HHsearch alignment for GI: 254780426 and conserved domain: cd04626
>cd04626 CBS_pair_13 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.09 E-value=3.1e-06 Score=60.67 Aligned_cols=56 Identities=20% Similarity=0.357 Sum_probs=37.7
Q ss_pred CCCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHH
Q ss_conf 477576413120012999863010367789798659817998418866422410299999
Q gi|254780426|r 84 FRKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVI 143 (320)
Q Consensus 84 l~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll 143 (320)
T Consensus 54 ~~~~~V~~iMt--~~~itv~~~~~~~~a~~~M~~~~i~~LPVvd~~--klvGiit~~Dil 109 (111)
T cd04626 54 FLEKKVFNIVS--QDVFYVNEEDTIDEALDIMREKQIGRLPVVDDN--KLIGVVRTKDIL 109 (111)
T ss_pred CCCCCHHHHCC--CCCEEECCCCCHHHHHHHHHHHCCCEEEEEECC--EEEEEEEHHHHC
T ss_conf 77888899606--998799997939999999998099889999999--999999969814