KefB (Kef-type K+ transport systems) domain which is involved in inorganic ion transport and metabolism. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.24 E-value=5.2e-11 Score=92.01 Aligned_cols=108 Identities=19% Similarity=0.246 Sum_probs=92.6
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC-CCCEEECC
Q ss_conf 29998630103677897986598179984188664224102999998766223564322333457678851-56579717
Q gi|254780426|r 98 SINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNINLNIQLSESNLI-KNILFVPS 176 (320)
Q Consensus 98 ~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~~l~~~~-r~~~~Vpe 176 (320)
T Consensus 2 ~pvtv~~~~~L~~a~~~~~e~~~~~i~VVD~~~-k~vG~it~~Dll~~~~~~~---------~~~~V~d~m~~~v~~i~~ 71 (111)
T cd04603 2 QTVSVNCENPLREAIKMINELGARAVVVVDEEN-KVLGQVTLSDLLEIGPNDY---------ETLKVCEVYIVPVPIVYC 71 (111)
T ss_pred CCEEECCCCCHHHHHHHHHHCCCCEEEEECCCC-CEEEEEEHHHHHHHCHHHH---------HCCCHHHHHCCCCCCCCC
T ss_conf 446865999599999999876997689988999-6889988999864384455---------324387751567746389
Q ss_pred CCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHH
Q ss_conf 885123234320135651165407766204667588999
Q gi|254780426|r 177 SMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVS 215 (320)
Q Consensus 177 ~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle 215 (320)
T Consensus 72 ~~~v~dalr~~~~~~~~~l~VVD~~grlvGiI~~rdlLr 110 (111)
T cd04603 72 DSKVTDLLRIFRETEPPVVAVVDKEGKLVGTIYERELLR 110 (111)
T ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHC
T ss_conf 976899999987449988999938997999996255123