HHsearch alignment for GI: 254780426 and conserved domain: cd04607
>cd04607 CBS_pair_NTP_transferase_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain associated with the NTP (Nucleotidyl transferase) domain downstream. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=97.76 E-value=0.00011 Score=50.45 Aligned_cols=82 Identities=24% Similarity=0.393 Sum_probs=52.9
Q ss_pred CCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCHH
Q ss_conf 65797178851232343201356511654077662046675889999874222100000000124677337830453599
Q gi|254780426|r 170 NILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVLMRDITSEHHSKKSMISAVSDNTFIVDARTDLE 249 (320)
Q Consensus 170 ~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ivGei~de~d~~~~~i~~~~~g~~~v~G~~~l~ 249 (320)
T Consensus 3 kpi~v~~~~tl~ea~~~m~~~~~~~~~Vvd~~~~l~GiiT~~Di~r~l~~~~~~--~~~v~~im--~~~~~~i~~~~~~~ 78 (113)
T cd04607 3 KQLLVSPDASILDALRKIDKNALRIVLVVDENGRLLGTVTDGDIRRALLKGLSL--DDPVSEVM--NRNPITAKVGSSRE 78 (113)
T ss_pred CCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEECHHHHHHHHCCCCC--CCCHHHHH--CCEEEEEECCCCHH
T ss_conf 688969949899999999875997899997999599999872776687628984--56156752--12129998799899
Q ss_pred HHHHHH
Q ss_conf 999982
Q gi|254780426|r 250 ELAKII 255 (320)
Q Consensus 250 ~l~~~l 255 (320)
T Consensus 79 ~a~~~m 84 (113)
T cd04607 79 EILALM 84 (113)
T ss_pred HHHHHH
T ss_conf 999999