HHsearch alignment for GI: 254780426 and conserved domain: cd04627
>cd04627 CBS_pair_14 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.48 E-value=3.2e-13 Score=106.50 Aligned_cols=115 Identities=14% Similarity=0.241 Sum_probs=94.6
Q ss_pred EEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHH--HH-CCCCEEEC
Q ss_conf 9998630103677897986598179984188664224102999998766223564322333457678--85-15657971
Q gi|254780426|r 99 INAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNINLNIQLSES--NL-IKNILFVP 175 (320)
Q Consensus 99 i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~~l~--~~-~r~~~~Vp 175 (320)
T Consensus 3 fi~v~~~~sl~~a~~lm~~~~i~rlpVvd~~~g~lvGIiT~~dil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~viti~ 82 (123)
T cd04627 3 FIPVPSTASLFQAIEILGSGGIHRVAVTEEESGEVIGILSQRRLVEFLWENARSFPGLDPLYPIPLRDLTIGTSDVISIN 82 (123)
T ss_pred CEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCEEEC
T ss_conf 64848989299999999749977799995899949999997999999986376566144541120023323767717989
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHH
Q ss_conf 78851232343201356511654077662046675889
Q gi|254780426|r 176 SSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDI 213 (320)
Q Consensus 176 e~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDI 213 (320)
T Consensus 83 ~d~~l~~A~~lM~~~~i~~lpVVD~~g~lvGiiS~~Dl 120 (123)
T cd04627 83 GDQPLIDALHLMHNEGISSVAVVDNQGNLIGNISVTDV 120 (123)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHE
T ss_conf 99959999999998098878698599969999892542