HHsearch alignment of GI: 254780427 and MMDB domain: 1tvi_A_

>1tvi_A (A:) Hypothetical UPF0054 protein TM1509; alpha + beta, mixed 4-stranded beta sheet, four helix bundle, structural genomics; NMR {Thermotoga maritima}
Probab=100.00  E-value=1.4e-45  Score=283.97  Aligned_cols=146  Identities=27%  Similarity=0.413  Sum_probs=121.2

Q ss_pred             CCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             35430588885485211113525799999999999974322014667438999985779999999998504898515663
Q gi|254780427|r    7 NLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF   86 (171)
Q Consensus         7 ~~~~i~I~i~ie~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eisi~l~dd~~i~~LN~~yr~kd~~TDVLSF   86 (171)
                      .+.++.|+|..+...+....        .+.+++..++...    .+.++|||.|||+++|++||++|||+|+|||||||
T Consensus        18 ~~~~~~I~i~n~~~~~~~~~--------~~~~~~~~~l~~~----~~~~eisi~fvd~~~i~~LN~~yr~kd~pTDVLSF   85 (172)
T 1tvi_A           18 YFQGHMIRILGEGKGSKLLE--------NLKEKLEEIVKKE----IGDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTF   85 (172)
T ss_dssp             -----CCEEEECSTTHHHHH--------HSHHHHHHHHHHH----TSCCCCEEEECCHHHHHHHHHTTTCCCCCCSEECC
T ss_pred             EHHHCCHHHHCCCHHHHHHH--------HHHHHHHHHHHHH----CCCEEEEEEEECHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             11010022206762899999--------9999999999854----48769999999989999999999479987664775


Q ss_pred             CCCCCCCCCCCCCCHHEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC-HHHHHHHHHHHHHHHHHC---
Q ss_conf             2556677765653002046518888744666189899999999999899863888998-899999999999999986---
Q gi|254780427|r   87 PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDL---  162 (171)
Q Consensus        87 P~~~~~~~~~~~~~LGDIvIs~~~i~~eA~~~~~~~~~e~~~l~iHG~LHLlGydH~~-~~~~~~M~~~E~~iL~~l---  162 (171)
                      |+.+       ..+|||||||+++|.+||.++++++.+|++++++||+|||+||||++ ++++.+|+.+|+++|+++   
T Consensus        86 p~~e-------~~~lGDI~Is~e~v~~qA~e~~~~~~~el~~l~iHGiLHLlGyDH~~~~~e~~~M~~~E~~iL~~l~~~  158 (172)
T 1tvi_A           86 PLME-------EDVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEFEDKNSKEMFEKQKKYVEEVWGE  158 (172)
T ss_dssp             CCCS-------SSCCSEEEECHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSCSSCCTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCC-------CCCCCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             0455-------555666656589999999995751999999999999999718888998689999999999999999841


Q ss_pred             CCCCCCCCC
Q ss_conf             888864479
Q gi|254780427|r  163 GINDPYEVD  171 (171)
Q Consensus       163 ~i~~PY~~~  171 (171)
                      |++|||.++
T Consensus       159 ~~~np~~~~  167 (172)
T 1tvi_A          159 WRSNPSEDS  167 (172)
T ss_dssp             HTTSCSCSC
T ss_pred             CCCCCCCCC
T ss_conf             888976678