HHsearch alignment for GI: 254780426 and conserved domain: cd04619

>cd04619 CBS_pair_6 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=99.44  E-value=1e-12  Score=103.16  Aligned_cols=111  Identities=14%  Similarity=0.226  Sum_probs=97.6

Q ss_pred             EEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC-CCCEEECC
Q ss_conf             29998630103677897986598179984188664224102999998766223564322333457678851-56579717
Q gi|254780426|r   98 SINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNINLNIQLSESNLI-KNILFVPS  176 (320)
Q Consensus        98 ~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~~l~~~~-r~~~~Vpe  176 (320)
T Consensus         2 rvitV~~~~ti~eA~~~M~~~~ig~l~Vvd~~g-~lvGIiTe~Di~r~~~~~~~~------~~~~~V~~vMt~~vitv~~   74 (114)
T cd04619           2 RLAKIDVNATLQRAAKILGEPGIDLVVVCDPHG-KLAGVLTKTDVVRQMGRCGGP------GCTAPVENVMTRAVVSCRP   74 (114)
T ss_pred             CEEEECCCCCHHHHHHHHHHCCCCEEEEECCCC-EEEEEEEHHHHHHHHHHCCCC------CCCCCHHHHCCCCCEEECC
T ss_conf             312989869399999999874998899998999-599999949999998730798------6678999961589889999


Q ss_pred             CCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHH
Q ss_conf             885123234320135651165407766204667588999
Q gi|254780426|r  177 SMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVS  215 (320)
Q Consensus       177 ~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle  215 (320)
T Consensus        75 ~~~i~~a~~~M~~~~i~~lPVVD~~~~~vGiit~~Dilk  113 (114)
T cd04619          75 GDLLHDVWQVMKQRGLKNIPVVDENARPLGVLNARDALK  113 (114)
T ss_pred             CCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHEEC
T ss_conf             890999999888769858899907995999999354542