HHsearch alignment for GI: 254780426 and conserved domain: cd04606
>cd04606 CBS_pair_Mg_transporter This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE. MgtE and its homologs are found in eubacteria, archaebacteria, and eukaryota. Members of this family transport Mg2+ or other divalent cations into the cell via two highly conserved aspartates. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.29 E-value=1.3e-11 Score=96.04 Aligned_cols=102 Identities=19% Similarity=0.302 Sum_probs=88.8
Q ss_pred EEECCCHHHHHHHHHHCC-----CCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC-CCEEEC
Q ss_conf 863010367789798659-----81799841886642241029999987662235643223334576788515-657971
Q gi|254780426|r 102 VEDKATVYEAMLMFEKYG-----RSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNINLNIQLSESNLIK-NILFVP 175 (320)
Q Consensus 102 i~~~~~~~e~~~~i~~~~-----~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~~l~~~~r-~~~~Vp 175 (320)
T Consensus 2 ~~~~~TV~eai~~lr~~~~~~~~~~~i~Vvd~~~-~l~G~vt~~dll~~-------------~~~~~v~~iM~~~~~~v~ 67 (109)
T cd04606 2 VREDWTVGEALEYLRRNADDPETIYYIYVVDEEG-RLLGVVSLRDLLLA-------------DPDTPVSDIMDTDVISVS 67 (109)
T ss_pred CCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCC-EEEEEEEHHHHHHC-------------CCCCCHHHHHCCCEEECC
T ss_conf 6998899999999985188856177999997999-79999986772241-------------888716663002136337
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHH
Q ss_conf 788512323432013565116540776620466758899998
Q gi|254780426|r 176 SSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVL 217 (320)
Q Consensus 176 e~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~i 217 (320)
T Consensus 68 ~~~~~~~a~~~m~~~~~~~lPVVd~~~~lvGiIt~~Di~~~~ 109 (109)
T cd04606 68 ADDDQEEVARLFEKYDLLALPVVDEEGRLVGIITVDDVIDVI 109 (109)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHC
T ss_conf 999899999999985276046898899799999968968449