HHsearch alignment for GI: 254780426 and conserved domain: cd04610
>cd04610 CBS_pair_ParBc_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a ParBc (ParB-like nuclease) domain downstream. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=97.82 E-value=1.3e-05 Score=56.57 Aligned_cols=45 Identities=27% Similarity=0.417 Sum_probs=28.3
Q ss_pred CCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHH
Q ss_conf 5657971788512323432013565116540776620466758899
Q gi|254780426|r 169 KNILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIV 214 (320)
Q Consensus 169 r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIl 214 (320)
T Consensus 2 kdvvtv~~d~tv~ea~~~m~~~~~~~~pVvd-~~~lvGivt~~Dll 46 (107)
T cd04610 2 RDVITVSPDNTVKDVIKLIKETGHDGFPVVD-NGKVVGIVSARDLL 46 (107)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEEE-CCEEEEEEEHHHHC
T ss_conf 8809989929599999999975997899998-99999988764531