HHsearch alignment for GI: 254780426 and conserved domain: cd04637
>cd04637 CBS_pair_24 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.48 E-value=3.5e-13 Score=106.21 Aligned_cols=117 Identities=19% Similarity=0.278 Sum_probs=98.1
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCC---CCCCCCCCCHHHHC-CCCE
Q ss_conf 1299986301036778979865981799841886642241029999987662235643---22333457678851-5657
Q gi|254780426|r 97 VSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTN---NINLNIQLSESNLI-KNIL 172 (320)
Q Consensus 97 ~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~---~~~~~~~~~l~~~~-r~~~ 172 (320)
T Consensus 1 T~viTv~p~~tl~~a~~~m~~~~i~~lpVvd~~--~lvGivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~iM~~~~i 78 (122)
T cd04637 1 TRVVTVEMDDRLEEVREIFEKHKFHHLLVVEDN--ELVGVISDRDYLKAISPFLGTAGETEKDLATLNRRAHQIMTRDPI 78 (122)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECC--EEEEEEEHHHHHHHHHHCCCCCHHHHCCCHHHCCCHHHHCCCCCE
T ss_conf 974998896969999999987499889999899--999998889999875002453102211212306899994638983
Q ss_pred EECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHH
Q ss_conf 9717885123234320135651165407766204667588999
Q gi|254780426|r 173 FVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVS 215 (320)
Q Consensus 173 ~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle 215 (320)
T Consensus 79 tv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~lvGiIT~~Diik 121 (122)
T cd04637 79 TVSPDTPVDEASKLLLENSISCLPVVDENGQLIGIITWKDLLK 121 (122)
T ss_pred EECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHC
T ss_conf 9999984999999999749308999968998999999688327