HHsearch alignment for GI: 254780426 and conserved domain: cd04803
>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.05 E-value=2.7e-05 Score=54.52 Aligned_cols=53 Identities=21% Similarity=0.358 Sum_probs=48.0
Q ss_pred CCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHH
Q ss_conf 56579717885123234320135651165407766204667588999987422
Q gi|254780426|r 169 KNILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVLMRDI 221 (320)
Q Consensus 169 r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ivGei 221 (320)
T Consensus 1 sPvvtv~~~~tl~~a~~~m~~~~i~~lpVvd~~~~lvGiit~~Dil~~~~~~~ 53 (122)
T cd04803 1 SPVVTLSEDDSLADAEELMREHRIRHLPVVNEDGKLVGLLTQRDLLRAALSSL 53 (122)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHHCC
T ss_conf 99199989699999999999749978999908986888965999999998437