HHsearch alignment for GI: 254780426 and conserved domain: cd04618

>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=97.88  E-value=7.5e-05  Score=51.66  Aligned_cols=94  Identities=17%  Similarity=0.218  Sum_probs=83.5

Q ss_pred             EEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEECCC
Q ss_conf             29998630103677897986598179984188664224102999998766223564322333457678851565797178
Q gi|254780426|r   98 SINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNINLNIQLSESNLIKNILFVPSS  177 (320)
Q Consensus        98 ~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~~l~~~~r~~~~Vpe~  177 (320)
T Consensus         2 kliV~D~~l~vk~Af~al~~ngi~~aplWds~~~~fvGmLt~~DfI~il~-----------------------lv~i~P~   58 (98)
T cd04618           2 KLVVFDTKLPVKKAFNALVENGIRSAPLWDSRKQQFVGMLTITDFILILR-----------------------LVSIHPE   58 (98)
T ss_pred             EEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEHHHHHHHHH-----------------------HEECCCC
T ss_conf             09999489758999999998692699987288767888864799998876-----------------------2444876


Q ss_pred             CCHHHHHHHHHCCCCCCEEEEECC-CCCEEEEEHHHHH
Q ss_conf             851232343201356511654077-6620466758899
Q gi|254780426|r  178 MLVSDLLTNIQESRIRMALVIDEH-GGTDGLVSYEDIV  214 (320)
Q Consensus       178 ~~l~~lL~~m~~~~~~~aiVvDE~-G~~~GiVTleDIl  214 (320)
T Consensus        59 ~sL~da~~~l~~~~ihrlPvid~~~~~~~~ilt~~~il   96 (98)
T cd04618          59 RSLFDAALLLLKNKIHRLPVIDPSTGTGLYILTSRRIL   96 (98)
T ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEHEE
T ss_conf             12999999998678750521647999658999630201