BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780427|ref|YP_003064840.1| hypothetical protein
CLIBASIA_01560 [Candidatus Liberibacter asiaticus str. psy62]
         (171 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780427|ref|YP_003064840.1| hypothetical protein CLIBASIA_01560 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040104|gb|ACT56900.1| hypothetical protein CLIBASIA_01560 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 171

 Score =  346 bits (888), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV
Sbjct: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK
Sbjct: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD
Sbjct: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171


>gi|315122127|ref|YP_004062616.1| hypothetical protein CKC_01885 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495529|gb|ADR52128.1| hypothetical protein CKC_01885 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 163

 Score =  221 bits (562), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 113/166 (68%), Positives = 136/166 (81%), Gaps = 3/166 (1%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +N P+L+L IAVE+ LWG++  L  LCEVV AKA+S L SK  F  E+I E+S VFTDS+
Sbjct: 1   MNPPKLNLHIAVESELWGEDFDLSVLCEVVLAKAISFLTSKKDFSLEDI-EVSFVFTDSN 59

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           RI+ LN +YRGIDKPTNVLSFP+  +S    S  MLGDIVLAYE++E EANVLGK+F++H
Sbjct: 60  RIKELNAQYRGIDKPTNVLSFPSVLSSE--YSGAMLGDIVLAYEVMEAEANVLGKKFKDH 117

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           LVHLIIHGFLHLL YDHVDD+DA +MEGLERSIL DLGI+DPYE+D
Sbjct: 118 LVHLIIHGFLHLLRYDHVDDEDARLMEGLERSILADLGIDDPYELD 163


>gi|227820630|ref|YP_002824600.1| hypothetical protein NGR_c00430 [Sinorhizobium fredii NGR234]
 gi|254799468|sp|C3MF10|RRMF_RHISN RecName: Full=Probable rRNA maturation factor
 gi|227339629|gb|ACP23847.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 173

 Score =  149 bits (377), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/160 (49%), Positives = 101/160 (63%), Gaps = 3/160 (1%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS--KGYFVKENIVELSLVFTDSHRIE 68
           LD+QI+VE   W  E  L+ L   +    V+ LI+  K  F  ++  ELSLVFTD   I 
Sbjct: 4   LDIQISVEEGDWPSEDELQGLSTRILDVTVAFLIAEEKQPF-PDDPPELSLVFTDDQSIR 62

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+R  DKPTNVLSFP    +       MLGDI++AYE +E EA  + K FE HL H
Sbjct: 63  EINAEWRNQDKPTNVLSFPAFPVTPGNMPGPMLGDIIVAYETLEREAAEMEKPFEEHLTH 122

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L++HGFLHL GYDH++D +A  MEGLE  IL  LG++DPY
Sbjct: 123 LLVHGFLHLFGYDHIEDDEAERMEGLETRILARLGLSDPY 162


>gi|153008092|ref|YP_001369307.1| hypothetical protein Oant_0756 [Ochrobactrum anthropi ATCC 49188]
 gi|166228855|sp|A6WWX4|RRMF_OCHA4 RecName: Full=Probable rRNA maturation factor
 gi|151559980|gb|ABS13478.1| protein of unknown function UPF0054 [Ochrobactrum anthropi ATCC
           49188]
          Length = 162

 Score =  149 bits (377), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 94/158 (59%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I VE   W DE  L  L       A +NL      +K    ELS+VFTD   I+TLN 
Sbjct: 8   IDIMVEAGNWPDETALEGLVRKSVEAAWANL-----GLKSAASELSVVFTDDASIQTLNA 62

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DKPTNVLSFP     +      MLGDI++A E +E EA   GK  ENHL HL++H
Sbjct: 63  EWRGKDKPTNVLSFPAFPVKAGAQPGPMLGDIIIARETVEREAREEGKPLENHLAHLVVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GFLHLLGYDH  D +A VMEG ER IL  L I DPY V
Sbjct: 123 GFLHLLGYDHETDAEAEVMEGREREILHALAIPDPYAV 160


>gi|150395270|ref|YP_001325737.1| hypothetical protein Smed_0042 [Sinorhizobium medicae WSM419]
 gi|166227780|sp|A6U5H2|RRMF_SINMW RecName: Full=Probable rRNA maturation factor
 gi|150026785|gb|ABR58902.1| protein of unknown function UPF0054 [Sinorhizobium medicae WSM419]
          Length = 168

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/159 (49%), Positives = 99/159 (62%), Gaps = 1/159 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE   W  E  L++  EVV   A   L   +   +     ELSLVFTD   I+ 
Sbjct: 4   LDIQISVEAGDWPPEDELQSFSEVVLEAAADFLAREERQPLSAEAAELSLVFTDDQSIKA 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+RG DKPTNVLSFP    +      LMLGDIV+A+E +  EA  L K F+ HL HL
Sbjct: 64  INAEWRGQDKPTNVLSFPAFPVTPGKMPGLMLGDIVVAHETLRREAAELEKPFDAHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HGFLHL GYDH++D +A  ME LE  IL  LG++DPY
Sbjct: 124 LVHGFLHLFGYDHIEDDEAERMERLETRILARLGLSDPY 162


>gi|86356031|ref|YP_467923.1| hypothetical protein RHE_CH00374 [Rhizobium etli CFN 42]
 gi|123513247|sp|Q2KD90|RRMF_RHIEC RecName: Full=Probable rRNA maturation factor
 gi|86280133|gb|ABC89196.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 171

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/161 (49%), Positives = 101/161 (62%), Gaps = 3/161 (1%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           LD+QI++E+  W  E  L   CE V   A   L    K  F K    E+SLVFTD   I+
Sbjct: 4   LDIQISIEDIGWPGEETLLVFCERVLGAAAIYLRDNEKQPFPK-MPPEVSLVFTDDASIQ 62

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+RG DKPTNVLSFP            MLGDI++A E +E EA  L K F++HL H
Sbjct: 63  DINAEWRGKDKPTNVLSFPAFPVQRGKVPGPMLGDIIIARETVEREAQELEKSFDDHLTH 122

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           L++HGFLHLLGYDH+++ +A  MEGLE  IL  LG++DPYE
Sbjct: 123 LLVHGFLHLLGYDHMNNAEAETMEGLETRILAQLGLSDPYE 163


>gi|15964160|ref|NP_384513.1| hypothetical protein SMc01113 [Sinorhizobium meliloti 1021]
 gi|307301305|ref|ZP_07581067.1| protein of unknown function UPF0054 [Sinorhizobium meliloti BL225C]
 gi|307317976|ref|ZP_07597413.1| protein of unknown function UPF0054 [Sinorhizobium meliloti AK83]
 gi|26006908|sp|Q92SI5|RRMF_RHIME RecName: Full=Probable rRNA maturation factor
 gi|15073336|emb|CAC41844.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306896378|gb|EFN27127.1| protein of unknown function UPF0054 [Sinorhizobium meliloti AK83]
 gi|306903761|gb|EFN34348.1| protein of unknown function UPF0054 [Sinorhizobium meliloti BL225C]
          Length = 168

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 77/159 (48%), Positives = 97/159 (61%), Gaps = 1/159 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE   W  E  L++ CE V   A   L   +   +     ELSLVFTD   I  
Sbjct: 4   LDIQISVEAGDWPPEDELQSFCERVLEAAADFLAREENQPLPAQAAELSLVFTDDQSIRA 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+RG DK TNVLSFP    +       MLGDIV+A+E +  EA  L K F+ HL HL
Sbjct: 64  INAEWRGQDKATNVLSFPAFPVTPGRMPGPMLGDIVVAHETLRREAAELEKPFDAHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HGFLHL GYDH++D +A  MEGLE  IL  LG++DPY
Sbjct: 124 LVHGFLHLFGYDHIEDDEAERMEGLETRILARLGLSDPY 162


>gi|189025205|ref|YP_001935973.1| Diacyglycerol kinase [Brucella abortus S19]
 gi|237816495|ref|ZP_04595488.1| conserved hypothetical protein [Brucella abortus str. 2308 A]
 gi|189020777|gb|ACD73499.1| Diacyglycerol kinase [Brucella abortus S19]
 gi|237788562|gb|EEP62777.1| conserved hypothetical protein [Brucella abortus str. 2308 A]
          Length = 190

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN 
Sbjct: 30  IDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLLNG 84

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL++H
Sbjct: 85  EWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVH 144

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 145 GFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 182


>gi|306843573|ref|ZP_07476174.1| conserved hypothetical protein [Brucella sp. BO1]
 gi|306276264|gb|EFM57964.1| conserved hypothetical protein [Brucella sp. BO1]
          Length = 195

 Score =  147 bits (370), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN 
Sbjct: 35  IDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLLNG 89

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL++H
Sbjct: 90  EWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVH 149

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 150 GFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 187


>gi|241202783|ref|YP_002973879.1| hypothetical protein Rleg_0029 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856673|gb|ACS54340.1| protein of unknown function UPF0054 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 171

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 79/161 (49%), Positives = 101/161 (62%), Gaps = 1/161 (0%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIE 68
            LD+QI+VE+  W  E  L + CE V   AV  L  S+         E+SLVFTD   I+
Sbjct: 3   ELDIQISVEDIGWPGEETLLSFCERVLGAAVVYLSDSEKQPFPTLPPEVSLVFTDDASIQ 62

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+RG DK TNVLSFP            MLGDI++A E +E EA  L K F++HL H
Sbjct: 63  DINAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETLEREAAELEKSFDDHLTH 122

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           L++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 123 LLVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 163


>gi|239833204|ref|ZP_04681533.1| conserved hypothetical protein [Ochrobactrum intermedium LMG 3301]
 gi|239825471|gb|EEQ97039.1| conserved hypothetical protein [Ochrobactrum intermedium LMG 3301]
          Length = 162

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E   W +E  L  L       A SNL      +K    ELS+VFTD   I+TLN 
Sbjct: 8   IDIMIEAGNWQEENALEGLVRKSVEAAWSNL-----GLKSAASELSVVFTDDASIQTLNA 62

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DKPTNVLSFP     +      MLGDI++A E +E EA   GK  ENHLVHL++H
Sbjct: 63  EWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIIIARETVEREALEEGKPLENHLVHLVVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GFLHLLGYDH  D +A VMEG ER IL  L I DPY V
Sbjct: 123 GFLHLLGYDHETDAEAEVMEGREREILHALAIPDPYAV 160


>gi|17988257|ref|NP_540891.1| diacyglycerol kinase [Brucella melitensis bv. 1 str. 16M]
 gi|161620064|ref|YP_001593951.1| hypothetical protein BCAN_A2198 [Brucella canis ATCC 23365]
 gi|163844169|ref|YP_001628574.1| hypothetical protein BSUIS_A1993 [Brucella suis ATCC 23445]
 gi|225626522|ref|ZP_03784561.1| conserved hypothetical protein [Brucella ceti str. Cudo]
 gi|225853581|ref|YP_002733814.1| hypothetical protein BMEA_A2215 [Brucella melitensis ATCC 23457]
 gi|254690287|ref|ZP_05153541.1| Diacyglycerol kinase [Brucella abortus bv. 6 str. 870]
 gi|254694775|ref|ZP_05156603.1| Diacyglycerol kinase [Brucella abortus bv. 3 str. Tulya]
 gi|254696403|ref|ZP_05158231.1| Diacyglycerol kinase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700785|ref|ZP_05162613.1| Diacyglycerol kinase [Brucella suis bv. 5 str. 513]
 gi|254705154|ref|ZP_05166982.1| Diacyglycerol kinase [Brucella suis bv. 3 str. 686]
 gi|254707329|ref|ZP_05169157.1| Diacyglycerol kinase [Brucella pinnipedialis M163/99/10]
 gi|254709130|ref|ZP_05170941.1| Diacyglycerol kinase [Brucella pinnipedialis B2/94]
 gi|254713445|ref|ZP_05175256.1| Diacyglycerol kinase [Brucella ceti M644/93/1]
 gi|254716199|ref|ZP_05178010.1| Diacyglycerol kinase [Brucella ceti M13/05/1]
 gi|254731316|ref|ZP_05189894.1| Diacyglycerol kinase [Brucella abortus bv. 4 str. 292]
 gi|256030655|ref|ZP_05444269.1| Diacyglycerol kinase [Brucella pinnipedialis M292/94/1]
 gi|256045759|ref|ZP_05448637.1| Diacyglycerol kinase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060116|ref|ZP_05450298.1| Diacyglycerol kinase [Brucella neotomae 5K33]
 gi|256112478|ref|ZP_05453399.1| Diacyglycerol kinase [Brucella melitensis bv. 3 str. Ether]
 gi|256158657|ref|ZP_05456540.1| Diacyglycerol kinase [Brucella ceti M490/95/1]
 gi|256254061|ref|ZP_05459597.1| Diacyglycerol kinase [Brucella ceti B1/94]
 gi|256258540|ref|ZP_05464076.1| Diacyglycerol kinase [Brucella abortus bv. 9 str. C68]
 gi|260169559|ref|ZP_05756370.1| Diacyglycerol kinase [Brucella sp. F5/99]
 gi|260755827|ref|ZP_05868175.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260759050|ref|ZP_05871398.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260760775|ref|ZP_05873118.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884852|ref|ZP_05896466.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261215102|ref|ZP_05929383.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261217973|ref|ZP_05932254.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221202|ref|ZP_05935483.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261314811|ref|ZP_05954008.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261316630|ref|ZP_05955827.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261321177|ref|ZP_05960374.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261324093|ref|ZP_05963290.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261751294|ref|ZP_05995003.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261755859|ref|ZP_05999568.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|265987702|ref|ZP_06100259.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265992176|ref|ZP_06104733.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993914|ref|ZP_06106471.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265997163|ref|ZP_06109720.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|294851380|ref|ZP_06792053.1| metalloprotease [Brucella sp. NVSL 07-0026]
 gi|54040443|sp|P67133|RRMF_BRUSU RecName: Full=Probable rRNA maturation factor
 gi|54042632|sp|P67132|RRMF_BRUME RecName: Full=Probable rRNA maturation factor
 gi|145572768|sp|Q57AA9|RRMF_BRUAB RecName: Full=Probable rRNA maturation factor
 gi|145572769|sp|Q2YQS6|RRMF_BRUA2 RecName: Full=Probable rRNA maturation factor
 gi|189039424|sp|B0CK02|RRMF_BRUSI RecName: Full=Probable rRNA maturation factor
 gi|189039776|sp|A9M9Y5|RRMF_BRUC2 RecName: Full=Probable rRNA maturation factor
 gi|254801689|sp|C0RG38|RRMF_BRUMB RecName: Full=Probable rRNA maturation factor
 gi|17984025|gb|AAL53155.1| diacyglycerol kinase [Brucella melitensis bv. 1 str. 16M]
 gi|161336875|gb|ABX63180.1| conserved hypothetical protein [Brucella canis ATCC 23365]
 gi|163674892|gb|ABY39003.1| conserved hypothetical protein [Brucella suis ATCC 23445]
 gi|225618179|gb|EEH15222.1| conserved hypothetical protein [Brucella ceti str. Cudo]
 gi|225641946|gb|ACO01860.1| conserved hypothetical protein [Brucella melitensis ATCC 23457]
 gi|260669368|gb|EEX56308.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671207|gb|EEX58028.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675935|gb|EEX62756.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260874380|gb|EEX81449.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260916709|gb|EEX83570.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260919786|gb|EEX86439.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260923062|gb|EEX89630.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261293867|gb|EEX97363.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261295853|gb|EEX99349.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261300073|gb|EEY03570.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261303837|gb|EEY07334.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261741047|gb|EEY28973.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261745612|gb|EEY33538.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262551631|gb|EEZ07621.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|262764895|gb|EEZ10816.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003242|gb|EEZ15535.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|264659899|gb|EEZ30160.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294819969|gb|EFG36968.1| metalloprotease [Brucella sp. NVSL 07-0026]
 gi|326410154|gb|ADZ67219.1| diacylglycerol kinase [Brucella melitensis M28]
 gi|326539872|gb|ADZ88087.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 168

 Score =  146 bits (369), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN 
Sbjct: 8   IDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLLNG 62

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL++H
Sbjct: 63  EWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 123 GFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 160


>gi|62290993|ref|YP_222786.1| hypothetical protein BruAb1_2129 [Brucella abortus bv. 1 str.
           9-941]
 gi|260546256|ref|ZP_05821996.1| diacylglycerol kinase [Brucella abortus NCTC 8038]
 gi|260563055|ref|ZP_05833541.1| diacylglycerol kinase [Brucella melitensis bv. 1 str. 16M]
 gi|260567377|ref|ZP_05837847.1| diacylglycerol kinase [Brucella suis bv. 4 str. 40]
 gi|261759087|ref|ZP_06002796.1| diacylglycerol kinase [Brucella sp. F5/99]
 gi|265999239|ref|ZP_05465467.2| diacylglycerol kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|297247379|ref|ZP_06931097.1| diacylglycerol kinase [Brucella abortus bv. 5 str. B3196]
 gi|62197125|gb|AAX75425.1| conserved hypothetical protein TIGR00043 [Brucella abortus bv. 1
           str. 9-941]
 gi|260096363|gb|EEW80239.1| diacylglycerol kinase [Brucella abortus NCTC 8038]
 gi|260153071|gb|EEW88163.1| diacylglycerol kinase [Brucella melitensis bv. 1 str. 16M]
 gi|260156895|gb|EEW91975.1| diacylglycerol kinase [Brucella suis bv. 4 str. 40]
 gi|261739071|gb|EEY27067.1| diacylglycerol kinase [Brucella sp. F5/99]
 gi|263092809|gb|EEZ16984.1| diacylglycerol kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|297174548|gb|EFH33895.1| diacylglycerol kinase [Brucella abortus bv. 5 str. B3196]
          Length = 171

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN 
Sbjct: 11  IDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLLNG 65

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL++H
Sbjct: 66  EWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVH 125

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 126 GFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 163


>gi|306842736|ref|ZP_07475378.1| conserved hypothetical protein [Brucella sp. BO2]
 gi|306287080|gb|EFM58585.1| conserved hypothetical protein [Brucella sp. BO2]
          Length = 158

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/154 (51%), Positives = 93/154 (60%), Gaps = 5/154 (3%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN E+RG
Sbjct: 2   IEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQVLNGEWRG 56

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL++HGFLH
Sbjct: 57  KDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVHGFLH 116

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           LLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 117 LLGYDHETDEEAEVMEAREREILHALAIPDPYAV 150


>gi|190890044|ref|YP_001976586.1| hypothetical protein RHECIAT_CH0000414 [Rhizobium etli CIAT 652]
 gi|238692546|sp|B3PZB4|RRMF_RHIE6 RecName: Full=Probable rRNA maturation factor
 gi|190695323|gb|ACE89408.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 171

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 102/160 (63%), Gaps = 1/160 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLC-EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI++EN  W +E  L   C  V+ A AV    S+         E+SLVFTD   I+ 
Sbjct: 4   LDIQISIENIGWPEEETLLAFCGRVLGAAAVYLRDSEKQPFPTMPPEVSLVFTDDASIQD 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+RG DK TNVLSFP            MLGDI++A E +E EA+ L K F++HL HL
Sbjct: 64  INAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETVEREAHELEKSFDDHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 124 LVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 163


>gi|116250162|ref|YP_766000.1| hypothetical protein RL0393 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|145558823|sp|Q1MMB8|RRMF_RHIL3 RecName: Full=Probable rRNA maturation factor
 gi|115254810|emb|CAK05884.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 171

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 100/160 (62%), Gaps = 1/160 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE+  W  E  L + CE V   A   L  S+         E+SLVFTD   I+ 
Sbjct: 4   LDIQISVEDIGWPGEETLLSFCERVLGAAAVYLRDSEKQPFPTMAPEVSLVFTDDASIQD 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+RG DK TNVLSFP            MLGDI++A E +E EA  L K F++HL HL
Sbjct: 64  INAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETLEREAAELEKSFDDHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 124 LVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 163


>gi|23503004|ref|NP_699131.1| hypothetical protein BR2156 [Brucella suis 1330]
 gi|82700902|ref|YP_415476.1| hypothetical protein BAB1_2156 [Brucella melitensis biovar Abortus
           2308]
 gi|148560239|ref|YP_001259950.1| hypothetical protein BOV_2068 [Brucella ovis ATCC 25840]
 gi|256370551|ref|YP_003108062.1| metal-dependent hydrolase [Brucella microti CCM 4915]
 gi|23349044|gb|AAN31046.1| conserved hypothetical protein TIGR00043 [Brucella suis 1330]
 gi|82617003|emb|CAJ12112.1| Protein of unknown function UPF0054 [Brucella melitensis biovar
           Abortus 2308]
 gi|148371496|gb|ABQ61475.1| conserved hypothetical protein TIGR00043 [Brucella ovis ATCC 25840]
 gi|256000714|gb|ACU49113.1| metal-dependent hydrolase [Brucella microti CCM 4915]
          Length = 158

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/154 (51%), Positives = 93/154 (60%), Gaps = 5/154 (3%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN E+RG
Sbjct: 2   IEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLLNGEWRG 56

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL++HGFLH
Sbjct: 57  KDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVHGFLH 116

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           LLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 117 LLGYDHETDEEAEVMEAREREILHALAIPDPYAV 150


>gi|306837707|ref|ZP_07470576.1| conserved hypothetical protein [Brucella sp. NF 2653]
 gi|306407265|gb|EFM63475.1| conserved hypothetical protein [Brucella sp. NF 2653]
          Length = 195

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/158 (50%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN 
Sbjct: 35  IDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLLNG 89

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DKPTNVLSFP     +      +LGDIV+A E +E EA   GK  ENHL HL++H
Sbjct: 90  EWRGKDKPTNVLSFPAFPVKAGSQPGPLLGDIVIARETVEREAKEEGKPIENHLSHLVVH 149

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 150 GFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 187


>gi|327188595|gb|EGE55805.1| hypothetical protein RHECNPAF_850041 [Rhizobium etli CNPAF512]
          Length = 171

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/161 (48%), Positives = 102/161 (63%), Gaps = 1/161 (0%)

Query: 10  RLDLQIAVENALWGDEIHLRTLC-EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LD+QI++EN  W +E  L   C  V+ A AV    S+         E+SLVFTD   I+
Sbjct: 3   ELDIQISIENIGWPEEETLLAFCGHVLGAAAVYLRDSEKQPFPTLPPEVSLVFTDDASIQ 62

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+RG DK TNVLSFP            MLGDI++A E +E EA+ L K F++HL H
Sbjct: 63  DINAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETVEREAHELEKSFDDHLTH 122

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           L++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 123 LLVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 163


>gi|254718193|ref|ZP_05180004.1| Diacyglycerol kinase [Brucella sp. 83/13]
 gi|265983151|ref|ZP_06095886.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|264661743|gb|EEZ32004.1| conserved hypothetical protein [Brucella sp. 83/13]
          Length = 168

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/158 (50%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN 
Sbjct: 8   IDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLLNG 62

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DKPTNVLSFP     +      +LGDIV+A E +E EA   GK  ENHL HL++H
Sbjct: 63  EWRGKDKPTNVLSFPAFPVKAGSQPGPLLGDIVIARETVEREAKEEGKPIENHLSHLVVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 123 GFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 160


>gi|222147353|ref|YP_002548310.1| hypothetical protein Avi_0440 [Agrobacterium vitis S4]
 gi|254803905|sp|B9JZJ4|RRMF_AGRVS RecName: Full=Probable rRNA maturation factor
 gi|221734343|gb|ACM35306.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 167

 Score =  143 bits (360), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 95/159 (59%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +LD+QIA+E   W DE  L  L   +   A   + ++G        E+SLVFT    I+ 
Sbjct: 3   KLDVQIAIEADGWPDEAELEALSTRILDHAADFIAAEGQPFAPMPAEVSLVFTGDTEIQA 62

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+RG DKPTNVLSFP            MLGDIV+A + +E EA  L K   +HL HL
Sbjct: 63  INSEWRGQDKPTNVLSFPAYPIEPGDKPGPMLGDIVIARQTVEREAAELEKTITDHLTHL 122

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HGFLHL GYDH+ + +A  MEGLE  IL  LG++DPY
Sbjct: 123 MVHGFLHLFGYDHMTEDEAEEMEGLETRILAGLGLSDPY 161


>gi|209547629|ref|YP_002279546.1| hypothetical protein Rleg2_0017 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226701630|sp|B5ZMX9|RRMF_RHILW RecName: Full=Probable rRNA maturation factor
 gi|209533385|gb|ACI53320.1| protein of unknown function UPF0054 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 171

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/160 (48%), Positives = 100/160 (62%), Gaps = 1/160 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI+V++  W  E  L + CE V   AV  L  S+         E+SLVFTD   I+ 
Sbjct: 4   LDIQISVDDIGWPGEETLLSFCERVLGAAVIYLRDSEKQPFPTMPPEVSLVFTDDASIQD 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+RG DK TNVLSFP            MLGDI++A E +E E   L K F++HL HL
Sbjct: 64  INAEWRGKDKATNVLSFPAFPVRPGKMPGPMLGDIIIARETVERETIELEKSFDDHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 124 LVHGFLHLLGYDHMNSDEAEIMEGLETRILAQLGLSDPYE 163


>gi|299133382|ref|ZP_07026577.1| protein of unknown function UPF0054 [Afipia sp. 1NLS2]
 gi|298593519|gb|EFI53719.1| protein of unknown function UPF0054 [Afipia sp. 1NLS2]
          Length = 164

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/137 (52%), Positives = 85/137 (62%), Gaps = 1/137 (0%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E V  +A++   S      E+  E++++ TD  RI  LN E+R  DK TNVLSFP A  
Sbjct: 22  AEAVIQRAIAAAASFVELPAED-TEVAVMLTDDARIRELNKEWRDQDKATNVLSFPAAQP 80

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                  LMLGDI +AYE    EA   GK F+NHL HL IHGFLHLLGYDH+DD +A  M
Sbjct: 81  PGATPQPLMLGDIAIAYETTRFEAETEGKPFQNHLSHLAIHGFLHLLGYDHLDDDEAEEM 140

Query: 152 EGLERSILEDLGINDPY 168
           EGLER IL  LGI DPY
Sbjct: 141 EGLERDILAKLGIADPY 157


>gi|222084695|ref|YP_002543224.1| hypothetical protein Arad_0658 [Agrobacterium radiobacter K84]
 gi|221722143|gb|ACM25299.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 169

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 99/160 (61%), Gaps = 3/160 (1%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS--KGYFVKENIVELSLVFTDSHRIE 68
           LD+QI+VE   W  E  L+ L E V   A + L    K  F K   +E+SLVFTD   I 
Sbjct: 5   LDIQISVEEGDWPSEDVLQALAERVLGVAAAYLKKNEKQPFPK-TALEVSLVFTDDAAIR 63

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+R  DK TNVLSFP       G    MLGDI++A E +E EA  L K F++HL H
Sbjct: 64  EINAEWREQDKATNVLSFPAFPLVPGGKPGPMLGDIIIARETVEREAVELEKSFDDHLTH 123

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L++HGFLHL GYDH+++ +A  MEGLE  IL  LG++DPY
Sbjct: 124 LMVHGFLHLFGYDHMNNSEAERMEGLETRILAGLGLSDPY 163


>gi|260461991|ref|ZP_05810236.1| protein of unknown function UPF0054 [Mesorhizobium opportunistum
           WSM2075]
 gi|259032238|gb|EEW33504.1| protein of unknown function UPF0054 [Mesorhizobium opportunistum
           WSM2075]
          Length = 166

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 95/162 (58%), Gaps = 7/162 (4%)

Query: 7   NLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           +LP +++ I++E   W  E  L  L +   A A +   + G        ELS+VF+D   
Sbjct: 11  SLP-VEIDISIEAGDWPAEASLARLVDRAVAVAFAETGAAGQ------SELSIVFSDDAH 63

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I TLN ++RG DKPTNVLSFP      DG    MLGDIVLA E +  EA +  K  ENH+
Sbjct: 64  IRTLNADWRGKDKPTNVLSFPAFPHVKDGPLPPMLGDIVLAAETVAREAALEDKPLENHI 123

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            HL+IHG LHL+GYDH  D +A  ME +ER+ L  L I DPY
Sbjct: 124 THLVIHGLLHLMGYDHETDTEAEAMEAVERAALARLAIPDPY 165


>gi|209883672|ref|YP_002287529.1| putative metalloprotease [Oligotropha carboxidovorans OM5]
 gi|209871868|gb|ACI91664.1| putative metalloprotease [Oligotropha carboxidovorans OM5]
          Length = 167

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 94/164 (57%), Gaps = 12/164 (7%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P  D+ IA +   W  E    ++ +   A A + +      +     EL+++ TD   I 
Sbjct: 5   PTADVLIAAD--CWKAEAEAESIVQNAIATAATFVT-----LPAEATELAVMLTDDASIR 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            LN E+RG DKPTNVLSFP A      + DG   LMLGDI +AYE    EA    K F +
Sbjct: 58  DLNREWRGQDKPTNVLSFPAAPLPGNTTQDGVP-LMLGDIAIAYETTRREAETDAKPFPH 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HL HL +HGFLHLLGYDH++D +A VME LER IL  LGI DPY
Sbjct: 117 HLSHLAVHGFLHLLGYDHIEDSEAEVMEELERRILAKLGIADPY 160


>gi|121601777|ref|YP_989494.1| hypothetical protein BARBAKC583_1245 [Bartonella bacilliformis
           KC583]
 gi|145572753|sp|A1UU41|RRMF_BARBK RecName: Full=Probable rRNA maturation factor
 gi|120613954|gb|ABM44555.1| conserved hypothetical protein TIGR00043 [Bartonella bacilliformis
           KC583]
          Length = 158

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 5/158 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + + +ENA WGDE  L T+ E      +  L      + +   ELSL+FT++ R+  +
Sbjct: 2   ISINMTIENAEWGDEKILYTITEKALIATIDRL-----SLTQVTSELSLLFTNNMRMAQI 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++R  +KPTNVLSFP     +      MLGDIVLA E I  EA   GK F +HL H+I
Sbjct: 57  NTQWRNKNKPTNVLSFPAFPLKAGQNPGPMLGDIVLARETIVYEAEEEGKSFHDHLTHMI 116

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH  D +A  ME LE+ IL+ + I +PY
Sbjct: 117 VHGILHLLGYDHETDDEAYQMEELEKEILQKIAIKNPY 154


>gi|218508193|ref|ZP_03506071.1| hypothetical protein RetlB5_11662 [Rhizobium etli Brasil 5]
          Length = 156

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/114 (55%), Positives = 81/114 (71%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+SLVFTD   I+ +N E+RG DK TNVLSFP            MLGDI++A E +E EA
Sbjct: 35  EVSLVFTDDASIQDINAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETVEREA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           + L K F++HL HL++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 95  HELEKSFDDHLTHLLVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 148


>gi|49473879|ref|YP_031921.1| hypothetical protein BQ02120 [Bartonella quintana str. Toulouse]
 gi|59799034|sp|Q6G0N3|RRMF_BARQU RecName: Full=Probable rRNA maturation factor
 gi|49239382|emb|CAF25715.1| hypothetical protein BQ02120 [Bartonella quintana str. Toulouse]
          Length = 158

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 97/159 (61%), Gaps = 7/159 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDSHRIET 69
           + + I VE+A W +E  L  + E      +++L        EN+V E+SL+FTD   +  
Sbjct: 2   ITIDITVESARWNNEKMLYDITEKALKTTMNHL------SLENVVSEISLLFTDDKHMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N ++R  +K TNVLSFP     +     LMLGDI++A E + +EA   GK F++HL H+
Sbjct: 56  INAQWRNKNKSTNVLSFPALPLKAGDPPGLMLGDIIIAQETVVLEAKKEGKSFQDHLTHM 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I+HG LHLLGY+H  + +AC ME LER IL  L INDPY
Sbjct: 116 IVHGILHLLGYNHETNDEACQMEELEREILLKLSINDPY 154


>gi|163867520|ref|YP_001608719.1| hypothetical protein Btr_0248 [Bartonella tribocorum CIP 105476]
 gi|189039700|sp|A9IMW1|RRMF_BART1 RecName: Full=Probable rRNA maturation factor
 gi|161017166|emb|CAK00724.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 163

 Score =  130 bits (326), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 7/157 (4%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDSHRIETLN 71
           + I V++A W DE  L  + E     A+       +   EN+V E+SL+FTD   +  +N
Sbjct: 4   IDIMVKDAGWNDEKMLYNITEKALTTAMH------HVSLENVVSEISLLFTDDEHMAKIN 57

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
            ++RG +K TNVLSFP     +      MLGDI++A E + +EA   GK F++HL H+I+
Sbjct: 58  AQWRGKNKSTNVLSFPAFPIKAGNPPGPMLGDIIIARETVVLEAEKQGKTFQDHLTHMIV 117

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HG LHLLGYDH  D +A  ME LER IL+ L I DPY
Sbjct: 118 HGILHLLGYDHETDDEAHQMEKLEREILQKLSIKDPY 154


>gi|304393796|ref|ZP_07375721.1| putative metalloprotease [Ahrensia sp. R2A130]
 gi|303293995|gb|EFL88370.1| putative metalloprotease [Ahrensia sp. R2A130]
          Length = 172

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 92/154 (59%), Gaps = 6/154 (3%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           + +E   WGDE  L TL E   A A  +++     + E+  E S +FT+   +  LN ++
Sbjct: 6   LTIEGGEWGDEAALATLIERTLATAAPHIVDG---LPED-AETSFLFTNDEAVRVLNRDW 61

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           RG DKPTNVLSF  A     G  + +LGDI +A E +  EA    K F+NHL H+I+HG 
Sbjct: 62  RGQDKPTNVLSF--AANEGGGPVTPLLGDIAIAQETVAREAEEQAKSFDNHLTHMIVHGL 119

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           LHL+G+DH +D +A  ME LER IL DL + DPY
Sbjct: 120 LHLIGHDHENDTEADEMEALERRILADLSMADPY 153


>gi|218658441|ref|ZP_03514371.1| hypothetical protein RetlI_01597 [Rhizobium etli IE4771]
          Length = 127

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 80/114 (70%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+SLVFTD   I+ +N E+RG DK TNVLSFP            MLGDI++A E +E EA
Sbjct: 6   EVSLVFTDDASIQDINAEWRGKDKATNVLSFPAFPVKPGKMPGPMLGDIIIARETVEREA 65

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           + L K  ++HL HL++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 66  HELEKSLDDHLTHLLVHGFLHLLGYDHMNSTEAEIMEGLETRILAQLGLSDPYE 119


>gi|319405108|emb|CBI78712.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 158

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 91/154 (59%), Gaps = 5/154 (3%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +E+A W DE  L  + +      + +L      + E   ELSL+FTD  R+  +N ++
Sbjct: 6   ITIESAKWNDEEMLYNITDKALVTTLQHL-----SLNEITSELSLLFTDDTRMAQINAQW 60

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R  +KPTNVLSFP     +     LMLGDIV+A E +  EA    K F++HL H+IIHG 
Sbjct: 61  RHHNKPTNVLSFPAFPLKAGQNPRLMLGDIVIAQETVMREAEEERKSFQDHLTHIIIHGI 120

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           LHLLGYDH  + +A  ME LE+ IL+ L I DPY
Sbjct: 121 LHLLGYDHETNNEANQMEKLEKEILQKLSIKDPY 154


>gi|91974722|ref|YP_567381.1| hypothetical protein RPD_0240 [Rhodopseudomonas palustris BisB5]
 gi|123735849|sp|Q13EK9|RRMF_RHOPS RecName: Full=Probable rRNA maturation factor
 gi|91681178|gb|ABE37480.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           BisB5]
          Length = 195

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 76/120 (63%), Gaps = 6/120 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-SDGC-----SSLMLGDIVLAY 108
            EL+++ TD   +  LN  YRGIDKPTNVLSFP       D C     +  MLGDI +AY
Sbjct: 69  AELAVMLTDDDGVRALNASYRGIDKPTNVLSFPAPQPDYQDACQDSGGAPQMLGDIAIAY 128

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           + +  EA+  GK F +HL HL +HGFLHL+GYDH  D +A  ME  ERSIL  LGI DPY
Sbjct: 129 QTVRREADDEGKPFAHHLSHLAVHGFLHLVGYDHETDAEAETMESTERSILAGLGIPDPY 188


>gi|90421994|ref|YP_530364.1| hypothetical protein RPC_0470 [Rhodopseudomonas palustris BisB18]
 gi|122477512|sp|Q21C41|RRMF_RHOPB RecName: Full=Probable rRNA maturation factor
 gi|90104008|gb|ABD86045.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           BisB18]
          Length = 168

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 77/115 (66%), Gaps = 2/115 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEI 113
           EL+++ TD   ++TLN  +RGIDKPTNVLSFP      D    +  MLGDI +AY+    
Sbjct: 47  ELAVMLTDDAGVQTLNANWRGIDKPTNVLSFPALQPEGDAPDDAPKMLGDIAIAYQTTRR 106

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           EA+  GK F++HL HL +HGFLHL+GYDH  D +A  ME LER IL  LG+ DPY
Sbjct: 107 EADDEGKPFDHHLSHLAVHGFLHLVGYDHEKDAEAEAMESLEREILAQLGVPDPY 161


>gi|85714183|ref|ZP_01045172.1| hypothetical protein NB311A_08503 [Nitrobacter sp. Nb-311A]
 gi|85699309|gb|EAQ37177.1| hypothetical protein NB311A_08503 [Nitrobacter sp. Nb-311A]
          Length = 190

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 66/117 (56%), Positives = 75/117 (64%), Gaps = 3/117 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEII 111
            EL+++ TD   I TLN  +RGIDKPTNVLSFP       S  G    MLGDI +AYE +
Sbjct: 67  AELAIMLTDDAGIHTLNANWRGIDKPTNVLSFPALQPTGPSLPGDPPRMLGDIAIAYETL 126

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             EA+   K F +HL HL IHGFLHL+GYDH  D DA  ME LER IL  LGI DPY
Sbjct: 127 RREADNEHKPFSHHLSHLAIHGFLHLIGYDHETDADAVEMENLERKILAQLGIPDPY 183


>gi|254503442|ref|ZP_05115593.1| conserved hypothetical protein TIGR00043, putative [Labrenzia
           alexandrii DFL-11]
 gi|222439513|gb|EEE46192.1| conserved hypothetical protein TIGR00043, putative [Labrenzia
           alexandrii DFL-11]
          Length = 173

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/156 (47%), Positives = 90/156 (57%), Gaps = 5/156 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + IAVE   W DE  L  L +   A A   L      V E   E+SL+FT+   I+ LN 
Sbjct: 13  IDIAVEAGDWPDETALIKLAQTAIAAA---LKGADLEVLEK-AEVSLLFTNDEGIQKLNH 68

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++R  DKPTNVLSFP      D     +LGDIV AYE +  EA  LG EF NHL HL +H
Sbjct: 69  QWRDKDKPTNVLSFP-GNDPQDDVYGPLLGDIVFAYETVAKEAEELGIEFNNHLTHLTVH 127

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LHL  YDH +  +A +ME LE +IL  LGI+DPY
Sbjct: 128 GLLHLFDYDHQEKDEAELMESLETAILAGLGIDDPY 163


>gi|319898346|ref|YP_004158439.1| hypothetical protein BARCL_0168 [Bartonella clarridgeiae 73]
 gi|319402310|emb|CBI75849.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 158

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 91/154 (59%), Gaps = 5/154 (3%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           + +E+A WGDE  L  + E      + +L      + E   ELSL+FTD   +  +N ++
Sbjct: 6   MTIESAKWGDEKMLYNITEKALTTTLQHL-----SLNEVRSELSLLFTDDKHMAQINAQW 60

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R  +K TNVLSFP+    +     LMLGDI++A E I  EA    K F++HL H+IIHG 
Sbjct: 61  RHQNKSTNVLSFPSFPLKAGQNPGLMLGDIIIAQETIMREAEEEKKSFQDHLTHIIIHGI 120

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           LHLLGY+H  + +A  ME LER IL+ L I DPY
Sbjct: 121 LHLLGYNHETNDEANQMEKLEREILQKLSIKDPY 154


>gi|159184274|ref|NP_353390.2| hypothetical protein Atu0358 [Agrobacterium tumefaciens str. C58]
 gi|26006905|sp|Q8UID9|RRMF_AGRT5 RecName: Full=Probable rRNA maturation factor
 gi|159139601|gb|AAK86175.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 168

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/160 (50%), Positives = 97/160 (60%), Gaps = 3/160 (1%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           LD+QI+VE   W  E +L      V   AV  L    +  F K   VELSLVFTD   I 
Sbjct: 4   LDIQISVEAEGWSSEENLAAFATKVLNAAVDFLKREEEQPFPK-MPVELSLVFTDDENIR 62

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+R  DK TNVLSFP       G    MLGDIV+A E +E EA  L K FE+HL H
Sbjct: 63  EINAEWRDKDKATNVLSFPAFPLEPGGMPGPMLGDIVIARETVEREALELDKSFEDHLTH 122

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L++HGFLHL GYDH+D+++A  ME LE  IL  LG++DPY
Sbjct: 123 LLVHGFLHLFGYDHMDEEEAEEMESLETRILAVLGLSDPY 162


>gi|163757741|ref|ZP_02164830.1| hypothetical protein HPDFL43_20062 [Hoeflea phototrophica DFL-43]
 gi|162285243|gb|EDQ35525.1| hypothetical protein HPDFL43_20062 [Hoeflea phototrophica DFL-43]
          Length = 171

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 1/161 (0%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRI 67
           P   L +A+E   WGDE  +  L +     A ++L  ++         E+SLV  D   +
Sbjct: 5   PLFSLALALEAGEWGDEARIEALAQTALEAAAADLTRNEAQPFPSEPPEVSLVLADDAMM 64

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             +N E+R   KPTNVLSFP    +       MLGDI+LA E IE EA  LGK  + H+ 
Sbjct: 65  TGINSEWRAQAKPTNVLSFPAFPLTPGAMPGPMLGDIILARETIEREAGDLGKPVDEHIT 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HL++HGFLHL GYDH+ ++DA  ME +E  IL  L ++DPY
Sbjct: 125 HLVVHGFLHLFGYDHIQNEDAEKMEAIETRILTSLNLSDPY 165


>gi|319403638|emb|CBI77223.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 158

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 91/158 (57%), Gaps = 5/158 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E+A W +E  L  + E      + +L      + E   ELSL+FTD   +  +
Sbjct: 2   ISIDITIESAKWNNEKMLYNITEKALVTTLQHL-----SLNEITSELSLLFTDDTHMAQI 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +KPTNVLSFP     +     LMLGDIV+A E +  EA    K F++HL H+I
Sbjct: 57  NARWRNHNKPTNVLSFPAFPLKAGQNPKLMLGDIVIAQETVMREAEEEKKSFQDHLTHII 116

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH  + +A  ME LE+ IL+ L I DPY
Sbjct: 117 IHGILHLLGYDHETNDEANQMEKLEKEILQKLTIKDPY 154


>gi|27375904|ref|NP_767433.1| hypothetical protein bll0793 [Bradyrhizobium japonicum USDA 110]
 gi|46577464|sp|Q89W99|RRMF_BRAJA RecName: Full=Probable rRNA maturation factor
 gi|27349042|dbj|BAC46058.1| bll0793 [Bradyrhizobium japonicum USDA 110]
          Length = 183

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 88/142 (61%), Gaps = 8/142 (5%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVE--LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            E V  +AV+   +    V E++ E  ++++ TD   I TLN  +RGIDKPTNVLSFP  
Sbjct: 38  SEAVIQRAVA---AAAESVDEDVAEAEVAVMLTDDAGIRTLNSNWRGIDKPTNVLSFPAL 94

Query: 90  FAS---SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                  +G +  MLGDI +AYE +  EA+   K F++HL HL +HGFLHL+GYDH +D 
Sbjct: 95  QPEGEWKEGDAPRMLGDIAIAYETMRREADEEKKPFDHHLSHLAVHGFLHLIGYDHENDD 154

Query: 147 DACVMEGLERSILEDLGINDPY 168
           DA  ME LE  IL  LGI DPY
Sbjct: 155 DAEEMEALETQILAHLGIPDPY 176


>gi|92115656|ref|YP_575385.1| hypothetical protein Nham_0023 [Nitrobacter hamburgensis X14]
 gi|122418988|sp|Q1QS72|RRMF_NITHX RecName: Full=Probable rRNA maturation factor
 gi|91798550|gb|ABE60925.1| protein of unknown function UPF0054 [Nitrobacter hamburgensis X14]
          Length = 190

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 3/117 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEII 111
            EL+++ TD   I TLN  +RGIDKPTNVLSFP      A S   +  MLGDI +AYE +
Sbjct: 67  AELAIMLTDDAGIRTLNANWRGIDKPTNVLSFPALQPTGAPSPDDAPRMLGDIAIAYETL 126

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             EA    K F++HL HL IHGFLHL+GYDH  D++A  ME LER IL  LGI DPY
Sbjct: 127 RREACDEHKPFDHHLSHLTIHGFLHLIGYDHETDEEAGEMENLERKILARLGIPDPY 183


>gi|319406554|emb|CBI80196.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 158

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 89/154 (57%), Gaps = 5/154 (3%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +E+A W +E  L  + E      + +L      + E   ELSL+FTD   +  +N  +
Sbjct: 6   ITIESAKWNNEKMLYNITEKALVTTLQHL-----SLNEITSELSLLFTDDTHMAQINARW 60

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R  +KPTNVLSFP     +     LMLGDIV+A E +  EA    K F++HL H+IIHG 
Sbjct: 61  RNHNKPTNVLSFPAFPLKAGQNPKLMLGDIVIAQETVMREAEEEKKSFQDHLTHIIIHGI 120

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           LHLLGYDH  + +A  ME LE+ IL+ L I DPY
Sbjct: 121 LHLLGYDHETNDEANQMEKLEKEILQKLTIKDPY 154


>gi|307942737|ref|ZP_07658082.1| putative metalloprotease [Roseibium sp. TrichSKD4]
 gi|307773533|gb|EFO32749.1| putative metalloprotease [Roseibium sp. TrichSKD4]
          Length = 171

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 6/159 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L + +++E   WG    L+ LCE    +AV+  ++ G FV  +  ELS+V TD   I+ L
Sbjct: 10  LTIDLSIEAGDWGPLEPLKKLCE----RAVAETLASGLFVVPH-SELSVVLTDDASIKVL 64

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  DKPTNVLSFP +    +    L LGDIV+A E +  EA+ +G EF  HL HL 
Sbjct: 65  NNNWRQKDKPTNVLSFPGSDPDDERYGPL-LGDIVVALETVTREADEMGIEFPAHLTHLF 123

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHL  YDH D ++A VME  ER I+  LG  DPYE
Sbjct: 124 VHGLLHLFDYDHQDLEEAEVMERKERQIMRCLGYEDPYE 162


>gi|75674215|ref|YP_316636.1| hypothetical protein Nwi_0016 [Nitrobacter winogradskyi Nb-255]
 gi|123614405|sp|Q3SWQ7|RRMF_NITWN RecName: Full=Probable rRNA maturation factor
 gi|74419085|gb|ABA03284.1| Protein of unknown function [Nitrobacter winogradskyi Nb-255]
          Length = 190

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 86/142 (60%), Gaps = 8/142 (5%)

Query: 32  CEVVFAKAVSNLISKGYFVKENI-VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
            E V  +A++   + G   K+    EL+++ TD   I TLN  +RG+DKPTNVLSFP A 
Sbjct: 45  AEAVIHRAIAT--AAGMVDKDTGDAELAIMLTDDAGIRTLNANWRGLDKPTNVLSFP-AL 101

Query: 91  ASSDGC----SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             +  C       MLGDI +AYE +  EA    K F++HL HL +HGFLHL+GYDH  D 
Sbjct: 102 QPTGPCLPDDPPRMLGDIAIAYETLRREAGDERKTFDHHLSHLAVHGFLHLIGYDHETDG 161

Query: 147 DACVMEGLERSILEDLGINDPY 168
           +A  ME LER IL  LGI DPY
Sbjct: 162 EAEEMESLERQILAQLGIPDPY 183


>gi|316931569|ref|YP_004106551.1| hypothetical protein Rpdx1_0174 [Rhodopseudomonas palustris DX-1]
 gi|315599283|gb|ADU41818.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           DX-1]
          Length = 167

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/116 (53%), Positives = 75/116 (64%), Gaps = 3/116 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA--SSDGCSSLMLGDIVLAYEIIE 112
            EL+++ TD   I  LN  +RG DKPTNVLSFP A      DG    MLGDI +AY+ + 
Sbjct: 46  AELAVMLTDDEHIRALNASFRGKDKPTNVLSFPAAQPEVQPDGAPR-MLGDIAIAYQTVR 104

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA+  GK F +HL HL +HGFLHL+GYDH  D+ A  ME  ER+IL  LGI DPY
Sbjct: 105 READDEGKPFGHHLSHLAVHGFLHLVGYDHETDQQADEMEDAERTILARLGIPDPY 160


>gi|115522233|ref|YP_779144.1| hypothetical protein RPE_0204 [Rhodopseudomonas palustris BisA53]
 gi|122298061|sp|Q07V70|RRMF_RHOP5 RecName: Full=Probable rRNA maturation factor
 gi|115516180|gb|ABJ04164.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           BisA53]
          Length = 172

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 77/116 (66%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCSSLMLGDIVLAYEIIE 112
            EL+++ +D   + TLN  +RG+DKPTNVLSFP     A+    +  MLGDI +AYE   
Sbjct: 45  AELAVMLSDDAGVRTLNANWRGLDKPTNVLSFPALQPSATMPDDAPRMLGDIAIAYETTR 104

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA+  GK F++HL HL +HGFLHL+GYDH  + +A  ME LER IL  LG+ DPY
Sbjct: 105 READDEGKPFDHHLSHLAVHGFLHLVGYDHETESEAEAMEQLERRILAQLGVPDPY 160


>gi|240849890|ref|YP_002971278.1| hypothetical protein Bgr_02340 [Bartonella grahamii as4aup]
 gi|240267013|gb|ACS50601.1| hypothetical protein Bgr_02340 [Bartonella grahamii as4aup]
          Length = 163

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 94/157 (59%), Gaps = 7/157 (4%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDSHRIETLN 71
           + I V++  W DE  L  + E    KA+  + +  +    N+V E+SL+FTD   +  +N
Sbjct: 4   IDIMVKSGGWNDEKMLYNITE----KAL--MTTMHHVSLANVVSEISLLFTDDKHMAQIN 57

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
            ++R  +K TNVLSFP     +      MLGDI++A E + +EA   GK F++HL H+I+
Sbjct: 58  AQWRNKNKSTNVLSFPAFPLKAGNPPGPMLGDIIIARETVVLEAEKQGKTFQDHLTHMIV 117

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HG LHLLGYDH  D +A  ME LER IL+ L I DPY
Sbjct: 118 HGILHLLGYDHETDNEAYQMEKLEREILQKLSIKDPY 154


>gi|325291792|ref|YP_004277656.1| hypothetical protein AGROH133_03547 [Agrobacterium sp. H13-3]
 gi|325059645|gb|ADY63336.1| hypothetical protein AGROH133_03547 [Agrobacterium sp. H13-3]
          Length = 168

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/159 (48%), Positives = 94/159 (59%), Gaps = 1/159 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE   W  E  L          AV  L   +     +  VELSLVFTD   I  
Sbjct: 4   LDIQISVEAEGWSSEEDLLAFATKALDAAVDFLKREENQPFPKMPVELSLVFTDDENIRE 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+R  DK TNVLSFP       G    MLGDIV+A E +E EA  L K FE+HL HL
Sbjct: 64  INAEWRDKDKATNVLSFPAFPLEPGGMPGPMLGDIVIARETVEREALELEKSFEDHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HGFLHL GYDH+D+++A  ME LE  IL  LG++DPY
Sbjct: 124 LVHGFLHLFGYDHMDEEEAEEMESLETRILAVLGLSDPY 162


>gi|217979026|ref|YP_002363173.1| protein of unknown function UPF0054 [Methylocella silvestris BL2]
 gi|254801577|sp|B8ETG9|RRMF_METSB RecName: Full=Probable rRNA maturation factor
 gi|217504402|gb|ACK51811.1| protein of unknown function UPF0054 [Methylocella silvestris BL2]
          Length = 176

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/157 (47%), Positives = 95/157 (60%), Gaps = 7/157 (4%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + IAVE   W       TL E V  + +S   S      E   E+S+VF D   I  LN 
Sbjct: 5   IDIAVEAEAWESFEDPATLAETVIVQTISQ--SGAKLAAE--AEISIVFCDDAFIADLNR 60

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++RG+DKPTNVLSFP+    +    + +LGDIV+AYE  E EA   GK F +H+ HLI H
Sbjct: 61  KWRGVDKPTNVLSFPSGGPIA---VTPVLGDIVIAYETTEREAQEAGKPFRDHVAHLIAH 117

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           GFLHL+GYDH+   DA  ME LERS+L  LGI+DPY+
Sbjct: 118 GFLHLIGYDHLAAADAEAMEALERSVLARLGIDDPYQ 154


>gi|49475036|ref|YP_033077.1| hypothetical protein BH02240 [Bartonella henselae str. Houston-1]
 gi|59799036|sp|Q6G4V8|RRMF_BARHE RecName: Full=Probable rRNA maturation factor
 gi|49237841|emb|CAF27036.1| hypothetical protein BH02240 [Bartonella henselae str. Houston-1]
          Length = 158

 Score =  120 bits (302), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 100/160 (62%), Gaps = 9/160 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDSHRIET 69
           + + I VE+  W DE  L  + E    KA+  ++   +   EN+V E+SL+FTD   +  
Sbjct: 2   ITIDILVESDGWNDEKMLYNITE----KALKTIMH--HLSLENVVSEISLLFTDDKHMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCS-SLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +N ++RG +K TNVLSFP AF    G S   MLGDI++A E + +EA    K F++HL H
Sbjct: 56  INAQWRGKNKSTNVLSFP-AFPLKVGDSPGPMLGDIIIARETVVLEAENEAKSFQDHLTH 114

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +I+HG LHLLGY+H  +++A  ME LER IL+ L I DPY
Sbjct: 115 MIVHGILHLLGYNHETNEEASHMEELERKILQKLSIKDPY 154


>gi|146337217|ref|YP_001202265.1| putative metal-dependent hydrolase [Bradyrhizobium sp. ORS278]
 gi|146190023|emb|CAL74015.1| conserved hypothetical protein; putative metal-dependent hydrolase
           [Bradyrhizobium sp. ORS278]
          Length = 180

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 3/117 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEII 111
            E++++ TD   I TLN  +RGIDKPTNVLSFP         D  +  MLGDI +AYE +
Sbjct: 57  AEIAVMLTDDGGIRTLNSNWRGIDKPTNVLSFPALQPTGPRGDEDAPRMLGDIAIAYETM 116

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             EA+   K F +HL HL +HGFLHL+GYDH  D +A  ME LE  IL  LGI DPY
Sbjct: 117 RREADEEQKPFAHHLSHLTVHGFLHLIGYDHETDDEAEEMEALETEILAHLGIPDPY 173


>gi|254295427|ref|YP_003061450.1| hypothetical protein Hbal_3085 [Hirschia baltica ATCC 49814]
 gi|254043958|gb|ACT60753.1| protein of unknown function UPF0054 [Hirschia baltica ATCC 49814]
          Length = 161

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 88/137 (64%), Gaps = 5/137 (3%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
           CE +   A+     K    +  +VE+  + T+   ++TLN ++RG DKPT+VLSFP   A
Sbjct: 26  CEAIIETALEAAAQK--TGESGLVEV--LLTNDAEMQTLNAQWRGKDKPTDVLSFPAEGA 81

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           S  G  +  LGD+ L  ++ + +++ LG++F  H++HL++HGFLHLLGYDH+ D +A  M
Sbjct: 82  SMPGMQTF-LGDLALGLDVAKADSDKLGRDFRLHVMHLLVHGFLHLLGYDHMSDDEANTM 140

Query: 152 EGLERSILEDLGINDPY 168
           EGLE  IL  LG+ DPY
Sbjct: 141 EGLEAQILAPLGLPDPY 157


>gi|163797132|ref|ZP_02191087.1| hypothetical protein BAL199_11501 [alpha proteobacterium BAL199]
 gi|159177648|gb|EDP62201.1| hypothetical protein BAL199_11501 [alpha proteobacterium BAL199]
          Length = 182

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 91/161 (56%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTL---CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +DL + V++  W      R L    E V  KAV   +     ++   VELS+V  D   +
Sbjct: 21  VDLMVRVDHTDW------RALLDDPETVVEKAVLAALDA---LEPEAVELSVVLADDAAV 71

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN ++RG D PTNVLSFP AF    G   L  GD++LA E ++ EA   GK   +HL 
Sbjct: 72  RALNRDHRGKDAPTNVLSFPPAFVPPAGPRPL--GDVILALETVQREAVEQGKATVDHLR 129

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HL++HG LHL GYDH  + DA  ME LER+IL  LG+ DPY
Sbjct: 130 HLVVHGVLHLSGYDHETESDAEEMEDLERTILAGLGVADPY 170


>gi|23015403|ref|ZP_00055180.1| COG0319: Predicted metal-dependent hydrolase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 164

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 95/163 (58%), Gaps = 11/163 (6%)

Query: 11  LDLQIAVENALWGDEI-HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +D+ + ++   W D +      C  + A A+  +      + E +VELS+V  D   ++ 
Sbjct: 5   IDIAVDIQYPAWTDVLPDAEARCGRLAATALGAV-----DLPEGVVELSIVLADDATVQG 59

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGC----SSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           LN ++RG D+PTNVLSF  +    D      + L+LGD++LAYE    EA   GK   +H
Sbjct: 60  LNRDWRGKDQPTNVLSF-ASLDDEDAPLVPGAPLLLGDVILAYETCAAEAKDQGKTLADH 118

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL++HG LHLLGYDH+DD++A  ME LE ++L  LGI DPY
Sbjct: 119 FGHLVVHGVLHLLGYDHMDDEEAAEMESLETTLLAALGIADPY 161


>gi|260431175|ref|ZP_05785146.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415003|gb|EEX08262.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 164

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 20/172 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L+I+VE++ W          E +  +AVS  ++    +  ++ E+S++  D  RI  L
Sbjct: 1   MNLEISVEDSRW-------QRLEELSRRAVSATLAY-LRMNPDLCEVSILGCDDSRIAEL 52

Query: 71  NFEYRGIDKPTNVLSFPT------------AFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+RG   PTNVLS+P                  D    ++LGDI ++Y+    EAN  
Sbjct: 53  NNEFRGKPAPTNVLSWPAEDLAPEEPGATPPLPEPDFTGEIVLGDIAISYDTCLREANEA 112

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GK  ++H+VHLI+HG LHLLGYDHV D DA +MEG E  IL  LGI++PY V
Sbjct: 113 GKSMDDHVVHLIVHGVLHLLGYDHVRDPDATLMEGCEIEILGKLGIDNPYNV 164


>gi|170747071|ref|YP_001753331.1| hypothetical protein Mrad2831_0637 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170653593|gb|ACB22648.1| protein of unknown function UPF0054 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 159

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 4/158 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ +AVE+A W  E  +  L E +  +AV   ++      +  VE+S++ TD   +  LN
Sbjct: 4   EIDLAVEDARW--ETAVADL-EALVTRAVEAGLAVAPEKPDGPVEVSVLLTDDAAVRELN 60

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +RG DKPTNVLSFP A       +++ LGD+VLAYE +  E+    K  +NHL HL++
Sbjct: 61  RTWRGKDKPTNVLSFPAAPQPRHAGTAVPLGDVVLAYETLVRESAEQSKPLQNHLAHLLV 120

Query: 132 HGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           HG LH LG DH + + +A  ME LE + L  LGI DPY
Sbjct: 121 HGTLHCLGQDHEIGETEADAMEALEVAALATLGIPDPY 158


>gi|209966241|ref|YP_002299156.1| hypothetical protein RC1_2976 [Rhodospirillum centenum SW]
 gi|209959707|gb|ACJ00344.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 226

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 93/187 (49%), Gaps = 37/187 (19%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +AVE+  W  E  L    E +   A    +++G  V +   ELS+V  D   + TLN +Y
Sbjct: 19  VAVESGGW--ETDLPD-AETLVLTAAEAALARGEGVPDGPAELSVVLADDATVRTLNRDY 75

Query: 75  RGIDKPTNVLSFPTAFASSDGCSS---------------------------------LML 101
           RG D+PTNVLSF   +A  D   +                                 ++L
Sbjct: 76  RGKDRPTNVLSF-ALYADGDDADTPPEGLEVEQDGPEGDIPGDDDAEDSLAQGDAPPVLL 134

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GD++LAYE +  EA    K   +HL HL++HG LHLLGYDH+ D DA  ME LE  IL  
Sbjct: 135 GDVILAYETVVREAGEQNKPLADHLTHLVVHGVLHLLGYDHITDPDAERMERLETEILAG 194

Query: 162 LGINDPY 168
           LGI+DPY
Sbjct: 195 LGISDPY 201


>gi|154245756|ref|YP_001416714.1| hypothetical protein Xaut_1812 [Xanthobacter autotrophicus Py2]
 gi|154159841|gb|ABS67057.1| protein of unknown function UPF0054 [Xanthobacter autotrophicus
           Py2]
          Length = 176

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/113 (52%), Positives = 73/113 (64%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++  TD  RI  LN E+RG DK TNVLSFP      D  +   LGDI++A E +  EA
Sbjct: 59  EVAITLTDDARIRVLNREWRGKDKATNVLSFPQPDLPDDVDAPQPLGDIIVALETLTGEA 118

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +HL HL++HG LHLLGYDH+DD +A  ME LER IL  LGI+DPY
Sbjct: 119 RAEDKTAGHHLAHLVVHGTLHLLGYDHIDDTEAEEMEALERRILAGLGIDDPY 171


>gi|56708799|ref|YP_164840.1| hypothetical protein SPOA0008 [Ruegeria pomeroyi DSS-3]
 gi|59799077|sp|Q5LLL4|RRMF_SILPO RecName: Full=Probable rRNA maturation factor
 gi|56680484|gb|AAV97149.1| conserved hypothetical protein TIGR00043 [Ruegeria pomeroyi DSS-3]
          Length = 165

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 99/173 (57%), Gaps = 20/173 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L + +E+  W       T+   +  +A+S  +++     E + E+SL+  D  RI  L
Sbjct: 1   MTLDLTLEDPRW-------TILPPLADRAISATLAQMGLDPE-LCEISLLGCDDARITAL 52

Query: 71  NFEYRGIDKPTNVLSFP-----------TAFAS-SDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R    PTNVLS+P           T  A   D   ++ LGDI +A++  + EA+  
Sbjct: 53  NAEFREKPSPTNVLSWPAEDLAAETPGGTPLAPEPDFTGAVPLGDIAIAFDTCQREADAA 112

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +H+ HLI+HG LHLLGYDH+ D+DA +MEGLE  IL +LGI+DPY ++
Sbjct: 113 GKPIADHVTHLIVHGLLHLLGYDHIRDEDATLMEGLETRILGNLGIDDPYTME 165


>gi|254448604|ref|ZP_05062063.1| hypothetical protein GP5015_1989 [gamma proteobacterium HTCC5015]
 gi|198261793|gb|EDY86079.1| hypothetical protein GP5015_1989 [gamma proteobacterium HTCC5015]
          Length = 155

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 87/160 (54%), Gaps = 10/160 (6%)

Query: 10  RLDLQIAVENALW-GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           +LD+  +V+ A W   E  +R       A A++   S G  V    +EL L        +
Sbjct: 4   QLDIDPSVQGARWLPSEADVREWTSATLA-AITRSFSAGVEVSFKWLELELS-------Q 55

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +LN +YRG D PTNVLSFP      DG   L LGDI +   ++E EA   GK    H  H
Sbjct: 56  SLNCDYRGKDSPTNVLSFPMQMPPIDGELEL-LGDIAICPAVVEREAGEQGKPLRAHWAH 114

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHL GYDH++D +A  ME LER IL  LGI DPY
Sbjct: 115 MVVHGMLHLCGYDHIEDTEALEMEALERDILASLGIEDPY 154


>gi|13474616|ref|NP_106185.1| hypothetical protein mlr5536 [Mesorhizobium loti MAFF303099]
 gi|26006933|sp|Q98BK1|RRMF_RHILO RecName: Full=Probable rRNA maturation factor
 gi|14025370|dbj|BAB51971.1| mlr5536 [Mesorhizobium loti MAFF303099]
          Length = 166

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/160 (46%), Positives = 92/160 (57%), Gaps = 6/160 (3%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P +D+ I+VE   W DE  L  L +     A +     G        ELS+VF+D   I 
Sbjct: 12  PPVDIDISVEAGDWPDEAGLARLVDRAVDAAFAETGVTGR------SELSVVFSDDAHIR 65

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN E+RG DKPTNVLSFP    +  G    MLGDIVLA E +  EA +  K  +NH+ H
Sbjct: 66  TLNAEWRGKDKPTNVLSFPAFPFAQGGPLPPMLGDIVLAAETVSREAALEDKPVQNHITH 125

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L+IHG LHLLG+DH  D +A  ME +ER+ L  L I DPY
Sbjct: 126 LVIHGLLHLLGHDHETDAEAEAMEAIERAALARLAIPDPY 165


>gi|319779780|ref|YP_004139256.1| hypothetical protein Mesci_0031 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165668|gb|ADV09206.1| protein of unknown function UPF0054 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 166

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 97/165 (58%), Gaps = 13/165 (7%)

Query: 7   NLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIV---ELSLVFTD 63
           N+P +D+ IAVE   W DE  L  L +    +AV     K  F +  +    ELSLVF+D
Sbjct: 11  NIP-VDIDIAVEAGNWPDEASLTRLVD----RAV-----KAAFAETGVAGRSELSLVFSD 60

Query: 64  SHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
              I+ LN  +RG DKPTNVLSFP    +  G    MLGDIVLA E +  EA +  K  E
Sbjct: 61  DAHIQVLNAGWRGKDKPTNVLSFPAFPFAQGGPLPPMLGDIVLAAETVAHEAVLEDKPVE 120

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           NH+ HL+IHG LHLLGYDH  + +A  ME +ER+ L  L I DPY
Sbjct: 121 NHITHLVIHGLLHLLGYDHETEAEAEAMEAVERAALARLAIPDPY 165


>gi|118590491|ref|ZP_01547893.1| hypothetical protein SIAM614_02911 [Stappia aggregata IAM 12614]
 gi|118436954|gb|EAV43593.1| hypothetical protein SIAM614_02911 [Stappia aggregata IAM 12614]
          Length = 189

 Score =  116 bits (291), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+SL+FTD   I  LN ++R  DK TNVLSFP +    D    L LGDIV AYE +  E
Sbjct: 67  TEVSLLFTDDASIRQLNAKWRDKDKATNVLSFPGSDPQGDVYGPL-LGDIVFAYETVAAE 125

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A  LG EF +HL HL +HG LHL  YDH + ++A +ME LE++IL  LGI+DPY
Sbjct: 126 AADLGIEFSDHLTHLTVHGLLHLFDYDHQESEEAELMESLEKAILASLGIDDPY 179


>gi|323138530|ref|ZP_08073598.1| protein of unknown function UPF0054 [Methylocystis sp. ATCC 49242]
 gi|322396164|gb|EFX98697.1| protein of unknown function UPF0054 [Methylocystis sp. ATCC 49242]
          Length = 172

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 3/113 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+ F D   I  LN E+RG DKPTNVLSFPT    ++     +LGDIV+AYE +  EA
Sbjct: 44  ELSVNFCDDAEIRELNAEWRGKDKPTNVLSFPTPGTLAN---RPLLGDIVIAYETVAREA 100

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  H++IHGFLHL+GYDH    +A  ME LER I   LG+ DPY
Sbjct: 101 GEQAKTLRDHTAHMVIHGFLHLIGYDHETSAEAETMEALERRIAAGLGLRDPY 153


>gi|154254050|ref|YP_001414874.1| hypothetical protein Plav_3619 [Parvibaculum lavamentivorans DS-1]
 gi|171769693|sp|A7HZ84|RRMF_PARL1 RecName: Full=Probable rRNA maturation factor
 gi|154158000|gb|ABS65217.1| protein of unknown function UPF0054 [Parvibaculum lavamentivorans
           DS-1]
          Length = 185

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 76/124 (61%), Gaps = 7/124 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-------SSLMLGDIVLA 107
            EL +V  D   +  LN  YRG + PTNVLSFP A     G        ++ +LGD+VLA
Sbjct: 58  AELCIVLGDDALVAKLNKAYRGKEGPTNVLSFPAAEMPDTGAPEAVFGGATPLLGDVVLA 117

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
            E I  EA    K+F +HL HL +HG LHLLG+DH++D DA  ME LER ILEDLGI DP
Sbjct: 118 RETIAREALDQNKKFADHLSHLTVHGVLHLLGHDHMEDVDADEMEALERDILEDLGIADP 177

Query: 168 YEVD 171
           Y  D
Sbjct: 178 YGAD 181


>gi|56550970|ref|YP_161809.1| hypothetical protein ZMO0074 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761440|ref|ZP_04759528.1| protein of unknown function UPF0054 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753355|ref|YP_003226248.1| hypothetical protein Za10_1119 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|59799005|sp|Q5NRF6|RRMF_ZYMMO RecName: Full=Probable rRNA maturation factor
 gi|56542544|gb|AAV88698.1| protein of unknown function UPF0054 [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374347|gb|EER63844.1| protein of unknown function UPF0054 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552718|gb|ACV75664.1| protein of unknown function UPF0054 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 176

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 88/154 (57%), Gaps = 6/154 (3%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
           LW ++ +   L +    +AVS   S     K+   E+S+ F+D+  +  LN  +R  D+P
Sbjct: 11  LWPEQSNWEALAQTACQQAVSVSASDFLLAKDYETEISVCFSDNDTVHALNKTWRDKDRP 70

Query: 81  TNVLSFPTAFA------SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           TNVLSFP   A       +   S  +LGDI+LA+++ + EA   G   ENH+ HLI HG 
Sbjct: 71  TNVLSFPMMEAEELAEIKNRVGSECLLGDIILAFDVAKKEALEKGISLENHVTHLITHGT 130

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           LHLLGYDH+ D +A +ME LER  L  L I DPY
Sbjct: 131 LHLLGYDHILDNEAEIMEDLERKALAQLDIPDPY 164


>gi|328545926|ref|YP_004306035.1| metalloprotease [polymorphum gilvum SL003B-26A1]
 gi|326415666|gb|ADZ72729.1| Putative metalloprotease [Polymorphum gilvum SL003B-26A1]
          Length = 178

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/162 (46%), Positives = 87/162 (53%), Gaps = 7/162 (4%)

Query: 12  DLQI--AVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           DLQI  AVE   W D   L  L     A A  N   +     E    LSLVF D   I  
Sbjct: 15  DLQIDLAVEAGDWPDGARLEDLTRAAVAAAFRNAPLRTLPGSE----LSLVFLDDDGIRA 70

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  DKPTNVLSF    A   G    MLGDIVL+ + +  EA   G  F +H  HL
Sbjct: 71  LNRSWRNKDKPTNVLSFSGGDAVG-GRYGPMLGDIVLSSDTLAREAKEQGISFCDHFSHL 129

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHL GYDH  + +A +MEGLER IL DLGI DPY  D
Sbjct: 130 VVHGLLHLFGYDHQIEAEAEIMEGLERRILADLGIADPYAGD 171


>gi|254475005|ref|ZP_05088391.1| diacyglycerol kinase [Ruegeria sp. R11]
 gi|214029248|gb|EEB70083.1| diacyglycerol kinase [Ruegeria sp. R11]
          Length = 189

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 95/173 (54%), Gaps = 18/173 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L I++E   W     L T  E +  +A   ++S  + +     E+S++  D  RI  L
Sbjct: 14  MGLDISIEEDRW-----LETDLEPLVIEATEAVLSH-FRLDPEACEISVLACDDARIAVL 67

Query: 71  NFEYRGIDKPTNVLSFP-----------TAFAS-SDGCSSLMLGDIVLAYEIIEIEANVL 118
           N ++R   KPTNVLS+P           T  A  +D    + LGDI +AYE    EA   
Sbjct: 68  NEDFRQKAKPTNVLSWPAEELAAEEPGGTPMAPEADFTGEIPLGDIAIAYETCAREAQEA 127

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +HL HLI+HG LHLLGYDH+ D DA +MEGLE  IL  +GI+DPY V+
Sbjct: 128 GKPLADHLRHLIVHGLLHLLGYDHIRDPDATLMEGLEVEILGKMGIDDPYTVE 180


>gi|319408020|emb|CBI81674.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 158

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 95/159 (59%), Gaps = 11/159 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIV--ELSLVFTDSHRIETL 70
           + I +E++ W +E       +V++      L +  + +  N V  ELSL+FT+   I  +
Sbjct: 4   IDITIEDSEWDNE-------DVLYDITTKALTTTMHHLSLNQVTSELSLLFTNDDHIAQI 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS-SLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           N ++R  +KPTNVLSFP AF    G +   MLGDI++A E I  EA   GK F++HL H+
Sbjct: 57  NAQWRSQNKPTNVLSFP-AFPLKVGQNPKPMLGDIIIARETIMREAKEEGKSFQDHLTHM 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I+HG LHLLGY+H  + +A  ME LER IL  L I +PY
Sbjct: 116 IVHGLLHLLGYNHETNDEANQMEMLEREILSKLSIKNPY 154


>gi|308050554|ref|YP_003914120.1| hypothetical protein Fbal_2844 [Ferrimonas balearica DSM 9799]
 gi|307632744|gb|ADN77046.1| protein of unknown function UPF0054 [Ferrimonas balearica DSM 9799]
          Length = 148

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 91/159 (57%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+AVE     D +  +   E   A A+++             EL++  TD    + L
Sbjct: 3   LDLQLAVE----ADNLPSQAQLESWAALALADRPD---------AELTIRITDEAESQQL 49

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+   ++  EA    K   +H  H++
Sbjct: 50  NRDYRGKDKPTNVLSFP--FEAPPGIELPLLGDLVICAAVVAREAVEQEKAPMDHWAHMV 107

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           IHG LHL+GYDH+DD+DA  ME LER +L  LGI DPY+
Sbjct: 108 IHGCLHLIGYDHIDDEDAEEMESLERQLLAQLGIADPYQ 146


>gi|239996132|ref|ZP_04716656.1| hypothetical protein AmacA2_16882 [Alteromonas macleodii ATCC
           27126]
          Length = 158

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 89/155 (57%), Gaps = 4/155 (2%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I V+ A  GDE  L  +      +  +N + K   + E   E+++ FTD    ++LN EY
Sbjct: 5   IDVQQAFEGDEAILSAIPSPSELELWANAVLKYEGLAEQ--EVTIRFTDEAESQSLNHEY 62

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           RG DKPTNVLSFP  F +  G    +LGD+V+   +I  EA    K+  NH  H+ +HG 
Sbjct: 63  RGKDKPTNVLSFP--FEAPPGIEINLLGDLVICAPVISREAEEQHKDVSNHYAHMTVHGL 120

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           LHL+GYDH+DD +A  ME  E  IL  LGI +PYE
Sbjct: 121 LHLMGYDHIDDAEAEEMESKEIDILAHLGIANPYE 155


>gi|258621977|ref|ZP_05717006.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258627066|ref|ZP_05721862.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258580584|gb|EEW05537.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258585730|gb|EEW10450.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 154

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+AVEN     E  L T  E  FA+ ++  I+   F  +   E+++   D      L
Sbjct: 5   LDLQLAVEN-----ENGLPT--EADFAQWLTRTITP--FQPQ--AEVTIRIVDEKESHAL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H++
Sbjct: 54  NLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 112 VHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|262172030|ref|ZP_06039708.1| predicted metal-dependent hydrolase [Vibrio mimicus MB-451]
 gi|261893106|gb|EEY39092.1| predicted metal-dependent hydrolase [Vibrio mimicus MB-451]
          Length = 154

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+AVE     DE  L T  E  FA+ ++  I+   F  +   E+++   D      L
Sbjct: 5   LDLQLAVE-----DENGLPT--EADFAQWLTRTITP--FQPQ--AEVTIRIVDEEESHAL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H++
Sbjct: 54  NLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 112 VHGSLHLLGYDHIEDDEAEEMESLETKIMQEMGFTDPY 149


>gi|198244509|ref|YP_002214657.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205351953|ref|YP_002225754.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207856133|ref|YP_002242784.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|226704003|sp|B5FNB0|RRMF_SALDC RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704004|sp|B5QWB9|RRMF_SALEP RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704005|sp|B5R815|RRMF_SALG2 RecName: Full=Probable rRNA maturation factor YbeY
 gi|197939025|gb|ACH76358.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205271734|emb|CAR36568.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206707936|emb|CAR32225.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326622412|gb|EGE28757.1| Putative metalloprotease ybeY [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326626992|gb|EGE33335.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 157

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 91/159 (57%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV-FTDSHRIET 69
           LDLQ+A EN       H     E  F + +  +I +  F +E  V + LV  T+SH    
Sbjct: 6   LDLQLACEN-------HAGLPDEAQFQRWLDGVIPQ--FQEEAEVTIRLVDETESH---D 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 112 VVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPY 150


>gi|303250397|ref|ZP_07336595.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252249|ref|ZP_07534146.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|302650723|gb|EFL80881.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860171|gb|EFM92187.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 163

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE-NIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++     ++    E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|262402696|ref|ZP_06079257.1| predicted metal-dependent hydrolase [Vibrio sp. RC586]
 gi|262351478|gb|EEZ00611.1| predicted metal-dependent hydrolase [Vibrio sp. RC586]
          Length = 154

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+AVEN     E  L T  E  FA+ ++  I+   F  +   E+++   D      L
Sbjct: 5   LDLQLAVEN-----ENGLPT--EADFAQWLTRTITP--FQPQ--AEVTIRIVDEKESHML 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H++
Sbjct: 54  NLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 112 VHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|52425735|ref|YP_088872.1| putative metalloprotease [Mannheimia succiniciproducens MBEL55E]
 gi|59799096|sp|Q65RX3|RRMF_MANSM RecName: Full=Probable rRNA maturation factor
 gi|52307787|gb|AAU38287.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 156

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E     D+ +L TL +  F    +N +   +F  E    +++   D      L
Sbjct: 7   IDLQIASE-----DQSNLPTLEQ--FTLWATNAVRAEHFEPE----ITIRIVDEAESHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           NF YRG D+PTNVLSFP  F   +     +LGD+V+  +++E EA   GK    H  H++
Sbjct: 56  NFTYRGKDRPTNVLSFP--FECPEEVELPLLGDLVICRQVVEREAQEQGKPLTAHWAHMV 113

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  D
Sbjct: 114 VHGSLHLLGYDHIEDDEAVEMESLETEIMTGLGFEDPYSYD 154


>gi|152969255|ref|YP_001334364.1| putative metalloprotease [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206580847|ref|YP_002239693.1| conserved hypothetical protein TIGR00043 [Klebsiella pneumoniae
           342]
 gi|238893719|ref|YP_002918453.1| putative metalloprotease [Klebsiella pneumoniae NTUH-K2044]
 gi|262041256|ref|ZP_06014467.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288936535|ref|YP_003440594.1| hypothetical protein Kvar_3682 [Klebsiella variicola At-22]
 gi|290510409|ref|ZP_06549779.1| metalloprotease [Klebsiella sp. 1_1_55]
 gi|330005962|ref|ZP_08305446.1| translation metalloprotein YbeY [Klebsiella sp. MS 92-3]
 gi|167016753|sp|A6T6B3|RRMF_KLEP7 RecName: Full=Probable rRNA maturation factor
 gi|226701661|sp|B5XZQ2|RRMF_KLEP3 RecName: Full=Probable rRNA maturation factor
 gi|150954104|gb|ABR76134.1| hypothetical protein KPN_00684 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206569905|gb|ACI11681.1| conserved hypothetical protein TIGR00043 [Klebsiella pneumoniae
           342]
 gi|238546035|dbj|BAH62386.1| hypothetical protein KP1_1641 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041372|gb|EEW42432.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288891244|gb|ADC59562.1| protein of unknown function UPF0054 [Klebsiella variicola At-22]
 gi|289777125|gb|EFD85123.1| metalloprotease [Klebsiella sp. 1_1_55]
 gi|328536034|gb|EGF62440.1| translation metalloprotein YbeY [Klebsiella sp. MS 92-3]
          Length = 157

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 91/158 (57%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E      +       E +F + V  +I    F +E+  EL++   D      L
Sbjct: 6   LDLQLACEETSGLPD-------EALFQRWVDAVIPP--FQEES--ELTIRLVDVAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA+  GK  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEASEQGKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  MEGLE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMEGLETEIMLALGYEDPY 150


>gi|262165202|ref|ZP_06032939.1| predicted metal-dependent hydrolase [Vibrio mimicus VM223]
 gi|262024918|gb|EEY43586.1| predicted metal-dependent hydrolase [Vibrio mimicus VM223]
          Length = 154

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 93/159 (58%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     DE  L T  E  FA+ ++  I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVE-----DENGLPT--EADFAQWLTRTITP--FQPQ--AEVTIRIVDEEESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEHEAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|16759620|ref|NP_455237.1| metalloprotease [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|29142607|ref|NP_805949.1| metalloprotease [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|62179266|ref|YP_215683.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161615113|ref|YP_001589078.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168231684|ref|ZP_02656742.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168236656|ref|ZP_02661714.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168240518|ref|ZP_02665450.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168264398|ref|ZP_02686371.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168820206|ref|ZP_02832206.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443004|ref|YP_002039912.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448551|ref|YP_002044703.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194470785|ref|ZP_03076769.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194734762|ref|YP_002113779.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251252|ref|YP_002145645.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197262278|ref|ZP_03162352.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|200390340|ref|ZP_03216951.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204930535|ref|ZP_03221465.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213425076|ref|ZP_03357826.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213608001|ref|ZP_03368827.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647867|ref|ZP_03377920.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|224582503|ref|YP_002636301.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238911618|ref|ZP_04655455.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289825601|ref|ZP_06544787.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|26006915|sp|Q8Z8G6|RRMF_SALTI RecName: Full=Probable rRNA maturation factor YbeY
 gi|75484424|sp|Q57RQ9|RRMF_SALCH RecName: Full=Probable rRNA maturation factor YbeY
 gi|189041075|sp|A9MUI2|RRMF_SALPB RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704002|sp|B5EZB0|RRMF_SALA4 RecName: Full=Probable rRNA maturation factor YbeY
 gi|238690245|sp|B4TB72|RRMF_SALHS RecName: Full=Probable rRNA maturation factor YbeY
 gi|238693560|sp|B4SYM8|RRMF_SALNS RecName: Full=Probable rRNA maturation factor YbeY
 gi|238693645|sp|B4TPY8|RRMF_SALSV RecName: Full=Probable rRNA maturation factor YbeY
 gi|254807367|sp|C0PW97|RRMF_SALPC RecName: Full=Probable rRNA maturation factor YbeY
 gi|25331411|pir||AI0583 conserved hypothetical protein STY0714 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16501912|emb|CAD05139.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138238|gb|AAO69809.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62126899|gb|AAX64602.1| putative metal-dependent hydrolase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364477|gb|ABX68245.1| hypothetical protein SPAB_02880 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401667|gb|ACF61889.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406855|gb|ACF67074.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457149|gb|EDX45988.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194710264|gb|ACF89485.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197214955|gb|ACH52352.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197240533|gb|EDY23153.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197290423|gb|EDY29779.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|199602785|gb|EDZ01331.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204320469|gb|EDZ05672.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205334140|gb|EDZ20904.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205340341|gb|EDZ27105.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205343173|gb|EDZ29937.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347119|gb|EDZ33750.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|224467030|gb|ACN44860.1| hypothetical protein SPC_0685 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|320084941|emb|CBY94730.1| putative metalloprotease ybeY [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322613206|gb|EFY10149.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621274|gb|EFY18131.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623694|gb|EFY20532.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628966|gb|EFY25745.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631688|gb|EFY28442.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637576|gb|EFY34278.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641916|gb|EFY38546.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646760|gb|EFY43266.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651461|gb|EFY47841.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653088|gb|EFY49422.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658809|gb|EFY55064.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664922|gb|EFY61115.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668924|gb|EFY65076.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670570|gb|EFY66703.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675311|gb|EFY71387.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682218|gb|EFY78243.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684953|gb|EFY80950.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322713732|gb|EFZ05303.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323193989|gb|EFZ79191.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323197919|gb|EFZ83041.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202034|gb|EFZ87094.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207167|gb|EFZ92120.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210926|gb|EFZ95789.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214306|gb|EFZ99057.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219289|gb|EGA03780.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225500|gb|EGA09730.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231059|gb|EGA15175.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323234109|gb|EGA18198.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238196|gb|EGA22254.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242570|gb|EGA26594.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323248453|gb|EGA32387.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251332|gb|EGA35204.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323262139|gb|EGA45701.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264849|gb|EGA48350.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323272314|gb|EGA55721.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 157

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN       H     E  F + +  +I +  F +E  V + LV  D      L
Sbjct: 6   LDLQLACEN-------HAGLPDEAQFQRWLDGVIPQ--FQEEAEVTIRLV--DEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 113 VHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPY 150


>gi|84687997|ref|ZP_01015860.1| hypothetical protein 1099457000237_RB2654_18208 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84663978|gb|EAQ10479.1| hypothetical protein RB2654_18208 [Rhodobacterales bacterium
           HTCC2654]
          Length = 162

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 14/150 (9%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L  L E   A  ++ L   G        E++L+  D  RI  LN E+R    PTNVLS
Sbjct: 15  LGLEALAETACAATLAKLGIAG-------AEIALLACDDDRIAALNTEFRDKPTPTNVLS 67

Query: 86  FPTAFASSDGCSS-------LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           +P+    +D           + LGDI +AY+    EA   GK   +H+ HL++HG LHLL
Sbjct: 68  WPSEERGADQPGGDPYPPEDMELGDIAIAYDTCAREAAEAGKPMVDHVTHLVVHGTLHLL 127

Query: 139 GYDHVDDKDACVMEGLERSILEDLGINDPY 168
           GYDH+DDKDA +MEGLE  IL  +G+ DPY
Sbjct: 128 GYDHIDDKDAALMEGLETEILGKMGLADPY 157


>gi|32033745|ref|ZP_00134040.1| COG0319: Predicted metal-dependent hydrolase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208174|ref|YP_001053399.1| putative metalloprotease [Actinobacillus pleuropneumoniae L20]
 gi|165976112|ref|YP_001651705.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190150005|ref|YP_001968530.1| hypothetical protein APP7_0736 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263336|ref|ZP_07544954.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
 gi|171855089|sp|A3N058|RRMF_ACTP2 RecName: Full=Probable rRNA maturation factor
 gi|238692332|sp|B3GXC9|RRMF_ACTP7 RecName: Full=Probable rRNA maturation factor
 gi|126096966|gb|ABN73794.1| hypothetical protein APL_0694 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|165876213|gb|ABY69261.1| hypothetical protein APJL_0692 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189915136|gb|ACE61388.1| hypothetical protein APP7_0736 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306871398|gb|EFN03124.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
          Length = 163

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE-NIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++     ++    E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESYELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|304395672|ref|ZP_07377555.1| protein of unknown function UPF0054 [Pantoea sp. aB]
 gi|304356966|gb|EFM21330.1| protein of unknown function UPF0054 [Pantoea sp. aB]
          Length = 157

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN             E +F + +S  ++   F  E+ V + LV  D      L
Sbjct: 6   LDLQVACENTA-------NLPDESLFHRWLSAAVTP--FQPESEVTVRLV--DEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQGKSVEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  MEGLE  I+  LG  DPY
Sbjct: 113 VHGTLHLLGYDHIEDDEADEMEGLETEIMLALGYPDPY 150


>gi|167550793|ref|ZP_02344549.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168465846|ref|ZP_02699728.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195631609|gb|EDX50129.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|205324293|gb|EDZ12132.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 157

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN       H     E  F + +  +I +  F +E   E+++   D      L
Sbjct: 6   LDLQLACEN-------HAGLPDEAQFQRWLDGVIPQ--FQEE--AEVTIRLVDEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 113 VHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPY 150


>gi|258544939|ref|ZP_05705173.1| metalloprotease [Cardiobacterium hominis ATCC 15826]
 gi|258519859|gb|EEV88718.1| metalloprotease [Cardiobacterium hominis ATCC 15826]
          Length = 161

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 2/125 (1%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD 103
            ++     E  +EL++   D+  ++ LN EYRG D PTNVLSFP  +   +     +LGD
Sbjct: 30  TARATLAIEEALELTIRLVDNDEMQELNREYRGKDYPTNVLSFPCDWDLPE--EPRLLGD 87

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +V+A  ++  EA    K  E H  H++IHGFLHLLGYDH++D DA  ME  ER+IL  LG
Sbjct: 88  VVIAAAVVNREAKEQKKTMEAHWAHIVIHGFLHLLGYDHIEDADAEKMENTERNILAQLG 147

Query: 164 INDPY 168
             DPY
Sbjct: 148 YADPY 152


>gi|297581339|ref|ZP_06943263.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534655|gb|EFH73492.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 154

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E  FA  +S  I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAE--FALWLSRTITP--FQPQ--AEVTIRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++D+G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQDMGFTDPY 149


>gi|254285630|ref|ZP_04960594.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150424492|gb|EDN16429.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 154

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+AVEN     E  L +  E  FA  ++  I+      +   E+++   D      L
Sbjct: 5   LDLQLAVEN-----EHGLPSEAE--FALWLTRTITPF----QTQAEVTIRIVDEAESHAL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G +  +LGD+V+  +++E EA    K  + H  H++
Sbjct: 54  NLNYRGKDKPTNVLSFP--FEAPPGMAMDLLGDLVICRQVVEREAIEQNKPLQAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++D+G  DPY
Sbjct: 112 VHGSLHLLGYDHIEDDEAEEMESLETEIMQDMGFTDPY 149


>gi|56414203|ref|YP_151278.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197363127|ref|YP_002142764.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|62901210|sp|Q5PLS8|RRMF_SALPA RecName: Full=Probable rRNA maturation factor YbeY
 gi|238689934|sp|B5BCD3|RRMF_SALPK RecName: Full=Probable rRNA maturation factor YbeY
 gi|56128460|gb|AAV77966.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094604|emb|CAR60125.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 157

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN       H     E  F + +  +I +  F +E  V + LV  D      L
Sbjct: 6   LDLQLACEN-------HAGLPDEAQFQRWLDGVIPQ--FQEEAEVTIRLV--DEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 113 VHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPY 150


>gi|126735011|ref|ZP_01750757.1| hypothetical protein RCCS2_14079 [Roseobacter sp. CCS2]
 gi|126715566|gb|EBA12431.1| hypothetical protein RCCS2_14079 [Roseobacter sp. CCS2]
          Length = 166

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 18/162 (11%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           VE+  WGD   +  L ++    A+  L      ++ ++ E+S++  D  RI  LN  +RG
Sbjct: 7   VEDPRWGD---INALAQIATDAALERL-----GLESSVFEISVLACDDARIAVLNEGFRG 58

Query: 77  IDKPTNVLSFPT--AFASSDGCSSLM--------LGDIVLAYEIIEIEANVLGKEFENHL 126
             KPTNVLS+P+    A+ DG   L         LGDI +A++    EA   GK  ++H 
Sbjct: 59  KPKPTNVLSWPSDERAAAIDGEMPLAPRPGPDNELGDIAIAFDTCTREAAEAGKTMQDHT 118

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HL++HG LHLLG+DH  D+DA +MEGLE  IL  LGI DPY
Sbjct: 119 IHLLVHGTLHLLGFDHERDRDATLMEGLETEILGKLGIPDPY 160


>gi|294142166|ref|YP_003558144.1| hypothetical protein SVI_3395 [Shewanella violacea DSS12]
 gi|293328635|dbj|BAJ03366.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 158

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 15/170 (8%)

Query: 1   MSVKKVNLP-RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSL 59
           MS+   NL   LDLQIA++N      +  R   E+    A+ + +++         EL++
Sbjct: 1   MSLNHKNLELELDLQIAIDNK----SLPSREDFELWVHSALRDTMTQA--------ELTI 48

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
              D    +TLN  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    
Sbjct: 49  RIVDKAESQTLNSSYRGKDKPTNVLSFP--FEAPPEIDIPLLGDLVICAPVVEFEAKQQN 106

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           K  + H  H+++HG LHLLGYDH+ D +A  ME LE  ++E LG N+PY+
Sbjct: 107 KSLKAHWAHMVVHGCLHLLGYDHIQDAEAEEMESLETQLIEKLGFNNPYK 156


>gi|16764045|ref|NP_459660.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167990678|ref|ZP_02571778.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|17865774|sp|O87574|RRMF_SALTY RecName: Full=Probable rRNA maturation factor YbeY
 gi|16419182|gb|AAL19619.1| putative metal-dependent hydrolase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|205330884|gb|EDZ17648.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261245940|emb|CBG23742.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992404|gb|ACY87289.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157268|emb|CBW16756.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911700|dbj|BAJ35674.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321226248|gb|EFX51299.1| metal-dependent hydrolase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323128985|gb|ADX16415.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332987612|gb|AEF06595.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 157

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN       H     E  F + +  +I +  F +E  V + LV  D      L
Sbjct: 6   LDLQLACEN-------HAGLPDEAQFQRWLDGVIPQ--FQEEAEVTIRLV--DEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPAGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 113 VHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPY 150


>gi|261341272|ref|ZP_05969130.1| putative metalloprotease [Enterobacter cancerogenus ATCC 35316]
 gi|288316577|gb|EFC55515.1| putative metalloprotease [Enterobacter cancerogenus ATCC 35316]
          Length = 155

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   DE   +T  + V  +          F +E+ V + LV  D      
Sbjct: 6   LDLQLACEDNSGMPDEAQFQTWLDAVIPQ----------FQEESEVTIRLV--DEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  + H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPGMEMPLLGDLIICRQVVEQEAKEQQKPLDAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH+DD +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIDDDEAEEMESLETEIMLALGYEDPY 150


>gi|307249902|ref|ZP_07531876.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|306858091|gb|EFM90173.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
          Length = 163

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 8/163 (4%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P +DLQIA EN+   +   L    + V  +A+++      F +    E+++   D  
Sbjct: 1   MTTPIIDLQIAAENS--ENLPSLEQFTQWV-QRALAHEAQTEDFPE---TEITIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA       E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLESH 112

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 113 WTHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|156934830|ref|YP_001438746.1| putative metalloprotease [Cronobacter sakazakii ATCC BAA-894]
 gi|166228427|sp|A7MQS7|RRMF_ENTS8 RecName: Full=Probable rRNA maturation factor
 gi|156533084|gb|ABU77910.1| hypothetical protein ESA_02677 [Cronobacter sakazakii ATCC BAA-894]
          Length = 155

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E+     DE   +T    V  +          F +E+ V + LV  D      
Sbjct: 6   LDLQVACEDTTGLPDEAQFQTWLNAVVPQ----------FQEESEVTVRLV--DEAESHD 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG+DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H+
Sbjct: 54  LNLTYRGMDKPTNVLSFP--FEAPPGIDMPLLGDLIICRQVVEREAREQEKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  MEG+E  I+  LG +DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEGIETEIMLALGFDDPY 150


>gi|226331002|ref|ZP_03806520.1| hypothetical protein PROPEN_04932 [Proteus penneri ATCC 35198]
 gi|225201797|gb|EEG84151.1| hypothetical protein PROPEN_04932 [Proteus penneri ATCC 35198]
          Length = 155

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A EN      E    T  E V  +             + + E+++   D      
Sbjct: 6   LDLQVASENTQGLPTEAQFMTWLEAVLPQF------------QPVSEVTIRIVDEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEKEATEQSKTVEEHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +IHG LHLLGYDH++D +A  MEGLE  IL++LG  DPY
Sbjct: 112 VIHGCLHLLGYDHIEDDEAEEMEGLETEILQNLGYADPY 150


>gi|293397292|ref|ZP_06641564.1| metal-dependent hydrolase [Serratia odorifera DSM 4582]
 gi|291420210|gb|EFE93467.1| metal-dependent hydrolase [Serratia odorifera DSM 4582]
          Length = 157

 Score =  113 bits (283), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLC-EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA E        H   L  E  F + +  ++ +  F  E  V + LV  D      
Sbjct: 6   LDLQIACE--------HANGLPDEAAFQRWLEGVLPQ--FQAEAEVTIRLV--DEAESHQ 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAVEQGKALEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGLGYQDPY 150


>gi|212712960|ref|ZP_03321088.1| hypothetical protein PROVALCAL_04058 [Providencia alcalifaciens DSM
           30120]
 gi|212684438|gb|EEB43966.1| hypothetical protein PROVALCAL_04058 [Providencia alcalifaciens DSM
           30120]
          Length = 155

 Score =  113 bits (283), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 92/158 (58%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA EN        L T  E +F + V+ ++ K  F  E+  E+++   D      L
Sbjct: 6   LDLQIASENT-----AGLPT--EAMFQRWVNAVLPK--FQAES--EVTIRVVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAAEQQKSEEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  MEGLE  IL ++G  DPY
Sbjct: 113 VHGCLHLLGYDHIEDDEAEEMEGLETEILAEMGYADPY 150


>gi|303252387|ref|ZP_07338553.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247668|ref|ZP_07529709.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|302648846|gb|EFL79036.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855836|gb|EFM87998.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
          Length = 163

 Score =  113 bits (282), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE-NIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++     ++    E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESYELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDVEAEEMEGLETEIMQSLGFEDPY 155


>gi|260913090|ref|ZP_05919572.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632677|gb|EEX50846.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 156

 Score =  113 bits (282), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN    + +      +    +AV   +S         VE+++   D      L
Sbjct: 6   IDLQIATENT---ENLPTEAQIQEWANRAVQPELSD--------VEMTVRIVDEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           NF YRG DKPTNVLSFP  F   D     +LGD+V+  +++E EA   GK    H  H++
Sbjct: 55  NFTYRGKDKPTNVLSFP--FECPDEVELGLLGDLVICRQVVEKEAEEQGKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMENLETEIMQSLGFEDPY 150


>gi|92114457|ref|YP_574385.1| hypothetical protein Csal_2336 [Chromohalobacter salexigens DSM
           3043]
 gi|122419590|sp|Q1QV22|RRMF_CHRSD RecName: Full=Probable rRNA maturation factor
 gi|91797547|gb|ABE59686.1| protein of unknown function UPF0054 [Chromohalobacter salexigens
           DSM 3043]
          Length = 154

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 14/162 (8%)

Query: 9   PRLDLQIAVENA--LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           P +D Q+A+E A  L   +  L      V A+              +  ELS+ F  +  
Sbjct: 3   PDIDRQVALETATELLPTQADLEAWVGAVLARHPDT----------DRHELSVRFVTADE 52

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            + LN +YRG DKPTNVLSFP  F +  G    +LGD+ + + ++  EA   GK   +H 
Sbjct: 53  SQALNRDYRGKDKPTNVLSFP--FEAPPGLPLALLGDLAICHAVVVDEAAEQGKPLAHHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H++IHG LHLLGYDH+DD++A  ME LER +L    I DPY
Sbjct: 111 AHMVIHGTLHLLGYDHIDDREAEEMEALERELLAHFAIGDPY 152


>gi|163739045|ref|ZP_02146458.1| hypothetical protein RGBS107_09406 [Phaeobacter gallaeciensis
           BS107]
 gi|161387850|gb|EDQ12206.1| hypothetical protein RGBS107_09406 [Phaeobacter gallaeciensis
           BS107]
          Length = 176

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 91/172 (52%), Gaps = 20/172 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYF-VKENIVELSLVFTDSHRIETLN 71
           L I++E+  W D        + + A         G+F +  +  ELSL+  D  RI  LN
Sbjct: 3   LDISIEDTRWQDADLTTHAVQAIHAVL-------GHFGLDADDCELSLLACDDARIMELN 55

Query: 72  FEYRGIDKPTNVLSFPTAFASS------------DGCSSLMLGDIVLAYEIIEIEANVLG 119
            E+R   KPTNVLS+P    SS            D    + LGDI +AYE    EA   G
Sbjct: 56  TEFRQKAKPTNVLSWPAEDLSSEEAGDEPLLPEADFTGEIPLGDIAIAYETCAREAEDAG 115

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           K   +HL HLI+HG LHLLGYDH+ D DA +ME LE  IL  +GI+DPY +D
Sbjct: 116 KSLADHLRHLIVHGVLHLLGYDHIRDPDATLMERLEVQILGKMGIDDPYTLD 167


>gi|197284345|ref|YP_002150217.1| metalloprotease [Proteus mirabilis HI4320]
 gi|227358511|ref|ZP_03842836.1| metal-dependent hydrolase [Proteus mirabilis ATCC 29906]
 gi|238693170|sp|B4EV26|RRMF_PROMH RecName: Full=Probable rRNA maturation factor
 gi|194681832|emb|CAR41113.1| conserved hypothetical protein [Proteus mirabilis HI4320]
 gi|227161222|gb|EEI46296.1| metal-dependent hydrolase [Proteus mirabilis ATCC 29906]
          Length = 155

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A EN      E    T  E V  +             + I E+++   D      
Sbjct: 6   LDLQVATENTQGLPSEAQFITWLEAVLPQF------------QPISEVTIRIVDEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D+PTNVLSFP  F +       +LGD+++  +++E EA+   K  E H  H+
Sbjct: 54  LNLTYRGKDRPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEKEADEQNKTVEEHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +IHG LHLLGYDH++D +A  MEGLE  IL+ LG  DPY
Sbjct: 112 VIHGCLHLLGYDHIEDDEAEEMEGLETEILQKLGYEDPY 150


>gi|229529945|ref|ZP_04419335.1| hypothetical protein VCG_003049 [Vibrio cholerae 12129(1)]
 gi|229333719|gb|EEN99205.1| hypothetical protein VCG_003049 [Vibrio cholerae 12129(1)]
 gi|327483684|gb|AEA78091.1| metal-dependent hydrolase [Vibrio cholerae LMA3894-4]
          Length = 154

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 92/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E  FA  ++  I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAE--FALWLTRTITP--FQPQ--AEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++D+G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQDMGFTDPY 149


>gi|163741714|ref|ZP_02149104.1| hypothetical protein RG210_04075 [Phaeobacter gallaeciensis 2.10]
 gi|161384887|gb|EDQ09266.1| hypothetical protein RG210_04075 [Phaeobacter gallaeciensis 2.10]
          Length = 176

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 92/174 (52%), Gaps = 20/174 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYF-VKENIVELSLVFTDSHRIET 69
           + L I++E+  W D        + + A         G+F +  +  ELSL+  D  RI  
Sbjct: 1   MTLDISIEDTRWQDADLTTHAVQAIHAVL-------GHFGLDADDCELSLLACDDARIME 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASS------------DGCSSLMLGDIVLAYEIIEIEANV 117
           LN E+R   KPTNVLS+P    SS            D    + LGDI +AYE    EA  
Sbjct: 54  LNTEFRQKAKPTNVLSWPVEDLSSEEAGDEPLLPEADFTGEIPLGDIAIAYETCAREAED 113

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            GK   +HL HLI+HG LHLLGYDH+ D DA +ME LE  IL  +GI+DPY +D
Sbjct: 114 AGKSLADHLRHLIVHGVLHLLGYDHIRDPDATLMERLEVQILGKMGIDDPYTLD 167


>gi|86136019|ref|ZP_01054598.1| hypothetical protein MED193_17889 [Roseobacter sp. MED193]
 gi|85826893|gb|EAQ47089.1| hypothetical protein MED193_17889 [Roseobacter sp. MED193]
          Length = 170

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 92/171 (53%), Gaps = 18/171 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I +E++ W  E  L  L       A+ +     + +     E++L+  D  +I  LN 
Sbjct: 3   LEITIEDSRW-QEAGLEALAHQAVGAALGH-----FGLDPEDCEIALLACDDDQIAGLNA 56

Query: 73  EYRGIDKPTNVLSFPT------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           E+R    PTNVLS+P             A   +D    + LGDI +AY+    EA+   K
Sbjct: 57  EFREKPVPTNVLSWPAEDLAASEPGGQPAVPEADFTGEIPLGDIAIAYDTCLREADAANK 116

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +HL HLI+HG LHLLGYDH+ D DA VMEGLE  IL +LG++DPY VD
Sbjct: 117 PLADHLRHLIVHGVLHLLGYDHISDLDATVMEGLEVEILGNLGLDDPYTVD 167


>gi|332140831|ref|YP_004426569.1| hypothetical protein MADE_1007145 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693281|sp|B4S0S0|RRMF_ALTMD RecName: Full=Probable rRNA maturation factor
 gi|327550853|gb|AEA97571.1| hypothetical protein MADE_1007145 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 158

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 2/116 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++ FTD    ++LN EYRG  KPTNVLSFP  F +  G    +LGD+V+   +I  EA
Sbjct: 44  EVTIRFTDEAESQSLNSEYRGKHKPTNVLSFP--FEAPPGIEINLLGDLVICAPVISREA 101

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
               K+  +H  H+ +HG LHL+GYDH+DD +A  MEG E  IL  LGI++PY+ D
Sbjct: 102 EEQDKQVSDHYAHMTVHGLLHLMGYDHIDDAEAEEMEGKEIDILAQLGIDNPYDAD 157


>gi|291616692|ref|YP_003519434.1| YbeY [Pantoea ananatis LMG 20103]
 gi|291151722|gb|ADD76306.1| YbeY [Pantoea ananatis LMG 20103]
 gi|327393117|dbj|BAK10539.1| hypothetical UPF0054 protein YbeY [Pantoea ananatis AJ13355]
          Length = 157

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E     D +   +  +     AV+       F  E+ V + LV  D      L
Sbjct: 6   LDLQLACEQT---DNLPTESQFQRWLEAAVTP------FQPESEVTIRLV--DEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAQEQGKTPEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH++D +A  MEG+E  I+  LG  DPY
Sbjct: 113 IHGTLHLLGYDHIEDSEAEEMEGIETEIMLALGYPDPY 150


>gi|322514461|ref|ZP_08067501.1| metal-dependent hydrolase [Actinobacillus ureae ATCC 25976]
 gi|322119624|gb|EFX91692.1| metal-dependent hydrolase [Actinobacillus ureae ATCC 25976]
          Length = 163

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 8/163 (4%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P +DLQIA EN+   +   L    + V  +A+++      F +    E+++   D  
Sbjct: 1   MTTPIIDLQIAAENS--ENLPSLEQFTQWV-QRALAHKAQTEDFPE---TEITIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+++   ++E EA       E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRHVVEKEAQEQQISLESH 112

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 113 WAHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|157376605|ref|YP_001475205.1| putative metalloprotease [Shewanella sediminis HAW-EB3]
 gi|189040151|sp|A8FZ04|RRMF_SHESH RecName: Full=Probable rRNA maturation factor
 gi|157318979|gb|ABV38077.1| protein of unknown function UPF0054 [Shewanella sediminis HAW-EB3]
          Length = 158

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 87/159 (54%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A+EN+    + +          K ++              EL++   D    + L
Sbjct: 12  LDLQLAIENSQLPSKQNFELWVRTALPKTMAE------------AELTIRIVDEAESQEL 59

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++   ++E+EA    K  + H  H++
Sbjct: 60  NSTYRGKDKPTNVLSFP--FEAPPEIEIPLLGDLIICAPVVELEALQQNKPLQAHWAHMV 117

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D +A  ME LE  ++E LG N+PY+
Sbjct: 118 VHGCLHLLGYDHINDAEAEEMESLETQLVESLGFNNPYK 156


>gi|147673894|ref|YP_001216433.1| putative metalloprotease [Vibrio cholerae O395]
 gi|153827447|ref|ZP_01980114.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153831226|ref|ZP_01983893.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|183179697|ref|ZP_02957908.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|262168626|ref|ZP_06036321.1| predicted metal-dependent hydrolase [Vibrio cholerae RC27]
 gi|172047421|sp|A5F2X4|RRMF_VIBC3 RecName: Full=Probable rRNA maturation factor
 gi|146315777|gb|ABQ20316.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148873296|gb|EDL71431.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149738624|gb|EDM52977.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|183013108|gb|EDT88408.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|227012777|gb|ACP08987.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|262022744|gb|EEY41450.1| predicted metal-dependent hydrolase [Vibrio cholerae RC27]
          Length = 154

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 92/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E  FA  +S  I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAE--FALWLSRTITP--FQPQ--AEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|304320424|ref|YP_003854067.1| hypothetical protein PB2503_04252 [Parvularcula bermudensis
           HTCC2503]
 gi|303299326|gb|ADM08925.1| hypothetical protein PB2503_04252 [Parvularcula bermudensis
           HTCC2503]
          Length = 158

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 70/115 (60%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++L  TD   ++ LN  +RG D PTNVLSFP    S+     L LGDI +AY +   EA 
Sbjct: 40  IALRLTDDTELQALNKSFRGKDTPTNVLSFPADPFSTPPGEDLFLGDIAIAYGVCAREAE 99

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
                 + HL HLI+HGFLHLLGYDH  D DA VME LE ++++ LG  +PY  D
Sbjct: 100 ARAFPLDRHLAHLILHGFLHLLGYDHQSDADAAVMEDLEATLMDRLGYGNPYAGD 154


>gi|254486624|ref|ZP_05099829.1| conserved hypothetical protein TIGR00043 [Roseobacter sp. GAI101]
 gi|214043493|gb|EEB84131.1| conserved hypothetical protein TIGR00043 [Roseobacter sp. GAI101]
          Length = 171

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 91/171 (53%), Gaps = 18/171 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L I  E+  W   + L TL E      + +L      +  ++ E++++  D  RI  LN 
Sbjct: 4   LDIVEEDPRWA-ALDLETLAESALITTLKHL-----NLDPDVSEITILACDDARIADLNA 57

Query: 73  EYRGIDKPTNVLSFPT--AFASSDGCSSLM----------LGDIVLAYEIIEIEANVLGK 120
           ++RG   PTNVLS+P     A+ DG   L           LGDI ++Y+    EA   GK
Sbjct: 58  DFRGKPTPTNVLSWPADERGAAQDGGLPLTVTADFDGMLELGDIAISYDTCAKEARAAGK 117

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +H+ HLIIHG LHLLGYDH  D DA +MEG+E  IL  LG++DPY  D
Sbjct: 118 SMTDHVTHLIIHGTLHLLGYDHDRDADATLMEGIEVEILGKLGLDDPYRED 168


>gi|86747718|ref|YP_484214.1| hypothetical protein RPB_0592 [Rhodopseudomonas palustris HaA2]
 gi|123004691|sp|Q2J2K7|RRMF_RHOP2 RecName: Full=Probable rRNA maturation factor
 gi|86570746|gb|ABD05303.1| Protein of unknown function UPF0054 [Rhodopseudomonas palustris
           HaA2]
          Length = 195

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 74/120 (61%), Gaps = 6/120 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS------LMLGDIVLAY 108
            EL+++ TD   I  LN  YRG DKPTNVLSFP       G +        +LGDI +AY
Sbjct: 69  AELAVMLTDDDGIRALNASYRGQDKPTNVLSFPAPQPDYQGAAQGSDVAPKLLGDIAIAY 128

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           + +  EA+  GK F++HL HL +HGFLHL+GYDH  D +A  ME  ER IL  LGI DPY
Sbjct: 129 QTVRREADDEGKRFDHHLSHLAVHGFLHLVGYDHETDAEAETMEAAERRILAGLGIPDPY 188


>gi|146329108|ref|YP_001210119.1| hypothetical protein DNO_1243 [Dichelobacter nodosus VCS1703A]
 gi|172047331|sp|A5EXA5|RRMF_DICNV RecName: Full=Probable rRNA maturation factor
 gi|146232578|gb|ABQ13556.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
          Length = 155

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 74/114 (64%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           +E+++   D+  I  LN EYRG + PTNVLSFP  +   +     +LGDIV+A +I+  E
Sbjct: 42  LEVTIRLVDNDEITELNAEYRGKNAPTNVLSFPCDWDLPE--EPRLLGDIVIAVQIVNQE 99

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K+ E H  H+ IHG LHLL YDH+++K+A +ME LER+IL  LG  DPY
Sbjct: 100 AKAQKKKMEQHWAHMTIHGLLHLLDYDHIEEKEAQIMEDLERTILAQLGFPDPY 153


>gi|15602910|ref|NP_245982.1| putative metalloprotease [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431990|sp|P57900|RRMF_PASMU RecName: Full=Probable rRNA maturation factor
 gi|12721379|gb|AAK03129.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 158

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+++   D      LN  YRG DKPTNVLSFP  F   D     +LGD+V+  +++E E
Sbjct: 39  VEMTVRIVDEAESHDLNLTYRGKDKPTNVLSFP--FECPDEVELSLLGDLVICRQVVEKE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK    H  H+++HG LHLLGYDH++D +A  MEGLE  I++ LG +DPY
Sbjct: 97  AEEQGKPLMAHWAHMVVHGCLHLLGYDHIEDAEAEEMEGLETEIMQSLGFDDPY 150


>gi|145298101|ref|YP_001140942.1| hypothetical protein ASA_1072 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166228140|sp|A4SJX2|RRMF_AERS4 RecName: Full=Probable rRNA maturation factor
 gi|142850873|gb|ABO89194.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 154

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E E
Sbjct: 38  AEVTVRIVDEAESRELNLTYRGKDKPTNVLSFP--FEAPPGMELPLLGDLVICRQVVEQE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K  E H  H+++HG LHLLGYDH++D +A  ME LER I+++LG  DPY
Sbjct: 96  ATEQNKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEQLERDIMQELGFADPY 149


>gi|300722330|ref|YP_003711615.1| putative metal-dependent hydrolase [Xenorhabdus nematophila ATCC
           19061]
 gi|297628832|emb|CBJ89410.1| putative metal-dependent hydrolase [Xenorhabdus nematophila ATCC
           19061]
          Length = 155

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 93/161 (57%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA EN     E       E +F + +  ++ +  F  E+ V + LV  D      L
Sbjct: 6   LDLQIACENPKGLPE-------EALFQRWLEGVLPQ--FQAESEVTIRLV--DEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVL+FP  F S       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLTFP--FESPPEIELPLLGDLIICRQVVEKEAEEQQKTVEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH+D+ +A  ME LE  IL+ +G +DPY+++
Sbjct: 113 VHGSLHLLGYDHIDNDEAEEMEFLETEILKKMGYSDPYQIE 153


>gi|288959690|ref|YP_003450031.1| metal-dependent hydrolase [Azospirillum sp. B510]
 gi|288911998|dbj|BAI73487.1| metal-dependent hydrolase [Azospirillum sp. B510]
          Length = 168

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 75/124 (60%), Gaps = 3/124 (2%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDI 104
           Y  +E   ELS+V  D   +  LN +YRG DKPTNVLSF    A          +MLGD+
Sbjct: 36  YDDEEGPAELSVVLADDALVHQLNRDYRGKDKPTNVLSFALTEAEEPEPEEGMPVMLGDV 95

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +LA+E +  EA+  GK  E+HL HL++HG LHLLGYDH  D +A  ME LE  +L   GI
Sbjct: 96  ILAFETVVREASEQGKSLEDHLTHLVMHGVLHLLGYDHETDDEAEEMEALETRLLASFGI 155

Query: 165 NDPY 168
            DPY
Sbjct: 156 ADPY 159


>gi|229523248|ref|ZP_04412655.1| hypothetical protein VIF_000104 [Vibrio cholerae TM 11079-80]
 gi|262190519|ref|ZP_06048763.1| predicted metal-dependent hydrolase [Vibrio cholerae CT 5369-93]
 gi|229339611|gb|EEO04626.1| hypothetical protein VIF_000104 [Vibrio cholerae TM 11079-80]
 gi|262033592|gb|EEY52086.1| predicted metal-dependent hydrolase [Vibrio cholerae CT 5369-93]
          Length = 154

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E  FA  ++  I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAE--FALWLTRTITP--FQPQ--AEVTIRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|161504168|ref|YP_001571280.1| putative metalloprotease [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189041074|sp|A9MKB9|RRMF_SALAR RecName: Full=Probable rRNA maturation factor YbeY
 gi|160865515|gb|ABX22138.1| hypothetical protein SARI_02274 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 155

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN       H     E  F + +  +I +  F + + V + LV  D      L
Sbjct: 6   LDLQLACEN-------HSGLPDEAQFQRWLDGVIPQ--FQEASEVTIRLV--DEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQDKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 113 VHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPY 150


>gi|110636245|ref|YP_676453.1| hypothetical protein Meso_3921 [Mesorhizobium sp. BNC1]
 gi|123161515|sp|Q11BD7|RRMF_MESSB RecName: Full=Probable rRNA maturation factor
 gi|110287229|gb|ABG65288.1| protein of unknown function UPF0054 [Chelativorans sp. BNC1]
          Length = 163

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 71/114 (62%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
             LS++FTD   +  LN  +RG DKPTNVLSFP   +     +    GDI L YE +  E
Sbjct: 49  ASLSVLFTDDAEMRALNARFRGKDKPTNVLSFPAPDSMVPPGTPRHFGDIALGYETVSRE 108

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK FE+HL HL++HGFLHL G+DH  + +A  ME LER IL+ L I DPY
Sbjct: 109 AKEEGKSFEHHLTHLVVHGFLHLAGHDHETEVEAEEMEQLEREILQSLAIGDPY 162


>gi|163752488|ref|ZP_02159677.1| hypothetical protein KT99_21054 [Shewanella benthica KT99]
 gi|161327632|gb|EDP98827.1| hypothetical protein KT99_21054 [Shewanella benthica KT99]
          Length = 158

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 89/170 (52%), Gaps = 15/170 (8%)

Query: 1   MSVKKVNLP-RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSL 59
           MS+   NL   LDLQ+A +N     +        +     +            N  EL++
Sbjct: 1   MSLNHNNLELDLDLQVATDNERLPSQEDFELWVRIALRDTM------------NQAELTI 48

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
              D    +TLN  YRG DKPTNVLSFP  F +       +LGD+++   ++E EA    
Sbjct: 49  RIVDEAESQTLNSSYRGKDKPTNVLSFP--FEAPPEIDIPLLGDLIICAPVVEFEAKQQN 106

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           K  ++H  H+++HG LHLLGYDH+ D +A  ME LE  ++E LG N+PY+
Sbjct: 107 KSLQSHWAHMVVHGCLHLLGYDHIQDAEAEEMESLETQLIESLGFNNPYK 156


>gi|218708743|ref|YP_002416364.1| putative metalloprotease [Vibrio splendidus LGP32]
 gi|254806592|sp|B7VKG1|RRMF_VIBSL RecName: Full=Probable rRNA maturation factor
 gi|218321762|emb|CAV17717.1| Hypothetical protein VS_0722 [Vibrio splendidus LGP32]
          Length = 153

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN      +      ++   K +          +EN  EL++   D+     
Sbjct: 4   ELDLQLAVENE---QGLPTEQDIQLWLDKTIPQF-------QEN-AELTVRIVDTQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHEYRGKDKPTNVLSFP--FEAPPGIELDLLGDLIICRQVVEKEAEEQSKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQSMGFEDPY 149


>gi|221134936|ref|ZP_03561239.1| hypothetical protein GHTCC_08396 [Glaciecola sp. HTCC2999]
          Length = 162

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 6/161 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+Q A+       E   + L + +  K V+++++      +++ EL++ F DS   ++L
Sbjct: 8   IDIQWAISEPSQLSETQAQ-LSDDIIIKTVTSVLNNH---NDSVGELTIRFVDSVESQSL 63

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  DKPTNVLSFP      D   S +LGD+++   +++ EA    K   +H  HLI
Sbjct: 64  NHTYRDKDKPTNVLSFPAEIP--DFIESTLLGDLIICDAVVKTEAKEQQKSLIHHYQHLI 121

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLG+DH+++ +A VME  E ++L +LGI+DPY+VD
Sbjct: 122 VHGTLHLLGFDHIENNEAVVMENHEIAVLNELGIDDPYQVD 162


>gi|121729827|ref|ZP_01682260.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229512947|ref|ZP_04402413.1| hypothetical protein VCB_000590 [Vibrio cholerae TMA 21]
 gi|121628431|gb|EAX60925.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229349840|gb|EEO14794.1| hypothetical protein VCB_000590 [Vibrio cholerae TMA 21]
          Length = 154

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E  FA  ++  I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAE--FALWLTRTITP--FQPQ--AEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|251790530|ref|YP_003005251.1| putative metalloprotease [Dickeya zeae Ech1591]
 gi|247539151|gb|ACT07772.1| protein of unknown function UPF0054 [Dickeya zeae Ech1591]
          Length = 161

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA E +L    E   +   E V  +             + + E+++   D      
Sbjct: 6   LDLQIASEQSLGLPSEADFQRWLEAVLPQF------------QEVAEVTIRVVDEEESHH 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAVEQGKSTEEHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPY 150


>gi|15640976|ref|NP_230607.1| putative metalloprotease [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591013|ref|ZP_01678330.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153820004|ref|ZP_01972671.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153823312|ref|ZP_01975979.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227081134|ref|YP_002809685.1| hypothetical protein VCM66_0916 [Vibrio cholerae M66-2]
 gi|229505440|ref|ZP_04394950.1| hypothetical protein VCF_000648 [Vibrio cholerae BX 330286]
 gi|229510890|ref|ZP_04400369.1| hypothetical protein VCE_002297 [Vibrio cholerae B33]
 gi|229518011|ref|ZP_04407455.1| hypothetical protein VCC_002035 [Vibrio cholerae RC9]
 gi|229608459|ref|YP_002879107.1| metalloprotease [Vibrio cholerae MJ-1236]
 gi|254848091|ref|ZP_05237441.1| metalloprotease [Vibrio cholerae MO10]
 gi|255744743|ref|ZP_05418694.1| predicted metal-dependent hydrolase [Vibrio cholera CIRS 101]
 gi|262161123|ref|ZP_06030234.1| predicted metal-dependent hydrolase [Vibrio cholerae INDRE 91/1]
 gi|298498924|ref|ZP_07008731.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|26006919|sp|Q9KTE2|RRMF_VIBCH RecName: Full=Probable rRNA maturation factor
 gi|254807269|sp|C3LTK8|RRMF_VIBCM RecName: Full=Probable rRNA maturation factor
 gi|9655419|gb|AAF94122.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547123|gb|EAX57255.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|126509455|gb|EAZ72049.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519176|gb|EAZ76399.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227009022|gb|ACP05234.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229344726|gb|EEO09700.1| hypothetical protein VCC_002035 [Vibrio cholerae RC9]
 gi|229350855|gb|EEO15796.1| hypothetical protein VCE_002297 [Vibrio cholerae B33]
 gi|229357663|gb|EEO22580.1| hypothetical protein VCF_000648 [Vibrio cholerae BX 330286]
 gi|229371114|gb|ACQ61537.1| hypothetical protein VCD_003377 [Vibrio cholerae MJ-1236]
 gi|254843796|gb|EET22210.1| metalloprotease [Vibrio cholerae MO10]
 gi|255737774|gb|EET93168.1| predicted metal-dependent hydrolase [Vibrio cholera CIRS 101]
 gi|262028873|gb|EEY47526.1| predicted metal-dependent hydrolase [Vibrio cholerae INDRE 91/1]
 gi|297543257|gb|EFH79307.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 154

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E  FA  ++  I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAE--FALWLTRTITP--FQAQ--AEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPSGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|260773263|ref|ZP_05882179.1| predicted metal-dependent hydrolase [Vibrio metschnikovii CIP
           69.14]
 gi|260612402|gb|EEX37605.1| predicted metal-dependent hydrolase [Vibrio metschnikovii CIP
           69.14]
          Length = 154

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 17/161 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCE--VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
            LDLQIAVE     DE  L +  +  + F+ AV+   S+         E+++   D    
Sbjct: 4   ELDLQIAVE-----DEQGLPSFDDFLIWFSAAVTPFQSQA--------EVTIRIVDQAES 50

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN  YRG DKPTNVLSFP  F +       +LGD+V+  +++E EA    K    H  
Sbjct: 51  HQLNLNYRGKDKPTNVLSFP--FEAPAEIELDLLGDLVICRQVVEQEALEQEKPLMAHWA 108

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H+++HG LHLLGYDH+DD++A  ME LE  I++++G +DPY
Sbjct: 109 HMVVHGTLHLLGYDHIDDQEADEMEALETEIMQNMGFDDPY 149


>gi|110834797|ref|YP_693656.1| hypothetical protein ABO_1936 [Alcanivorax borkumensis SK2]
 gi|123345401|sp|Q0VN64|RRMF_ALCBS RecName: Full=Probable rRNA maturation factor
 gi|110647908|emb|CAL17384.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 175

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 87/165 (52%), Gaps = 13/165 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P +D+Q A +     DE HL   CE V   A    I+ G  V +    ++L   D  
Sbjct: 4   IPTPTVDIQWASDAPDAPDETHL---CEWVRHAA----IAAGGVVGD----ITLRIVDEE 52

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
            I TLN +YR  D PTNVLSFP        +G    ++GDI++   ++  EAN   K   
Sbjct: 53  EIRTLNRDYRDKDAPTNVLSFPFEMPEGLPEGAMDPLVGDIIICAAVVRREANEQHKPLV 112

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H  H++ HG LHLLGYDH+DD DA VME LE   L +LG  DPY
Sbjct: 113 AHWAHMVTHGVLHLLGYDHIDDDDAIVMETLEIRALGELGFPDPY 157


>gi|307245551|ref|ZP_07527638.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|307254505|ref|ZP_07536341.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307258964|ref|ZP_07540695.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|306853610|gb|EFM85828.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|306862555|gb|EFM94513.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306866988|gb|EFM98845.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
          Length = 163

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE-NIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++     ++    E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DK TNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESHELNLTYRGKDKSTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|88798162|ref|ZP_01113748.1| hypothetical protein MED297_12927 [Reinekea sp. MED297]
 gi|88778938|gb|EAR10127.1| hypothetical protein MED297_12927 [Reinekea sp. MED297]
          Length = 163

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 90/163 (55%), Gaps = 18/163 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA +              E  F + VS  +S GY   +  VE+S+    +   + L
Sbjct: 6   LDLQIATDAE--------NIPAEASFRQWVSAALS-GY---DREVEMSIRVVSAEESQDL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFENHL 126
           N  YRG DKPTNVLSFP  F +  G +      +LGD+V+   ++E EA    K   +H 
Sbjct: 54  NATYRGKDKPTNVLSFP--FEAPPGVADAGIDRLLGDLVICAPVVEEEAQAQRKHLSHHW 111

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            H+++HG LHLLGYDH++D +A  ME  ER+IL  L I DPY+
Sbjct: 112 AHMVVHGTLHLLGYDHIEDDEAEQMEQAERTILAALSIPDPYQ 154


>gi|260597075|ref|YP_003209646.1| metal-binding heat shock protein [Cronobacter turicensis z3032]
 gi|260216252|emb|CBA29173.1| Putative metalloprotease ESA_02677 [Cronobacter turicensis z3032]
          Length = 155

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E+     DE   +T    V  +          F +E+ V + LV  D      
Sbjct: 6   LDLQVACEDTSGLPDEAQFQTWLNAVVPQ----------FQEESEVTVRLV--DEAESHD 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG+DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 54  LNLTYRGMDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEREAREQEKPLAAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  MEG+E  I+  LG +DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEGIETEIMLALGFDDPY 150


>gi|153213843|ref|ZP_01949049.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124115677|gb|EAY34497.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 154

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E  FA  ++  I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAE--FALWLTRTITP--FQAQ--AEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|256821543|ref|YP_003145506.1| hypothetical protein Kkor_0317 [Kangiella koreensis DSM 16069]
 gi|256795082|gb|ACV25738.1| protein of unknown function UPF0054 [Kangiella koreensis DSM 16069]
          Length = 169

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 7/162 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A +++   DEI ++      F    +         +    E+++   +    + L
Sbjct: 9   LDLQVACDSSTVPDEIDIKQWLATAFEVEAAKFGRAKTLAQP--FEMTVRVVEQAESQAL 66

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLV 127
           N +YRG D PTNVLSFP  F   +G   L   +LGD+ +  E++E EA    KE  +H  
Sbjct: 67  NNDYRGKDNPTNVLSFP--FEMPEGIEGLELSILGDLAICAEVVEQEAAEQKKELRSHWT 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           H+++HG LHLLGYDH+ D +A  ME LE  IL  LG+ +PY+
Sbjct: 125 HMVVHGGLHLLGYDHIKDNEALEMESLEIEILAQLGVENPYQ 166


>gi|296103384|ref|YP_003613530.1| putative metalloprotease [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057843|gb|ADF62581.1| putative metalloprotease [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295096598|emb|CBK85688.1| conserved hypothetical protein TIGR00043 [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 155

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 89/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E+     E       E  F K +  +I +  F +E+ V + LV  D      L
Sbjct: 6   LDLQLACEDNSGMPE-------EAQFQKWLDAVIPQ--FQEESEVTIRLV--DEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAKEQQKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYEDPY 150


>gi|145630707|ref|ZP_01786486.1| hypothetical protein CGSHi22421_02154 [Haemophilus influenzae
           R3021]
 gi|144983833|gb|EDJ91283.1| hypothetical protein CGSHi22421_02154 [Haemophilus influenzae
           R3021]
          Length = 154

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A   +  +G     N VE+++   D    + L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATGAVQPEG-----NEVEMTVRIVDEAESQEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPY 150


>gi|308186035|ref|YP_003930166.1| metalloprotease [Pantoea vagans C9-1]
 gi|308056545|gb|ADO08717.1| Putative metalloprotease [Pantoea vagans C9-1]
          Length = 157

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 91/159 (57%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A +N A   DE          F + +S  ++   F  E+ V + LV  D      
Sbjct: 6   LDLQVACDNTADLPDEGQ--------FHRWLSAAVTP--FQPESEVTVRLV--DEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQGKSVEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  MEGLE  I+  LG  DPY
Sbjct: 112 VVHGTLHLLGYDHIEDDEADEMEGLETEIMLALGYPDPY 150


>gi|149186038|ref|ZP_01864352.1| predicted metal-dependent hydrolase [Erythrobacter sp. SD-21]
 gi|148830069|gb|EDL48506.1| predicted metal-dependent hydrolase [Erythrobacter sp. SD-21]
          Length = 161

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 81/143 (56%), Gaps = 8/143 (5%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---- 88
           EV+  KA   +    + +    +  SL+FT   ++  LN E+RG DKPTNVLSFP     
Sbjct: 17  EVISQKAYEAIAQVEFALAHPRLTTSLLFTSEEQVHELNKEWRGKDKPTNVLSFPMLERV 76

Query: 89  --AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-D 145
                 +DG    MLGDI LA+E  + EA+  G    +H  HL+IHGFLHL G+DHVD D
Sbjct: 77  DLIALEADGPPE-MLGDIALAFETCQREADEKGVSVRDHTAHLLIHGFLHLAGHDHVDSD 135

Query: 146 KDACVMEGLERSILEDLGINDPY 168
           + A  ME LE   L  LGI DPY
Sbjct: 136 EQAAAMEKLEIEALAKLGIADPY 158


>gi|290476184|ref|YP_003469084.1| putative metal-dependent hydrolase [Xenorhabdus bovienii SS-2004]
 gi|289175517|emb|CBJ82320.1| putative metal-dependent hydrolase [Xenorhabdus bovienii SS-2004]
          Length = 155

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA EN     +       E +F + + +++ +  F  E+ V + LV  D      L
Sbjct: 6   LDLQIACENPEGLPD-------EALFQRWLESILPQ--FQAESEVTIRLV--DEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAEEQQKTVEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH++D +A  ME LE  IL+ +G  DPY
Sbjct: 113 IHGSLHLLGYDHIEDDEAEEMESLETEILQKMGYADPY 150


>gi|253990621|ref|YP_003041977.1| metalloprotease [Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949]
 gi|253782071|emb|CAQ85235.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 155

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 93/159 (58%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV-FTDSHRIET 69
           LDLQIA EN+    E       E +F + +  ++ +  F  E+ V + +V  T+SH    
Sbjct: 6   LDLQIACENSQNLPE-------ETLFQRWLDGVLPQ--FQPESEVTIRIVDETESH---D 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPEVDLPLLGDLIICRQVVEKEAEEQQKTVEEHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH+ D +A  ME LE  I++ LG +DPY
Sbjct: 112 VVHGCLHLLGYDHIADDEAEEMESLETEIMQKLGYSDPY 150


>gi|117617448|ref|YP_857734.1| hypothetical protein AHA_3243 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|145558811|sp|A0KN83|RRMF_AERHH RecName: Full=Probable rRNA maturation factor
 gi|117558855|gb|ABK35803.1| conserved hypothetical protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 154

 Score =  110 bits (276), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E E
Sbjct: 38  AEVTVRIVDEAESNELNLTYRGKDKPTNVLSFP--FEAPPGLELPLLGDLVICRQVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK    H  H+++HG LHLLGYDH++D +A  ME LER I+++LG  DPY
Sbjct: 96  AAEQGKPLMAHWAHMVVHGSLHLLGYDHIEDDEAEEMETLERDIMQELGFADPY 149


>gi|261343535|ref|ZP_05971180.1| putative metalloprotease [Providencia rustigianii DSM 4541]
 gi|282568684|gb|EFB74219.1| putative metalloprotease [Providencia rustigianii DSM 4541]
          Length = 155

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 91/159 (57%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTL-CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA EN        +  L  E +F   V+ ++ K  F  E+  E+++   D      
Sbjct: 6   LDLQIASEN--------IEGLPSEAMFQHWVNAVLPK--FQAES--EVTIRIVDEAESHD 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVVEKEATEQQKSEEEHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  MEGLE  IL ++G  DPY
Sbjct: 112 VVHGCLHLLGYDHIEDDEAEEMEGLETEILAEMGYADPY 150


>gi|159043564|ref|YP_001532358.1| hypothetical protein Dshi_1015 [Dinoroseobacter shibae DFL 12]
 gi|189038542|sp|A8LSE3|RRMF_DINSH RecName: Full=Probable rRNA maturation factor
 gi|157911324|gb|ABV92757.1| protein of unknown function UPF0054 [Dinoroseobacter shibae DFL 12]
          Length = 181

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 95/182 (52%), Gaps = 20/182 (10%)

Query: 2   SVKKVNLPRLDLQIAVENALWGDEIHLRTLC-EVVFAKAVSNLISKGYFVKENIVELSLV 60
           +++  +  R  ++IA E+A W D + L  L    V A  V+  +    F      E+S++
Sbjct: 4   TIRPDDPARATVEIATEDAAW-DALDLEALAGRAVDATLVALDLPPAAF------EVSIL 56

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLM---------LGDIVLAY 108
             D  RI TLN E+RG   PTNVLS+P    + D   G   L          LGD+ LA+
Sbjct: 57  ACDDARIATLNGEFRGKPTPTNVLSWPAEDRAPDTPGGAPHLPDPGDPMAAELGDLALAH 116

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
                EA   GK   +H+ HLI+HG LHLLG+DH  D DA  MEGLE  IL+ L + +PY
Sbjct: 117 GTCAREAAEAGKPLADHVTHLIVHGTLHLLGFDHETDADAARMEGLEVKILQTLNMANPY 176

Query: 169 EV 170
           E 
Sbjct: 177 ET 178


>gi|103487640|ref|YP_617201.1| hypothetical protein Sala_2159 [Sphingopyxis alaskensis RB2256]
 gi|123078201|sp|Q1GR54|RRMF_SPHAL RecName: Full=Probable rRNA maturation factor
 gi|98977717|gb|ABF53868.1| protein of unknown function UPF0054 [Sphingopyxis alaskensis
           RB2256]
          Length = 168

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 75/122 (61%), Gaps = 8/122 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVL 106
           +VE+++  TD   + TLN ++RG DKPTNVLSFP        + A+SD    ++LGDIVL
Sbjct: 44  LVEVAVRLTDDAEVHTLNRDFRGRDKPTNVLSFPQVQNDLLESLANSDD-GEILLGDIVL 102

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
           A E    EA+  G     H  HLI+HG LHL+GYDH+DD  A  ME LE   L  LGI +
Sbjct: 103 ARETCAREADEKGVSLAAHATHLIVHGALHLVGYDHMDDVSAAAMEALEVKALASLGIAN 162

Query: 167 PY 168
           PY
Sbjct: 163 PY 164


>gi|86148577|ref|ZP_01066862.1| hypothetical protein MED222_02087 [Vibrio sp. MED222]
 gi|85833643|gb|EAQ51816.1| hypothetical protein MED222_02087 [Vibrio sp. MED222]
          Length = 153

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L T       + +   + K     +   EL++   D+     
Sbjct: 4   ELDLQLAVEN-----EQGLPT------EQDIQLWLDKTIPQFQESAELTVRIVDTQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGVELDLLGDLIICRQVVEKEAEEQSKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQTMGFEDPY 149


>gi|307545981|ref|YP_003898460.1| hypothetical protein HELO_3391 [Halomonas elongata DSM 2581]
 gi|307218005|emb|CBV43275.1| K07042 [Halomonas elongata DSM 2581]
          Length = 171

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++ F D+     LN +YR  D+PTNVLSFP  F S    +  +LGD+V+ + ++  EA
Sbjct: 42  ELTIRFVDAEESRHLNRDYRDRDRPTNVLSFP--FESPPTVALPLLGDLVICHPVVVDEA 99

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  H+++HG LHLLGYDH++D +A VME LER IL +LGI DPY
Sbjct: 100 ETQHKSLLDHYAHMVVHGTLHLLGYDHIEDDEAEVMEALEREILAELGIADPY 152


>gi|332288753|ref|YP_004419605.1| putative metalloprotease [Gallibacterium anatis UMN179]
 gi|330431649|gb|AEC16708.1| putative metalloprotease [Gallibacterium anatis UMN179]
          Length = 158

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E     D+ +L TL +  +        ++    +++ VE+++   D      L
Sbjct: 9   VDLQIASE-----DQSNLPTLQQFTY------WATQAVKPQQDNVEMTIRIVDEEESHHL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           NF YRG D+PTNVLSFP  F   +G +  +LGD+V+  +++E EA       E H  HL 
Sbjct: 58  NFTYRGKDRPTNVLSFP--FEVPEGIALPLLGDLVICRQVVEKEAQEQQISLEAHYAHLT 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  +G  DPY
Sbjct: 116 VHGCLHLLGYDHIEDDEAEEMENLETEIMLSMGYADPY 153


>gi|37197841|dbj|BAC93679.1| predicted metal-dependent hydrolase [Vibrio vulnificus YJ016]
          Length = 250

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+AVE     D+  L +      A+     + K     +   E+++   DS     L
Sbjct: 101 LDLQLAVE-----DQNGLPS------AQDFQTWLDKTIPPFQPQAEVTIRIVDSQESHQL 149

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H++
Sbjct: 150 NHDYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEQEAIEQDKPLMAHWAHMV 207

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 208 VHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFTDPY 245


>gi|311280445|ref|YP_003942676.1| hypothetical protein Entcl_3146 [Enterobacter cloacae SCF1]
 gi|308749640|gb|ADO49392.1| protein of unknown function UPF0054 [Enterobacter cloacae SCF1]
          Length = 155

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 91/158 (57%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN     E  L    E  F + +  +I +  F +E+ V + LV  D      L
Sbjct: 6   LDLQLACEN-----EAGLPQ--EAQFQRWLDAVIPQ--FQEESEVTVRLV--DDAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DK TNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H++
Sbjct: 55  NLTYRGKDKSTNVLSFP--FEAPPGMEMPLLGDLIICRQVVEREAEEQGKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG +DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYDDPY 150


>gi|16271980|ref|NP_438177.1| putative metalloprotease [Haemophilus influenzae Rd KW20]
 gi|145636793|ref|ZP_01792459.1| hypothetical protein CGSHiHH_06750 [Haemophilus influenzae PittHH]
 gi|145641868|ref|ZP_01797443.1| hypothetical protein CGSHiR3021_01322 [Haemophilus influenzae
           R3021]
 gi|260580692|ref|ZP_05848519.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|2495567|sp|P71335|RRMF_HAEIN RecName: Full=Probable rRNA maturation factor
 gi|60593985|pdb|1XAX|A Chain A, Nmr Structure Of Hi0004, A Putative Essential Gene Product
           From Haemophilus Influenzae
 gi|1572948|gb|AAC21683.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|145270091|gb|EDK10028.1| hypothetical protein CGSHiHH_06750 [Haemophilus influenzae PittHH]
 gi|145273490|gb|EDK13361.1| hypothetical protein CGSHiR3021_01322 [Haemophilus influenzae
           22.4-21]
 gi|260092754|gb|EEW76690.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 154

 Score =  110 bits (275), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A   +  +G     N VE+++   D      L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATGAVQPEG-----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA+   K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREASEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPY 150


>gi|307256716|ref|ZP_07538495.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|307261160|ref|ZP_07542836.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|306864764|gb|EFM96668.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|306869142|gb|EFN00943.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
          Length = 163

 Score =  110 bits (275), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE-NIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++     ++    E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DK TNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESHELNLTYRGKDKSTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDVEAEEMEGLETEIMQSLGFEDPY 155


>gi|126666979|ref|ZP_01737955.1| predicted metal-dependent hydrolase [Marinobacter sp. ELB17]
 gi|126628695|gb|EAZ99316.1| predicted metal-dependent hydrolase [Marinobacter sp. ELB17]
          Length = 158

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 87/164 (53%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +N   LDLQ+  + A    E   R   ++ +               +   E+++   D  
Sbjct: 1   MNFVTLDLQLVSDAANIPSEDQFRQWSQLAWQG-------------DEPTEVTIRIVDES 47

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            ++ LNF+YRG DKPTNVLSFP  F +  G   L+ GD+V+   I+  EA    K+   H
Sbjct: 48  EMQALNFQYRGKDKPTNVLSFP--FEAPAGIQILLAGDLVICAPIVAQEAREQYKDTHAH 105

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             H+IIHG LHL  YDH+DD +A  MEGLE  +L  +GI +PY+
Sbjct: 106 WAHMIIHGMLHLQSYDHIDDNEAEEMEGLEIRLLAQIGITNPYD 149


>gi|90420540|ref|ZP_01228447.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335268|gb|EAS49021.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 203

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 6/160 (3%)

Query: 11  LDLQIAVENALWGDEI--HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           L + + VE+  W D     +  +    F+ A + L   G  V E    +SL   D   + 
Sbjct: 18  LTVALTVEDPRWDDAGLGDIPAMAAETFSVAAARLGLPGDLVSE----ISLTLADDETVR 73

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+R  DKPTN+LSFP A  +       +LGD+++A+E +  EA+   K F +H  H
Sbjct: 74  AVNAEWRNKDKPTNILSFPMADLAPGERPGPLLGDLLVAFETVAREADEEAKAFADHFRH 133

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L++HGFLHL+G DH+ D +A  ME  E +IL + GI DPY
Sbjct: 134 LLVHGFLHLMGLDHMVDTEADDMEAAEIAILAEFGIADPY 173


>gi|296447883|ref|ZP_06889794.1| protein of unknown function UPF0054 [Methylosinus trichosporium
           OB3b]
 gi|296254624|gb|EFH01740.1| protein of unknown function UPF0054 [Methylosinus trichosporium
           OB3b]
          Length = 168

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 93/161 (57%), Gaps = 9/161 (5%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P +D  I V    W  +  L  L +      V+  ++     ++   ELS+ FTD   I 
Sbjct: 3   PSID--IIVTAPCWEQQTGLDELTQSTVRGCVA--VTAARLAQD--CELSVNFTDDATIR 56

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN ++RGIDKPTNVLSF T    +     L LGDIV+A+E +  EA+  GK FE HL H
Sbjct: 57  ELNAQWRGIDKPTNVLSFETPGPLA---RRLSLGDIVIAHETVAREADEQGKSFEAHLTH 113

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           LIIHGFLHL+GYDH   ++A  ME LER I   LG+ DPYE
Sbjct: 114 LIIHGFLHLIGYDHQAAREAEEMEALERRIAATLGLADPYE 154


>gi|301168606|emb|CBW28195.1| conserved protein [Haemophilus influenzae 10810]
          Length = 154

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A + +  +G     N VE+++   D      L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATAAIQPEG-----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY
Sbjct: 113 VHGCLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPY 150


>gi|320539650|ref|ZP_08039314.1| putative conserved protein [Serratia symbiotica str. Tucson]
 gi|320030262|gb|EFW12277.1| putative conserved protein [Serratia symbiotica str. Tucson]
          Length = 157

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 88/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA E++    DE   +   E V  +          F +E  V + LV  D      
Sbjct: 6   LDLQIACEDSNNLPDETAFQRWLEAVLLQ----------FQEEAEVTVRLV--DEAESNE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G +  +LGD+++  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPGIALPLLGDLIICRQVVEQEAAEQGKTSEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D  A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDAAEEMESLETEIMHGLGYPDPY 150


>gi|145629144|ref|ZP_01784943.1| hypothetical protein CGSHi22121_10090 [Haemophilus influenzae
           22.1-21]
 gi|145633443|ref|ZP_01789173.1| hypothetical protein CGSHi3655_04405 [Haemophilus influenzae 3655]
 gi|145639708|ref|ZP_01795311.1| hypothetical protein CGSHiII_09331 [Haemophilus influenzae PittII]
 gi|148825715|ref|YP_001290468.1| putative metalloprotease [Haemophilus influenzae PittEE]
 gi|166229102|sp|A5UBD4|RRMF_HAEIE RecName: Full=Probable rRNA maturation factor
 gi|144978647|gb|EDJ88370.1| hypothetical protein CGSHi22121_10090 [Haemophilus influenzae
           22.1-21]
 gi|144986006|gb|EDJ92608.1| hypothetical protein CGSHi3655_04405 [Haemophilus influenzae 3655]
 gi|145271265|gb|EDK11179.1| hypothetical protein CGSHiII_09331 [Haemophilus influenzae PittII]
 gi|148715875|gb|ABQ98085.1| hypothetical protein CGSHiEE_03300 [Haemophilus influenzae PittEE]
 gi|309750677|gb|ADO80661.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 154

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A + +  +G     N VE+++   D      L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATAAIQPEG-----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY
Sbjct: 113 VHGGLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPY 150


>gi|260582082|ref|ZP_05849877.1| metal-dependent hydrolase [Haemophilus influenzae NT127]
 gi|260094972|gb|EEW78865.1| metal-dependent hydrolase [Haemophilus influenzae NT127]
          Length = 154

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A   +  +G     N VE+++   D    + L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATGAVQPEG-----NEVEMTVRIVDEAESQEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFADPY 150


>gi|229525570|ref|ZP_04414975.1| hypothetical protein VCA_003202 [Vibrio cholerae bv. albensis
           VL426]
 gi|229339151|gb|EEO04168.1| hypothetical protein VCA_003202 [Vibrio cholerae bv. albensis
           VL426]
          Length = 154

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E  FA  +   I+   F  +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAE--FALWLIRTITP--FQPQ--AEVTIRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FETPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPY 149


>gi|50593431|gb|AAT79462.1| putative metal-dependent hydrolase [Agrobacterium luteum]
          Length = 186

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/121 (48%), Positives = 77/121 (63%), Gaps = 8/121 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVLA 107
           +E+S+  +D+  ++TLN  YRG DKPTNVLSFP          A++D   +L LGDI+LA
Sbjct: 63  IEVSVKLSDNAEVQTLNKAYRGKDKPTNVLSFPQIQPDLLDTLANTDDGEAL-LGDIILA 121

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
           YE    EA      F +H+ HLI+HG LHLLGYDH ++ DA VME  E + L  LGI +P
Sbjct: 122 YETCRDEAVAKDISFSSHITHLIVHGSLHLLGYDHENEVDAGVMENCEINALATLGIANP 181

Query: 168 Y 168
           Y
Sbjct: 182 Y 182


>gi|119386401|ref|YP_917456.1| hypothetical protein Pden_3693 [Paracoccus denitrificans PD1222]
 gi|145558815|sp|A1B8B6|RRMF_PARDP RecName: Full=Probable rRNA maturation factor
 gi|119376996|gb|ABL71760.1| protein of unknown function UPF0054 [Paracoccus denitrificans
           PD1222]
          Length = 174

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 87/163 (53%), Gaps = 15/163 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E+  W D   L  + E   A+AV   +    F      ++ ++  D  RI  LN 
Sbjct: 15  VDIVLEDDRWED-ADLPAMAERA-ARAVGEWLGLDAF------QVVVMGCDDARIAALNA 66

Query: 73  EYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           E+RG  KPTNVLS+P          A  +   +  LGDI ++Y+    EA   GK F +H
Sbjct: 67  EFRGKPKPTNVLSWPAVEFEAREPGAHPEPPGAEELGDIAISYDTCLREAEAQGKPFADH 126

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL++H  LHL GYDH+DD+DA  ME  ERSIL  LGI DPY
Sbjct: 127 ATHLLVHAMLHLAGYDHIDDEDAETMEDAERSILGKLGIPDPY 169


>gi|229845426|ref|ZP_04465556.1| putative metalloprotease [Haemophilus influenzae 6P18H1]
 gi|319896426|ref|YP_004134619.1| hypothetical protein HIBPF00040 [Haemophilus influenzae F3031]
 gi|229811622|gb|EEP47321.1| putative metalloprotease [Haemophilus influenzae 6P18H1]
 gi|317431928|emb|CBY80274.1| conserved protein [Haemophilus influenzae F3031]
          Length = 154

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A   +  +G     N VE+++   D      L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATGAVQPEG-----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPY 150


>gi|148981400|ref|ZP_01816396.1| hypothetical protein VSWAT3_09548 [Vibrionales bacterium SWAT-3]
 gi|145960892|gb|EDK26222.1| hypothetical protein VSWAT3_09548 [Vibrionales bacterium SWAT-3]
          Length = 153

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 87/159 (54%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L T  ++         + K     +   EL++   D+     
Sbjct: 4   ELDLQLAVEN-----EQGLPTEHDIQL------WLDKTIPQFQKSAELTIRIVDTEESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G     LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHEYRGKDKPTNVLSFP--FEAPPGIELDFLGDLIICRQVVEKEAEEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQAMGFEDPY 149


>gi|323499964|ref|ZP_08104922.1| metal-binding heat shock protein [Vibrio sinaloensis DSM 21326]
 gi|323314981|gb|EGA68034.1| metal-binding heat shock protein [Vibrio sinaloensis DSM 21326]
          Length = 155

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 17/161 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEV--VFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
            LDLQ+AVE     DE  L T  ++      AV+    +         E+++   D    
Sbjct: 4   ELDLQLAVE-----DESGLPTFDDIHLWLNSAVAKFQPQA--------EVTVRLVDEQES 50

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LNF+YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  
Sbjct: 51  HQLNFDYRGKDKPTNVLSFP--FEAPPGIEMDLLGDLIICRQVVEREAIEQQKPLMAHWA 108

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H+++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 109 HMVVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFLDPY 149


>gi|283834042|ref|ZP_06353783.1| putative metalloprotease YbeY [Citrobacter youngae ATCC 29220]
 gi|291070183|gb|EFE08292.1| putative metalloprotease YbeY [Citrobacter youngae ATCC 29220]
          Length = 157

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 90/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E     DE  L T  E  F   +  +I +  F +E+ V + LV  D      L
Sbjct: 6   LDLQLACE-----DESGLPT--ESQFQGWLDAVIPQ--FQEESEVTIRLV--DDAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DK TNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H++
Sbjct: 55  NLTYRGKDKSTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEKEAQEQGKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYEDPY 150


>gi|229047214|ref|NP_933708.2| putative metalloprotease [Vibrio vulnificus YJ016]
 gi|46577353|sp|Q7MN02|RRMF_VIBVY RecName: Full=Probable rRNA maturation factor
          Length = 154

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     D+  L +      A+     + K     +   E+++   DS     
Sbjct: 4   ELDLQLAVE-----DQNGLPS------AQDFQTWLDKTIPPFQPQAEVTIRIVDSQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEQEAIEQDKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFTDPY 149


>gi|192288881|ref|YP_001989486.1| hypothetical protein Rpal_0450 [Rhodopseudomonas palustris TIE-1]
 gi|192282630|gb|ACE99010.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           TIE-1]
          Length = 167

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/116 (52%), Positives = 76/116 (65%), Gaps = 3/116 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA--SSDGCSSLMLGDIVLAYEIIE 112
            EL+++ TD   I  LN  +R  DKPTNVLSFP A      DG    MLGDI +AY+ + 
Sbjct: 46  AELAVMLTDDDHIRQLNASFRDKDKPTNVLSFPAAQPEVQPDGAPR-MLGDIAIAYQTVR 104

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA+  GK F++HL HL +HGFLHL+GYDH  D++A  ME  ER+IL  LGI DPY
Sbjct: 105 READDEGKPFDHHLSHLAVHGFLHLVGYDHETDEEAEEMEDAERAILARLGIPDPY 160


>gi|254361290|ref|ZP_04977433.1| possible metal-dependent hydrolase [Mannheimia haemolytica PHL213]
 gi|261493920|ref|ZP_05990429.1| putative metal-dependent hydrolase [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496864|ref|ZP_05993233.1| putative metal-dependent hydrolase [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|153092786|gb|EDN73829.1| possible metal-dependent hydrolase [Mannheimia haemolytica PHL213]
 gi|261307481|gb|EEY08815.1| putative metal-dependent hydrolase [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261310423|gb|EEY11617.1| putative metal-dependent hydrolase [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 160

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 12/160 (7%)

Query: 11  LDLQIAVENA--LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           +DLQIA EN   L  ++     + + +  +A ++   +         E+++   D     
Sbjct: 6   IDLQIACENTENLPSEQQFYTWVQKALAVEAKTDDFPES--------EITIRIVDEAESH 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YRG DKPTNVLSFP  F + +G    +LGD+V+  +++E EA   G   E+H  H
Sbjct: 58  ELNLTYRGKDKPTNVLSFP--FEAPEGIEMPLLGDLVICRQVMEKEAEEQGISAESHWAH 115

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L IHG LHLLGYDH+++ +A  ME LE  I++ LG  DPY
Sbjct: 116 LAIHGTLHLLGYDHIEEDEAVEMESLETEIMQSLGYEDPY 155


>gi|320157149|ref|YP_004189528.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
 gi|319932461|gb|ADV87325.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
          Length = 154

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     D+  L +      A+     + K     +   E+++   DS     
Sbjct: 4   ELDLQLAVE-----DQNGLPS------AQDFQTWLDKTIPPFQPQAEVTIRIVDSQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEQEAIEQDKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFTDPY 149


>gi|68248555|ref|YP_247667.1| putative metalloprotease [Haemophilus influenzae 86-028NP]
 gi|148827164|ref|YP_001291917.1| putative metalloprotease [Haemophilus influenzae PittGG]
 gi|81337018|sp|Q4QPP0|RRMF_HAEI8 RecName: Full=Probable rRNA maturation factor
 gi|166228383|sp|A5UFH8|RRMF_HAEIG RecName: Full=Probable rRNA maturation factor
 gi|68056754|gb|AAX87007.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|148718406|gb|ABQ99533.1| hypothetical protein CGSHiGG_02480 [Haemophilus influenzae PittGG]
 gi|309972862|gb|ADO96063.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 154

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A   +  +G     N VE+++   D      L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATGAVQPEG-----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY
Sbjct: 113 VHGCLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPY 150


>gi|27363747|ref|NP_759275.1| metal-binding heat shock protein [Vibrio vulnificus CMCP6]
 gi|29428187|sp|Q8DFE6|RRMF_VIBVU RecName: Full=Probable rRNA maturation factor
 gi|27359863|gb|AAO08802.1| predicted metal-dependent hydrolase [Vibrio vulnificus CMCP6]
          Length = 154

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     D+  L +      A+     + K     +   E+++   DS     
Sbjct: 4   ELDLQLAVE-----DQNGLPS------AQDFQTWLDKTIPPFQPQAEVTIRIVDSQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEQEAIDQDKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFTDPY 149


>gi|33152458|ref|NP_873811.1| putative metalloprotease [Haemophilus ducreyi 35000HP]
 gi|46577397|sp|Q7VLN5|RRMF_HAEDU RecName: Full=Probable rRNA maturation factor
 gi|33148681|gb|AAP96200.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 158

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 87/165 (52%), Gaps = 18/165 (10%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKEN-----IVELSLVFTD 63
           P +DLQIA EN+             +  A+  S+ +      +       + EL++   D
Sbjct: 3   PIIDLQIASENS-----------QGLPSAQQFSDWVKHALTYEAQTSNIPLTELTIRIVD 51

Query: 64  SHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
                 LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +I+E EA       +
Sbjct: 52  EAESHHLNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQIVEKEALEQKISLD 109

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H  HL IHG LHLLGYDH+D+ +A  MEGLE  I++ LG  DPY
Sbjct: 110 AHWAHLTIHGTLHLLGYDHIDEHEAEQMEGLESDIMQQLGFQDPY 154


>gi|268590391|ref|ZP_06124612.1| putative metalloprotease [Providencia rettgeri DSM 1131]
 gi|291314304|gb|EFE54757.1| putative metalloprotease [Providencia rettgeri DSM 1131]
          Length = 155

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA EN             E  F + ++ ++ K     + + E+++   D      L
Sbjct: 6   LDLQIACENPN-------GLPSEAEFQRWLAAVLPKF----QALSEVTIRVVDEQESHHL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAIDQQKTAEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  MEGLE  IL +LG  DPY
Sbjct: 113 VHGCLHLLGYDHIEDDEAEEMEGLETEILAELGYEDPY 150


>gi|323259260|gb|EGA42903.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
          Length = 146

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 6/136 (4%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E  F + +  +I +  F +E  V + LV  D      LN  YRG DKPTNVLSFP  F +
Sbjct: 10  EAQFQRWLDGVIPQ--FQEEAEVTIRLV--DEAESHDLNLTYRGKDKPTNVLSFP--FEA 63

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
             G    +LGD+++  +++E EA    K  E H  H+++HG LHLLGYDH+DD +A  ME
Sbjct: 64  PPGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEME 123

Query: 153 GLERSILEDLGINDPY 168
            LE  I+  +G  DPY
Sbjct: 124 SLETEIMLAMGYEDPY 139


>gi|237730636|ref|ZP_04561117.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906175|gb|EEH92093.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 155

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 90/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E     DE  L T  E  F   +  +I +  F +E+ V + LV  D      L
Sbjct: 6   LDLQLACE-----DESGLPT--ESQFQGWLDAVIPQ--FQEESEVTIRLV--DDAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DK TNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H++
Sbjct: 55  NLTYRGKDKSTNVLSFP--FEAPPGIEMSLLGDLIICRQVVEKEAQEQGKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYEDPY 150


>gi|157369460|ref|YP_001477449.1| hypothetical protein Spro_1217 [Serratia proteamaculans 568]
 gi|166977828|sp|A8GB31|RRMF_SERP5 RecName: Full=Probable rRNA maturation factor
 gi|157321224|gb|ABV40321.1| protein of unknown function UPF0054 [Serratia proteamaculans 568]
          Length = 157

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 88/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIA-VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A  +N+   DE   +   E V  +          F +E  V + LV  D      
Sbjct: 6   LDLQLACADNSGLPDEATFQRWLEGVLPQ----------FQEEAEVTIRLV--DEAESNE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG+DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H+
Sbjct: 54  LNLTYRGMDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEREAAEQDKALEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMESLETEIMHGLGYPDPY 150


>gi|114561894|ref|YP_749407.1| putative metalloprotease [Shewanella frigidimarina NCIMB 400]
 gi|122300720|sp|Q087J6|RRMF_SHEFN RecName: Full=Probable rRNA maturation factor
 gi|114333187|gb|ABI70569.1| protein of unknown function UPF0054 [Shewanella frigidimarina NCIMB
           400]
          Length = 156

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 94/169 (55%), Gaps = 15/169 (8%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           MS + ++L  LDLQIAV+N         R   +  F   V   I +     + +VEL++ 
Sbjct: 1   MSQQGISL-DLDLQIAVDNP--------RLPTQAEFETWVRAAIGQ----TKPVVELTIR 47

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D    + LN  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K
Sbjct: 48  IVDIAESQQLNSTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLVICAPVVEQEAIEQNK 105

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               H  H++IHG LHLLGYDH+ D++A  ME LE  ++E LG ++PY+
Sbjct: 106 PLIAHWAHMVIHGSLHLLGYDHIIDEEADEMESLETQLVEGLGFDNPYK 154


>gi|84394392|ref|ZP_00993111.1| hypothetical protein V12B01_09906 [Vibrio splendidus 12B01]
 gi|84374994|gb|EAP91922.1| hypothetical protein V12B01_09906 [Vibrio splendidus 12B01]
          Length = 153

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 87/159 (54%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIAVEN     E  L T       + +   + K     +   EL++   D+     
Sbjct: 4   ELDLQIAVEN-----EQGLPT------EQDIQLWLDKTIPQFQENAELTVRIVDTEESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F    G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEVPPGMELDLLGDLIICRQVVEKEAEEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQTMGFEDPY 149


>gi|83595101|ref|YP_428853.1| hypothetical protein Rru_A3772 [Rhodospirillum rubrum ATCC 11170]
 gi|123525364|sp|Q2RMS9|RRMF_RHORT RecName: Full=Probable rRNA maturation factor
 gi|83578015|gb|ABC24566.1| Protein of unknown function UPF0054 [Rhodospirillum rubrum ATCC
           11170]
          Length = 200

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 84/144 (58%), Gaps = 6/144 (4%)

Query: 30  TLCEVVFAKAVSNLISKGY-FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
            L E     AV+     GY       +E+SL+ TD   ++ LN +YRG DKPTNVLSF  
Sbjct: 45  ALVEQAVLAAVAAGDPSGYGLTPGTPLEISLLLTDDAAVQALNRDYRGQDKPTNVLSFAA 104

Query: 89  AFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
             A      DG   ++LGD+ LA E +  EA  LG    +H+ HL++HG LHLLGYDH +
Sbjct: 105 LDAEEPLPEDG-EPVLLGDVALARETVVREAADLGIAPADHVFHLVVHGVLHLLGYDHEE 163

Query: 145 DKDACVMEGLERSILEDLGINDPY 168
           +++A  MEGLE +IL   GI DPY
Sbjct: 164 EEEALDMEGLETAILGARGIADPY 187


>gi|229846922|ref|ZP_04467028.1| putative metalloprotease [Haemophilus influenzae 7P49H1]
 gi|229810006|gb|EEP45726.1| putative metalloprotease [Haemophilus influenzae 7P49H1]
          Length = 154

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A   +  +G     N VE+++   D      L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATGAVQPEG-----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAVEQDKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPY 150


>gi|319774955|ref|YP_004137443.1| hypothetical protein HICON_02870 [Haemophilus influenzae F3047]
 gi|329123148|ref|ZP_08251718.1| metal-dependent hydrolase [Haemophilus aegyptius ATCC 11116]
 gi|317449546|emb|CBY85750.1| conserved protein [Haemophilus influenzae F3047]
 gi|327471703|gb|EGF17145.1| metal-dependent hydrolase [Haemophilus aegyptius ATCC 11116]
          Length = 154

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN      I      E +   A   +  +G     N VE+++   D      L
Sbjct: 6   VDLQIATEN------IEGLPTEEQIVQWATVAIQPEG-----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY
Sbjct: 113 VHGCLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPY 150


>gi|271499715|ref|YP_003332740.1| hypothetical protein Dd586_1151 [Dickeya dadantii Ech586]
 gi|270343270|gb|ACZ76035.1| protein of unknown function UPF0054 [Dickeya dadantii Ech586]
          Length = 161

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA EN+            E  F + +  ++ +  F  E   E+++   D      L
Sbjct: 6   LDLQIASENSH-------GLPSEADFQRWLEAVLPQ--FQDE--AEVTIRVVDEEESHHL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA   GK  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAVEQGKSEEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 113 VHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPY 150


>gi|39933523|ref|NP_945799.1| hypothetical protein RPA0446 [Rhodopseudomonas palustris CGA009]
 gi|59799039|sp|Q6NCM6|RRMF_RHOPA RecName: Full=Probable rRNA maturation factor
 gi|39647369|emb|CAE25890.1| Protein of unknown function UPF0054 [Rhodopseudomonas palustris
           CGA009]
          Length = 190

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/116 (52%), Positives = 78/116 (67%), Gaps = 3/116 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA--SSDGCSSLMLGDIVLAYEIIE 112
            EL+++ TD   I  LN  +RG DKPTNVLSFP A      DG +  MLGDI +AY+ + 
Sbjct: 69  AELAVMLTDDDHIRQLNASFRGKDKPTNVLSFPAAQPEVQPDG-APRMLGDIAIAYQTVR 127

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA+  GK F++HL HL +HGFLHL+GYDH  +++A  ME  ER+IL  LGI DPY
Sbjct: 128 READDEGKPFDHHLSHLAVHGFLHLVGYDHETEEEAEEMEDAERAILARLGIPDPY 183


>gi|288942384|ref|YP_003444624.1| hypothetical protein Alvin_2683 [Allochromatium vinosum DSM 180]
 gi|288897756|gb|ADC63592.1| protein of unknown function UPF0054 [Allochromatium vinosum DSM
           180]
          Length = 178

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 89/164 (54%), Gaps = 14/164 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E+A    +  L    E     A++ +       +    EL++   D    + L
Sbjct: 7   LDLQVATEDA----DHPLPPRFERWVRAALAQVDPPFQRAR---AELTIRLVDPDESQAL 59

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYEIIEIEANVLGKEFENH 125
           N +YRG DKPTNVLSFP  F +  G  +      +LGD+V+  E++  EA   GK  E H
Sbjct: 60  NLQYRGRDKPTNVLSFP--FEAPPGLDADDPIHDLLGDLVICTEVVRREALEQGKTPEAH 117

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             H+++HG LHLL YDHV D +A VME LE +IL  LG   PYE
Sbjct: 118 WAHMVVHGVLHLLDYDHVTDAEAAVMETLETAILGGLGFPPPYE 161


>gi|251791997|ref|YP_003006717.1| putative metalloprotease [Aggregatibacter aphrophilus NJ8700]
 gi|247533384|gb|ACS96630.1| putative metalloprotease in flp 5' region [Aggregatibacter
           aphrophilus NJ8700]
          Length = 154

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E      E  L T      A+ +    +     + + VE+++   D      L
Sbjct: 6   IDLQIACEQ-----ETGLPT------AEQIEQWATVAVQPQTDEVEMTVRIVDEAESHAL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA   GK    H  H++
Sbjct: 55  NLNYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAQEQGKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMIGLGFVDPY 150


>gi|326796265|ref|YP_004314085.1| metalloprotease ybeY [Marinomonas mediterranea MMB-1]
 gi|326547029|gb|ADZ92249.1| metalloprotease ybeY [Marinomonas mediterranea MMB-1]
          Length = 155

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D    +TLN EYRG +KPTNVLSFP  F   DG    +LGD+V+  +++E EA
Sbjct: 41  EMTIRLVDEEESQTLNNEYRGKNKPTNVLSFP--FEVPDGVELPLLGDLVICRQVVEREA 98

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K+  +H  H+++HG LHL GYDH+ D +A  ME LE  IL  L I DPY
Sbjct: 99  RDQKKDLNHHWCHMVVHGILHLRGYDHIKDDEAEEMEALETQILATLNIPDPY 151


>gi|110681055|ref|YP_684062.1| hypothetical protein RD1_3919 [Roseobacter denitrificans OCh 114]
 gi|122972520|sp|Q161G7|RRMF_ROSDO RecName: Full=Probable rRNA maturation factor
 gi|109457171|gb|ABG33376.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 166

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 18/172 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+ I +E+  W   + L  L   V  +A+S+ ++    +     E+S +  D  RI  L
Sbjct: 1   MDIDILIEDDRWA-AMDLDVLVRDVL-RAISDTLT----LDLAAAEVSYLACDDARIALL 54

Query: 71  NFEYRGIDKPTNVLSFPTA------------FASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N ++R     TNVLS+P A              + D   +L LGD+ +AYE  E EA  L
Sbjct: 55  NADFREKATATNVLSWPAADLAPVVAGAVPTTPTVDVTGALTLGDVAIAYETCEREAADL 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GK    H+ HLI+HG LHLLGYDH+ D DA +M+G+E  IL  +G +DPY V
Sbjct: 115 GKPLAEHVTHLIVHGTLHLLGYDHIRDSDAALMQGVEAKILGKMGFDDPYMV 166


>gi|152979599|ref|YP_001345228.1| putative metalloprotease [Actinobacillus succinogenes 130Z]
 gi|171704389|sp|A6VQP6|RRMF_ACTSZ RecName: Full=Probable rRNA maturation factor
 gi|150841322|gb|ABR75293.1| protein of unknown function UPF0054 [Actinobacillus succinogenes
           130Z]
          Length = 156

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 2/116 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D      LN  YRG D+PTNVLSFP  F   +     +LGD+V+  +++E EA
Sbjct: 41  EITIRIVDEAESHDLNLTYRGKDRPTNVLSFP--FECPEEVELPLLGDLVICRQVVEREA 98

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              GK    H  H+++HG LHLLGYDH++D +A  ME LE  I+ +LG  DPY  D
Sbjct: 99  EQQGKPLPAHWAHMVVHGCLHLLGYDHIEDDEAVEMESLETQIMTELGFEDPYSYD 154


>gi|91228824|ref|ZP_01262731.1| hypothetical protein V12G01_00175 [Vibrio alginolyticus 12G01]
 gi|269965465|ref|ZP_06179584.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91187629|gb|EAS73954.1| hypothetical protein V12G01_00175 [Vibrio alginolyticus 12G01]
 gi|269829944|gb|EEZ84174.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 154

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNL-ISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQ+AVEN             E + ++    L + K   + +   E+++   D     
Sbjct: 4   ELDLQLAVENE------------EGLPSQQDFQLWLDKTIPLFQPQAEVTIRIVDEQESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  TLNHEYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEKEAVEQSKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPY 149


>gi|259415656|ref|ZP_05739577.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
 gi|259348886|gb|EEW60648.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
          Length = 170

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 91/168 (54%), Gaps = 18/168 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L + +E+A W D   L    EV  A  ++ L      + E+  E++++  D  RI  LN 
Sbjct: 3   LDVVIEDARW-DAAALNKQAEVAVAATLAYL----ELLDEDW-EVTVLGCDDARIADLNA 56

Query: 73  EYRGIDKPTNVLSFPT---AFASSDGCSS---------LMLGDIVLAYEIIEIEANVLGK 120
           E+R   KPTNVLS+P    A A   G  +           LGDI ++YE    EA +  K
Sbjct: 57  EFREKPKPTNVLSWPAQELAAAQEGGQPAPPEVDFMGDAALGDIAISYETCMKEAEIAQK 116

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             E+H+ HL++HG LHLLGYDH+ D DA VME LE  IL  LGI DPY
Sbjct: 117 PPEDHIRHLLVHGTLHLLGYDHIRDGDATVMETLEVGILGKLGIPDPY 164


>gi|114319557|ref|YP_741240.1| hypothetical protein Mlg_0396 [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312505|sp|Q0ABN7|RRMF_ALHEH RecName: Full=Probable rRNA maturation factor
 gi|114225951|gb|ABI55750.1| protein of unknown function UPF0054 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 166

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 79/141 (56%), Gaps = 6/141 (4%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E  F + VS  ++ G         L++   D      LN +YRG D PTNVLSFP  F +
Sbjct: 28  EAAFRRWVSAALAAGGHT--GPAALAVRVVDKAEGRRLNHDYRGRDYPTNVLSFP--FEA 83

Query: 93  SDGCSSLM--LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
             G    +  LGD+V+   ++E EA   GK   +H  HL++HG LHLLGYDH   ++A  
Sbjct: 84  PPGLDEPLPELGDLVICAPVVEREAREQGKPEADHWAHLVVHGVLHLLGYDHEAAEEAEA 143

Query: 151 MEGLERSILEDLGINDPYEVD 171
           MEGLER IL  LGI DPY +D
Sbjct: 144 MEGLERRILAGLGIADPYRLD 164


>gi|127513853|ref|YP_001095050.1| putative metalloprotease [Shewanella loihica PV-4]
 gi|171855250|sp|A3QH43|RRMF_SHELP RecName: Full=Probable rRNA maturation factor
 gi|126639148|gb|ABO24791.1| protein of unknown function UPF0054 [Shewanella loihica PV-4]
          Length = 157

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A +     +++  +   E     A+ N++ +         E+++   D    + L
Sbjct: 11  LDLQVATQ----AEQLPSQEEFESWVRLALGNVMPEA--------EMTIRLVDEAESQQL 58

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F S       +LGD+V+   ++E EA + GK    H  H++
Sbjct: 59  NHTYRGKDKPTNVLSFP--FESPPEVELPLLGDLVICVPVVEQEAEIQGKSLTAHWAHMV 116

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH+ D +A  ME LE  ++E LG  +PY+
Sbjct: 117 VHGCLHLLGYDHIIDSEAEEMESLETQLIESLGFPNPYK 155


>gi|262394982|ref|YP_003286836.1| putative metal-dependent hydrolase [Vibrio sp. Ex25]
 gi|262338576|gb|ACY52371.1| predicted metal-dependent hydrolase [Vibrio sp. Ex25]
          Length = 154

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNL-ISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQ+AVEN             E + ++    L + K   + +   E+++   D     
Sbjct: 4   ELDLQLAVENE------------EGLPSQQDFQLWLDKTIPLFQPQAEVTIRIVDEQESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  TLNHEYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEKEAIEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPY 149


>gi|170728027|ref|YP_001762053.1| putative metalloprotease [Shewanella woodyi ATCC 51908]
 gi|238688644|sp|B1KDV6|RRMF_SHEWM RecName: Full=Probable rRNA maturation factor
 gi|169813374|gb|ACA87958.1| protein of unknown function UPF0054 [Shewanella woodyi ATCC 51908]
          Length = 158

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA +N     ++  +   E+    A+ N +++         EL++   D+   + L
Sbjct: 12  LDLQIATDN----KQLPTQQDFELWVRTALRNTMTEA--------ELTVRVVDAEESQAL 59

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++   ++E EA    K  + H  H++
Sbjct: 60  NSTYRGKDKPTNVLSFP--FEAPAEIELPLLGDLIICASVVEHEAIQQNKPLQAHWAHMV 117

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D +A  ME +E  ++E LG N+PY+
Sbjct: 118 VHGCLHLLGYDHINDIEAEEMESIETQLIESLGFNNPYK 156


>gi|89069598|ref|ZP_01156937.1| hypothetical protein OG2516_13526 [Oceanicola granulosus HTCC2516]
 gi|89044796|gb|EAR50896.1| hypothetical protein OG2516_13526 [Oceanicola granulosus HTCC2516]
          Length = 163

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/125 (48%), Positives = 75/125 (60%), Gaps = 9/125 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLM-------LGD 103
           ++ E++L+  D  RI  LN ++RG   PTNVLS+P+    A   G + L        LGD
Sbjct: 37  DLYEVTLLGCDDARIAALNGDFRGKPAPTNVLSWPSEERGARIAGETPLPPEPTDPELGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           I +AYE    EA+  GK  E H  HLI+HG LHLLGYDH  D DA +MEGLE  IL  LG
Sbjct: 97  IAIAYETCAREASEAGKPLETHATHLIVHGTLHLLGYDHERDGDATLMEGLEVEILGKLG 156

Query: 164 INDPY 168
           + DPY
Sbjct: 157 LPDPY 161


>gi|254509288|ref|ZP_05121380.1| putative metalloprotease [Vibrio parahaemolyticus 16]
 gi|219547776|gb|EED24809.1| putative metalloprotease [Vibrio parahaemolyticus 16]
          Length = 154

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++   D      LN EYRG DKPTNVLSFP  F    G    +LGD+++  +++E E
Sbjct: 38  AELTIRIVDEEESHQLNHEYRGKDKPTNVLSFP--FEVPPGIEINLLGDLIICKQVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  H+++HG LHLLGYDH++D +A  ME LE  I++++G  DPY
Sbjct: 96  AQEQNKPLLAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFEDPY 149


>gi|91792174|ref|YP_561825.1| putative metalloprotease [Shewanella denitrificans OS217]
 gi|123061206|sp|Q12R24|RRMF_SHEDO RecName: Full=Probable rRNA maturation factor
 gi|91714176|gb|ABE54102.1| protein of unknown function UPF0054 [Shewanella denitrificans
           OS217]
          Length = 153

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIAV++     +    T         +            +  EL++   +    ++L
Sbjct: 7   LDLQIAVDSNQLPSQADFETWVRTALGNTL------------DTAELTIRLVEIAESQSL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+   ++E EA    K  + H  H++
Sbjct: 55  NHDYRGKDKPTNVLSFP--FEAPPGMELPLLGDLVICVAVVEQEALEQNKPLQAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           IHG LHLLGYDH+ D++A  ME LE  ++E LG ++PY+
Sbjct: 113 IHGCLHLLGYDHIIDQEAEEMESLETQLIEGLGFSNPYK 151


>gi|330445219|ref|ZP_08308871.1| conserved protein involved in translation [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489410|dbj|GAA03368.1| conserved protein involved in translation [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 154

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN EYRG D+PTNVLSFP  F +  G    +LGD+++  +++E E
Sbjct: 38  AEVTIRLVDEADSHELNLEYRGKDRPTNVLSFP--FEAPPGIELELLGDLIICRQVVEKE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K  + H  H+++HG LHLLGYDH++D +A  MEGLE  I++++G  DPY
Sbjct: 96  ALEQNKPLKAHWAHMVVHGSLHLLGYDHIEDDEAEEMEGLETEIMQNMGFVDPY 149


>gi|167625136|ref|YP_001675430.1| putative metalloprotease [Shewanella halifaxensis HAW-EB4]
 gi|189039845|sp|B0TR40|RRMF_SHEHH RecName: Full=Probable rRNA maturation factor
 gi|167355158|gb|ABZ77771.1| protein of unknown function UPF0054 [Shewanella halifaxensis
           HAW-EB4]
          Length = 156

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIAVE    G E+  +   E+    A+ + +S+         EL++   D    + L
Sbjct: 10  LDLQIAVE----GFELPSQAELELWVKTALRDTMSEA--------ELTIRIVDVEESQEL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+V+   +++ EA    K    H  H++
Sbjct: 58  NSTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLVICAAVVKQEAMDQNKPLIAHWAHMV 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH+DD +A  ME LE  ++E LG  +PY+
Sbjct: 116 VHGCLHLLGYDHIDDSEAEEMESLETHLIESLGYINPYK 154


>gi|269469147|gb|EEZ80692.1| hypothetical protein Sup05_0085 [uncultured SUP05 cluster
           bacterium]
          Length = 146

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 2/103 (1%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ LN  YR  D+PTNVLSFP+          ++LGDIV+   I+  EA +  K FE+HL
Sbjct: 46  IQNLNKTYRDKDQPTNVLSFPSDLPIE--IDEMILGDIVICTSIVANEAKLQNKTFEHHL 103

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +H+ IHG LHLLGYDHV+  DA  ME LE  ILE + IN+PYE
Sbjct: 104 IHMAIHGTLHLLGYDHVEPMDAQKMESLEIKILEKMQINNPYE 146


>gi|261822379|ref|YP_003260485.1| metalloprotease [Pectobacterium wasabiae WPP163]
 gi|261606392|gb|ACX88878.1| protein of unknown function UPF0054 [Pectobacterium wasabiae
           WPP163]
          Length = 159

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E A    E       E  F + +  ++ +     + + E+++   D      L
Sbjct: 6   LDLQIASEQAQGLPE-------EKDFQRWLEGVLPQF----QEVSEVTIRIVDEAESRDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEREAAEQEKTVEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 113 VHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYTDPY 150


>gi|188534466|ref|YP_001908263.1| Conserved hypothetical protein (UPF0054) [Erwinia tasmaniensis
           Et1/99]
 gi|238689711|sp|B2VBL6|RRMF_ERWT9 RecName: Full=Probable rRNA maturation factor
 gi|188029508|emb|CAO97385.1| Conserved hypothetical protein (UPF0054) [Erwinia tasmaniensis
           Et1/99]
          Length = 155

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN             E  F + +  ++ +  F  E+ V + LV  D      L
Sbjct: 6   LDLQLACEN-------EQGLPAETDFQRWLEAVLPQ--FQPESEVTIRLV--DEAESREL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H++
Sbjct: 55  NHTYRSKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAVEQGKTREAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 IHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYPDPY 150


>gi|240139954|ref|YP_002964431.1| putative metalloprotease [Methylobacterium extorquens AM1]
 gi|240009928|gb|ACS41154.1| putative metalloprotease [Methylobacterium extorquens AM1]
          Length = 161

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 4/159 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   I      E    +AV   ++         VE+S++  D   ++ LN
Sbjct: 5   EIDIAVEDARWEQAI---PELEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQALN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A   S    +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAAEQPSQPGLARPLGDVVLAYDTLVRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           HG LHLLG DH   + +A  ME LE + L  LG+ +PY+
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRALGVPNPYD 160


>gi|315634775|ref|ZP_07890057.1| metal-dependent hydrolase [Aggregatibacter segnis ATCC 33393]
 gi|315476327|gb|EFU67077.1| metal-dependent hydrolase [Aggregatibacter segnis ATCC 33393]
          Length = 154

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E      E  L T      A+ +    +     + + VE+++   D      L
Sbjct: 6   IDLQIACEQ-----ESGLPT------AEQIEQWATAAVQPQSDEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLNYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAQEQDKPVMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLEAQIMTGLGFADPY 150


>gi|254562379|ref|YP_003069474.1| metalloprotease [Methylobacterium extorquens DM4]
 gi|254269657|emb|CAX25629.1| putative metalloprotease [Methylobacterium extorquens DM4]
          Length = 161

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 4/159 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   I      E    +AV   ++         VE+S++  D   ++ LN
Sbjct: 5   EIDIAVEDARWEQAI---PELEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQELN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A   S    +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAAEQPSQPGVARPLGDVVLAYDTLVRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           HG LHLLG DH   + +A  ME LE + L  LG+ +PY+
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRALGVPNPYD 160


>gi|312882699|ref|ZP_07742436.1| putative metalloprotease [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369660|gb|EFP97175.1| putative metalloprotease [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 154

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIAVEN     +  L T  +++    + + ++K  F  +   E+++   D    + L
Sbjct: 5   LDLQIAVEN-----DKDLPTYEDILLW--LDSTLAK--FKPQ--AEVTVRVVDEPESQEL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K   +H  H++
Sbjct: 54  NHDYRGKDKPTNVLSFP--FEAPPGIDIDLLGDLVICKQVVEREAIEQNKPLISHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D++A  ME LE  I++ +G +DPY
Sbjct: 112 VHGCLHLLGYDHIEDQEAEEMESLETEIMKSMGYSDPY 149


>gi|120555651|ref|YP_960002.1| hypothetical protein Maqu_2740 [Marinobacter aquaeolei VT8]
 gi|145572774|sp|A1U496|RRMF_MARAV RecName: Full=Probable rRNA maturation factor
 gi|120325500|gb|ABM19815.1| protein of unknown function UPF0054 [Marinobacter aquaeolei VT8]
          Length = 157

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 15/161 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQ+A +    G  +  +TL E  +A+A         +  EN  E+++   D+     L
Sbjct: 6   VDLQMAFD----GTGVPSKTLFEA-WAEAA--------WQGENPTEVTIRIVDNDESREL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G +  + GD+V+   ++E EA    K+   H  H++
Sbjct: 53  NHQYRGKDKPTNVLSFP--FEAPAGITVPLAGDLVICAPVVEQEAREQNKDAVAHWAHMV 110

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHL GYDH++  +A VME LE  +L  LG  +PYE +
Sbjct: 111 VHGMLHLQGYDHIEVNEAEVMEALEIRLLAQLGFANPYEAE 151


>gi|85058787|ref|YP_454489.1| hypothetical protein SG0809 [Sodalis glossinidius str. 'morsitans']
 gi|123519813|sp|Q2NUU1|RRMF_SODGM RecName: Full=Probable rRNA maturation factor
 gi|84779307|dbj|BAE74084.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 156

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           +  E+++   D      LN  YRG D+PTNVLSFP  F +       +LGD+V+ ++++E
Sbjct: 37  DCAEVTVRLVDEAESHELNMTYRGKDRPTNVLSFP--FEAPPEVELPLLGDLVICHQVVE 94

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    K  E H  H+++HG LHLLGYDH+ D++A  ME LE  I++ LG  DPY
Sbjct: 95  REAQQQEKALEAHWAHMVVHGSLHLLGYDHIQDEEALEMESLETEIMQKLGYPDPY 150


>gi|307130058|ref|YP_003882074.1| hypothetical protein Dda3937_02469 [Dickeya dadantii 3937]
 gi|306527587|gb|ADM97517.1| conserved protein [Dickeya dadantii 3937]
          Length = 161

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA EN +    E   +   E V  +             + + E+++   D      
Sbjct: 6   LDLQIASENNSGLPSEADFQRWLEAVLPQF------------QEVAEVTIRVVDEEESHH 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  DKPTNVLSFP  F +       +LGD+++  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRCKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAVEQGKSAEEHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPY 150


>gi|163852621|ref|YP_001640664.1| hypothetical protein Mext_3206 [Methylobacterium extorquens PA1]
 gi|163664226|gb|ABY31593.1| protein of unknown function UPF0054 [Methylobacterium extorquens
           PA1]
          Length = 161

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 4/159 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   I      E    +AV   ++         VE+S++  D   ++ LN
Sbjct: 5   EIDIAVEDARWEQAI---PELEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQELN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A   S    +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAAEQPSQPGLARPLGDVVLAYDTLVRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           HG LHLLG DH   + +A  ME LE + L  LG+ +PY+
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRALGVPNPYD 160


>gi|229592785|ref|YP_002874904.1| putative metalloprotease [Pseudomonas fluorescens SBW25]
 gi|259647080|sp|C3K2K8|RRMF_PSEFS RecName: Full=Probable rRNA maturation factor
 gi|229364651|emb|CAY52573.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 164

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E A    E   R  C +   +  ++             EL++   D      L
Sbjct: 4   LDLQLATE-APAPSEAQFREWCALALRQRTAD------------SELTIRLVDEPEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  D  TNVLSFP A    +     +LGD+V+  E++E EA   GKE E H  HL+
Sbjct: 51  NHTWRQKDYATNVLSFP-ADVPDELLDIPLLGDLVICVEVVEREAKEQGKELEAHWAHLV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD +A  ME LE+++L +LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDDEAEEMETLEQTLLAELGHPDPYADD 150


>gi|260774883|ref|ZP_05883784.1| predicted metal-dependent hydrolase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609138|gb|EEX35296.1| predicted metal-dependent hydrolase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 156

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 19/162 (11%)

Query: 10  RLDLQIAVENALW---GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            LDLQ+AVE+       +++HL          AV+    +         E+++   D   
Sbjct: 4   ELDLQLAVEDEKGLPSSEDVHLW------LTSAVAKFQPQA--------EVTVRIVDEQE 49

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
              LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA+   K    H 
Sbjct: 50  SHQLNHDYRGKDKPTNVLSFP--FEAPPGIEMDLLGDLIICRQVVEQEADQQSKPLMAHW 107

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H+++HG LHLLGYDH++D +A  ME LE  I+  +G  DPY
Sbjct: 108 AHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMLGMGFEDPY 149


>gi|253687589|ref|YP_003016779.1| hypothetical protein PC1_1195 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259645749|sp|C6DBX6|RRMF_PECCP RecName: Full=Probable rRNA maturation factor
 gi|251754167|gb|ACT12243.1| protein of unknown function UPF0054 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 159

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E A    E       E  F + +  ++ +     + + E+++   D      L
Sbjct: 6   LDLQIASEQAQGLPE-------EKDFQRWLEGVLPQF----QEVSEVTIRIVDEAESRDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAAEQEKTVEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 113 VHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPY 150


>gi|114706888|ref|ZP_01439788.1| hypothetical protein FP2506_18769 [Fulvimarina pelagi HTCC2506]
 gi|114537836|gb|EAU40960.1| hypothetical protein FP2506_18769 [Fulvimarina pelagi HTCC2506]
          Length = 188

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 93/169 (55%), Gaps = 5/169 (2%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGY-FVKENIVELSLVF 61
           V +     + L ++VE+  W  E  L       F  A  + +++ + F K    ELS+  
Sbjct: 11  VPETGASWVSLALSVEDDRW--EAALGN--PEAFVTATLDAVARRFEFSKPFASELSVTL 66

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           +D   +  +N ++R  DKPTNVLSFP            +LGD++LAYE    EA    K 
Sbjct: 67  SDDETVREINGQWREKDKPTNVLSFPMVDLEPGERPGPLLGDLILAYETCAREAAGEAKP 126

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           F NH  HL++HGFLH LGYDH++D +A  ME LE SIL  LGI DPY+V
Sbjct: 127 FVNHARHLLVHGFLHCLGYDHIEDDEAEEMEALETSILAGLGIPDPYDV 175


>gi|149377494|ref|ZP_01895235.1| predicted metal-dependent hydrolase [Marinobacter algicola DG893]
 gi|149358186|gb|EDM46667.1| predicted metal-dependent hydrolase [Marinobacter algicola DG893]
          Length = 157

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 76/127 (59%), Gaps = 2/127 (1%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           ++  ++ EN  E+++    S     LN +YRG   PTNVLSFP  F +  G +  + GD+
Sbjct: 27  ARAAWLGENPSEVTIRIVASDESADLNSQYRGKSGPTNVLSFP--FEAPAGITVPLAGDL 84

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++   ++E EA    K  + H  H+++HG LHL GYDH++D DA VME LE  +L  LG 
Sbjct: 85  IICAPVVEKEATEQQKTLKEHWAHMVVHGMLHLQGYDHIEDNDAEVMEALEIRLLGQLGF 144

Query: 165 NDPYEVD 171
           ++PYE +
Sbjct: 145 SNPYETE 151


>gi|212636646|ref|YP_002313171.1| putative metalloprotease [Shewanella piezotolerans WP3]
 gi|226706243|sp|B8CSF8|RRMF_SHEPW RecName: Full=Probable rRNA maturation factor
 gi|212558130|gb|ACJ30584.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 156

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE    G E+      E+    A+ + + +         EL++   D    + 
Sbjct: 9   ELDLQVAVE----GVELPSVQEMELWVKTALRDSMDQA--------ELTIRIVDVAESQM 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+   +++ EA    K    H  H+
Sbjct: 57  LNSTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLVVCAAVVKQEAIDQNKPLNAHWAHM 114

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HG LHLLGYDH++D +A  ME LE  ++E LG N+PY+
Sbjct: 115 VVHGCLHLLGYDHIEDIEAEEMESLETQLIESLGYNNPYQ 154


>gi|188582642|ref|YP_001926087.1| hypothetical protein Mpop_3401 [Methylobacterium populi BJ001]
 gi|179346140|gb|ACB81552.1| protein of unknown function UPF0054 [Methylobacterium populi BJ001]
          Length = 161

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 4/159 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   +      E    +AV   ++         VE+S++  D   ++TLN
Sbjct: 5   EIDIAVEDARWEQAV---PDLEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQTLN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A        +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAADGPLQPGMARPLGDVVLAYDTLLRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           HG LHLLG DH   + +A  ME LE + L  LGI +PY+
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRTLGIPNPYD 160


>gi|323495443|ref|ZP_08100520.1| metal-binding heat shock protein [Vibrio brasiliensis LMG 20546]
 gi|323310366|gb|EGA63553.1| metal-binding heat shock protein [Vibrio brasiliensis LMG 20546]
          Length = 154

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 17/161 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTL--CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
            LDLQ+AVE+     E  L +L   ++  + AV+    +         E+++   D    
Sbjct: 4   ELDLQLAVES-----EDGLPSLEDIQLWLSSAVTKFQPQA--------EVTVRIVDEQES 50

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  
Sbjct: 51  HQLNHDYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEREAIEQNKPLMAHWA 108

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 109 HMVVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFEDPY 149


>gi|109898525|ref|YP_661780.1| hypothetical protein Patl_2208 [Pseudoalteromonas atlantica T6c]
 gi|123064566|sp|Q15TR2|RRMF_PSEA6 RecName: Full=Probable rRNA maturation factor
 gi|109700806|gb|ABG40726.1| protein of unknown function UPF0054 [Pseudoalteromonas atlantica
           T6c]
          Length = 152

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 75/114 (65%), Gaps = 2/114 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++   ++   + LN  YRG DKPTNVLSFP  F +  G S  +LGD+V+  +++  EA
Sbjct: 39  ELTVRIVETQESQELNLTYRGKDKPTNVLSFP--FEAPPGLSLNLLGDLVVCADVVAHEA 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +   K+  +H  H+I+HG LHLLG+DH++D +A  ME LE  IL+   I+DPY+
Sbjct: 97  DEQHKKLHHHWAHMIVHGALHLLGFDHINDDEAKEMEALEVDILKQFSIDDPYQ 150


>gi|323143880|ref|ZP_08078544.1| translation metalloprotein YbeY [Succinatimonas hippei YIT 12066]
 gi|322416352|gb|EFY07022.1| translation metalloprotein YbeY [Succinatimonas hippei YIT 12066]
          Length = 157

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 93/158 (58%), Gaps = 11/158 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQ+A++      +I   TL    +AK  S LI   Y  K++ + + +V +D   I+ L
Sbjct: 5   IDLQVAIDPKESLPDIDELTL----WAK--SALIGADYH-KDSEITVRIVASDE--IQEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N EYR  D PTN+LSFP  F   D     +LGD+++  EI+  EA V  K ++ H  HLI
Sbjct: 56  NREYRHKDCPTNILSFP--FECPDVIDLPLLGDLIICDEIVRREAKVQEKTYKEHFAHLI 113

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++ KDA  ME LE  I+  LG  DPY
Sbjct: 114 VHGCLHLLGYDHIEAKDAAKMEPLEVKIITKLGYPDPY 151


>gi|148555304|ref|YP_001262886.1| hypothetical protein Swit_2389 [Sphingomonas wittichii RW1]
 gi|166228577|sp|A5V8Y2|RRMF_SPHWW RecName: Full=Probable rRNA maturation factor
 gi|148500494|gb|ABQ68748.1| protein of unknown function UPF0054 [Sphingomonas wittichii RW1]
          Length = 169

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           W D      L       A+             + E+S+  TD   +  LN +YR  DKPT
Sbjct: 12  WADGTDWERLAIEAVTAAMRTTPHAAMLDAAYMAEVSIRLTDDDEVHALNRQYRQKDKPT 71

Query: 82  NVLSFPTAF--------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           NVLSFP            S DG   ++LGDI+LA  +   EA   G     H  HLI+HG
Sbjct: 72  NVLSFPMVQDDLIEGLDNSDDG--EVLLGDIILARGVCVREAAEKGVPTAEHATHLIVHG 129

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            LHLLGYDH++D +A  ME LER  L  LGI+DPY +
Sbjct: 130 TLHLLGYDHIEDDEAEAMEDLERVALATLGIDDPYAI 166


>gi|227327388|ref|ZP_03831412.1| putative metalloprotease [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 159

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E A    E       E  F + +  ++ +     + + E+++   D      L
Sbjct: 6   LDLQIASEQAQGLPE-------EKDFQRWLEGVLPQF----QEVSEVTIRIVDEAESRDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEREAAEQEKTVEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 113 VHGSLHLLGYDHIEDSEAEEMEALETEIMQGMGYADPY 150


>gi|157962956|ref|YP_001502990.1| putative metalloprotease [Shewanella pealeana ATCC 700345]
 gi|189039823|sp|A8H7B8|RRMF_SHEPA RecName: Full=Probable rRNA maturation factor
 gi|157847956|gb|ABV88455.1| protein of unknown function UPF0054 [Shewanella pealeana ATCC
           700345]
          Length = 156

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+Q+AVE    G E+  +   E+    A+ + +S+         EL++   D    + L
Sbjct: 10  LDVQVAVE----GFELPSQAELELWVKTALRDTMSEA--------ELTIRIVDVEESQEL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+V+   ++E EA    K    H  H++
Sbjct: 58  NMTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLVICAAVVEQEAIDQNKPLLAHWAHMV 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D +A  ME LE  ++E LG  +PY+
Sbjct: 116 VHGCLHLLGYDHIEDVEAEEMESLETQLIESLGYINPYK 154


>gi|148251672|ref|YP_001236257.1| hypothetical protein BBta_0048 [Bradyrhizobium sp. BTAi1]
 gi|172047308|sp|A5E857|RRMF_BRASB RecName: Full=Probable rRNA maturation factor
 gi|146403845|gb|ABQ32351.1| hypothetical protein BBta_0048 [Bradyrhizobium sp. BTAi1]
          Length = 169

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/117 (51%), Positives = 75/117 (64%), Gaps = 3/117 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEII 111
            E++++ TD   I TLN  +RGIDKPTNVLSFP         D  +  MLGDI +AYE +
Sbjct: 46  AEIAVMLTDDAGIRTLNSNWRGIDKPTNVLSFPALQPTGPRGDDDAPRMLGDIAIAYETM 105

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             EA+   K F++HL HL +HGFLHL+GYDH  D +A  ME LE  IL  LG+ DPY
Sbjct: 106 RREADEEQKPFDHHLSHLTVHGFLHLIGYDHESDAEAEEMEALETEILAHLGVPDPY 162


>gi|99080031|ref|YP_612185.1| hypothetical protein TM1040_0190 [Ruegeria sp. TM1040]
 gi|99036311|gb|ABF62923.1| protein of unknown function UPF0054 [Ruegeria sp. TM1040]
          Length = 194

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 18/171 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           R+ L + +E+A W D   L    +    +AVS  ++      E+  E++++  D  RI  
Sbjct: 24  RMILDVVIEDARW-DAAALEKQAQ----EAVSATLAYLELEDEDW-EVTVLGCDDARIAD 77

Query: 70  LNFEYRGIDKPTNVLSFPTA--FASSDGCSSL----------MLGDIVLAYEIIEIEANV 117
           LN E+R   KPTNVLS+P     A+ DG               LGDI ++Y+    EAN+
Sbjct: 78  LNAEFREKPKPTNVLSWPAQELAAAQDGGQPTPPEVDFMGDAALGDIAISYDTCVKEANL 137

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             K  E+H+ HL++HG LHLLGYDH+ D DA +ME LE  IL  LGI DPY
Sbjct: 138 AHKSREDHVRHLLVHGTLHLLGYDHIRDGDATIMETLEVGILGKLGIPDPY 188


>gi|190573586|ref|YP_001971431.1| putative metalloprotease [Stenotrophomonas maltophilia K279a]
 gi|229553943|sp|B2FJ87|RRMF_STRMK RecName: Full=Probable rRNA maturation factor
 gi|190011508|emb|CAQ45126.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 161

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D+   ++LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAIRVVDAKEGQSLNRHYRGKDYATNVLSFPAEVPEGLPKGVKFPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA+  GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL +LGI+DPY
Sbjct: 102 READEQGKALNAHYAHLTVHGVLHLLGWDHEDDKEAEAMEQLEREILAELGIDDPY 157


>gi|325920327|ref|ZP_08182264.1| hypothetical protein TIGR00043 [Xanthomonas gardneri ATCC 19865]
 gi|325549189|gb|EGD20106.1| hypothetical protein TIGR00043 [Xanthomonas gardneri ATCC 19865]
          Length = 166

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 47  ADLAVRIVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLPKGVKMPLLGDLVICAPVVA 106

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK   +H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY
Sbjct: 107 REAAEQGKSLASHYAHLTVHGTLHLLGWDHADDKEADAMEQLEREILADLGIDDPY 162


>gi|242238552|ref|YP_002986733.1| metalloprotease [Dickeya dadantii Ech703]
 gi|242130609|gb|ACS84911.1| protein of unknown function UPF0054 [Dickeya dadantii Ech703]
          Length = 161

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA  N             E  F + +  ++ +     + + E+++   D      L
Sbjct: 6   LDLQIACAN-------QDGLPAESTFQRWLEAVLPQF----QEVAEVTVRLVDEEESHHL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAAEQEKTTEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 113 VHGCLHLLGYDHIEDSEAEEMEALETEIMQGMGYADPY 150


>gi|270263721|ref|ZP_06191990.1| putative metalloprotease YbeY [Serratia odorifera 4Rx13]
 gi|270042605|gb|EFA15700.1| putative metalloprotease YbeY [Serratia odorifera 4Rx13]
          Length = 157

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 6/136 (4%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E  F + +  ++ +  F +E  V + LV  D      LN  YRG DKPTNVLSFP  F +
Sbjct: 21  EATFQRWLEGVLPQ--FQEEAEVTIRLV--DEAESNELNLTYRGKDKPTNVLSFP--FEA 74

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
             G    +LGD+++  +++E EA    K  E H  H+++HG LHLLGYDH++D +A  ME
Sbjct: 75  PPGIELPLLGDLIICRQVVEQEAVEQDKALEAHWAHMVVHGSLHLLGYDHIEDDEAEEME 134

Query: 153 GLERSILEDLGINDPY 168
            LE  I+  LG  DPY
Sbjct: 135 SLETEIMHGLGYPDPY 150


>gi|50120256|ref|YP_049423.1| putative metalloprotease [Pectobacterium atrosepticum SCRI1043]
 gi|59799108|sp|Q6D7K8|RRMF_ERWCT RecName: Full=Probable rRNA maturation factor
 gi|49610782|emb|CAG74227.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 159

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E A    E       E  F + +  ++ +     + + E+++   D      L
Sbjct: 6   LDLQIASEQAQGLPE-------EKDFQRWLEGVLPQF----QEVSEVTIRIVDEAESRDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEREAVEQEKTVEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 113 VHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPY 150


>gi|59711364|ref|YP_204140.1| putative metalloprotease [Vibrio fischeri ES114]
 gi|71658769|sp|Q5E6U4|RRMF_VIBF1 RecName: Full=Probable rRNA maturation factor
 gi|59479465|gb|AAW85252.1| conserved protein [Vibrio fischeri ES114]
          Length = 153

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 83/160 (51%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQIA EN      E  L T    V  +                 EL++   D     
Sbjct: 4   ELDLQIACENENGLPSEKELMTWLNAVIPQFQPQ------------AELTIRIVDEKESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  ELNHEYRGKDKPTNVLSFP--FEAPPGLELNLLGDLIICRQVVEEEAIEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D +A  ME LE  +++ +G  DPY
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETELMQGMGFEDPY 149


>gi|294676667|ref|YP_003577282.1| hypothetical protein RCAP_rcc01117 [Rhodobacter capsulatus SB 1003]
 gi|294475487|gb|ADE84875.1| protein of unknown function UPF0054 [Rhodobacter capsulatus SB
           1003]
          Length = 170

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 73/128 (57%), Gaps = 13/128 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLM-----------LG 102
           E+SL+  D  RI  LN E+RG   PTNVLS+P     A  DG                LG
Sbjct: 43  EISLIGCDDARIADLNAEFRGKPTPTNVLSWPAQDLAAEDDGEEPYFPEPFVPGERDSLG 102

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI ++Y+    EA   GK   +H+ HL+IHG LHLLGYDH+ D DA +ME +E  IL  L
Sbjct: 103 DIAISYQTCLREAEAAGKSVHDHVTHLVIHGVLHLLGYDHIRDADAQLMESIEVRILAAL 162

Query: 163 GINDPYEV 170
           GI +PYE+
Sbjct: 163 GIANPYEI 170


>gi|153835655|ref|ZP_01988322.1| conserved hypothetical protein [Vibrio harveyi HY01]
 gi|156973537|ref|YP_001444444.1| putative metalloprotease [Vibrio harveyi ATCC BAA-1116]
 gi|269961559|ref|ZP_06175921.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|166228922|sp|A7N1G7|RRMF_VIBHB RecName: Full=Probable rRNA maturation factor
 gi|148867723|gb|EDL66985.1| conserved hypothetical protein [Vibrio harveyi HY01]
 gi|156525131|gb|ABU70217.1| hypothetical protein VIBHAR_01228 [Vibrio harveyi ATCC BAA-1116]
 gi|269833600|gb|EEZ87697.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 154

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNL-ISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQ+AVEN             E + ++    L + K   + +   EL++   D     
Sbjct: 4   ELDLQLAVENE------------EGLPSEQDFQLWLDKTIPLFQPQAELTIRIVDEQESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F    G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  ELNHEYRGKDKPTNVLSFP--FEVPPGMEMDLLGDLIICRQVVEKEAVEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPY 149


>gi|94501474|ref|ZP_01307993.1| hypothetical protein RED65_05912 [Oceanobacter sp. RED65]
 gi|94426439|gb|EAT11428.1| hypothetical protein RED65_05912 [Oceanobacter sp. RED65]
          Length = 154

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 14/160 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+QIA+E    GD +   T  +     A+++L  +         ELS+   D+   ++L
Sbjct: 4   VDVQIAIE----GDNLPTPTQLQSWVTAALASLRPEA--------ELSIRLVDNSESQSL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N EYRG DKPTNVLSFP       ++  +  ++GD+V+ + ++  EA    K  E+H  H
Sbjct: 52  NHEYRGKDKPTNVLSFPFEIPPELAEIENFTLIGDLVICHPVVCQEAAEQKKPLEHHYAH 111

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++IHG LHLLGYDH+++ +A  ME LE  IL  L I DPY
Sbjct: 112 MVIHGCLHLLGYDHINEDEAEEMERLETDILATLNIPDPY 151


>gi|119944306|ref|YP_941986.1| hypothetical protein Ping_0533 [Psychromonas ingrahamii 37]
 gi|145558834|sp|A1SSC2|RRMF_PSYIN RecName: Full=Probable rRNA maturation factor
 gi|119862910|gb|ABM02387.1| hypothetical protein UPF0054 [Psychromonas ingrahamii 37]
          Length = 158

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 2/133 (1%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K +   I  G        EL++   D   I  LN +YR I K TNVL+FP  F +  G
Sbjct: 23  FEKWIEAAILGGSESHREEAELTVRIVDQDEIMQLNHQYRNISKTTNVLAFP--FQNPPG 80

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            +  +LGD+++  E++E EA + GK    H  H+ IH  LHLLGYDH++  +A  ME LE
Sbjct: 81  LTLPLLGDLIICKEVVESEAKLQGKSLTAHWAHMSIHSTLHLLGYDHIEQAEAVEMESLE 140

Query: 156 RSILEDLGINDPY 168
             +L +LG  DPY
Sbjct: 141 TKLLTELGFTDPY 153


>gi|254521495|ref|ZP_05133550.1| conserved hypothetical protein TIGR00043 [Stenotrophomonas sp.
           SKA14]
 gi|219719086|gb|EED37611.1| conserved hypothetical protein TIGR00043 [Stenotrophomonas sp.
           SKA14]
          Length = 156

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D+   ++LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 37  ADLAIRVVDAKEGQSLNRHYRGKDYATNVLSFPAELPEGLPKGVKFPLLGDLVICAPVVA 96

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA+  GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL +LGI DPY
Sbjct: 97  READEQGKALNAHYAHLTVHGVLHLLGWDHEDDKEAEAMEQLEREILAELGIADPY 152


>gi|70732739|ref|YP_262502.1| putative metalloprotease [Pseudomonas fluorescens Pf-5]
 gi|123652712|sp|Q4K5I1|RRMF_PSEF5 RecName: Full=Probable rRNA maturation factor
 gi|68347038|gb|AAY94644.1| conserved hypothetical protein TIGR00043 [Pseudomonas fluorescens
           Pf-5]
          Length = 152

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ A +     DE   R  CE+   +  ++             EL++   D      L
Sbjct: 4   LDLQRASQQPAPSDE-QFRQWCELALRQRTAD------------SELTIRLVDEAEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA   GKE + H  HL+
Sbjct: 51  NHTWRHKDYATNVLSFP-ADVPDELLDIPLLGDLVICIAVVEREAAEQGKELQAHWAHLV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD +A  ME LER++L +LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDDEAEEMEALERTLLAELGHPDPYADD 150


>gi|83949575|ref|ZP_00958308.1| hypothetical protein ISM_00735 [Roseovarius nubinhibens ISM]
 gi|83837474|gb|EAP76770.1| hypothetical protein ISM_00735 [Roseovarius nubinhibens ISM]
          Length = 166

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 10/125 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLM--------LGDIV 105
           E+SL+  D  RI  LN E+R   +PTNVLS+P+    A + G    +        LGDI 
Sbjct: 42  EISLLACDDARIAGLNEEFRDKPRPTNVLSWPSEERGAETPGARPDLPEPGFDPELGDIA 101

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +++E    EA   GK  E+H+ HLI+H  LHLLGYDH+ D+DA +ME  E  IL +LG++
Sbjct: 102 ISWETCAAEARAAGKPVEDHVTHLIVHAVLHLLGYDHIRDQDATLMEAEEVVILGNLGLD 161

Query: 166 DPYEV 170
           DPY V
Sbjct: 162 DPYSV 166


>gi|153840647|ref|ZP_01993314.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|260900743|ref|ZP_05909138.1| putative metalloprotease [Vibrio parahaemolyticus AQ4037]
 gi|149745688|gb|EDM56819.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|308108997|gb|EFO46537.1| putative metalloprotease [Vibrio parahaemolyticus AQ4037]
          Length = 154

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNL-ISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQ+AVEN             E + ++    L + K   + +   E+++   D     
Sbjct: 4   ELDLQLAVENE------------EGLPSQQDFQLWLDKTIPLFQPQAEVTIRIVDEKESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  ALNHEYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEKEAIEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPY 149


>gi|183598129|ref|ZP_02959622.1| hypothetical protein PROSTU_01494 [Providencia stuartii ATCC 25827]
 gi|188020288|gb|EDU58328.1| hypothetical protein PROSTU_01494 [Providencia stuartii ATCC 25827]
          Length = 155

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E      DE   +   E V  K          F  ++  E+++   D      
Sbjct: 6   LDLQLACEETTGLPDEALFQRWLEAVLPK----------FQPQS--EVTIRIVDEEESHH 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAIEQQKSAEEHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  IL +LG  DPY
Sbjct: 112 VVHGCLHLLGYDHIEDDEAEEMESLETEILAELGYADPY 150


>gi|166711740|ref|ZP_02242947.1| hypothetical protein Xoryp_09845 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 161

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN+ YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAVRVVDEKEGCSLNYHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY
Sbjct: 102 REAAEQGKSLAAHYAHLTVHGTLHLLGWDHDDDKEADAMEQLEREILADLGIDDPY 157


>gi|28897505|ref|NP_797110.1| putative metalloprotease [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363860|ref|ZP_05776612.1| putative metalloprotease [Vibrio parahaemolyticus K5030]
 gi|260878353|ref|ZP_05890708.1| putative metalloprotease [Vibrio parahaemolyticus AN-5034]
 gi|260898987|ref|ZP_05907428.1| putative metalloprotease [Vibrio parahaemolyticus Peru-466]
 gi|31077048|sp|Q87RP6|RRMF_VIBPA RecName: Full=Probable rRNA maturation factor
 gi|28805717|dbj|BAC58994.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308087470|gb|EFO37165.1| putative metalloprotease [Vibrio parahaemolyticus Peru-466]
 gi|308090264|gb|EFO39959.1| putative metalloprotease [Vibrio parahaemolyticus AN-5034]
 gi|308114631|gb|EFO52171.1| putative metalloprotease [Vibrio parahaemolyticus K5030]
 gi|328472486|gb|EGF43349.1| metal-binding heat shock protein [Vibrio parahaemolyticus 10329]
          Length = 154

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNL-ISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQ+AVEN             E + ++    L + K   + +   E+++   D     
Sbjct: 4   ELDLQLAVENE------------EGLPSQQDFQLWLDKTIPLFQPQAEVTIRIVDEKESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  ALNHEYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEKEAIEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPY 149


>gi|302185145|ref|ZP_07261818.1| putative metalloprotease [Pseudomonas syringae pv. syringae 642]
          Length = 166

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E +   DE   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQVASETSA-PDEAQFRLWCEM------------GLRQRSADSELTIRLVDESEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSVDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEADEMEALERTLLEELGYPDPYADD 150


>gi|261867460|ref|YP_003255382.1| putative metalloprotease [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|46577549|sp|Q9JRS8|RRMF_AGGAC RecName: Full=Probable rRNA maturation factor
 gi|8096199|dbj|BAA96100.1| unnamed protein product [Actinobacillus actinomycetemcomitans]
 gi|261412792|gb|ACX82163.1| putative metalloprotease in flp 5' region [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 154

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA       DE  L T      A  +    +     +   VE+++   D      L
Sbjct: 6   IDLQIAS-----ADESGLPT------AAQIEQWATAAVQPQSGEVEMTVRIVDETESHAL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           NF YRG D PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NFNYRGKDHPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAQEQEKPLIAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMMGLGFVDPY 150


>gi|301155988|emb|CBW15458.1| conserved protein [Haemophilus parainfluenzae T3T1]
          Length = 154

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+++   D      LN  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E E
Sbjct: 39  VEMTVRIVDEAESHDLNLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVERE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  H+I+HG LHLLGYDH+DD +A  ME LE  I++ LG  DPY
Sbjct: 97  AIEQEKPLMAHWAHMIVHGSLHLLGYDHIDDDEAEEMESLETEIMQGLGFADPY 150


>gi|90407493|ref|ZP_01215676.1| hypothetical protein PCNPT3_11282 [Psychromonas sp. CNPT3]
 gi|90311414|gb|EAS39516.1| hypothetical protein PCNPT3_11282 [Psychromonas sp. CNPT3]
          Length = 157

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 9/158 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA       DE  L +L   +    +   I KG  +     EL++   DS   + L
Sbjct: 5   IDLQIAT-----MDEKALPSLA--LIETWIKEAIIKGSSITREEAELTVRIVDSVESQQL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YR  DKPTNVLSFP  F +  G    +LGD+V+  +I+E EA    K+   H  H++
Sbjct: 58  NGQYRHKDKPTNVLSFP--FQAPMGIQLPLLGDLVICKQIVEQEALEQNKDLNAHWAHML 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLG+DH+ ++ A  ME LE  IL  LG   PY
Sbjct: 116 IHGSLHLLGFDHIIEQQALEMESLETKILVTLGFPPPY 153


>gi|145572763|sp|Q1GK93|RRMF_SILST RecName: Full=Probable rRNA maturation factor
          Length = 170

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 18/168 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L + +E+A W D   L    +    +AVS  ++      E+  E++++  D  RI  LN 
Sbjct: 3   LDVVIEDARW-DAAALEKQAQ----EAVSATLAYLELEDEDW-EVTVLGCDDARIADLNA 56

Query: 73  EYRGIDKPTNVLSFPTA--FASSDGCSSL----------MLGDIVLAYEIIEIEANVLGK 120
           E+R   KPTNVLS+P     A+ DG               LGDI ++Y+    EAN+  K
Sbjct: 57  EFREKPKPTNVLSWPAQELAAAQDGGQPTPPEVDFMGDAALGDIAISYDTCVKEANLAHK 116

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             E+H+ HL++HG LHLLGYDH+ D DA +ME LE  IL  LGI DPY
Sbjct: 117 SREDHVRHLLVHGTLHLLGYDHIRDGDATIMETLEVGILGKLGIPDPY 164


>gi|194365130|ref|YP_002027740.1| putative metalloprotease [Stenotrophomonas maltophilia R551-3]
 gi|238693470|sp|B4SQK2|RRMF_STRM5 RecName: Full=Probable rRNA maturation factor
 gi|194347934|gb|ACF51057.1| protein of unknown function UPF0054 [Stenotrophomonas maltophilia
           R551-3]
          Length = 161

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D+   ++LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAIRVVDAKEGQSLNRHYRGKDYATNVLSFPADVPEGLPKGVKFPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA+  GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL +LGI DPY
Sbjct: 102 READEQGKALNAHYAHLTVHGVLHLLGWDHEDDKEAEAMEQLEREILAELGIADPY 157


>gi|83854732|ref|ZP_00948262.1| hypothetical protein NAS141_08391 [Sulfitobacter sp. NAS-14.1]
 gi|83842575|gb|EAP81742.1| hypothetical protein NAS141_08391 [Sulfitobacter sp. NAS-14.1]
          Length = 174

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 90/171 (52%), Gaps = 18/171 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +  E+  W   + L TLC      A+++L      +  +  E++++  D   I TLN 
Sbjct: 4   LDVIEEDPRWAG-LDLDTLCPRAMRAALAHL-----SLDADTAEVTVLACDDAHIATLNA 57

Query: 73  EYRGIDKPTNVLSFPT--AFASSDG----------CSSLMLGDIVLAYEIIEIEANVLGK 120
           ++R    PTNVLS+P     A  DG           + L LGDI ++Y+    EA   G+
Sbjct: 58  DFRDKPTPTNVLSWPAEERGAVRDGELPLPVTPGFDNMLELGDIAISYDTCHAEAEAAGR 117

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +H+ HLI+HG LHLLGYDH  D DA +ME LE  IL  LG++DPY  D
Sbjct: 118 PMADHVTHLIVHGLLHLLGYDHERDGDATLMERLEVEILGKLGLDDPYRDD 168


>gi|218531462|ref|YP_002422278.1| hypothetical protein Mchl_3530 [Methylobacterium chloromethanicum
           CM4]
 gi|218523765|gb|ACK84350.1| protein of unknown function UPF0054 [Methylobacterium
           chloromethanicum CM4]
          Length = 161

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 4/159 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   I      E    +AV   ++         VE+S++  D   ++ LN
Sbjct: 5   EIDIAVEDARWEQAI---PELEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQALN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A        +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAAEQPFQPGVARPLGDVVLAYDTLVRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           HG LHLLG DH   + +A  ME LE + L  LG+ +PY+
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRALGVPNPYD 160


>gi|148244289|ref|YP_001218983.1| hypothetical protein COSY_0125 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166200323|sp|A5CXS1|RRMF_VESOH RecName: Full=Probable rRNA maturation factor
 gi|146326116|dbj|BAF61259.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 145

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/113 (48%), Positives = 70/113 (61%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL +   D   I+ LN  YR  D+PTNVLSFPT           +LGD+V+  +I+  E+
Sbjct: 35  ELLVRLVDEAEIQNLNKVYRYKDEPTNVLSFPTDLPIE--IDEKILGDVVICIQIVLKES 92

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K F NHL+H+ +HG LHLLGYDH+D KDA  M  LER IL  +GIN+PY
Sbjct: 93  IEQHKSFNNHLMHMAVHGTLHLLGYDHIDTKDAQNMANLERKILAKIGINNPY 145


>gi|83941255|ref|ZP_00953717.1| hypothetical protein EE36_03463 [Sulfitobacter sp. EE-36]
 gi|83847075|gb|EAP84950.1| hypothetical protein EE36_03463 [Sulfitobacter sp. EE-36]
          Length = 174

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 18/171 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +  E+  W   + L TLC       +++L      +  +  E++++  D   I TLN 
Sbjct: 4   LDVIEEDPRWAG-LDLDTLCPRAMRATLAHL-----SLDADTAEVTVLACDDAHIATLNA 57

Query: 73  EYRGIDKPTNVLSFPT--AFASSDG----------CSSLMLGDIVLAYEIIEIEANVLGK 120
           ++R    PTNVLS+P     A+ DG           + L LGDI ++Y+    EA   G+
Sbjct: 58  DFRDKPTPTNVLSWPAEERGAARDGELPLPVTPGFDNMLELGDIAISYDTCHAEAEAAGR 117

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +H+ HLI+HG LHLLGYDH  D DA +ME LE  IL  LG++DPY  D
Sbjct: 118 PMADHVTHLIVHGLLHLLGYDHERDGDATLMERLEVEILGKLGLDDPYRDD 168


>gi|37525277|ref|NP_928621.1| putative metalloprotease [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|46577360|sp|Q7N748|RRMF_PHOLL RecName: Full=Probable rRNA maturation factor
 gi|36784704|emb|CAE13604.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 155

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLC-EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA E        H + L  E +F   +  ++ +  F  E+  E+++   D      
Sbjct: 6   LDLQIACE--------HSQGLPKETLFQHWLDGVLPQ--FQSES--EVTIRIVDEAESHD 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG +KPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H+
Sbjct: 54  LNLTYRGKNKPTNVLSFP--FEAPPEIDLPLLGDLIICRQVVEKEAEEQQKTIEEHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I++ LG  DPY
Sbjct: 112 VVHGCLHLLGYDHIEDDEAEEMESLETEIMQKLGYADPY 150


>gi|227114978|ref|ZP_03828634.1| putative metalloprotease [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 159

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E      E       E  F + +  ++ +     + I E+++   D      L
Sbjct: 6   LDLQIASEQTQGLPE-------EKDFQRWLEGVLPQF----QEISEVTIRIVDEAESRDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E E+    K  E H  H++
Sbjct: 55  NNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVERESAEQEKTVEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 113 VHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPY 150


>gi|71280897|ref|YP_270242.1| hypothetical protein CPS_3574 [Colwellia psychrerythraea 34H]
 gi|123631588|sp|Q47Y78|RRMF_COLP3 RecName: Full=Probable rRNA maturation factor
 gi|71146637|gb|AAZ27110.1| conserved hypothetical protein TIGR00043 [Colwellia psychrerythraea
           34H]
          Length = 155

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 73/113 (64%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++   ++   + LN +YR  DKPTNVLSFP  F   DG    +LGD+++  E+++ EA
Sbjct: 42  ELTIRLVNNEESQQLNKQYRDKDKPTNVLSFP--FEVPDGIELNLLGDLIICIEVMKQEA 99

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K    H  HL+IHG LHL+G+DH+ D +A  ME +E +ILE LGI++PY
Sbjct: 100 QEQNKALFEHWAHLVIHGCLHLVGFDHISDTEALEMESIEITILEKLGISNPY 152


>gi|152996922|ref|YP_001341757.1| hypothetical protein Mmwyl1_2911 [Marinomonas sp. MWYL1]
 gi|189039860|sp|A6VZE3|RRMF_MARMS RecName: Full=Probable rRNA maturation factor
 gi|150837846|gb|ABR71822.1| protein of unknown function UPF0054 [Marinomonas sp. MWYL1]
          Length = 154

 Score =  104 bits (259), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 85/160 (53%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQIA E  A    E   R   E    KA+  +  +         E+++   D     
Sbjct: 5   ELDLQIATEETANLPSEADFRLWVE----KALPEVDEE--------FEVTIRIVDEEESH 52

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F +  G    +LGD+V+  +I+  EA    KE  +H  H
Sbjct: 53  ALNHEYRGKDKPTNVLSFP--FEAPPGLELPLLGDLVICAQIVAKEAAEQNKELFHHWAH 110

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           + IHG LHL GYDH++D +A  ME +E  +L  L I+DPY
Sbjct: 111 MTIHGILHLRGYDHINDDEADEMESIETELLASLSISDPY 150


>gi|289665628|ref|ZP_06487209.1| putative metalloprotease [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 161

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAKLPEGLPKGIKMPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY
Sbjct: 102 REAAEQGKSLAAHYAHLTVHGTLHLLGWDHEDDKEADAMEQLEREILADLGIDDPY 157


>gi|289671363|ref|ZP_06492438.1| putative metalloprotease [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 161

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAELPKGLPQGIKMPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY
Sbjct: 102 REAAEQGKSLAAHYAHLTVHGTLHLLGWDHEDDKEADAMEQLEREILADLGIDDPY 157


>gi|194439895|ref|ZP_03071958.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|253774357|ref|YP_003037188.1| metalloprotease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160738|ref|YP_003043846.1| putative metalloprotease [Escherichia coli B str. REL606]
 gi|300907838|ref|ZP_07125454.1| hypothetical protein HMPREF9536_05750 [Escherichia coli MS 84-1]
 gi|300931596|ref|ZP_07146908.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           187-1]
 gi|301302142|ref|ZP_07208275.1| hypothetical protein HMPREF9347_00710 [Escherichia coli MS 124-1]
 gi|194421189|gb|EDX37213.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|242376433|emb|CAQ31135.1| conserved protein involved in translation [Escherichia coli
           BL21(DE3)]
 gi|253325401|gb|ACT30003.1| protein of unknown function UPF0054 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972639|gb|ACT38310.1| hypothetical protein ECB_00627 [Escherichia coli B str. REL606]
 gi|253976833|gb|ACT42503.1| hypothetical protein ECD_00627 [Escherichia coli BL21(DE3)]
 gi|300400470|gb|EFJ84008.1| hypothetical protein HMPREF9536_05750 [Escherichia coli MS 84-1]
 gi|300460620|gb|EFK24113.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           187-1]
 gi|300842694|gb|EFK70454.1| hypothetical protein HMPREF9347_00710 [Escherichia coli MS 124-1]
 gi|315255034|gb|EFU35002.1| putative metalloprotease YbeY [Escherichia coli MS 85-1]
 gi|323963227|gb|EGB58795.1| hypothetical protein ERGG_00413 [Escherichia coli H489]
 gi|332342006|gb|AEE55340.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 155

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F KE+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQKES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|254427071|ref|ZP_05040778.1| conserved hypothetical protein TIGR00043, putative [Alcanivorax sp.
           DG881]
 gi|196193240|gb|EDX88199.1| conserved hypothetical protein TIGR00043, putative [Alcanivorax sp.
           DG881]
          Length = 175

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 88/168 (52%), Gaps = 13/168 (7%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           +  +  P +D+Q A +     DE HL   CE V   A    I+ G  V +    ++L   
Sbjct: 1   MNGIPTPTVDIQWASDAPDAPDEPHL---CEWVRHAA----IAAGGVVGD----ITLRIV 49

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           D   I TLN +YR  D  TNVLSFP        +G    +LGDI++   ++  EA+   K
Sbjct: 50  DEDEIRTLNRDYRDKDATTNVLSFPFDMPEGLPEGAVEPLLGDIIICDAVVCREASEQHK 109

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             + H  H++ HG LHLLGYDH+DD DA VME LE   L +LG  DPY
Sbjct: 110 PLDAHWAHMVTHGVLHLLGYDHIDDDDALVMETLEIRALGELGFPDPY 157


>gi|58582392|ref|YP_201408.1| putative metalloprotease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624266|ref|YP_451638.1| putative metalloprotease [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|62901406|sp|Q5GZ48|RRMF_XANOR RecName: Full=Probable rRNA maturation factor
 gi|123521734|sp|Q2P263|RRMF_XANOM RecName: Full=Probable rRNA maturation factor
 gi|58426986|gb|AAW76023.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368206|dbj|BAE69364.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 161

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAVRLVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY
Sbjct: 102 REAAEQGKSLAAHYAHLTVHGTLHLLGWDHDDDKEADAMEQLEREILADLGIDDPY 157


>gi|152985334|ref|YP_001346512.1| putative metalloprotease [Pseudomonas aeruginosa PA7]
 gi|150960492|gb|ABR82517.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 168

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 15/171 (8%)

Query: 2   SVKKVNLP-RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           + + V +P  LDLQ+A + A    E   R  CE+   +   +             EL++ 
Sbjct: 3   AARAVTMPLELDLQVASDAADLPSEAQFRAWCELALRQRAES-------------ELTIR 49

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D      LN  YR  D  TNVLSFP A    +     +LGD+V+   ++  EA    K
Sbjct: 50  LVDEAEGLELNSTYRHKDYATNVLSFP-ADVPEEFLDIPLLGDLVICAPVVAREAREQHK 108

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             + H  HL+IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 109 PLQAHWAHLVIHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 159


>gi|119470864|ref|ZP_01613475.1| hypothetical protein ATW7_05976 [Alteromonadales bacterium TW-7]
 gi|119446091|gb|EAW27370.1| hypothetical protein ATW7_05976 [Alteromonadales bacterium TW-7]
          Length = 152

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 89/168 (52%), Gaps = 32/168 (19%)

Query: 10  RLDLQIAVEN---------ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
            LDLQIA E          ALW D             KA+S    +         EL++V
Sbjct: 4   ELDLQIACEFDNLPSEAQFALWAD-------------KALSQYRDES--------ELTIV 42

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
            +D  + + LN +YRG +KPTNVLSF   F +  G    ++GD+V+   I+  EA    K
Sbjct: 43  ISDEAQSQQLNNDYRGKNKPTNVLSF--EFEAPPGIELPLVGDLVICPAIVLAEAVEQEK 100

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            F +H  H++IHG LHLLG+DH+  +DA  ME +E+ +L +L I DPY
Sbjct: 101 SFHDHFAHMVIHGCLHLLGFDHIKSEDALQMESIEKQLLAELNIADPY 148


>gi|293391337|ref|ZP_06635671.1| putative metalloprotease in flp 5' region [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951871|gb|EFE01990.1| putative metalloprotease in flp 5' region [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 154

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA       DE  L T      A  +    +     +   +E+++   D      L
Sbjct: 6   IDLQIAS-----ADESGLPT------AAQIEQWATAAVQPQSGEIEMTVRIVDETESHAL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLNYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAQEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMIGLGFVDPY 150


>gi|126730911|ref|ZP_01746720.1| hypothetical protein SSE37_13898 [Sagittula stellata E-37]
 gi|126708627|gb|EBA07684.1| hypothetical protein SSE37_13898 [Sagittula stellata E-37]
          Length = 178

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 80/141 (56%), Gaps = 19/141 (13%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCSSLML------ 101
           FV ++  E++++     RI  LN ++RG   PTNVLS+PT    S D      L      
Sbjct: 34  FVADD-YEIAVMGCSDGRIAILNADFRGRPAPTNVLSWPTQELTSPDAGGDPFLPHLDDD 92

Query: 102 ----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                     GD+ LA+E  E EA    K   +H+ HL++HG LHL+GYDH+ D DA +M
Sbjct: 93  FEAMGEPHHLGDLALAWETCEREAAEQDKSMADHVTHLLVHGVLHLMGYDHIRDADATLM 152

Query: 152 EGLERSILEDLGINDPY-EVD 171
           EGLER IL +LGI DPY E+D
Sbjct: 153 EGLERGILGNLGIADPYREID 173


>gi|21243197|ref|NP_642779.1| metalloprotease [Xanthomonas axonopodis pv. citri str. 306]
 gi|294624980|ref|ZP_06703631.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664274|ref|ZP_06729644.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|26006928|sp|Q8PJR6|RRMF_XANAC RecName: Full=Probable rRNA maturation factor
 gi|21108723|gb|AAM37315.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|292600702|gb|EFF44788.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605946|gb|EFF49227.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 161

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY
Sbjct: 102 REAAEQGKSLAAHYAHLTVHGTLHLLGWDHEDDKEAEAMEQLEREILADLGIDDPY 157


>gi|262274720|ref|ZP_06052531.1| predicted metal-dependent hydrolase [Grimontia hollisae CIP 101886]
 gi|262221283|gb|EEY72597.1| predicted metal-dependent hydrolase [Grimontia hollisae CIP 101886]
          Length = 154

 Score =  103 bits (257), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 94/161 (58%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA +N    D +   T  +  F +AV +   +         E+++   D    ++L
Sbjct: 5   VDLQIATQNT---DNLPTDTQFQQWFEQAVQSFREQA--------EVTIRLVDEEESQSL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K+   H  H++
Sbjct: 54  NRDYRGKDKPTNVLSFP--FDAPPGIELDLLGDLVICRQVVEKEAEEQNKDLFAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D++A  ME LE SI+  LG ++PY  D
Sbjct: 112 VHGSLHLLGYDHINDEEAEEMESLEISIMNALGFDNPYAAD 152


>gi|325578691|ref|ZP_08148767.1| metal-dependent hydrolase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159730|gb|EGC71861.1| metal-dependent hydrolase [Haemophilus parainfluenzae ATCC 33392]
          Length = 154

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+++   D      LN  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E E
Sbjct: 39  VEMTVRIVDKAESHDLNLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVERE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  H+I+HG LHLLGYDH++D +A  ME LE  I++ LG  DPY
Sbjct: 97  AIEQEKPLMAHWAHMIVHGSLHLLGYDHIEDDEAEEMESLETEIMQGLGFADPY 150


>gi|325914749|ref|ZP_08177087.1| hypothetical protein TIGR00043 [Xanthomonas vesicatoria ATCC 35937]
 gi|325539026|gb|EGD10684.1| hypothetical protein TIGR00043 [Xanthomonas vesicatoria ATCC 35937]
          Length = 161

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 66/116 (56%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI DPY
Sbjct: 102 REAAEQGKSLAAHYAHLTVHGTLHLLGWDHEDDKEADAMEQLEREILADLGIEDPY 157


>gi|254511649|ref|ZP_05123716.1| conserved hypothetical protein TIGR00043 [Rhodobacteraceae
           bacterium KLH11]
 gi|221535360|gb|EEE38348.1| conserved hypothetical protein TIGR00043 [Rhodobacteraceae
           bacterium KLH11]
          Length = 164

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 22/173 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYF-VKENIVELSLVFTDSHRIET 69
           ++L++ +E+  W          E +   A++ ++  GY  ++ ++ E+SL+  +  RI  
Sbjct: 1   MNLEVTLEDDRW-------QALEPLARHAIAEVL--GYCGLEADLCEISLLGCNDARIAI 51

Query: 70  LNFEYRGIDKPTNVLSFPT------------AFASSDGCSSLMLGDIVLAYEIIEIEANV 117
           LN E+R    PTNVLS+P                  D    + LGDI ++Y+    EA  
Sbjct: 52  LNAEFRETPTPTNVLSWPAEDLAADLPGDKPRQPKPDFTGEIALGDIAISYDTCAREAAE 111

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            GK    H+ HLI+HG LHLLGYDH+ D DA +ME +E  IL  LGI+DPY V
Sbjct: 112 AGKPMGAHVTHLIVHGALHLLGYDHIRDPDATLMEAVEVEILGKLGIDDPYNV 164


>gi|163747523|ref|ZP_02154873.1| hypothetical protein OIHEL45_01040 [Oceanibulbus indolifex HEL-45]
 gi|161379201|gb|EDQ03620.1| hypothetical protein OIHEL45_01040 [Oceanibulbus indolifex HEL-45]
          Length = 181

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 89/170 (52%), Gaps = 18/170 (10%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           D  I +E+  W + + L  L        + +L      +     E++L+  D  RI  LN
Sbjct: 14  DFDIVIEDDRW-EAVDLERLAHAAAQATLGHL-----GLDAETAEMTLLACDDARIAVLN 67

Query: 72  FEYRGIDKPTNVLSFPT--AFASSDGCSSLM----------LGDIVLAYEIIEIEANVLG 119
            ++RG  + TNVLS+P     A++ G   L           LGDI +AYE    EA+   
Sbjct: 68  EDFRGKARATNVLSWPAEERGAAAPGGDPLPVAPGIDGMLELGDIAMAYETCAAEASAAA 127

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           K    H+ HLI+HG LHLLGYDH +D DA +MEGLER IL  +G +DPY+
Sbjct: 128 KPLNAHVTHLIVHGLLHLLGYDHENDPDAMLMEGLEREILGKMGYDDPYK 177


>gi|82775936|ref|YP_402283.1| putative metalloprotease [Shigella dysenteriae Sd197]
 gi|309786321|ref|ZP_07680947.1| uncharacterized family UPF0054 family protein [Shigella dysenteriae
           1617]
 gi|123563234|sp|Q32IR3|RRMF_SHIDS RecName: Full=Probable rRNA maturation factor YbeY
 gi|81240084|gb|ABB60794.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308925715|gb|EFP71196.1| uncharacterized family UPF0054 family protein [Shigella dysenteriae
           1617]
          Length = 155

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E++++  D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTILVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|188576119|ref|YP_001913048.1| putative metalloprotease [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520571|gb|ACD58516.1| conserved hypothetical protein, putative [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 137

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 18  ADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVA 77

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY
Sbjct: 78  REAAEQGKSLAAHYAHLTVHGTLHLLGWDHDDDKEADAMEQLEREILADLGIDDPY 133


>gi|260767224|ref|ZP_05876165.1| predicted metal-dependent hydrolase [Vibrio furnissii CIP 102972]
 gi|260617732|gb|EEX42910.1| predicted metal-dependent hydrolase [Vibrio furnissii CIP 102972]
 gi|315180849|gb|ADT87763.1| hypothetical protein vfu_A02642 [Vibrio furnissii NCTC 11218]
          Length = 154

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN EYRG DK TNVLSFP  F +  G    +LGD+V+  +++E E
Sbjct: 38  AEVTIRIVDEPESHQLNLEYRGKDKSTNVLSFP--FEAPPGIEMDLLGDLVICRQVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 96  AVEQNKPLLAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMQTMGFEDPY 149


>gi|3639064|gb|AAC36473.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 140

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 77/136 (56%), Gaps = 6/136 (4%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E  F   +  +I +  F +E  V + LV  D      L   YRG DKPTNVLSFP  F +
Sbjct: 6   EAQFQTWLDGVIPQ--FQEEAEVTIRLV--DEAETPDLILTYRGKDKPTNVLSFP--FEA 59

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
             G    +LGD++++ +++E EA       E H  H+++HG LHLLGYDH+DD +A  ME
Sbjct: 60  PAGIEMPLLGDLIISRQVVEQEAQEQTNPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEME 119

Query: 153 GLERSILEDLGINDPY 168
            LE  I+  +G  DPY
Sbjct: 120 SLETEIMLAMGYEDPY 135


>gi|304310520|ref|YP_003810118.1| Protein of unknown function UPF0054 [gamma proteobacterium HdN1]
 gi|301796253|emb|CBL44461.1| Protein of unknown function UPF0054 [gamma proteobacterium HdN1]
          Length = 166

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/113 (48%), Positives = 67/113 (59%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL+L          LN EYRG D PTNVLSFP  F +  G S  +LGD+ +  EI+E EA
Sbjct: 50  ELTLRVVLPTESRELNREYRGKDAPTNVLSFP--FEAPPGISIPILGDLAICAEIVEQEA 107

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
              GK    H  H++IHG LHLLG+DH+ D +A  ME LE S+L    I DPY
Sbjct: 108 REQGKASNAHWAHMVIHGTLHLLGFDHIHDDEADAMEALEISLLAGFDITDPY 160


>gi|332532465|ref|ZP_08408343.1| A heat shock protein involved in translation, predicted protease
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038108|gb|EGI74555.1| A heat shock protein involved in translation, predicted protease
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 152

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 89/171 (52%), Gaps = 32/171 (18%)

Query: 10  RLDLQIAVEN---------ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
            LDLQIA E          ALW D             KA+S    +         ELS+V
Sbjct: 4   ELDLQIACEFDNLPSEEQFALWAD-------------KALSQYRDES--------ELSIV 42

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
            +D  + + LN +YRG +KPTNVLSF   F +  G    ++GD+++   I+  EA    K
Sbjct: 43  ISDEAQSQQLNNDYRGKNKPTNVLSF--EFEAPPGIDIPLVGDLIICPAIVLAEAIEQEK 100

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            F +H  H++IHG LHLLG+DH+   DA  ME +E+ +L +L I DPY  D
Sbjct: 101 SFHDHFAHMVIHGCLHLLGFDHIKSDDALEMESIEKQLLAELNIADPYRDD 151


>gi|315127053|ref|YP_004069056.1| hypothetical protein PSM_A1982 [Pseudoalteromonas sp. SM9913]
 gi|315015567|gb|ADT68905.1| hypothetical protein PSM_A1982 [Pseudoalteromonas sp. SM9913]
          Length = 152

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 2/116 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++V +D  + + LN +YRG +KPTNVLSF   F +  G    ++GD+++   I+  EA
Sbjct: 38  ELTIVISDEAQSQQLNNDYRGKNKPTNVLSF--EFEAPPGIDIPLVGDLIICPAIVLAEA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
               K F +H  H++IHG LHLLG+DH+  +DA  ME +E+ +L +L I DPY  D
Sbjct: 96  QEQEKSFHDHFAHMVIHGCLHLLGFDHIKSEDALEMESIEKQLLAELNIADPYRDD 151


>gi|310766986|gb|ADP11936.1| conserved uncharacterized protein YbeY [Erwinia sp. Ejp617]
          Length = 155

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 89/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A ++     E  L T  E  F + +  ++ +  F  E+ V + LV  D      L
Sbjct: 6   LDLQLACKS-----EQGLPT--EADFQRWLEAVLPQ--FQPESEVTIRLV--DEAESHQL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NHTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQEKVLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH+ D +A  ME LE  I+  LG  DPY
Sbjct: 113 IHGSLHLLGYDHIVDDEAEEMESLETEIMLALGYPDPY 150


>gi|319786434|ref|YP_004145909.1| hypothetical protein Psesu_0825 [Pseudoxanthomonas suwonensis 11-1]
 gi|317464946|gb|ADV26678.1| protein of unknown function UPF0054 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 163

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 2/140 (1%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           V  A++    ++     +    +L++   D+   + LN  YRG D  TNVLSFP      
Sbjct: 21  VPAAQSFRKWVAAALAGRIREADLAIRIVDAPEGQALNRHYRGKDYATNVLSFPAEMPEG 80

Query: 94  --DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
              G    +LGD+V+   ++  EA   GK    H  HL +HG LHLLG+DH DDK+A  M
Sbjct: 81  LPKGIKFPLLGDLVICAPVVAREAAEQGKPLAAHYAHLTVHGTLHLLGWDHEDDKEAEAM 140

Query: 152 EGLERSILEDLGINDPYEVD 171
           E LER IL  LG+ DPY  +
Sbjct: 141 EQLEREILAGLGLPDPYAAE 160


>gi|85374528|ref|YP_458590.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594]
 gi|122544125|sp|Q2N948|RRMF_ERYLH RecName: Full=Probable rRNA maturation factor
 gi|84787611|gb|ABC63793.1| predicted metal-dependent hydrolase [Erythrobacter litoralis
           HTCC2594]
          Length = 161

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/122 (49%), Positives = 70/122 (57%), Gaps = 10/122 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-------MLGDIVLA 107
           +E S++FT   ++  LN E+R  DKPTNVLSFP      D   +L       MLGDI LA
Sbjct: 38  LETSVLFTSDEQVHVLNREWRERDKPTNVLSFP--MLDRDRLRALEPEGPPEMLGDIALA 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGIND 166
           YE    EA   G   E H  HLI+HG LHL G+DHVD D  A  ME LE + L  LGI D
Sbjct: 96  YETCAREAEEKGISLEAHATHLIVHGLLHLAGHDHVDSDAQAEEMEALEIAALAKLGIAD 155

Query: 167 PY 168
           PY
Sbjct: 156 PY 157


>gi|310815236|ref|YP_003963200.1| Putative metalloprotease [Ketogulonicigenium vulgare Y25]
 gi|308753971|gb|ADO41900.1| Putative metalloprotease [Ketogulonicigenium vulgare Y25]
          Length = 165

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 10/124 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML----------GDI 104
           +E+SL+  +  RI  LN ++RG  KPTNVLS+P+    +     + +          GDI
Sbjct: 38  LEISLLACNDARIAELNADFRGKPKPTNVLSWPSEERGARTAGDMPMLPQAGDDPEIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +A+E    EA+  GK  + H+ HL++HG LHLLG+DH  D+DA +MEGLE  IL  +GI
Sbjct: 98  AIAFETCAREADEGGKALDVHVTHLLVHGCLHLLGFDHERDEDAALMEGLETEILGKMGI 157

Query: 165 NDPY 168
            DPY
Sbjct: 158 ADPY 161


>gi|21231768|ref|NP_637685.1| putative metalloprotease [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768106|ref|YP_242868.1| putative metalloprotease [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991236|ref|YP_001903246.1| putative metalloprotease [Xanthomonas campestris pv. campestris
           str. B100]
 gi|26006927|sp|Q8P8B2|RRMF_XANCP RecName: Full=Probable rRNA maturation factor
 gi|81305917|sp|Q4UVS5|RRMF_XANC8 RecName: Full=Probable rRNA maturation factor
 gi|229554360|sp|B0RRV9|RRMF_XANCB RecName: Full=Probable rRNA maturation factor
 gi|21113476|gb|AAM41609.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573438|gb|AAY48848.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732996|emb|CAP51194.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 161

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAEMPQGLPKGVKMPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL +LGI+DPY
Sbjct: 102 REAAEQGKSLSAHYAHLTVHGTLHLLGWDHEDDKEADAMEQLEREILAELGIDDPY 157


>gi|261253664|ref|ZP_05946237.1| predicted metal-dependent hydrolase [Vibrio orientalis CIP 102891]
 gi|260937055|gb|EEX93044.1| predicted metal-dependent hydrolase [Vibrio orientalis CIP 102891]
          Length = 110

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D      LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  
Sbjct: 2   DEKESHQLNHDYRGKDKPTNVLSFP--FEAPPGIEIDLLGDLIICRQVVEREAIEQNKPL 59

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             H  H+++HG LHLLGYDH++D +A  ME LE  I++ +G NDPY
Sbjct: 60  MAHWAHMVVHGSLHLLGYDHIEDDEAEKMESLETEIMQRMGFNDPY 105


>gi|285018848|ref|YP_003376559.1| hypothetical protein XALc_2084 [Xanthomonas albilineans GPE PC73]
 gi|283474066|emb|CBA16567.1| hypothetical protein XALc_2084 [Xanthomonas albilineans]
          Length = 161

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 66/116 (56%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D      LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAIRLVDQREGRALNQHYRGKDYATNVLSFPAELPDGLPKGIRLPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL +LG++DPY
Sbjct: 102 REAAEQGKPLNAHYAHLTVHGVLHLLGWDHEDDKEAEAMEQLERQILGELGLSDPY 157


>gi|329847362|ref|ZP_08262390.1| uncharacterized protein family UPF0054 family protein
           [Asticcacaulis biprosthecum C19]
 gi|328842425|gb|EGF91994.1| uncharacterized protein family UPF0054 family protein
           [Asticcacaulis biprosthecum C19]
          Length = 160

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 7/160 (4%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P +D++I  E   W D   L    +VV     + L +  +  + ++V   ++  D   ++
Sbjct: 3   PLIDIEI--EEDGWLDA--LPDAVDVVETAVTAALKAVNFTDQADVV---VLLCDDAEMK 55

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYR  DK TNVLSFP   +         LGD+ L  +    EA   GK  +NH++H
Sbjct: 56  RLNAEYRNKDKATNVLSFPAPKSMQIKGVLDHLGDMALGLQTCVREAREQGKTLKNHVLH 115

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L +HG LHLLGYDH+ D +A  ME LERSIL++LG+ DPY
Sbjct: 116 LSVHGTLHLLGYDHLHDAEAETMENLERSILKNLGVADPY 155


>gi|121997682|ref|YP_001002469.1| hypothetical protein Hhal_0891 [Halorhodospira halophila SL1]
 gi|145558843|sp|A1WVF5|RRMF_HALHL RecName: Full=Probable rRNA maturation factor
 gi|121589087|gb|ABM61667.1| protein of unknown function UPF0054 [Halorhodospira halophila SL1]
          Length = 154

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 1/115 (0%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-DGCSSLMLGDIVLAYEIIEIE 114
           EL++   D      LN +YRG DKPTNVLSFP          ++ +LGD+V+   ++  E
Sbjct: 38  ELTVRIVDEDESRALNRDYRGRDKPTNVLSFPCELPPGLPAEAAQILGDLVVCAPVVARE 97

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           A   GK   +H  H+++HG LHLLGYDH D   A  ME  ER IL  LG+ DPY+
Sbjct: 98  AAEQGKPEADHWAHMLVHGALHLLGYDHEDPAQAERMEAEERRILAALGVPDPYQ 152


>gi|187730605|ref|YP_001879332.1| putative metalloprotease [Shigella boydii CDC 3083-94]
 gi|238691682|sp|B2TU61|RRMF_SHIB3 RecName: Full=Probable rRNA maturation factor YbeY
 gi|187427597|gb|ACD06871.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
          Length = 155

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETKIMLALGYEDPY 150


>gi|84515223|ref|ZP_01002585.1| hypothetical protein SKA53_01156 [Loktanella vestfoldensis SKA53]
 gi|84510506|gb|EAQ06961.1| hypothetical protein SKA53_01156 [Loktanella vestfoldensis SKA53]
          Length = 164

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 10/145 (6%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----A 89
             A+  S+ +     ++ ++ E++++  D  RI  LN ++RG   PTNVLS+P+     A
Sbjct: 19  ALAQQASDAVFDRLGLEPSVFEIAVLACDDARIAALNADFRGKPAPTNVLSWPSDERAPA 78

Query: 90  FA-----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
            A       D      LGDI +AY+    EA   G +F +H +HL++HG LHLLG+DH  
Sbjct: 79  VAGEMPLPPDPVMDTELGDIAIAYDTCLREAEAAGSQFIHHCLHLLVHGTLHLLGFDHER 138

Query: 145 DKDACVMEGLERSILEDLGINDPYE 169
           D DA +MEGLE  IL  +G+++PY 
Sbjct: 139 DLDATLMEGLEVEILGKMGVDNPYR 163


>gi|300927234|ref|ZP_07142966.1| hypothetical protein HMPREF9548_05209 [Escherichia coli MS 182-1]
 gi|301329191|ref|ZP_07222182.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 78-1]
 gi|300416800|gb|EFK00111.1| hypothetical protein HMPREF9548_05209 [Escherichia coli MS 182-1]
 gi|300844479|gb|EFK72239.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 78-1]
          Length = 155

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A EN +   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACENNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|85709121|ref|ZP_01040187.1| predicted metal-dependent hydrolase [Erythrobacter sp. NAP1]
 gi|85690655|gb|EAQ30658.1| predicted metal-dependent hydrolase [Erythrobacter sp. NAP1]
          Length = 161

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 6/118 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-----SDGCSSLMLGDIVLAYEII 111
           +S++FT    + TLN E+R  DKPTNVLSFP    +      +     MLGDI LAYE  
Sbjct: 40  VSILFTSDGEVHTLNREWRQRDKPTNVLSFPMMERAELLELGEEGPPAMLGDIALAYETC 99

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
             EA       ++H  HLI+HG LHL G+DHV  +++A VME LERS L ++GI DPY
Sbjct: 100 AREAAEKNIPLDHHAAHLIVHGLLHLAGHDHVHCEEEAQVMEDLERSALANMGIADPY 157


>gi|77359990|ref|YP_339565.1| hypothetical protein PSHAa1044 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|123589178|sp|Q3IK77|RRMF_PSEHT RecName: Full=Probable rRNA maturation factor
 gi|76874901|emb|CAI86122.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 152

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 89/168 (52%), Gaps = 32/168 (19%)

Query: 10  RLDLQIAVEN---------ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
            LDLQIA E          ALW D             KA+S    +         EL++V
Sbjct: 4   ELDLQIACEFDNLPSEAQFALWAD-------------KALSQYRDES--------ELTIV 42

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
            +D  + + LN +YRG +KPTNVLSF   F +  G    ++GD+V+   I+  EA    K
Sbjct: 43  ISDEAQSQQLNNDYRGKNKPTNVLSF--EFEAPPGIDIPLVGDLVICPAIVLAEAIEQEK 100

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            F +H  H++IHG LHLLG+DH+  +DA  ME +E+ +L +L I DPY
Sbjct: 101 SFHDHFAHMVIHGCLHLLGFDHIKSEDAFEMESIEKQLLAELNIADPY 148


>gi|117924738|ref|YP_865355.1| hypothetical protein Mmc1_1438 [Magnetococcus sp. MC-1]
 gi|145572756|sp|A0L7K6|RRMF_MAGSM RecName: Full=Probable rRNA maturation factor
 gi|117608494|gb|ABK43949.1| protein of unknown function UPF0054 [Magnetococcus sp. MC-1]
          Length = 147

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 8/122 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-------SLMLGDIVLA 107
           +E+S++ +D   ++ LN +YRG DKPTN+LSF     + D            +LGD++LA
Sbjct: 25  LEVSVLLSDDEAVQALNAQYRGKDKPTNILSFAMEEEADDAMPMPIMAGEPRLLGDLILA 84

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD-ACVMEGLERSILEDLGIND 166
           Y+ ++ EA    K F+ HL HL++HG LHLLGYDH   +D A   E  E +IL  LG+ +
Sbjct: 85  YQTVQREAAEQDKPFDQHLTHLLVHGTLHLLGYDHERSEDEAQQQEAREIAILAQLGLPN 144

Query: 167 PY 168
           PY
Sbjct: 145 PY 146


>gi|83313564|ref|YP_423828.1| metal-dependent hydrolase [Magnetospirillum magneticum AMB-1]
 gi|123540295|sp|Q2VYQ6|RRMF_MAGSA RecName: Full=Probable rRNA maturation factor
 gi|82948405|dbj|BAE53269.1| Predicted metal-dependent hydrolase [Magnetospirillum magneticum
           AMB-1]
          Length = 164

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 5/123 (4%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC----SSLMLGDIV 105
           + + +VELS+V  D   ++ LN ++RG D+PTNVLSF  +    D      + L+LGD++
Sbjct: 40  LPDGVVELSIVLADDATVQGLNRDWRGKDQPTNVLSF-ASLDDEDAPVVPGAPLLLGDVI 98

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LA+E    EA+  GK   +H  HL++HG LHLLGYDH+DD++A  ME LE ++L  LGI+
Sbjct: 99  LAFETCAAEAHDQGKTLADHFSHLVVHGVLHLLGYDHMDDEEAAEMEALETTLLAALGID 158

Query: 166 DPY 168
           DPY
Sbjct: 159 DPY 161


>gi|149914113|ref|ZP_01902645.1| S-adenosylmethionine synthetase [Roseobacter sp. AzwK-3b]
 gi|149812397|gb|EDM72228.1| S-adenosylmethionine synthetase [Roseobacter sp. AzwK-3b]
          Length = 165

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 18/156 (11%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L  L E     A+++L      +  +  E++++  D  RI  LN ++R    PTNVLS
Sbjct: 15  LDLPGLAETAARAALTHL-----GLAPDAWEIAILACDDARIAALNADFRDKPVPTNVLS 69

Query: 86  FPT-------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +P              A A +   +   LGDI +A++  + EA   GK   +H+ HLI+H
Sbjct: 70  WPETDLAPDTPGARPEAPAQAGDDAPTPLGDIAIAWDTCQREAEAAGKPLPDHVTHLIVH 129

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             LHLLGYDH+ D+DA +ME  E +IL  LG+ DPY
Sbjct: 130 AVLHLLGYDHIRDQDATLMETTEVAILGKLGVPDPY 165


>gi|16128642|ref|NP_415192.1| metal-binding heat shock protein required for rRNA maturation
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24112043|ref|NP_706553.1| putative metalloprotease [Shigella flexneri 2a str. 301]
 gi|30062154|ref|NP_836325.1| putative metalloprotease [Shigella flexneri 2a str. 2457T]
 gi|74311195|ref|YP_309614.1| putative metalloprotease [Shigella sonnei Ss046]
 gi|82543103|ref|YP_407050.1| metalloprotease [Shigella boydii Sb227]
 gi|89107528|ref|AP_001308.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|91209702|ref|YP_539688.1| putative metalloprotease [Escherichia coli UTI89]
 gi|110804693|ref|YP_688213.1| putative metalloprotease [Shigella flexneri 5 str. 8401]
 gi|157156781|ref|YP_001461830.1| putative metalloprotease [Escherichia coli E24377A]
 gi|157160147|ref|YP_001457465.1| putative metalloprotease [Escherichia coli HS]
 gi|170020984|ref|YP_001725938.1| putative metalloprotease [Escherichia coli ATCC 8739]
 gi|170080339|ref|YP_001729659.1| hypothetical protein ECDH10B_0728 [Escherichia coli str. K-12
           substr. DH10B]
 gi|188492875|ref|ZP_03000145.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|191168675|ref|ZP_03030455.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|193063449|ref|ZP_03044539.1| conserved hypothetical protein [Escherichia coli E22]
 gi|193069038|ref|ZP_03049996.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194429738|ref|ZP_03062254.1| conserved hypothetical protein [Escherichia coli B171]
 gi|209917921|ref|YP_002292005.1| putative metalloprotease [Escherichia coli SE11]
 gi|218549764|ref|YP_002383555.1| metalloprotease [Escherichia fergusonii ATCC 35469]
 gi|218553201|ref|YP_002386114.1| putative metalloprotease [Escherichia coli IAI1]
 gi|218557590|ref|YP_002390503.1| metalloprotease [Escherichia coli S88]
 gi|218694098|ref|YP_002401765.1| putative metalloprotease [Escherichia coli 55989]
 gi|237707372|ref|ZP_04537853.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238899936|ref|YP_002925732.1| hypothetical protein BWG_0530 [Escherichia coli BW2952]
 gi|256020611|ref|ZP_05434476.1| putative metalloprotease [Shigella sp. D9]
 gi|256023730|ref|ZP_05437595.1| putative metalloprotease [Escherichia sp. 4_1_40B]
 gi|260842885|ref|YP_003220663.1| hypothetical protein ECO103_0666 [Escherichia coli O103:H2 str.
           12009]
 gi|260853910|ref|YP_003227801.1| hypothetical protein ECO26_0734 [Escherichia coli O26:H11 str.
           11368]
 gi|260866807|ref|YP_003233209.1| hypothetical protein ECO111_0689 [Escherichia coli O111:H- str.
           11128]
 gi|291281608|ref|YP_003498426.1| hypothetical protein G2583_0822 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293413953|ref|ZP_06656602.1| metalloprotease ybeY [Escherichia coli B185]
 gi|293418772|ref|ZP_06661207.1| metalloprotease ybeY [Escherichia coli B088]
 gi|300817820|ref|ZP_07098034.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           107-1]
 gi|300823023|ref|ZP_07103157.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           119-7]
 gi|300937872|ref|ZP_07152665.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 21-1]
 gi|300951161|ref|ZP_07165024.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           116-1]
 gi|300959235|ref|ZP_07171310.1| hypothetical protein HMPREF9547_04899 [Escherichia coli MS 175-1]
 gi|301028857|ref|ZP_07192033.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           196-1]
 gi|301643925|ref|ZP_07243952.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           146-1]
 gi|307137275|ref|ZP_07496631.1| putative metalloprotease [Escherichia coli H736]
 gi|307312624|ref|ZP_07592256.1| protein of unknown function UPF0054 [Escherichia coli W]
 gi|309795472|ref|ZP_07689889.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           145-7]
 gi|312970736|ref|ZP_07784917.1| uncharacterized family UPF0054 family protein [Escherichia coli
           1827-70]
 gi|331641162|ref|ZP_08342297.1| putative metalloprotease YbeY [Escherichia coli H736]
 gi|331651672|ref|ZP_08352691.1| putative metalloprotease YbeY [Escherichia coli M718]
 gi|331667014|ref|ZP_08367888.1| putative metalloprotease YbeY [Escherichia coli TA271]
 gi|331672192|ref|ZP_08372984.1| putative metalloprotease YbeY [Escherichia coli TA280]
 gi|331676321|ref|ZP_08377033.1| putative metalloprotease YbeY [Escherichia coli H591]
 gi|332281801|ref|ZP_08394214.1| conserved hypothetical protein [Shigella sp. D9]
 gi|62906654|sp|P0A898|RRMF_ECOLI RecName: Full=Probable rRNA maturation factor YbeY
 gi|62906655|sp|P0A899|RRMF_SHIFL RecName: Full=Probable rRNA maturation factor YbeY
 gi|122424610|sp|Q1REQ7|RRMF_ECOUT RecName: Full=Probable rRNA maturation factor YbeY
 gi|122957569|sp|Q0T6R8|RRMF_SHIF8 RecName: Full=Probable rRNA maturation factor YbeY
 gi|123560316|sp|Q324N6|RRMF_SHIBS RecName: Full=Probable rRNA maturation factor YbeY
 gi|123617771|sp|Q3Z4D3|RRMF_SHISS RecName: Full=Probable rRNA maturation factor YbeY
 gi|166919068|sp|A7ZJ51|RRMF_ECO24 RecName: Full=Probable rRNA maturation factor YbeY
 gi|166919069|sp|A7ZXS8|RRMF_ECOHS RecName: Full=Probable rRNA maturation factor YbeY
 gi|189041073|sp|B1IYE9|RRMF_ECOLC RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704001|sp|B6HYM8|RRMF_ECOSE RecName: Full=Probable rRNA maturation factor YbeY
 gi|226710475|sp|B7MFS5|RRMF_ECO45 RecName: Full=Probable rRNA maturation factor YbeY
 gi|226710477|sp|B7M5I6|RRMF_ECO8A RecName: Full=Probable rRNA maturation factor YbeY
 gi|226710480|sp|B7LKU5|RRMF_ESCF3 RecName: Full=Probable rRNA maturation factor YbeY
 gi|229485211|sp|B1X654|RRMF_ECODH RecName: Full=Probable rRNA maturation factor YbeY
 gi|254807365|sp|B7L9K6|RRMF_ECO55 RecName: Full=Probable rRNA maturation factor YbeY
 gi|259710207|sp|C4ZWE6|RRMF_ECOBW RecName: Full=Probable rRNA maturation factor YbeY
 gi|56554600|pdb|1XM5|A Chain A, Crystal Structure Of Metal-Dependent Hydrolase Ybey From
           E. Coli, Pfam Upf0054
 gi|56554601|pdb|1XM5|B Chain B, Crystal Structure Of Metal-Dependent Hydrolase Ybey From
           E. Coli, Pfam Upf0054
 gi|56554602|pdb|1XM5|C Chain C, Crystal Structure Of Metal-Dependent Hydrolase Ybey From
           E. Coli, Pfam Upf0054
 gi|56554603|pdb|1XM5|D Chain D, Crystal Structure Of Metal-Dependent Hydrolase Ybey From
           E. Coli, Pfam Upf0054
 gi|1778578|gb|AAB40861.1| HI0004 homolog [Escherichia coli]
 gi|1786880|gb|AAC73760.1| metal-binding heat shock protein required for rRNA maturation
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062278|dbj|BAA35314.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|24050866|gb|AAN42260.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040399|gb|AAP16131.1| hypothetical protein S0645 [Shigella flexneri 2a str. 2457T]
 gi|73854672|gb|AAZ87379.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81244514|gb|ABB65222.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|91071276|gb|ABE06157.1| hypothetical protein UTI89_C0657 [Escherichia coli UTI89]
 gi|110614241|gb|ABF02908.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|157065827|gb|ABV05082.1| conserved hypothetical protein [Escherichia coli HS]
 gi|157078811|gb|ABV18519.1| conserved hypothetical protein [Escherichia coli E24377A]
 gi|169755912|gb|ACA78611.1| protein of unknown function UPF0054 [Escherichia coli ATCC 8739]
 gi|169888174|gb|ACB01881.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188488074|gb|EDU63177.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|190901267|gb|EDV61036.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|192931033|gb|EDV83637.1| conserved hypothetical protein [Escherichia coli E22]
 gi|192957582|gb|EDV88027.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194412219|gb|EDX28525.1| conserved hypothetical protein [Escherichia coli B171]
 gi|209776878|gb|ACI86751.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|209776884|gb|ACI86754.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|209911180|dbj|BAG76254.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218350830|emb|CAU96526.1| putative metal-dependent hydrolase [Escherichia coli 55989]
 gi|218357305|emb|CAQ89940.1| putative metal-dependent hydrolase [Escherichia fergusonii ATCC
           35469]
 gi|218359969|emb|CAQ97513.1| putative metal-dependent hydrolase [Escherichia coli IAI1]
 gi|218364359|emb|CAR02034.1| putative metal-dependent hydrolase [Escherichia coli S88]
 gi|226898582|gb|EEH84841.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238860283|gb|ACR62281.1| conserved protein [Escherichia coli BW2952]
 gi|257752559|dbj|BAI24061.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257758032|dbj|BAI29529.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257763163|dbj|BAI34658.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|260450174|gb|ACX40596.1| protein of unknown function UPF0054 [Escherichia coli DH1]
 gi|281600007|gb|ADA72991.1| putative metal-dependent hydrolase [Shigella flexneri 2002017]
 gi|284920459|emb|CBG33520.1| conserved hypothetical protein [Escherichia coli 042]
 gi|290761481|gb|ADD55442.1| conserved hypothetical protein [Escherichia coli O55:H7 str.
           CB9615]
 gi|291325300|gb|EFE64715.1| metalloprotease ybeY [Escherichia coli B088]
 gi|291434011|gb|EFF06984.1| metalloprotease ybeY [Escherichia coli B185]
 gi|294491060|gb|ADE89816.1| conserved hypothetical protein [Escherichia coli IHE3034]
 gi|299878162|gb|EFI86373.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           196-1]
 gi|300314164|gb|EFJ63948.1| hypothetical protein HMPREF9547_04899 [Escherichia coli MS 175-1]
 gi|300449564|gb|EFK13184.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           116-1]
 gi|300457115|gb|EFK20608.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 21-1]
 gi|300524372|gb|EFK45441.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           119-7]
 gi|300529517|gb|EFK50579.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           107-1]
 gi|301077695|gb|EFK92501.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           146-1]
 gi|306907326|gb|EFN37831.1| protein of unknown function UPF0054 [Escherichia coli W]
 gi|307627910|gb|ADN72214.1| putative metalloprotease [Escherichia coli UM146]
 gi|308120847|gb|EFO58109.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           145-7]
 gi|309700897|emb|CBJ00194.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
 gi|310337385|gb|EFQ02523.1| uncharacterized family UPF0054 family protein [Escherichia coli
           1827-70]
 gi|313649695|gb|EFS14119.1| uncharacterized family UPF0054 family protein [Shigella flexneri 2a
           str. 2457T]
 gi|315059913|gb|ADT74240.1| conserved protein [Escherichia coli W]
 gi|315135325|dbj|BAJ42484.1| hypothetical protein ECDH1ME8569_0628 [Escherichia coli DH1]
 gi|315287092|gb|EFU46506.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           110-3]
 gi|315616420|gb|EFU97037.1| uncharacterized family UPF0054 family protein [Escherichia coli
           3431]
 gi|320174709|gb|EFW49841.1| putative metalloprotease [Shigella dysenteriae CDC 74-1112]
 gi|320183047|gb|EFW57912.1| putative metalloprotease [Shigella flexneri CDC 796-83]
 gi|320198215|gb|EFW72819.1| putative metalloprotease [Escherichia coli EC4100B]
 gi|320638109|gb|EFX07873.1| metal-binding heat shock protein [Escherichia coli O157:H7 str.
           G5101]
 gi|320643513|gb|EFX12683.1| metal-binding heat shock protein [Escherichia coli O157:H- str.
           493-89]
 gi|320648848|gb|EFX17475.1| metal-binding heat shock protein [Escherichia coli O157:H- str. H
           2687]
 gi|320654432|gb|EFX22479.1| metal-binding heat shock protein [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320660114|gb|EFX27644.1| metal-binding heat shock protein [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664912|gb|EFX32047.1| metal-binding heat shock protein [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153614|gb|EFZ39862.1| hypothetical protein ECEPECA14_4414 [Escherichia coli EPECa14]
 gi|323158886|gb|EFZ44897.1| hypothetical protein ECE128010_4803 [Escherichia coli E128010]
 gi|323170784|gb|EFZ56434.1| hypothetical protein ECLT68_4849 [Escherichia coli LT-68]
 gi|323179862|gb|EFZ65419.1| hypothetical protein ECOK1180_1271 [Escherichia coli 1180]
 gi|323379523|gb|ADX51791.1| protein of unknown function UPF0054 [Escherichia coli KO11]
 gi|323938420|gb|EGB34674.1| hypothetical protein ERCG_00456 [Escherichia coli E1520]
 gi|323943073|gb|EGB39232.1| hypothetical protein ERDG_00410 [Escherichia coli E482]
 gi|323945134|gb|EGB41196.1| hypothetical protein EREG_03318 [Escherichia coli H120]
 gi|323952770|gb|EGB48638.1| hypothetical protein ERKG_00543 [Escherichia coli H252]
 gi|323958412|gb|EGB54118.1| hypothetical protein ERLG_00402 [Escherichia coli H263]
 gi|323967605|gb|EGB63021.1| hypothetical protein ERJG_01183 [Escherichia coli M863]
 gi|323972113|gb|EGB67327.1| hypothetical protein ERHG_01926 [Escherichia coli TA007]
 gi|323976359|gb|EGB71449.1| hypothetical protein ERFG_02795 [Escherichia coli TW10509]
 gi|324006278|gb|EGB75497.1| hypothetical protein HMPREF9532_04037 [Escherichia coli MS 57-2]
 gi|324016066|gb|EGB85285.1| hypothetical protein HMPREF9542_05327 [Escherichia coli MS 117-3]
 gi|324114780|gb|EGC08748.1| hypothetical protein ERIG_00774 [Escherichia fergusonii B253]
 gi|324116733|gb|EGC10648.1| hypothetical protein ERBG_03409 [Escherichia coli E1167]
 gi|325498162|gb|EGC96021.1| metal-binding heat shock protein required for rRNA maturation
           [Escherichia fergusonii ECD227]
 gi|327254343|gb|EGE65965.1| hypothetical protein ECSTEC7V_0796 [Escherichia coli STEC_7v]
 gi|331037960|gb|EGI10180.1| putative metalloprotease YbeY [Escherichia coli H736]
 gi|331049950|gb|EGI22008.1| putative metalloprotease YbeY [Escherichia coli M718]
 gi|331066238|gb|EGI38122.1| putative metalloprotease YbeY [Escherichia coli TA271]
 gi|331070659|gb|EGI42022.1| putative metalloprotease YbeY [Escherichia coli TA280]
 gi|331076379|gb|EGI47661.1| putative metalloprotease YbeY [Escherichia coli H591]
 gi|332097751|gb|EGJ02725.1| hypothetical protein SB359474_0560 [Shigella boydii 3594-74]
 gi|332104153|gb|EGJ07499.1| conserved hypothetical protein [Shigella sp. D9]
 gi|332760969|gb|EGJ91257.1| hypothetical protein SF434370_0836 [Shigella flexneri 4343-70]
 gi|332761159|gb|EGJ91445.1| hypothetical protein SF274771_0770 [Shigella flexneri 2747-71]
 gi|332763338|gb|EGJ93578.1| hypothetical protein SFK671_0733 [Shigella flexneri K-671]
 gi|332768237|gb|EGJ98422.1| conserved protein involved in translation [Shigella flexneri
           2930-71]
 gi|333007427|gb|EGK26907.1| hypothetical protein SFVA6_1074 [Shigella flexneri VA-6]
 gi|333008105|gb|EGK27581.1| hypothetical protein SFK218_0936 [Shigella flexneri K-218]
 gi|333010075|gb|EGK29510.1| hypothetical protein SFK272_0934 [Shigella flexneri K-272]
 gi|333020906|gb|EGK40166.1| hypothetical protein SFK227_0890 [Shigella flexneri K-227]
 gi|333021512|gb|EGK40762.1| hypothetical protein SFK304_0840 [Shigella flexneri K-304]
          Length = 155

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|218699023|ref|YP_002406652.1| putative metalloprotease [Escherichia coli IAI39]
 gi|226710476|sp|B7NM10|RRMF_ECO7I RecName: Full=Probable rRNA maturation factor YbeY
 gi|218369009|emb|CAR16763.1| putative metal-dependent hydrolase [Escherichia coli IAI39]
          Length = 155

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   DS     
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDSAESHC 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|78048198|ref|YP_364373.1| putative metalloprotease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325925033|ref|ZP_08186455.1| hypothetical protein TIGR00043 [Xanthomonas perforans 91-118]
 gi|123730288|sp|Q3BS90|RRMF_XANC5 RecName: Full=Probable rRNA maturation factor
 gi|78036628|emb|CAJ24319.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325544545|gb|EGD15906.1| hypothetical protein TIGR00043 [Xanthomonas perforans 91-118]
          Length = 161

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++ 
Sbjct: 42  ADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY
Sbjct: 102 REAAEQGKLLAAHYAHLTVHGTLHLLGWDHEDDKEAEAMEQLEREILADLGIDDPY 157


>gi|170718769|ref|YP_001783953.1| hypothetical protein HSM_0615 [Haemophilus somnus 2336]
 gi|238688012|sp|B0US54|RRMF_HAES2 RecName: Full=Probable rRNA maturation factor
 gi|168826898|gb|ACA32269.1| protein of unknown function UPF0054 [Haemophilus somnus 2336]
          Length = 154

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 86/159 (54%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKEN-IVELSLVFTDSHRIET 69
           +DLQIA E+A      +L ++ ++        L +      EN   E+++   D      
Sbjct: 6   IDLQIASEDA-----TNLPSVEQI-------QLWANAAIRAENSQPEMTVRIVDEEESHH 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F   D     ++GD+V+  +++E EA    K    H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FECPDEIELPLIGDLVICRQVVEREATEQEKPLMAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I+HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 IVHGSLHLLGYDHIEDDEAEEMERLETEIMLSLGFTDPY 150


>gi|300920524|ref|ZP_07136950.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           115-1]
 gi|300412463|gb|EFJ95773.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           115-1]
          Length = 155

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|323163922|gb|EFZ49731.1| hypothetical protein SS53G_5761 [Shigella sonnei 53G]
 gi|323184986|gb|EFZ70353.1| hypothetical protein ECOK1357_1645 [Escherichia coli 1357]
          Length = 152

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 3   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 51  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 109 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 147


>gi|194434467|ref|ZP_03066728.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|194417318|gb|EDX33426.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|320178450|gb|EFW53418.1| putative metalloprotease [Shigella boydii ATCC 9905]
 gi|332094331|gb|EGI99382.1| hypothetical protein SB521682_0667 [Shigella boydii 5216-82]
 gi|332096773|gb|EGJ01763.1| hypothetical protein SD15574_0958 [Shigella dysenteriae 155-74]
          Length = 155

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTVRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|114798379|ref|YP_758839.1| hypothetical protein HNE_0105 [Hyphomonas neptunium ATCC 15444]
 gi|123129252|sp|Q0C604|RRMF_HYPNA RecName: Full=Probable rRNA maturation factor
 gi|114738553|gb|ABI76678.1| conserved hypothetical protein TIGR00043 [Hyphomonas neptunium ATCC
           15444]
          Length = 150

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 80/155 (51%), Gaps = 12/155 (7%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           VE+  W     L  LC   F  A        Y        ++L+  D+H +  LN ++R 
Sbjct: 8   VEDDSWAALGDLEALCRKAFDAA-------EYVAPVEEGNIALLLADNHVLHQLNLDFRS 60

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            DKPT+VLSFP+            LGDI +A+ +   +A + GK  + HLVHL+IHG+LH
Sbjct: 61  KDKPTDVLSFPSL-----PMDRPFLGDIAVAWGVSASDAKIQGKPLDAHLVHLLIHGYLH 115

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           LLG+DH  D +A  ME LE   L  L I +PY  D
Sbjct: 116 LLGFDHETDDEAAEMEALEIKALASLDIANPYRND 150


>gi|88860581|ref|ZP_01135219.1| hypothetical protein PTD2_16192 [Pseudoalteromonas tunicata D2]
 gi|88817779|gb|EAR27596.1| hypothetical protein PTD2_16192 [Pseudoalteromonas tunicata D2]
          Length = 152

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 2/116 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++   D    + LN +YRG +KPTNVLSFP  F +  G    ++GD+++  +++  EA
Sbjct: 37  ELTIRIADEAESQQLNNDYRGKNKPTNVLSFP--FEAPPGIELPLVGDLIICPQVVYQEA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
               K F +H  H+++HG LHLLG+DH++ +DA  ME  E+ IL  LGI+DPY  D
Sbjct: 95  LEQEKSFHDHFAHMVVHGCLHLLGFDHIEAEDAEEMESNEKEILAKLGISDPYRDD 150


>gi|119477444|ref|ZP_01617635.1| hypothetical protein GP2143_00682 [marine gamma proteobacterium
           HTCC2143]
 gi|119449370|gb|EAW30609.1| hypothetical protein GP2143_00682 [marine gamma proteobacterium
           HTCC2143]
          Length = 166

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E+    D     +  + V A   S+        +EN VEL++   D    + L
Sbjct: 6   VDLQIASED---DDHPPPASFEQWVQAAVASH--------QEN-VELTVRIVDEEESQYL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRGI+KPTNVLSFP      D     +LGD+++   ++  EA    K    H  H++
Sbjct: 54  NDRYRGINKPTNVLSFPADL--PDHIDIPLLGDLIICAPVVAQEAKAQNKPCLCHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH+DD DA  ME LE  IL  L I +PY ++
Sbjct: 112 VHGTLHLLGYDHIDDHDAEEMEALEVKILASLEIANPYSIN 152


>gi|167643996|ref|YP_001681659.1| hypothetical protein Caul_0023 [Caulobacter sp. K31]
 gi|189030198|sp|B0T157|RRMF_CAUSK RecName: Full=Probable rRNA maturation factor
 gi|167346426|gb|ABZ69161.1| protein of unknown function UPF0054 [Caulobacter sp. K31]
          Length = 162

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 1/110 (0%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++  D   ++TLN ++R  D  TNVLSFP+   S        +GDI LA+ + + EA   
Sbjct: 46  ILLADDDSVQTLNRDFRQKDYATNVLSFPS-VTSPGANPEGQIGDIALAFGVCQREAAEQ 104

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           GK   +HL HL+ HG LHLLGYDH DD DA  ME  ER IL  L I DPY
Sbjct: 105 GKSLAHHLQHLVAHGVLHLLGYDHQDDADAEAMEAFEREILAGLDIPDPY 154


>gi|15800372|ref|NP_286384.1| putative metalloprotease [Escherichia coli O157:H7 EDL933]
 gi|15829951|ref|NP_308724.1| metalloprotease [Escherichia coli O157:H7 str. Sakai]
 gi|168752228|ref|ZP_02777250.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758301|ref|ZP_02783308.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764665|ref|ZP_02789672.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168767105|ref|ZP_02792112.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777601|ref|ZP_02802608.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779149|ref|ZP_02804156.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786508|ref|ZP_02811515.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168802432|ref|ZP_02827439.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|195939396|ref|ZP_03084778.1| putative metalloprotease [Escherichia coli O157:H7 str. EC4024]
 gi|208808538|ref|ZP_03250875.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816422|ref|ZP_03257601.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822844|ref|ZP_03263162.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209397406|ref|YP_002269294.1| hypothetical protein ECH74115_0752 [Escherichia coli O157:H7 str.
           EC4115]
 gi|217326196|ref|ZP_03442280.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254791822|ref|YP_003076659.1| putative metalloprotease [Escherichia coli O157:H7 str. TW14359]
 gi|261224127|ref|ZP_05938408.1| hypothetical protein EscherichiacoliO157_05909 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257821|ref|ZP_05950354.1| hypothetical protein EscherichiacoliO157EcO_18684 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|26006914|sp|Q8XBK1|RRMF_ECO57 RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704000|sp|B5YQL0|RRMF_ECO5E RecName: Full=Probable rRNA maturation factor YbeY
 gi|12513568|gb|AAG54992.1|AE005245_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13360155|dbj|BAB34120.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767195|gb|EDU31039.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188013886|gb|EDU52008.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189002868|gb|EDU71854.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354845|gb|EDU73264.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363348|gb|EDU81767.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365375|gb|EDU83791.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373611|gb|EDU92027.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189375556|gb|EDU93972.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208728339|gb|EDZ77940.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733070|gb|EDZ81758.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208737037|gb|EDZ84721.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158806|gb|ACI36239.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209776880|gb|ACI86752.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|209776882|gb|ACI86753.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|209776886|gb|ACI86755.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|217322417|gb|EEC30841.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254591222|gb|ACT70583.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|320193065|gb|EFW67705.1| putative metalloprotease [Escherichia coli O157:H7 str. EC1212]
 gi|326341409|gb|EGD65201.1| putative metalloprotease [Escherichia coli O157:H7 str. 1044]
 gi|326345811|gb|EGD69550.1| putative metalloprotease [Escherichia coli O157:H7 str. 1125]
          Length = 155

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQMVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|113460492|ref|YP_718555.1| metal-dependent hydrolase [Haemophilus somnus 129PT]
 gi|123327121|sp|Q0I1E6|RRMF_HAES1 RecName: Full=Probable rRNA maturation factor
 gi|112822535|gb|ABI24624.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 154

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D      LN  YRG DKPTNVLSFP  F   D     ++GD+V+  +++E EA
Sbjct: 40  EMTVRIVDEEESHHLNLTYRGKDKPTNVLSFP--FECPDEIELPLIGDLVICRQVVEREA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K    H  H+I+HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 98  TEQEKPLMAHWAHMIVHGSLHLLGYDHIEDDEAEEMERLETEIMLSLGFTDPY 150


>gi|170767743|ref|ZP_02902196.1| conserved hypothetical protein [Escherichia albertii TW07627]
 gi|170123231|gb|EDS92162.1| conserved hypothetical protein [Escherichia albertii TW07627]
          Length = 155

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+ V + LV  D+    +
Sbjct: 6   LDLQLACEDNSGQPEESQFQTWLNAVIPQ----------FQEESEVTIRLV--DTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEQEALEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|67459578|ref|YP_247202.1| putative metalloprotease [Rickettsia felis URRWXCal2]
 gi|75536024|sp|Q4UK98|RRMF_RICFE RecName: Full=Probable rRNA maturation factor
 gi|67005111|gb|AAY62037.1| Conserved hypothetical protein [Rickettsia felis URRWXCal2]
          Length = 167

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL-------- 99
           F K    ELS++ T++  I TLN ++R I+K TNVLSFP+      D  S L        
Sbjct: 38  FSKIKQFELSILLTNTAEILTLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDY 97

Query: 100 -MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 98  IHLGDIAFCYEVIYNESCEQQKNFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI+ PY
Sbjct: 158 LSYFGISSPY 167


>gi|254373021|ref|ZP_04988510.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570748|gb|EDN36402.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 168

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V LS+V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 34  LVADKHHISHAEVNLSIVSNDE--IQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 89

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 90  DFLGDIVIAPAVLENEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 149

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 150 LAQLGIANPY 159


>gi|254461073|ref|ZP_05074489.1| conserved hypothetical protein TIGR00043 [Rhodobacterales bacterium
           HTCC2083]
 gi|206677662|gb|EDZ42149.1| conserved hypothetical protein TIGR00043 [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 162

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 16/162 (9%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E++ W   + L TL E    K ++ L      +   + E++++  D  RI  LN E+R 
Sbjct: 7   IEDSRWQ-TVDLATLAETAARKTLTQL-----DLDPTVFEIAILACDDTRIAELNTEFRD 60

Query: 77  IDKPTNVLSFPTAFASSD--GCSS--------LMLGDIVLAYEIIEIEANVLGKEFENHL 126
              PTNVLS+P+   +SD  G             LGDI ++Y+    EA    K   +H 
Sbjct: 61  KPTPTNVLSWPSDERASDIDGARPEKPVLPMDAELGDIAISYDTCAREAQSANKPLTDHT 120

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            HLIIHG LHLLGYDH+ D DA +ME  E  IL  LG++ PY
Sbjct: 121 THLIIHGVLHLLGYDHIRDLDATLMEQTEVLILGTLGVDTPY 162


>gi|51473908|ref|YP_067665.1| putative metalloprotease [Rickettsia typhi str. Wilmington]
 gi|59799025|sp|Q68W09|RRMF_RICTY RecName: Full=Probable rRNA maturation factor
 gi|51460220|gb|AAU04183.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
          Length = 167

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 11/151 (7%)

Query: 29  RTLCEVVFAKAVSN-LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           R + + +  K   N L+   +F K    ELS++ T++  I TLN ++R I+K TNVLSFP
Sbjct: 17  RKINKGLIKKITQNVLVRFDHFDKIKQFELSILLTNTAEILTLNQQFRSIEKATNVLSFP 76

Query: 88  TAFASSDGCSS----------LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
               +     S          + LGDI   YE+I  E+    K FENH +H++IH  LHL
Sbjct: 77  NNELNWHNLYSKLEFLYYSDYMHLGDIAFCYEVIYNESCEQQKTFENHFIHMLIHSILHL 136

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +G+DH +D DA +ME LE  IL   GI  PY
Sbjct: 137 IGFDHQNDTDANIMESLEIEILSYFGIPSPY 167


>gi|332678363|gb|AEE87492.1| predicted metal-dependent hydrolase [Francisella cf. novicida Fx1]
          Length = 162

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V LS+V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 28  LVADKHHISHAEVNLSIVSND--EIQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 83

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 84  DFLGDIVIAPAVLENEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 143

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 144 LAQLGIANPY 153


>gi|259909114|ref|YP_002649470.1| hypothetical protein YbeY [Erwinia pyrifoliae Ep1/96]
 gi|224964736|emb|CAX56253.1| conserved uncharacterized protein YbeY [Erwinia pyrifoliae Ep1/96]
 gi|283479141|emb|CAY75057.1| putative metalloprotease ybeY [Erwinia pyrifoliae DSM 12163]
          Length = 155

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D      LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA
Sbjct: 40  EVTIRLVDEAESHQLNHTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K  E H  H++IHG LHLLGYDH+ D +A  ME LE  I+  LG  DPY
Sbjct: 98  AEQEKVLEAHWAHMVIHGSLHLLGYDHIVDDEAEEMESLETEIMLALGYPDPY 150


>gi|78484820|ref|YP_390745.1| hypothetical protein Tcr_0475 [Thiomicrospira crunogena XCL-2]
 gi|123555910|sp|Q31IF2|RRMF_THICR RecName: Full=Probable rRNA maturation factor
 gi|78363106|gb|ABB41071.1| Conserved hypothetical protein; UPF0054 [Thiomicrospira crunogena
           XCL-2]
          Length = 160

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 88/166 (53%), Gaps = 14/166 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD Q+A E     DE  L T  + +    V+ L  +     +   EL++   D   I+TL
Sbjct: 4   LDYQVAAEEV---DEAELPTYEQCLKWVEVALLDDR----LDGETELTIRIVDEDEIQTL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD-----GCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           N +YRG D+ TNVLSFP  F +       G     +GD+V+  +++  EA    K  E H
Sbjct: 57  NRDYRGKDQTTNVLSFP--FENPPVLVDLGEELPYIGDLVICAQVVAQEAKAQHKPLEAH 114

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H++IHG LHL G DHVDD +A  ME LE  IL DLG + PYE D
Sbjct: 115 WAHMVIHGCLHLQGMDHVDDDEAIKMEALEAEILADLGYDSPYESD 160


>gi|332306416|ref|YP_004434267.1| hypothetical protein Glaag_2054 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173745|gb|AEE22999.1| protein of unknown function UPF0054 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 152

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D    + LN  YRG DKPTNVLSFP  F +  G S  +LGD+V+   ++  EA
Sbjct: 39  EITVRIVDKEESQDLNHTYRGKDKPTNVLSFP--FEAPPGLSLNLLGDLVVCASVVADEA 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               K   +H  H+I+HG LHLLG+DH+ D +A  ME +E  IL+   I+DPY+
Sbjct: 97  KEQHKALAHHWAHMIVHGALHLLGFDHITDDEAQQMEAVEVIILKQFSIDDPYQ 150


>gi|89053194|ref|YP_508645.1| hypothetical protein Jann_0703 [Jannaschia sp. CCS1]
 gi|122499500|sp|Q28UJ2|RRMF_JANSC RecName: Full=Probable rRNA maturation factor
 gi|88862743|gb|ABD53620.1| protein of unknown function UPF0054 [Jannaschia sp. CCS1]
          Length = 160

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 80/146 (54%), Gaps = 10/146 (6%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           LC +  +  V+ L      +  +   LS++  D  RI TLN ++RG   PTNVLS+P+  
Sbjct: 17  LCGLAQSACVATLTD--LSLDPDDFALSILACDDARIATLNTQFRGKPTPTNVLSWPSED 74

Query: 91  ASSDGCSSLM--------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
            + +   ++         LGD+ LA+E    EA   GK   +H+ HLI+HG LH LG+DH
Sbjct: 75  RAPETPGAMPHLSDLAAELGDLALAFETCAREAADGGKPLPDHISHLIVHGLLHCLGFDH 134

Query: 143 VDDKDACVMEGLERSILEDLGINDPY 168
             D DA +ME LE  IL  LG+ DPY
Sbjct: 135 ETDADADLMERLETRILARLGVPDPY 160


>gi|15604575|ref|NP_221093.1| putative metalloprotease [Rickettsia prowazekii str. Madrid E]
 gi|2073493|emb|CAA72455.1| hypothetical protein [Rickettsia prowazekii]
 gi|3861270|emb|CAA15169.1| unknown [Rickettsia prowazekii]
          Length = 180

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K    ELS++ T++  I TLN ++R I+K TNVLSFP    +     S          
Sbjct: 51  FSKIKQFELSILLTNTAEILTLNQQFRSIEKATNVLSFPNNELNWHNLYSKLEFLYYSDY 110

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +H++IH  LHL+G+DH +D DA +ME LE  I
Sbjct: 111 MHLGDIAFCYEVIYNESCEQQKTFENHFIHMLIHSILHLIGFDHQNDTDANIMESLEIEI 170

Query: 159 LEDLGINDPY 168
           L   GI  PY
Sbjct: 171 LSYFGIPSPY 180


>gi|322833886|ref|YP_004213913.1| hypothetical protein Rahaq_3192 [Rahnella sp. Y9602]
 gi|321169087|gb|ADW74786.1| protein of unknown function UPF0054 [Rahnella sp. Y9602]
          Length = 157

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 92/160 (57%), Gaps = 17/160 (10%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV-FTDSHRIE 68
           LDLQIA E+A     E   +T  E V  +          F +E+ V + LV   +SH   
Sbjct: 6   LDLQIACEDAAGLPSENDFQTWLEAVLPQ----------FQEESEVTIRLVDIPESHE-- 53

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YRG+DKPTNVLSFP  F +  G    +LGD+++  +++E EA    KE   H  H
Sbjct: 54  -LNMTYRGMDKPTNVLSFP--FEAPPGMEMPLLGDLIICRQVVEKEAKEQDKELLAHWAH 110

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++IHG LHLLGYDH+ D++A  ME +E  I++ LG  DPY
Sbjct: 111 MVIHGSLHLLGYDHIVDEEAEEMESIETEIMQGLGYPDPY 150


>gi|11387300|sp|P57517|RRMF_BUCAI RecName: Full=Probable rRNA maturation factor
          Length = 155

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 6/136 (4%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           ++ F K +  ++ K    K+NI  +++   D   I+ LNF YR  +KPTN+LSFP  F  
Sbjct: 21  KLYFKKWIQKILCK----KKNINIITIRIVDEWEIKKLNFNYRKKNKPTNILSFP--FNK 74

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
               +  +LGD+VL   IIE E+    K  E+H  H+ IHG LHLLGYDH ++K+A +ME
Sbjct: 75  FIKINYKLLGDLVLCKNIIEKESLKYNKSLESHWAHITIHGTLHLLGYDHQNNKEADIME 134

Query: 153 GLERSILEDLGINDPY 168
            LE  I+  L    P+
Sbjct: 135 RLENKIMLSLNYKKPH 150


>gi|26246634|ref|NP_752674.1| putative metalloprotease [Escherichia coli CFT073]
 gi|110640881|ref|YP_668609.1| putative metalloprotease [Escherichia coli 536]
 gi|170681098|ref|YP_001742777.1| putative metalloprotease [Escherichia coli SMS-3-5]
 gi|191173958|ref|ZP_03035476.1| conserved hypothetical protein [Escherichia coli F11]
 gi|215485692|ref|YP_002328123.1| putative metalloprotease [Escherichia coli O127:H6 str. E2348/69]
 gi|227884367|ref|ZP_04002172.1| metal-dependent hydrolase [Escherichia coli 83972]
 gi|293408784|ref|ZP_06652623.1| metalloprotease [Escherichia coli B354]
 gi|300989981|ref|ZP_07179057.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 45-1]
 gi|300996643|ref|ZP_07181501.1| hypothetical protein HMPREF9553_04968 [Escherichia coli MS 200-1]
 gi|301025207|ref|ZP_07188778.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 69-1]
 gi|301049851|ref|ZP_07196789.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           185-1]
 gi|306812917|ref|ZP_07447110.1| putative metalloprotease [Escherichia coli NC101]
 gi|312965100|ref|ZP_07779337.1| uncharacterized family UPF0054 family protein [Escherichia coli
           2362-75]
 gi|331645816|ref|ZP_08346919.1| putative metalloprotease YbeY [Escherichia coli M605]
 gi|331656681|ref|ZP_08357643.1| putative metalloprotease YbeY [Escherichia coli TA206]
 gi|331682077|ref|ZP_08382701.1| putative metalloprotease YbeY [Escherichia coli H299]
 gi|29428208|sp|Q8FJY3|RRMF_ECOL6 RecName: Full=Probable rRNA maturation factor YbeY
 gi|123049385|sp|Q0TK21|RRMF_ECOL5 RecName: Full=Probable rRNA maturation factor YbeY
 gi|226710479|sp|B1LLB0|RRMF_ECOSM RecName: Full=Probable rRNA maturation factor YbeY
 gi|254807364|sp|B7UKU2|RRMF_ECO27 RecName: Full=Probable rRNA maturation factor YbeY
 gi|26107033|gb|AAN79217.1|AE016757_121 Hypothetical protein ybeY [Escherichia coli CFT073]
 gi|110342473|gb|ABG68710.1| hypothetical protein YbeY [Escherichia coli 536]
 gi|170518816|gb|ACB16994.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
 gi|190905734|gb|EDV65355.1| conserved hypothetical protein [Escherichia coli F11]
 gi|215263764|emb|CAS08100.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|222032412|emb|CAP75151.1| metalloprotease ybeY [Escherichia coli LF82]
 gi|227838453|gb|EEJ48919.1| metal-dependent hydrolase [Escherichia coli 83972]
 gi|281177807|dbj|BAI54137.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|291471962|gb|EFF14445.1| metalloprotease [Escherichia coli B354]
 gi|300298385|gb|EFJ54770.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           185-1]
 gi|300304472|gb|EFJ58992.1| hypothetical protein HMPREF9553_04968 [Escherichia coli MS 200-1]
 gi|300396159|gb|EFJ79697.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 69-1]
 gi|300407256|gb|EFJ90794.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 45-1]
 gi|305853680|gb|EFM54119.1| putative metalloprotease [Escherichia coli NC101]
 gi|307552523|gb|ADN45298.1| putative metal-dependent hydrolase YbeY [Escherichia coli ABU
           83972]
 gi|312290191|gb|EFR18074.1| uncharacterized family UPF0054 family protein [Escherichia coli
           2362-75]
 gi|312945199|gb|ADR26026.1| putative metalloprotease [Escherichia coli O83:H1 str. NRG 857C]
 gi|315292082|gb|EFU51434.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           153-1]
 gi|315299191|gb|EFU58445.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 16-3]
 gi|320194165|gb|EFW68797.1| putative metalloprotease [Escherichia coli WV_060327]
 gi|323191292|gb|EFZ76556.1| hypothetical protein ECRN5871_0581 [Escherichia coli RN587/1]
 gi|324010386|gb|EGB79605.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 60-1]
 gi|330910416|gb|EGH38926.1| metal-dependent hydrolase [Escherichia coli AA86]
 gi|331044568|gb|EGI16695.1| putative metalloprotease YbeY [Escherichia coli M605]
 gi|331054929|gb|EGI26938.1| putative metalloprotease YbeY [Escherichia coli TA206]
 gi|331080756|gb|EGI51930.1| putative metalloprotease YbeY [Escherichia coli H299]
          Length = 155

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME +E  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEAIETEIMLALGYEDPY 150


>gi|292487619|ref|YP_003530491.1| putative metalloprotease ybeY [Erwinia amylovora CFBP1430]
 gi|292898857|ref|YP_003538226.1| hypothetical protein EAM_1139 [Erwinia amylovora ATCC 49946]
 gi|291198705|emb|CBJ45814.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|291553038|emb|CBA20083.1| putative metalloprotease ybeY [Erwinia amylovora CFBP1430]
 gi|312171726|emb|CBX79984.1| putative metalloprotease ybeY [Erwinia amylovora ATCC BAA-2158]
          Length = 155

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 89/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E+     +  L T  E  F + +  ++ +  F  E+ V + LV  D      L
Sbjct: 6   LDLQLACES-----QQGLPT--EADFQRWLEAVLPQ--FQSESEVTIRLV--DEAESHHL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG +KPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NHTYRGKEKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEHEAAEQEKALEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH+ D +A  ME LE  I+  LG  DPY
Sbjct: 113 IHGSLHLLGYDHIVDDEAEEMESLETEIMLALGYPDPY 150


>gi|300715841|ref|YP_003740644.1| conserved uncharacterized protein YbeY [Erwinia billingiae Eb661]
 gi|299061677|emb|CAX58793.1| conserved uncharacterized protein YbeY [Erwinia billingiae Eb661]
          Length = 157

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 86/159 (54%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E  A    E   R   E V  +          F +E+  E+++   D      
Sbjct: 6   LDLQLACEKPAGLPAESDFRRWLEAVLPQ----------FQEES--EVTVRVVDEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 54  LNHTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEKEAAEQEKPVLAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME +E  I+  LG +DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEADEMESIETEIMLALGYDDPY 150


>gi|26007037|sp|O05960|RRMF_RICPR RecName: Full=Probable rRNA maturation factor
 gi|292572382|gb|ADE30297.1| Putative metal-dependent hydrolase [Rickettsia prowazekii Rp22]
          Length = 167

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K    ELS++ T++  I TLN ++R I+K TNVLSFP    +     S          
Sbjct: 38  FSKIKQFELSILLTNTAEILTLNQQFRSIEKATNVLSFPNNELNWHNLYSKLEFLYYSDY 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +H++IH  LHL+G+DH +D DA +ME LE  I
Sbjct: 98  MHLGDIAFCYEVIYNESCEQQKTFENHFIHMLIHSILHLIGFDHQNDTDANIMESLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI  PY
Sbjct: 158 LSYFGIPSPY 167


>gi|239947061|ref|ZP_04698814.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921337|gb|EER21361.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 167

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K   +ELS++ T++  I TLN ++R I+K TNVLSFP+   +     S          
Sbjct: 38  FSKIKQLELSILLTNTVEILTLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDY 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 98  MHLGDIAFCYEVIYNESCEQQKTFENHFIHLLIHSVLHLIGFDHQNDTEANIMENLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI+ PY
Sbjct: 158 LSYFGISSPY 167


>gi|171473045|sp|A6V0C7|RRMF_PSEA7 RecName: Full=Probable rRNA maturation factor
          Length = 160

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 81/161 (50%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A + A    E   R  CE+   +   +             EL++   D      L
Sbjct: 5   LDLQVASDAADLPSEAQFRAWCELALRQRAES-------------ELTIRLVDEAEGLEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D  TNVLSFP A    +     +LGD+V+   ++  EA    K  + H  HL+
Sbjct: 52  NSTYRHKDYATNVLSFP-ADVPEEFLDIPLLGDLVICAPVVAREAREQHKPLQAHWAHLV 110

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 111 IHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 151


>gi|283784429|ref|YP_003364294.1| hypothetical protein ROD_06711 [Citrobacter rodentium ICC168]
 gi|282947883|emb|CBG87445.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 155

 Score =  101 bits (251), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 87/159 (54%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A EN A   +E   +T       +          F +E  V + LV  D      
Sbjct: 6   LDLQLACENNAGLPEEARFQTWLNAAIPQ----------FQEEAEVTIRLV--DEAESHD 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAREQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|163734561|ref|ZP_02142000.1| hypothetical protein RLO149_14078 [Roseobacter litoralis Och 149]
 gi|161392054|gb|EDQ16384.1| hypothetical protein RLO149_14078 [Roseobacter litoralis Och 149]
          Length = 166

 Score =  101 bits (251), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 12/127 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------------AFASSDGCSSLMLGD 103
           E+S +  D  RI  LN ++R     TNVLS+P             A  ++D    L LGD
Sbjct: 40  EVSYLACDDARITLLNADFREKTTATNVLSWPAVDLAPVIAGAVPAPPTADLTGVLALGD 99

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + +AYE    EA  L K   +H+ HLI+HG LHLLGYDH+ D DA +M+G+E  IL  +G
Sbjct: 100 VAIAYETCLREATDLRKPLADHVTHLIVHGTLHLLGYDHIRDPDATLMQGVEAKILGKMG 159

Query: 164 INDPYEV 170
           ++DPY V
Sbjct: 160 LDDPYMV 166


>gi|254470656|ref|ZP_05084059.1| diacyglycerol kinase [Pseudovibrio sp. JE062]
 gi|211959798|gb|EEA94995.1| diacyglycerol kinase [Pseudovibrio sp. JE062]
          Length = 168

 Score =  101 bits (251), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 76/115 (66%), Gaps = 1/115 (0%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+SLVFTD   I+ LN  +R  DKPTNVLSFP    S +     +LGDI++A E ++ E
Sbjct: 47  TEVSLVFTDDAHIQELNKMWRQKDKPTNVLSFP-GDDSEEPPFGPLLGDIIIANETVKRE 105

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           A  LG  FE+HL+HLI+HG LHL GYDH  D++A  ME  ER IL  L I DPY+
Sbjct: 106 AVELGIPFEHHLIHLIVHGTLHLFGYDHQIDEEAEEMEAEERLILASLQIPDPYK 160


>gi|296116297|ref|ZP_06834913.1| hypothetical protein GXY_10882 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977116|gb|EFG83878.1| hypothetical protein GXY_10882 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 192

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 13/165 (7%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVEL------SLVFTDSHRIET 69
           V    +GD+I + ++ E  + +A+ N   +    V+  + EL      ++V  D   +  
Sbjct: 18  VPQPPFGDDIDV-SITERRWHRAMPNPAREVQRAVRAAMRELDVSGAVTVVLADDLTVRR 76

Query: 70  LNFEYRGIDKPTNVLSF---PTAFASSDGCSSLML--GDIVLAYEIIEIEANVLGKEFEN 124
           LN  +RG +KPTNVL+F   P  +A +D  S + L  GDI+LA+  +E EA   G+   N
Sbjct: 77  LNHLHRGRNKPTNVLTFEYAPADYAPTDSGSGIWLWGGDIILAFATVEREARAAGRSVRN 136

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           H++HL++HG LHL GYDH    DA  ME  E  IL  +GI +P++
Sbjct: 137 HMMHLLVHGVLHLSGYDHHHAGDARAMEMEESRILGRMGIPNPWK 181


>gi|182678043|ref|YP_001832189.1| hypothetical protein Bind_1057 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|238691235|sp|B2IIK7|RRMF_BEII9 RecName: Full=Probable rRNA maturation factor
 gi|182633926|gb|ACB94700.1| protein of unknown function UPF0054 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 205

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+SL+F D   I  LN ++RG+DKPTNVLSFP+     D   + +LGDI++A+E    E
Sbjct: 50  AEVSLLFCDDAFIRGLNHQWRGLDKPTNVLSFPS---DEDLEDARLLGDIIIAFETSAGE 106

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H+ HL++HGFLHL+GYDH + ++A  ME +E+ IL DLGI DPY
Sbjct: 107 AKAEAKSLAAHVSHLVVHGFLHLIGYDHEEAEEAEEMERMEQVILADLGIADPY 160


>gi|218703992|ref|YP_002411511.1| putative metalloprotease [Escherichia coli UMN026]
 gi|293403920|ref|ZP_06647914.1| metalloprotease [Escherichia coli FVEC1412]
 gi|298379695|ref|ZP_06989300.1| metalloprotease ybeY [Escherichia coli FVEC1302]
 gi|300901172|ref|ZP_07119276.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           198-1]
 gi|331662026|ref|ZP_08362949.1| putative metalloprotease YbeY [Escherichia coli TA143]
 gi|226710478|sp|B7N9R4|RRMF_ECOLU RecName: Full=Probable rRNA maturation factor YbeY
 gi|218431089|emb|CAR11965.1| putative metal-dependent hydrolase [Escherichia coli UMN026]
 gi|291428506|gb|EFF01531.1| metalloprotease [Escherichia coli FVEC1412]
 gi|298279393|gb|EFI20901.1| metalloprotease ybeY [Escherichia coli FVEC1302]
 gi|300355386|gb|EFJ71256.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           198-1]
 gi|331060448|gb|EGI32412.1| putative metalloprotease YbeY [Escherichia coli TA143]
          Length = 155

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLIYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|56707741|ref|YP_169637.1| hypothetical protein FTT_0616c [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670212|ref|YP_666769.1| hypothetical protein FTF0616c [Francisella tularensis subsp.
           tularensis FSC198]
 gi|254370244|ref|ZP_04986250.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874554|ref|ZP_05247264.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|59799004|sp|Q5NH55|RRMF_FRATT RecName: Full=Probable rRNA maturation factor
 gi|123359556|sp|Q14IK7|RRMF_FRAT1 RecName: Full=Probable rRNA maturation factor
 gi|56604233|emb|CAG45249.1| cconserved hypothetical protein, UPF0054 family [Francisella
           tularensis subsp. tularensis SCHU S4]
 gi|110320545|emb|CAL08632.1| cconserved hypothetical protein, UPF0054 family [Francisella
           tularensis subsp. tularensis FSC198]
 gi|151568488|gb|EDN34142.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840553|gb|EET18989.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 168

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 34  LVANKHHISHAEVNLNIVSNDE--IQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 89

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 90  DFLGDIVIAPAVLENEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 149

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 150 LAQLGIANPY 159


>gi|254490268|ref|ZP_05103457.1| conserved hypothetical protein TIGR00043, putative [Methylophaga
           thiooxidans DMS010]
 gi|224464401|gb|EEF80661.1| conserved hypothetical protein TIGR00043, putative [Methylophaga
           thiooxydans DMS010]
          Length = 155

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 2/119 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           E   ELS+   D      LN +YRG   PTNVLSFP  F S       +LGD+V+   I+
Sbjct: 33  EEDCELSIRLVDEDESAELNSQYRGKTGPTNVLSFP--FDSDIALEPTLLGDLVICVPIV 90

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           E EA    K  E+H  H++IHG LHLLGYDH++D +A  ME LE  IL  + I +PYE+
Sbjct: 91  EKEAQQQDKIAEHHWAHMVIHGCLHLLGYDHIEDDEAEEMETLEIQILHKMNITNPYEL 149


>gi|157804110|ref|YP_001492659.1| putative metalloprotease [Rickettsia canadensis str. McKiel]
 gi|166227281|sp|A8EZU1|RRMF_RICCK RecName: Full=Probable rRNA maturation factor
 gi|157785373|gb|ABV73874.1| hypothetical protein A1E_04765 [Rickettsia canadensis str. McKiel]
          Length = 172

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 75/135 (55%), Gaps = 15/135 (11%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSS--------- 98
           F K    ELS++ T++  I TLN ++R IDK TNVLSFP+      D C S         
Sbjct: 38  FSKIKQFELSILLTNTAEILTLNKQFRNIDKATNVLSFPSNKLNWQDLCFSNVSPKLELL 97

Query: 99  -----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                + LGDI   YE+I  E+    K  ENH +HL+IH  LHL+G+DH +D +A +ME 
Sbjct: 98  IGYDYMHLGDIAFCYEVIYNESYEQQKTSENHFIHLLIHSILHLIGFDHQNDTEANIMEN 157

Query: 154 LERSILEDLGINDPY 168
           LE  IL   GI  PY
Sbjct: 158 LEIEILSYFGIASPY 172


>gi|56460051|ref|YP_155332.1| metal-dependent hydrolase [Idiomarina loihiensis L2TR]
 gi|59799006|sp|Q5QYC3|RRMF_IDILO RecName: Full=Probable rRNA maturation factor
 gi|56179061|gb|AAV81783.1| Predicted metal-dependent hydrolase [Idiomarina loihiensis L2TR]
          Length = 163

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 4/124 (3%)

Query: 49  FVKEN--IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVL 106
           +++EN   VEL++        + LN E+R  D  TNVLSFP  F S       +LGD+V+
Sbjct: 33  YLQENDKAVELTVRIAALEEAQQLNNEFRNKDYATNVLSFP--FNSPVELPVTLLGDLVI 90

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
              ++E EA    K   +H  H++IHG LHLLGYDH++D +A  ME +ER+IL  LGI+D
Sbjct: 91  CQSVVEREAEEQQKSAIDHWTHMVIHGTLHLLGYDHIEDDEAEEMEQIERNILASLGISD 150

Query: 167 PYEV 170
           PY+ 
Sbjct: 151 PYQT 154


>gi|224456812|ref|ZP_03665285.1| hypothetical protein FtultM_03352 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158912|gb|ADA78303.1| hypothetical protein NE061598_03525 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 162

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 28  LVANKHHISHAEVNLNIVSND--EIQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 83

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 84  DFLGDIVIAPAVLENEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 143

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 144 LAQLGIANPY 153


>gi|146279876|ref|YP_001170034.1| hypothetical protein Rsph17025_3874 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145558117|gb|ABP72729.1| hypothetical protein Rsph17025_3874 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 167

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 27/169 (15%)

Query: 17  VENALWGDEIHLRTLC----EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +E+  W +E+ L  L     E  FA    +L  +G+        L ++  D  RI  LN 
Sbjct: 9   IEDGRW-EELDLPALATRAAEATFAGL--DLRPEGFI-------LVVMGCDDARIAELNG 58

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCS-------------SLMLGDIVLAYEIIEIEANVLG 119
            +R   KPTNVLS+P+   +SD                   LGDI +AYE    EA   G
Sbjct: 59  TFRQKGKPTNVLSWPSEERASDEAGVAPEPPEPGEPEDPEHLGDIAIAYETCAREAAEQG 118

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           K   +H+ HL++HG LHLLGYDHVD+ DA +ME  E  IL  LG+ DPY
Sbjct: 119 KPVPDHVTHLLVHGILHLLGYDHVDEADADLMEATETRILAGLGVPDPY 167


>gi|254374471|ref|ZP_04989952.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151572190|gb|EDN37844.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 168

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 34  LVADKHHISHAEVNLNIVSNDE--IQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 89

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 90  DFLGDIVIAPAVLENEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 149

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 150 LAQLGIANPY 159


>gi|229587097|ref|YP_002845598.1| putative metalloprotease [Rickettsia africae ESF-5]
 gi|259645703|sp|C3PLL5|RRMF_RICAE RecName: Full=Probable rRNA maturation factor
 gi|228022147|gb|ACP53855.1| Putative metal-dependent hydrolase [Rickettsia africae ESF-5]
          Length = 167

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------AFASSDGCSS 98
           F K    ELS++ T++  I TLN ++R I+K TNVLSFP+               D    
Sbjct: 38  FSKIKQFELSILLTNAAEILTLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLDDSDY 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 98  MHLGDIAFCYEVIYNESCEQHKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI  PY
Sbjct: 158 LSYFGIFPPY 167


>gi|118497656|ref|YP_898706.1| hypothetical protein FTN_1065 [Francisella tularensis subsp.
           novicida U112]
 gi|194323628|ref|ZP_03057404.1| conserved hypothetical protein, putative [Francisella tularensis
           subsp. novicida FTE]
 gi|208779717|ref|ZP_03247061.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|145572751|sp|A0Q6T7|RRMF_FRATN RecName: Full=Probable rRNA maturation factor
 gi|118423562|gb|ABK89952.1| conserved protein of unknown function [Francisella novicida U112]
 gi|194321992|gb|EDX19474.1| conserved hypothetical protein, putative [Francisella tularensis
           subsp. novicida FTE]
 gi|208744172|gb|EDZ90472.1| conserved hypothetical protein [Francisella novicida FTG]
          Length = 162

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 28  LVADKHHISHAEVNLNIVSND--EIQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 83

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 84  DFLGDIVIAPAVLENEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 143

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 144 LAQLGIANPY 153


>gi|157826181|ref|YP_001493901.1| putative metalloprotease [Rickettsia akari str. Hartford]
 gi|166229073|sp|A8GPR8|RRMF_RICAH RecName: Full=Probable rRNA maturation factor
 gi|157800139|gb|ABV75393.1| hypothetical protein A1C_05790 [Rickettsia akari str. Hartford]
          Length = 167

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K    ELS++ T++  I TLN ++R I+K TNVL+FP+   +     S          
Sbjct: 38  FSKIKQFELSMLLTNTAEILTLNKQFRNIEKATNVLAFPSNELNWQDLYSKLEFLGDSDY 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGD+   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 98  MHLGDVAFCYEVIYNESCEQQKTFENHFIHLLIHSILHLIGFDHQNDTEAHIMENLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI+ PY
Sbjct: 158 LSYFGISSPY 167


>gi|167010863|ref|ZP_02275794.1| hypothetical protein Ftulh_09158 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254369232|ref|ZP_04985244.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|145558840|sp|Q2A3U8|RRMF_FRATH RecName: Full=Probable rRNA maturation factor
 gi|157122182|gb|EDO66322.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 168

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 34  LVADKHHISHAEVNLNIVSNDE--IQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 89

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 90  DFLGDIVIAPAVLENEAKEQNKEINDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 149

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 150 LAQLGIANPY 159


>gi|87199002|ref|YP_496259.1| hypothetical protein Saro_0980 [Novosphingobium aromaticivorans DSM
           12444]
 gi|123490218|sp|Q2G9P8|RRMF_NOVAD RecName: Full=Probable rRNA maturation factor
 gi|87134683|gb|ABD25425.1| protein of unknown function UPF0054 [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 167

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 14/173 (8%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++ P L++ I   + +WGD I      ++    A +          EN++ +S+V  D  
Sbjct: 1   MSAPILEMDI---DPVWGDAIDWE---DIASRAAEAAAKVAPELAHENLL-VSVVLADDD 53

Query: 66  RIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
            +  LN ++R  DKPTNVLSFP         A++D  +  MLGD++LA+ +   EA   G
Sbjct: 54  EVHALNKQWRAKDKPTNVLSFPMLSREEVLHAAADEGAPGMLGDMILAHGVCTREAAEKG 113

Query: 120 KEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYEVD 171
              E H  HL++HG LHL GYDH + + +A  ME LER  L  +GI DPY V+
Sbjct: 114 VSVETHATHLVVHGLLHLAGYDHELGEAEAEEMENLERKALALMGIADPYAVE 166


>gi|126727645|ref|ZP_01743477.1| hypothetical protein RB2150_15740 [Rhodobacterales bacterium
           HTCC2150]
 gi|126703061|gb|EBA02162.1| hypothetical protein RB2150_15740 [Rhodobacterales bacterium
           HTCC2150]
          Length = 188

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 12/124 (9%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------------LGDI 104
           +S++  D  +I TLN ++RG   PTNVLS+P+     +                  LGDI
Sbjct: 51  ISVLACDDAKIATLNADFRGKPTPTNVLSWPSEERGVEVAGDTPELPDIGQEIPYELGDI 110

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            ++++    EA V    FE H++HL+IHG LHLLGYDH+ DKDA +MEG+E  +L  LG+
Sbjct: 111 AISFDTCLQEAKVSNTPFEQHVLHLMIHGTLHLLGYDHIFDKDAALMEGIETEVLATLGV 170

Query: 165 NDPY 168
            DPY
Sbjct: 171 PDPY 174


>gi|114778655|ref|ZP_01453471.1| Predicted metal-dependent hydrolase [Mariprofundus ferrooxydans
           PV-1]
 gi|114551120|gb|EAU53681.1| Predicted metal-dependent hydrolase [Mariprofundus ferrooxydans
           PV-1]
          Length = 159

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 2/133 (1%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
            A AV    S   F  E +  L + F     +  LN ++RG+D  T+VLSFP    S   
Sbjct: 24  IAAAVQAACSVAGFQNEPM--LCIRFAGDAEVRELNSQWRGLDCVTDVLSFPMQDDSDAI 81

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
             +  LGDI LA   ++ EA  LG    +H++HLI+H  LHLL YDH+DD++A  M+ LE
Sbjct: 82  DPNQSLGDIALALPFVQQEAGRLGLPQADHILHLIVHATLHLLDYDHIDDEEAAQMQQLE 141

Query: 156 RSILEDLGINDPY 168
           R  ++ LG++DPY
Sbjct: 142 RQAMQQLGLHDPY 154


>gi|331005427|ref|ZP_08328807.1| A heat shock protein involved in translation [gamma proteobacterium
           IMCC1989]
 gi|330420760|gb|EGG95046.1| A heat shock protein involved in translation [gamma proteobacterium
           IMCC1989]
          Length = 177

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 5/128 (3%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L++K   V+    EL++   D    + LN +YR  DKPTNVLSFP      D     +LG
Sbjct: 50  LLNKPSLVQ---AELTIRLVDEPESQQLNNDYRQKDKPTNVLSFPADL--PDIVDLPLLG 104

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           D+++   ++  EA    K  ++H  H+++HG LHLLGYDH+D+ DA +ME +E  +L  +
Sbjct: 105 DLIICAPVVIKEAEEQQKPLQSHWAHMVVHGTLHLLGYDHIDENDANIMEAIETDVLAAM 164

Query: 163 GINDPYEV 170
           GI  PY V
Sbjct: 165 GIACPYTV 172


>gi|89256242|ref|YP_513604.1| hypothetical protein FTL_0884 [Francisella tularensis subsp.
           holarctica LVS]
 gi|89144073|emb|CAJ79323.1| cconserved hypothetical protein, UPF0054 family [Francisella
           tularensis subsp. holarctica LVS]
          Length = 173

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 39  LVADKHHISHAEVNLNIVSNDE--IQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 94

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 95  DFLGDIVIAPAVLENEAKEQNKEINDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 154

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 155 LAQLGIANPY 164


>gi|115314700|ref|YP_763423.1| hypothetical protein FTH_0870 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502302|ref|YP_001428367.1| hypothetical protein FTA_0935 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|290953584|ref|ZP_06558205.1| hypothetical protein FtulhU_04454 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313085|ref|ZP_06803775.1| hypothetical protein FtulhU_04439 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122325277|sp|Q0BM98|RRMF_FRATO RecName: Full=Probable rRNA maturation factor
 gi|171769928|sp|A7NBQ8|RRMF_FRATF RecName: Full=Probable rRNA maturation factor
 gi|115129599|gb|ABI82786.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156252905|gb|ABU61411.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 162

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 28  LVADKHHISHAEVNLNIVSND--EIQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 83

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 84  DFLGDIVIAPAVLENEAKEQNKEINDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 143

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 144 LAQLGIANPY 153


>gi|197106913|ref|YP_002132290.1| hypothetical protein PHZ_c3452 [Phenylobacterium zucineum HLK1]
 gi|196480333|gb|ACG79861.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 154

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 5/114 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++L+  D   +  LN  +RG D  TNVLSFP             LGD+ LA  +   EA 
Sbjct: 40  VTLLLADDAAVRELNARFRGKDSATNVLSFPAPP-----NPERHLGDVALACGVCAREAA 94

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             GK   +HL HL++HG LHLLGYDH+ + +A  MEGLER IL  LG+ DPY V
Sbjct: 95  EQGKPLAHHLQHLVVHGVLHLLGYDHMREDEAEAMEGLERDILAGLGVPDPYAV 148


>gi|218688476|ref|YP_002396688.1| putative metalloprotease [Escherichia coli ED1a]
 gi|254807366|sp|B7MPH5|RRMF_ECO81 RecName: Full=Probable rRNA maturation factor YbeY
 gi|218426040|emb|CAR06857.1| putative metal-dependent hydrolase [Escherichia coli ED1a]
          Length = 155

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+     
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHC 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+++  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLIICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME +E  I+  LG  DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEAIETEIMLALGYEDPY 150


>gi|238897293|ref|YP_002922970.1| putative metal-dependent hydrolase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259585969|sp|C4K8I5|RRMF_HAMD5 RecName: Full=Probable rRNA maturation factor
 gi|229465048|gb|ACQ66822.1| putative metal-dependent hydrolase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 151

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D      LNF+YR IDKPTNVLSFP  F S       +LGD+++  +I+E EA
Sbjct: 40  EVTIRLVDEIESRQLNFQYRQIDKPTNVLSFP--FISPVQVPLPLLGDLIICRQIVEKEA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            +  K    H  H+++HG LHLLGYDH+ + DA  ME +E  I+  LG  +PY+
Sbjct: 98  VLQKKALWAHWAHMVVHGALHLLGYDHILNDDAKKMESIETEIMMYLGYPNPYD 151


>gi|254496479|ref|ZP_05109355.1| metal dependent hydrolase [Legionella drancourtii LLAP12]
 gi|254354296|gb|EET12955.1| metal dependent hydrolase [Legionella drancourtii LLAP12]
          Length = 158

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 3/132 (2%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           V++L  + Y  K    EL++ F +   I  LN  YR  +KPTNVL+FP+           
Sbjct: 25  VASLALRDYQKK---AELTVRFVNHEEITYLNNTYRKKNKPTNVLAFPSELPLEIQLECP 81

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGD+++  +++  E+N L K  E H   ++IHG LHLLGYDH+ D+DA VM+ +E  +L
Sbjct: 82  LLGDVIICPDVLLAESNELNKTLEAHWSLILIHGILHLLGYDHIKDEDAAVMQSIEIKLL 141

Query: 160 EDLGINDPYEVD 171
            +LG  +PY+ +
Sbjct: 142 AELGYANPYDAE 153


>gi|15893065|ref|NP_360779.1| putative metalloprotease [Rickettsia conorii str. Malish 7]
 gi|238650628|ref|YP_002916480.1| putative metalloprotease [Rickettsia peacockii str. Rustic]
 gi|26006916|sp|Q92GI1|RRMF_RICCN RecName: Full=Probable rRNA maturation factor
 gi|259646950|sp|C4K1I1|RRMF_RICPU RecName: Full=Probable rRNA maturation factor
 gi|15620268|gb|AAL03680.1| unknown [Rickettsia conorii str. Malish 7]
 gi|238624726|gb|ACR47432.1| putative metalloprotease [Rickettsia peacockii str. Rustic]
          Length = 167

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K    ELS++ T++  I TLN ++R I+K TNVLSFP+   +     S          
Sbjct: 38  FSKIKQFELSILLTNAAEILTLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDY 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 98  MHLGDIAFCYEVIYNESCEQHKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI  PY
Sbjct: 158 LSYFGIFPPY 167


>gi|328675995|gb|AEB28670.1| hypothetical protein FN3523_0813 [Francisella cf. novicida 3523]
          Length = 162

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----CSS 98
           L++  + +    V +++V  D   I+ +N ++R  DKPTN++SF   F    G     + 
Sbjct: 28  LVADKHNISHAEVNVNIVSND--EIQQINKQFRNKDKPTNIISF--EFEKPQGLPEDIAD 83

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA   GKE  +H  H+ IHG LHLLGYDH DD++A VME LE  +
Sbjct: 84  DFLGDIVIAPAVLEKEAKEQGKELNHHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQL 143

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 144 LAQLGIANPY 153


>gi|87119368|ref|ZP_01075266.1| hypothetical protein MED121_13900 [Marinomonas sp. MED121]
 gi|86165759|gb|EAQ67026.1| hypothetical protein MED121_13900 [Marinomonas sp. MED121]
          Length = 154

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++   D    + LN +YRG DK TNVLSFP  F   DG    +LGD+V+  +++E EA
Sbjct: 40  ELTVRIVDEEESQNLNHQYRGKDKSTNVLSFP--FEVPDGIELPLLGDLVICRQVVEKEA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K+  +H  H++IHG LHL G+DH+ + DA  ME LE SIL  L I +PY
Sbjct: 98  VEQNKKLFHHWAHMVIHGTLHLRGFDHIKEDDAQEMESLEISILGQLDIPNPY 150


>gi|117622868|ref|YP_851781.1| putative metalloprotease [Escherichia coli APEC O1]
 gi|145558845|sp|A1A8S7|RRMF_ECOK1 RecName: Full=Probable rRNA maturation factor YbeY
 gi|115511992|gb|ABJ00067.1| putative metal-dependent hydrolase [Escherichia coli APEC O1]
          Length = 155

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +          F +E+  E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ----------FQEES--EVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  ME LE  I+  L   DPY
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALDYEDPY 150


>gi|312963221|ref|ZP_07777705.1| metalloprotease [Pseudomonas fluorescens WH6]
 gi|311282487|gb|EFQ61084.1| metalloprotease [Pseudomonas fluorescens WH6]
          Length = 152

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++   D      LN  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA
Sbjct: 36  ELTIRLVDEPEGRELNRTWRQKDYATNVLSFP-ADVPDELLDIPLLGDLVICVAVVEREA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              GK  E H  HL+IHG LHLLGYDH+DD +A  ME LER++L +LG  DPY  D
Sbjct: 95  KEQGKALEAHWAHLVIHGCLHLLGYDHIDDDEAEEMEALERTLLAELGHPDPYADD 150


>gi|226943046|ref|YP_002798119.1| putative metalloprotease [Azotobacter vinelandii DJ]
 gi|259710170|sp|C1DMW4|RRMF_AZOVD RecName: Full=Probable rRNA maturation factor
 gi|226717973|gb|ACO77144.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 162

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 16/162 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A    L   E   R  CE+   +  ++             EL++   D      L
Sbjct: 4   LDLQVASVRPLPA-EDDFRRWCELALRQRSAD------------SELTIRLVDEEEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           N  +R  D PTNVLSFP      +G   + +LGD+V+   ++E EA    K  + H  HL
Sbjct: 51  NRTWRHKDYPTNVLSFPAEV--PEGLLDIPLLGDLVICVPVVEREAAEQDKAADAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D +A  ME LER +L +LG  DPY+ D
Sbjct: 109 VIHGCLHLLGYDHIEDAEAEEMESLERDLLAELGYPDPYDGD 150


>gi|119775709|ref|YP_928449.1| putative metalloprotease [Shewanella amazonensis SB2B]
 gi|145572772|sp|A1S8S3|RRMF_SHEAM RecName: Full=Probable rRNA maturation factor
 gi|119768209|gb|ABM00780.1| protein of unknown function UPF0054 [Shewanella amazonensis SB2B]
          Length = 153

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 83/159 (52%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ AV       E    T   V     +               EL++   D+   + L
Sbjct: 7   LDLQFAVNPGNLPTEAEFETWVRVALGDTLDE------------AELTIRIVDATESQQL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NRDYRGKDKPTNVLSFP--FEAPPGMELPLLGDLVICASVVENEALEQHKALEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH+DD +A  ME LE ++L  LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIDDAEAEEMEALETTLLTGLGYPDPYK 151


>gi|84502866|ref|ZP_01000979.1| hypothetical protein OB2597_14786 [Oceanicola batsensis HTCC2597]
 gi|84388849|gb|EAQ01719.1| hypothetical protein OB2597_14786 [Oceanicola batsensis HTCC2597]
          Length = 164

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 10/123 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM----------LGDIV 105
           E+SL+  D  RI  LN ++RG   PTNVLS+P+   +++    +           LGDI 
Sbjct: 41  EISLLACDDARIAALNGDFRGRRAPTNVLSWPSEERAAEAPGQVPTPPDPDGDPELGDIA 100

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A+E  + EA   G+   +H+ HLI+H  LHLLGYDH  D DA +MEG E  IL  +G+ 
Sbjct: 101 IAFETCDREAREAGRPMADHVTHLIVHATLHLLGYDHESDLDATLMEGSEVEILGKMGLP 160

Query: 166 DPY 168
           +PY
Sbjct: 161 NPY 163


>gi|254516560|ref|ZP_05128619.1| putative metalloprotease H16_A0526 [gamma proteobacterium NOR5-3]
 gi|219674983|gb|EED31350.1| putative metalloprotease H16_A0526 [gamma proteobacterium NOR5-3]
          Length = 163

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 2/116 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E +L   D+  ++ LN +YRG D+PTNVLSFP    +    +  +LGDIV+   +++ EA
Sbjct: 40  EAALRIVDAKEMQQLNAQYRGKDRPTNVLSFPADLPAD--VTLDLLGDIVICAPVVQEEA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              GK    H  H++IHG LHLLG+DH  D +A  ME LE   L  LG   PY+ D
Sbjct: 98  ATQGKPLAAHWDHMLIHGVLHLLGFDHESDAEATHMELLETQALATLGWPCPYQAD 153


>gi|254787741|ref|YP_003075170.1| hypothetical protein TERTU_3876 [Teredinibacter turnerae T7901]
 gi|237685656|gb|ACR12920.1| conserved hypothetical protein TIGR00043 [Teredinibacter turnerae
           T7901]
          Length = 155

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 80/162 (49%), Gaps = 13/162 (8%)

Query: 10  RLDLQIA--VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +LD Q A  VE +   DE  L +    VFA           F + NI    +   D    
Sbjct: 4   QLDFQNASTVETSAMPDERDLLSWLNAVFAS------QPATFTEPNIC---VRIVDEGES 54

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           E LN  YRG   PTNVLSFP       G    +LGD+V+  +++  EA    K    H  
Sbjct: 55  EELNSTYRGKHSPTNVLSFPADLPP--GVDIELLGDLVICAQVVAREAEEQAKAPAAHWA 112

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           H+++HG LHLLGYDH++D +A  ME LE  IL+ L    PYE
Sbjct: 113 HMVVHGCLHLLGYDHIEDDEADAMEALETKILQALDFPPPYE 154


>gi|157964881|ref|YP_001499705.1| putative metalloprotease [Rickettsia massiliae MTU5]
 gi|157844657|gb|ABV85158.1| Putative metal-dependent hydrolase [Rickettsia massiliae MTU5]
          Length = 177

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K    ELS++ T+   I TLN ++R I+K TNVLSFP+   +     S          
Sbjct: 48  FSKIKQCELSILLTNVAEILTLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDY 107

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 108 MHLGDIAFCYEVIYNESCEQQKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEI 167

Query: 159 LEDLGINDPY 168
           L   GI  PY
Sbjct: 168 LSYFGIFSPY 177


>gi|149192274|ref|ZP_01870486.1| hypothetical protein VSAK1_11415 [Vibrio shilonii AK1]
 gi|148833889|gb|EDL50914.1| hypothetical protein VSAK1_11415 [Vibrio shilonii AK1]
          Length = 154

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIAVE+     E  L +      A      + K     +   EL++   D    + 
Sbjct: 4   ELDLQIAVES-----EQGLPS------ADEFQGWLDKTITPFQQDAELTIRIVDEEESQQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNRDYRGKDKPTNVLSFP--FEAPPGVEMDLLGDMIICRQVVEKEAIEQSKPLIAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I+ D+G +DPY V+
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLDMGFDDPYLVE 152


>gi|34581258|ref|ZP_00142738.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28262643|gb|EAA26147.1| unknown [Rickettsia sibirica 246]
          Length = 167

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K    ELS++ T++  I TLN ++R I+K TNVLSFP+   +     S          
Sbjct: 38  FSKIKQFELSILLTNAAEILTLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDY 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 98  MHLGDIAFCYEVIYNESCEQHKTFENHFIHLLIHSILHLIGFDHQNDTEANIMEDLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI  PY
Sbjct: 158 LSYFGIFPPY 167


>gi|134302076|ref|YP_001122045.1| hypothetical protein FTW_1112 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|166228884|sp|A4IYC3|RRMF_FRATW RecName: Full=Probable rRNA maturation factor
 gi|134049853|gb|ABO46924.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 162

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 28  LVADKHHISHAEVNLNIVSND--EIQQINKQFRNKDKPTNIISFKFEKPQGLP--DDIAN 83

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGY+H DD++A VME LE  +
Sbjct: 84  DFLGDIVIAPAVLENEAKEQNKELNDHWQHIFIHGLLHLLGYNHQDDQEAEVMENLEIQL 143

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 144 LAQLGIANPY 153


>gi|254450088|ref|ZP_05063525.1| conserved hypothetical protein TIGR00043 [Octadecabacter
           antarcticus 238]
 gi|198264494|gb|EDY88764.1| conserved hypothetical protein TIGR00043 [Octadecabacter
           antarcticus 238]
          Length = 156

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 75/133 (56%), Gaps = 10/133 (7%)

Query: 46  KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCSSLM--- 100
            G  ++    E+SL+  D  RI  LN ++R    PTNVLS+P+    A +DG   +    
Sbjct: 23  SGVGLEAAAFEISLLACDDARICVLNADFRQKGTPTNVLSWPSNERGAEADGDMPVQPQL 82

Query: 101 -----LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                LGDI ++Y+    EA   G  F +H+ HLI+HG LHLLG+DH+ D D  +MEGLE
Sbjct: 83  PQDTELGDIAISYDTCAREAAQSGTPFADHVTHLIVHGTLHLLGFDHLRDLDGALMEGLE 142

Query: 156 RSILEDLGINDPY 168
             IL  L I DPY
Sbjct: 143 TEILGKLDIADPY 155


>gi|254467206|ref|ZP_05080617.1| conserved hypothetical protein TIGR00043 [Rhodobacterales bacterium
           Y4I]
 gi|206688114|gb|EDZ48596.1| conserved hypothetical protein TIGR00043 [Rhodobacterales bacterium
           Y4I]
          Length = 170

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 12/136 (8%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCSS------- 98
           + +   + E+SL+  D   I  LN E+R    PTNVLS+P     A +DG +        
Sbjct: 32  FGLDAEMCEISLLGCDDAEIAGLNAEFREKPVPTNVLSWPAEERAADTDGGTPVPPEPDF 91

Query: 99  ---LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
              + LGDI ++Y     EA+  G+   +H  HLI+HG LHLLGYDH+ D+DA +MEG+E
Sbjct: 92  TGEIPLGDIAISYGTCAREASEAGRTLADHARHLIVHGTLHLLGYDHIRDRDAALMEGIE 151

Query: 156 RSILEDLGINDPYEVD 171
             IL  +GI +PY V+
Sbjct: 152 VLILGKMGIANPYIVE 167


>gi|157826441|ref|YP_001495505.1| putative metalloprotease [Rickettsia bellii OSU 85-389]
 gi|166229380|sp|A8GUH2|RRMF_RICB8 RecName: Full=Probable rRNA maturation factor
 gi|157801745|gb|ABV78468.1| hypothetical protein A1I_00310 [Rickettsia bellii OSU 85-389]
          Length = 183

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 22/135 (16%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------AFASSDGCSS--------- 98
           ELS++ T++  I TLN ++R I+K TNVLSFP          F+ ++  SS         
Sbjct: 45  ELSILLTNNEEILTLNKQFRNIEKATNVLSFPANELNWQDLRFSGNEIASSNKPIILENL 104

Query: 99  -----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                + LGDI   Y++I  E+    K FENH +HL+IH  LHL+G+DH +D +  +ME 
Sbjct: 105 GDSDYMHLGDIAFCYDVIYNESYEQQKTFENHFIHLLIHSILHLIGFDHQNDTETKIMEN 164

Query: 154 LERSILEDLGINDPY 168
           LE  IL   GI+ PY
Sbjct: 165 LEIEILAHFGISSPY 179


>gi|157146731|ref|YP_001454050.1| putative metalloprotease [Citrobacter koseri ATCC BAA-895]
 gi|166228386|sp|A8AJF1|RRMF_CITK8 RecName: Full=Probable rRNA maturation factor
 gi|157083936|gb|ABV13614.1| hypothetical protein CKO_02504 [Citrobacter koseri ATCC BAA-895]
          Length = 155

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 89/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E+       H     E  F   ++ +I +  F +E+ V + LV  D      L
Sbjct: 6   LDLQLACED-------HSGLPEESQFQTWLNAVIPQ--FQEESEVTIRLV--DEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGMEMPLLGDLIICRQVVEQEAKEQDKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|317047310|ref|YP_004114958.1| hypothetical protein Pat9b_1080 [Pantoea sp. At-9b]
 gi|316948927|gb|ADU68402.1| protein of unknown function UPF0054 [Pantoea sp. At-9b]
          Length = 157

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A   +    E       E  F + +   ++   F  E+ V + LV  D      L
Sbjct: 6   LDLQLACAESQGLPE-------EAAFQRWLEAAVTP--FQPESEVTIRLV--DEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAVEQGKSLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGTLHLLGYDHIEDDEAEEMEALETEIMLALGYPDPY 150


>gi|83648012|ref|YP_436447.1| metal-dependent hydrolase [Hahella chejuensis KCTC 2396]
 gi|123531265|sp|Q2SBF2|RRMF_HAHCH RecName: Full=Probable rRNA maturation factor
 gi|83636055|gb|ABC32022.1| predicted metal-dependent hydrolase [Hahella chejuensis KCTC 2396]
          Length = 156

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 85/158 (53%), Gaps = 15/158 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+QIA E A    E  L     +++A+A           +    E+++   D+     L
Sbjct: 5   VDIQIASEEADLPSEEQL-----ILWAQAA--------LRETGDREVTIRIVDAEESREL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G +  +LGD+V+   ++  EA    K    H  H++
Sbjct: 52  NAQYRGKDKPTNVLSFP--FENPPGLTLPLLGDLVICAPVVFNEAVEQQKTAAAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHL GYDH+ D++A VME LE  ++  LG   PY
Sbjct: 110 IHGMLHLQGYDHIIDEEAEVMESLETELVTSLGFPPPY 147


>gi|238762865|ref|ZP_04623833.1| metalloprotease [Yersinia kristensenii ATCC 33638]
 gi|238698876|gb|EEP91625.1| metalloprotease [Yersinia kristensenii ATCC 33638]
          Length = 130

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 2/117 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E+++   D      LN  YRG DKPTNVLSFP  F +       +LGD+++  +++
Sbjct: 9   QEVSEVTIRVVDEAESHELNLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVV 66

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I+++LG  DPY
Sbjct: 67  EQEAVEQEKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQNLGYPDPY 123


>gi|123443202|ref|YP_001007176.1| putative metalloprotease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160872|ref|YP_004297449.1| putative metalloprotease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|145572776|sp|A1JQ74|RRMF_YERE8 RecName: Full=Probable rRNA maturation factor
 gi|122090163|emb|CAL13026.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318604775|emb|CBY26273.1| metal-dependent hydrolase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665102|gb|ADZ41746.1| putative metalloprotease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863404|emb|CBX73526.1| putative metalloprotease YE2987 [Yersinia enterocolitica W22703]
          Length = 157

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 2/117 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E+++   D      LN  YRG DKPTNVLSFP  F +       +LGD+++  +++
Sbjct: 36  QEVSEVTIRVVDEAESHELNLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVV 93

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 94  EQEAVEQEKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 150


>gi|332993748|gb|AEF03803.1| hypothetical protein ambt_11410 [Alteromonas sp. SN2]
          Length = 155

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/141 (45%), Positives = 82/141 (58%), Gaps = 9/141 (6%)

Query: 36  FAKAVSNL-----ISKGYFVKENI--VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
            AKA+ +L      +    V EN    E+++ FTD    +TLN EYRG DKPTNVLSFP 
Sbjct: 17  MAKAIPSLEQIEAWANAVLVAENTGEQEITVRFTDDEESQTLNHEYRGKDKPTNVLSFP- 75

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            F    G    +LGD+V+   +I  EA    K   NH  H+++HG LHLLGYDH+DD DA
Sbjct: 76  -FEVPPGIEMNLLGDLVICVPVIMREAEEQDKTPTNHYAHMVVHGILHLLGYDHIDDADA 134

Query: 149 CVMEGLERSILEDLGINDPYE 169
            +ME  E  IL  L I +PY+
Sbjct: 135 DIMEAKEIRILASLNIGNPYQ 155


>gi|329897208|ref|ZP_08271948.1| heat shock protein involved in translation [gamma proteobacterium
           IMCC3088]
 gi|328921363|gb|EGG28757.1| heat shock protein involved in translation [gamma proteobacterium
           IMCC3088]
          Length = 157

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 11/158 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ + V+ A  GD        +  F + VS  +      K   V+L +V  DS+ I+ L
Sbjct: 1   MNISVCVDRACGGDSPD-----DDSFRRWVSAALKACR--KSGHVDLKIV--DSNEIQYL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D  TNVLSFP+      G  S +LGD+ L   +IE EA+   K   +H  HL 
Sbjct: 52  NKTYRGKDAATNVLSFPSELPP--GIPSDLLGDLALCTPVIEREASEQRKVLMHHWAHLT 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHL+G+DH++D DA +ME LE  IL  L + +PY
Sbjct: 110 IHGTLHLIGFDHIEDTDAEIMESLEIDILASLSLPNPY 147


>gi|326386703|ref|ZP_08208324.1| hypothetical protein Y88_2596 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208756|gb|EGD59552.1| hypothetical protein Y88_2596 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 164

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 70/121 (57%), Gaps = 11/121 (9%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVLAY 108
           +SLV  D   +  LN ++R  DKPTNVLSFP        +A  + D  +  MLGD++LA+
Sbjct: 45  VSLVLADDEEVHELNKQWRAKDKPTNVLSFPMLSREEVLSAAEAPDAPA--MLGDLILAH 102

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDP 167
            +   EA   G   + H  HLI+HG LHL GYDH   + DA  MEGLER  L  LGI DP
Sbjct: 103 GVCAREAVEKGVTQDAHTSHLIVHGLLHLAGYDHETGEADAEEMEGLERKALALLGIADP 162

Query: 168 Y 168
           Y
Sbjct: 163 Y 163


>gi|300024988|ref|YP_003757599.1| hypothetical protein Hden_3487 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526809|gb|ADJ25278.1| protein of unknown function UPF0054 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 171

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 4/112 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +++  +    +E LN ++RG  KPTNVLSFP    + +G     +GD++LA E +  EA+
Sbjct: 54  VAVALSSDASVEVLNGQFRGKPKPTNVLSFP----AGEGAPDDFIGDVILAAETVRREAD 109

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             G   E+HL HL++HG LHL G+DH+   +A  ME +E SIL  LG+ +PY
Sbjct: 110 EQGVSPEHHLQHLVVHGILHLFGFDHMSADEAEHMEAIEISILSKLGVANPY 161


>gi|71733514|ref|YP_276505.1| metalloprotease [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|123635049|sp|Q48DN6|RRMF_PSE14 RecName: Full=Probable rRNA maturation factor
 gi|71554067|gb|AAZ33278.1| conserved hypothetical protein TIGR00043 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320322686|gb|EFW78779.1| putative metalloprotease [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330529|gb|EFW86508.1| putative metalloprotease [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330873683|gb|EGH07832.1| metal-binding heat shock protein [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 166

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 88/161 (54%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E +   DE   R  CE+            G   +    EL++   D +    L
Sbjct: 4   LDLQIASETSA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDENEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A A  D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADAPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYAED 150


>gi|187931464|ref|YP_001891448.1| hypothetical protein FTM_0691 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691552|sp|B2SG11|RRMF_FRATM RecName: Full=Probable rRNA maturation factor
 gi|187712373|gb|ACD30670.1| conserved hypothetical protein, putative [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 162

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 77/130 (59%), Gaps = 8/130 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----PTAFASSDGCSS 98
           L++  + +    V L++V  D   I+ +N ++R  DKPTN++SF    P      D  ++
Sbjct: 28  LVADKHHISHAEVNLNIVSND--EIQQINKQFRNKDKPTNIISFEFEKPQGLP--DDIAN 83

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV+A  ++E EA    KE  +H  H+ IHG LHLLGYDH  D++A VME LE  +
Sbjct: 84  DFLGDIVIAPAVLENEAKEQNKELNDHWQHIFIHGLLHLLGYDHQGDQEAEVMENLEIQL 143

Query: 159 LEDLGINDPY 168
           L  LGI +PY
Sbjct: 144 LAQLGIANPY 153


>gi|302381346|ref|YP_003817169.1| hypothetical protein Bresu_0231 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191974|gb|ADK99545.1| protein of unknown function UPF0054 [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 153

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 67/110 (60%), Gaps = 1/110 (0%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++ TD   +  LN  +RG D+PTNVLSFP A     G     LGDIVLAY +   EA   
Sbjct: 39  VLLTDDATVRDLNARFRGKDRPTNVLSFPAADMPDTG-GPRPLGDIVLAYGVCAGEATAQ 97

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           GK    HL HL++HG LHLLG DH D+ +A  ME  ER+IL  LG+ DPY
Sbjct: 98  GKTLTGHLTHLVVHGVLHLLGRDHEDEAEAETMEAEERTILARLGVADPY 147


>gi|158421634|ref|YP_001522926.1| hypothetical protein AZC_0010 [Azorhizobium caulinodans ORS 571]
 gi|172048013|sp|A8IG05|RRMF_AZOC5 RecName: Full=Probable rRNA maturation factor
 gi|158328523|dbj|BAF86008.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
          Length = 159

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+S+  TD  RI  LN E+R  DKPTNVLSFP A    +G     LGD+++A E +  E
Sbjct: 41  AEMSITLTDDARIRVLNREWRDKDKPTNVLSFPAA-ELPEGVVPQPLGDVIVARETVFSE 99

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K   +HL HL++HG LHL+G+DH DD +A  ME  ER IL  LGI+DPY
Sbjct: 100 ALAEDKTPAHHLAHLVVHGTLHLMGFDHEDDDEAEEMEAAERQILAGLGIDDPY 153


>gi|71902417|ref|ZP_00684373.1| Protein of unknown function UPF0054 [Xylella fastidiosa Ann-1]
 gi|71727855|gb|EAO30096.1| Protein of unknown function UPF0054 [Xylella fastidiosa Ann-1]
          Length = 213

 Score = 97.1 bits (240), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 75/163 (46%), Gaps = 23/163 (14%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           LPR  L  AV    W              A  +   I K         +L++   D    
Sbjct: 68  LPRTKLPAAVSFRKW-------------VAATLQGRIRKA--------DLAIRIVDEKEG 106

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
             LN+ YR  D  TNVLSFP              +LGDIV+   +I  EA   GK    H
Sbjct: 107 RALNYHYRNKDYATNVLSFPAQLPEPFPKALKIPLLGDIVMCAPVIAREATEQGKSLSAH 166

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL +HG LHLLG++H D ++A  ME LER IL +LGI+DPY
Sbjct: 167 YAHLTVHGTLHLLGWNHEDHQEADAMEQLEREILANLGISDPY 209


>gi|71276466|ref|ZP_00652742.1| Protein of unknown function UPF0054 [Xylella fastidiosa Dixon]
 gi|71898875|ref|ZP_00681042.1| Protein of unknown function UPF0054 [Xylella fastidiosa Ann-1]
 gi|71162782|gb|EAO12508.1| Protein of unknown function UPF0054 [Xylella fastidiosa Dixon]
 gi|71731287|gb|EAO33351.1| Protein of unknown function UPF0054 [Xylella fastidiosa Ann-1]
          Length = 213

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 75/163 (46%), Gaps = 23/163 (14%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           LPR  L  AV    W              A  +   I K         +L++   D    
Sbjct: 68  LPRTKLPAAVSFRKW-------------VAATLQGRIRKA--------DLAIRIVDEKEG 106

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
             LN+ YR  D  TNVLSFP              +LGDIV+   +I  EA   GK    H
Sbjct: 107 RALNYHYRNKDYATNVLSFPAQLPEPFPKALKIPLLGDIVMCAPVIAREATEQGKSLSAH 166

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL +HG LHLLG++H D ++A  ME LER IL +LGI+DPY
Sbjct: 167 YAHLTVHGTLHLLGWNHEDHQEADAMEQLEREILANLGISDPY 209


>gi|16124310|ref|NP_418874.1| hypothetical protein CC_0054 [Caulobacter crescentus CB15]
 gi|221232991|ref|YP_002515427.1| metal-dependent hydrolase [Caulobacter crescentus NA1000]
 gi|26006909|sp|Q9AC14|RRMF_CAUCR RecName: Full=Probable rRNA maturation factor
 gi|254799469|sp|B8GX09|RRMF_CAUCN RecName: Full=Probable rRNA maturation factor
 gi|13421148|gb|AAK22042.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220962163|gb|ACL93519.1| predicted metal-dependent hydrolase [Caulobacter crescentus NA1000]
          Length = 157

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 5/113 (4%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++ TD   ++ LN ++R  D  TNVLSFP+   + +G     +GDI LAY +   EA   
Sbjct: 46  ILLTDDDSVQALNRDFRKKDYATNVLSFPSP-PNPEG----QIGDIALAYGVCAREAAEQ 100

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +HL HL+ HG LHLLGYDH  D +A  ME LER IL  L + DPY  D
Sbjct: 101 GKPLAHHLQHLVAHGVLHLLGYDHERDDEAEAMEALEREILAGLDVPDPYASD 153


>gi|165933701|ref|YP_001650490.1| metal-binding heat shock protein [Rickettsia rickettsii str. Iowa]
 gi|189038666|sp|B0BV24|RRMF_RICRO RecName: Full=Probable rRNA maturation factor
 gi|165908788|gb|ABY73084.1| hypothetical metal-binding protein [Rickettsia rickettsii str.
           Iowa]
          Length = 167

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K    ELS++ T++  I  LN ++R I+K TNVLSFP+   +     S          
Sbjct: 38  FSKIKQFELSILLTNAAEILILNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDY 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 98  MHLGDIAFCYEVIYNESCEQHKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI  PY
Sbjct: 158 LSYFGIFPPY 167


>gi|71892097|ref|YP_277827.1| hypothetical protein BPEN_324 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|123641012|sp|Q492Z0|RRMF_BLOPB RecName: Full=Probable rRNA maturation factor
 gi|71796203|gb|AAZ40954.1| conserved hypothetical protein [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 157

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 13/153 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQ+A +N           L  +   K   + +S  + + +  +EL++   D   +  L
Sbjct: 8   IDLQLACKN-----------LHGLPNRKMFQSWVSAIFSIYKKKIELTVRIVDIKEMHYL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N+ Y   D PTNVLSFP  F    G  S +LGD+VL  +IIE E+        +H  H+I
Sbjct: 57  NWYYLKKDCPTNVLSFP--FTPPLGMKSPLLGDVVLCRQIIEYESKEKNVPGRSHWAHMI 114

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           IHG LHLLGY+H+ DK+A +M+ +ER+IL+  G
Sbjct: 115 IHGSLHLLGYNHIVDKEAILMQRVERNILQKCG 147


>gi|28199652|ref|NP_779966.1| putative metalloprotease [Xylella fastidiosa Temecula1]
 gi|170731019|ref|YP_001776452.1| putative metalloprotease [Xylella fastidiosa M12]
 gi|182682398|ref|YP_001830558.1| putative metalloprotease [Xylella fastidiosa M23]
 gi|32130366|sp|Q87AP2|RRMF_XYLFT RecName: Full=Probable rRNA maturation factor
 gi|238687948|sp|B0U4P3|RRMF_XYLFM RecName: Full=Probable rRNA maturation factor
 gi|238691098|sp|B2I8U3|RRMF_XYLF2 RecName: Full=Probable rRNA maturation factor
 gi|28057767|gb|AAO29615.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
 gi|167965812|gb|ACA12822.1| conserved hypothetical protein [Xylella fastidiosa M12]
 gi|182632508|gb|ACB93284.1| protein of unknown function UPF0054 [Xylella fastidiosa M23]
 gi|307578678|gb|ADN62647.1| putative metalloprotease [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 161

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 64/116 (55%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D      LN+ YR  D  TNVLSFP              +LGDIV+   +I 
Sbjct: 42  ADLAIRIVDEKEGRALNYHYRNKDYATNVLSFPAQLPEPFPKALKIPLLGDIVMCAPVIA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG++H D ++A  ME LER IL +LGI+DPY
Sbjct: 102 REATEQGKSLSAHYAHLTVHGTLHLLGWNHEDHQEADAMEQLEREILANLGISDPY 157


>gi|52841670|ref|YP_095469.1| metal dependent hydrolase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54294525|ref|YP_126940.1| hypothetical protein lpl1601 [Legionella pneumophila str. Lens]
 gi|54297350|ref|YP_123719.1| hypothetical protein lpp1395 [Legionella pneumophila str. Paris]
 gi|148358971|ref|YP_001250178.1| metal dependent hydrolase [Legionella pneumophila str. Corby]
 gi|296107020|ref|YP_003618720.1| Predicted metal-dependent hydrolase [Legionella pneumophila 2300/99
           Alcoy]
 gi|59799081|sp|Q5WW59|RRMF_LEGPL RecName: Full=Probable rRNA maturation factor
 gi|59799082|sp|Q5X5C5|RRMF_LEGPA RecName: Full=Probable rRNA maturation factor
 gi|59799085|sp|Q5ZVK0|RRMF_LEGPH RecName: Full=Probable rRNA maturation factor
 gi|166235104|sp|A5IBT2|RRMF_LEGPC RecName: Full=Probable rRNA maturation factor
 gi|52628781|gb|AAU27522.1| metal dependent hydrolase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53751135|emb|CAH12546.1| hypothetical protein lpp1395 [Legionella pneumophila str. Paris]
 gi|53754357|emb|CAH15841.1| hypothetical protein lpl1601 [Legionella pneumophila str. Lens]
 gi|148280744|gb|ABQ54832.1| metal dependent hydrolase [Legionella pneumophila str. Corby]
 gi|295648921|gb|ADG24768.1| Predicted metal-dependent hydrolase [Legionella pneumophila 2300/99
           Alcoy]
          Length = 158

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 71/117 (60%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++   D   +  LN  YR  +KPTNVL+FP +  ++      +LGD+V+  E++  E
Sbjct: 37  AELTVRLVDVEEMTYLNHTYRKKNKPTNVLAFPCSLPANIELECPLLGDVVICPEVLLAE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +    K    H   ++IHG LHLLGYDH+ D++A +M+ LE  +L +LG  +PYEV+
Sbjct: 97  SAQFNKSLHAHWSLILIHGVLHLLGYDHIKDEEASIMQMLEAKLLAELGYANPYEVE 153


>gi|312797210|ref|YP_004030132.1| hypothetical protein [Burkholderia rhizoxinica HKI 454]
 gi|312168985|emb|CBW75988.1| Hypothetical metal-binding protein [Burkholderia rhizoxinica HKI
           454]
          Length = 157

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 4/114 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++ F D      LN  YRG D PTNVL+F  A+  SD  +  + GD+VL   ++E E
Sbjct: 44  AELTIRFVDEQEGRALNRSYRGKDYPTNVLTF--AYGESD--NEPVSGDLVLCCPVVESE 99

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K  + H  HLI+HG LH  GYDH DD+ A  ME +E  IL  LG  DPY
Sbjct: 100 AREQHKPLDAHYAHLIVHGVLHAQGYDHEDDEQAREMESIETDILARLGYPDPY 153


>gi|241662039|ref|YP_002980399.1| unkown domain/ metalloprotease fusion protein [Ralstonia pickettii
           12D]
 gi|240864066|gb|ACS61727.1| protein of unknown function UPF0054 [Ralstonia pickettii 12D]
          Length = 270

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 74/147 (50%), Gaps = 7/147 (4%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           +GDE+       +   + +   I+   F      +L++ F       TLN  YRG D  T
Sbjct: 128 YGDELKAAARKALPKERDIEAWIAPALFAD---AQLNVRFVGEEEGRTLNRTYRGKDYAT 184

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           NVL+F  A ++ D  S+    DIVL   ++E EA    K    H  HLI+HG LH  GYD
Sbjct: 185 NVLTFSYAESAEDPVSA----DIVLCCAVVEKEAKEQKKPLTAHYAHLIVHGALHAQGYD 240

Query: 142 HVDDKDACVMEGLERSILEDLGINDPY 168
           H D  DA  MEG+E  IL DLG  DPY
Sbjct: 241 HEDAADAKEMEGIETEILRDLGFADPY 267


>gi|157828976|ref|YP_001495218.1| putative metalloprotease [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166228797|sp|A8GTI5|RRMF_RICRS RecName: Full=Probable rRNA maturation factor
 gi|157801457|gb|ABV76710.1| hypothetical protein A1G_06285 [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 167

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 10/130 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------- 98
           F K    ELS++ T++  I  LN ++R I+K TNVLSFP+   +     S          
Sbjct: 38  FSKIKQFELSILLTNAAEILILNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDY 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           + LGDI   YE+I  E+    K FENH +HL+IH  LHL+G+DH +D +A +ME LE  I
Sbjct: 98  MHLGDIAFCYEVIYNESCEQYKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEI 157

Query: 159 LEDLGINDPY 168
           L   GI  PY
Sbjct: 158 LSYFGIFPPY 167


>gi|15599177|ref|NP_252671.1| metalloprotease [Pseudomonas aeruginosa PAO1]
 gi|107103500|ref|ZP_01367418.1| hypothetical protein PaerPA_01004570 [Pseudomonas aeruginosa PACS2]
 gi|116052021|ref|YP_789136.1| putative metalloprotease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254236875|ref|ZP_04930198.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254242668|ref|ZP_04935990.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296387490|ref|ZP_06876965.1| putative metalloprotease [Pseudomonas aeruginosa PAb1]
 gi|313109422|ref|ZP_07795382.1| hypothetical protein PA39016_001790022 [Pseudomonas aeruginosa
           39016]
 gi|26006910|sp|Q9HX37|RRMF_PSEAE RecName: Full=Probable rRNA maturation factor
 gi|122261168|sp|Q02SF0|RRMF_PSEAB RecName: Full=Probable rRNA maturation factor
 gi|9950173|gb|AAG07369.1|AE004816_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115587242|gb|ABJ13257.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168806|gb|EAZ54317.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126196046|gb|EAZ60109.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|310881884|gb|EFQ40478.1| hypothetical protein PA39016_001790022 [Pseudomonas aeruginosa
           39016]
          Length = 160

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 79/161 (49%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A        E   R  CE+   +   +             EL++   D      L
Sbjct: 5   LDLQVASAAPDLPSEAQFRAWCELALRQRPES-------------ELTIRLVDEAEGLEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D  TNVLSFP A    +     +LGD+V+   ++  EA    K  + H  HL+
Sbjct: 52  NSTYRHKDYATNVLSFP-ADVPDELLDIPLLGDLVICAPVVAREALEQRKPLQAHWAHLV 110

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 111 IHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 151


>gi|238791655|ref|ZP_04635293.1| metalloprotease [Yersinia intermedia ATCC 29909]
 gi|238729271|gb|EEQ20787.1| metalloprotease [Yersinia intermedia ATCC 29909]
          Length = 120

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           + E+++   D      LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E 
Sbjct: 1   MAEVTVRLVDEAESHELNLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQ 58

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 59  EAIEQEKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 113


>gi|315497216|ref|YP_004086020.1| hypothetical protein Astex_0168 [Asticcacaulis excentricus CB 48]
 gi|315415228|gb|ADU11869.1| protein of unknown function UPF0054 [Asticcacaulis excentricus CB
           48]
          Length = 156

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 5/122 (4%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVL 106
            Y   +  ++L ++ TD   ++ LN E+R  + PTNVLSFP     +       LGDI  
Sbjct: 37  AYLGAKEQLDLVVLLTDDAEMKALNKEFRQKNAPTNVLSFP-----APDMMHPHLGDIAF 91

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
            +E    EA    K  + H+ HL +HG LHLLGYDH++D +A  ME LER IL  LGI D
Sbjct: 92  GFETCVREAKEQKKTLKAHVAHLSVHGALHLLGYDHINDPEAEEMEDLERKILHGLGIAD 151

Query: 167 PY 168
           PY
Sbjct: 152 PY 153


>gi|254437107|ref|ZP_05050601.1| conserved hypothetical protein TIGR00043 [Octadecabacter
           antarcticus 307]
 gi|198252553|gb|EDY76867.1| conserved hypothetical protein TIGR00043 [Octadecabacter
           antarcticus 307]
          Length = 156

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 18/162 (11%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E+  W   + L TL +     A+S     G  ++ +  E+S++     RI  LN ++R 
Sbjct: 2   IEDDRW---LGLATLADRAAFAALS-----GVGLEASAFEISMLACGDTRISALNADFRQ 53

Query: 77  IDKPTNVLSFPTA--FASSDG--------CSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
               TNVLS+P++   A  DG             LGDI ++Y+ I  EA   G    +H+
Sbjct: 54  KGAATNVLSWPSSERGADVDGDMPVQPQVPQDTQLGDIAISYDTIAREAAQSGTPLVDHV 113

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            HLI+HG LHLLG+DHV D D  +MEGLE  IL  L I DPY
Sbjct: 114 THLIVHGTLHLLGFDHVRDLDGALMEGLETEILGKLDIRDPY 155


>gi|15837505|ref|NP_298193.1| putative metalloprotease [Xylella fastidiosa 9a5c]
 gi|26006920|sp|Q9PEX5|RRMF_XYLFA RecName: Full=Probable rRNA maturation factor
 gi|9105822|gb|AAF83713.1|AE003930_3 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 161

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 64/116 (55%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIE 112
            +L++   D      LN+ YR  D  TNVLSFP              +LGDIV+   +I 
Sbjct: 42  ADLAIRIVDEKEGRALNYHYRNKDYATNVLSFPAQLPEPLPKALKIPLLGDIVMCAPVIA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  HL +HG LHLLG++H D ++A  ME LER IL +LGI+DPY
Sbjct: 102 REAAEQGKSLSAHYAHLTVHGTLHLLGWNHEDHQEADAMEQLEREILANLGISDPY 157


>gi|330828615|ref|YP_004391567.1| metalloprotease [Aeromonas veronii B565]
 gi|328803751|gb|AEB48950.1| metalloprotease [Aeromonas veronii B565]
          Length = 154

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 73/114 (64%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E E
Sbjct: 38  AEVTVRIVDEAESNELNLTYRGKDKPTNVLSFP--FEAPPGLELPLLGDLVICRQVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK    H  H+++HG LHLLGYDH++D++A  ME LER I+++LG  DPY
Sbjct: 96  AEEQGKPLMAHWAHMVVHGSLHLLGYDHIEDEEAEEMEALERDIMQELGFADPY 149


>gi|114766587|ref|ZP_01445543.1| hypothetical protein 1100011001317_R2601_08751 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541203|gb|EAU44255.1| hypothetical protein R2601_08751 [Roseovarius sp. HTCC2601]
          Length = 160

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 9/121 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF--------ASSDGCSSLMLGDIVLA 107
           E++++  D  RI  LN ++R   KPTNVLS+P+             DG     LGDI +A
Sbjct: 40  EIAVLACDDARIAELNGDFRAKPKPTNVLSWPSEERDPEEPPEGGEDGMPE-ELGDIAIA 98

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
           +E    EA   GK  ++H+ HL++H  LHLLGYDH+ D +A VME LE  IL  +GI DP
Sbjct: 99  WETCAREAAEQGKPLDHHITHLMVHATLHLLGYDHISDAEATVMETLETEILGKMGIEDP 158

Query: 168 Y 168
           Y
Sbjct: 159 Y 159


>gi|160876547|ref|YP_001555863.1| putative metalloprotease [Shewanella baltica OS195]
 gi|189040143|sp|A9KZZ5|RRMF_SHEB9 RecName: Full=Probable rRNA maturation factor
 gi|160862069|gb|ABX50603.1| protein of unknown function UPF0054 [Shewanella baltica OS195]
 gi|315268741|gb|ADT95594.1| protein of unknown function UPF0054 [Shewanella baltica OS678]
          Length = 153

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 79/134 (58%), Gaps = 6/134 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           FA  V+N I        N  EL++   DS   + LN  YRG DKPTNVLSFP  F +   
Sbjct: 24  FALWVTNAIGNSM----NEAELTIRIVDSRESQMLNSTYRGKDKPTNVLSFP--FEAPPE 77

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
               +LGD+V+   ++E EA    K  E H  H+++HG LHLLGYDH++D++A  ME LE
Sbjct: 78  IELPLLGDLVICAAVVENEAREQQKTLEAHWAHMVVHGCLHLLGYDHIEDEEAEEMESLE 137

Query: 156 RSILEDLGINDPYE 169
             ++E LG  DPY+
Sbjct: 138 TQLIEGLGFTDPYK 151


>gi|54310005|ref|YP_131025.1| putative metalloprotease [Photobacterium profundum SS9]
 gi|59799114|sp|Q6LNA3|RRMF_PHOPR RecName: Full=Probable rRNA maturation factor
 gi|46914444|emb|CAG21223.1| Putative predicted metal dependent hydrolase [Photobacterium
           profundum SS9]
          Length = 154

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ A EN    + +      +  F  AV+   S          E+++   D    + L
Sbjct: 5   LDLQYATENQ---EGLPSEDKFQQWFEAAVTLFQSDA--------EITIRIVDVKESQAL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N EYRG DKPTNVLSFP  F +  G    +LGD+++  +++EIEA    K    H  H++
Sbjct: 54  NLEYRGKDKPTNVLSFP--FEAPPGIELDLLGDLIICRQVVEIEAKEQDKPLNAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D++A  ME LE  I+E +G  DP+  +
Sbjct: 112 VHGTLHLLGYDHIEDEEAEEMEYLETEIIEKMGFADPFAAE 152


>gi|304413111|ref|ZP_07394584.1| hypothetical protein REG_0098 [Candidatus Regiella insecticola
           LSR1]
 gi|304283954|gb|EFL92347.1| hypothetical protein REG_0098 [Candidatus Regiella insecticola
           LSR1]
          Length = 177

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D      LNF YR  DKPTNVLSFP+            LGD+V+  +++E EA
Sbjct: 65  EMTIRLVDEAESRQLNFIYRDKDKPTNVLSFPSTLPEEINLP--WLGDLVICRQVVEREA 122

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K    H  H+++HG LHLLGYDH+ D++A  ME LE  IL+ LG  D Y
Sbjct: 123 VEQNKTLLAHWAHMVVHGTLHLLGYDHITDEEAQEMESLETDILQTLGYPDAY 175


>gi|307610143|emb|CBW99689.1| hypothetical protein LPW_14571 [Legionella pneumophila 130b]
          Length = 158

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 70/117 (59%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++   D   +  LN  YR  +KPTNVL+FP +   +      +LGD+V+  E++  E
Sbjct: 37  AELTVRLVDVEEMTYLNHTYRKKNKPTNVLAFPCSLPENIELECPLLGDVVICPEVLLAE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +    K    H   ++IHG LHLLGYDH+ D++A +M+ LE  +L +LG  +PYEV+
Sbjct: 97  SAQFNKSLHAHWSLILIHGVLHLLGYDHIKDEEASIMQMLEAKLLAELGYANPYEVE 153


>gi|90414092|ref|ZP_01222075.1| hypothetical protein P3TCK_25855 [Photobacterium profundum 3TCK]
 gi|90324887|gb|EAS41415.1| hypothetical protein P3TCK_25855 [Photobacterium profundum 3TCK]
          Length = 154

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ A EN    + +      +  F  AV+   S          E+++   D    + L
Sbjct: 5   LDLQYATENQ---EGLPSEDEFQQWFEAAVTLFQSDA--------EITIRIVDVKESQAL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N EYRG DKPTNVLSFP  F +  G    +LGD+++  +++EIEA    K    H  H++
Sbjct: 54  NLEYRGKDKPTNVLSFP--FETPPGIELDLLGDLIICRQVVEIEAKEQDKPLNAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D++A  ME LE  I+E +G  DP+
Sbjct: 112 VHGTLHLLGYDHIEDEEAEEMESLETEIIEKMGFADPF 149


>gi|270160107|ref|ZP_06188763.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|289165115|ref|YP_003455253.1| metal-dependent hydrolase [Legionella longbeachae NSW150]
 gi|269988446|gb|EEZ94701.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|288858288|emb|CBJ12156.1| putative metal-dependent hydrolase [Legionella longbeachae NSW150]
          Length = 158

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 70/117 (59%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++       +  LN+ YR I+K TNVL+FP    +       +LGD+++  +++  E
Sbjct: 37  AELTIRLVTPEEMLQLNYTYRKINKTTNVLAFPCTLPTEVQLDYSLLGDVIICPQVLLDE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +  L K  E+H   ++IHG LHLLGYDH+ D DA +M+ +E  +L +LG  +PY+ +
Sbjct: 97  SKQLNKTLESHWALIVIHGILHLLGYDHIKDDDAAIMQSIEIKLLTELGFANPYDAE 153


>gi|219870682|ref|YP_002475057.1| putative metalloprotease [Haemophilus parasuis SH0165]
 gi|254803906|sp|B8F457|RRMF_HAEPS RecName: Full=Probable rRNA maturation factor
 gi|219690886|gb|ACL32109.1| metalloprotease [Haemophilus parasuis SH0165]
          Length = 162

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 87/159 (54%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDSHRIET 69
           +DLQIA EN      + L T  +  F   V   ++ +         E+++   D      
Sbjct: 5   IDLQIASENT-----VGLPTAAQ--FQHWVDKALAMEAKTADYPETEITIRIVDEAESHE 57

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA    K  E H  HL
Sbjct: 58  LNLTYRGKDKPTNVLSFP--FEVPEGIQLPLLGDLIICRQVVEKEAVEQEKPLEAHWAHL 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            IHG LHLLGYDH+ D++A  ME LE  I++ LG +DPY
Sbjct: 116 AIHGTLHLLGYDHLTDEEAEEMESLETEIMQSLGFDDPY 154


>gi|187927509|ref|YP_001897996.1| unkown domain/putative metalloprotease fusion protein [Ralstonia
           pickettii 12J]
 gi|309779789|ref|ZP_07674544.1| hypothetical protein HMPREF1004_01138 [Ralstonia sp. 5_7_47FAA]
 gi|187724399|gb|ACD25564.1| protein of unknown function UPF0054 [Ralstonia pickettii 12J]
 gi|308921366|gb|EFP67008.1| hypothetical protein HMPREF1004_01138 [Ralstonia sp. 5_7_47FAA]
          Length = 270

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 74/147 (50%), Gaps = 7/147 (4%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           +GDE+       +   + +   I+   F      +L++ F       TLN  YRG D  T
Sbjct: 128 YGDELKAAARKALPKERDIEGWIAPALFAD---AQLNVRFVGEEEGRTLNRTYRGKDYAT 184

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           NVL+F  A ++ D  S+    DIVL   ++E EA    K    H  HLI+HG LH  GYD
Sbjct: 185 NVLTFSYAESAEDPVSA----DIVLCCTVVEKEAKEQKKPLLAHYAHLIVHGALHAQGYD 240

Query: 142 HVDDKDACVMEGLERSILEDLGINDPY 168
           H D  DA  MEG+E  IL DLG  DPY
Sbjct: 241 HEDAADAKEMEGIETEILRDLGFADPY 267


>gi|91206125|ref|YP_538480.1| putative metalloprotease [Rickettsia bellii RML369-C]
 gi|122425195|sp|Q1RGX3|RRMF_RICBR RecName: Full=Probable rRNA maturation factor
 gi|91069669|gb|ABE05391.1| Putative metal-dependent hydrolase [Rickettsia bellii RML369-C]
          Length = 183

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 22/135 (16%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------AFASSDGCSS--------- 98
           ELS++ T++  I TLN ++R I+K TNVLSFP          F+ ++  SS         
Sbjct: 45  ELSILLTNNEEILTLNKQFRNIEKATNVLSFPANELNWQDLRFSGNEIASSNKPIILENL 104

Query: 99  -----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                + LGDI   +++I  E+    K FENH +HL+IH  LHL+G+DH +D +  +ME 
Sbjct: 105 GDSDYMHLGDIAFCHDVIYNESYEQQKTFENHFIHLLIHSILHLIGFDHQNDTETKIMEN 164

Query: 154 LERSILEDLGINDPY 168
           LE  IL   GI+ PY
Sbjct: 165 LEIEILAHFGISSPY 179


>gi|167855765|ref|ZP_02478519.1| hypothetical protein HPS_06120 [Haemophilus parasuis 29755]
 gi|167853105|gb|EDS24365.1| hypothetical protein HPS_06120 [Haemophilus parasuis 29755]
          Length = 162

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 87/159 (54%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDSHRIET 69
           +DLQIA EN      + L T  +  F   V   ++ +         E+++   D      
Sbjct: 5   IDLQIASENT-----VGLPTAAQ--FQHWVDKALAMEAKTADYPETEITIRIVDEAESHE 57

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA    K  E H  HL
Sbjct: 58  LNLTYRGKDKPTNVLSFP--FEMPEGIELPLLGDLIICRQVVEKEAVEQEKPLEAHWAHL 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            IHG LHLLGYDH+ D++A  ME LE  I++ LG +DPY
Sbjct: 116 AIHGTLHLLGYDHLTDEEAEEMESLETEIMQSLGFDDPY 154


>gi|149907592|ref|ZP_01896339.1| hypothetical protein PE36_06882 [Moritella sp. PE36]
 gi|149809262|gb|EDM69191.1| hypothetical protein PE36_06882 [Moritella sp. PE36]
          Length = 153

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA EN     E  L T  ++    A  N + K +   ++  E+++   D+   + L
Sbjct: 5   LDLQIATEN-----EQKLPTEAQL---NAWLNAVVKRF---QDSAEVTIRIVDNTESQQL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA    K    H  H++
Sbjct: 54  NNDYRGKDKPTNVLSFP--FEVPEGIELDLLGDLIICKQVVEREAKEQQKPLTAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH+ D++A  MEGLE  I+ +L   DPY
Sbjct: 112 IHGTLHLLGYDHIIDEEAEEMEGLETEIMLELEFEDPY 149


>gi|298293909|ref|YP_003695848.1| hypothetical protein Snov_3959 [Starkeya novella DSM 506]
 gi|296930420|gb|ADH91229.1| protein of unknown function UPF0054 [Starkeya novella DSM 506]
          Length = 172

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 75/124 (60%), Gaps = 1/124 (0%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           S  Y +  +  E+++  TD   I  LN ++RG D  TNVLSFPT   +  G     LGDI
Sbjct: 40  SSEYELDIDGAEIAVKLTDDASIRLLNRDWRGKDYATNVLSFPTPEMARAGGDP-HLGDI 98

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +A+E +  EA   GK F +HLVHL +HG LHLLGYDH   +DA  ME +ER +L  LG+
Sbjct: 99  AIAFETLAREAAEEGKPFADHLVHLAVHGTLHLLGYDHEVAEDAEEMEAMERRVLAGLGV 158

Query: 165 NDPY 168
            DPY
Sbjct: 159 PDPY 162


>gi|118602172|ref|YP_903387.1| hypothetical protein Rmag_0121 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|145572752|sp|A1AVF9|RRMF_RUTMC RecName: Full=Probable rRNA maturation factor
 gi|118567111|gb|ABL01916.1| protein of unknown function UPF0054 [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 145

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL +   +   I+ LN  YR  DK TNVLSF +           +LGD+V+  +++  E+
Sbjct: 35  ELLIRLVNETEIKNLNKVYRHQDKLTNVLSFQSDLPIE--IDEAVLGDVVICTQVVLKES 92

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K F NHL H+ IHG LHLLGYDH+D KDA  ME LE  IL  +GIN+PY
Sbjct: 93  IEQHKSFNNHLTHMAIHGMLHLLGYDHIDTKDAQQMENLEIKILAKIGINNPY 145


>gi|49080770|gb|AAT50056.1| PA3982 [synthetic construct]
          Length = 161

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 79/161 (49%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A        E   R  CE+   +   +             EL++   D      L
Sbjct: 5   LDLQVASAAPDLPSEAQFRAWCELALRQRPES-------------ELTIRLVDEAEGLEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D  TN+LSFP A    +     +LGD+V+   ++  EA    K  + H  HL+
Sbjct: 52  NSTYRHKDYATNLLSFP-ADVPDELLDIPLLGDLVICAPVVAREALEQRKPLQAHWAHLV 110

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 111 IHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 151


>gi|330892982|gb|EGH25643.1| metal-binding heat shock protein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 161

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 87/161 (54%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E +   DE   R  CE+            G   +    EL++   D +    L
Sbjct: 4   LDLQIASETSA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDENEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYAED 150


>gi|297520691|ref|ZP_06939077.1| putative metalloprotease [Escherichia coli OP50]
          Length = 107

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 65/100 (65%), Gaps = 2/100 (2%)

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H
Sbjct: 5   SLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAH 62

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 63  MVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 102


>gi|89092051|ref|ZP_01165006.1| hypothetical protein MED92_07786 [Oceanospirillum sp. MED92]
 gi|89083786|gb|EAR63003.1| hypothetical protein MED92_07786 [Oceanospirillum sp. MED92]
          Length = 151

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 2/101 (1%)

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           + LN  YR  DKPTNVLSFP  F   +G    +LGD+++  E++  EA+   K   +H  
Sbjct: 49  QELNHTYRDKDKPTNVLSFP--FDIPEGIPIQLLGDLIICAEVVVTEASEQNKALFDHWA 106

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H+++HG LHL+G+DH+ D +A  ME LER IL  L I DPY
Sbjct: 107 HMVVHGCLHLIGFDHIKDDEAEEMENLERQILASLDIADPY 147


>gi|257482208|ref|ZP_05636249.1| putative metalloprotease [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289625795|ref|ZP_06458749.1| putative metalloprotease [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648420|ref|ZP_06479763.1| putative metalloprotease [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298489003|ref|ZP_07007026.1| predicted metal-dependent hydrolase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156501|gb|EFH97598.1| predicted metal-dependent hydrolase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330867191|gb|EGH01900.1| metal-binding heat shock protein [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330871079|gb|EGH05788.1| metal-binding heat shock protein [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|331011327|gb|EGH91383.1| metal-binding heat shock protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 166

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 87/161 (54%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E +   DE   R  CE+            G   +    EL++   D +    L
Sbjct: 4   LDLQIASETSA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDENEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYAED 150


>gi|254877220|ref|ZP_05249930.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843241|gb|EET21655.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 169

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 13/144 (9%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + L E  FA     L++  + + +  V LS+V   +  I+ +N ++R  DKPTN++SF  
Sbjct: 30  QDLLEKCFA-----LVADKHNISQAEVNLSIV--SNQEIQQINKQFRHKDKPTNIISF-- 80

Query: 89  AFASSDG----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
            F   +G     +    GDIV+A E+++ EA    K  ++H  H+ IHG LHLLGYDH+D
Sbjct: 81  EFEKPEGLPEDIADNFWGDIVIAPEVLKKEAKEQNKNLDDHWQHIFIHGLLHLLGYDHID 140

Query: 145 DKDACVMEGLERSILEDLGINDPY 168
           D +A  ME LE  +L +LGI +PY
Sbjct: 141 DIEAEEMENLEIELLAELGIANPY 164


>gi|238790780|ref|ZP_04634539.1| metalloprotease [Yersinia frederiksenii ATCC 33641]
 gi|238721138|gb|EEQ12819.1| metalloprotease [Yersinia frederiksenii ATCC 33641]
          Length = 127

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 2/117 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++
Sbjct: 6   QEVAEVTIRLVDEAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVV 63

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I+++LG  DPY
Sbjct: 64  EQEAVEQDKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQNLGYPDPY 120


>gi|78067492|ref|YP_370261.1| putative metalloprotease [Burkholderia sp. 383]
 gi|77968237|gb|ABB09617.1| protein of unknown function UPF0054 [Burkholderia sp. 383]
          Length = 258

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 84/163 (51%), Gaps = 15/163 (9%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  I    F      +L++ F       
Sbjct: 109 PELDLSVQ-----YGDEITSDVRKTLPKRKLIAEWIEPALFAS---AQLTVRFVGEEEGR 160

Query: 69  TLNFEYRGIDKPTNVLSFPTAF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           TLN  YR  D PTNVL+F  A+ A+ DG    ++GD+VL   ++E EA+  GK    H  
Sbjct: 161 TLNAGYRHKDYPTNVLTF--AYDAAPDGT---VIGDLVLCCPVVEKEAHEQGKPLTAHYA 215

Query: 128 HLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 216 HLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 258


>gi|241668688|ref|ZP_04756266.1| hypothetical protein FphipA2_07970 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 158

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 13/144 (9%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + L E  FA     L++  + + +  V LS+V   +  I+ +N ++R  DKPTN++SF  
Sbjct: 19  QDLLEKCFA-----LVADKHNISQAEVNLSIV--SNQEIQQINKQFRHKDKPTNIISF-- 69

Query: 89  AFASSDG----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
            F   +G     +    GDIV+A E+++ EA    K  ++H  H+ IHG LHLLGYDH+D
Sbjct: 70  EFEKPEGLPEDIADNFWGDIVIAPEVLKKEAKEQNKNLDDHWQHIFIHGLLHLLGYDHID 129

Query: 145 DKDACVMEGLERSILEDLGINDPY 168
           D +A  ME LE  +L +LGI +PY
Sbjct: 130 DIEAEEMENLEIELLAELGIANPY 153


>gi|29653905|ref|NP_819597.1| hypothetical protein CBU_0567 [Coxiella burnetii RSA 493]
 gi|153208801|ref|ZP_01947028.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154706495|ref|YP_001424840.1| hypothetical metal-binding protein [Coxiella burnetii Dugway
           5J108-111]
 gi|161830561|ref|YP_001596496.1| hypothetical protein COXBURSA331_A0681 [Coxiella burnetii RSA 331]
 gi|165919083|ref|ZP_02219169.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii RSA
           334]
 gi|212212943|ref|YP_002303879.1| hypothetical metal-binding protein [Coxiella burnetii CbuG_Q212]
 gi|212218812|ref|YP_002305599.1| hypothetical metal-binding protein [Coxiella burnetii CbuK_Q154]
 gi|46577440|sp|Q83DX5|RRMF_COXBU RecName: Full=Probable rRNA maturation factor
 gi|189038728|sp|A9KCP4|RRMF_COXBN RecName: Full=Probable rRNA maturation factor
 gi|189040577|sp|A9NC56|RRMF_COXBR RecName: Full=Probable rRNA maturation factor
 gi|226701644|sp|B6J855|RRMF_COXB1 RecName: Full=Probable rRNA maturation factor
 gi|226701649|sp|B6J1A6|RRMF_COXB2 RecName: Full=Probable rRNA maturation factor
 gi|29541168|gb|AAO90111.1| hypothetical metal-binding protein [Coxiella burnetii RSA 493]
 gi|120575707|gb|EAX32331.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154355781|gb|ABS77243.1| hypothetical metal-binding protein [Coxiella burnetii Dugway
           5J108-111]
 gi|161762428|gb|ABX78070.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii RSA
           331]
 gi|165917217|gb|EDR35821.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii RSA
           334]
 gi|212011353|gb|ACJ18734.1| hypothetical metal-binding protein [Coxiella burnetii CbuG_Q212]
 gi|212013074|gb|ACJ20454.1| hypothetical metal-binding protein [Coxiella burnetii CbuK_Q154]
          Length = 152

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           +N   L++ F D      LN  YR    PTNVLSFP       G  S   GD+ +   ++
Sbjct: 36  KNKSALTIRFIDKEESTELNEHYRHKKGPTNVLSFPDE--PIPGFPSESFGDLAICAPLV 93

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             EA+   K  E H  HLI HGFLHLLGYDHV+++DA  ME LE  IL  LG  +PYE
Sbjct: 94  AEEAHAQHKTTEAHFAHLITHGFLHLLGYDHVENEDAEEMENLEIKILSQLGFENPYE 151


>gi|295687477|ref|YP_003591170.1| hypothetical protein Cseg_0020 [Caulobacter segnis ATCC 21756]
 gi|295429380|gb|ADG08552.1| protein of unknown function UPF0054 [Caulobacter segnis ATCC 21756]
          Length = 157

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 5/113 (4%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++ T+   ++ LN ++R  D  TNVLSFP+   + +G     +GDI LAY +   EA   
Sbjct: 46  ILLTNDDTVQGLNRDFRQKDYATNVLSFPSP-PNPEG----QIGDIALAYGVCAREAEEQ 100

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +HL HL+ HG LHLLGYDH  D +A  ME LER IL  L + DPY  D
Sbjct: 101 GKPLAHHLQHLVAHGVLHLLGYDHESDDEAEAMEALEREILAGLDVPDPYASD 153


>gi|260574095|ref|ZP_05842100.1| protein of unknown function UPF0054 [Rhodobacter sp. SW2]
 gi|259023561|gb|EEW26852.1| protein of unknown function UPF0054 [Rhodobacter sp. SW2]
          Length = 168

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 67/125 (53%), Gaps = 13/125 (10%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLM----------LGD 103
           L L+  D  RI  LN  +R   + TNVLS+P+   A     G   L           LGD
Sbjct: 43  LCLMGCDDARIAELNAAFRAKGQATNVLSWPSEDRAAEVPGGVPELPEPGTADDPEELGD 102

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           I +A+E    EA   GK    H+ HLI+HG LHLLGYDHVDD DA +ME  E  IL  LG
Sbjct: 103 IAIAWETCAREAAEQGKPQVAHVTHLIVHGVLHLLGYDHVDDADAELMETTEAGILAGLG 162

Query: 164 INDPY 168
           I DPY
Sbjct: 163 IADPY 167


>gi|319760452|ref|YP_004124390.1| hypothetical protein BVAF_319 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039166|gb|ADV33716.1| conserved hypothetical protein [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 155

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 12/158 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L+LQIA  N L+G          +   K     I K +F+    +EL++   D   +  L
Sbjct: 7   LNLQIACTN-LYG----------IPNKKIFQKWIKKIFFLYNKKIELTIRIVDIQEMLYL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N+ Y G   PTNVLSFP       G  S +LGDIV+  +IIE E+         H  H+I
Sbjct: 56  NWYYAGKKHPTNVLSFPFK-TPLKGILSSLLGDIVICKQIIEYESKQYNISSIMHWAHMI 114

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH+ +KDA +M  +E +I++  G ++ Y
Sbjct: 115 IHGSLHLLGYDHILNKDAELMHQMELNIMQKFGYHNYY 152


>gi|238786073|ref|ZP_04630031.1| metalloprotease [Yersinia bercovieri ATCC 43970]
 gi|238713012|gb|EEQ05066.1| metalloprotease [Yersinia bercovieri ATCC 43970]
          Length = 154

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 81/159 (50%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA  N+     E   +   E V  +             + + E+++   D      
Sbjct: 3   LDLQIACANSQGLPTEADFQQWLEAVLPQF------------QEVSEVTIRLVDEAESHQ 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA    K    H  H+
Sbjct: 51  LNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAVEQEKALFAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 109 VVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 147


>gi|254467928|ref|ZP_05081334.1| conserved hypothetical protein TIGR00043 [beta proteobacterium
           KB13]
 gi|207086738|gb|EDZ64021.1| conserved hypothetical protein TIGR00043 [beta proteobacterium
           KB13]
          Length = 144

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 6/114 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++  T +   + LN  YR  +KPTN+LSF      S      ++GD+VL ++I++ E
Sbjct: 33  AEITVRITAASESQELNHHYRNQNKPTNILSFNIESNKS------LIGDLVLCHDIVKKE 86

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K+ ++H +HL++HGFLHL+G+DH+++KD  +ME +E   L+   I +PY
Sbjct: 87  AKAQNKKIKDHYIHLVLHGFLHLMGHDHINEKDRLIMEKIEIKTLKLFNIQNPY 140


>gi|254247271|ref|ZP_04940592.1| hypothetical protein BCPG_02058 [Burkholderia cenocepacia PC184]
 gi|124872047|gb|EAY63763.1| hypothetical protein BCPG_02058 [Burkholderia cenocepacia PC184]
          Length = 270

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 14/164 (8%)

Query: 9   PR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           PR L+L ++V+   +GDEI       +   K ++  I    F      +L++ F   +  
Sbjct: 118 PRALELDLSVQ---YGDEITSDVRKTLPKRKLIAEWIEPALFAS---AQLTVRFVGENEG 171

Query: 68  ETLNFEYRGIDKPTNVLSFPTAF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            TLN  YR  D PTNVL+F  A+ A+ DG    ++GD+VL   ++E EA+  GK    H 
Sbjct: 172 RTLNAGYRHKDYPTNVLTF--AYDAAPDGT---VIGDLVLCCPVVEKEAHDQGKPLAAHY 226

Query: 127 VHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH  +D+DA  ME LE  IL  LG  +PY+
Sbjct: 227 AHLLVHGALHAQGYDHETNDEDAAEMEALEVDILAKLGFPNPYQ 270


>gi|300705109|ref|YP_003746712.1| metalloprotease [Ralstonia solanacearum CFBP2957]
 gi|299072773|emb|CBJ44128.1| Putative metalloprotease [Ralstonia solanacearum CFBP2957]
          Length = 254

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 79/158 (50%), Gaps = 12/158 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDL +   +AL G     R  C     K +   I+   F      +L++ F D     TL
Sbjct: 106 LDLTVQHGDALKG---AARKACPK--QKDIEAWIAPALFAD---AQLNVRFVDEEEGRTL 157

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D  TNVL+F  A    D  S+    D+VL   ++E EA   GK    H  HLI
Sbjct: 158 NRTYRGKDYATNVLTFSYAETEHDPVSA----DVVLCCPVVEKEAKDQGKPLRAHYAHLI 213

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LH  GYDH +  +A  MEG+E ++L +LG  DPY
Sbjct: 214 VHGALHAQGYDHENPAEAKEMEGIETAVLTELGFPDPY 251


>gi|317491141|ref|ZP_07949577.1| hypothetical protein HMPREF0864_00340 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920688|gb|EFV42011.1| hypothetical protein HMPREF0864_00340 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 164

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 86/159 (54%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA EN      E   R   E V  K          F +E  V + LV  D      
Sbjct: 13  LDLQIACENTEGLPAEADFRLWLEAVLPK----------FQEEAEVTIRLV--DEAESHE 60

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA        +H  H+
Sbjct: 61  LNMTYRGKDKPTNVLSFP--FEAPPGIELPLLGDMIICRQVVEAEAKEQEITLLSHWAHM 118

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH+ D++A  ME LE  I+++LG  DPY
Sbjct: 119 VVHGSLHLLGYDHIIDEEAEEMEALEAEIMQELGYPDPY 157


>gi|329296078|ref|ZP_08253414.1| hypothetical protein Pstas_04461 [Plautia stali symbiont]
          Length = 157

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 89/160 (55%), Gaps = 17/160 (10%)

Query: 11  LDLQIAV--ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           LDLQ+A   EN L           E  F + +   ++   F  E+ V + LV  D     
Sbjct: 6   LDLQLACADENGL---------PAEAAFQRWLEAAVTP--FQPESEVTIRLV--DEAESH 52

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H
Sbjct: 53  ELNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQGKSPEAHWAH 110

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D++A  ME LE  I+  LG  DPY
Sbjct: 111 MVVHGTLHLLGYDHIEDEEAEEMEALETEIMLALGYPDPY 150


>gi|325849563|ref|ZP_08170801.1| translation metalloprotein YbeY [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480044|gb|EGC83121.1| translation metalloprotein YbeY [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 154

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 74/121 (61%), Gaps = 6/121 (4%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCS-----SLMLGD 103
           V E   E+SL F D  +I  LN ++RGID+ T+VLSFP   F + D  +      LMLGD
Sbjct: 32  VDEKKCEISLSFVDEIKIRDLNKDFRGIDRVTDVLSFPIEDFFNEDRKTLLEKPYLMLGD 91

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +V+  ++   +A  LG  FE  +++L  H  LHLLGYDH++D D  +M   E+ ++++LG
Sbjct: 92  VVICTDVARKQAKELGHSFEREIMYLTCHSILHLLGYDHMEDDDKKIMRSKEKQVMKNLG 151

Query: 164 I 164
           +
Sbjct: 152 V 152


>gi|198282886|ref|YP_002219207.1| hypothetical protein Lferr_0750 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198247407|gb|ACH83000.1| protein of unknown function UPF0054 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 165

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 82/163 (50%), Gaps = 10/163 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           RL L++AV++ +    +  R        +A+S   S      + I ELSL F     +  
Sbjct: 3   RLYLRMAVDDVVAAMPLPPRGEVRRSILQALSA-PSARVSADDRIRELSLTFVGDAEMAA 61

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFENH 125
           LN  YR    PTN LSFP      D    L    +LGDIV+A  ++  EA   GK   +H
Sbjct: 62  LNEGYRHKAAPTNCLSFP-----QDALPVLFRRDLLGDIVIAPAVVGREAAAQGKSLRDH 116

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL+IH  LHLLGYDH    DA  ME LE  +L ++G+ DPY
Sbjct: 117 YRHLLIHSTLHLLGYDHELAADAQEMEALETRLLAEMGVADPY 159


>gi|15617041|ref|NP_240254.1| hypothetical protein BU442 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681793|ref|YP_002468179.1| hypothetical protein BUAP5A_435 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682348|ref|YP_002468732.1| hypothetical protein BUAPTUC7_436 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|25403623|pir||D84981 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039106|dbj|BAB13140.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219622081|gb|ACL30237.1| hypothetical protein BUAPTUC7_436 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624636|gb|ACL30791.1| hypothetical protein BUAP5A_435 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 111

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 2/106 (1%)

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D   I+ LNF YR  +KPTN+LSFP  F      +  +LGD+VL   IIE E+    K  
Sbjct: 3   DEWEIKKLNFNYRKKNKPTNILSFP--FNKFIKINYKLLGDLVLCKNIIEKESLKYNKSL 60

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E+H  H+ IHG LHLLGYDH ++K+A +ME LE  I+  L    P+
Sbjct: 61  ESHWAHITIHGTLHLLGYDHQNNKEADIMERLENKIMLSLNYKKPH 106


>gi|167626246|ref|YP_001676746.1| hypothetical protein Fphi_0025 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189030202|sp|B0TXS6|RRMF_FRAP2 RecName: Full=Probable rRNA maturation factor
 gi|167596247|gb|ABZ86245.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 158

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 13/144 (9%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + L E  FA     L++  + + +  V +S+V   +  I+ +N ++R  DKPTN++SF  
Sbjct: 19  QDLLEKCFA-----LVADKHNISQAEVNVSIV--SNQEIQQINKQFRHKDKPTNIISF-- 69

Query: 89  AFASSDG----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
            F   +G     ++   GDIV+A E+++ EA    K  ++H  H+ IHG LHLLGYDH+D
Sbjct: 70  EFEKPEGLPEDIAANFWGDIVIAPEVLKKEAKEQNKNLDDHWQHIFIHGLLHLLGYDHID 129

Query: 145 DKDACVMEGLERSILEDLGINDPY 168
           D +A  ME LE  +L +LGI +PY
Sbjct: 130 DIEAEEMENLEIELLAELGIANPY 153


>gi|197335301|ref|YP_002155519.1| putative metalloprotease [Vibrio fischeri MJ11]
 gi|226702102|sp|B5FBL1|RRMF_VIBFM RecName: Full=Probable rRNA maturation factor
 gi|197316791|gb|ACH66238.1| putative metalloprotease [Vibrio fischeri MJ11]
          Length = 153

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 83/160 (51%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQIA EN      E  L T    V  +                 EL++   D     
Sbjct: 4   ELDLQIACENENGLPSEKDLMTWLNAVIPQFQPQ------------AELTIRIVDEKESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  ELNHEYRGKDKPTNVLSFP--FEAPPGLELDLLGDLIICRQVVEEEAIEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH++D +A  ME LE  +++ +G  DPY
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETELMQGMGFEDPY 149


>gi|94309396|ref|YP_582606.1| unkown domain/putative metalloprotease fusion protein [Cupriavidus
           metallidurans CH34]
 gi|93353248|gb|ABF07337.1| putative metal-dependent hydrolase [Cupriavidus metallidurans CH34]
          Length = 245

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 65/113 (57%), Gaps = 4/113 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L++ F D     TLN  YRG D  TNVL+F  A+A +D     + GDIVL   ++E EA 
Sbjct: 133 LTVRFVDETEGRTLNRSYRGKDYATNVLTF--AYAEND--DDPVAGDIVLCCPVVESEAK 188

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              K  E H  HLI+HG LH  GY+H DD +A  ME +E   L+ LG  DPY+
Sbjct: 189 AQKKSLEAHYAHLIVHGVLHAQGYEHDDDTEAEEMEAIETETLQALGFEDPYK 241


>gi|113969346|ref|YP_733139.1| putative metalloprotease [Shewanella sp. MR-4]
 gi|122944050|sp|Q0HLI5|RRMF_SHESM RecName: Full=Probable rRNA maturation factor
 gi|113884030|gb|ABI38082.1| protein of unknown function UPF0054 [Shewanella sp. MR-4]
          Length = 153

 Score = 94.4 bits (233), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 84/146 (57%), Gaps = 11/146 (7%)

Query: 33  EVVFAKAVSNLISKGYF---VKENI------VELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           +V +A A   L S+  F   VK  I       EL++   DS   + LN  YRG DKPTNV
Sbjct: 8   DVQYATASDYLPSEEQFALWVKTAIGNSMEQAELTIRIVDSRESQMLNSTYRGKDKPTNV 67

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           LSFP  F +       +LGD+V+   ++E EA    K  E H  H+++HG LHLLGYDH+
Sbjct: 68  LSFP--FEAPPEIELPLLGDLVICATVVENEAREQDKTLEAHWAHMVVHGCLHLLGYDHI 125

Query: 144 DDKDACVMEGLERSILEDLGINDPYE 169
           +D++A  ME LE  ++E LG  DPY+
Sbjct: 126 EDEEAEEMESLETQLIESLGFTDPYK 151


>gi|153001814|ref|YP_001367495.1| putative metalloprotease [Shewanella baltica OS185]
 gi|304410290|ref|ZP_07391909.1| protein of unknown function UPF0054 [Shewanella baltica OS183]
 gi|307301999|ref|ZP_07581757.1| protein of unknown function UPF0054 [Shewanella baltica BA175]
 gi|166229104|sp|A6WRJ3|RRMF_SHEB8 RecName: Full=Probable rRNA maturation factor
 gi|151366432|gb|ABS09432.1| protein of unknown function UPF0054 [Shewanella baltica OS185]
 gi|304351699|gb|EFM16098.1| protein of unknown function UPF0054 [Shewanella baltica OS183]
 gi|306914037|gb|EFN44458.1| protein of unknown function UPF0054 [Shewanella baltica BA175]
          Length = 153

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 73/117 (62%), Gaps = 2/117 (1%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           N  EL++   DS   + LN  YRG DKPTNVLSFP  F +       +LGD+V+   ++E
Sbjct: 37  NEAELTIRIVDSRESQMLNSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVE 94

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            EA    K  E H  H+++HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 95  NEAREQQKTLEAHWAHMVVHGCLHLLGYDHIEDEEAEEMESLETQLIEGLGFTDPYK 151


>gi|145558828|sp|Q1LR89|RRMF_RALME RecName: Full=Probable rRNA maturation factor
          Length = 197

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 65/113 (57%), Gaps = 4/113 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L++ F D     TLN  YRG D  TNVL+F  A+A +D     + GDIVL   ++E EA 
Sbjct: 85  LTVRFVDETEGRTLNRSYRGKDYATNVLTF--AYAEND--DDPVAGDIVLCCPVVESEAK 140

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              K  E H  HLI+HG LH  GY+H DD +A  ME +E   L+ LG  DPY+
Sbjct: 141 AQKKSLEAHYAHLIVHGVLHAQGYEHDDDTEAEEMEAIETETLQALGFEDPYK 193


>gi|107023630|ref|YP_621957.1| unkown domain/ metalloprotease fusion protein [Burkholderia
           cenocepacia AU 1054]
 gi|116690715|ref|YP_836338.1| putative metalloprotease [Burkholderia cenocepacia HI2424]
 gi|170734058|ref|YP_001766005.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           cenocepacia MC0-3]
 gi|105893819|gb|ABF76984.1| protein of unknown function UPF0054 [Burkholderia cenocepacia AU
           1054]
 gi|116648804|gb|ABK09445.1| protein of unknown function UPF0054 [Burkholderia cenocepacia
           HI2424]
 gi|169817300|gb|ACA91883.1| protein of unknown function UPF0054 [Burkholderia cenocepacia
           MC0-3]
          Length = 258

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 89/164 (54%), Gaps = 14/164 (8%)

Query: 9   PR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           PR L+L ++V+   +GDEI       +   K ++  I    F      +L++ F   +  
Sbjct: 106 PRALELDLSVQ---YGDEITSDVRKTLPKRKLIAEWIEPALFAS---AQLTVRFVGENEG 159

Query: 68  ETLNFEYRGIDKPTNVLSFPTAF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            TLN  YR  D PTNVL+F  A+ A+ DG    ++GD+VL   ++E EA+  GK    H 
Sbjct: 160 RTLNAGYRHKDYPTNVLTF--AYDAAPDGT---VIGDLVLCCPVVEKEAHDQGKPLAAHY 214

Query: 127 VHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 215 AHLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 258


>gi|145558836|sp|Q39D49|RRMF_BURS3 RecName: Full=Probable rRNA maturation factor
          Length = 172

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 84/163 (51%), Gaps = 15/163 (9%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  I    F      +L++ F       
Sbjct: 23  PELDLSVQ-----YGDEITSDVRKTLPKRKLIAEWIEPALFAS---AQLTVRFVGEEEGR 74

Query: 69  TLNFEYRGIDKPTNVLSFPTAF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           TLN  YR  D PTNVL+F  A+ A+ DG    ++GD+VL   ++E EA+  GK    H  
Sbjct: 75  TLNAGYRHKDYPTNVLTF--AYDAAPDGT---VIGDLVLCCPVVEKEAHEQGKPLTAHYA 129

Query: 128 HLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 130 HLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 172


>gi|254284310|ref|ZP_04959278.1| putative metalloprotease BUsg_427 [gamma proteobacterium NOR51-B]
 gi|219680513|gb|EED36862.1| putative metalloprotease BUsg_427 [gamma proteobacterium NOR51-B]
          Length = 162

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 2/133 (1%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F++ V+  +  G        E+S+       I   N +YR  ++PTNVLSFP +      
Sbjct: 21  FSRWVNAALVSGQHAGCFTPEVSVRIAGEREITAFNQQYRDRNRPTNVLSFPASVPPE-- 78

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
             S +LGDIV+   ++  EA       E+H  HL +HG LHLLG+DH+ D +A +ME LE
Sbjct: 79  VESGLLGDIVICAPVVIAEAREQECSLESHWAHLTVHGTLHLLGFDHIRDDEAEIMEALE 138

Query: 156 RSILEDLGINDPY 168
            S L +LG  +PY
Sbjct: 139 VSALAELGFGNPY 151


>gi|66047574|ref|YP_237415.1| putative metalloprotease [Pseudomonas syringae pv. syringae B728a]
 gi|75500575|sp|Q4ZN95|RRMF_PSEU2 RecName: Full=Probable rRNA maturation factor
 gi|63258281|gb|AAY39377.1| Protein of unknown function UPF0054 [Pseudomonas syringae pv.
           syringae B728a]
 gi|330969454|gb|EGH69520.1| metal-binding heat shock protein [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 166

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 87/161 (54%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E +   DE  LR  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQVASETSA-PDEARLRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NNTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSVDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|294085155|ref|YP_003551915.1| putative metal-dependent hydrolase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664730|gb|ADE39831.1| Predicted metal-dependent hydrolase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 240

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 67/125 (53%), Gaps = 13/125 (10%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLM-LGD 103
           +SL+     +I  LN ++RGIDK TNVLSFP A             A  D       LGD
Sbjct: 77  VSLLLCSDAKIRQLNHDHRGIDKATNVLSFPAADDDDMPYAMGAMDADDDNAPQRQELGD 136

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           I +AY I   EA        +H+ HL  HG LHLLGYDH  D +A  ME LE S+LE LG
Sbjct: 137 IAIAYGICAREAEESSIRISDHITHLFGHGVLHLLGYDHDQDAEADAMEALEISLLEALG 196

Query: 164 INDPY 168
           I +PY
Sbjct: 197 IANPY 201


>gi|28871921|ref|NP_794540.1| hypothetical protein PSPTO_4806 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|37999558|sp|Q87VX9|RRMF_PSESM RecName: Full=Probable rRNA maturation factor
 gi|28855174|gb|AAO58235.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 166

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E     DE   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQIASETPA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|119504407|ref|ZP_01626487.1| Predicted metal-dependent hydrolase [marine gamma proteobacterium
           HTCC2080]
 gi|119459915|gb|EAW41010.1| Predicted metal-dependent hydrolase [marine gamma proteobacterium
           HTCC2080]
          Length = 163

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+  +++  +  LN  +R    PTNVLSFP   ++   C   +LGDIV+   ++  EA
Sbjct: 41  ELSIRISNTDEMTQLNQRFRNRSGPTNVLSFPADISAEIPCE--LLGDIVICSPLVWKEA 98

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
              GK    H  HL +HG LHLLGYDH  D  A  ME LE  IL+  G +DPY
Sbjct: 99  QEQGKPPICHWAHLTVHGVLHLLGYDHETDDAAQNMEALETQILQQFGCSDPY 151


>gi|85713015|ref|ZP_01044053.1| Predicted metal-dependent hydrolase [Idiomarina baltica OS145]
 gi|85693184|gb|EAQ31144.1| Predicted metal-dependent hydrolase [Idiomarina baltica OS145]
          Length = 156

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 2/117 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++   D     +LN E+R  D  TNVLSFP  F +       +LGD+V+  +++E E
Sbjct: 41  AELTVRVVDPAEGRSLNHEFRSKDYATNVLSFP--FEAPIEMPIPLLGDLVICAQVVERE 98

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           A+   K   +H  H++IHG LHLLGYDH++D +A  ME +E+  L  L I DPY+++
Sbjct: 99  ADEQQKPLMHHWTHMVIHGTLHLLGYDHIEDAEAEHMERIEKDALARLDIPDPYQIN 155


>gi|88705748|ref|ZP_01103458.1| Protein of unknown function, UPF0054 [Congregibacter litoralis
           KT71]
 gi|88700261|gb|EAQ97370.1| Protein of unknown function, UPF0054 [Congregibacter litoralis
           KT71]
          Length = 163

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           +A    ++ G        E +L   D   ++ LN +YR  + PTNVLSFP    +    +
Sbjct: 22  RAAETALTVGSPAAHGHWEAALRIVDEAEMQQLNAQYRARNTPTNVLSFPADLPAD--VT 79

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             +LGDIV+   +++ EA   GK    H  H+++HG LHLLG+DH  D +A  ME LE  
Sbjct: 80  LNLLGDIVICAPVVKKEATNQGKPLAAHWDHMLVHGVLHLLGFDHESDAEATHMESLETQ 139

Query: 158 ILEDLGINDPYEVD 171
            L  LG   PY  D
Sbjct: 140 ALATLGWPCPYNAD 153


>gi|71909141|ref|YP_286728.1| hypothetical protein Daro_3529 [Dechloromonas aromatica RCB]
 gi|123626555|sp|Q47A73|RRMF_DECAR RecName: Full=Probable rRNA maturation factor
 gi|71848762|gb|AAZ48258.1| Protein of unknown function UPF0054 [Dechloromonas aromatica RCB]
          Length = 149

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 17/164 (10%)

Query: 7   NLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           N P   L ++V+ A   + + LR    V +A+A   L+  G        E+++   D+  
Sbjct: 3   NAPSNRLNLSVQYACNREGLPLRADF-VRWARAA--LVGGG--------EVTIRLVDADE 51

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            ++LN EYRG D  TNVLSFP           +++GD+V+   ++  EA    K  E H 
Sbjct: 52  GQSLNKEYRGKDYATNVLSFPY------DTEPVVMGDLVVCPSVVSKEAAEQNKPLEAHY 105

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            HL +HG LHL G+DH +D DA  ME  ER IL  +G  DPY V
Sbjct: 106 AHLTVHGMLHLQGWDHDNDDDAQAMEDEEREILAAMGYPDPYAV 149


>gi|254251465|ref|ZP_04944783.1| hypothetical protein BDAG_00652 [Burkholderia dolosa AUO158]
 gi|124894074|gb|EAY67954.1| hypothetical protein BDAG_00652 [Burkholderia dolosa AUO158]
          Length = 270

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 79/161 (49%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  I    F   +  +L++ F       
Sbjct: 121 PELDLSVQ-----YGDEIAPDVRKTLPKRKLIAEWIEPALF---SSAQLTVRFVGEEEGR 172

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA   GK  + H  H
Sbjct: 173 TLNAGYRHKDYPTNVLTF----AYDPAPDGTVIGDLVLCCPVVEKEAQEQGKPLDAHYAH 228

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY
Sbjct: 229 LLVHGVLHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPY 269


>gi|149202104|ref|ZP_01879077.1| hypothetical protein RTM1035_12293 [Roseovarius sp. TM1035]
 gi|149144202|gb|EDM32233.1| hypothetical protein RTM1035_12293 [Roseovarius sp. TM1035]
          Length = 162

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 10/123 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------GCSSLMLGDIV 105
           E+S++  D  RI  LN ++R   +PTNVLS+P+   +++                LGDI 
Sbjct: 40  EISILACDDARIAVLNEDFRDKPQPTNVLSWPSEERAAEVSGVRPAPPMPSPDPELGDIA 99

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A++    EA    K   +H+ HLI+H  LHLLGYDHV D+DA +ME  E  IL  LG++
Sbjct: 100 IAWDTCVREAAEGEKPLADHVTHLIVHAVLHLLGYDHVRDQDATLMETTEVEILGKLGVS 159

Query: 166 DPY 168
           DPY
Sbjct: 160 DPY 162


>gi|325524865|gb|EGD02813.1| putative metalloprotease fusion protein [Burkholderia sp. TJI49]
          Length = 258

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 85/163 (52%), Gaps = 13/163 (7%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           L  L+L ++V+   +GDEI       +   K ++  I    F      +L++ F      
Sbjct: 106 LRELELDLSVQ---YGDEITSEVRKTLPKRKLIAEWIEPALFAS---AQLTVRFVGEEEG 159

Query: 68  ETLNFEYRGIDKPTNVLSFPTAF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            TLN  YR  D PTNVL+F  A+ A+ DG    ++GD+VL   ++E EA   GK    H 
Sbjct: 160 RTLNAGYRHKDYPTNVLTF--AYDAAPDGT---VIGDLVLCCPVVEKEAREQGKPLAAHY 214

Query: 127 VHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
            HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY
Sbjct: 215 AHLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPY 257


>gi|330963482|gb|EGH63742.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 166

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E     DE   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQVASETPA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|24372762|ref|NP_716804.1| putative metalloprotease [Shewanella oneidensis MR-1]
 gi|29428198|sp|Q8EHN9|RRMF_SHEON RecName: Full=Probable rRNA maturation factor
 gi|24346837|gb|AAN54249.1|AE015561_9 conserved hypothetical protein TIGR00043 [Shewanella oneidensis
           MR-1]
          Length = 153

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDL + V+ A   D +       +    A+ N + +         EL++   D+   + L
Sbjct: 3   LDLALDVQYATTSDYLPSEEQLALWVKTAIGNSMKQA--------ELTIRIVDARESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NGTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICASVVENEAREQDKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTDPYK 151


>gi|85705230|ref|ZP_01036329.1| hypothetical protein ROS217_17217 [Roseovarius sp. 217]
 gi|85670103|gb|EAQ24965.1| hypothetical protein ROS217_17217 [Roseovarius sp. 217]
          Length = 162

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 10/123 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS----------SLMLGDIV 105
           E+S++  D  RI  LN ++R   +PTNVLS+P+    ++                LGDI 
Sbjct: 40  EISVLGCDDARIAALNEDFRDKPQPTNVLSWPSEERGAEAAGVRPGLPVSGPDPELGDIA 99

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A+E    EA    K   +H+ HLI+H  LHLLGYDH+ D+DA +ME  E  IL  LG++
Sbjct: 100 IAWETCLREAAEGDKSLADHVTHLIVHAVLHLLGYDHLRDQDATLMETTEVEILGKLGVS 159

Query: 166 DPY 168
           DPY
Sbjct: 160 DPY 162


>gi|260427895|ref|ZP_05781874.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260422387|gb|EEX15638.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 159

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 69/120 (57%), Gaps = 7/120 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCSSLM--LGDIVLAY 108
           E++++  D  RI  LN ++R    PTNVLS+P+     +     G   +   LGDI +A+
Sbjct: 40  EIAILACDDARIAELNGDFRDKPAPTNVLSWPSEERDPEDLPEPGMPGMPEELGDIAIAW 99

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E    EA    K    HL HLI+H  LHLLGYDH+ D+DA VME LE  IL  LG+ +PY
Sbjct: 100 ETCLREAQEQNKPLSAHLTHLIVHATLHLLGYDHIRDEDATVMETLEVEILGKLGVANPY 159


>gi|240949197|ref|ZP_04753541.1| putative metalloprotease [Actinobacillus minor NM305]
 gi|240296313|gb|EER46957.1| putative metalloprotease [Actinobacillus minor NM305]
          Length = 163

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 8/163 (4%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           + +P +DLQIA EN+     +   TL    + K      ++     E   E+++   D  
Sbjct: 1   MTIPMIDLQIACENSENLPSLEQLTL----WVKTALAYEAQTEDFPET--EMTIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESH 112

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL IHG LHLLGYDH++D++A  MEGLE  I++ LG  DPY
Sbjct: 113 WAHLAIHGTLHLLGYDHIEDEEAEEMEGLETEIMQKLGFADPY 155


>gi|213966837|ref|ZP_03394988.1| conserved hypothetical protein TIGR00043 [Pseudomonas syringae pv.
           tomato T1]
 gi|301381968|ref|ZP_07230386.1| putative metalloprotease [Pseudomonas syringae pv. tomato Max13]
 gi|302058772|ref|ZP_07250313.1| putative metalloprotease [Pseudomonas syringae pv. tomato K40]
 gi|302135148|ref|ZP_07261138.1| putative metalloprotease [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213928687|gb|EEB62231.1| conserved hypothetical protein TIGR00043 [Pseudomonas syringae pv.
           tomato T1]
 gi|330873561|gb|EGH07710.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 166

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E     DE   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQVASETPA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|296282477|ref|ZP_06860475.1| metal-dependent hydrolase [Citromicrobium bathyomarinum JL354]
          Length = 160

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-----SDGCSSLMLGDIVLAYE 109
           +E S++FT   ++  LN ++R  DKPTNVLSFP          + G    +LGDI LAYE
Sbjct: 38  LEASILFTSDAQVHELNRDWREKDKPTNVLSFPMLERDELIDLAPGGPPALLGDIALAYE 97

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
               EA   G   E H  HL++HG LHL G DH +   DA  ME LE   L  LG+ DPY
Sbjct: 98  TCAREAAEKGIPLEAHASHLVVHGLLHLAGLDHEISPADAQEMEALEVKALALLGLPDPY 157


>gi|117919455|ref|YP_868647.1| putative metalloprotease [Shewanella sp. ANA-3]
 gi|145572749|sp|A0KTX2|RRMF_SHESA RecName: Full=Probable rRNA maturation factor
 gi|117611787|gb|ABK47241.1| protein of unknown function UPF0054 [Shewanella sp. ANA-3]
          Length = 153

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 11/146 (7%)

Query: 33  EVVFAKAVSNLISKGYF---VKENI------VELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           +V +A A   L S+  F   VK  I       EL++   D+   + LN  YRG DKPTNV
Sbjct: 8   DVQYATASDYLPSEDQFALWVKTAIGNSMEQAELTIRIVDARESQMLNSTYRGKDKPTNV 67

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           LSFP  F +       +LGD+V+   ++E EA    K  E H  H+++HG LHLLGYDH+
Sbjct: 68  LSFP--FEAPPEIELPLLGDLVICAAVVENEAREQDKTLEAHWAHMVVHGCLHLLGYDHI 125

Query: 144 DDKDACVMEGLERSILEDLGINDPYE 169
           +D++A  ME LE  ++E LG  DPY+
Sbjct: 126 EDEEAEEMESLETQLIESLGFTDPYK 151


>gi|330953008|gb|EGH53268.1| metal-binding heat shock protein [Pseudomonas syringae Cit 7]
          Length = 166

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E +   DE   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQIASETSA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSVDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|51595458|ref|YP_069649.1| metalloprotease [Yersinia pseudotuberculosis IP 32953]
 gi|153949147|ref|YP_001401879.1| metalloprotease [Yersinia pseudotuberculosis IP 31758]
 gi|186894489|ref|YP_001871601.1| putative metalloprotease [Yersinia pseudotuberculosis PB1/+]
 gi|59799101|sp|Q66DD5|RRMF_YERPS RecName: Full=Probable rRNA maturation factor
 gi|166988546|sp|A7FKV1|RRMF_YERP3 RecName: Full=Probable rRNA maturation factor
 gi|238691434|sp|B2K894|RRMF_YERPB RecName: Full=Probable rRNA maturation factor
 gi|51588740|emb|CAH20351.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|152960642|gb|ABS48103.1| conserved hypothetical protein TIGR00043 [Yersinia
           pseudotuberculosis IP 31758]
 gi|186697515|gb|ACC88144.1| protein of unknown function UPF0054 [Yersinia pseudotuberculosis
           PB1/+]
          Length = 157

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++
Sbjct: 36  QPVSEVTIRLVDEAESHDLNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVV 93

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E EA    K    H  H+++HG LHLLGYDH+DD +A  ME +E  I+  LG  DPY
Sbjct: 94  EKEAIEQEKALLAHWAHMVVHGSLHLLGYDHIDDDEAEEMELIETEIMHGLGYPDPY 150


>gi|218889735|ref|YP_002438599.1| putative metalloprotease [Pseudomonas aeruginosa LESB58]
 gi|226696066|sp|B7V9D4|RRMF_PSEA8 RecName: Full=Probable rRNA maturation factor
 gi|218769958|emb|CAW25720.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
          Length = 160

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 78/161 (48%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A        E   R  CE+   +   +             EL++   D      L
Sbjct: 5   LDLQVASAAPDLPSEAQFRAWCELALRQRPES-------------ELTIRLVDEAEGLEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D  TNVLSF  A    +     +LGD+V+   ++  EA    K  + H  HL+
Sbjct: 52  NSTYRHKDYATNVLSF-LADVPDELLDIPLLGDLVICAPVVAREALEQRKPLQAHWAHLV 110

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 111 IHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 151


>gi|167585514|ref|ZP_02377902.1| hypothetical protein BuboB_09264 [Burkholderia ubonensis Bu]
          Length = 259

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +   + + GD   +R  C     K ++  I+   F      +L++ F       
Sbjct: 110 PELDLAVQYGDEITGD---VRKACPK--RKLIAEWIAPALFAD---AQLTVRFVGEEEGR 161

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +LN  YR  D PTNVL+F    A  +     ++GD+VL   ++E EA   GK  + H  H
Sbjct: 162 SLNDSYRHKDYPTNVLTF----AYDEAPDGTVIGDLVLCCPVVEKEAREQGKPLDAHYAH 217

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY
Sbjct: 218 LLVHGVLHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPY 258


>gi|238795392|ref|ZP_04638907.1| metalloprotease [Yersinia mollaretii ATCC 43969]
 gi|238720511|gb|EEQ12312.1| metalloprotease [Yersinia mollaretii ATCC 43969]
          Length = 127

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 2/117 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++
Sbjct: 6   QAVSEVTIRLVDEAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVV 63

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 64  EQEAVEQEKALFAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 120


>gi|145572766|sp|Q1BTS1|RRMF_BURCA RecName: Full=Probable rRNA maturation factor
 gi|145572773|sp|A0KAB8|RRMF_BURCH RecName: Full=Probable rRNA maturation factor
          Length = 172

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 89/164 (54%), Gaps = 14/164 (8%)

Query: 9   PR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           PR L+L ++V+   +GDEI       +   K ++  I    F      +L++ F   +  
Sbjct: 20  PRALELDLSVQ---YGDEITSDVRKTLPKRKLIAEWIEPALFAS---AQLTVRFVGENEG 73

Query: 68  ETLNFEYRGIDKPTNVLSFPTAF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            TLN  YR  D PTNVL+F  A+ A+ DG    ++GD+VL   ++E EA+  GK    H 
Sbjct: 74  RTLNAGYRHKDYPTNVLTF--AYDAAPDGT---VIGDLVLCCPVVEKEAHDQGKPLAAHY 128

Query: 127 VHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 129 AHLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 172


>gi|217972291|ref|YP_002357042.1| putative metalloprotease [Shewanella baltica OS223]
 gi|254799938|sp|B8E6K8|RRMF_SHEB2 RecName: Full=Probable rRNA maturation factor
 gi|217497426|gb|ACK45619.1| protein of unknown function UPF0054 [Shewanella baltica OS223]
          Length = 153

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 2/115 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++   DS   + LN  YRG DKPTNVLSFP  F +       +LGD+V+   ++E E
Sbjct: 39  AELTIRIVDSRESQMLNSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           A    K  E H  H+++HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 97  AREQQKTLEAHWAHMVVHGCLHLLGYDHIEDEEAEEMESLETQLIEGLGFTDPYK 151


>gi|256545613|ref|ZP_05472971.1| metalloprotease [Anaerococcus vaginalis ATCC 51170]
 gi|256398690|gb|EEU12309.1| metalloprotease [Anaerococcus vaginalis ATCC 51170]
          Length = 164

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 6/121 (4%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCS-----SLMLGD 103
           + E   E+SL F D  +I  LN ++R ID+ T+VLSFP   F + D  +      LMLGD
Sbjct: 42  IDEKKCEISLSFVDEEKIRQLNKDFRSIDRVTDVLSFPIEDFFNEDRENILEKPYLMLGD 101

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +V+  ++   +A+ LG  FE  +++L  H  LHLLGYDH++D D  +M   E+ ++++LG
Sbjct: 102 VVICLDVARKQADDLGHSFEREVMYLTCHSILHLLGYDHIEDDDKKIMRKREKEVMKNLG 161

Query: 164 I 164
           +
Sbjct: 162 V 162


>gi|255319764|ref|ZP_05360969.1| putative metalloprotease [Acinetobacter radioresistens SK82]
 gi|262380298|ref|ZP_06073452.1| metal-dependent hydrolase [Acinetobacter radioresistens SH164]
 gi|255303083|gb|EET82295.1| putative metalloprotease [Acinetobacter radioresistens SK82]
 gi|262297744|gb|EEY85659.1| metal-dependent hydrolase [Acinetobacter radioresistens SH164]
          Length = 159

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 8/162 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L ++++      E+ L+      + K V     +   VK++  E+ +   D  + + L
Sbjct: 1   MKLSLSLQQTFVAPELVLKR----AYLKKVIETTLRHLDVKQD-CEIGIACVDLDQSQQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N EYR  DKPTNVLSFP+          ++  LGD+V+   ++  EA    K    H  H
Sbjct: 56  NLEYRRKDKPTNVLSFPSEIPEEILPMLAARPLGDLVICIPVVLQEAAEQQKVPVEHFTH 115

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           +++HG LHLLGYDH + D+DA  ME LE  IL  LG+N+PY+
Sbjct: 116 MLVHGTLHLLGYDHEISDEDADEMEALEIEILAKLGLNNPYQ 157


>gi|289675769|ref|ZP_06496659.1| putative metalloprotease [Pseudomonas syringae pv. syringae FF5]
 gi|330895568|gb|EGH27876.1| metal-binding heat shock protein [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330976850|gb|EGH76881.1| metal-binding heat shock protein [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 166

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E +   DE   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQIASETSA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NNTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSIDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|192359229|ref|YP_001982117.1| hypothetical protein CJA_1637 [Cellvibrio japonicus Ueda107]
 gi|254800588|sp|B3PER3|RRMF_CELJU RecName: Full=Probable rRNA maturation factor
 gi|190685394|gb|ACE83072.1| hypothetical protein CJA_1637 [Cellvibrio japonicus Ueda107]
          Length = 177

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 2/115 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+S+   D+     LN EYR  D  TNVLSFP            +LGD+V+   ++E E
Sbjct: 39  AEVSVYIVDTDEGRDLNREYRERDYATNVLSFPADIPPE--VEIPLLGDLVVCAPVVEHE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           A+   K  + H  H++IHG LHLLGYDH+D+ +A  ME LE  +L  LG  DPY+
Sbjct: 97  ADEQHKPLDAHWAHMLIHGSLHLLGYDHIDNDEAETMEALETQLLARLGYADPYD 151


>gi|171321299|ref|ZP_02910261.1| protein of unknown function UPF0054 [Burkholderia ambifaria MEX-5]
 gi|171093426|gb|EDT38609.1| protein of unknown function UPF0054 [Burkholderia ambifaria MEX-5]
          Length = 261

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 87/168 (51%), Gaps = 16/168 (9%)

Query: 6   VNLPR-LDLQIAVENALWGDEI--HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
            N PR L+  ++V+   +GDEI   +R  C     K ++  I    F   +  +L++ F 
Sbjct: 106 ANEPRELEFDLSVQ---YGDEITGDVRKACPK--RKLIAEWIEPALF---SSAQLTVRFV 157

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
                 TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA+  GK  
Sbjct: 158 GEEEGRTLNDGYRHKDYPTNVLTF----AYDPAPDGTVIGDLVLCCPVVEKEAHEQGKPL 213

Query: 123 ENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
             H  HL++HG LH  GYDH   D+DA  ME LE +IL  LG  +PY+
Sbjct: 214 AAHYAHLLVHGALHAQGYDHETSDEDAAEMEALEVAILAKLGFPNPYQ 261


>gi|254419922|ref|ZP_05033646.1| conserved hypothetical protein TIGR00043, putative [Brevundimonas
           sp. BAL3]
 gi|196186099|gb|EDX81075.1| conserved hypothetical protein TIGR00043, putative [Brevundimonas
           sp. BAL3]
          Length = 154

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 5/113 (4%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++ TD   +  LN  +R  D+PTNVLSFP   +++       LGDIVLAY +   EA   
Sbjct: 39  VLLTDDEAVRELNARFRDKDRPTNVLSFPAPESAAP-----HLGDIVLAYGVCASEAQAQ 93

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +HL HL++HG LHLLG DH DD +A  ME  ER IL +LG++DPY  D
Sbjct: 94  GKTLSDHLSHLVVHGVLHLLGRDHEDDAEAEEMEAEEREILAELGVSDPYAAD 146


>gi|330944991|gb|EGH46777.1| metal-binding heat shock protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 166

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E +   DE   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQIASETSA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NNTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSIDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|300113053|ref|YP_003759628.1| hypothetical protein Nwat_0337 [Nitrosococcus watsonii C-113]
 gi|299538990|gb|ADJ27307.1| protein of unknown function UPF0054 [Nitrosococcus watsonii C-113]
          Length = 153

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 68/114 (59%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++  TD +    LN  YR  +  TN+LSFP    S       +LGD+++   ++  EA
Sbjct: 38  EVTIRVTDENEAAELNRRYRRKEGATNILSFPFEIPSCVPFDIPLLGDLIICAPVVAREA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               K+ ++H  HL++HG LHLLG+DH  + +A  ME LE +ILE LG +DPYE
Sbjct: 98  LEQAKKEQDHWAHLVVHGVLHLLGFDHQQEVEAQQMEALEVTILESLGYSDPYE 151


>gi|218666487|ref|YP_002425087.1| conserved hypothetical protein TIGR00043 [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218518700|gb|ACK79286.1| conserved hypothetical protein TIGR00043 [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 158

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----MLGDIVLA 107
           + I ELSL F     +  LN  YR    PTN LSFP      D    L    +LGDIV+A
Sbjct: 37  DRIRELSLTFVGDAEMAALNEGYRHKAAPTNCLSFP-----QDALPVLFRRDLLGDIVIA 91

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
             ++  EA   GK   +H  HL+IH  LHLLGYDH    DA  ME LE  +L ++G+ DP
Sbjct: 92  PAVVGREAAAQGKSLRDHYRHLLIHSTLHLLGYDHELAADAQEMEALETRLLAEMGVADP 151

Query: 168 Y 168
           Y
Sbjct: 152 Y 152


>gi|120597877|ref|YP_962451.1| putative metalloprotease [Shewanella sp. W3-18-1]
 gi|146293951|ref|YP_001184375.1| putative metalloprotease [Shewanella putrefaciens CN-32]
 gi|145572750|sp|A1RGV2|RRMF_SHESW RecName: Full=Probable rRNA maturation factor
 gi|166200358|sp|A4Y9E3|RRMF_SHEPC RecName: Full=Probable rRNA maturation factor
 gi|120557970|gb|ABM23897.1| protein of unknown function UPF0054 [Shewanella sp. W3-18-1]
 gi|145565641|gb|ABP76576.1| protein of unknown function UPF0054 [Shewanella putrefaciens CN-32]
 gi|319427328|gb|ADV55402.1| protein of unknown function UPF0054 [Shewanella putrefaciens 200]
          Length = 153

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 2/115 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++   DS   + LN  YRG DKPTNVLSFP  F +       +LGD+V+   ++E E
Sbjct: 39  AELTIRIVDSRESQMLNSTYRGKDKPTNVLSFP--FEAPAEIELPLLGDLVICAAVVENE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           A    K  E H  H+++HG LHLLGYDH++D++A  ME LE  ++E LG  +PY+
Sbjct: 97  AREQNKTLEAHWAHMVVHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTNPYK 151


>gi|165976379|ref|YP_001651972.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251112|ref|ZP_07337298.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|165876480|gb|ABY69528.1| hypothetical protein APJL_0970 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302650122|gb|EFL80292.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 163

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 89/163 (54%), Gaps = 8/163 (4%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P +DLQIA EN+     +   TL       A++       F +    E+++   D  
Sbjct: 1   MTTPMIDLQIACENSENLPSLEQLTLW---VQTALAYEAQTEDFPE---TEMTIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESH 112

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL IHG LHLLGYDH++D++A  MEGLE  I++ LG  DPY
Sbjct: 113 WAHLAIHGTLHLLGYDHIEDEEAEEMEGLETEIMQKLGFADPY 155


>gi|206559302|ref|YP_002230063.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           cenocepacia J2315]
 gi|198035340|emb|CAR51215.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 258

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 14/164 (8%)

Query: 9   PR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           PR L+L ++V+   +GDEI       +   K ++  +    F      +L++ F   +  
Sbjct: 106 PRALELDLSVQ---YGDEITSDVRKTLPKRKLIAEWLEPALFAS---AQLTVRFVGENEG 159

Query: 68  ETLNFEYRGIDKPTNVLSFPTAF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            TLN  YR  D PTNVL+F  A+ A+ DG    ++GD+VL   ++E EA+  GK    H 
Sbjct: 160 RTLNAGYRHKDYPTNVLTF--AYDAAPDGT---VIGDLVLCCPVVEKEAHDQGKPLMAHY 214

Query: 127 VHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 215 AHLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 258


>gi|238755073|ref|ZP_04616421.1| metalloprotease [Yersinia ruckeri ATCC 29473]
 gi|238706777|gb|EEP99146.1| metalloprotease [Yersinia ruckeri ATCC 29473]
          Length = 127

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA
Sbjct: 10  EVTIRVVDEAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEA 67

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 68  VEQNKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQGLGYPDPY 120


>gi|126175463|ref|YP_001051612.1| putative metalloprotease [Shewanella baltica OS155]
 gi|166229097|sp|A3D7N0|RRMF_SHEB5 RecName: Full=Probable rRNA maturation factor
 gi|125998668|gb|ABN62743.1| protein of unknown function UPF0054 [Shewanella baltica OS155]
          Length = 153

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 2/115 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++   D+   + LN  YRG DKPTNVLSFP  F +       +LGD+V+   ++E E
Sbjct: 39  AELTIRIVDTRESQMLNSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           A    K  E H  H+++HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 97  AREQQKTLEAHWAHMVVHGCLHLLGYDHIEDEEAEEMESLETQLIEGLGFTDPYK 151


>gi|17545248|ref|NP_518650.1| metalloprotease [Ralstonia solanacearum GMI1000]
 gi|17427539|emb|CAD14057.1| hypothetical protein RSc0529 [Ralstonia solanacearum GMI1000]
          Length = 255

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 61/114 (53%), Gaps = 4/114 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            +L++ F D     TLN  YRG D  TNVL+F  A    D  ++    DIVL   ++E E
Sbjct: 143 AQLNVRFVDEEEGRTLNHTYRGKDYATNVLTFSYAETEDDPVAA----DIVLCCPVVEQE 198

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK    H  HLI+HG LH  GYDH D   A  MEG+E  +L  LG  DPY
Sbjct: 199 AKDQGKPLRAHYAHLIVHGALHAQGYDHEDPAQAEEMEGIETEVLAGLGFPDPY 252


>gi|237746579|ref|ZP_04577059.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229377930|gb|EEO28021.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 176

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 25/139 (17%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------------------------TAF 90
            +++L F D+     LN +YRG D  TNVL+FP                        T+ 
Sbjct: 39  ADITLRFVDAEEGRALNRDYRGKDYATNVLTFPYDDMEAFDLSAIGLSGDDPAPLELTSL 98

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           A+S G  +    DIVL  +++E EA    K  + H  HL++HG LH  GYDH +D +A  
Sbjct: 99  ATSPGAQTAR-ADIVLCTDVLEAEAKEQAKSLDAHAAHLVVHGVLHAQGYDHTNDAEAGE 157

Query: 151 MEGLERSILEDLGINDPYE 169
           ME LE  IL  LG  DPY 
Sbjct: 158 METLETKILAKLGYPDPYR 176


>gi|90022942|ref|YP_528769.1| lipoate-protein ligase B [Saccharophagus degradans 2-40]
 gi|123090090|sp|Q21FH2|RRMF_SACD2 RecName: Full=Probable rRNA maturation factor
 gi|89952542|gb|ABD82557.1| protein of unknown function UPF0054 [Saccharophagus degradans 2-40]
          Length = 149

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 2/116 (1%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           N  ELS+   D    + LN +YRG DK TNVLSFP      DG    +LGD+V+  +++ 
Sbjct: 36  NEAELSIRIVDEDESQALNLQYRGKDKSTNVLSFPCEL--PDGVELPLLGDLVICAQVVA 93

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GK    H  H+++HG LHLLGYDH++D +A  ME +E  +L +LG  +PY
Sbjct: 94  KEALEQGKLLHAHWAHMVVHGTLHLLGYDHIEDGEAEEMEAIEIQVLLELGYPNPY 149


>gi|325267029|ref|ZP_08133699.1| metal-dependent hydrolase [Kingella denitrificans ATCC 33394]
 gi|324981529|gb|EGC17171.1| metal-dependent hydrolase [Kingella denitrificans ATCC 33394]
          Length = 167

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYE 109
            ELSLV  D       N +YRG D  TNVLSF      + FA +      + GD+++  +
Sbjct: 52  AELSLVLLDEEEARAYNRDYRGKDYATNVLSFALNEGESMFADTQDT---LYGDLIICPQ 108

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++  EA   GK   +H  HL+IHG LHL+G+DH++D+DA  ME LE  +L  L I +PY
Sbjct: 109 VVAREAAEQGKPLHHHFAHLVIHGTLHLMGFDHIEDEDADQMEALEIELLRQLNIPNPY 167


>gi|299067910|emb|CBJ39124.1| Putative metalloprotease [Ralstonia solanacearum CMR15]
          Length = 255

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 61/114 (53%), Gaps = 4/114 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            +L++ F D     TLN  YRG D  TNVL+F  A    D  ++    DIVL   ++E E
Sbjct: 143 AQLNVRFVDEEEGRTLNHTYRGKDYATNVLTFSYAETEDDPVAA----DIVLCCPVVEKE 198

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK    H  HLI+HG LH  GYDH D   A  MEG+E  +L  LG  DPY
Sbjct: 199 AKDQGKPLRAHYAHLIVHGALHAQGYDHEDPAQAEEMEGIETEVLAGLGFPDPY 252


>gi|146310843|ref|YP_001175917.1| putative metalloprotease [Enterobacter sp. 638]
 gi|166977725|sp|A4W836|RRMF_ENT38 RecName: Full=Probable rRNA maturation factor
 gi|145317719|gb|ABP59866.1| protein of unknown function UPF0054 [Enterobacter sp. 638]
          Length = 155

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 90/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E+     E       E  F K +  +I +  F +E+  E+++   D      L
Sbjct: 6   LDLQLACEDNSGLPE-------ESQFQKWLDAVIPQ--FQEES--EVTIRVVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  + H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAKEQQKPLDAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH++D++A  ME LE  I+  LG  DPY
Sbjct: 113 IHGSLHLLGYDHIEDEEAEEMESLETEIMLALGYEDPY 150


>gi|90581603|ref|ZP_01237394.1| hypothetical protein VAS14_00556 [Vibrio angustum S14]
 gi|90437186|gb|EAS62386.1| hypothetical protein VAS14_00556 [Vibrio angustum S14]
          Length = 154

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN EYRG D+PTNVLSFP  F +  G    +LGD+++  +++E E
Sbjct: 38  AEVTIRLVDEKESHALNLEYRGKDRPTNVLSFP--FEAPPGMELELLGDLIICRQVVEKE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K  + H  H+++HG LHLLGYDH++D++A  MEGLE  I++++G  DPY
Sbjct: 96  ALEQNKPLKAHWAHMVVHGSLHLLGYDHIEDEEAEEMEGLETEIMQNMGFVDPY 149


>gi|114046573|ref|YP_737123.1| putative metalloprotease [Shewanella sp. MR-7]
 gi|123131666|sp|Q0HXT9|RRMF_SHESR RecName: Full=Probable rRNA maturation factor
 gi|113888015|gb|ABI42066.1| protein of unknown function UPF0054 [Shewanella sp. MR-7]
          Length = 153

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDL + V+ A   D +       +    A+ N + +         EL++   D+   + L
Sbjct: 3   LDLALDVQYATASDYLPSEEQFSLWVKTAIGNSMEQA--------ELTIRIVDARESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENEAREQDKILEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTDPYK 151


>gi|253999827|ref|YP_003051890.1| hypothetical protein Msip34_2121 [Methylovorus sp. SIP3-4]
 gi|253986506|gb|ACT51363.1| protein of unknown function UPF0054 [Methylovorus sp. SIP3-4]
          Length = 155

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL+L   D      LN +YRG D  TNVL+FP            ++GDI+L   ++  E
Sbjct: 35  TELALRIVDEDEGRALNRDYRGKDYATNVLTFPLTEEPH------LMGDIILCAPVVARE 88

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           A   GK  E H  HL +HG LHL GYDH  +  A +MEGLE  I+  LG +DPY  +
Sbjct: 89  AAEQGKPIEAHYAHLTVHGVLHLHGYDHETEPQAELMEGLETEIVTKLGYSDPYAAE 145


>gi|331014757|gb|EGH94813.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 166

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E     DE   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQVASETPA-PDEALFRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|220935458|ref|YP_002514357.1| metal-dependent hydrolase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996768|gb|ACL73370.1| metal-dependent hydrolase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 149

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 2/100 (2%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR    PTNVLSFP  F +    +   LGD+V+   ++  EA   GK  E H  H+
Sbjct: 52  LNGTYRHKQGPTNVLSFP--FEAPPEFAEGHLGDLVICAPVVLREAAEQGKTAEAHWAHM 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +IHG LHL G+DH++D +A  ME LE+ IL  LG  +PYE
Sbjct: 110 VIHGMLHLQGHDHIEDAEAARMEALEKEILSGLGYENPYE 149


>gi|313201801|ref|YP_004040459.1| hypothetical protein MPQ_2072 [Methylovorus sp. MP688]
 gi|312441117|gb|ADQ85223.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 150

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL+L   D      LN +YRG D  TNVL+FP            ++GDI+L   ++  E
Sbjct: 30  TELALRIVDEDEGRALNRDYRGKDYATNVLTFPLTEEPH------LMGDIILCAPVVARE 83

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           A   GK  E H  HL +HG LHL GYDH  +  A +MEGLE  I+  LG +DPY  +
Sbjct: 84  AAEQGKPIEAHYAHLTVHGVLHLHGYDHETEPQAELMEGLETEIVTKLGYSDPYAAE 140


>gi|167630510|ref|YP_001681009.1| hypothetical protein HM1_2448 [Heliobacterium modesticaldum Ice1]
 gi|238687861|sp|B0TAE8|RRMF_HELMI RecName: Full=Probable rRNA maturation factor
 gi|167593250|gb|ABZ84998.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
          Length = 166

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 10/138 (7%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--------F 90
           A + L   GY +++   E+SLV T+  +I  LN EYR ID+PT+VLSF           F
Sbjct: 30  AFACLEEVGYPLED--TEISLVLTNDEKIRRLNAEYRNIDQPTDVLSFAMEEGLDDEADF 87

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
              D  +  +LGDI+++ E  E +A   G   E  +  L +HG LHLLGYDH D++    
Sbjct: 88  HFDDPTAGKVLGDIIISVETAERQAQEYGHSLEREMGFLFVHGMLHLLGYDHCDEEQRSR 147

Query: 151 MEGLERSILEDLGINDPY 168
           M  LE  IL + G+   +
Sbjct: 148 MRALEEKILRNQGLQREW 165


>gi|144899563|emb|CAM76427.1| Uncharacterized protein family UPF005 [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 172

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 12/165 (7%)

Query: 11  LDLQIAVENALWGDEI-HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +D+ I++E+  W   +     LC  +    ++ L + G       VE+S+V T    +  
Sbjct: 5   IDVAISIEDEAWTQALPGAEELCRTMV---LATLQAAGGDFDGPPVEVSVVLTSDTAVHA 61

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGC-----SSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           LN ++RG DKPTNVLSF  A    D       + ++LGD+++AY +   EA   GK   +
Sbjct: 62  LNRDWRGQDKPTNVLSF--AGLDDDEAPVVVGAPVLLGDVIMAYGVCTQEARDQGKTLAH 119

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEG-LERSILEDLGINDPY 168
           H  HL++HG LHLLG+DH +D+        LE  IL   GI DPY
Sbjct: 120 HAAHLVVHGTLHLLGWDHEEDETEAEEMERLETVILSGFGIADPY 164


>gi|223041409|ref|ZP_03611612.1| putative metal-dependent hydrolase [Actinobacillus minor 202]
 gi|190692223|gb|ACE87879.1| putative metal-dependent hydrolase [Actinobacillus minor 202]
          Length = 163

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 92/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE-NIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F   V   ++     +E    E+++   D 
Sbjct: 1   MTTPIIDLQIACENSE-----NLPSLEQ--FMLWVQTALAYEAQTEEFPETEMTIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+
Sbjct: 54  AESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D++A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDEEAEEMEGLETEIMQKLGFADPY 155


>gi|114571574|ref|YP_758254.1| hypothetical protein Mmar10_3035 [Maricaulis maris MCS10]
 gi|122314893|sp|Q0AK77|RRMF_MARMM RecName: Full=Probable rRNA maturation factor
 gi|114342036|gb|ABI67316.1| protein of unknown function UPF0054 [Maricaulis maris MCS10]
          Length = 160

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 77/152 (50%), Gaps = 11/152 (7%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           VE+  W        L E   + A   L  +   V      ++++      + ++N ++RG
Sbjct: 8   VEDDAWSSLAGKTRLVEEAISAACKELPDRTPGV------VAILLGGDEGVASMNAQFRG 61

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
               TNVLSFP    + +      LGDI LA+ +I+ EA        +HL HLIIHGFLH
Sbjct: 62  KAGATNVLSFPAGEHADN-----HLGDIALAHGVIQREAEDRDIALADHLRHLIIHGFLH 116

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L G+DH  D +A VME +ER  L  LG+ DPY
Sbjct: 117 LQGFDHQQDDEAEVMEAIERRALARLGVADPY 148


>gi|46577519|sp|Q8Y208|RRMF_RALSO RecName: Full=Probable rRNA maturation factor
          Length = 187

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 66/131 (50%), Gaps = 7/131 (5%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           K +   I+   F      +L++ F D     TLN  YRG D  TNVL+F  A    D  +
Sbjct: 61  KDIEAWIAPALFAD---AQLNVRFVDEEEGRTLNHTYRGKDYATNVLTFSYAETEDDPVA 117

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           +    DIVL   ++E EA   GK    H  HLI+HG LH  GYDH D   A  MEG+E  
Sbjct: 118 A----DIVLCCPVVEQEAKDQGKPLRAHYAHLIVHGALHAQGYDHEDPAQAEEMEGIETE 173

Query: 158 ILEDLGINDPY 168
           +L  LG  DPY
Sbjct: 174 VLAGLGFPDPY 184


>gi|255262455|ref|ZP_05341797.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
 gi|255104790|gb|EET47464.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
          Length = 163

 Score = 91.3 bits (225), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 12/148 (8%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AF 90
             A   ++ +     +  ++  +S++  D  RI+ LN ++R  D  TNVLS+P     A 
Sbjct: 16  ALASRAADAVFDAVGLDRDVWLVSVLACDDARIQVLNADFREKDGATNVLSWPAQDLAAV 75

Query: 91  ASSDGCSSLM--------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
            + D   + +        LGD+ ++++    EA     +F++H+ HL+IHG LHLLGYDH
Sbjct: 76  GAGDKPDAPVPDPMGESELGDVAISFDTCAREAAEAACDFDDHVAHLMIHGTLHLLGYDH 135

Query: 143 VDDKDACVMEGLERSILEDLGINDPYEV 170
           + D DA +ME LE  IL  LG+ DPY V
Sbjct: 136 IRDADATLMETLEVQILGKLGLCDPYTV 163


>gi|238752612|ref|ZP_04614085.1| metalloprotease [Yersinia rohdei ATCC 43380]
 gi|238709203|gb|EEQ01448.1| metalloprotease [Yersinia rohdei ATCC 43380]
          Length = 117

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA 
Sbjct: 1   MTIRIVDEAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAI 58

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
              K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 59  EQEKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 110


>gi|330987618|gb|EGH85721.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 166

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E +   D+   R  CE+            G   +    EL++   D +    L
Sbjct: 4   LDLQIASETSA-PDKARFRLWCEM------------GLRQRSADSELTIRLVDENEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG   PY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPAPYAED 150


>gi|330811910|ref|YP_004356372.1| hypothetical protein PSEBR_a4946 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380018|gb|AEA71368.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 152

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E+A    E   R  CE+   +  ++             EL++   D      L
Sbjct: 4   LDLQVACEHAA-PSEAQFRQWCELALRQRSAD------------SELTIRLVDEPEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA    K  E H  HL+
Sbjct: 51  NHTWRQKDYATNVLSFP-ADVPDELLDIPLLGDLVICVPVVEREAAEQDKTPEAHWAHLV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH++D +A  ME LER++L +LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIEDDEAEEMEALERTLLAELGHPDPYAGD 150


>gi|257092863|ref|YP_003166504.1| hypothetical protein CAP2UW1_1247 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045387|gb|ACV34575.1| protein of unknown function UPF0054 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 144

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 7/117 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++++ F D+     LN +YR  D  TNVLSFP A         ++ GD+VL   ++  EA
Sbjct: 33  QITVRFVDADEARRLNRDYRHRDYATNVLSFPYAR------EPVVCGDLVLCAPVVAREA 86

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYEVD 171
              GK  E H  HLI+HG LHL GYDH    + A  ME  ER +L  LG  DPY ++
Sbjct: 87  AEQGKPLEAHYAHLIVHGLLHLQGYDHETSARQAAEMESRERRVLHALGYPDPYAME 143


>gi|170719818|ref|YP_001747506.1| putative metalloprotease [Pseudomonas putida W619]
 gi|229890245|sp|B1J201|RRMF_PSEPW RecName: Full=Probable rRNA maturation factor
 gi|169757821|gb|ACA71137.1| protein of unknown function UPF0054 [Pseudomonas putida W619]
          Length = 157

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ A + A   D+  LR  CE+   +  ++             E+++   D      L
Sbjct: 4   LDLQRATDAAT-PDDAALRAWCELALRQRSAD------------SEMTIRLVDEAEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D  TNVLSFP A    +     +LGD+V+   ++E EA   GK  + H  HL+
Sbjct: 51  NHTYRHKDYATNVLSFP-ADVPDELLDIPLLGDLVICVPVVEREAAEQGKSLQAHWAHLV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH++D +A  ME LER +L +LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIEDDEAEEMEALERELLAELGHPDPYADD 150


>gi|170703554|ref|ZP_02894307.1| protein of unknown function UPF0054 [Burkholderia ambifaria
           IOP40-10]
 gi|170131542|gb|EDT00117.1| protein of unknown function UPF0054 [Burkholderia ambifaria
           IOP40-10]
          Length = 261

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 86/165 (52%), Gaps = 16/165 (9%)

Query: 9   PR-LDLQIAVENALWGDEI--HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           PR L+L ++V+   +GDEI   +R  C     K ++  I    F   +  +L++ F    
Sbjct: 109 PRELELDLSVQ---YGDEITGDVRKACPKR--KLIAEWIEPALF---SSAQLTVRFVGEE 160

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA   GK    H
Sbjct: 161 EGRTLNDGYRHKDYPTNVLTF----AYDPAPDGTVIGDLVLCCPVVEKEAQEQGKPLAAH 216

Query: 126 LVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
             HL++HG LH  GYDH   ++DA  ME LE +IL  LG  +PY+
Sbjct: 217 YAHLLVHGALHAQGYDHETSEEDAAEMEALEVAILAKLGFPNPYQ 261


>gi|89074962|ref|ZP_01161407.1| hypothetical protein SKA34_20817 [Photobacterium sp. SKA34]
 gi|89049201|gb|EAR54765.1| hypothetical protein SKA34_20817 [Photobacterium sp. SKA34]
          Length = 154

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D     TLN EYR  D+PTNVLSFP  F +  G    +LGD+++  +++E E
Sbjct: 38  AEVTIRLVDEKESHTLNLEYRDKDRPTNVLSFP--FEAPPGVELELLGDLIICRQVVEKE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K  + H  H+++HG LHLLGYDH++D++A  ME LE  I++++G  DPY
Sbjct: 96  ALEQNKPLKAHWAHMVVHGSLHLLGYDHIEDEEAEEMENLETEIMQNMGFVDPY 149


>gi|295695438|ref|YP_003588676.1| protein of unknown function UPF0054 [Bacillus tusciae DSM 2912]
 gi|295411040|gb|ADG05532.1| protein of unknown function UPF0054 [Bacillus tusciae DSM 2912]
          Length = 162

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 4/114 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----MLGDIVLAYEI 110
            E+S+V  D  RI  LN +YRG+D+PT+VLSF       +   +     +LGDIV++ E 
Sbjct: 40  AEVSVVLVDDERIHELNRDYRGVDRPTDVLSFAMREGEGEPVQTEEGRELLGDIVISVET 99

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            E +AN  G      L  L +HGFLHLLGYDH   +   VM G +  +L  LG+
Sbjct: 100 AERQANQYGHSLRRELAFLAVHGFLHLLGYDHQSPEQERVMFGKQEEVLSALGL 153


>gi|146308796|ref|YP_001189261.1| putative metalloprotease [Pseudomonas mendocina ymp]
 gi|166990901|sp|A4XYW3|RRMF_PSEMY RecName: Full=Probable rRNA maturation factor
 gi|145576997|gb|ABP86529.1| protein of unknown function UPF0054 [Pseudomonas mendocina ymp]
          Length = 151

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 16/162 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A +     DE  LR  CE+   +  ++             EL++   D      L
Sbjct: 4   LDLQLASDGQH-PDEAQLRRWCELALRQRTAD------------SELTIRLVDEEEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           N  +R  D  TNVLSFP      DG   + +LGD+V+   ++E EA   GK  E H  HL
Sbjct: 51  NRTWRHKDYATNVLSFPAEI--PDGILDIPLLGDLVICVPVLEREAAEQGKTLEAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+++ +A  ME LER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIEEDEALEMEELERQLLAELGHPDPYAGD 150


>gi|227485439|ref|ZP_03915755.1| metal-dependent hydrolase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236569|gb|EEI86584.1| metal-dependent hydrolase [Anaerococcus lactolyticus ATCC 51172]
          Length = 152

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 2/112 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--GCSSLMLGDIVLAYEIIE 112
            E+SL   D   I  LN EYR +D+PT+VLSFP      D  G S  +LGDIV+  ++ E
Sbjct: 39  AEVSLSIVDMETIHRLNKEYREVDRPTDVLSFPMDEEGYDNEGNSIFLLGDIVICLDVAE 98

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +A   G   E  +++LI H  LHLLGYDH+++ D   M   E+ ++++LG+
Sbjct: 99  NQAKDFGHSLEREMMYLICHSTLHLLGYDHIEEDDKLEMRSREKEVMKNLGV 150


>gi|77461173|ref|YP_350680.1| putative metalloprotease [Pseudomonas fluorescens Pf0-1]
 gi|123603159|sp|Q3K6B5|RRMF_PSEPF RecName: Full=Probable rRNA maturation factor
 gi|77385176|gb|ABA76689.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 164

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E A    E   R  CE+   +  ++             E+++   D      L
Sbjct: 4   LDLQIATE-APAPTEAEFRQWCELALRQRTAD------------SEMTIRLVDEDEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA   GKE + H  HL+
Sbjct: 51  NHTWRHKDYATNVLSFP-AEVPDEFLDIPLLGDLVICVAVVEREATEQGKELKAHWAHLV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER +L +LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEALERELLAELGYPDPYADD 150


>gi|94498013|ref|ZP_01304577.1| predicted metal-dependent hydrolase [Sphingomonas sp. SKA58]
 gi|94422596|gb|EAT07633.1| predicted metal-dependent hydrolase [Sphingomonas sp. SKA58]
          Length = 169

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 8/147 (5%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP- 87
           ++L +     A+++    G+       E+++  T    +  LN  YR  DKPTNVLSFP 
Sbjct: 18  QSLADRAVTAAIAHSPYAGFAAAPTHYEIAVKLTSDEEVHGLNRAYRDKDKPTNVLSFPM 77

Query: 88  ------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
                  A A++D    ++LGDIVLA  +   EA   G    +H  HLI+HG  HLLGYD
Sbjct: 78  VQDDLLQATANTDD-GEVLLGDIVLAEGVCAAEAADKGISILDHATHLIVHGTFHLLGYD 136

Query: 142 HVDDKDACVMEGLERSILEDLGINDPY 168
           H+DD +A  ME LE + L  LG+ DPY
Sbjct: 137 HMDDAEAEAMEALEIAALASLGLADPY 163


>gi|83746118|ref|ZP_00943173.1| Hypothetical Metal-Binding Protein [Ralstonia solanacearum UW551]
 gi|207742382|ref|YP_002258774.1| hypothetical protein RSIPO_00569 [Ralstonia solanacearum IPO1609]
 gi|83727301|gb|EAP74424.1| Hypothetical Metal-Binding Protein [Ralstonia solanacearum UW551]
 gi|206593772|emb|CAQ60699.1| hypothetical protein RSIPO_00569 [Ralstonia solanacearum IPO1609]
          Length = 254

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            +L++ F D     TLN  YRG D  TNVL+F  A    D  S+    D+VL   ++E E
Sbjct: 142 AQLNVRFVDEEEGRTLNRTYRGKDYATNVLTFSYAETEHDPVSA----DVVLCCPVVEKE 197

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  HLI+HG LH  GYDH +  +A  MEG+E ++L +LG  DPY
Sbjct: 198 AKDQDKPLRAHYAHLIVHGALHAQGYDHENPAEAKEMEGIETAVLAELGFPDPY 251


>gi|207727982|ref|YP_002256376.1| hypothetical protein RSMK04405 [Ralstonia solanacearum MolK2]
 gi|206591225|emb|CAQ56837.1| hypothetical protein RSMK04405 [Ralstonia solanacearum MolK2]
          Length = 254

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            +L++ F D     TLN  YRG D  TNVL+F  A    D  S+    D+VL   ++E E
Sbjct: 142 AQLNVRFVDEEEGRTLNRTYRGKDYATNVLTFSYAETEHDPVSA----DVVLCCPVVEKE 197

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  HLI+HG LH  GYDH +  +A  MEG+E ++L +LG  DPY
Sbjct: 198 AKDQDKPLRAHYAHLIVHGALHAQGYDHENPAEAKEMEGIETAVLAELGFPDPY 251


>gi|30250260|ref|NP_842330.1| hypothetical protein NE2333 [Nitrosomonas europaea ATCC 19718]
 gi|46577433|sp|Q82SI9|RRMF_NITEU RecName: Full=Probable rRNA maturation factor
 gi|30181055|emb|CAD86245.1| Uncharacterized protein family UPF0054 [Nitrosomonas europaea ATCC
           19718]
          Length = 164

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 69/134 (51%), Gaps = 13/134 (9%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           +F K V   +SK         E+ +   D    E LN ++RG    TNVL+F       D
Sbjct: 40  LFRKWVKAALSKP-------AEVVIRIVDRQEGEILNRDFRGKSSATNVLTF----VYDD 88

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                +LGDIVL   +I  EA   GK+   H  HL IHG LHL GYDH+ D+DA VME L
Sbjct: 89  DVP--LLGDIVLCAPVICNEAQQQGKDLTAHYAHLTIHGILHLQGYDHIRDEDAVVMESL 146

Query: 155 ERSILEDLGINDPY 168
           E  I+  LG  DPY
Sbjct: 147 ETEIITRLGYPDPY 160


>gi|300692458|ref|YP_003753453.1| metalloprotease [Ralstonia solanacearum PSI07]
 gi|299079518|emb|CBJ52196.1| Putative metalloprotease [Ralstonia solanacearum PSI07]
          Length = 255

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 69/146 (47%), Gaps = 7/146 (4%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           GDE+           K +   I+   F      +L++ F       TLN  YR  D  TN
Sbjct: 114 GDELKAAARKACPKQKDIEAWIAPALFAD---AQLNVRFVGEEEGRTLNRTYRDKDYATN 170

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           VL+F  +    D  S+    DIVL   ++E EA   GK    H  HLI+HG LH  GYDH
Sbjct: 171 VLTFSYSETEDDPVSA----DIVLCCPVVEKEAKDQGKPLRAHYAHLIVHGALHAQGYDH 226

Query: 143 VDDKDACVMEGLERSILEDLGINDPY 168
            D  +A  MEGLE  +L  LG  DPY
Sbjct: 227 EDPAEAKEMEGLETEVLAGLGFPDPY 252


>gi|294670470|ref|ZP_06735350.1| hypothetical protein NEIELOOT_02187 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307749|gb|EFE48992.1| hypothetical protein NEIELOOT_02187 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 172

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 67/124 (54%), Gaps = 11/124 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLA 107
            ++SL+  D       N +YRG D  TNVLSF         A A SDG    + GD+V+ 
Sbjct: 51  ADISLLLLDEEPARACNRDYRGKDYATNVLSFALDEGETMYAPALSDG----LHGDLVIC 106

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
            +++  EA   GK  E H  HL IHG LHL+GYDH++D +A  ME LE  +L  L   DP
Sbjct: 107 PQVVFKEAAEQGKTPEQHFAHLTIHGVLHLMGYDHIEDTEAEEMEALETRLLNQLAYPDP 166

Query: 168 YEVD 171
           Y  D
Sbjct: 167 YSQD 170


>gi|238758021|ref|ZP_04619202.1| metalloprotease [Yersinia aldovae ATCC 35236]
 gi|238703775|gb|EEP96311.1| metalloprotease [Yersinia aldovae ATCC 35236]
          Length = 112

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA    K    H  H+
Sbjct: 9   LNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAIEQEKALLAHWAHM 66

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 67  VVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 105


>gi|219670284|ref|YP_002460719.1| hypothetical protein Dhaf_4278 [Desulfitobacterium hafniense DCB-2]
 gi|254803892|sp|B8FUL3|RRMF_DESHD RecName: Full=Probable rRNA maturation factor
 gi|219540544|gb|ACL22283.1| protein of unknown function UPF0054 [Desulfitobacterium hafniense
           DCB-2]
          Length = 157

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 5/115 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYE 109
            E+SL   D  RI  LN +YRG+D+PT+VLSF      SD    L     +LGDI+++ E
Sbjct: 41  AEVSLTLVDDARIHELNRDYRGVDRPTDVLSFALQEERSDEPDILDYEDHLLGDIIISVE 100

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
               +A   G  FE  LV+L +HG LHLLGYDH++++D   M   E +++  +G+
Sbjct: 101 RARAQAIDYGHSFERELVYLAVHGTLHLLGYDHMEEEDKEEMRRQEEAVMSQIGL 155


>gi|217969296|ref|YP_002354530.1| unkown domain/ metalloprotease fusion protein [Thauera sp. MZ1T]
 gi|217506623|gb|ACK53634.1| protein of unknown function UPF0054 [Thauera sp. MZ1T]
          Length = 274

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 10/108 (9%)

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--------MLGDIVLAYEIIEIEANVLGK 120
            LN +YRG D  TNVL+F  A+A  +    L        + GD+VL   ++  EA   GK
Sbjct: 165 ALNRDYRGKDYATNVLTF--AYAEGEDLPGLPAAAADVPLAGDLVLCVPVVVREAAAQGK 222

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             E H  HL++HG LHL GYDH ++ +A  ME LE +IL +LG  DPY
Sbjct: 223 TLEAHFAHLVVHGMLHLQGYDHENETEAAEMEALETAILRELGYADPY 270


>gi|307252587|ref|ZP_07534481.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306859909|gb|EFM91928.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 159

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E
Sbjct: 40  TEMTIRIVDEAESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKE 97

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
                   E+H  HL IHG LHLLGYDH++D++A  MEGLE  I++ LG  DPY
Sbjct: 98  VEEQQISLESHWAHLAIHGTLHLLGYDHIEDEEAEEMEGLETEIMQKLGFADPY 151


>gi|292493859|ref|YP_003529298.1| hypothetical protein Nhal_3899 [Nitrosococcus halophilus Nc4]
 gi|291582454|gb|ADE16911.1| protein of unknown function UPF0054 [Nitrosococcus halophilus Nc4]
          Length = 153

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 66/114 (57%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D   +  LN+ YR  +  TNVLSFP   ++       +LGD+V+   ++  EA
Sbjct: 38  EVTIRIADEAEVAELNWRYRYKEGATNVLSFPFELSAPLPFQISLLGDLVICAPVVAREA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               KE   H  HL++HG LHLLG+DH  + +A  ME +E +IL+ LG  +PYE
Sbjct: 98  LEHAKEERAHWAHLVVHGVLHLLGFDHQQEAEAQQMEAMEITILKSLGYPNPYE 151


>gi|330505000|ref|YP_004381869.1| putative metalloprotease [Pseudomonas mendocina NK-01]
 gi|328919286|gb|AEB60117.1| putative metalloprotease [Pseudomonas mendocina NK-01]
          Length = 159

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 85/159 (53%), Gaps = 16/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A +     DE  LR  CE+   +  ++             EL++   D      L
Sbjct: 4   LDLQLATDGQH-PDEAQLRRWCELALRQRTAD------------SELTIRLVDEAEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           N  +R  D  TNVLSFP      DG   + +LGD+V+   ++E EA   GK  + H  HL
Sbjct: 51  NHTWRHKDYATNVLSFPAEI--PDGILDIPLLGDLVICVPVVEREAAEQGKALDAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +IHG LHLLGYDH+++ +A  ME LER +L +LG  DPY
Sbjct: 109 VIHGCLHLLGYDHIEEDEALEMEELERQLLAELGHPDPY 147


>gi|94676735|ref|YP_588542.1| hypothetical protein BCI_0064 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|145572748|sp|Q1LU22|RRMF_BAUCH RecName: Full=Probable rRNA maturation factor
 gi|94219885|gb|ABF14044.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 155

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 2/116 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D      LN  YRG +  TNVLSFP  F +      ++LGDI++  +++E EA
Sbjct: 40  EVTIRLVDEAESYNLNKIYRGQNHSTNVLSFP--FKAPSPVKLVLLGDIIICRQVVEREA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
               K  E +  H++IHG LHLLGYDH  +++A  ME LE  I+  LG  +PYE +
Sbjct: 98  QEQNKILEAYWAHMVIHGSLHLLGYDHFIEQNAKKMEYLETKIMHKLGYLNPYETE 153


>gi|307822346|ref|ZP_07652578.1| protein of unknown function UPF0054 [Methylobacter tundripaludum
           SV96]
 gi|307736912|gb|EFO07757.1| protein of unknown function UPF0054 [Methylobacter tundripaludum
           SV96]
          Length = 153

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+ +   D      LN +YR    PTN+LSFP      +G    +LGD+V+   ++E E
Sbjct: 36  TEIVVRIVDEQESAELNEQYRHKSGPTNILSFPVDV--PEGIELDLLGDLVICAPVVEKE 93

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K   +H  H+I+HG LHLLGYDH+DD +A +ME  E +IL  L IN+PY
Sbjct: 94  ALEQDKLLAHHWAHIIVHGVLHLLGYDHIDDDEAELMENKEIAILNKLHINNPY 147


>gi|89895855|ref|YP_519342.1| hypothetical protein DSY3109 [Desulfitobacterium hafniense Y51]
 gi|122481904|sp|Q24SU4|RRMF_DESHY RecName: Full=Probable rRNA maturation factor
 gi|89335303|dbj|BAE84898.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 157

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 5/115 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYE 109
            E+SL   D  RI  LN +YRG+D+PT+VLSF      SD    L     +LGDI+++ E
Sbjct: 41  AEVSLTLVDDARIHELNRDYRGVDRPTDVLSFALQEERSDEPDILDYEDHLLGDIIISVE 100

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
               +A   G  FE  LV+L +HG LHLLGYDH+++ D   M   E +++  +G+
Sbjct: 101 RARAQAIDYGHSFERELVYLAVHGTLHLLGYDHMEEADKEKMRRQEEAVMSQIGL 155


>gi|294012045|ref|YP_003545505.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S]
 gi|292675375|dbj|BAI96893.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S]
          Length = 166

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 78/146 (53%), Gaps = 10/146 (6%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--- 87
           L +     A+++     +   E + E+++  T    +  LN  YR  DKPTNVLSFP   
Sbjct: 20  LAQRAVVAAITHSPYAAFAADEALYEVAVKLTTDEEVHQLNRAYRDKDKPTNVLSFPMVQ 79

Query: 88  -----TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                T   + DG   ++LGDIVLA  +   EA   G    +H  HLI+HG  HLLGYDH
Sbjct: 80  SDLLETTANTDDG--EVLLGDIVLAEGVCAREAAEKGVSVADHATHLIVHGTFHLLGYDH 137

Query: 143 VDDKDACVMEGLERSILEDLGINDPY 168
           ++D +A  ME LE   L  LGI+DPY
Sbjct: 138 MEDAEAEAMEALETQSLISLGISDPY 163


>gi|325276220|ref|ZP_08142019.1| metal-binding heat shock protein [Pseudomonas sp. TJI-51]
 gi|324098649|gb|EGB96696.1| metal-binding heat shock protein [Pseudomonas sp. TJI-51]
          Length = 157

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+Q A + A   D+   R  CE+   +  ++             E+++   D      L
Sbjct: 4   LDIQRATDAAAPSDD-DFRRWCELALRQRSAD------------SEMTIRLVDEAEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D  TNVLSFP A    D     +LGD+V+   ++E EA   GK    H  HL+
Sbjct: 51  NHTYRHKDYATNVLSFP-ADVPDDLLDIPLLGDLVICVAVVEREAAEQGKALNAHWAHLV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  MEGLER +L +LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIDDEEAEEMEGLERELLAELGHPDPYADD 150


>gi|302389485|ref|YP_003825306.1| protein of unknown function UPF0054 [Thermosediminibacter oceani
           DSM 16646]
 gi|302200113|gb|ADL07683.1| protein of unknown function UPF0054 [Thermosediminibacter oceani
           DSM 16646]
          Length = 162

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 6/111 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAY 108
           VE+S+VF D+  I  LN  YRG D PT+VLSF     S+D           MLGDIV++ 
Sbjct: 40  VEVSVVFVDNDYIRELNRSYRGKDMPTDVLSFSMRETSADEAFDGNEEVERMLGDIVISL 99

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           E    +A+  G  FE  + +L++HG LHLLGYDH +++D  +M   E  +L
Sbjct: 100 EKAREQADAFGHSFEREVGYLVVHGVLHLLGYDHEEERDKKIMREKEEEVL 150


>gi|254435169|ref|ZP_05048676.1| conserved hypothetical protein TIGR00043 [Nitrosococcus oceani
           AFC27]
 gi|207088280|gb|EDZ65552.1| conserved hypothetical protein TIGR00043 [Nitrosococcus oceani
           AFC27]
          Length = 143

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 64/114 (56%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++          LN+ YR  +  TN+LSFP    S       +LGD+V+   ++  EA
Sbjct: 28  EITIRVASESEAAQLNWRYRHKEGATNILSFPFEVPSCVSLDVPLLGDLVICAPVVAREA 87

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               K+ + H  HL++HG LHLLG+DH  + +A  ME LE +ILE LG  DPYE
Sbjct: 88  LEQTKKEQAHWAHLVVHGVLHLLGFDHQQEVEAQQMESLEVTILESLGYPDPYE 141


>gi|77163774|ref|YP_342299.1| hypothetical protein Noc_0239 [Nitrosococcus oceani ATCC 19707]
 gi|123595149|sp|Q3JEH7|RRMF_NITOC RecName: Full=Probable rRNA maturation factor
 gi|76882088|gb|ABA56769.1| Protein of unknown function UPF0054 [Nitrosococcus oceani ATCC
           19707]
          Length = 153

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 64/114 (56%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++          LN+ YR  +  TN+LSFP    S       +LGD+V+   ++  EA
Sbjct: 38  EITIRVASESEAAQLNWRYRHKEGATNILSFPFEVPSCVSLDVPLLGDLVICAPVVAREA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               K+ + H  HL++HG LHLLG+DH  + +A  ME LE +ILE LG  DPYE
Sbjct: 98  LEQTKKEQAHWAHLVVHGVLHLLGFDHQQEVEAQQMESLEVTILESLGYPDPYE 151


>gi|114331764|ref|YP_747986.1| hypothetical protein Neut_1787 [Nitrosomonas eutropha C91]
 gi|122313486|sp|Q0AF61|RRMF_NITEC RecName: Full=Probable rRNA maturation factor
 gi|114308778|gb|ABI60021.1| protein of unknown function UPF0054 [Nitrosomonas eutropha C91]
          Length = 141

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 71/141 (50%), Gaps = 12/141 (8%)

Query: 34  VVFAKAVSNLISKGYFVK------ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           V FA   +N+  +  F K          E+ +        E LN ++RG D  TNVL+F 
Sbjct: 3   VQFAADKTNIPGRQLFRKWVGAALNKPAEIVIRIVGMQEGEVLNRKFRGKDSATNVLTF- 61

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                SD     +LGDIVL   +I  EA    K+   H  HLI+HG LHL GYDH+ D+D
Sbjct: 62  ---VYSDDVP--LLGDIVLCAPVISREAEQQNKDLVAHYAHLIVHGVLHLQGYDHISDED 116

Query: 148 ACVMEGLERSILEDLGINDPY 168
           A VME LE  I+  L   DPY
Sbjct: 117 AVVMESLETKIITRLNYPDPY 137


>gi|262277763|ref|ZP_06055556.1| conserved hypothetical protein [alpha proteobacterium HIMB114]
 gi|262224866|gb|EEY75325.1| conserved hypothetical protein [alpha proteobacterium HIMB114]
          Length = 150

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 93/153 (60%), Gaps = 13/153 (8%)

Query: 13  LQIAVENALW-GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           + I+ ++ +W  D  ++    + +  K++   +S+  F+ +NI E+S++ T++ ++ +LN
Sbjct: 4   IHISCDSKIWLKDSTNVEKKIKNILKKSI---MSEKKFLSKNI-EISVLLTNTKKMTSLN 59

Query: 72  FEYRGIDKPTNVLSFPTA----FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           ++YR   K T++LSFP+     F       ++ LGD+ L++  I+ +    G EFE +L 
Sbjct: 60  YKYRNKKKDTDILSFPSEKPNFFKKKLKQKNIYLGDLALSFNYIKKQ----GIEFEEYLK 115

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            +++HGFLHL+GYDH ++K+   ME ++  IL+
Sbjct: 116 KMLVHGFLHLIGYDHDNEKNFLKMEKIQNKILK 148


>gi|134296888|ref|YP_001120623.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           vietnamiensis G4]
 gi|134140045|gb|ABO55788.1| protein of unknown function UPF0054 [Burkholderia vietnamiensis G4]
          Length = 258

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 78/160 (48%), Gaps = 11/160 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L+ +++V+   +GDEI       +   K ++  I    F      +L++ F       TL
Sbjct: 109 LEFELSVQ---YGDEITAELRKTLPKRKLIAEWIEPALFAS---AQLTVRFVGEEEGRTL 162

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D PTNVL+F    A        ++GD+VL   ++E EA    K    H  HL+
Sbjct: 163 NAGYRHKDYPTNVLTF----AYDPAPDGTVIGDLVLCCPVVEKEAREQNKPLAAHYAHLL 218

Query: 131 IHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LH  GYDH   D DA  ME LE  IL  LG  +PY+
Sbjct: 219 VHGALHAQGYDHETSDADAAEMEALEIDILAKLGFPNPYQ 258


>gi|209694557|ref|YP_002262485.1| putative metalloprotease [Aliivibrio salmonicida LFI1238]
 gi|226703999|sp|B6EIN6|RRMF_ALISL RecName: Full=Probable rRNA maturation factor
 gi|208008508|emb|CAQ78679.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 153

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 13/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA EN     E  L +  E  F   ++ ++ +     +   EL++   D      
Sbjct: 4   ELDLQIACEN-----EKDLPS--EKDFMSWLNAVLPQF----QPQAELTIRIVDEKESHE 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG+DKPTNVLSFP  F +       +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHQYRGMDKPTNVLSFP--FEAPPEVEIDLLGDLIICRQVVEKEAVEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D++A  ME LE  +++++G  DPY
Sbjct: 111 VVHGSLHLLGYDHIEDEEAEEMESLETELMQEMGFEDPY 149


>gi|153873752|ref|ZP_02002229.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152069781|gb|EDN67770.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 181

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VEL++   D    + LN ++R    PTN+LSFP  F S       +LGD+V+   ++  E
Sbjct: 64  VELTIRIVDDEEAKQLNEKWRQRPNPTNILSFP--FESPLDLEIPLLGDLVICASVVARE 121

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           A    K  + H  HL+IHG LHLLGYDH++      ME  E  IL DLG ++PY++
Sbjct: 122 ATEQYKSLDAHWAHLVIHGTLHLLGYDHIEIAQEQFMESTEICILYDLGYSNPYQL 177


>gi|307293144|ref|ZP_07572990.1| protein of unknown function UPF0054 [Sphingobium chlorophenolicum
           L-1]
 gi|306881210|gb|EFN12426.1| protein of unknown function UPF0054 [Sphingobium chlorophenolicum
           L-1]
          Length = 166

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 78/145 (53%), Gaps = 8/145 (5%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-- 88
           L +     A+ +     +   E + E+++  T    +  LN  YR  DKPTNVLSFP   
Sbjct: 20  LAQRAVVAAIMHSPYAAFAADEALYEVAVKLTSDEEVHQLNRAYRDKDKPTNVLSFPMVQ 79

Query: 89  -----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                A A++D    ++LGDIVLA  +   EA   G    +H  HLI+HG  HLLGYDH+
Sbjct: 80  ADLLEATANTDD-GEVILGDIVLAEGVCAAEAAEKGISVADHATHLIVHGTFHLLGYDHM 138

Query: 144 DDKDACVMEGLERSILEDLGINDPY 168
           +D +A  ME LE   L  LGI+DPY
Sbjct: 139 EDAEAEAMEALETQSLVSLGISDPY 163


>gi|170741365|ref|YP_001770020.1| hypothetical protein M446_3180 [Methylobacterium sp. 4-46]
 gi|168195639|gb|ACA17586.1| protein of unknown function UPF0054 [Methylobacterium sp. 4-46]
          Length = 159

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 72/115 (62%), Gaps = 3/115 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S++ TD   ++ LN  +RG DKPTNVLSFP   A   G +   LGD+VLAY+ +  E
Sbjct: 42  VEVSVLLTDDEAVQELNRTWRGKDKPTNVLSFPAGHAH--GGAPRPLGDVVLAYDTMLRE 99

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           +    K   +HL HL++HG LHLLG DH   + +A  ME LE + L  LG+ DPY
Sbjct: 100 SGEQSKPLGHHLAHLLVHGTLHLLGQDHETGEAEAEAMEALEAAALARLGVPDPY 154


>gi|225848714|ref|YP_002728877.1| hypothetical protein SULAZ_0899 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644244|gb|ACN99294.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 150

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 6/141 (4%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
           L   E++ + + +    KAV  ++       ENI E+S+  TD+  I+++N E+R  DKP
Sbjct: 6   LINKEVYDKEITKEFVKKAVEQILKNLQL--ENI-EISITLTDNDTIKSINKEWRNKDKP 62

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T+VLSFP  F  + G    +LGD++++    + +A  +G  ++  +V L+ HG LHLLGY
Sbjct: 63  TDVLSFP--FGDTIGYKYRVLGDVIISLPYAKKQAQEIGFSYKQEIVRLLTHGILHLLGY 120

Query: 141 DH-VDDKDACVMEGLERSILE 160
           DH  +++DA VM  L+  I E
Sbjct: 121 DHETNEEDAKVMFNLQDKIFE 141


>gi|134300321|ref|YP_001113817.1| putative metalloprotease [Desulfotomaculum reducens MI-1]
 gi|189039698|sp|A4J7D9|RRMF_DESRM RecName: Full=Probable rRNA maturation factor
 gi|134053021|gb|ABO50992.1| protein of unknown function UPF0054 [Desulfotomaculum reducens
           MI-1]
          Length = 153

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 42  NLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-- 99
           +L S+GY       E+ L+F D + I +LN EYRGIDK T+VLSF               
Sbjct: 29  SLESEGYSPD---AEVGLIFVDDNYIRSLNAEYRGIDKATDVLSFALNEGEEMPEEEEAE 85

Query: 100 -MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
            +LGDIV++    + +A   G  F   + +L  HG LHLLGYDH+ ++D  VM   E  I
Sbjct: 86  DLLGDIVISLPTAQRQAAEYGHSFNREVAYLTAHGSLHLLGYDHMTEEDRQVMRQKEEGI 145

Query: 159 LEDLGIN 165
           LE LGIN
Sbjct: 146 LERLGIN 152


>gi|53804491|ref|YP_113914.1| hypothetical protein MCA1457 [Methylococcus capsulatus str. Bath]
 gi|59799087|sp|Q608N3|RRMF_METCA RecName: Full=Probable rRNA maturation factor
 gi|53758252|gb|AAU92543.1| conserved hypothetical protein TIGR00043 [Methylococcus capsulatus
           str. Bath]
          Length = 150

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 2/114 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+ +   D      LN  YRG   PTNVLSFP  F   +G  + +LGD+V+   ++E E
Sbjct: 33  AEVVIRIVDREESAALNSTYRGKTGPTNVLSFP--FVVPEGVPNDLLGDLVICAPVVERE 90

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK  E H  H+++HG LHL GYDH+++ +A +ME  E +IL  LG+ +PY
Sbjct: 91  AAEQGKPVEAHWAHMVVHGMLHLQGYDHIEEAEAEIMENREIAILRGLGMENPY 144


>gi|269139974|ref|YP_003296675.1| hypothetical protein ETAE_2629 [Edwardsiella tarda EIB202]
 gi|267985635|gb|ACY85464.1| hypothetical protein ETAE_2629 [Edwardsiella tarda EIB202]
 gi|304559807|gb|ADM42471.1| heat shock protein [Edwardsiella tarda FL6-60]
          Length = 157

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 70/117 (59%), Gaps = 2/117 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG D+PTNVLSFP  F +  G    +LGD+V+  +++E E
Sbjct: 39  AEVTIRLVDEAESHELNLTYRGKDRPTNVLSFP--FEAPPGIELPLLGDMVICRQVVERE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           A        +H  H+++HG LHLLGYDH+ D++A  ME LE  I++ LG  DPY  +
Sbjct: 97  AQEQNIAPLSHWAHMVVHGSLHLLGYDHISDEEAEEMESLEADIMQALGYPDPYAAE 153


>gi|289209297|ref|YP_003461363.1| hypothetical protein TK90_2137 [Thioalkalivibrio sp. K90mix]
 gi|288944928|gb|ADC72627.1| protein of unknown function UPF0054 [Thioalkalivibrio sp. K90mix]
          Length = 171

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 1/127 (0%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCSSLMLGD 103
           ++  +      +++L   D+     LN  +RG D  TNVLSFP              LGD
Sbjct: 27  ARAAWRGTGRADVALRVVDADEGLELNRGFRGRDYATNVLSFPAPDLPPMAAGEPRYLGD 86

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           IVL   ++  EA   GK    H  H+++HG LHL G DH +  +A  ME +ERSIL  LG
Sbjct: 87  IVLCAPVLAREAAEQGKSLRAHYSHMVVHGLLHLQGMDHQESGEAEAMEAVERSILAGLG 146

Query: 164 INDPYEV 170
             DPY+ 
Sbjct: 147 YPDPYQT 153


>gi|6523485|emb|CAB62265.1| YbeY protein [Salmonella typhimurium]
          Length = 123

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 13/131 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A EN       H     E  F + +  +I +  F +E  V + LV  D      L
Sbjct: 6   LDLQLACEN-------HAGLPDEAQFQRWLDGVIPQ--FQEEAEVTIRLV--DEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPAGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMV 112

Query: 131 IHGFLHLLGYD 141
           +HG LHLLGYD
Sbjct: 113 VHGSLHLLGYD 123


>gi|298369902|ref|ZP_06981218.1| metalloprotease [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281362|gb|EFI22851.1| metalloprotease [Neisseria sp. oral taxon 014 str. F0314]
          Length = 171

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 14/125 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------PTAFASSDGCSSLMLGDIVL 106
            ++SL+  D       N +YRG D  TNVLSF        P  F  SDG    + GD+++
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQF--SDG----LCGDLII 104

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
             +++  EA   GK  E H  HL +HG LHL+GYDH++D DA  ME LE  +++ L   +
Sbjct: 105 CPQVVFKEAAEQGKTAEQHFAHLTLHGTLHLMGYDHIEDHDAEEMEALEIRLMQALNYPN 164

Query: 167 PYEVD 171
           PY  D
Sbjct: 165 PYRED 169


>gi|329911493|ref|ZP_08275544.1| A heat shock protein involved in translation, putative protease
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545865|gb|EGF30976.1| A heat shock protein involved in translation, putative protease
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 154

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L  +V    V   +    F      EL++ F DS    TLN +YR  D  TNVL+F    
Sbjct: 18  LATLVTRPLVRRWVQAALFAP---AELTVRFVDSDEGRTLNRDYRSKDYATNVLTFAYND 74

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
              D    +   D++L  ++++ EA   GK    H  HL++HG +H  GYDH D+ +A  
Sbjct: 75  GEEDPNDDITRADLILCTDVLQAEALAQGKPLLAHAAHLVVHGVMHAQGYDHEDEVEADE 134

Query: 151 MEGLERSILEDLGINDPYE 169
           ME LE  +L  LG  +PY+
Sbjct: 135 MEALEIEVLAKLGFGNPYQ 153


>gi|224827049|ref|ZP_03700146.1| protein of unknown function UPF0054 [Lutiella nitroferrum 2002]
 gi|224600715|gb|EEG06901.1| protein of unknown function UPF0054 [Lutiella nitroferrum 2002]
          Length = 168

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 63/118 (53%), Gaps = 3/118 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEI 113
            ++SL+  +      LN +YRG D  TNVLSF  A    +    + L GD+VL   ++  
Sbjct: 51  AQISLLLVEGEEGRALNRDYRGKDYATNVLSF--ALNEGETLPGMPLFGDLVLCVPVVAR 108

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           EA         H  HL +HG LHL GYDH DD +A VME LE +IL  LG  DPY  +
Sbjct: 109 EAAEQDTPLAAHYAHLTVHGMLHLQGYDHEDDDEAEVMEALETAILAKLGYPDPYAAE 166


>gi|172061653|ref|YP_001809305.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           ambifaria MC40-6]
 gi|171994170|gb|ACB65089.1| protein of unknown function UPF0054 [Burkholderia ambifaria MC40-6]
          Length = 261

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 88/166 (53%), Gaps = 18/166 (10%)

Query: 9   PR-LDLQIAVENALWGDEI--HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           PR L+  ++V+   +GDEI   +R  C     K ++  I    F   +  +L++ F    
Sbjct: 109 PRELEFDLSVQ---YGDEITGDVRKACPK--RKLIAEWIEPALF---SSAQLTVRFVGEE 160

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFAS-SDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
              TLN  YR  D PTNVL+F  A+    DG    ++GD+VL   ++E EA   GK    
Sbjct: 161 EGRTLNDGYRHKDYPTNVLTF--AYDPLPDGT---VIGDLVLCCPVVEKEAQEQGKPLAA 215

Query: 125 HLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           H  HL++HG LH  GYDH   ++DA  ME LE +IL  LG  +PY+
Sbjct: 216 HYAHLLVHGALHAQGYDHETSEEDAAEMEALEVAILAKLGFPNPYQ 261


>gi|294637488|ref|ZP_06715774.1| putative metalloprotease [Edwardsiella tarda ATCC 23685]
 gi|291089320|gb|EFE21881.1| putative metalloprotease [Edwardsiella tarda ATCC 23685]
          Length = 157

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 88/160 (55%), Gaps = 17/160 (10%)

Query: 11  LDLQIAVENA--LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           LDLQIA ++A  L  +   LR L E V  +          F  E  V + LV  D     
Sbjct: 6   LDLQIACDDAPGLPAEGDFLRWL-EAVLPR----------FRDEAEVTIRLV--DEAESH 52

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YRG D+PTNVLSFP  F +       +LGD+V+  +++E+EA        +H  H
Sbjct: 53  ELNLTYRGKDRPTNVLSFP--FEAPPEIELPLLGDMVICRQVVELEAQQQNITPLSHWAH 110

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHLLGYDH+ D++A  ME LE  I++ LG  DPY
Sbjct: 111 MVVHGALHLLGYDHISDEEAEEMESLEADIMQALGYPDPY 150


>gi|220920279|ref|YP_002495580.1| hypothetical protein Mnod_0233 [Methylobacterium nodulans ORS 2060]
 gi|219944885|gb|ACL55277.1| protein of unknown function UPF0054 [Methylobacterium nodulans ORS
           2060]
          Length = 159

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S+V TD   ++ LN  +RG DKPTNVLSFP       G     LGD+VLAY+ +  E
Sbjct: 42  VEVSVVLTDDAAVQELNRTWRGKDKPTNVLSFPAGHPH--GGDLRPLGDVVLAYDTMLRE 99

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI-LEDLGINDPY 168
           +    K   +HL HL++HG LHLLG DH   +           + L  LG+ DPY
Sbjct: 100 SGEQSKPLGHHLAHLLVHGTLHLLGQDHETGEAEAEAMEALEVVALRRLGVPDPY 154


>gi|289806764|ref|ZP_06537393.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 98

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%)

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           TNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H+++HG LHLLGY
Sbjct: 6   TNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGY 63

Query: 141 DHVDDKDACVMEGLERSILEDLGINDPY 168
           DH+DD +A  ME LE  I+  +G  DPY
Sbjct: 64  DHIDDDEAEEMESLETEIMLAMGYEDPY 91


>gi|284009229|emb|CBA76319.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 164

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D    + LN  YRG D PTNVLSFP  F + D     +LGD+V+  +++E EA
Sbjct: 49  EITIRIVDIAESQYLNLTYRGKDNPTNVLSFP--FEALDNIPLPLLGDLVICRQVVEKEA 106

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               K  + H  H++IHG LHLLGYDH +D +A  ME +E  I++ LG  DPY+
Sbjct: 107 IEQHKTLDAHWAHMVIHGCLHLLGYDHQNDFEAEEMETIETEIMQKLGYPDPYQ 160


>gi|238920800|ref|YP_002934315.1| hypothetical protein NT01EI_2926 [Edwardsiella ictaluri 93-146]
 gi|259646922|sp|C5BGB7|RRMF_EDWI9 RecName: Full=Probable rRNA maturation factor
 gi|238870369|gb|ACR70080.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 157

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 70/117 (59%), Gaps = 2/117 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG D+PTNVLSFP  F +  G    +LGD+V+  +++E E
Sbjct: 39  AEVTIRLVDEAESHELNLTYRGKDRPTNVLSFP--FEAPPGIELPLLGDMVICRQVVERE 96

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           A        +H  H+++HG LHLLGYDH+ D++A  ME LE  I++ LG  DPY  +
Sbjct: 97  AQEQNISQLSHWAHMVVHGSLHLLGYDHISDEEAEEMESLEAEIMQVLGYPDPYAAE 153


>gi|90416862|ref|ZP_01224791.1| hypothetical protein GB2207_06363 [marine gamma proteobacterium
           HTCC2207]
 gi|90331209|gb|EAS46453.1| hypothetical protein GB2207_06363 [marine gamma proteobacterium
           HTCC2207]
          Length = 164

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+   D       N  YRG    TNVLSFP    + +     +LGD+V+   ++  EA
Sbjct: 38  ELSIRIVDEQESADFNQRYRGKSGATNVLSFPFDAVTPEPLP--ILGDLVICAPVVIREA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +   K  + H  H++IHG LHLLGYDH++D+DA  MEGLE  I+  L    PY +
Sbjct: 96  SDQQKTVDAHWAHIVIHGVLHLLGYDHIEDQDAEQMEGLETEIMLKLDFPAPYRI 150


>gi|212696004|ref|ZP_03304132.1| hypothetical protein ANHYDRO_00540 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676991|gb|EEB36598.1| hypothetical protein ANHYDRO_00540 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 154

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 6/121 (4%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCS-----SLMLGD 103
           V E   E+SL F D  +I  LN ++R  D+ T+VLSFP   F + D  +      LMLGD
Sbjct: 32  VDEKKCEISLSFVDEIKIRDLNKDFRQTDRVTDVLSFPIEDFFNEDRKTLLEKPYLMLGD 91

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +V+  ++   +A  LG  FE  +++L  H  LHLLGYDH+++ D  +M   E+ ++++LG
Sbjct: 92  VVICTDVARKQAKELGHSFEREIIYLTCHSILHLLGYDHMEEDDKKIMRLKEKQVMKNLG 151

Query: 164 I 164
           +
Sbjct: 152 V 152


>gi|104783749|ref|YP_610247.1| putative metalloprotease [Pseudomonas entomophila L48]
 gi|122401726|sp|Q1I4H2|RRMF_PSEE4 RecName: Full=Probable rRNA maturation factor
 gi|95112736|emb|CAK17464.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 157

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 75/143 (52%), Gaps = 13/143 (9%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R  CE+   +  ++             E+++   D      LN  YR  D  TNVLSFP 
Sbjct: 21  RRWCELALRQRTAD------------SEMTIRLVDEAEGRELNHTYRHKDYATNVLSFP- 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           A    D     +LGD+V+   ++E EA   GK  E H  HL+IHG LHLLGYDH++D +A
Sbjct: 68  ADVPDDLLDIPLLGDLVICVPVVEREAREQGKALEAHWAHLVIHGCLHLLGYDHIEDDEA 127

Query: 149 CVMEGLERSILEDLGINDPYEVD 171
             ME LER +L +LG  DPY  D
Sbjct: 128 EEMEALERELLAELGHPDPYADD 150


>gi|115352799|ref|YP_774638.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           ambifaria AMMD]
 gi|115282787|gb|ABI88304.1| protein of unknown function UPF0054 [Burkholderia ambifaria AMMD]
          Length = 261

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 18/166 (10%)

Query: 9   PR-LDLQIAVENALWGDEI--HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           PR L+  ++V+   +GDE+   +R  C     K ++  I    F   +  +L++ F    
Sbjct: 109 PRELEFDLSVQ---YGDEVTGDVRKACPK--RKLIAEWIEPALF---SSAQLTVRFVGEE 160

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFAS-SDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
              TLN  YR  D PTNVL+F  A+    DG    ++GD+VL   ++E EA   GK    
Sbjct: 161 EGRTLNDGYRHKDYPTNVLTF--AYDPLPDGT---VIGDLVLCCPVVEKEAQEQGKPLAA 215

Query: 125 HLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           H  HL++HG LH  GYDH   ++DA  ME LE +IL  LG  +PY+
Sbjct: 216 HYAHLLVHGALHAQGYDHETSEEDAAEMEALEVAILAKLGFPNPYQ 261


>gi|50086161|ref|YP_047671.1| hypothetical protein ACIAD3160 [Acinetobacter sp. ADP1]
 gi|59799110|sp|Q6F7W6|RRMF_ACIAD RecName: Full=Probable rRNA maturation factor
 gi|49532137|emb|CAG69849.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
          Length = 159

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D  +   LN EYRG DK TNVLSFP+           +  LGD+V+   ++  
Sbjct: 41  EIGIACVDHEQSHRLNLEYRGKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLD 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  + H +H+++HG LHLLGYDH   D+DA  ME LE  IL  LG+ +PY+
Sbjct: 101 EAIEQHKTAQAHFMHMLVHGTLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQ 157


>gi|26991468|ref|NP_746893.1| putative metalloprotease [Pseudomonas putida KT2440]
 gi|37999614|sp|Q88DN6|RRMF_PSEPK RecName: Full=Probable rRNA maturation factor
 gi|24986545|gb|AAN70357.1|AE016677_8 conserved hypothetical protein TIGR00043 [Pseudomonas putida
           KT2440]
          Length = 157

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+Q A + A   D   LR  CE+   +  ++             E+++   D      L
Sbjct: 4   LDIQRATDAATPEDAA-LRRWCELALRQRSAD------------SEMTIRLVDEAEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D  TNVLSFP A    D     +LGD+V+   ++E EA   GK  E H  HL+
Sbjct: 51  NHTYRHKDYATNVLSFP-ADVPDDLLDIPLLGDLVICVAVVEREAAEQGKSLEAHWAHLV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH++D++A  ME LER +L +LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIEDEEAEEMESLERELLAELGHPDPYADD 150


>gi|226951970|ref|ZP_03822434.1| metalloprotease [Acinetobacter sp. ATCC 27244]
 gi|226837308|gb|EEH69691.1| metalloprotease [Acinetobacter sp. ATCC 27244]
          Length = 161

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 7/121 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM----LGDIVLAYEII 111
           E+ +   D      LN +YR  DKPTNVLSFP+     +   SL+    LGD+V+   ++
Sbjct: 41  EIGIACVDLAESHELNLQYREKDKPTNVLSFPSDI--PEKMLSLLDAEPLGDLVICMPVV 98

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYEV 170
             EA    K   +H  HL++HG LHLLGYDH   + DA  ME LE +IL+ L I +PY+ 
Sbjct: 99  LQEAKEQQKTPMDHFTHLLVHGILHLLGYDHETSESDAEEMEALEIAILKKLNIANPYQA 158

Query: 171 D 171
           D
Sbjct: 159 D 159


>gi|288555741|ref|YP_003427676.1| putative metalloprotease [Bacillus pseudofirmus OF4]
 gi|288546901|gb|ADC50784.1| putative metalloprotease [Bacillus pseudofirmus OF4]
          Length = 156

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------LGDIVLAY 108
           VELS+ F D  RI+ +N EYRG D PT+V+SF       D    +M      LGDI+++ 
Sbjct: 39  VELSITFVDEKRIQEINAEYRGKDIPTDVISFALNDEVEDEADMIMAGMPNALGDIIISV 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             I  +A   G  FE  L  L++HGFLHLLGYDH+ ++D   M   +  IL   G+ 
Sbjct: 99  AHISRQAEEYGHSFERELGFLVVHGFLHLLGYDHMTEQDEKAMFSRQEEILSAYGLT 155


>gi|255659361|ref|ZP_05404770.1| putative metalloprotease [Mitsuokella multacida DSM 20544]
 gi|260848445|gb|EEX68452.1| putative metalloprotease [Mitsuokella multacida DSM 20544]
          Length = 154

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS----SDGCSSLMLGDIVLAYEII 111
           E+S+  T++  I  LN +YRGID+PT+VLSF    +     + G    +LGD+V++ E  
Sbjct: 39  EVSITLTNNAYIHELNRQYRGIDRPTDVLSFALNESEEPEVTGGADINVLGDLVISVERA 98

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E +A   G   +  +  L +HG LHLLGYDH+++K+   ME  +R ++E LGI
Sbjct: 99  EEQAKDFGHSVKREMAFLTVHGMLHLLGYDHMEEKERLEMEQEQRFVMEKLGI 151


>gi|237798428|ref|ZP_04586889.1| metal-binding heat shock protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021280|gb|EGI01337.1| metal-binding heat shock protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 166

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E +    E   R  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQVASETSA-PSEAQFRLWCEM------------GLRQRSADSELTVRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  D  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKDYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHLDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|332969607|gb|EGK08625.1| metal-dependent hydrolase [Kingella kingae ATCC 23330]
          Length = 170

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----AFASSDGCSSLMLGDIVLAYE 109
            ELSLV  D       N +YR  D  TNVLSF       +F   D   +++ GD+++  +
Sbjct: 52  AELSLVLLDEEAARQYNRDYRQKDYATNVLSFAHNEGEFSFVEQD---NILRGDLIICPQ 108

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++  EA   GK   +H  HL+IHG LHL+G+DH+ D +A  ME LE  +L  L I +PY
Sbjct: 109 VVAKEAAEQGKSLHDHFAHLVIHGTLHLIGFDHIQDDEAEQMEQLETELLAQLRIANPY 167


>gi|226325256|ref|ZP_03800774.1| hypothetical protein COPCOM_03048 [Coprococcus comes ATCC 27758]
 gi|225206604|gb|EEG88958.1| hypothetical protein COPCOM_03048 [Coprococcus comes ATCC 27758]
          Length = 164

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---------AFASSDGCS------SL 99
            ++ L+ T +  I  +N E+RGID+ T+VLSFP          A+  +D  S       L
Sbjct: 38  AQVELLLTMNEEIRQMNLEFRGIDRATDVLSFPMTEFPSPADYAYLDTDDSSFDPETGEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           MLG+IV++ E  + +A   G   E     LI H  LHLLGYDH++D++  VME  +R +L
Sbjct: 98  MLGNIVISKERAKEQAEEYGHSVEREFAFLIAHSMLHLLGYDHMEDEERLVMEKKQREVL 157

Query: 160 EDLGIN 165
           E LGI 
Sbjct: 158 EMLGIT 163


>gi|262374160|ref|ZP_06067437.1| metal-dependent hydrolase [Acinetobacter junii SH205]
 gi|262311171|gb|EEY92258.1| metal-dependent hydrolase [Acinetobacter junii SH205]
          Length = 161

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 3/119 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D      LN +YR  DKPTNVLSFP+           +  LGD+V+   ++  
Sbjct: 41  EIGIACVDLAESHELNLQYREKDKPTNVLSFPSDIPEEMLSLLEAEPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYEVD 171
           EA    K   +H  HL++HG LHLLGYDH   + +A  ME LE  IL+ LGI++PY+ D
Sbjct: 101 EAAEQQKTPSDHFTHLLVHGILHLLGYDHETSEVEAEEMEALEIEILKKLGISNPYQAD 159


>gi|160872543|ref|ZP_02062675.1| conserved hypothetical protein [Rickettsiella grylli]
 gi|159121342|gb|EDP46680.1| conserved hypothetical protein [Rickettsiella grylli]
          Length = 157

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 80/171 (46%), Gaps = 18/171 (10%)

Query: 1   MSVKKVNLPRLD--LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           M   K+N  R+   LQI V N+       L+       +    N          NIV + 
Sbjct: 1   MHKTKINEKRIKITLQIRVRNSFIPSRYFLKRWVHTALSGQTEN----------NIVNIR 50

Query: 59  LVFT-DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
           LV   +S ++ TL   YR     TN+LSFP  F      +S  LGD+VL    I  EA  
Sbjct: 51  LVTQKESAKLNTL---YRHKKGATNILSFP--FEPPPQVTSPFLGDLVLCATHINQEAKQ 105

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             K    H  HLIIHG LHL+GYDH    +A  ME LE  +L++LG  +PY
Sbjct: 106 QQKTRLAHWAHLIIHGCLHLIGYDHAHRHEAVKMETLEIQLLKELGYENPY 156


>gi|145572775|sp|Q0BC19|RRMF_BURCM RecName: Full=Probable rRNA maturation factor
          Length = 175

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 16/165 (9%)

Query: 9   PR-LDLQIAVENALWGDEI--HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           PR L+  ++V+   +GDE+   +R  C     K ++  I    F   +  +L++ F    
Sbjct: 23  PRELEFDLSVQ---YGDEVTGDVRKACPK--RKLIAEWIEPALF---SSAQLTVRFVGEE 74

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA   GK    H
Sbjct: 75  EGRTLNDGYRHKDYPTNVLTF----AYDPLPDGTVIGDLVLCCPVVEKEAQEQGKPLAAH 130

Query: 126 LVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
             HL++HG LH  GYDH   ++DA  ME LE +IL  LG  +PY+
Sbjct: 131 YAHLLVHGALHAQGYDHETSEEDAAEMEALEVAILAKLGFPNPYQ 175


>gi|315925212|ref|ZP_07921426.1| metal dependent hydrolase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621446|gb|EFV01413.1| metal dependent hydrolase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 156

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 80/160 (50%), Gaps = 17/160 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVS----NLISKGYFVKENIVELSLVFTDSHRIE 68
           L I  EN    DE+    L E ++AK  +     L S+   V + I+E+SL       I 
Sbjct: 2   LTIQFENQ--TDEV----LSEALWAKMQTCIRKTLASENVLVDKLILEVSLTLVSPETIR 55

Query: 69  TLNFEYRGIDKPTNVLSFPT-----AFASSDGCSSL--MLGDIVLAYEIIEIEANVLGKE 121
            LN  YRGID+ T+VLSFP        A+    S L  +LGDIVL       +    G  
Sbjct: 56  MLNANYRGIDRVTDVLSFPMLVFPEGMAALTAPSDLPILLGDIVLNPRRAAEQGETYGTG 115

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           FE  + +L +H  LHLLGYDH+D  D   M   E++I++D
Sbjct: 116 FEREMCYLTVHSVLHLLGYDHMDPDDKQAMRAREKAIMDD 155


>gi|171464143|ref|YP_001798256.1| protein of unknown function UPF0054 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193681|gb|ACB44642.1| protein of unknown function UPF0054 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 157

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 5/112 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++L F ++   + LN  +R  D  TNVL+FP A + +D     +  DI+    +++ EA 
Sbjct: 50  ITLRFVNTTEGKKLNLAFRQKDYATNVLTFPYALSKND-----LAADIIFCLPVLQKEAK 104

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
              K  + HL HLI+HG LH  GYDH   KDA  ME LE  ILE LG  +PY
Sbjct: 105 EQDKLLKAHLAHLIVHGCLHAQGYDHELTKDAKKMEALEIHILEKLGFANPY 156


>gi|73667540|ref|YP_303556.1| hypothetical protein Ecaj_0927 [Ehrlichia canis str. Jake]
 gi|123614591|sp|Q3YQP7|RRMF_EHRCJ RecName: Full=Probable rRNA maturation factor
 gi|72394681|gb|AAZ68958.1| protein of unknown function UPF0054 [Ehrlichia canis str. Jake]
          Length = 154

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 18/148 (12%)

Query: 35  VFAKAVSNLISKGY-FVKE---------NIVE----LSLVFTDSHRIETLNFEYRGIDKP 80
           V+ K   N+I K   FVK          NI E    +S+V  ++  ++ LN+EYR  +KP
Sbjct: 6   VYYKKWYNVIRKPKSFVKNIINTSLIDLNIYEYKPIISIVLANNKLLQQLNYEYRKKNKP 65

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           TNVLSFP        C    LG+I ++ +++  E+  L    E+H  H++IHG LH+L Y
Sbjct: 66  TNVLSFPYN-KLDKNC---YLGEIFISLDVLMNESVDLNIPIEHHTSHMLIHGLLHILDY 121

Query: 141 DHVDDKDACVMEGLERSILEDLGINDPY 168
           DH +  D  +ME +E  +L+ LGI +PY
Sbjct: 122 DHEEPLDQYIMESIEIKLLDKLGIKNPY 149


>gi|238022353|ref|ZP_04602779.1| hypothetical protein GCWU000324_02260 [Kingella oralis ATCC 51147]
 gi|237866967|gb|EEP68009.1| hypothetical protein GCWU000324_02260 [Kingella oralis ATCC 51147]
          Length = 167

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAY 108
            E+SL+  D       N +YR  D  TNVLSF    A ++G   L      + GD+++  
Sbjct: 51  AEISLLLLDEADARAYNRDYRQKDYATNVLSF----ALNEGEMMLPAQDDTLRGDLIICP 106

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++  EA   GK   +H  HL++HG LHL+GYDH++D +A  ME LE  +L  LGI +PY
Sbjct: 107 QVVRREATEQGKLLAHHYAHLVLHGTLHLMGYDHINDDEAEEMEALETRLLAQLGIANPY 166

Query: 169 E 169
           E
Sbjct: 167 E 167


>gi|294649234|ref|ZP_06726672.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824901|gb|EFF83666.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 161

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 7/121 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM----LGDIVLAYEII 111
           E+ +   D      LN +YR  DKPTNVLSFP+     +   SL+    LGD+V+   ++
Sbjct: 41  EIGIACVDLAESHELNLQYREKDKPTNVLSFPSDIP--EEMLSLLDAEPLGDLVICMPVV 98

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYEV 170
             EA    K   +H  HL++HG LHLLGYDH   + DA  ME LE +IL+ L I +PY+ 
Sbjct: 99  LQEAEEQQKTPMDHFTHLLVHGILHLLGYDHETSESDAEEMEALEIAILKKLNIANPYQA 158

Query: 171 D 171
           D
Sbjct: 159 D 159


>gi|297617803|ref|YP_003702962.1| hypothetical protein Slip_1638 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145640|gb|ADI02397.1| protein of unknown function UPF0054 [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 158

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 7/118 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-------SLMLGDIVLA 107
            E+SLV  D   I + N EYRG+D+PT+VLSF     +SD            +LGDI+++
Sbjct: 39  TEVSLVLVDEEEIRSFNREYRGVDRPTDVLSFALNEGTSDEPGYEAPEEMEPVLGDIIIS 98

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            E  E +    G      + +L +HG LHLLGYDH D++    M  +E  +L+D+G++
Sbjct: 99  LETAEDQGRDYGHGLAREVAYLAVHGMLHLLGYDHQDEEARTEMRLMEERVLKDVGLD 156


>gi|251796244|ref|YP_003010975.1| hypothetical protein Pjdr2_2233 [Paenibacillus sp. JDR-2]
 gi|247543870|gb|ACT00889.1| protein of unknown function UPF0054 [Paenibacillus sp. JDR-2]
          Length = 165

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 14/124 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLML 101
           E++L FTD+ +I  LN EYR ID+PT+VLSF      ++                 S ML
Sbjct: 41  EVTLTFTDNEQIHQLNREYRNIDRPTDVLSFAMQDEGTEELDIIFEVESEDEIDPISGML 100

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDIV++ E  + ++   G   E  +  L +HGFLHLLGYDH+DD     M   + ++L+ 
Sbjct: 101 GDIVISVEKAQEQSEDYGHSLEREIGFLFVHGFLHLLGYDHMDDAGEAEMTAKQEAVLQK 160

Query: 162 LGIN 165
            G++
Sbjct: 161 AGLS 164


>gi|237809458|ref|YP_002893898.1| hypothetical protein Tola_2719 [Tolumonas auensis DSM 9187]
 gi|259646893|sp|C4LBN8|RRMF_TOLAT RecName: Full=Probable rRNA maturation factor
 gi|237501719|gb|ACQ94312.1| protein of unknown function UPF0054 [Tolumonas auensis DSM 9187]
          Length = 155

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 14/162 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA       D   L +  E  F + +   +    F +E  V + LV  D      L
Sbjct: 5   LDLQIAC-----ADSTGLPS--ETQFQQWLDTAVLP--FQQEAEVTIRLV--DEAESNEL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           N  YRG DKPTNVLSFP  F          +LGD+++  +++E EA    K  E+H  H+
Sbjct: 54  NLTYRGKDKPTNVLSFP--FECPPEVEDFPLLGDLIICRQVVEKEALEQQKTLESHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D++A  ME LE+  ++ LG  DPY+ D
Sbjct: 112 VIHGSLHLLGYDHIEDEEAEEMEALEKEFMQTLGFPDPYKDD 153


>gi|226939223|ref|YP_002794294.1| metal-dependent hydrolase [Laribacter hongkongensis HLHK9]
 gi|254801582|sp|C1DAV4|RRMF_LARHH RecName: Full=Probable rRNA maturation factor
 gi|226714147|gb|ACO73285.1| Predicted metal-dependent hydrolase [Laribacter hongkongensis
           HLHK9]
          Length = 166

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 65/121 (53%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           +    ++ L   D+   + LN EYRG D  TNVLSF             ++GDIVLA E+
Sbjct: 45  RSRPAQIGLHVVDNAEGQRLNAEYRGKDSATNVLSFALNEGEEAVAGLPLMGDIVLAAEV 104

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +  EA   GK+   H  HL +HG LHL G+DH  D +A  ME LE  IL  LG  DPY V
Sbjct: 105 VAREAAEQGKDLHAHYAHLTVHGMLHLQGHDHETDTEAEAMEALETVILARLGYTDPYAV 164

Query: 171 D 171
           +
Sbjct: 165 E 165


>gi|332285329|ref|YP_004417240.1| hypothetical protein PT7_2076 [Pusillimonas sp. T7-7]
 gi|330429282|gb|AEC20616.1| hypothetical protein PT7_2076 [Pusillimonas sp. T7-7]
          Length = 164

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 82/168 (48%), Gaps = 19/168 (11%)

Query: 2   SVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVF 61
           ++    LPR  L+  V++AL G              KA +   + G F       L+L  
Sbjct: 12  AIPAAELPRWRLRRWVQHALSG------------VLKAEAEAGAPGRF---RAAALALRL 56

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
            D+     LN E+R  D  TNVL+F       +G +S   GDIVL   ++  EA    K 
Sbjct: 57  VDADEGRRLNREFRHKDYATNVLTFEYGI-DPEGVAS---GDIVLCLPVLYREAAEQKKS 112

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             +H  HL +HG LH LGYDH++ ++A  ME LE +IL  +G  DPY+
Sbjct: 113 ILDHAAHLTVHGVLHALGYDHIEPEEATDMEELETAILAKMGFADPYQ 160


>gi|114770162|ref|ZP_01447700.1| hypothetical protein OM2255_11015 [alpha proteobacterium HTCC2255]
 gi|114548999|gb|EAU51882.1| hypothetical protein OM2255_11015 [alpha proteobacterium HTCC2255]
          Length = 172

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 25/169 (14%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNL-ISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           I +E+  W D   ++ L +  F+     L +SK +       E+S++  +  +I  LN  
Sbjct: 14  IVIEDKRWSD-FGIQDLADRTFSIVFDVLNLSKKW-------EISILACNDAKIIELNST 65

Query: 74  YRGIDKP--TNVLSFPTAFASSDGCSSL------------MLGDIVLAYEIIEIEANVLG 119
           +R  DKP  TNVLS+P     SD                 +LGDI ++++  E EA    
Sbjct: 66  FR--DKPIATNVLSWPAHNLKSDFIGKTPNKPILSNIEENLLGDIAISFDTCEREAVESN 123

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             F++H  HL++HG LHLL YDH++D DA +ME LE  +L+ +GI DPY
Sbjct: 124 LHFKDHTTHLLVHGCLHLLNYDHINDLDALIMEKLETQLLKVMGIADPY 172


>gi|290968420|ref|ZP_06559959.1| metalloprotein, YbeY/ UPF0054 family [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781416|gb|EFD94005.1| metalloprotein, YbeY/ UPF0054 family [Megasphaera genomosp. type_1
           str. 28L]
          Length = 157

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 3/112 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEII 111
            E+S++   +  I  LN +YR ID+PT+VLSF       DG     + +LGDI+++ E +
Sbjct: 38  AEISILLCHNEYIHALNKQYRHIDRPTDVLSFALNEGEDDGYDGPDTALLGDIIISLEKV 97

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
             +A   G  FE  L +L IHG LH+LGYDH++ +D   M G E  IL  LG
Sbjct: 98  AEQAAEYGHSFERELAYLTIHGMLHILGYDHMEPEDKAEMRGEEEFILRRLG 149


>gi|188996202|ref|YP_001930453.1| protein of unknown function UPF0054 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|229557463|sp|B2V7H6|RRMF_SULSY RecName: Full=Probable rRNA maturation factor
 gi|188931269|gb|ACD65899.1| protein of unknown function UPF0054 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 152

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 3/111 (2%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           N VE+S+  TD+ RI  +N E+RG DKPT+VLSFP     + G    +LGD++++    +
Sbjct: 40  NNVEISITLTDNERIREINKEWRGKDKPTDVLSFPQ--DETIGYKYRLLGDVIISLPYAK 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
            +A  +G      ++ L++HG LHLLGYDH  +++DA +M  L+  I + L
Sbjct: 98  AQAEEIGLTLREEVLRLLVHGILHLLGYDHETNEEDAKIMFDLQDKIFDKL 148


>gi|330994668|ref|ZP_08318591.1| Putative metalloprotease [Gluconacetobacter sp. SXCC-1]
 gi|329758309|gb|EGG74830.1| Putative metalloprotease [Gluconacetobacter sp. SXCC-1]
          Length = 170

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
            +++V  D   +  +N+ +RG ++PTNVL+F   +A+      L  GDI++A+E +  EA
Sbjct: 47  PVTVVLADDRTVRHMNWRHRGRNRPTNVLTF--EYAAPHAPGGLWGGDIIIAFETLAREA 104

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
              G+    HL HL++HG LHL  YDH    +A  ME  E  IL  LG  +P++ 
Sbjct: 105 RAAGRSMAAHLAHLVVHGVLHLAQYDHHHPGEAREMEMEEARILSTLGFANPWKA 159


>gi|330960149|gb|EGH60409.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 166

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A E      E  LR  CE+            G   +    EL++   D      L
Sbjct: 4   LDLQVASETPA-PREDQLRLWCEM------------GLRQRSADSELTIRLVDETEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  D  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKDYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKLIDAHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHLDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|295698305|ref|YP_003602960.1| hypothetical protein RIEPE_0079 [Candidatus Riesia pediculicola
           USDA]
 gi|291157124|gb|ADD79569.1| conserved hypothetical protein [Candidatus Riesia pediculicola
           USDA]
          Length = 151

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 10/135 (7%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD- 94
           F K +  ++S  YF  E   E+S+       + TLN  YRG D PTNVLSF    +S+D 
Sbjct: 24  FIKWIDRVLS--YFSSEK--EISIYIASLEEMRTLNRLYRGRDYPTNVLSF----SSNDM 75

Query: 95  -GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
            G +   LGD+++ +EI++ EA    K  ++H  H+IIHG LHLLG  H ++ D   ME 
Sbjct: 76  RGFNFSFLGDLIICHEILKKEAKNQRKSIDSHWAHIIIHGCLHLLGIHHQNEIDLKKMES 135

Query: 154 LERSILEDLGINDPY 168
           +E  IL+ LG  +P+
Sbjct: 136 MEIKILKRLGYPNPF 150


>gi|148549866|ref|YP_001269968.1| putative metalloprotease [Pseudomonas putida F1]
 gi|167012965|sp|A5W9H4|RRMF_PSEP1 RecName: Full=Probable rRNA maturation factor
 gi|148513924|gb|ABQ80784.1| protein of unknown function UPF0054 [Pseudomonas putida F1]
 gi|313500768|gb|ADR62134.1| Putative metalloprotease [Pseudomonas putida BIRD-1]
          Length = 157

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+Q A + A   D   LR  CE+   +  ++             E+++   D      L
Sbjct: 4   LDIQRATDAATPEDAA-LRRWCELALRQRSAD------------SEMTIRLVDEAEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D  TNVLSFP A    +     +LGD+V+   ++E EA   GK  E H  HL+
Sbjct: 51  NHTYRHKDYATNVLSFP-ADVPDELLDIPLLGDLVICVAVVEREAAEQGKSLEAHWAHLV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH++D++A  ME LER +L +LG  DPY  D
Sbjct: 110 IHGCLHLLGYDHIEDEEAEEMESLERELLAELGHPDPYADD 150


>gi|326692991|ref|ZP_08229996.1| putative metalloprotease [Leuconostoc argentinum KCTC 3773]
          Length = 157

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 11/135 (8%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAF 90
           +V N   +   + +N  E+S+ F ++  I+  N EYRG+DKPT+V+SF           F
Sbjct: 23  SVINFAGQALALPDN-TEMSITFVNNDDIQRYNREYRGVDKPTDVISFAIEEGDDVFEQF 81

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDAC 149
           A  D  +   +GDI+++ ++I  +A  LG  +E  L  L++HGFLHL GYDH+  D +  
Sbjct: 82  AEIDEIAK-NIGDIIVSVDVIATQAEYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEK 140

Query: 150 VMEGLERSILEDLGI 164
            M  L+R IL+D G+
Sbjct: 141 EMFDLQRKILDDYGL 155


>gi|260438417|ref|ZP_05792233.1| putative metalloprotease [Butyrivibrio crossotus DSM 2876]
 gi|292809003|gb|EFF68208.1| putative metalloprotease [Butyrivibrio crossotus DSM 2876]
          Length = 166

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 66/125 (52%), Gaps = 15/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---------------CSSL 99
            E+SL  TD+  I  +N E+R ID+PT+VLSFP     + G                  L
Sbjct: 38  AEVSLTLTDNKGIHDINKEFRNIDRPTDVLSFPMVEYETPGEFDFLENEYDCFNPETGEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           MLGDIV++ + +E +A   G         LI H  LHL+GYDH+++ DA  ME  +  IL
Sbjct: 98  MLGDIVISLDKVEEQAANYGHSVTREYAFLIAHSMLHLMGYDHMEENDAKEMERRQAEIL 157

Query: 160 EDLGI 164
           E LGI
Sbjct: 158 ESLGI 162


>gi|258511950|ref|YP_003185384.1| hypothetical protein Aaci_1983 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478676|gb|ACV58995.1| protein of unknown function UPF0054 [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 157

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 5/113 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEII 111
           E+S++F D   I  LN  YR +D+PT+VLSFP     A A  D     MLGDIV++ +  
Sbjct: 43  EVSVLFVDDDAIHELNRTYRQVDRPTDVLSFPMNEGEALADPDDVEP-MLGDIVVSVDRA 101

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +A   G   E  +  L++HGFLHL GYDH D+     M GL+  IL+ +G+
Sbjct: 102 REQAEAYGHSLEREVAFLLVHGFLHLNGYDHEDEAGEREMFGLQEEILQGIGL 154


>gi|56963443|ref|YP_175174.1| metal-dependent hydrolase [Bacillus clausii KSM-K16]
 gi|59799080|sp|Q5WHE2|RRMF_BACSK RecName: Full=Probable rRNA maturation factor
 gi|56909686|dbj|BAD64213.1| metal-dependent hydrolase [Bacillus clausii KSM-K16]
          Length = 160

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 8/117 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--------MLGDIVLA 107
           E+S+ FT    I  LN E+RGID+PT+VLSF     +SD   +         +LGDIV++
Sbjct: 39  EVSVTFTTEEDIHELNREHRGIDRPTDVLSFALNDETSDFDPTFHEELGLPNLLGDIVIS 98

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              +E +A   G  FE  L  L++HGFLHLLGYDH+++++   M   +  IL+  G+
Sbjct: 99  VPHVERQAADYGHSFERELAFLVVHGFLHLLGYDHMNEEEEKQMFTKQEEILQSYGL 155


>gi|189351456|ref|YP_001947084.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           multivorans ATCC 17616]
 gi|189335478|dbj|BAG44548.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 258

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           +GDEI       +   K ++  +    F      ++++ F       TLN  YR  D PT
Sbjct: 117 YGDEITSEVRKTLPKRKLIAEWLEPALFAN---AQITVRFVGETEGRTLNAGYRHKDYPT 173

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           NVL+F    A        ++GD+VL   ++E EA    K    H  HL++HG LH  GYD
Sbjct: 174 NVLTF----AYDPAPDGTVIGDLVLCCPVVEKEAREQDKPLAAHYAHLLVHGALHAQGYD 229

Query: 142 H-VDDKDACVMEGLERSILEDLGINDPY 168
           H   D+DA  ME LE  IL  LG  +PY
Sbjct: 230 HETSDEDAAEMEALEVDILAKLGFPNPY 257


>gi|147677227|ref|YP_001211442.1| putative metalloprotease [Pelotomaculum thermopropionicum SI]
 gi|189040627|sp|A5D3W2|RRMF_PELTS RecName: Full=Probable rRNA maturation factor
 gi|146273324|dbj|BAF59073.1| predicted metal-dependent hydrolase [Pelotomaculum
           thermopropionicum SI]
          Length = 152

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 15/157 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L  ++AV+ AL G  +  R   EV        L ++GY  +    E+SLVF D   I  L
Sbjct: 8   LQGKVAVDEALTG--LLTRAAQEV--------LKAEGYGEE---AEVSLVFVDDAYIHGL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YRG+D PT+VLSF        + G   L+LGD+V++ +  E +A   G   +    +
Sbjct: 55  NRQYRGVDAPTDVLSFAMQEGEPLAGGEEELILGDVVISLQAAERQAGEYGHSLQREAAY 114

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L +HG LHLLGYDH  +++  +M   E  +L  L + 
Sbjct: 115 LAVHGVLHLLGYDHQGEEERKIMRRKEEEVLGRLNLT 151


>gi|319943042|ref|ZP_08017325.1| metal-dependent hydrolase [Lautropia mirabilis ATCC 51599]
 gi|319743584|gb|EFV95988.1| metal-dependent hydrolase [Lautropia mirabilis ATCC 51599]
          Length = 187

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           E   EL L F        LN +YRG D+ TNVL+F  A         ++  DIV+   ++
Sbjct: 72  EADAELVLRFVGREESRQLNHQYRGKDRSTNVLTFDYAH------EPVVQADIVICLPVL 125

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           + EA+   K   NHL HL+IHG LH  G DH+ D++A  ME  E  +L    I+DPY +
Sbjct: 126 QDEAHTQNKPLRNHLAHLVIHGVLHAHGMDHLTDEEAAEMESREIELLHRFRIDDPYRL 184


>gi|161523783|ref|YP_001578795.1| fused unkown domain/putative metalloprotease [Burkholderia
           multivorans ATCC 17616]
 gi|221200107|ref|ZP_03573150.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 gi|221206740|ref|ZP_03579752.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221211287|ref|ZP_03584266.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|160341212|gb|ABX14298.1| protein of unknown function UPF0054 [Burkholderia multivorans ATCC
           17616]
 gi|221168648|gb|EEE01116.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221173395|gb|EEE05830.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221180346|gb|EEE12750.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 237

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           +GDEI       +   K ++  +    F      ++++ F       TLN  YR  D PT
Sbjct: 96  YGDEITSEVRKTLPKRKLIAEWLEPALFAN---AQITVRFVGETEGRTLNAGYRHKDYPT 152

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           NVL+F    A        ++GD+VL   ++E EA    K    H  HL++HG LH  GYD
Sbjct: 153 NVLTF----AYDPAPDGTVIGDLVLCCPVVEKEAREQDKPLAAHYAHLLVHGALHAQGYD 208

Query: 142 H-VDDKDACVMEGLERSILEDLGINDPY 168
           H   D+DA  ME LE  IL  LG  +PY
Sbjct: 209 HETSDEDAAEMEALEVDILAKLGFPNPY 236


>gi|22125096|ref|NP_668519.1| putative metalloprotease [Yersinia pestis KIM 10]
 gi|45440925|ref|NP_992464.1| putative metalloprotease [Yersinia pestis biovar Microtus str.
           91001]
 gi|108808472|ref|YP_652388.1| putative metalloprotease [Yersinia pestis Antiqua]
 gi|108811268|ref|YP_647035.1| putative metalloprotease [Yersinia pestis Nepal516]
 gi|145599897|ref|YP_001163973.1| putative metalloprotease [Yersinia pestis Pestoides F]
 gi|149365481|ref|ZP_01887516.1| hypothetical protein YPE_0646 [Yersinia pestis CA88-4125]
 gi|162421082|ref|YP_001606319.1| putative metalloprotease [Yersinia pestis Angola]
 gi|165925376|ref|ZP_02221208.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937587|ref|ZP_02226149.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008624|ref|ZP_02229522.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212421|ref|ZP_02238456.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399628|ref|ZP_02305152.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167422550|ref|ZP_02314303.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423805|ref|ZP_02315558.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467946|ref|ZP_02332650.1| hypothetical protein YpesF_08614 [Yersinia pestis FV-1]
 gi|218929699|ref|YP_002347574.1| putative metalloprotease [Yersinia pestis CO92]
 gi|229838166|ref|ZP_04458325.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229895958|ref|ZP_04511128.1| conserved protein [Yersinia pestis Pestoides A]
 gi|229898723|ref|ZP_04513868.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901506|ref|ZP_04516628.1| conserved protein [Yersinia pestis Nepal516]
 gi|270489692|ref|ZP_06206766.1| metalloprotein, YbeY/ UPF0054family [Yersinia pestis KIM D27]
 gi|294504422|ref|YP_003568484.1| hypothetical protein YPZ3_2312 [Yersinia pestis Z176003]
 gi|26006931|sp|Q8ZDF0|RRMF_YERPE RecName: Full=Probable rRNA maturation factor
 gi|123245656|sp|Q1C529|RRMF_YERPA RecName: Full=Probable rRNA maturation factor
 gi|123246625|sp|Q1CKP5|RRMF_YERPN RecName: Full=Probable rRNA maturation factor
 gi|166228416|sp|A4TNY8|RRMF_YERPP RecName: Full=Probable rRNA maturation factor
 gi|226701655|sp|A9R6Y0|RRMF_YERPG RecName: Full=Probable rRNA maturation factor
 gi|21957951|gb|AAM84770.1|AE013722_9 hypothetical protein y1193 [Yersinia pestis KIM 10]
 gi|45435784|gb|AAS61341.1| Predicted metal-dependent hydrolase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108774916|gb|ABG17435.1| hypothetical protein YPN_1104 [Yersinia pestis Nepal516]
 gi|108780385|gb|ABG14443.1| hypothetical protein YPA_2479 [Yersinia pestis Antiqua]
 gi|115348310|emb|CAL21241.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|145211593|gb|ABP41000.1| hypothetical protein YPDSF_2634 [Yersinia pestis Pestoides F]
 gi|149291894|gb|EDM41968.1| hypothetical protein YPE_0646 [Yersinia pestis CA88-4125]
 gi|162353897|gb|ABX87845.1| conserved hypothetical protein TIGR00043 [Yersinia pestis Angola]
 gi|165914337|gb|EDR32952.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922983|gb|EDR40134.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165993006|gb|EDR45307.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206352|gb|EDR50832.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166958564|gb|EDR55585.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167052132|gb|EDR63540.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057975|gb|EDR67721.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229681435|gb|EEO77529.1| conserved protein [Yersinia pestis Nepal516]
 gi|229688271|gb|EEO80342.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229694532|gb|EEO84579.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700881|gb|EEO88910.1| conserved protein [Yersinia pestis Pestoides A]
 gi|262362588|gb|ACY59309.1| hypothetical protein YPD4_2402 [Yersinia pestis D106004]
 gi|262366408|gb|ACY62965.1| hypothetical protein YPD8_2290 [Yersinia pestis D182038]
 gi|270338196|gb|EFA48973.1| metalloprotein, YbeY/ UPF0054family [Yersinia pestis KIM D27]
 gi|294354881|gb|ADE65222.1| hypothetical protein YPZ3_2312 [Yersinia pestis Z176003]
 gi|320016177|gb|ADV99748.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 157

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 2/117 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++
Sbjct: 36  QPVSEVTIRLVDEAESHDLNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVV 93

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E EA    K    H  H+++HG LHLLGYDH+DD++A  ME +E  I+  LG  DPY
Sbjct: 94  EKEAIEQEKALLAHWAHMVVHGSLHLLGYDHIDDEEAEEMELIETEIMHGLGYPDPY 150


>gi|237747923|ref|ZP_04578403.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229379285|gb|EEO29376.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 166

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 18/131 (13%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSS-------------- 98
           ++L F D+    TLN EYR  D  TNVL+FP      F  +D   S              
Sbjct: 35  ITLRFVDAEEGRTLNREYREKDYATNVLTFPYDDMDEFDLTDAVPSRPEPEADRDDIPEQ 94

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           +   DIVL  +++E EA   GK  E H  HL++HG LH  GYDH++D++A  ME LE+ I
Sbjct: 95  MAQADIVLCTDVLEKEAKEQGKSLEAHAAHLVVHGTLHAQGYDHLNDEEAEEMETLEKQI 154

Query: 159 LEDLGINDPYE 169
           L  LGI +PYE
Sbjct: 155 LAKLGIANPYE 165


>gi|225025308|ref|ZP_03714500.1| hypothetical protein EIKCOROL_02206 [Eikenella corrodens ATCC
           23834]
 gi|224941926|gb|EEG23135.1| hypothetical protein EIKCOROL_02206 [Eikenella corrodens ATCC
           23834]
          Length = 175

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 10/145 (6%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----- 87
           E  F +     +   Y       E+ L+  D       N +YR  D  TNVLSF      
Sbjct: 33  EAQFRRWAWQAVKSQY----RRAEIGLLLLDEETARAYNRDYRQKDYATNVLSFALDEGE 88

Query: 88  -TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A A   G   ++ GD+V+  +++  EA   GK  E H  HL +HG LHL+G+DH++  
Sbjct: 89  QAALAGLSGSLPVLRGDLVICPQVVVREAAEQGKILEAHFAHLTLHGVLHLMGHDHIEPD 148

Query: 147 DACVMEGLERSILEDLGINDPYEVD 171
           +A  ME LE  ++  LG  +PY  D
Sbjct: 149 EAEAMEALEIRLMNQLGYPNPYAQD 173


>gi|255020723|ref|ZP_05292783.1| hypothetical protein ACA_1687 [Acidithiobacillus caldus ATCC 51756]
 gi|254969839|gb|EET27341.1| hypothetical protein ACA_1687 [Acidithiobacillus caldus ATCC 51756]
          Length = 169

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 7/144 (4%)

Query: 29  RTLCEVVFAKAV---SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + LC    A A+   S  ++ G  V+   + LSL F  +  +  LN ++R    PTN LS
Sbjct: 25  QRLCRTAIAAALTVPSPRLANGDGVR---IGLSLAFVGAAAMAELNGQFRQRPYPTNCLS 81

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           FPT  + +       LGDIVLA  I+  EA   GK   +H  HL+IH  LHLLG+DH + 
Sbjct: 82  FPTP-SGAGPYRQDFLGDIVLAPAIVLREAVEQGKRPADHYRHLLIHSTLHLLGFDHEEA 140

Query: 146 KDACVMEGLERSILEDLGINDPYE 169
            +A  ME LE  +L  +G+ DPY+
Sbjct: 141 AEAAEMEALETHLLAQMGVADPYQ 164


>gi|312898796|ref|ZP_07758184.1| conserved hypothetical protein TIGR00043 [Megasphaera
           micronuciformis F0359]
 gi|310619958|gb|EFQ03530.1| conserved hypothetical protein TIGR00043 [Megasphaera
           micronuciformis F0359]
          Length = 157

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 3/113 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAYEII 111
            ELS+V  D+  I  LN  YR ID+PT+VLSF          DG  + +LGDIV++ +  
Sbjct: 38  AELSVVLCDNAYIHELNKTYRNIDRPTDVLSFALNEGEEEGYDGPDTKLLGDIVISLDKT 97

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             ++   G  FE  L +L +HG LH+LGYDH+ D+D   M   E  +L  LG 
Sbjct: 98  REQSEEYGHSFERELAYLTVHGMLHILGYDHMTDEDKAEMRKEEEFVLHRLGF 150


>gi|88606960|ref|YP_505804.1| hypothetical protein APH_1290 [Anaplasma phagocytophilum HZ]
 gi|123494243|sp|Q2GIJ7|RRMF_ANAPZ RecName: Full=Probable rRNA maturation factor
 gi|88598023|gb|ABD43493.1| conserved hypothetical protein TIGR00043 [Anaplasma phagocytophilum
           HZ]
          Length = 154

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 4/99 (4%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YR I+KPTNVLSF     S + C    LG+I L+ + +  E+  LG E   H  H+
Sbjct: 56  LNHKYRNINKPTNVLSFNYEALSHNCC----LGEIFLSIDRLTYESKTLGVEVHAHFTHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +IHG LH+LGYDH   +DA  M+ LE  +L    I +PY
Sbjct: 112 LIHGVLHILGYDHEVPEDAQEMQALEIDLLSKRSIENPY 150


>gi|300173400|ref|YP_003772566.1| putative metalloprotease [Leuconostoc gasicomitatum LMG 18811]
 gi|299887779|emb|CBL91747.1| Putative metalloprotease [Leuconostoc gasicomitatum LMG 18811]
          Length = 160

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 15/123 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------------LG 102
            E+S+ F +S  I+  N EYRG+DKPT+V+SF  A    D    L             +G
Sbjct: 38  TEMSVTFVNSDEIQRYNREYRGVDKPTDVISF--ALEEGDDTFDLSPEGDWADDIPKNIG 95

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILED 161
           DI+++ +II  +A+ LG  +E  L  L++HGFLHL GYDH+  D +   M  L+R IL+D
Sbjct: 96  DILVSVDIIASQADYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFDLQRKILDD 155

Query: 162 LGI 164
            G+
Sbjct: 156 YGL 158


>gi|325981204|ref|YP_004293606.1| hypothetical protein NAL212_0499 [Nitrosomonas sp. AL212]
 gi|325530723|gb|ADZ25444.1| protein of unknown function UPF0054 [Nitrosomonas sp. AL212]
          Length = 168

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 76/166 (45%), Gaps = 21/166 (12%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           V++ N  RL +Q A E             C  V  +      +K   ++E  V L LV  
Sbjct: 15  VQRANSFRLMVQYATE-------------CTAVPGRPQFRRWAKVALMQEAEVVLRLV-- 59

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D      LN ++R  +  TNVL+F       D    L  GDI+L   +I  EA    K  
Sbjct: 60  DEKEGRELNQQFRNKNYATNVLTF-----VYDDAEPLT-GDIILCAPVISEEAQQQNKNL 113

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             H  HL IHG LHL GYDH++D DA  ME LE  IL  LG  +PY
Sbjct: 114 MAHYAHLTIHGLLHLQGYDHIEDSDATAMEQLEIQILTKLGFTNPY 159


>gi|258516221|ref|YP_003192443.1| putative metalloprotease [Desulfotomaculum acetoxidans DSM 771]
 gi|257779926|gb|ACV63820.1| protein of unknown function UPF0054 [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 154

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 5/108 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEII 111
           E+SLV TD   I  LN +YRG+D+PT+VLSF         +++    L LGD++++ E  
Sbjct: 40  EVSLVLTDDRYIHELNRDYRGVDRPTDVLSFAQNEGEQLQAAEEAEEL-LGDVIISLETA 98

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           E +A   G  FE     L +HG LHLL YDH++++D  +M   E   +
Sbjct: 99  ERQAEEYGHSFEREAAFLTVHGVLHLLAYDHIEEEDRVIMRSKEEEAM 146


>gi|254995418|ref|ZP_05277608.1| hypothetical protein AmarM_05793 [Anaplasma marginale str.
           Mississippi]
          Length = 154

 Score = 84.0 bits (206), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 4/99 (4%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRGI K TNVLSF     S   C    LG+I L+ E I  E+  +     +H  H+
Sbjct: 55  LNSQYRGIHKATNVLSFSYEKLSPGCC----LGEIYLSMERIAEESLEMDVAVRSHFFHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +IHG LH+LGYDH + +DA  M+ LE  +L  LGI +PY
Sbjct: 111 LIHGMLHILGYDHEEPEDAITMQALEVGLLAKLGIRNPY 149


>gi|332981673|ref|YP_004463114.1| hypothetical protein Mahau_1094 [Mahella australiensis 50-1 BON]
 gi|332699351|gb|AEE96292.1| protein of unknown function UPF0054 [Mahella australiensis 50-1
           BON]
          Length = 161

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 10/120 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDG---------CSSLMLGDI 104
           +E+S++  D+ +I+ LN ++RGID+ T+VLSFP   + S +G            L+LGDI
Sbjct: 39  IEVSIILIDNEQIKELNRDFRGIDRETDVLSFPAIDYESDEGEPVEDINMDTGDLILGDI 98

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            ++ E    +A   G  F   +  L +HG  HLLGYDH D+++A +M   E  +L  LG+
Sbjct: 99  AISVEKAAQQAEEYGHSFYREMGFLTVHGMFHLLGYDHEDEEEATIMRQREEMVLSSLGL 158


>gi|118594512|ref|ZP_01551859.1| hypothetical protein MB2181_02550 [Methylophilales bacterium
           HTCC2181]
 gi|118440290|gb|EAV46917.1| hypothetical protein MB2181_02550 [Methylophilales bacterium
           HTCC2181]
          Length = 153

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 18/135 (13%)

Query: 45  SKGYFVKENIVELSLVFTDSH-----------RIETLNFEYRGIDKPTNVLSFPTAFASS 93
            + Y  K+N  +   VF D +             + LN  YR ++K TNVLSF       
Sbjct: 17  QRKYLSKKNCYQWLSVFKDCNLTLTIRLVGESESKNLNNSYRNLNKATNVLSFQIE---- 72

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                 ++GD+VL + I++ EA +  K+  +H  HL+IHG LHL+G DH ++ DA  ME 
Sbjct: 73  ---DKPIIGDLVLCHAIVKKEARIQRKKIHDHYAHLLIHGCLHLMGLDHENEDDADAMEK 129

Query: 154 LERSILEDLGINDPY 168
            E  +LE LGI +PY
Sbjct: 130 KEILLLEKLGIKNPY 144


>gi|329891158|ref|ZP_08269501.1| uncharacterized protein family UPF0054 family protein
           [Brevundimonas diminuta ATCC 11568]
 gi|328846459|gb|EGF96023.1| uncharacterized protein family UPF0054 family protein
           [Brevundimonas diminuta ATCC 11568]
          Length = 156

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 5/113 (4%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++  D   ++ LN  +R  D+PTNVLSFP A ++        LGD+VL Y     EA   
Sbjct: 39  VLLADDAAVQDLNKRFRDKDRPTNVLSFPAAESAFP-----HLGDVVLGYAYCAAEAETQ 93

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +HL HL++HG LHLLG DH DD +A  ME  ER IL +LG+ DPY  +
Sbjct: 94  GKTLSDHLSHLVVHGVLHLLGRDHEDDAEAEEMEAEEREILAELGVADPYAAE 146


>gi|257454806|ref|ZP_05620057.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
 gi|257447739|gb|EEV22731.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
          Length = 208

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 73/126 (57%), Gaps = 3/126 (2%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDI 104
           G F+ +  VEL +  T+      +N + RG D  TN+LS+ +    +  +   +L LG++
Sbjct: 83  GEFIFQKTVELEIYVTEPVEARAINLDARGKDYATNILSYASELPEAVLELLPALPLGEL 142

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLG 163
           V+ + ++  +A   GK  E HL HL++HG LHLLG+DH +   +   ME +E ++L+ L 
Sbjct: 143 VICHAVVVSQAAEQGKTVEQHLTHLLVHGMLHLLGFDHELGQAEQDEMEAIEIAVLDKLS 202

Query: 164 INDPYE 169
           + +PYE
Sbjct: 203 VANPYE 208


>gi|89100467|ref|ZP_01173329.1| hypothetical protein B14911_05536 [Bacillus sp. NRRL B-14911]
 gi|89084810|gb|EAR63949.1| hypothetical protein B14911_05536 [Bacillus sp. NRRL B-14911]
          Length = 156

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 11/124 (8%)

Query: 51  KENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-------M 100
           KEN+    ELS+ F  + RI+ +N EYR  DKPT+V+SF       +G + +       +
Sbjct: 32  KENVEAGSELSVTFVTNDRIQEINREYRDKDKPTDVISFAME-ELGEGETEIAGEGIPRV 90

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDI+++ +  E +A   G  FE  L  L +HGFLHLLGYDH  D++   M G ++ IL+
Sbjct: 91  LGDIIISIQRTEEQAGEYGHSFERELGFLAVHGFLHLLGYDHETDEEEREMFGRQKDILD 150

Query: 161 DLGI 164
           + G+
Sbjct: 151 EYGL 154


>gi|315651385|ref|ZP_07904410.1| metal-dependent hydrolase [Eubacterium saburreum DSM 3986]
 gi|315486344|gb|EFU76701.1| metal-dependent hydrolase [Eubacterium saburreum DSM 3986]
          Length = 168

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---------------CSSL 99
            E+S+   D   I  +N EYRGIDK T+VLSFP     S G                  L
Sbjct: 42  AEVSVTIVDDEEIRKINSEYRGIDKSTDVLSFPFNEFESPGNFDDIEESVDAFNPESGEL 101

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDI+L+ E I  +A   G      L  L++H  LHL+GYDH+ D+D  +ME  +R IL
Sbjct: 102 LLGDIILSTEHIIEQAREYGHSETRELAFLVVHSMLHLMGYDHIADEDRVIMEDRQRKIL 161

Query: 160 EDLGIN 165
           +  GI+
Sbjct: 162 DLEGIS 167


>gi|189183988|ref|YP_001937773.1| putative metalloprotease [Orientia tsutsugamushi str. Ikeda]
 gi|189180759|dbj|BAG40539.1| hypothetical protein OTT_1081 [Orientia tsutsugamushi str. Ikeda]
          Length = 167

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 11/160 (6%)

Query: 18  ENALWGD--EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           ++++W +  EI+L  + +++      N+ +K   V++   E++++ T+ H ++ LNF +R
Sbjct: 10  QHSIWRNHKEINLCYVKKIIKTTLYHNIFAKLQSVQQ--AEVAILLTNDHEMQNLNFTHR 67

Query: 76  GIDKPTNVLSFPTAFASSDGCSSL-------MLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            I+KPTNVLSFP         S+L        LGDI   Y  I  EA    K F NH  H
Sbjct: 68  KINKPTNVLSFPDQVLDWQNLSTLDIQDNYIYLGDIAFGYNTIAKEAVEQQKTFINHFTH 127

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L+IH  LHLLG+DH  D +A +ME LE ++L    I  PY
Sbjct: 128 LLIHAILHLLGFDHQHDSEAIIMEELEVNLLAKFSIASPY 167


>gi|319940869|ref|ZP_08015208.1| hypothetical protein HMPREF9464_00427 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805751|gb|EFW02532.1| hypothetical protein HMPREF9464_00427 [Sutterella wadsworthensis
           3_1_45B]
          Length = 152

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 6/113 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E ++ F D      LN ++R  D  TNVL+F            +++ DIV+   ++E +A
Sbjct: 37  EFTVRFVDEEEGRELNHQFRRKDYATNVLTFDYQ------REPVVMADIVICPAVLERQA 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +HL HL+IHG LH  GYDH+DD++A VME  E  I+E LG  +PY
Sbjct: 91  AEQQKPLRDHLAHLLIHGVLHAQGYDHLDDEEAEVMEARETEIMESLGFPNPY 143


>gi|74318722|ref|YP_316462.1| hypothetical protein Tbd_2704 [Thiobacillus denitrificans ATCC
           25259]
 gi|123611152|sp|Q3SFF3|RRMF_THIDA RecName: Full=Probable rRNA maturation factor
 gi|74058217|gb|AAZ98657.1| Protein of unknown function UPF0054 [Thiobacillus denitrificans
           ATCC 25259]
          Length = 147

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 10/141 (7%)

Query: 34  VVFAKAVSNLISKGYFVK------ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           V FA    +L S+    +      E+  E+++   D+   + LN  YR  D   NVL+F 
Sbjct: 9   VQFASGADDLPSRAQIRRWVAAALEHDAEITVRIVDADEAQALNRAYRDKDYVPNVLTF- 67

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                 +   +L+ GD+V+   ++E EA   GK   +H  H+ +HG LHL GYDHVD  D
Sbjct: 68  ---EYGEIAPALLGGDVVICAPVVEREAREQGKPLGHHYAHMTVHGVLHLQGYDHVDAAD 124

Query: 148 ACVMEGLERSILEDLGINDPY 168
           A  ME  E +IL+   I  PY
Sbjct: 125 AERMETREAAILKRFHIPHPY 145


>gi|33519779|ref|NP_878611.1| hypothetical protein Bfl316 [Candidatus Blochmannia floridanus]
 gi|46577400|sp|Q7VRA3|RRMF_BLOFL RecName: Full=Probable rRNA maturation factor
 gi|33504124|emb|CAD83386.1| predicted metal-dependent hydrolase [Candidatus Blochmannia
           floridanus]
          Length = 153

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 2/108 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++   D   +  LN+ Y G   PTNVLSFP  F       + +LGDIV+  +IIE E 
Sbjct: 41  ELTIRIVDIQEMLYLNWYYLGKKYPTNVLSFP--FEPPSEIQTSLLGDIVICKQIIEYEN 98

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
                  + H  H+IIHG LHLLGYDH+ D+DA +M  +E +I+  LG
Sbjct: 99  RKNNIFSDVHWAHMIIHGSLHLLGYDHICDEDAELMNAMELNIIRTLG 146


>gi|309790640|ref|ZP_07685193.1| protein of unknown function UPF0054 [Oscillochloris trichoides DG6]
 gi|308227306|gb|EFO80981.1| protein of unknown function UPF0054 [Oscillochloris trichoides DG6]
          Length = 161

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 7/116 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----PTAFASSDGCSSLMLGDIVLAYEI 110
           E+ ++ TD   I TLN +YRG+D PT+VLSF     P+AF  + G     LGDI ++Y+ 
Sbjct: 44  EVGVLITDDAHIHTLNRDYRGVDAPTDVLSFADDGPPSAFVVA-GSGPRYLGDIAISYQR 102

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGIN 165
           +  +A   G      L +L  HG LHLLGYDH    +DA  M   E +++ +LG++
Sbjct: 103 VLAQAAEYGHSPARELAYLATHGTLHLLGYDHERGPEDAAAMRLREETVMAELGLS 158


>gi|167758251|ref|ZP_02430378.1| hypothetical protein CLOSCI_00589 [Clostridium scindens ATCC 35704]
 gi|167664148|gb|EDS08278.1| hypothetical protein CLOSCI_00589 [Clostridium scindens ATCC 35704]
          Length = 164

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 15/124 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGC-----SSLM 100
           E+SL+ T +  I  +N ++RGID+PT+VLSFP               SD C       LM
Sbjct: 39  EVSLLLTQNEEIRKMNRDFRGIDRPTDVLSFPMTDYPVPGQFGFLEESDDCFHPESGELM 98

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDIV++ E +  +A   G         LI H  LHL+GYDH+ D++  +ME  ++ I+E
Sbjct: 99  LGDIVISKEKVLSQAEEFGHSALREYAFLIAHSVLHLIGYDHMQDEERQIMERKQKEIME 158

Query: 161 DLGI 164
            L I
Sbjct: 159 RLNI 162


>gi|205374159|ref|ZP_03226959.1| putative metalloprotease [Bacillus coahuilensis m4-4]
          Length = 158

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 6/116 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAYE 109
           E+SL F  + RI+ +N EYR  D+PT+V+SF       +    +      +LGDI+++ E
Sbjct: 41  EVSLTFVTNERIQQVNREYRDKDQPTDVISFALEEMDENEIRIIGEGIPRVLGDIIISVE 100

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
               +A+  G  F+  L  L +HGFLHLLGYDH++++D  VM   ++ IL++ G+ 
Sbjct: 101 RTREQASEYGHSFQRELGFLALHGFLHLLGYDHINEQDEKVMFQRQKDILDEFGLK 156


>gi|169832186|ref|YP_001718168.1| cytidine deaminase [Candidatus Desulforudis audaxviator MP104C]
 gi|169639030|gb|ACA60536.1| cytidine deaminase [Candidatus Desulforudis audaxviator MP104C]
          Length = 301

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 8/141 (5%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---F 90
            +  +AV + ++ G       VE+S+   D   I  LN  +RG D+PT+VLSFP      
Sbjct: 20  ALITRAVESALAGG---DRRRVEVSVALVDDEYIHDLNRRFRGQDRPTDVLSFPMGEEEP 76

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
            + D    L+LGD+V++      +A   G   +  +  L +HG LHLLGYDH  D+DA  
Sbjct: 77  GAGDEPGVLLLGDVVISLPAAARQAAEYGHGLDREVARLAVHGTLHLLGYDHEQDEDASR 136

Query: 151 MEGLERSILEDLGIND--PYE 169
           M+  E ++L  LG     P+E
Sbjct: 137 MQEREDAVLAVLGKRGTVPWE 157


>gi|225175056|ref|ZP_03729052.1| protein of unknown function UPF0054 [Dethiobacter alkaliphilus AHT
           1]
 gi|225169232|gb|EEG78030.1| protein of unknown function UPF0054 [Dethiobacter alkaliphilus AHT
           1]
          Length = 155

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 8/128 (6%)

Query: 43  LISKGYFVKENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDG 95
           +I+K   V  N     E+SL   D   I  LN  +R +D PT+VLSFP           G
Sbjct: 23  IITKAALVDHNFPSDAEVSLTLCDDATIHELNKTWRSVDAPTDVLSFPLLGDMTLKVPPG 82

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
              LMLGD++++ E    +A   G   E  +++L +HG LHLLGYDH+++++   M  LE
Sbjct: 83  -EELMLGDVIISVERARAQAQEFGHSVEREILYLYVHGLLHLLGYDHLEEEEKREMRSLE 141

Query: 156 RSILEDLG 163
             +L+++G
Sbjct: 142 EKLLKEVG 149


>gi|325290529|ref|YP_004266710.1| metalloprotease ybeY [Syntrophobotulus glycolicus DSM 8271]
 gi|324965930|gb|ADY56709.1| metalloprotease ybeY [Syntrophobotulus glycolicus DSM 8271]
          Length = 168

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 18/149 (12%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----- 86
            EV+ A+ ++  + +    +    E+ ++FTD+  I  LN +YRGID PT+VLSF     
Sbjct: 20  WEVLIAQGITRALQEAEGPENG--EIGVLFTDNETIRGLNRDYRGIDNPTDVLSFALQEK 77

Query: 87  ----PTAF-----ASSDGCSSL--MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
               P  +        DG   L  MLGDIV++ +    +A   G   E  +V L +HG L
Sbjct: 78  TEEEPDIYFHHDEDQDDGFPDLGAMLGDIVISVQRAREQAAEYGHSLEREIVFLAVHGTL 137

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HLLGYDH  ++    M  LE  I+E +G+
Sbjct: 138 HLLGYDHQTEEQRSGMRELEERIMEKIGL 166


>gi|291550420|emb|CBL26682.1| conserved hypothetical protein TIGR00043 [Ruminococcus torques
           L2-14]
          Length = 165

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------------TAFASSDGCSS 98
            E++L+ T++ +I  +N E RGID+PT+VLSFP                +A A +     
Sbjct: 38  AEINLLLTENAQIHEMNLEQRGIDRPTDVLSFPMIEYEEPGDFSVIDEESAEAFNPESGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           LMLGDIV++ E +  +A   G   +     LI H  LHL GYDH+ D++  VME  ++ I
Sbjct: 98  LMLGDIVISKEKVLSQAEEYGHLPKREYAFLIAHSMLHLFGYDHMVDEERVVMEAKQKEI 157

Query: 159 LEDLGI 164
           +E +GI
Sbjct: 158 MEKVGI 163


>gi|313895824|ref|ZP_07829378.1| translation metalloprotein YbeY [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975249|gb|EFR40710.1| translation metalloprotein YbeY [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 154

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           GDE  +R   E V           G        E+S+  T+   I  +N +YRG+D+PT+
Sbjct: 18  GDEAAVRRAVETV-----------GRLYGAEGAEVSVTLTNDAYIHEINRQYRGVDRPTD 66

Query: 83  VLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           V+SF    +      D  +  +LGD+V++ E    +A   G  +   L  L +HG LHLL
Sbjct: 67  VISFALMESEEPEILDDPAGDVLGDLVISLERARAQAEEYGHSYLRELSFLTVHGMLHLL 126

Query: 139 GYDHVDDKDACVMEGLERSILEDLGIN 165
           GYDH++D +   ME  +R ++E LGI 
Sbjct: 127 GYDHMEDAERAEMEEEQRHVMEALGIG 153


>gi|145590039|ref|YP_001156636.1| hypothetical protein Pnuc_1860 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189039044|sp|A4T008|RRMF_POLSQ RecName: Full=Probable rRNA maturation factor
 gi|145048445|gb|ABP35072.1| protein of unknown function UPF0054 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 155

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L+L F +S   + LN  +R     TNVL+FP      +   S +  DI+    +I  EA 
Sbjct: 45  LTLRFVNSTEGKKLNAAFRKKHYATNVLTFPY-----EHSKSALSADIIFCLPVIRKEAK 99

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             GK  + HL HLI+HG LH  G+DH  +K+   ME LE ++L+ LG  DPY
Sbjct: 100 EQGKTVKAHLAHLIVHGCLHAQGFDHEHEKETKKMEKLEVALLKKLGFTDPY 151


>gi|315645981|ref|ZP_07899102.1| hypothetical protein PVOR_11039 [Paenibacillus vortex V453]
 gi|315278742|gb|EFU42056.1| hypothetical protein PVOR_11039 [Paenibacillus vortex V453]
          Length = 165

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 14/124 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--------------ML 101
           E+ L F D  +I  LN EYRGID+PT+VLSF     ++D    +              +L
Sbjct: 41  EVDLTFVDDGQIHELNREYRGIDRPTDVLSFAMNEITNDELEIIYELDEGEELESVPDVL 100

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI+++ +  ++++   G   E  L  L +HGFLHLLGYDH D+     M G + ++L +
Sbjct: 101 GDIIISVQRAKLQSEEYGHSLERELGFLFVHGFLHLLGYDHQDEASEAAMMGKQEAVLAE 160

Query: 162 LGIN 165
           +G+ 
Sbjct: 161 VGLT 164


>gi|303228961|ref|ZP_07315771.1| translation metalloprotein YbeY [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516375|gb|EFL58307.1| translation metalloprotein YbeY [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 158

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 18/166 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +QI+ ++ +  D     T  E V  K V + +S+ Y ++++  ELS++  D+ +I  L
Sbjct: 1   MHIQISYDDGIARD-----TKIEEVIQK-VCDEVSRVYGLEDD--ELSILLCDNKKIHEL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYEIIEIEANVLGKEFENH 125
           N EYRGID+PT+VLSF  A    D          +LGD++L+ E    +A   G  FE  
Sbjct: 53  NKEYRGIDRPTDVLSF--ALNEGDDYEGSEEEHHLLGDMILSLERAHEQAVEYGHSFERE 110

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI---NDPY 168
           L +L  H  LH+LGYDH+ D+D   M   E  +L +LG    + PY
Sbjct: 111 LAYLTTHSCLHILGYDHMTDEDKKEMRTEEEFVLSNLGYVREDQPY 156


>gi|167746974|ref|ZP_02419101.1| hypothetical protein ANACAC_01686 [Anaerostipes caccae DSM 14662]
 gi|167653934|gb|EDR98063.1| hypothetical protein ANACAC_01686 [Anaerostipes caccae DSM 14662]
          Length = 165

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 17/144 (11%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
           CE++  + V   +   Y       E++L+   ++ I  +N E RGID+PT+VLSFP    
Sbjct: 17  CEMIAGQVVEAAVD--YVTCPFECEVNLMLVGNNEIHRINLEQRGIDRPTDVLSFPMVEY 74

Query: 92  SSDGC---------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
              GC                 LMLGDIV++ +  + +A   G   E     LI H  LH
Sbjct: 75  EKPGCFDGLEEDPAAFHPDSGELMLGDIVISMDKAKEQAEAYGHSLEREYAFLIAHSMLH 134

Query: 137 LLGYDHVDDKDACVMEGLERSILE 160
           L GYDH++D++  VME  +  IL+
Sbjct: 135 LFGYDHMEDEERAVMEEKQEEILQ 158


>gi|323703317|ref|ZP_08114967.1| protein of unknown function UPF0054 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531680|gb|EGB21569.1| protein of unknown function UPF0054 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 153

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 6/138 (4%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L ++V A  + +L ++GY  +    E+ L+F D   I++LN EYRGIDKPT+VLSF    
Sbjct: 18  LYQLVEAVVMESLKAEGYSTE---AEVGLIFVDDGYIQSLNAEYRGIDKPTDVLSFAMHE 74

Query: 91  ASSDGCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                       +LGDIV++      ++   G  FE  +  L  HG LHLLGYDH  + +
Sbjct: 75  GEPMPEEEEAEDLLGDIVISLPTALRQSKEYGHSFEREVAFLTAHGALHLLGYDHQTEAE 134

Query: 148 ACVMEGLERSILEDLGIN 165
             VM   E +IL  L I 
Sbjct: 135 RQVMREKEEAILGRLNIT 152


>gi|229086872|ref|ZP_04219032.1| metalloprotease [Bacillus cereus Rock3-44]
 gi|228696447|gb|EEL49272.1| metalloprotease [Bacillus cereus Rock3-44]
          Length = 136

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI+ +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 16  EDGTELSVTFVDNERIQEINRDYRDKDQPTDVISFAMEDMGEGEMEIVGVEMPRMLGDLI 75

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ D+D   M G ++ ILE  G+ 
Sbjct: 76  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTDEDEKEMFGKQKEILEAFGLG 135


>gi|269958362|ref|YP_003328149.1| hypothetical protein ACIS_00135 [Anaplasma centrale str. Israel]
 gi|269848191|gb|ACZ48835.1| hypothetical protein ACIS_00135 [Anaplasma centrale str. Israel]
          Length = 154

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 4/99 (4%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRGI K TNVLSF     S   C    LG+I L+ E I  E+  +     +H  H+
Sbjct: 55  LNSQYRGIHKATNVLSFSYEKLSPGCC----LGEIYLSMERIAEESLEMDVAVRSHFFHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +IHG LH+LGYDH + ++A  M+ LE  +L  LGI +PY
Sbjct: 111 LIHGMLHILGYDHEEPEEATTMQALEVGLLAKLGIRNPY 149


>gi|330818259|ref|YP_004361964.1| hypothetical protein bgla_1g34050 [Burkholderia gladioli BSR3]
 gi|327370652|gb|AEA62008.1| hypothetical protein bgla_1g34050 [Burkholderia gladioli BSR3]
          Length = 269

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 8/148 (5%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           +GDEI      ++   K ++  +S   F   +  +L++ F        LN  YR  D PT
Sbjct: 128 YGDEIAASQRKKLPKPKLIAEWLSTALF---SDAQLTVRFVGEKEGRELNGGYRKKDYPT 184

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           NVL+F    A         +GD+VL   ++E EA    K    H  HL++HG LH  GYD
Sbjct: 185 NVLTF----AYDQAPDGTTIGDLVLCCPVVEKEAGEQDKTLVAHYAHLLVHGALHAQGYD 240

Query: 142 H-VDDKDACVMEGLERSILEDLGINDPY 168
           H   ++DA  ME LE  IL  LG  +PY
Sbjct: 241 HERGEEDAAEMEALEIDILAKLGFPNPY 268


>gi|228993045|ref|ZP_04152968.1| metalloprotease [Bacillus pseudomycoides DSM 12442]
 gi|228766693|gb|EEM15333.1| metalloprotease [Bacillus pseudomycoides DSM 12442]
          Length = 143

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI+ +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGTELSVTFVDNERIQEINRDYRDKDQPTDVISFAMEDMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ D+D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTDEDEQEMFGKQKEILEAFGLG 142


>gi|228999095|ref|ZP_04158677.1| metalloprotease [Bacillus mycoides Rock3-17]
 gi|229006643|ref|ZP_04164277.1| metalloprotease [Bacillus mycoides Rock1-4]
 gi|228754504|gb|EEM03915.1| metalloprotease [Bacillus mycoides Rock1-4]
 gi|228760712|gb|EEM09676.1| metalloprotease [Bacillus mycoides Rock3-17]
          Length = 143

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI+ +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGTELSVTFVDNERIQEINRDYRDKDQPTDVISFAMEDMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ D+D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTDEDEKEMFGKQKEILEAFGLG 142


>gi|332686716|ref|YP_004456490.1| metal-dependent hydrolase [Melissococcus plutonius ATCC 35311]
 gi|332370725|dbj|BAK21681.1| metal-dependent hydrolase [Melissococcus plutonius ATCC 35311]
          Length = 159

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 25/149 (16%)

Query: 41  SNLISKGYFVK--------------ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +N  S+ YF K               +  E+S+ FT + +I+ +N ++RG + PT+V+SF
Sbjct: 9   TNQFSENYFTKIKELLQFSADFLKLPDTTEMSVTFTTNEKIQQINQKFRGKNVPTDVISF 68

Query: 87  PTAFASSDGCSSLM-----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
                  D    ++           LGDI+++ E  E +A   G  FE  L  L +HGFL
Sbjct: 69  ALEDEGEDEFPIILDEMLTSLPPKNLGDIIISIEKAEEQAQDYGHSFERELGFLAVHGFL 128

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HL GYDH++++D   M  L+R IL+D G+
Sbjct: 129 HLNGYDHMNEEDEKEMFDLQRKILDDYGL 157


>gi|332969799|gb|EGK08810.1| metal-dependent hydrolase [Psychrobacter sp. 1501(2011)]
          Length = 184

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 5/117 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +L +  TDS     LN E R  D  TN+LS+P+   AF  ++    + LG++V+ +E++E
Sbjct: 66  QLGVYLTDSVEGRELNLEARDKDYATNILSYPSDLPAFILTEMLE-IALGELVICHEVVE 124

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
            +A    K   +H  HL++HG LHLLG+DH +  ++   MEG E +ILE LGI +PY
Sbjct: 125 QQAREQHKTVADHATHLLVHGILHLLGFDHELGQEEQDEMEGFEIAILEKLGIANPY 181


>gi|317471788|ref|ZP_07931126.1| hypothetical protein HMPREF1011_01475 [Anaerostipes sp. 3_2_56FAA]
 gi|316900714|gb|EFV22690.1| hypothetical protein HMPREF1011_01475 [Anaerostipes sp. 3_2_56FAA]
          Length = 165

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 17/144 (11%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
           CE++  + V   +   Y       E++L+   +  I  +N E RGID+PT+VLSFP    
Sbjct: 17  CEMIAGQVVEAAVD--YVTCPFECEVNLMLVGNEEIHRINLEQRGIDRPTDVLSFPMIEY 74

Query: 92  SSDGC---------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            + GC                 LMLGDIV++ +  + +A   G   E     LI H  LH
Sbjct: 75  ENPGCFDGLEEDPAAFHPDTGELMLGDIVISLDKAKEQAKAYGHSLEREYAFLIAHSMLH 134

Query: 137 LLGYDHVDDKDACVMEGLERSILE 160
           L GYDH++D++  VME  +  IL+
Sbjct: 135 LFGYDHMEDEERAVMEEKQEEILQ 158


>gi|56417248|ref|YP_154322.1| hypothetical protein AM1264 [Anaplasma marginale str. St. Maries]
 gi|222475612|ref|YP_002564029.1| hypothetical protein AMF_953 [Anaplasma marginale str. Florida]
 gi|255003605|ref|ZP_05278569.1| hypothetical protein AmarPR_05268 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004734|ref|ZP_05279535.1| hypothetical protein AmarV_05648 [Anaplasma marginale str.
           Virginia]
 gi|62901414|sp|Q5P9G3|RRMF_ANAMM RecName: Full=Probable rRNA maturation factor
 gi|254807282|sp|B9KH69|RRMF_ANAMF RecName: Full=Probable rRNA maturation factor
 gi|56388480|gb|AAV87067.1| hypothetical protein AM1264 [Anaplasma marginale str. St. Maries]
 gi|222419750|gb|ACM49773.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 154

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 4/99 (4%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRGI K TNVLSF     S   C    LG+I L+ E I  E+  +     +H  H+
Sbjct: 55  LNSQYRGIHKATNVLSFSYEKLSPGCC----LGEIYLSMERIAEESLEMDVAVRSHFFHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +IHG LH+LGYDH + ++A  M+ LE  +L  LGI +PY
Sbjct: 111 LIHGMLHILGYDHEEPEEAITMQALEVGLLAKLGIRNPY 149


>gi|148284177|ref|YP_001248267.1| putative metalloprotease [Orientia tsutsugamushi str. Boryong]
 gi|146739616|emb|CAM79399.1| putative metal-dependent hydrolase [Orientia tsutsugamushi str.
           Boryong]
          Length = 167

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 11/160 (6%)

Query: 18  ENALWGD--EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           ++ +W +  EI+L  + +++      N+ +K   V++   E+ ++ T+ H ++ LNF +R
Sbjct: 10  QHPIWNNHNEINLCYVKKIIKTTLCHNVFAKLQLVQQ--AEVVILLTNDHEMQNLNFTHR 67

Query: 76  GIDKPTNVLSFPTAFASSDGCSSL-------MLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            I+KPTNVLSFP         S+L        LGDI   Y  I  EA    K F NH  H
Sbjct: 68  KINKPTNVLSFPDQVLDWQNLSTLDIQDNYIYLGDIAFGYNSISKEAVEQQKTFINHFTH 127

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L+IH  LHLLG+DH  D +A +ME LE ++L    I  PY
Sbjct: 128 LLIHAILHLLGFDHQHDSEAIIMEELEVNLLAKFSIASPY 167


>gi|186475179|ref|YP_001856649.1| hypothetical protein Bphy_0410 [Burkholderia phymatum STM815]
 gi|238689444|sp|B2JD86|RRMF_BURP8 RecName: Full=Probable rRNA maturation factor
 gi|184191638|gb|ACC69603.1| protein of unknown function UPF0054 [Burkholderia phymatum STM815]
          Length = 153

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 4/115 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            EL++ F D+    TLN  YRG D  TNVL+F  A+A S+     + GD++L   ++E E
Sbjct: 43  AELTVRFVDADEGRTLNRTYRGKDYATNVLTF--AYAESE--DDPVTGDLILCCPVVEKE 98

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           AN  GK    H  HL++HG LH  GYDH D+ +A  ME +E  +L  LG  DPYE
Sbjct: 99  ANEQGKPLGAHYAHLLVHGTLHAQGYDHEDEDEAEEMEAIETEVLGKLGFPDPYE 153


>gi|329113344|ref|ZP_08242125.1| Putative metalloprotease [Acetobacter pomorum DM001]
 gi|326697169|gb|EGE48829.1| Putative metalloprotease [Acetobacter pomorum DM001]
          Length = 179

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 7/112 (6%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
           ++V      +  LN  +RG  +PTNVL+F       +    +  GDI+LA E +  EA  
Sbjct: 72  TVVLATDREVRELNGRHRGKQRPTNVLTF-------EPPPGINGGDIILALETVVREARK 124

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            GK   +HL HL+IHG LHL GYDH    +A  ME LE  +L  L + +P++
Sbjct: 125 AGKPVADHLAHLVIHGSLHLAGYDHHHPGEAREMEMLESRLLSRLRVPNPWK 176


>gi|58040435|ref|YP_192399.1| hypothetical protein GOX2007 [Gluconobacter oxydans 621H]
 gi|62901405|sp|Q5FPF3|RRMF_GLUOX RecName: Full=Probable rRNA maturation factor
 gi|58002849|gb|AAW61743.1| Hypothetical protein GOX2007 [Gluconobacter oxydans 621H]
          Length = 168

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +E+A W   +      E    +A+  +  +G          S++      ++ LN  +
Sbjct: 12  IIIEDARWRASV---PGTERAIRRALVAVARQGGPDFTQSPAPSILLATDRIVKRLNARF 68

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R  +KPTNVL+F       +  S +  GDIVL YE +  EA    +    HL HL++HG 
Sbjct: 69  RDKNKPTNVLTF-------EPLSPMHGGDIVLGYETVRREAAAARRSLRAHLSHLVVHGA 121

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           LHL GYDH    +A  MEG+E   L  LG  DP+ 
Sbjct: 122 LHLAGYDHHHPGEAREMEGIETRTLRSLGFGDPWR 156


>gi|254482458|ref|ZP_05095697.1| conserved hypothetical protein TIGR00043, putative [marine gamma
           proteobacterium HTCC2148]
 gi|214037149|gb|EEB77817.1| conserved hypothetical protein TIGR00043, putative [marine gamma
           proteobacterium HTCC2148]
          Length = 159

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 2/115 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+S+   D   +  LN  YR    PTNVLSFP+           +LGDIV+   ++  E
Sbjct: 37  TEISVRLVDIEEMTKLNQGYRDKSGPTNVLSFPSDLPPEL--DLPLLGDIVICAPVVCDE 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           A    K  + H  H+ +HG LHLLGYDH+++ +A  ME LE  IL  L    PY+
Sbjct: 95  AKSQQKILQAHWAHMTVHGTLHLLGYDHIEEDEALAMEALETEILTSLNYPCPYQ 149


>gi|167035831|ref|YP_001671062.1| putative metalloprotease [Pseudomonas putida GB-1]
 gi|189040216|sp|B0KJW3|RRMF_PSEPG RecName: Full=Probable rRNA maturation factor
 gi|166862319|gb|ABZ00727.1| protein of unknown function UPF0054 [Pseudomonas putida GB-1]
          Length = 157

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 77/144 (53%), Gaps = 13/144 (9%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
            R  CE+   +  ++             E+++   D      LN  YR  D  TNVLSFP
Sbjct: 20  FRRWCELALRQRTAD------------SEMTIRLVDEAEGRELNHTYRHKDYATNVLSFP 67

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
            A    D     +LGD+V+   ++E EA   GK  E H  HL++HG LHLLGYDH++D++
Sbjct: 68  -ADVPDDLLDIPLLGDLVICVAVVEREAAEQGKSLEAHWAHLVMHGCLHLLGYDHIEDEE 126

Query: 148 ACVMEGLERSILEDLGINDPYEVD 171
           A  MEGLER +L +LG  DPY  D
Sbjct: 127 AEEMEGLERELLAELGHPDPYADD 150


>gi|258542172|ref|YP_003187605.1| hypothetical protein APA01_10760 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633250|dbj|BAH99225.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256636309|dbj|BAI02278.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256639362|dbj|BAI05324.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256642418|dbj|BAI08373.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645473|dbj|BAI11421.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648526|dbj|BAI14467.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651579|dbj|BAI17513.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654570|dbj|BAI20497.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 168

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 7/112 (6%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
           ++V      +  LN  +RG  +PTNVL+F       +    +  GDI+LA E +  EA  
Sbjct: 61  TVVLATDREVRELNGRHRGKHRPTNVLTF-------EPPPGITGGDIILALETVVREARK 113

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            GK   +HL HL+IHG LHL GYDH    +A  ME LE  +L  L + +P++
Sbjct: 114 AGKPVADHLAHLVIHGSLHLAGYDHHHPGEAREMEMLESRLLSRLRVPNPWK 165


>gi|306819834|ref|ZP_07453488.1| possible metal-dependent hydrolase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304552081|gb|EFM40018.1| possible metal-dependent hydrolase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 158

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 61/116 (52%), Gaps = 7/116 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           E+SL FTD+  I  +N EYR ID  T+VLSFP            S   +   LGDIV++ 
Sbjct: 41  EISLTFTDNENIRQINKEYRDIDDKTDVLSFPMYEIEDLEEEKKSKSKNLKPLGDIVISM 100

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E  + +A   G  FE  + +LI H   HL+GYDH+ D +  +M   E  I+  L I
Sbjct: 101 EQADEQAKQFGHSFEREVCYLICHSMFHLMGYDHMTDDEKKIMREKEEKIMTKLNI 156


>gi|297539315|ref|YP_003675084.1| hypothetical protein M301_2139 [Methylotenera sp. 301]
 gi|297258662|gb|ADI30507.1| protein of unknown function UPF0054 [Methylotenera sp. 301]
          Length = 145

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 70/141 (49%), Gaps = 12/141 (8%)

Query: 34  VVFAKAVSNLISKGYF---VKENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           V +A  +++L S+  F    K  I    E ++   D      LN  YRG D  TNVL+FP
Sbjct: 8   VQYASTLNDLPSRSQFRLWAKAAIRVDTEAAIRIVDEAEGRELNKAYRGKDYATNVLTFP 67

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                       ++GDI++   ++  EA    K  E H  HL +HG LHL GYDH  +  
Sbjct: 68  LTEEPH------LMGDIIICAPVVAAEALAQNKPLEAHYAHLTVHGILHLHGYDHEVEAQ 121

Query: 148 ACVMEGLERSILEDLGINDPY 168
           A +ME LE +I+  LG  +PY
Sbjct: 122 AELMESLETAIITKLGYANPY 142


>gi|323342100|ref|ZP_08082333.1| metal-dependent hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464525|gb|EFY09718.1| metal-dependent hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 147

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 3/115 (2%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           +N VE+++V  D   I   N E+R ID+PT+VLSF     S +G    M+GDI+++ + I
Sbjct: 35  KNPVEVNVVLVDDPSIHNFNKEFRDIDRPTDVLSFEDG--SMEG-EVFMMGDIIISVDAI 91

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
             +A   G   +     L+ HG+LHLLGYDH   ++  VM GL++ IL D+   D
Sbjct: 92  RRQAEEYGHSIKREFCFLVAHGYLHLLGYDHHTPEEEVVMFGLQKEILHDIARKD 146


>gi|238019234|ref|ZP_04599660.1| hypothetical protein VEIDISOL_01098 [Veillonella dispar ATCC 17748]
 gi|237863933|gb|EEP65223.1| hypothetical protein VEIDISOL_01098 [Veillonella dispar ATCC 17748]
          Length = 158

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 9/131 (6%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           + V + +S+ Y ++E+  E+S++  D+ +I  LN EYRGID+PT+VLSF  A    D   
Sbjct: 22  RKVCDEVSRVYGLEED--EMSILLCDNAKIHELNKEYRGIDRPTDVLSF--ALNEGDDYE 77

Query: 98  SL-----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M 
Sbjct: 78  GSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEMR 137

Query: 153 GLERSILEDLG 163
             E  IL +LG
Sbjct: 138 TEEEFILGNLG 148


>gi|68171524|ref|ZP_00544904.1| Protein of unknown function UPF0054 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658303|ref|YP_507939.1| hypothetical protein ECH_1155 [Ehrlichia chaffeensis str. Arkansas]
 gi|123492551|sp|Q2GF44|RRMF_EHRCR RecName: Full=Probable rRNA maturation factor
 gi|67999052|gb|EAM85723.1| Protein of unknown function UPF0054 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599760|gb|ABD45229.1| conserved hypothetical protein TIGR00043 [Ehrlichia chaffeensis
           str. Arkansas]
          Length = 154

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 4/112 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+V  ++  ++ LN+EYR  +KPTNVLSFP     +  C    LG+I ++ + +  E+ 
Sbjct: 42  ISVVLANNRLLQKLNYEYRKKNKPTNVLSFPYN-KLNKYC---YLGEIFVSLDTLINEST 97

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            L    E+H  H++IHG LH+L Y+H +  +  +ME +E  +L+ LGI +PY
Sbjct: 98  DLNIPIEHHTSHMLIHGLLHILDYNHEEPLEQYIMESIEIKLLDKLGIKNPY 149


>gi|313893245|ref|ZP_07826820.1| translation metalloprotein YbeY [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313442141|gb|EFR60558.1| translation metalloprotein YbeY [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 158

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 9/131 (6%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           + V + +S+ Y ++E+  E+S++  D+ +I  LN EYRGID+PT+VLSF  A    D   
Sbjct: 22  RKVCDEVSRVYGLEED--EMSILLCDNAKIHELNKEYRGIDRPTDVLSF--ALNEGDDYE 77

Query: 98  SL-----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M 
Sbjct: 78  GSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEMR 137

Query: 153 GLERSILEDLG 163
             E  IL +LG
Sbjct: 138 TEEEFILGNLG 148


>gi|296112099|ref|YP_003622481.1| hypothetical protein LKI_09865 [Leuconostoc kimchii IMSNU 11154]
 gi|295833631|gb|ADG41512.1| hypothetical protein LKI_09865 [Leuconostoc kimchii IMSNU 11154]
          Length = 160

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 16/132 (12%)

Query: 47  GYFVK-ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------------PTAFASS 93
           G F+K  +  E+S+ F ++  I+  N +YRG+DKPT+V+SF            P    ++
Sbjct: 29  GTFLKLPDNTEMSVTFVNNDEIQQYNRQYRGVDKPTDVISFAIEEGEDDFDILPDQEWAN 88

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVME 152
           D   ++  GDI+++ ++I  +A  LG  +E  L  L++HGFLHL GYDH+  D +   M 
Sbjct: 89  DIAKNI--GDILVSVDVIASQATYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMF 146

Query: 153 GLERSILEDLGI 164
            L+R IL+D G+
Sbjct: 147 DLQRKILDDYGL 158


>gi|209517502|ref|ZP_03266342.1| protein of unknown function UPF0054 [Burkholderia sp. H160]
 gi|209502035|gb|EEA02051.1| protein of unknown function UPF0054 [Burkholderia sp. H160]
          Length = 153

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 4/114 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++ F D+    TLN  YRG D  TNVL+F  A+A S+     + GD++L   ++E EA
Sbjct: 44  ELTIRFVDAEEGRTLNRTYRGKDYATNVLTF--AYAESE--DDPVTGDLILCCPVVEQEA 99

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              GK    H  HL++HG LH  GYDH  +++A  ME LE  IL+ LG  DPY+
Sbjct: 100 AEQGKPLAAHYAHLLVHGTLHAQGYDHEVEEEAEEMEALETEILDKLGFPDPYQ 153


>gi|238924118|ref|YP_002937634.1| hypothetical protein EUBREC_1756 [Eubacterium rectale ATCC 33656]
 gi|259646480|sp|C4ZA59|RRMF_EUBR3 RecName: Full=Probable rRNA maturation factor
 gi|238875793|gb|ACR75500.1| hypothetical protein EUBREC_1756 [Eubacterium rectale ATCC 33656]
          Length = 165

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++L  TD+  I  +N EYR ID+PT+VLSFP     + G                   
Sbjct: 38  AEVNLTLTDNEGIHAINKEYRQIDRPTDVLSFPMLSYETPGDFSFLSDENEDDFNPDTGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           +MLGDI+++ + ++ +A   G   +     LI H  LHL GYDH++  +A VME  +R I
Sbjct: 98  VMLGDIIISVDKVKEQAVEYGHSEKREFAFLITHSMLHLFGYDHMEADEAAVMEEHQRKI 157

Query: 159 LEDLGI 164
           L+ LGI
Sbjct: 158 LDALGI 163


>gi|296504797|ref|YP_003666497.1| putative metalloprotease [Bacillus thuringiensis BMB171]
 gi|296325849|gb|ADH08777.1| putative metalloprotease [Bacillus thuringiensis BMB171]
          Length = 156

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 13/147 (8%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E ++  +CEV+   A    I  G        E+S+ F D+ RI  +N +YR  D+PT+V+
Sbjct: 16  EEYMSLICEVLEKAAQMENIEDG-------AEVSVTFVDNERIREINRDYRDKDQPTDVI 68

Query: 85  SFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           SF                   MLGD++++    + +A   G  F+  L  L +HGFLHLL
Sbjct: 69  SFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLL 128

Query: 139 GYDHVDDKDACVMEGLERSILEDLGIN 165
           GYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 129 GYDHMTEEDEKEMFGRQKEILEAFGLG 155


>gi|150015729|ref|YP_001307983.1| metalloprotease [Clostridium beijerinckii NCIMB 8052]
 gi|189040615|sp|A6LRP7|RRMF_CLOB8 RecName: Full=Probable rRNA maturation factor
 gi|149902194|gb|ABR33027.1| protein of unknown function UPF0054 [Clostridium beijerinckii NCIMB
           8052]
          Length = 167

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 17/126 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GCSS 98
           E+SL+F D++ I+ +N E RGI++ T+VLSFP                  F+ SD     
Sbjct: 39  EISLLFVDNNEIKEINNETRGINRETDVLSFPMLEYEDKKVFKDMYKDYKFSQSDFDGDE 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIVL+ E    ++      +E    +L++H  LHLLGYDH++D D  +M   E  I
Sbjct: 99  LVLGDIVLSLEKALEQSKEFNHSYEREASYLVVHSVLHLLGYDHMEDDDKIIMRSREEDI 158

Query: 159 LEDLGI 164
           L  L I
Sbjct: 159 LNKLNI 164


>gi|311108331|ref|YP_003981184.1| metalloprotein, YbeY family protein [Achromobacter xylosoxidans A8]
 gi|310763020|gb|ADP18469.1| metalloprotein, YbeY family protein [Achromobacter xylosoxidans A8]
          Length = 157

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 61/121 (50%), Gaps = 14/121 (11%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----PTAFASSDGCSSLMLGDIVLA 107
           +  ELSL    +     LN ++RG D  TNVL+F     P   A          GDIV+ 
Sbjct: 43  SAAELSLRLVGAAEGRRLNRDFRGRDYATNVLTFEYGVDPLGVAR---------GDIVMC 93

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
             ++  EA    K   +H  HL IHG LH LGYDH+  +DA  ME LE + L D+ I DP
Sbjct: 94  VPVLVREAREQRKALLDHAAHLTIHGVLHALGYDHIKARDAKRMEALETATLADMRIADP 153

Query: 168 Y 168
           Y
Sbjct: 154 Y 154


>gi|300088389|ref|YP_003758911.1| hypothetical protein Dehly_1299 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299528122|gb|ADJ26590.1| protein of unknown function UPF0054 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 161

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 12/120 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------------SLMLGD 103
           E+ +  T   ++  LN  YRG DKPT+VLSF      + G +            SL LG+
Sbjct: 38  EMGIYITGQEKMRELNRVYRGKDKPTDVLSFSFYVKEASGSAETDVEFPVPEDGSLHLGE 97

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +V++    E++A  LG   +  L  L+IHG +HLLG+DH  D DA +ME  E  IL+ L 
Sbjct: 98  LVISLPQAELQAAELGHSVKTELARLLIHGVMHLLGFDHEKDADAEIMEARELEILKQLA 157


>gi|238028584|ref|YP_002912815.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           glumae BGR1]
 gi|237877778|gb|ACR30111.1| Hypothetical protein bglu_1g30480 [Burkholderia glumae BGR1]
          Length = 272

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 10/150 (6%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           +GDEI       +   K ++  +S          +L++ F        LN  YR  D PT
Sbjct: 131 YGDEITTAQRKTLPKRKLIAEWLSTSLSAD---AQLTVRFVGEQEGRELNRGYRKKDYPT 187

Query: 82  NVLSFPTAF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           NVL+F  A+ A+ DG +   +GD+V+   ++E EA    K    H  HL++HG LH  GY
Sbjct: 188 NVLTF--AYDAAPDGTT---IGDLVICCPVVEKEAAEQDKPLLAHYAHLLVHGALHAQGY 242

Query: 141 DH-VDDKDACVMEGLERSILEDLGINDPYE 169
           DH   ++DA  ME LE  IL  LG  +PY+
Sbjct: 243 DHERSEEDAAEMEALETDILAKLGFPNPYQ 272


>gi|57239608|ref|YP_180744.1| hypothetical protein Erum8820 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579597|ref|YP_197809.1| hypothetical protein ERWE_CDS_09330 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|62901161|sp|Q5HA01|RRMF_EHRRW RecName: Full=Probable rRNA maturation factor
 gi|57161687|emb|CAH58617.1| conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418223|emb|CAI27427.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 157

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 8/136 (5%)

Query: 35  VFAKAV--SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +F K V  S+LI+   +  + I+  S+V  ++  ++ LN+EYR  +KPTNVLSFP     
Sbjct: 20  IFVKNVIKSSLINLNIYEYKPII--SIVLANNILLQKLNYEYRNKNKPTNVLSFPYD-KL 76

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           +  C+   LG+I L+ + +  E+  L    E+H  H++IHG LH+L Y+H +     +ME
Sbjct: 77  NKKCN---LGEIFLSLDTLIQESIDLNIPIEHHTCHMLIHGLLHILDYNHEEPLMQYIME 133

Query: 153 GLERSILEDLGINDPY 168
            +E  +L+ LGI +PY
Sbjct: 134 SIEIKLLDKLGIRNPY 149


>gi|218288622|ref|ZP_03492899.1| protein of unknown function UPF0054 [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241279|gb|EED08454.1| protein of unknown function UPF0054 [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 157

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 13/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+   VE  L       +   E V   A   +  +G        E+S++F +   I  L
Sbjct: 6   IDVTCEVEWPLTPPHGDAQAFVERVLEAAAERIGVRG--------EVSVLFVNDDAIHEL 57

Query: 71  NFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           N  YR +D+PT+VLSFP       A  D     MLGDIV++ +    +A   G   E  +
Sbjct: 58  NRTYRQVDRPTDVLSFPMNEGEELADPDEVDP-MLGDIVVSVDRAREQAEAYGHSLEREV 116

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L++HGFLHL GYDH D+     M GL+  IL+ +G++
Sbjct: 117 AFLLVHGFLHLNGYDHEDEAGEREMFGLQEEILQGIGLS 155


>gi|170025228|ref|YP_001721733.1| putative metalloprotease [Yersinia pseudotuberculosis YPIII]
 gi|238688388|sp|B1JG97|RRMF_YERPY RecName: Full=Probable rRNA maturation factor
 gi|169751762|gb|ACA69280.1| protein of unknown function UPF0054 [Yersinia pseudotuberculosis
           YPIII]
          Length = 157

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++
Sbjct: 36  QPVSEVTIRLVDEAESHDLNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVV 93

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E EA    K    H  H+++HG LHLLGYDH+DD +A  ME +E  I+  LG  DPY
Sbjct: 94  EKEAIEQEKALLAHWAHMVVHGSLHLLGYDHIDDDEAEEMELIEIEIMHGLGYPDPY 150


>gi|291524855|emb|CBK90442.1| conserved hypothetical protein TIGR00043 [Eubacterium rectale DSM
           17629]
 gi|291528996|emb|CBK94582.1| conserved hypothetical protein TIGR00043 [Eubacterium rectale
           M104/1]
          Length = 165

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++L  TD+  I  +N EYR ID+PT+VLSFP     + G                   
Sbjct: 38  AEVNLTLTDNEGIHAINKEYRQIDRPTDVLSFPMLSYETPGDFSFISDENEDDFNPDTGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           +MLGDI+++ + ++ +A   G   +     LI H  LHL GYDH++  +A VME  +R I
Sbjct: 98  VMLGDIIISVDKVKEQALEYGHSEKREFAFLITHSMLHLFGYDHMEADEAAVMEEHQRKI 157

Query: 159 LEDLGI 164
           L+ LGI
Sbjct: 158 LDALGI 163


>gi|163857969|ref|YP_001632267.1| putative metalloprotease [Bordetella petrii DSM 12804]
 gi|226701660|sp|A9I000|RRMF_BORPD RecName: Full=Probable rRNA maturation factor
 gi|163261697|emb|CAP43999.1| conserved hypothetical protein [Bordetella petrii]
          Length = 155

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 4/114 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELSL          LN  YR  D  TNVL+F      +D   +   GDIV+   ++  E
Sbjct: 45  AELSLRLVGQAEGRRLNHAYRERDYATNVLTFEY---GTDPLGTAR-GDIVICVPVLARE 100

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK   +H  HL +HG LH LGYDH+  +DA  ME LE +IL  + I DPY
Sbjct: 101 AREQGKTLLDHAAHLTVHGVLHALGYDHIKARDARRMEALETAILTGMRIADPY 154


>gi|330718563|ref|ZP_08313163.1| metal-dependent hydrolase [Leuconostoc fallax KCTC 3537]
          Length = 160

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 12/130 (9%)

Query: 47  GYFVK-ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCS 97
           G+++K     E+S+ F ++  I   N +YRG+DKPT+V+SF               +   
Sbjct: 29  GHYLKLPEDTEMSVTFMNNDAIHEYNKQYRGVDKPTDVISFAIEEDGDDLPVLPDEEMAE 88

Query: 98  SLM--LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD-KDACVMEGL 154
           +L   +GDI+++ +I++ +A+ LG  FE  L  L++HGFLHL GYDH+D+      M  L
Sbjct: 89  TLAKNIGDILVSIDIVDTQADYLGHSFERELGFLVVHGFLHLNGYDHMDEGPQEKEMFEL 148

Query: 155 ERSILEDLGI 164
           +R IL+D G+
Sbjct: 149 QRKILDDYGL 158


>gi|229163248|ref|ZP_04291203.1| metalloprotease [Bacillus cereus R309803]
 gi|228620311|gb|EEK77182.1| metalloprotease [Bacillus cereus R309803]
          Length = 143

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 142


>gi|229031951|ref|ZP_04187938.1| metalloprotease [Bacillus cereus AH1271]
 gi|229174977|ref|ZP_04302497.1| metalloprotease [Bacillus cereus MM3]
 gi|228608645|gb|EEK65947.1| metalloprotease [Bacillus cereus MM3]
 gi|228729415|gb|EEL80405.1| metalloprotease [Bacillus cereus AH1271]
          Length = 143

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 23  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 142


>gi|332975865|gb|EGK12743.1| metal-dependent hydrolase [Desmospora sp. 8437]
          Length = 157

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 6/116 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----AFASSDGCSSLMLGDIVLAYE 109
            E+++   D   I  LN EYR +D+PT+VLSFP       + S +G   L LGDIV++  
Sbjct: 40  AEVAVTIVDDEEIHRLNREYRQVDRPTDVLSFPQWEPGEEWGSPEG-EPLPLGDIVISLP 98

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
               +A   G   E  L  L +HGFLHLLGYDH  D++   M   + +IL  +G+ 
Sbjct: 99  RAREQAAQYGHSLERELGFLAVHGFLHLLGYDHGTDEEEEEMFSRQEAILSRVGLT 154


>gi|228916935|ref|ZP_04080497.1| metalloprotease [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228842759|gb|EEM87845.1| metalloprotease [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 143

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKGILEAFGLG 142


>gi|303231491|ref|ZP_07318221.1| translation metalloprotein YbeY [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513834|gb|EFL55846.1| translation metalloprotein YbeY [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 158

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 12/139 (8%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           + V + +S+ Y ++ +  ELS++  D+ +I  LN EYRGID+PT+VLSF  A    D   
Sbjct: 22  QKVCDEVSRVYGLEND--ELSILLCDNKKIHELNKEYRGIDRPTDVLSF--ALNEGDDYE 77

Query: 98  SL-----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGD++L+ E    +A   G  FE  L +L  H  LH+LGYDH+ D+D   M 
Sbjct: 78  GSEEEHHLLGDMILSLERAHEQAVEYGHSFERELAYLTTHSCLHILGYDHMTDEDKKEMR 137

Query: 153 GLERSILEDLGI---NDPY 168
             E  +L +LG    + PY
Sbjct: 138 TEEEFVLSNLGYVREDQPY 156


>gi|294341620|emb|CAZ90037.1| putative metal-dependent hydrolase [Thiomonas sp. 3As]
          Length = 175

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           V  +++  L   G   + + + L  V  D  R   LN  YRG D PTNVL+F       D
Sbjct: 42  VGPESLDALPQAGALSEAHQITLRFVAADEGR--ALNRAYRGKDYPTNVLTF-------D 92

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                +  DIVL   ++  EA    K    H  HL+IHG LH  G+DH  +++A  ME  
Sbjct: 93  YNHWPVQADIVLCCPVVAGEALAQHKPLGAHYAHLVIHGLLHAQGWDHQTEREAQKMERQ 152

Query: 155 ERSILEDLGINDPY 168
           E ++L+  GI+DPY
Sbjct: 153 EVTVLQRFGISDPY 166


>gi|331001260|ref|ZP_08324886.1| translation metalloprotein YbeY [Parasutterella excrementihominis
           YIT 11859]
 gi|329568987|gb|EGG50783.1| translation metalloprotein YbeY [Parasutterella excrementihominis
           YIT 11859]
          Length = 156

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           EN  ++++ F +      LN  YR  D  TNVL+F            ++  D+V+   ++
Sbjct: 35  ENDAQITVRFVEEEEGRELNKTYRSKDYATNVLTFDYQI------EPVVEADLVICVPVL 88

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E E+    K  E H+ HL++HG LH  GYDH+DD++A VME  E  +L DLG + PY
Sbjct: 89  EKESKDQNKTLEEHMAHLLVHGTLHAQGYDHMDDEEAEVMEQRETDVLVDLGFDVPY 145


>gi|303256204|ref|ZP_07342220.1| putative metalloprotease [Burkholderiales bacterium 1_1_47]
 gi|302860933|gb|EFL84008.1| putative metalloprotease [Burkholderiales bacterium 1_1_47]
          Length = 156

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           EN  ++++ F +      LN  YR  D  TNVL+F            ++  D+V+   ++
Sbjct: 35  ENDAQITVRFVEEEEGRELNKTYRSKDYATNVLTFDYQI------EPVVEADLVICVPVL 88

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E E+    K  E H+ HL++HG LH  GYDH+DD++A VME  E  +L DLG + PY
Sbjct: 89  EKESKDQNKTLEEHMAHLLVHGTLHAQGYDHMDDEEAEVMEQRETDVLVDLGFDVPY 145


>gi|228929346|ref|ZP_04092371.1| metalloprotease [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228935623|ref|ZP_04098438.1| metalloprotease [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228948016|ref|ZP_04110302.1| metalloprotease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228987553|ref|ZP_04147672.1| metalloprotease [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|229093372|ref|ZP_04224479.1| metalloprotease [Bacillus cereus Rock3-42]
 gi|229123841|ref|ZP_04253035.1| metalloprotease [Bacillus cereus 95/8201]
 gi|229141040|ref|ZP_04269583.1| metalloprotease [Bacillus cereus BDRD-ST26]
 gi|229157917|ref|ZP_04285991.1| metalloprotease [Bacillus cereus ATCC 4342]
 gi|229186542|ref|ZP_04313704.1| metalloprotease [Bacillus cereus BGSC 6E1]
 gi|229198429|ref|ZP_04325135.1| metalloprotease [Bacillus cereus m1293]
 gi|228585129|gb|EEK43241.1| metalloprotease [Bacillus cereus m1293]
 gi|228596973|gb|EEK54631.1| metalloprotease [Bacillus cereus BGSC 6E1]
 gi|228625576|gb|EEK82329.1| metalloprotease [Bacillus cereus ATCC 4342]
 gi|228642473|gb|EEK98761.1| metalloprotease [Bacillus cereus BDRD-ST26]
 gi|228659662|gb|EEL15308.1| metalloprotease [Bacillus cereus 95/8201]
 gi|228690028|gb|EEL43829.1| metalloprotease [Bacillus cereus Rock3-42]
 gi|228772285|gb|EEM20732.1| metalloprotease [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|228811706|gb|EEM58041.1| metalloprotease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228824063|gb|EEM69880.1| metalloprotease [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228830360|gb|EEM75972.1| metalloprotease [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
          Length = 143

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 142


>gi|82703810|ref|YP_413376.1| hypothetical protein Nmul_A2697 [Nitrosospira multiformis ATCC
           25196]
 gi|123543797|sp|Q2Y5I7|RRMF_NITMU RecName: Full=Probable rRNA maturation factor
 gi|82411875|gb|ABB75984.1| Protein of unknown function UPF0054 [Nitrosospira multiformis ATCC
           25196]
          Length = 189

 Score = 80.9 bits (198), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------PTAFASSDGCSSLMLGDIVL 106
            E++L   D      LN ++R  D  TNVL+F        P +       +  + GDIVL
Sbjct: 56  AEIALRIVDEEEGHRLNRDFRNKDYATNVLTFVYRDGQIHPDSPLGEKRGAYPLTGDIVL 115

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
              ++E EA    K+   H  HL +HG LHL GYDH +D+DA  ME  E  IL  LG  D
Sbjct: 116 CAPVVENEAGQQQKDLMAHYAHLTVHGVLHLQGYDHQEDEDAKNMEETETRILAWLGYED 175

Query: 167 PY 168
           PY
Sbjct: 176 PY 177


>gi|260890435|ref|ZP_05901698.1| putative metalloprotease [Leptotrichia hofstadii F0254]
 gi|260860055|gb|EEX74555.1| putative metalloprotease [Leptotrichia hofstadii F0254]
          Length = 157

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 3/104 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEA 115
           LSL+ T + +I+ +N EYR  D PT+V+SF  A+  ++   ++ MLGDIV++ E ++ ++
Sbjct: 49  LSLLITTNAQIQEINHEYRQKDTPTDVISF--AYNETENFGAMNMLGDIVISIERVKEQS 106

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +  G   E    +++ HG LHLLGYDH+++KD  VM   E  IL
Sbjct: 107 SEYGHSDEREFYYVLCHGMLHLLGYDHIEEKDKVVMRRREEEIL 150


>gi|228923055|ref|ZP_04086348.1| metalloprotease [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228836688|gb|EEM82036.1| metalloprotease [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 154

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+ VE+S+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 34  EDGVEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 153


>gi|88811724|ref|ZP_01126978.1| hypothetical protein NB231_04945 [Nitrococcus mobilis Nb-231]
 gi|88791115|gb|EAR22228.1| hypothetical protein NB231_04945 [Nitrococcus mobilis Nb-231]
          Length = 154

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 2/113 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D      LN  YRG D  TN+L+FP      +G  +++LGD+V+   ++  EA
Sbjct: 37  EIAIRIVDEEEGRELNAIYRGYDYATNILAFPAEL--PEGVEAVLLGDLVICAPLVAREA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +   K    H  HL++HG LHLLGYDH ++  A VME  ER IL  LG  DPY
Sbjct: 95  DEQDKRLAAHWAHLVVHGVLHLLGYDHEEEAAAAVMEAQERVILAKLGYPDPY 147


>gi|229543817|ref|ZP_04432876.1| protein of unknown function UPF0054 [Bacillus coagulans 36D1]
 gi|229324956|gb|EEN90632.1| protein of unknown function UPF0054 [Bacillus coagulans 36D1]
          Length = 156

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLMLGDIV 105
           E+  ELS+ FTD+  I  +N +YRG D+PT+V+SF            +      +LGDI+
Sbjct: 36  EDGTELSVTFTDNEGIREINRDYRGKDQPTDVISFALEEMGEGEIEITGAEIPRVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++      +A   G  FE  L  L +HGFLHLLGYDH+  +D   M G +  IL+  G+ 
Sbjct: 96  ISVPRAREQAEEYGHSFERELGFLAVHGFLHLLGYDHMTKEDETEMFGRQNEILDRYGLK 155


>gi|33600341|ref|NP_887901.1| putative metalloprotease [Bordetella bronchiseptica RB50]
 gi|46577415|sp|Q7WMN5|RRMF_BORBR RecName: Full=Probable rRNA maturation factor
 gi|145559541|sp|Q7VZ88|RRMF_BORPE RecName: Full=Probable rRNA maturation factor
 gi|33567940|emb|CAE31853.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 157

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL L          LN E+RG D  TNVL+F        G   +  GDIV+   ++  EA
Sbjct: 46  ELGLRLVGLAEGRRLNREFRGRDYATNVLTFE----YGTGPDGVARGDIVVCVPVLAREA 101

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  HL +HG LH LGYDH+   +A  ME LE ++L  +GI DPY
Sbjct: 102 REQRKTLLDHAAHLTVHGTLHALGYDHIKAGEARRMEALETAVLARMGIADPY 154


>gi|42783429|ref|NP_980676.1| putative metalloprotease [Bacillus cereus ATCC 10987]
 gi|59799126|sp|Q730N3|RRMF_BACC1 RecName: Full=Probable rRNA maturation factor
 gi|42739358|gb|AAS43284.1| conserved hypothetical protein TIGR00043 [Bacillus cereus ATCC
           10987]
          Length = 156

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 36  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 155


>gi|152976733|ref|YP_001376250.1| putative metalloprotease [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189039807|sp|A7GSZ7|RRMF_BACCN RecName: Full=Probable rRNA maturation factor
 gi|152025485|gb|ABS23255.1| protein of unknown function UPF0054 [Bacillus cytotoxicus NVH
           391-98]
          Length = 156

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           E+  ELS+ F D+ RI  +N +YRG D+PT+V+SF            +      MLGD++
Sbjct: 36  EDGTELSVTFVDNERIREINRDYRGKDQPTDVISFALEDMGEGEVEIIGADMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ IL   G+ 
Sbjct: 96  ISIPRTKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGKQKEILGAFGLR 155


>gi|282850279|ref|ZP_06259658.1| metalloprotein, YbeY/ UPF0054 family [Veillonella parvula ATCC
           17745]
 gi|282579772|gb|EFB85176.1| metalloprotein, YbeY/ UPF0054 family [Veillonella parvula ATCC
           17745]
          Length = 158

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 9/131 (6%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           + V + +S+ Y ++E+  E+S++  D+ +I  LN EYRGID+PT+VLSF  A    D   
Sbjct: 22  RKVCDEVSRVYGLEED--EMSILLCDNAKIHKLNKEYRGIDRPTDVLSF--ALNEGDDYE 77

Query: 98  SL-----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M 
Sbjct: 78  GSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEMR 137

Query: 153 GLERSILEDLG 163
             E  IL +LG
Sbjct: 138 IEEEFILGNLG 148


>gi|331084774|ref|ZP_08333862.1| hypothetical protein HMPREF0987_00165 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410868|gb|EGG90290.1| hypothetical protein HMPREF0987_00165 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 164

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L E V A+AV       Y       E++L+ T +  I  +N E+R ID+ T+VLSFP 
Sbjct: 18  RKLAEKVIAEAVD------YEQCPYETEVNLLLTMNEEIREMNREFREIDRATDVLSFPM 71

Query: 89  AFASSDG---------------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
               + G                  LMLGDIV++ E +  +A   G   E     L+ H 
Sbjct: 72  VDYGTPGDFEFLEEDDSYFHPESGELMLGDIVISKEKVTAQAEEYGHTEEREFAFLVAHS 131

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHL GYDH+++ +  VME  +R ILE L I
Sbjct: 132 MLHLFGYDHMEEDERAVMEQKQREILERLNI 162


>gi|58617651|ref|YP_196850.1| hypothetical protein ERGA_CDS_09240 [Ehrlichia ruminantium str.
           Gardel]
 gi|62901147|sp|Q5FGP9|RRMF_EHRRG RecName: Full=Probable rRNA maturation factor
 gi|58417263|emb|CAI28376.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 157

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 8/136 (5%)

Query: 35  VFAKAV--SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +F K V  S+LI+   +  + I+  S+V  ++  ++ LN+EYR  +KPTNVLSFP     
Sbjct: 20  IFVKNVIKSSLINLNIYEYKPII--SIVLANNILLQKLNYEYRNKNKPTNVLSFPYD-KL 76

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           +  C+   LG+I L+ + +  E+  L    E+H  H++IHG LH+L Y+H +     +ME
Sbjct: 77  NKKCN---LGEIFLSLDTLIEESIDLNIPIEHHTCHMLIHGLLHILDYNHEEPLMQYIME 133

Query: 153 GLERSILEDLGINDPY 168
            +E  +L+ LGI +PY
Sbjct: 134 SIEIKLLDKLGIRNPY 149


>gi|33592182|ref|NP_879826.1| putative metalloprotease [Bordetella pertussis Tohama I]
 gi|33571827|emb|CAE41339.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332381599|gb|AEE66446.1| putative metalloprotease [Bordetella pertussis CS]
          Length = 149

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL L          LN E+RG D  TNVL+F        G   +  GDIV+   ++  EA
Sbjct: 38  ELGLRLVGLAEGRRLNREFRGRDYATNVLTFE----YGTGPDGVARGDIVVCVPVLAREA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  HL +HG LH LGYDH+   +A  ME LE ++L  +GI DPY
Sbjct: 94  REQRKTLLDHAAHLTVHGTLHALGYDHIKAGEARRMEALETAVLARMGIADPY 146


>gi|47567867|ref|ZP_00238575.1| conserved hypothetical protein protein TIGR00043 [Bacillus cereus
           G9241]
 gi|47555544|gb|EAL13887.1| conserved hypothetical protein protein TIGR00043 [Bacillus cereus
           G9241]
          Length = 156

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 155


>gi|291538974|emb|CBL12085.1| conserved hypothetical protein TIGR00043 [Roseburia intestinalis
           XB6B4]
          Length = 169

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++L  TD+  I  +N EYR ID PT+VLSFP     S G                   
Sbjct: 42  AEINLTLTDNDGIHAINKEYRDIDAPTDVLSFPMLSYESAGDFSKLEDNYDDNFNPDTGE 101

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           +MLGDI+++ + ++ +A   G   +     LI+H  LHL GYDH+  ++A +MEG +  I
Sbjct: 102 IMLGDIIISVDKVKEQAKSYGHSEKREYAFLILHSMLHLFGYDHMTPEEAAIMEGKQTEI 161

Query: 159 LEDLGI 164
           L ++ I
Sbjct: 162 LNEMNI 167


>gi|262377255|ref|ZP_06070479.1| metal-dependent hydrolase [Acinetobacter lwoffii SH145]
 gi|262307708|gb|EEY88847.1| metal-dependent hydrolase [Acinetobacter lwoffii SH145]
          Length = 160

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEI 113
           E+ +   D+     LN EYR  DKPTNVLSFP+      +    +  +GD+V+   ++  
Sbjct: 41  EIGIACVDNDESHKLNLEYRDKDKPTNVLSFPSELPDEMAQFLDAFPIGDLVICIPVVLR 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           EA+  GK    H  H+++HG LHL+GYDH   D+DA  ME +E  IL  LG  +PY
Sbjct: 101 EASEQGKAPLTHFTHMLVHGTLHLMGYDHETSDEDAEEMESIEIEILAKLGFENPY 156


>gi|30264373|ref|NP_846750.1| putative metalloprotease [Bacillus anthracis str. Ames]
 gi|47529824|ref|YP_021173.1| putative metalloprotease [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187198|ref|YP_030450.1| putative metalloprotease [Bacillus anthracis str. Sterne]
 gi|49478831|ref|YP_038358.1| putative metalloprotease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52141201|ref|YP_085629.1| putative metalloprotease [Bacillus cereus E33L]
 gi|118479472|ref|YP_896623.1| putative metalloprotease [Bacillus thuringiensis str. Al Hakam]
 gi|165872063|ref|ZP_02216703.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0488]
 gi|167634675|ref|ZP_02392995.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0442]
 gi|167638548|ref|ZP_02396824.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0193]
 gi|170687424|ref|ZP_02878641.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0465]
 gi|170707368|ref|ZP_02897822.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0389]
 gi|177653283|ref|ZP_02935535.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0174]
 gi|190566886|ref|ZP_03019802.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis
           Tsiankovskii-I]
 gi|196034368|ref|ZP_03101777.1| conserved hypothetical protein TIGR00043 [Bacillus cereus W]
 gi|196039279|ref|ZP_03106585.1| conserved hypothetical protein TIGR00043 [Bacillus cereus
           NVH0597-99]
 gi|196046290|ref|ZP_03113516.1| conserved hypothetical protein TIGR00043 [Bacillus cereus 03BB108]
 gi|206978415|ref|ZP_03239284.1| conserved hypothetical protein TIGR00043 [Bacillus cereus H3081.97]
 gi|217961793|ref|YP_002340363.1| putative metalloprotease [Bacillus cereus AH187]
 gi|218905440|ref|YP_002453274.1| conserved hypothetical protein TIGR00043 [Bacillus cereus AH820]
 gi|222097748|ref|YP_002531805.1| metalloprotease [Bacillus cereus Q1]
 gi|225866284|ref|YP_002751662.1| conserved hypothetical protein TIGR00043 [Bacillus cereus 03BB102]
 gi|227817079|ref|YP_002817088.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           CDC 684]
 gi|229601436|ref|YP_002868592.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0248]
 gi|254684060|ref|ZP_05147920.1| putative metalloprotease [Bacillus anthracis str. CNEVA-9066]
 gi|254721894|ref|ZP_05183683.1| putative metalloprotease [Bacillus anthracis str. A1055]
 gi|254736408|ref|ZP_05194114.1| putative metalloprotease [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741446|ref|ZP_05199133.1| putative metalloprotease [Bacillus anthracis str. Kruger B]
 gi|254750884|ref|ZP_05202923.1| putative metalloprotease [Bacillus anthracis str. Vollum]
 gi|254757788|ref|ZP_05209815.1| putative metalloprotease [Bacillus anthracis str. Australia 94]
 gi|301055795|ref|YP_003794006.1| hypothetical protein BACI_c42720 [Bacillus anthracis CI]
 gi|33301868|sp|Q81LT4|RRMF_BACAN RecName: Full=Probable rRNA maturation factor
 gi|59799092|sp|Q634N8|RRMF_BACCZ RecName: Full=Probable rRNA maturation factor
 gi|59799112|sp|Q6HDL8|RRMF_BACHK RecName: Full=Probable rRNA maturation factor
 gi|145558821|sp|A0RIS3|RRMF_BACAH RecName: Full=Probable rRNA maturation factor
 gi|226706167|sp|B7JN28|RRMF_BACC0 RecName: Full=Probable rRNA maturation factor
 gi|226706184|sp|B7HPK2|RRMF_BACC7 RecName: Full=Probable rRNA maturation factor
 gi|254803861|sp|B9IY70|RRMF_BACCQ RecName: Full=Probable rRNA maturation factor
 gi|254803907|sp|C1ESJ7|RRMF_BACC3 RecName: Full=Probable rRNA maturation factor
 gi|254803928|sp|C3P8K9|RRMF_BACAA RecName: Full=Probable rRNA maturation factor
 gi|254803930|sp|C3L5Q6|RRMF_BACAC RecName: Full=Probable rRNA maturation factor
 gi|30259031|gb|AAP28236.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           Ames]
 gi|47504972|gb|AAT33648.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49181125|gb|AAT56501.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           Sterne]
 gi|49330387|gb|AAT61033.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51974670|gb|AAU16220.1| conserved hypothetical protein [Bacillus cereus E33L]
 gi|118418697|gb|ABK87116.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|164712194|gb|EDR17731.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0488]
 gi|167513396|gb|EDR88766.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0193]
 gi|167530127|gb|EDR92862.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0442]
 gi|170127612|gb|EDS96485.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0389]
 gi|170668619|gb|EDT19365.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0465]
 gi|172081565|gb|EDT66637.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0174]
 gi|190561877|gb|EDV15846.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992910|gb|EDX56869.1| conserved hypothetical protein TIGR00043 [Bacillus cereus W]
 gi|196022760|gb|EDX61441.1| conserved hypothetical protein TIGR00043 [Bacillus cereus 03BB108]
 gi|196029906|gb|EDX68507.1| conserved hypothetical protein TIGR00043 [Bacillus cereus
           NVH0597-99]
 gi|206743371|gb|EDZ54809.1| conserved hypothetical protein TIGR00043 [Bacillus cereus H3081.97]
 gi|217066303|gb|ACJ80553.1| conserved hypothetical protein TIGR00043 [Bacillus cereus AH187]
 gi|218537495|gb|ACK89893.1| conserved hypothetical protein TIGR00043 [Bacillus cereus AH820]
 gi|221241806|gb|ACM14516.1| Predicted metal-dependent hydrolase [Bacillus cereus Q1]
 gi|225787544|gb|ACO27761.1| conserved hypothetical protein TIGR00043 [Bacillus cereus 03BB102]
 gi|227007063|gb|ACP16806.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           CDC 684]
 gi|229265844|gb|ACQ47481.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0248]
 gi|300377964|gb|ADK06868.1| protein of unknown function UPF0054 [Bacillus cereus biovar
           anthracis str. CI]
 gi|324328207|gb|ADY23467.1| metal-binding heat shock protein [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 156

 Score = 80.5 bits (197), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 155


>gi|323490063|ref|ZP_08095284.1| putative metalloprotease [Planococcus donghaensis MPA1U2]
 gi|323396359|gb|EGA89184.1| putative metalloprotease [Planococcus donghaensis MPA1U2]
          Length = 160

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 12/141 (8%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----- 87
           E+ F K +    +K   V ++  E+S+ F  +  I  +N EYRG D+PT+V+SF      
Sbjct: 17  ELDFVKKILEHAAKQEKVTDS--EVSVTFVTNEMIRDINREYRGKDQPTDVISFAMEELG 74

Query: 88  ---TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
              TA   S      MLGDI+++ +  + +A   G  FE  L  L IHGFLHLLGYDH+ 
Sbjct: 75  EGETAIIGS--QEPRMLGDIIISLDRTKEQAEDFGHSFERELGFLAIHGFLHLLGYDHMT 132

Query: 145 DKDACVMEGLERSILEDLGIN 165
           ++D   M   +  IL  LGI 
Sbjct: 133 EEDEKKMFSRQEEILVSLGIT 153


>gi|260494090|ref|ZP_05814221.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|260198236|gb|EEW95752.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
          Length = 163

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 5/116 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LSL+ TD+  I+ +N EYR  D PT+V+SF  A+  ++  +      LGDI+++ E +E 
Sbjct: 50  LSLLLTDNRNIQVINREYRDKDAPTDVISF--AYHETEDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +A+     FE    +++ HG LH+LGYDH++++D  +M   E +IL   G    Y+
Sbjct: 108 QASEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKIMREREEAILSSFGYTRDYK 163


>gi|146284075|ref|YP_001174228.1| putative metalloprotease [Pseudomonas stutzeri A1501]
 gi|166232639|sp|A4VQY5|RRMF_PSEU5 RecName: Full=Probable rRNA maturation factor
 gi|145572280|gb|ABP81386.1| predicted metal-dependent hydrolase [Pseudomonas stutzeri A1501]
 gi|327482392|gb|AEA85702.1| putative metalloprotease [Pseudomonas stutzeri DSM 4166]
          Length = 160

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 68/116 (58%), Gaps = 1/116 (0%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++   D      LN  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA
Sbjct: 36  ELTIRLVDEEEGRELNRTWRQKDYATNVLSFP-ADVPDEFLDIPLLGDLVICVPVVEREA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              GK  + H  HL+IHG LHLLGYDH++D +A  ME LER +L +LG  DPY  D
Sbjct: 95  AEQGKTLDAHWAHLVIHGCLHLLGYDHIEDAEAEEMEALERQLLAELGHPDPYAED 150


>gi|229019527|ref|ZP_04176344.1| metalloprotease [Bacillus cereus AH1273]
 gi|229025769|ref|ZP_04182168.1| metalloprotease [Bacillus cereus AH1272]
 gi|228735477|gb|EEL86073.1| metalloprotease [Bacillus cereus AH1272]
 gi|228741783|gb|EEL91966.1| metalloprotease [Bacillus cereus AH1273]
          Length = 143

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF            +      MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIIGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 142


>gi|229169051|ref|ZP_04296767.1| metalloprotease [Bacillus cereus AH621]
 gi|228614460|gb|EEK71569.1| metalloprotease [Bacillus cereus AH621]
          Length = 143

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 142


>gi|257413987|ref|ZP_04744887.2| putative metalloprotease [Roseburia intestinalis L1-82]
 gi|257201590|gb|EEU99874.1| putative metalloprotease [Roseburia intestinalis L1-82]
          Length = 169

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++L  TD+  I  +N EYR ID PT+VLSFP     S G                   
Sbjct: 42  AEINLTLTDNDGIHAINKEYRDIDAPTDVLSFPMLSYESAGDFSKLEDDYDDNFNPDTGE 101

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           +MLGDI+++ + ++ +A   G   +     LI+H  LHL GYDH+  ++A +MEG +  I
Sbjct: 102 IMLGDIIISVDKVKEQAKSYGHSEKREYAFLILHSMLHLFGYDHMTPEEAAIMEGKQTEI 161

Query: 159 LEDLGI 164
           L ++ I
Sbjct: 162 LNEMNI 167


>gi|319892627|ref|YP_004149502.1| metal-dependent hydrolase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162323|gb|ADV05866.1| metal-dependent hydrolase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464335|gb|ADX76488.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 153

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 7/116 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----LGDIVLAYE 109
            ELS+ F D   I+ +N +YR  DK T+V+SF  AF   +     M     LGDI++  +
Sbjct: 38  AELSVTFVDKAEIQEINRDYRQKDKVTDVISF--AFEEEEDIFEGMDVPRVLGDIIICTD 95

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +   +A   G  FE  L  L +HGFLHLLGYDH+ ++D  VM G ++ IL   G+ 
Sbjct: 96  VAAEQAEQYGHSFERELGFLALHGFLHLLGYDHMTEEDEKVMFGRQKDILNQFGLT 151


>gi|187477342|ref|YP_785366.1| putative metalloprotease [Bordetella avium 197N]
 gi|123514086|sp|Q2KWD6|RRMF_BORA1 RecName: Full=Probable rRNA maturation factor
 gi|115421928|emb|CAJ48448.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 161

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--MLGDIVLAYEI 110
              EL++          LN ++RG D  TNVL+F        G   L    GDIV+   +
Sbjct: 46  QAAELNVRLVGQAEGRRLNADFRGRDYATNVLTFEY------GVDPLGTARGDIVICAPV 99

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +  EA    K F +H  HL IHG LH LGYDH+  ++A  ME LE  IL  +GI DPY
Sbjct: 100 LAREAREQKKSFVDHATHLTIHGVLHALGYDHIKVREAKRMEALETRILARMGIADPY 157


>gi|229061996|ref|ZP_04199322.1| metalloprotease [Bacillus cereus AH603]
 gi|229135128|ref|ZP_04263930.1| metalloprotease [Bacillus cereus BDRD-ST196]
 gi|228648357|gb|EEL04390.1| metalloprotease [Bacillus cereus BDRD-ST196]
 gi|228717305|gb|EEL68978.1| metalloprotease [Bacillus cereus AH603]
          Length = 143

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 142


>gi|291536163|emb|CBL09275.1| conserved hypothetical protein TIGR00043 [Roseburia intestinalis
           M50/1]
          Length = 165

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++L  TD+  I  +N EYR ID PT+VLSFP     S G                   
Sbjct: 38  AEINLTLTDNDGIHAINKEYRDIDAPTDVLSFPMLSYESAGDFSKLEDDYDDNFNPDTGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           +MLGDI+++ + ++ +A   G   +     LI+H  LHL GYDH+  ++A +MEG +  I
Sbjct: 98  IMLGDIIISVDKVKEQAKSYGHSEKREYAFLILHSMLHLFGYDHMTPEEAAIMEGKQTEI 157

Query: 159 LEDLGI 164
           L ++ I
Sbjct: 158 LNEMNI 163


>gi|229013523|ref|ZP_04170657.1| metalloprotease [Bacillus mycoides DSM 2048]
 gi|228747760|gb|EEL97629.1| metalloprotease [Bacillus mycoides DSM 2048]
          Length = 136

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 16  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 75

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 76  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 135


>gi|229098774|ref|ZP_04229712.1| metalloprotease [Bacillus cereus Rock3-29]
 gi|229117799|ref|ZP_04247164.1| metalloprotease [Bacillus cereus Rock1-3]
 gi|228665662|gb|EEL21139.1| metalloprotease [Bacillus cereus Rock1-3]
 gi|228684618|gb|EEL38558.1| metalloprotease [Bacillus cereus Rock3-29]
          Length = 143

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 142


>gi|227500708|ref|ZP_03930757.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
 gi|227217166|gb|EEI82515.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
          Length = 443

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 65/113 (57%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           E+  E+S+ F D   I+ LN E+R ID+ T+VLSFP     +     +MLGDIV+  ++ 
Sbjct: 33  EDNYEVSITFVDREEIQRLNKEFRNIDRQTDVLSFPLDDDMNLPGEDIMLGDIVICMDVA 92

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           + +A   G      +++L  H  LHLLGYDH+++ D   M   E+ I+ +L +
Sbjct: 93  KDQAREFGHSLRREIMYLTCHSTLHLLGYDHMEEDDKRKMRAREKEIMRNLRV 145


>gi|148653768|ref|YP_001280861.1| hypothetical protein PsycPRwf_1971 [Psychrobacter sp. PRwf-1]
 gi|148572852|gb|ABQ94911.1| protein of unknown function UPF0054 [Psychrobacter sp. PRwf-1]
          Length = 185

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           +L +  TD+     LN E R  D  TN+LS+P+   +   +    L LG++++ +++++ 
Sbjct: 67  QLGVYITDAVEGRALNLEARDKDYATNILSYPSELPAFIIEQMPELALGELIVCHDVVKQ 126

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           +A    K    H+ HL++HG LHLLG+DH +       MEG E +ILE LGI +PY
Sbjct: 127 QAAEQHKTVAEHVTHLLVHGILHLLGFDHELGQAQQDEMEGFEIAILEQLGIGNPY 182


>gi|229104934|ref|ZP_04235591.1| metalloprotease [Bacillus cereus Rock3-28]
 gi|228678508|gb|EEL32728.1| metalloprotease [Bacillus cereus Rock3-28]
          Length = 143

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGTEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 142


>gi|162147625|ref|YP_001602086.1| hypothetical protein GDI_1841 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786202|emb|CAP55784.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 152

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS 98
           A+    ++  +  +    ++++  +   I  LN  +R  +KPTNVL+F       D    
Sbjct: 15  ALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLNARHRDRNKPTNVLTF-------DYPGG 67

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L  GDI++A E +  EA   G+   +HL+HL++HG LHL G+DH    +A  ME  E  I
Sbjct: 68  LPGGDIMIALETVRREAQAAGRPIRHHLMHLVVHGILHLRGHDHHQAGEARRMEMEEARI 127

Query: 159 LEDLGINDPYE 169
           L  L + +P++
Sbjct: 128 LGRLSVPNPWK 138


>gi|19704081|ref|NP_603643.1| metal-binding protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|26006903|sp|Q8R5X4|RRMF_FUSNN RecName: Full=Probable rRNA maturation factor
 gi|19714281|gb|AAL94942.1| Hypothetical Metal-Binding Protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 162

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEA 115
           LSL+ TD+  I+ +N EYR  D PT+V+SF           S   LGDI+++ E +E +A
Sbjct: 50  LSLLLTDNENIQVINREYRDKDAPTDVISFAYHETEDFNIGSYDTLGDIIISLERVEEQA 109

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +     FE    +++ HG LH+LGYDH++++D  +M   E +IL   G
Sbjct: 110 SEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKLMREREEAILSSFG 157


>gi|312793455|ref|YP_004026378.1| hypothetical protein Calkr_1257 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180595|gb|ADQ40765.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 158

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S++  D++ I+ LN 
Sbjct: 1   MKIIIQN--QQDKVDVDQHISKIIEESIVNTIK--VFLEEENFEISVLIVDNNFIKELNK 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC---------SSLMLGDIVLAYEIIEIEANVLGKEFE 123
            YR ++K T+VLSFP  F   +G            + LGDIV++ E    +A   G   E
Sbjct: 57  NYRNVNKETDVLSFPI-FEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAEEFGHSLE 115

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             + +L +H  LHLLG+DH++D D  VM   E  IL+ +G+
Sbjct: 116 REVAYLTVHSVLHLLGFDHIEDDDRKVMREYEEQILQSMGL 156


>gi|329924060|ref|ZP_08279323.1| translation metalloprotein YbeY [Paenibacillus sp. HGF5]
 gi|328940899|gb|EGG37207.1| translation metalloprotein YbeY [Paenibacillus sp. HGF5]
          Length = 165

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 14/124 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--------------ML 101
           E+ L F D   I  LN EYRGID+PT+VLSF     ++D    +              +L
Sbjct: 41  EVDLTFVDDEGIHELNREYRGIDRPTDVLSFAMNEITNDELEIIYELEEGEELESVPDVL 100

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI+++    ++++   G   E  L  L +HGFLHLLGYDH D+     M G + ++L +
Sbjct: 101 GDIIISVPRAKLQSEEYGHSLERELGFLFVHGFLHLLGYDHQDEASEAEMMGKQEAVLAE 160

Query: 162 LGIN 165
           +G+ 
Sbjct: 161 VGLT 164


>gi|260222300|emb|CBA31726.1| Putative metalloprotease Rfer_0737 [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 147

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 7/113 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D+   +TLN EYR  D  TNVL+F       D     +  D+VL   ++  EA
Sbjct: 42  EITVRIVDAEEGQTLNREYRQKDYATNVLTF-------DYTQEPVTADLVLCAPVVAKEA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K  E H  H+I+HG LH  G+DH  D+DA VME  E  I+  LG  +PY
Sbjct: 95  KEQKKTLEAHYAHMIVHGTLHAQGWDHELDEDAEVMELRESEIMARLGFKNPY 147


>gi|149183353|ref|ZP_01861791.1| hypothetical protein BSG1_06587 [Bacillus sp. SG-1]
 gi|148848950|gb|EDL63162.1| hypothetical protein BSG1_06587 [Bacillus sp. SG-1]
          Length = 156

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 8/121 (6%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDI 104
           E   EL++ F  + RI+ +N EYR  D+PT+V+SF              DG   + LGDI
Sbjct: 36  EPASELTVSFVTNERIQEINKEYRDKDQPTDVISFALEELGEDETVIVGDGIPRI-LGDI 94

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E  + +A+  G  F   L  L +HGFLHLLGYDH++++D   M G ++ IL+  G+
Sbjct: 95  IISVEKAKDQADEYGHSFSRELGFLALHGFLHLLGYDHMNEEDEKRMFGRQKEILDGYGL 154

Query: 165 N 165
            
Sbjct: 155 Q 155


>gi|284159397|ref|YP_441146.3| hypothetical protein BTH_I0589 [Burkholderia thailandensis E264]
 gi|123537980|sp|Q2T103|RRMF_BURTA RecName: Full=Probable rRNA maturation factor
 gi|83655057|gb|ABC39120.1| conserved hypothetical protein TIGR00043, putative [Burkholderia
           thailandensis E264]
          Length = 437

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 288 PELDLAV-----QYGDEIGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 339

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 340 TLNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 395

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 396 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 437


>gi|261405613|ref|YP_003241854.1| hypothetical protein GYMC10_1764 [Paenibacillus sp. Y412MC10]
 gi|261282076|gb|ACX64047.1| protein of unknown function UPF0054 [Paenibacillus sp. Y412MC10]
          Length = 165

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 14/124 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--------------ML 101
           E+ L F D   I  LN EYRGID+PT+VLSF     ++D    +              +L
Sbjct: 41  EVDLTFVDDEGIHELNREYRGIDRPTDVLSFAMNEITNDELEIIYELEEGEELESVPDVL 100

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI+++    ++++   G   E  L  L +HGFLHLLGYDH D+     M G + ++L +
Sbjct: 101 GDIIISVPRAKLQSEEYGHSLERELGFLFVHGFLHLLGYDHQDEASEAEMMGKQEAVLAE 160

Query: 162 LGIN 165
           +G+ 
Sbjct: 161 VGLT 164


>gi|257140192|ref|ZP_05588454.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           thailandensis E264]
          Length = 265

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 116 PELDLAVQ-----YGDEIGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 167

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 168 TLNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 223

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 224 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 264


>gi|294791926|ref|ZP_06757074.1| putative metalloprotease [Veillonella sp. 6_1_27]
 gi|294457156|gb|EFG25518.1| putative metalloprotease [Veillonella sp. 6_1_27]
          Length = 158

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 9/131 (6%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           + V + +S+ Y ++E+  E+S++  ++ +I  LN EYRGID+PT+VLSF  A    D   
Sbjct: 22  RKVCDEVSRVYGLEED--EMSILLCNNAKIHELNKEYRGIDRPTDVLSF--ALNEGDDYE 77

Query: 98  SL-----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M 
Sbjct: 78  GSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEMR 137

Query: 153 GLERSILEDLG 163
             E  IL +LG
Sbjct: 138 TEEEFILGNLG 148


>gi|269798052|ref|YP_003311952.1| hypothetical protein Vpar_0991 [Veillonella parvula DSM 2008]
 gi|269094681|gb|ACZ24672.1| protein of unknown function UPF0054 [Veillonella parvula DSM 2008]
          Length = 158

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 9/131 (6%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           + V + +S+ Y ++E+  E+S++  D+ +I  LN EYRGID+PT+VLSF  A    D   
Sbjct: 22  RKVCDEVSRVYGLEED--EMSILLCDNAKIHELNKEYRGIDRPTDVLSF--ALNEGDDYE 77

Query: 98  SL-----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D++   M 
Sbjct: 78  GSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEEKKEMR 137

Query: 153 GLERSILEDLG 163
             E  IL +LG
Sbjct: 138 TEEEFILGNLG 148


>gi|331091150|ref|ZP_08339992.1| hypothetical protein HMPREF9477_00635 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405372|gb|EGG84908.1| hypothetical protein HMPREF9477_00635 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 164

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---------AFASSD----GCSS--L 99
            E++L+ T +  I+ +N E+R ID+ T+VLSFP          AF   D     C +  L
Sbjct: 38  AEVNLLLTMNKEIQEMNAEFRHIDRATDVLSFPMIDYEKAGEFAFLEEDDSYFNCDTGEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           MLGDIV++ E +  +A   G   +     LI H  LHLLGYDH+++++   ME  ++ IL
Sbjct: 98  MLGDIVISKEKVIAQAEEYGHTIKREYAFLIAHSMLHLLGYDHMEEQERLEMERKQKEIL 157

Query: 160 EDLGIN 165
           E LGI 
Sbjct: 158 EQLGIT 163


>gi|167579898|ref|ZP_02372772.1| hypothetical protein BthaT_17231 [Burkholderia thailandensis TXDOH]
 gi|167617971|ref|ZP_02386602.1| hypothetical protein BthaB_16811 [Burkholderia thailandensis Bt4]
          Length = 265

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 116 PELDLAVQ-----YGDEIGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 167

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 168 TLNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 223

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 224 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 264


>gi|257882778|ref|ZP_05662431.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257886864|ref|ZP_05666517.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257898044|ref|ZP_05677697.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|293571620|ref|ZP_06682641.1| conserved hypothetical protein [Enterococcus faecium E980]
 gi|294622996|ref|ZP_06701885.1| conserved hypothetical protein [Enterococcus faecium U0317]
 gi|257818436|gb|EEV45764.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257822918|gb|EEV49850.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257835956|gb|EEV61030.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|291597552|gb|EFF28714.1| conserved hypothetical protein [Enterococcus faecium U0317]
 gi|291608290|gb|EFF37591.1| conserved hypothetical protein [Enterococcus faecium E980]
          Length = 158

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----------PTAFASSDGCSSLMLGDI 104
            E+S+ F D+  I+ +N +YRG D PT+V+SF          P  F   +     +LGDI
Sbjct: 37  TEMSVTFMDNAAIQVINRDYRGKDAPTDVISFALEEEGEDEIPVIFEDGENPLPRVLGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E    +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+
Sbjct: 97  MISTERAAEQAEAYGHSYDRELGFLAVHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGL 156

Query: 165 N 165
            
Sbjct: 157 K 157


>gi|257884086|ref|ZP_05663739.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257819924|gb|EEV47072.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
          Length = 158

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----------PTAFASSDGCSSLMLGDI 104
            E+S+ F D+  I+ +N +YRG D PT+V+SF          P  F   +     +LGDI
Sbjct: 37  TEMSVTFMDNATIQVINRDYRGKDAPTDVISFALEEEGEDEIPVIFEDGENPLPRVLGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E    +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+
Sbjct: 97  MISIERAAEQAEAYGHSYDRELGFLAVHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGL 156

Query: 165 N 165
            
Sbjct: 157 K 157


>gi|163942059|ref|YP_001646943.1| putative metalloprotease [Bacillus weihenstephanensis KBAB4]
 gi|226701663|sp|A9VHT0|RRMF_BACWK RecName: Full=Probable rRNA maturation factor
 gi|163864256|gb|ABY45315.1| protein of unknown function UPF0054 [Bacillus weihenstephanensis
           KBAB4]
          Length = 156

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 155


>gi|227551970|ref|ZP_03982019.1| metal-dependent hydrolase [Enterococcus faecium TX1330]
 gi|257895438|ref|ZP_05675091.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|293378305|ref|ZP_06624474.1| metalloprotein, YbeY family [Enterococcus faecium PC4.1]
 gi|293568656|ref|ZP_06679971.1| conserved hypothetical protein [Enterococcus faecium E1071]
 gi|227178875|gb|EEI59847.1| metal-dependent hydrolase [Enterococcus faecium TX1330]
 gi|257832003|gb|EEV58424.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|291588616|gb|EFF20449.1| conserved hypothetical protein [Enterococcus faecium E1071]
 gi|292643169|gb|EFF61310.1| metalloprotein, YbeY family [Enterococcus faecium PC4.1]
          Length = 158

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----------PTAFASSDGCSSLMLGDI 104
            E+S+ F D+  I+ +N +YRG D PT+V+SF          P  F   +     +LGDI
Sbjct: 37  TEMSVTFMDNAAIQVINRDYRGKDAPTDVISFALEEEGEDEIPVIFEDGENPLPRVLGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E    +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+
Sbjct: 97  MISTERAAEQAEAYGHSYDRELGFLAVHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGL 156

Query: 165 N 165
            
Sbjct: 157 K 157


>gi|209542256|ref|YP_002274485.1| hypothetical protein Gdia_0068 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209529933|gb|ACI49870.1| protein of unknown function UPF0054 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 202

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS 98
           A+    ++  +  +    ++++  +   I  LN  +R  +KPTNVL+F       D    
Sbjct: 65  ALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLNARHRDRNKPTNVLTF-------DYPGG 117

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L  GDI++A E +  EA   G+   +HL+HL++HG LHL G+DH    +A  ME  E  I
Sbjct: 118 LPGGDIMIALETVRREAQAAGRPIRHHLMHLVVHGILHLRGHDHHQAGEARRMEMEEARI 177

Query: 159 LEDLGINDPYE 169
           L  L + +P++
Sbjct: 178 LGRLSVPNPWK 188


>gi|312135090|ref|YP_004002428.1| hypothetical protein Calow_1065 [Caldicellulosiruptor owensensis
           OL]
 gi|311775141|gb|ADQ04628.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           owensensis OL]
          Length = 158

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 14/161 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +   +V+N I    F++E   E+S++  D++ I+ LN 
Sbjct: 1   MKIFIQN--QQDKVDVAEHISKIIEASVANTIK--IFLQEENFEVSVLIVDNNLIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC---------SSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +YR I+K T+VLSFP  F   +G            + LGDIV++ E    +A   G   E
Sbjct: 57  KYRNINKETDVLSFPI-FEFKNGQLQEDIVIVEDEIPLGDIVISIEKALQQAEEFGHSLE 115

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+
Sbjct: 116 REVAYLTVHSVLHLLGFDHIEEDDRKVMRKYEEQILDSMGL 156


>gi|218132189|ref|ZP_03460993.1| hypothetical protein BACPEC_00046 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992910|gb|EEC58910.1| hypothetical protein BACPEC_00046 [Bacteroides pectinophilus ATCC
           43243]
          Length = 173

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 19/160 (11%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKG--YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           E  +R + E+   + ++ +I++   Y      VE++++ TD+  I   N EYRG+D PT+
Sbjct: 8   ETDIRIVPEIPEEEIINKVITQACDYEKCPYEVEVNVLLTDNESIHETNREYRGVDAPTD 67

Query: 83  VLSFPT---------AFASSDG--------CSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           VLSFP          AF                L+LGDIV++ E +  +A   G   +  
Sbjct: 68  VLSFPMIDYEAPADFAFLEDSPVEDYFDPDTGELLLGDIVISVEKVMEQAEKYGHSVKRE 127

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L  L+ H  LHL GYDH++  +A VME  +  IL ++GI 
Sbjct: 128 LAFLVAHSMLHLFGYDHMEPDEAEVMEDKQNQILLNIGIT 167


>gi|69247283|ref|ZP_00604284.1| Protein of unknown function UPF0054 [Enterococcus faecium DO]
 gi|257879928|ref|ZP_05659581.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257890443|ref|ZP_05670096.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257893049|ref|ZP_05672702.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|258616605|ref|ZP_05714375.1| putative metalloprotease [Enterococcus faecium DO]
 gi|260559562|ref|ZP_05831742.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|261208626|ref|ZP_05923063.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289566735|ref|ZP_06447149.1| metalloprotease [Enterococcus faecium D344SRF]
 gi|293556348|ref|ZP_06674929.1| conserved hypothetical protein [Enterococcus faecium E1039]
 gi|293559426|ref|ZP_06675965.1| conserved hypothetical protein [Enterococcus faecium E1162]
 gi|294616316|ref|ZP_06696109.1| hypothetical protein EfmE1636_2374 [Enterococcus faecium E1636]
 gi|294618706|ref|ZP_06698239.1| conserved hypothetical protein [Enterococcus faecium E1679]
 gi|314939542|ref|ZP_07846770.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133a04]
 gi|314942703|ref|ZP_07849529.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133C]
 gi|314948959|ref|ZP_07852325.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0082]
 gi|314953306|ref|ZP_07856234.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133A]
 gi|314993386|ref|ZP_07858751.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133B]
 gi|314995736|ref|ZP_07860825.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133a01]
 gi|68194905|gb|EAN09375.1| Protein of unknown function UPF0054 [Enterococcus faecium DO]
 gi|257814156|gb|EEV42914.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257826803|gb|EEV53429.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257829428|gb|EEV56035.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260074230|gb|EEW62552.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|260077128|gb|EEW64848.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289161456|gb|EFD09342.1| metalloprotease [Enterococcus faecium D344SRF]
 gi|291590830|gb|EFF22546.1| hypothetical protein EfmE1636_2374 [Enterococcus faecium E1636]
 gi|291595049|gb|EFF26393.1| conserved hypothetical protein [Enterococcus faecium E1679]
 gi|291601415|gb|EFF31686.1| conserved hypothetical protein [Enterococcus faecium E1039]
 gi|291606640|gb|EFF36035.1| conserved hypothetical protein [Enterococcus faecium E1162]
 gi|313590008|gb|EFR68853.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133a01]
 gi|313592051|gb|EFR70896.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133B]
 gi|313594649|gb|EFR73494.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133A]
 gi|313598568|gb|EFR77413.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133C]
 gi|313641178|gb|EFS05758.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133a04]
 gi|313644618|gb|EFS09198.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0082]
          Length = 158

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----------PTAFASSDGCSSLMLGDI 104
            E+S+ F D+  I+ +N +YRG D PT+V+SF          P  F   +     +LGDI
Sbjct: 37  TEMSVTFMDNAAIQVINRDYRGKDAPTDVISFALEEEGEDEIPVIFEDGENPLPRVLGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E    +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+
Sbjct: 97  MISIERAAEQAEAYGHSYDRELGFLAVHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGL 156

Query: 165 N 165
            
Sbjct: 157 K 157


>gi|300813825|ref|ZP_07094130.1| translation metalloprotein YbeY [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512012|gb|EFK39207.1| translation metalloprotein YbeY [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 146

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 10/121 (8%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD 103
           I K Y+V       S+ F D + I+ LN +YR +DK T+VLSFP      D    ++LGD
Sbjct: 34  IDKEYYV-------SVSFVDDNEIKNLNRDYRNVDKVTDVLSFPMDEEYED---KIILGD 83

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           IV+    +  +A   G      L +L +H  LHLLGYDH++++D  +M   E+ I++ L 
Sbjct: 84  IVINMARVLSQAKEFGHSNRRELSYLCVHSTLHLLGYDHIEEEDRIIMRAKEKEIMDKLK 143

Query: 164 I 164
           I
Sbjct: 144 I 144


>gi|300812188|ref|ZP_07092630.1| translation metalloprotein YbeY [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496824|gb|EFK31904.1| translation metalloprotein YbeY [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 174

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---------AFASS 93
           L++K    K+N  E+S+ F D  R + +N +YR  D+PT+V+SF           A  + 
Sbjct: 31  LMAKKEIGKDNAQEMSINFVDEDRSQAINRDYRDKDRPTDVISFAIEDGDDGLDLAMFTQ 90

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           D   +  +GD+ +   +IE  +   G  F+    + I+HG+LHL GYDH++  +A  M G
Sbjct: 91  DPDFTEDIGDLFMCPSVIERHSKEYGTGFDREFGYTIVHGYLHLNGYDHIEPDEAKEMFG 150

Query: 154 LERSILEDLGI 164
           ++  ILE+ G+
Sbjct: 151 IQGKILEEYGL 161


>gi|237753148|ref|ZP_04583628.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375415|gb|EEO25506.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 146

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 9/106 (8%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           L+F ++ +I+ LN E+RGIDKPT+VLSFP  F       SL+LG IV++ E     A  L
Sbjct: 40  LLFVENAKIQALNLEFRGIDKPTDVLSFPLEF-------SLLLGSIVISVEFASKIAQEL 92

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           G    + +  L IHG LHLLG+DH  + D       ER I+E  G+
Sbjct: 93  GHSLNDEIALLFIHGVLHLLGFDH--EVDNGEHRERERKIVEKFGL 136


>gi|313903999|ref|ZP_07837379.1| protein of unknown function UPF0054 [Eubacterium cellulosolvens 6]
 gi|313471148|gb|EFR66470.1| protein of unknown function UPF0054 [Eubacterium cellulosolvens 6]
          Length = 181

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 18/129 (13%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-TAF-------------ASSDG----C 96
            E+S+ F D   I  +N E+RGIDK T+VLSFP T F             A++D      
Sbjct: 38  AEVSITFVDDEEIRRVNREFRGIDKVTDVLSFPVTQFTPPADFSILEDDEAAADSFDPES 97

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             L LGDI+++      +A   G   +  +  LI H  LHL+GYDH+ +++A VME  + 
Sbjct: 98  GELQLGDILISVSRAMKQAEEYGHSLKREIGFLIAHSVLHLMGYDHMTEEEATVMEKKQA 157

Query: 157 SILEDLGIN 165
             LEDLGI 
Sbjct: 158 RYLEDLGIT 166


>gi|312876030|ref|ZP_07736019.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797228|gb|EFR13568.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 158

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 10/125 (8%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC---------SSL 99
           F++E   E+S++  D++ I+ LN  YR ++K T+VLSFP  F   +G            +
Sbjct: 33  FLEEENFEISVLIVDNNFIKELNKNYRNVNKETDVLSFPI-FEFKNGKLLEDIVIMEDEI 91

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LGDIV++ E    +A   G   E  + +L +H  LHLLG+DH++D D  VM   E  IL
Sbjct: 92  PLGDIVISIEKAAQQAEEFGHSLEREVAYLTVHSVLHLLGFDHIEDDDRKVMREYEEQIL 151

Query: 160 EDLGI 164
           + +G+
Sbjct: 152 QSMGL 156


>gi|323340792|ref|ZP_08081044.1| metalloprotease [Lactobacillus ruminis ATCC 25644]
 gi|323091915|gb|EFZ34535.1| metalloprotease [Lactobacillus ruminis ATCC 25644]
          Length = 159

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 11/121 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+S+   D+  I  +N +YRG+DKPT+V+SF       D    ++           +GD
Sbjct: 37  TEMSVTLMDNEHIHEINKKYRGVDKPTDVISFAIEEDDPDEVPIILPEDEEFDIPKNIGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           I+++ + ++ +A  LG   +  L  L++HGFLHL GYDH+ ++D   M GL+R IL+  G
Sbjct: 97  IMVSMDKVKEQAEYLGHSEDRELGFLVVHGFLHLNGYDHMKEEDEKEMFGLQREILDSYG 156

Query: 164 I 164
           +
Sbjct: 157 L 157


>gi|227432227|ref|ZP_03914223.1| metal-dependent hydrolase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352000|gb|EEJ42230.1| metal-dependent hydrolase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 160

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 15/123 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------------PTAFASSDGCSSLMLG 102
            E+S+ F ++  I   N +YRGIDKPT+V+SF            P  F   D   +  +G
Sbjct: 38  TEMSVTFMNNEEIHQYNKKYRGIDKPTDVISFAIEEDGDDLPVLPDEFM--DAVLAKNIG 95

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILED 161
           DI+++ +II  +A  LG  +E  L  L++HGFLHL GYDH+  D +   M  L+R IL++
Sbjct: 96  DILVSVDIINSQAEYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFDLQREILDN 155

Query: 162 LGI 164
            G+
Sbjct: 156 YGL 158


>gi|160896671|ref|YP_001562253.1| hypothetical protein Daci_1224 [Delftia acidovorans SPH-1]
 gi|238687183|sp|A9BUG5|RRMF_DELAS RecName: Full=Probable rRNA maturation factor
 gi|160362255|gb|ABX33868.1| protein of unknown function UPF0054 [Delftia acidovorans SPH-1]
          Length = 152

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 17/120 (14%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----PTAFASSDGCSSLMLGDIVLAYE 109
            E+++   D+   + LN EYR  D  TNVL+F     PTA A           D+VL   
Sbjct: 42  AEITVRIVDAEEGQQLNREYRQKDYATNVLTFDYQQEPTAMA-----------DLVLCAP 90

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           ++E EA    K  E H  HL++HG LH  G+DH   ++DA  ME  E  I+ +LG  DPY
Sbjct: 91  VVEREAREQNKTLEEHYAHLLVHGTLHAQGWDHETSEQDAEEMEAYETEIMVELGFADPY 150


>gi|325661630|ref|ZP_08150254.1| hypothetical protein HMPREF0490_00988 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472157|gb|EGC75371.1| hypothetical protein HMPREF0490_00988 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 164

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L E V A+AV       Y       E++L+ T +  I  +N ++R ID+ T+VLSFP 
Sbjct: 18  RKLAEKVIAEAVD------YEQCPYETEVNLLLTMNEEIREMNRQFREIDRATDVLSFPM 71

Query: 89  AFASSDG---------------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
               + G                  LMLGDIV++ E +  +A   G   E     L+ H 
Sbjct: 72  VDYGTPGDFEFLEEDDSYFHPESGELMLGDIVISKEKVTAQAEEYGHTEEREFAFLVAHS 131

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHL GYDH+++ +  VME  +R ILE L I
Sbjct: 132 MLHLFGYDHMEEDERAVMEQKQREILERLNI 162


>gi|228954587|ref|ZP_04116612.1| metalloprotease [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229071806|ref|ZP_04205021.1| metalloprotease [Bacillus cereus F65185]
 gi|229081563|ref|ZP_04214061.1| metalloprotease [Bacillus cereus Rock4-2]
 gi|229180580|ref|ZP_04307922.1| metalloprotease [Bacillus cereus 172560W]
 gi|229192512|ref|ZP_04319475.1| metalloprotease [Bacillus cereus ATCC 10876]
 gi|228591089|gb|EEK48945.1| metalloprotease [Bacillus cereus ATCC 10876]
 gi|228603004|gb|EEK60483.1| metalloprotease [Bacillus cereus 172560W]
 gi|228701768|gb|EEL54256.1| metalloprotease [Bacillus cereus Rock4-2]
 gi|228711401|gb|EEL63361.1| metalloprotease [Bacillus cereus F65185]
 gi|228805244|gb|EEM51838.1| metalloprotease [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 154

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 34  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 153


>gi|218233833|ref|YP_002369110.1| putative metalloprotease [Bacillus cereus B4264]
 gi|226706180|sp|B7HCS7|RRMF_BACC4 RecName: Full=Probable rRNA maturation factor
 gi|218161790|gb|ACK61782.1| conserved hypothetical protein TIGR00043 [Bacillus cereus B4264]
          Length = 156

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 36  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 155


>gi|30022381|ref|NP_834012.1| putative metalloprotease [Bacillus cereus ATCC 14579]
 gi|33301866|sp|Q812T1|RRMF_BACCR RecName: Full=Probable rRNA maturation factor
 gi|29897939|gb|AAP11213.1| hypothetical Metal-Binding Protein [Bacillus cereus ATCC 14579]
          Length = 156

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 36  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 155


>gi|228960568|ref|ZP_04122217.1| metalloprotease [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229048022|ref|ZP_04193598.1| metalloprotease [Bacillus cereus AH676]
 gi|229111776|ref|ZP_04241324.1| metalloprotease [Bacillus cereus Rock1-15]
 gi|229129580|ref|ZP_04258550.1| metalloprotease [Bacillus cereus BDRD-Cer4]
 gi|229146888|ref|ZP_04275253.1| metalloprotease [Bacillus cereus BDRD-ST24]
 gi|229152503|ref|ZP_04280695.1| metalloprotease [Bacillus cereus m1550]
 gi|228631111|gb|EEK87748.1| metalloprotease [Bacillus cereus m1550]
 gi|228636716|gb|EEK93181.1| metalloprotease [Bacillus cereus BDRD-ST24]
 gi|228653897|gb|EEL09765.1| metalloprotease [Bacillus cereus BDRD-Cer4]
 gi|228671770|gb|EEL27066.1| metalloprotease [Bacillus cereus Rock1-15]
 gi|228723479|gb|EEL74848.1| metalloprotease [Bacillus cereus AH676]
 gi|228799168|gb|EEM46136.1| metalloprotease [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 154

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 34  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 153


>gi|257126606|ref|YP_003164720.1| hypothetical protein Lebu_1864 [Leptotrichia buccalis C-1013-b]
 gi|257050545|gb|ACV39729.1| protein of unknown function UPF0054 [Leptotrichia buccalis
           C-1013-b]
          Length = 153

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 11/122 (9%)

Query: 47  GYFVKENIVE--------LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS 98
           GY +K+   E        LSL+ T + +I+ +N EYR  D PT+V+SF  A+  ++   +
Sbjct: 27  GYILKDEYKEEFDKNEYYLSLLITTNEQIQEINCEYRQKDAPTDVISF--AYNETENFGA 84

Query: 99  L-MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           + MLGDIV++ E ++ +++  G   E    +++ HG LHLLGYDH++++D  VM   E  
Sbjct: 85  VNMLGDIVISIERVKEQSSEYGHSDEREFYYVLCHGMLHLLGYDHIEEQDKVVMRKREEE 144

Query: 158 IL 159
           IL
Sbjct: 145 IL 146


>gi|42519247|ref|NP_965177.1| hypothetical protein LJ1323 [Lactobacillus johnsonii NCC 533]
 gi|62901443|sp|Q74IY8|RRMF_LACJO RecName: Full=Probable rRNA maturation factor
 gi|41583535|gb|AAS09143.1| hypothetical protein LJ_1323 [Lactobacillus johnsonii NCC 533]
          Length = 175

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 13/155 (8%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + DE++     +  +   +SNL+  +K    KEN  E+S+ F  S +I  +N +YRG D+
Sbjct: 8   FNDEVNFLKDSDKDWITWISNLLLSAKKEIHKENTQEMSINFVSSKKIHEINKKYRGKDR 67

Query: 80  PTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           PT+V+SF           +AF S D      +GD+ L  E+I+  +      F     + 
Sbjct: 68  PTDVISFAIEDGLDEDFISAF-SDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFGYT 126

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++HG+LHL GYDH++D +A VM G++  +L + G+
Sbjct: 127 LVHGYLHLNGYDHIEDDEAKVMFGIQGKVLREYGL 161


>gi|329118104|ref|ZP_08246816.1| metal-dependent hydrolase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465764|gb|EGF12037.1| metal-dependent hydrolase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 165

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL---MLGDIVLAYEII 111
            E+SL+  D       N +YRG D  TNVLSF  A    + C+ L   + GD+V+  +I+
Sbjct: 50  AEISLILLDEPAARACNRDYRGKDYATNVLSF--ALDEGETCAPLSDGLHGDLVICPQIV 107

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             EA   GK  E H  HL IHG LHL+GYDH++D +A  ME LE  +L  L   DPY+
Sbjct: 108 LKEAAEQGKTPEQHYAHLTIHGTLHLMGYDHIEDTEAEEMETLETELLNQLAYPDPYK 165


>gi|152992855|ref|YP_001358576.1| metalloprotease [Sulfurovum sp. NBC37-1]
 gi|172048740|sp|A6Q9R0|RRMF_SULNB RecName: Full=Probable rRNA maturation factor
 gi|151424716|dbj|BAF72219.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 147

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 5/111 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--TAFASSDGCSSLMLGDIVLAYEIIEI 113
           E+ L+ TD+  I+ LN EYR  D PT+VLSFP  T F +      + LG IV++ + +  
Sbjct: 31  EIELIITDNENIQELNREYRDRDNPTDVLSFPLETPF-TEQSVFDIPLGTIVISADFVRE 89

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            A   G   ++ L  L IHG LHLLGYDH  + D   M   ER I+E+ G+
Sbjct: 90  RAKTYGHTEQDELKLLFIHGLLHLLGYDH--ETDEGEMRQKEREIIEEFGL 138


>gi|224370644|ref|YP_002604808.1| hypothetical protein HRM2_35790 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693361|gb|ACN16644.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 155

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 2/105 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+V TD   I  LN  YRG  KPTNVLSFP   +     +  +LGD+V++ E    EA
Sbjct: 39  ELSVVITDDAHIMALNQTYRGKAKPTNVLSFPMLDSEFTSIAPQLLGDLVISVETAMREA 98

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           +  G   +  L  L+IHG LHL+G+DH   +D  V   +E+  LE
Sbjct: 99  DEAGITLDERLSQLMIHGVLHLVGFDHEQGEDEAV--KMEQRSLE 141


>gi|182418401|ref|ZP_02949695.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237666831|ref|ZP_04526816.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182377783|gb|EDT75327.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237658030|gb|EEP55585.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 168

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 17/126 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GCSS 98
           E+SL+F D+  I  +N E R ID+ T+VLSFP                  F+ SD     
Sbjct: 39  EVSLLFVDNEEIREINNETRNIDRETDVLSFPMLDYDNKKIFKEMYKGYEFSQSDFDGEE 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIVL+ E    ++      FE    +L++H  LHLLGYDH++++D  +M   E  I
Sbjct: 99  LVLGDIVLSLEKALEQSLEFNHSFEREASYLVVHSVLHLLGYDHMEEEDKVIMRKREEEI 158

Query: 159 LEDLGI 164
           L +L I
Sbjct: 159 LNELNI 164


>gi|228941468|ref|ZP_04104019.1| metalloprotease [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974399|ref|ZP_04134968.1| metalloprotease [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228980992|ref|ZP_04141295.1| metalloprotease [Bacillus thuringiensis Bt407]
 gi|228778783|gb|EEM27047.1| metalloprotease [Bacillus thuringiensis Bt407]
 gi|228785449|gb|EEM33459.1| metalloprotease [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228818249|gb|EEM64323.1| metalloprotease [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 154

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 34  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDENEMFGRQKEILEAFGLG 153


>gi|294782140|ref|ZP_06747466.1| metalloprotease [Fusobacterium sp. 1_1_41FAA]
 gi|294480781|gb|EFG28556.1| metalloprotease [Fusobacterium sp. 1_1_41FAA]
          Length = 162

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LS++ TD+  I+ +N EYR  D PT+V+SF  A+  +D  +      LGDI+++ E +E 
Sbjct: 50  LSVLLTDNKNIQVINREYRDKDAPTDVISF--AYHETDDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +++     FE    +++ HG LH+LGYDH++++D  VM   E +IL   G
Sbjct: 108 QSSEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKVMREREEAILSSFG 157


>gi|294793789|ref|ZP_06758926.1| putative metalloprotease [Veillonella sp. 3_1_44]
 gi|294455359|gb|EFG23731.1| putative metalloprotease [Veillonella sp. 3_1_44]
          Length = 158

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 9/131 (6%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           + V + +S+ Y + E+  E+S++  ++ +I  LN EYRGID+PT+VLSF  A    D   
Sbjct: 22  RKVCDEVSRVYGLDED--EMSILLCNNAKIHELNKEYRGIDRPTDVLSF--ALNEGDDYE 77

Query: 98  SL-----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M 
Sbjct: 78  GSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEMR 137

Query: 153 GLERSILEDLG 163
             E  IL +LG
Sbjct: 138 TEEEFILGNLG 148


>gi|256845042|ref|ZP_05550500.1| metal-binding protein [Fusobacterium sp. 3_1_36A2]
 gi|256718601|gb|EEU32156.1| metal-binding protein [Fusobacterium sp. 3_1_36A2]
          Length = 162

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LSL+ TD+  I+ +N EYR  D PT+V+SF  A+  ++  +      LGDI+++ E +E 
Sbjct: 50  LSLLLTDNENIQVINREYRDKDAPTDVISF--AYHETEDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +A      FE    +++ HG LH+LGYDH++++D  +M   E +IL   G
Sbjct: 108 QAGEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKIMRKREEAILSSFG 157


>gi|261401807|ref|ZP_05987932.1| putative metalloprotease [Neisseria lactamica ATCC 23970]
 gi|269208047|gb|EEZ74502.1| putative metalloprotease [Neisseria lactamica ATCC 23970]
          Length = 171

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 37  AKAVSNLISKGYFVKE---------NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           A + +NL SK  F +             ++SL+  D       N +YRG D  TNVLSF 
Sbjct: 24  ASSAANLPSKHDFYRWAWSALKSGYRRADISLILLDEEAARAYNCDYRGKDYATNVLSFA 83

Query: 88  TAFASSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                +  C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D
Sbjct: 84  LNEGETLPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIED 143

Query: 146 KDACVMEGLERSILEDLGINDPYEVD 171
            +A +ME  E  ++   G  +PY  D
Sbjct: 144 DEAEIMEAEEIRLMRAAGYPNPYRED 169


>gi|326942085|gb|AEA17981.1| putative metalloprotease [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 156

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 36  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDENEMFGRQKEILEAFGLG 155


>gi|33595813|ref|NP_883456.1| putative metalloprotease [Bordetella parapertussis 12822]
 gi|46577410|sp|Q7WB68|RRMF_BORPA RecName: Full=Probable rRNA maturation factor
 gi|33565892|emb|CAE36440.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 157

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL L          LN E+RG D  TNVL+F       DG +    GDIV+   ++  EA
Sbjct: 46  ELGLRLVGLAEGRRLNREFRGRDYATNVLTFEYG-TGPDGVAR---GDIVVCVPVLAREA 101

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  HL +HG LH LGYDH+   +A  ME LE  +L  +GI DPY
Sbjct: 102 REQRKTLLDHAAHLTVHGTLHALGYDHIKAGEARRMEALETVVLARMGIADPY 154


>gi|284047990|ref|YP_003398329.1| protein of unknown function UPF0054 [Acidaminococcus fermentans DSM
           20731]
 gi|283952211|gb|ADB47014.1| protein of unknown function UPF0054 [Acidaminococcus fermentans DSM
           20731]
          Length = 160

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 11/142 (7%)

Query: 32  CEVVFAKAVSNLISKGYFV---KENIV---ELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
            E+   + +   + K   +   KEN+    E+ +   ++  I TLN +YRGID+PT+VLS
Sbjct: 10  TEIAIPEELEETLKKAMDIVARKENLTDNTEVDITIVNNEEIHTLNRDYRGIDRPTDVLS 69

Query: 86  FPTAFASS-----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           F            DG +  +LGD++++      +    G      + +L +HG LHLLGY
Sbjct: 70  FALDEGDEEPEVEDGEAEHLLGDVIISAPRAVEQGEEFGHGLTREMTYLAVHGMLHLLGY 129

Query: 141 DHVDDKDACVMEGLERSILEDL 162
           DH+++ D  VM   E  IL +L
Sbjct: 130 DHMEEADKRVMRAREEEILREL 151


>gi|168181634|ref|ZP_02616298.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum Bf]
 gi|237796401|ref|YP_002863953.1| putative metalloprotease [Clostridium botulinum Ba4 str. 657]
 gi|259646946|sp|C3L3F6|RRMF_CLOB6 RecName: Full=Probable rRNA maturation factor
 gi|182675188|gb|EDT87149.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum Bf]
 gi|229263327|gb|ACQ54360.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum Ba4
           str. 657]
          Length = 166

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 23/150 (15%)

Query: 36  FAKAVSNLISKGYFVKENIV----ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--- 88
           F   +  +I   Y +KE  V    E+S+VF D++ I+ +N +YR IDK T+VLSFP    
Sbjct: 17  FENKIKEIID--YALKEEKVNIDYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDY 74

Query: 89  -------------AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
                         F  SD    +L+LGDI L+ E  E ++   G  F     +L IH  
Sbjct: 75  EEGKVFKDVYLNYEFDESDLDEGNLILGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSV 134

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           LHLLGYDH+++++  +M   E  IL+   +
Sbjct: 135 LHLLGYDHMEEEEKAIMRQREEEILKSFNL 164


>gi|282882469|ref|ZP_06291090.1| putative metalloprotease [Peptoniphilus lacrimalis 315-B]
 gi|281297611|gb|EFA90086.1| putative metalloprotease [Peptoniphilus lacrimalis 315-B]
          Length = 146

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 10/121 (8%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD 103
           I K Y+V       S+ F D + I+ LN +YR +DK T+VLSFP      D    ++LGD
Sbjct: 34  IVKEYYV-------SVSFVDDNEIKNLNRDYRNVDKVTDVLSFPMDEEYED---KIILGD 83

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           IV+    +  +A   G      L +L +H  LHLLGYDH++++D  +M   E+ I++ L 
Sbjct: 84  IVINMARVLSQAKEFGHSNRRELSYLCVHSTLHLLGYDHIEEEDRIIMRAKEKEIMDKLK 143

Query: 164 I 164
           I
Sbjct: 144 I 144


>gi|225572106|ref|ZP_03780970.1| hypothetical protein RUMHYD_00400 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040440|gb|EEG50686.1| hypothetical protein RUMHYD_00400 [Blautia hydrogenotrophica DSM
           10507]
          Length = 164

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---------------CSSL 99
           V+++LV TD+  I+ +N ++R I+ PT+VLSFP     + G                  L
Sbjct: 38  VQINLVLTDNEEIQRVNQQFRDINAPTDVLSFPMIPFPTPGDYKILEEEDSYFDLDTGEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDI+++   +E +A   G         L+ H  LHLLGYDH+  K+A VME  +   L
Sbjct: 98  ILGDIMISIPRMETQAQEFGHSQVREFSFLVAHSILHLLGYDHMTPKEAAVMEAKQSQAL 157

Query: 160 EDLGIN 165
           E+L I 
Sbjct: 158 EELQIR 163


>gi|291533049|emb|CBL06162.1| conserved hypothetical protein TIGR00043 [Megamonas hypermegale
           ART12/1]
          Length = 159

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----MLGDIVLAYEI 110
            E+S+ FTD+  I  +N EYR +D+PT+V+SF                 MLGDI+++ E 
Sbjct: 43  AEVSITFTDNEHIHEINREYRKVDRPTDVISFALNEGDEPNIEGEIPVNMLGDIIISVEK 102

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +A   G      +  L +HG LHLLGYDH+++ D   M   E  ++E LGI+
Sbjct: 103 AIEQAGDYGHSIRREIAFLTVHGMLHLLGYDHIEEADRVEMRKEEDFVMEQLGIS 157


>gi|170017068|ref|YP_001727987.1| metal-dependent hydrolase [Leuconostoc citreum KM20]
 gi|238688965|sp|B1MYE1|RRMF_LEUCK RecName: Full=Probable rRNA maturation factor
 gi|169803925|gb|ACA82543.1| Predicted metal-dependent hydrolase [Leuconostoc citreum KM20]
          Length = 160

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 11/121 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDGCS---SLMLGDI 104
            E+S+ F ++  I+  N +YRG+DKPT+V+SF            S D  +   +  +GDI
Sbjct: 38  TEMSVTFVNNDEIQRYNRDYRGVDKPTDVISFAIEEGEDDFNIISDDAWTEDIAKNIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLG 163
           +++ +II  +A  LG  +E  L  L++HGFLHL GYDH+  D +   M  L+R IL++ G
Sbjct: 98  IVSVDIIGAQAEYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFDLQREILDNYG 157

Query: 164 I 164
           +
Sbjct: 158 L 158


>gi|91775004|ref|YP_544760.1| hypothetical protein Mfla_0649 [Methylobacillus flagellatus KT]
 gi|122400164|sp|Q1H3L8|RRMF_METFK RecName: Full=Probable rRNA maturation factor
 gi|91708991|gb|ABE48919.1| protein of unknown function UPF0054 [Methylobacillus flagellatus
           KT]
          Length = 149

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E +L   D      LN +YRG D  TNVL+FP            ++GDI+L   ++  E
Sbjct: 35  TEATLRIVDEEEGRMLNRDYRGKDYATNVLTFPLE------EEPWLVGDIILCAPVVARE 88

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A       E+H  HL +HG LH+ GYDH D+  A +ME +E   +  LG  DPY
Sbjct: 89  AAEQNITLESHYAHLTVHGILHMHGYDHEDEHQAELMESIESFTMIQLGYPDPY 142


>gi|15606551|ref|NP_213931.1| hypothetical protein aq_1354 [Aquifex aeolicus VF5]
 gi|6686198|sp|O67367|RRMF_AQUAE RecName: Full=Probable rRNA maturation factor
 gi|37927359|pdb|1OZ9|A Chain A, Crystal Structure Of Aq_1354, A Hypothetical Protein From
           Aquifex Aeolicus
 gi|2983779|gb|AAC07338.1| hypothetical protein aq_1354 [Aquifex aeolicus VF5]
          Length = 150

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           N VELS+  TD   I  LN  YR  DKPT+VLSFP      +     +LGD+V++ +  E
Sbjct: 39  NNVELSVYITDDQEIRELNKTYRKKDKPTDVLSFPMG---EEFGGYKILGDVVISQDTAE 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
            +A  LG   E  +  LI+HG +HLLGYDH
Sbjct: 96  RQARELGHSLEEEVKRLIVHGIVHLLGYDH 125


>gi|319409916|emb|CBY90241.1| putative metalloprotease NMB0538 [Neisseria meningitidis WUE 2594]
          Length = 251

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF      +  C  S  + GD+++  +++ 
Sbjct: 131 ADISLILLDEEEARDYNRDYRGKDYATNVLSFALNEGETLPCQVSEKLYGDLIICPQVVL 190

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 191 KEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFPNPYQED 249


>gi|237744342|ref|ZP_04574823.1| metal-binding protein [Fusobacterium sp. 7_1]
 gi|256027792|ref|ZP_05441626.1| metal-binding protein [Fusobacterium sp. D11]
 gi|289765747|ref|ZP_06525125.1| metal-binding protein [Fusobacterium sp. D11]
 gi|229431571|gb|EEO41783.1| metal-binding protein [Fusobacterium sp. 7_1]
 gi|289717302|gb|EFD81314.1| metal-binding protein [Fusobacterium sp. D11]
          Length = 163

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 5/116 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LSL+ TD+  I+ +N EYR  D PT+V+SF  A+  ++  +      LGDI+++ E +E 
Sbjct: 50  LSLLLTDNRNIQVINREYRDKDAPTDVISF--AYHETEDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +A+     FE    +++ HG LH+LGYDH++++D  +M   E +IL   G    Y+
Sbjct: 108 QASEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKIMREREEAILFSFGYTRDYK 163


>gi|237740707|ref|ZP_04571188.1| metal-binding protein [Fusobacterium sp. 2_1_31]
 gi|229422724|gb|EEO37771.1| metal-binding protein [Fusobacterium sp. 2_1_31]
          Length = 161

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LS++ TD+  I+ +N EYR  D PT+V+SF  A+  +D  +      LGDI+++ E +E 
Sbjct: 50  LSVLLTDNKNIQVINREYRDKDAPTDVISF--AYHETDDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +++     FE    +++ HG LH+LGYDH++++D  VM   E +IL   G
Sbjct: 108 QSSEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKVMREREEAILSSFG 157


>gi|16800570|ref|NP_470838.1| putative metalloprotease [Listeria innocua Clip11262]
 gi|26006924|sp|Q92BP5|RRMF_LISIN RecName: Full=Probable rRNA maturation factor
 gi|16413975|emb|CAC96733.1| lin1502 [Listeria innocua Clip11262]
 gi|313618896|gb|EFR90761.1| putative metalloprotease [Listeria innocua FSL S4-378]
 gi|313623746|gb|EFR93888.1| putative metalloprotease [Listeria innocua FSL J1-023]
          Length = 161

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 12/137 (8%)

Query: 40  VSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------- 89
           V N++  + GY   E   ELSL FT +  I+ +N EYR  D+ T+V+SF           
Sbjct: 23  VENILQFAAGYLKIEEGTELSLTFTTNEGIQEINREYRNKDQATDVISFALEEMGDGETE 82

Query: 90  --FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             +   D  +  MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +
Sbjct: 83  IDWGDFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDE 142

Query: 148 ACVMEGLERSILEDLGI 164
             VM GL++ +L+  G+
Sbjct: 143 EKVMFGLQKEVLDAYGL 159


>gi|228910137|ref|ZP_04073957.1| metalloprotease [Bacillus thuringiensis IBL 200]
 gi|228849654|gb|EEM94488.1| metalloprotease [Bacillus thuringiensis IBL 200]
          Length = 154

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E   E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 34  EGGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+ 
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLG 153


>gi|225567934|ref|ZP_03776959.1| hypothetical protein CLOHYLEM_04007 [Clostridium hylemonae DSM
           15053]
 gi|225163222|gb|EEG75841.1| hypothetical protein CLOHYLEM_04007 [Clostridium hylemonae DSM
           15053]
          Length = 167

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 15/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGC-----SSL 99
            +++L+ T + +I+ +N E+RGID+PT+VLSFP A              + C       L
Sbjct: 41  AQVNLLLTTNLQIQEMNEEFRGIDRPTDVLSFPMAEYEHPGDFGCLKEQEDCFDPESGEL 100

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDIV++ + +  +A   G   +     LI H  LHL GYDH+++K+   ME  +R IL
Sbjct: 101 LLGDIVISKDKVISQAEEFGHSLKREYAFLIAHSMLHLTGYDHMEEKERLDMEAKQREIL 160

Query: 160 EDLGI 164
             L I
Sbjct: 161 NRLNI 165


>gi|254671437|emb|CBA08953.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 251

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 6/138 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F +   + +  GY       ++SL+  D       N +YRG D  TNVLSF      +  
Sbjct: 116 FYRWAWSALKSGY----RRADISLILLDEEAARAYNRDYRGKDYATNVLSFALNEGETLP 171

Query: 96  C--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A +ME 
Sbjct: 172 CQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEA 231

Query: 154 LERSILEDLGINDPYEVD 171
            E  ++   G  +PY  D
Sbjct: 232 EEIRLMRAAGYPNPYRED 249


>gi|227878695|ref|ZP_03996609.1| metal-dependent hydrolase [Lactobacillus crispatus JV-V01]
 gi|256843289|ref|ZP_05548777.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256850354|ref|ZP_05555782.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262046498|ref|ZP_06019460.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US]
 gi|293380656|ref|ZP_06626707.1| metalloprotein, YbeY/ UPF0054family [Lactobacillus crispatus 214-1]
 gi|295693064|ref|YP_003601674.1| metalloprotease [Lactobacillus crispatus ST1]
 gi|312978180|ref|ZP_07789924.1| putative metalloprotease [Lactobacillus crispatus CTV-05]
 gi|227861710|gb|EEJ69315.1| metal-dependent hydrolase [Lactobacillus crispatus JV-V01]
 gi|256614709|gb|EEU19910.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256712751|gb|EEU27744.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260573369|gb|EEX29927.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US]
 gi|290922784|gb|EFD99735.1| metalloprotein, YbeY/ UPF0054family [Lactobacillus crispatus 214-1]
 gi|295031170|emb|CBL50649.1| Metalloprotease [Lactobacillus crispatus ST1]
 gi|310894898|gb|EFQ43968.1| putative metalloprotease [Lactobacillus crispatus CTV-05]
          Length = 174

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N +E+S+ F D  R   +N +YR  D+PT+V+SF    A  DG  S+ L 
Sbjct: 31  LLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRDKDRPTDVISF----AIEDGEDSIDLA 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I+  +   G  F+    + I+HGFLHL GYDH+   +A 
Sbjct: 87  AFADDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFGYTIVHGFLHLNGYDHIKPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LED G+
Sbjct: 147 EMFGIQGKVLEDYGL 161


>gi|325129682|gb|EGC52496.1| hypothetical protein TIGR00043 [Neisseria meningitidis OX99.30304]
          Length = 171

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +  GY       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKSGY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMRAAGFPNPYQED 169


>gi|160947548|ref|ZP_02094715.1| hypothetical protein PEPMIC_01483 [Parvimonas micra ATCC 33270]
 gi|158446682|gb|EDP23677.1| hypothetical protein PEPMIC_01483 [Parvimonas micra ATCC 33270]
          Length = 156

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           +E+S+ F  +  I+ +N  +R IDK T+VLSFP  F  S+     +LGDI+++ E    +
Sbjct: 40  IEVSVSFVTNEEIKNINSRFRNIDKETDVLSFPMDFEFSEEGMPFILGDIIISTEKSIEQ 99

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           A   G   +  +++L+ H   HLLGYDH+++ D  +M   E+  ++
Sbjct: 100 AQEFGHSIDREILYLVCHSVFHLLGYDHIEESDRIIMRNKEKETMK 145


>gi|237741714|ref|ZP_04572195.1| metal-binding protein [Fusobacterium sp. 4_1_13]
 gi|294785672|ref|ZP_06750960.1| metalloprotease [Fusobacterium sp. 3_1_27]
 gi|229429362|gb|EEO39574.1| metal-binding protein [Fusobacterium sp. 4_1_13]
 gi|294487386|gb|EFG34748.1| metalloprotease [Fusobacterium sp. 3_1_27]
          Length = 162

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LSL+ TD+  I+ +N EYR  D PT+V+SF  A+  ++  +      LGDI+++ E +E 
Sbjct: 50  LSLLLTDNENIQIINREYRDKDAPTDVISF--AYHETEDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +A      FE    +++ HG LH+LGYDH++++D  +M   E +IL   G
Sbjct: 108 QAGEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKIMRKREEAILSSFG 157


>gi|325127628|gb|EGC50544.1| hypothetical protein TIGR00043 [Neisseria meningitidis N1568]
          Length = 171

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +  GY       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKSGY----RRADISLILLDEEAARDYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
            +  C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  ETLPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY  D
Sbjct: 148 IMEAEEIRLMRAAGYPNPYRED 169


>gi|319400906|gb|EFV89125.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 155

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 8/122 (6%)

Query: 51  KENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLG 102
           KENI    ELS+ F D   I+ +N  YR  DK T+V+SF           +D     +LG
Sbjct: 31  KENIHNDAELSVTFVDKEEIQNINKVYRDKDKVTDVISFALEEDEPEIDFNDFEIPRVLG 90

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI++  ++ + +A   G  FE  L  L +HGFLHLLGYDH++D D   M G + +IL + 
Sbjct: 91  DIIICTDVAKEQAESYGHSFERELGFLALHGFLHLLGYDHMNDNDEKEMFGRQDAILNEF 150

Query: 163 GI 164
           G+
Sbjct: 151 GL 152


>gi|253577936|ref|ZP_04855208.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850254|gb|EES78212.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 164

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDG--------------CSSL 99
            +++LV TD+  IE +N E+R I +PT+VLSFP   F +  G                 L
Sbjct: 38  AQVNLVLTDNEEIERVNTEFRDIARPTDVLSFPMIPFETPAGYDIVEEDESYFDLDTDEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDI+++ + +  +A   G         L+ H  LHLLGYDH+   +A VME  +   L
Sbjct: 98  LLGDIMISVDKVFAQAEEYGHSVTREFCFLVAHSMLHLLGYDHMTPGEATVMEAKQAKAL 157

Query: 160 EDLGIN 165
           E+LGI 
Sbjct: 158 EELGIT 163


>gi|310643041|ref|YP_003947799.1| metalloprotease [Paenibacillus polymyxa SC2]
 gi|309247991|gb|ADO57558.1| Putative metalloprotease [Paenibacillus polymyxa SC2]
          Length = 165

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 16/124 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---------------PTAFASSDGCSSLM 100
           E++L F +  +I  LN +YRGID+PT+VLSF               PT     +    + 
Sbjct: 41  EVALTFVNDDQIHELNRDYRGIDRPTDVLSFAMKETLDEELEIIYEPTEDNPLNDVPDV- 99

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDI+++ +  + ++   G   E  +  L +HGFLHLLGYDH DD     M G + ++L 
Sbjct: 100 LGDIIISVQTAQAQSEEYGHSIEREIGFLFVHGFLHLLGYDHQDDASEAEMMGKQEAVLA 159

Query: 161 DLGI 164
            +G+
Sbjct: 160 QVGL 163


>gi|296157339|ref|ZP_06840175.1| protein of unknown function UPF0054 [Burkholderia sp. Ch1-1]
 gi|295892675|gb|EFG72457.1| protein of unknown function UPF0054 [Burkholderia sp. Ch1-1]
          Length = 153

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++ F D+    TLN  YRG D  TNVL+F  A+A S+     + GD++L   ++E EA
Sbjct: 44  ELTVRFVDAEEGRTLNRTYRGKDYSTNVLTF--AYAESE--DDPVTGDLILCCPVVEKEA 99

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              GK    H  HL++HG LH  GYDH  +++A  ME +E  IL  LG  DPY+
Sbjct: 100 AEQGKPLLAHYAHLLVHGTLHAQGYDHEAEEEAEEMEAIETEILGKLGFPDPYQ 153


>gi|167561618|ref|ZP_02354534.1| hypothetical protein BoklE_03576 [Burkholderia oklahomensis EO147]
          Length = 262

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDE+       +   K ++  +    F   +  + ++ F  +    
Sbjct: 113 PELDLAVQ-----YGDEVGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 164

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 165 ALNNSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 220

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY
Sbjct: 221 LLVHGALHAQGYDHERGDEDAAEMEALEIDILAKLGFPNPY 261


>gi|83589459|ref|YP_429468.1| hypothetical protein Moth_0595 [Moorella thermoacetica ATCC 39073]
 gi|123524940|sp|Q2RKW4|RRMF_MOOTA RecName: Full=Probable rRNA maturation factor
 gi|83572373|gb|ABC18925.1| Protein of unknown function UPF0054 [Moorella thermoacetica ATCC
           39073]
          Length = 156

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSDGCSSLMLGDIVLAYEII 111
           SL   D   I+ LN  YRG+D PT+VLSF      P   A +D     +LGDI+++    
Sbjct: 42  SLTLVDDAAIKELNRTYRGVDAPTDVLSFALEEKGPDEPAYADPGGDKLLGDIIISVPTA 101

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             +A   G      L  L +HGFLHLLGYDH     A  ME  + +IL  +G+ 
Sbjct: 102 VRQAGEYGHSLARELAFLAVHGFLHLLGYDHDTAAGAADMEARQEAILAGVGLR 155


>gi|18311000|ref|NP_562934.1| putative metalloprotease [Clostridium perfringens str. 13]
 gi|26006929|sp|Q8XIU5|RRMF_CLOPE RecName: Full=Probable rRNA maturation factor
 gi|18145682|dbj|BAB81724.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 168

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 18/144 (12%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC- 96
           + V + + K   VKE+  E+SLVF D+  I  +N E RGIDK T+VLSFP      D   
Sbjct: 22  EEVISFVLKEEKVKED-CEVSLVFVDNEEIRGINNETRGIDKATDVLSFPMIDYPEDKVY 80

Query: 97  ----------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
                             L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGY
Sbjct: 81  KDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGY 140

Query: 141 DHVDDKDACVMEGLERSILEDLGI 164
           DH+++++   M G E  +L  L I
Sbjct: 141 DHMEEEEKARMRGREEELLGKLNI 164


>gi|167568853|ref|ZP_02361727.1| hypothetical protein BoklC_03336 [Burkholderia oklahomensis C6786]
          Length = 262

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDE+       +   K ++  +    F   +  + ++ F  +    
Sbjct: 113 PELDLAVQ-----YGDEVGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 164

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 165 ALNNSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 220

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY
Sbjct: 221 LLVHGALHAQGYDHERGDEDAAEMEALEIDILAKLGFPNPY 261


>gi|110801968|ref|YP_699299.1| putative metalloprotease [Clostridium perfringens SM101]
 gi|122956576|sp|Q0SRF8|RRMF_CLOPS RecName: Full=Probable rRNA maturation factor
 gi|110682469|gb|ABG85839.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           SM101]
          Length = 168

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 18/144 (12%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC- 96
           + V + + K   VKE+  E+SLVF D+  I  +N E RGIDK T+VLSFP      D   
Sbjct: 22  EEVISFVLKEEKVKED-CEVSLVFVDNEEIRGINNETRGIDKTTDVLSFPMIDYPEDKVY 80

Query: 97  ----------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
                             L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGY
Sbjct: 81  KDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGY 140

Query: 141 DHVDDKDACVMEGLERSILEDLGI 164
           DH+++++   M G E  +L  L I
Sbjct: 141 DHMEEEEKARMRGREEELLGKLNI 164


>gi|325478360|gb|EGC81475.1| translation metalloprotein YbeY [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 448

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 66/113 (58%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           E+  E+S+ F D   I  LN E+RG+D+PT+VLSFP           +MLGDIV+  ++ 
Sbjct: 33  EDNYEVSITFVDRKEIHKLNKEFRGVDRPTDVLSFPLDDEILIPNEDIMLGDIVICLDVA 92

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           + +A   G      +++L  H  LHLLGYDH+++ +   M   E+ ++++L +
Sbjct: 93  KDQAIEFGHSLRREVMYLTCHSTLHLLGYDHMEEDEKREMRTREKEVMKNLRV 145


>gi|296327852|ref|ZP_06870388.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154986|gb|EFG95767.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 162

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LSL+ TD+  I+ +N EYR  D PT+V+SF  A+  ++  +      LGDI+++ E +E 
Sbjct: 50  LSLLLTDNENIQVINREYRDKDAPTDVISF--AYHETEDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +A+     FE    +++ HG LH+LGYDH++++D  +M   E +IL   G
Sbjct: 108 QASEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKLMREREEAILSSFG 157


>gi|254796633|ref|YP_003081469.1| hypothetical protein NRI_0240 [Neorickettsia risticii str.
           Illinois]
 gi|254589870|gb|ACT69232.1| conserved hypothetical protein [Neorickettsia risticii str.
           Illinois]
          Length = 143

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 3/97 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E S+V TD   I TLN  YRG D PTNVLSF     +++     ++G+++L+++ + IE
Sbjct: 35  AEFSVVLTDDEFIRTLNKNYRGKDAPTNVLSFN---YTNEQIGIGIIGEVILSFDRLVIE 91

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           A     +FE+HL+H+ IHG LH+LGYDH  DK+   M
Sbjct: 92  ALENEIKFEDHLLHMFIHGVLHVLGYDHSSDKETLAM 128


>gi|295677635|ref|YP_003606159.1| protein of unknown function UPF0054 [Burkholderia sp. CCGE1002]
 gi|295437478|gb|ADG16648.1| protein of unknown function UPF0054 [Burkholderia sp. CCGE1002]
          Length = 153

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++ F D+    TLN  YRG D  TNVL+F  A+A S+     + GD++L   ++E EA
Sbjct: 44  ELTVRFVDAEEGRTLNRTYRGKDYATNVLTF--AYAESE--DDPVTGDLILCCPVVEKEA 99

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              GK    H  HL++HG LH  GYDH  +++A  ME +E  IL  LG  DPY+
Sbjct: 100 AEQGKPLAAHYAHLLVHGTLHAQGYDHEVEEEAEEMEAIETEILARLGFPDPYQ 153


>gi|65321675|ref|ZP_00394634.1| COG0319: Predicted metal-dependent hydrolase [Bacillus anthracis
           str. A2012]
          Length = 156

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++  LE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEXLEAFGLG 155


>gi|289578131|ref|YP_003476758.1| hypothetical protein Thit_0920 [Thermoanaerobacter italicus Ab9]
 gi|289527844|gb|ADD02196.1| protein of unknown function UPF0054 [Thermoanaerobacter italicus
           Ab9]
          Length = 159

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASS-------DGCSSLM--LGDI 104
           VE+S+ F D+  I  LN  YRGIDKPT+VLSFP A F  +       D  S  +  +GDI
Sbjct: 38  VEVSVSFVDNEEIRKLNKYYRGIDKPTDVLSFPLAEFEETYDKIEKIDQESEEVQPIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           V++ E    ++   G  FE  + +L  H  LHLLGYDH  +++  +M   E  I+  L I
Sbjct: 98  VISLEKALEQSMEYGHSFEREVAYLTAHSMLHLLGYDHQTEEERKIMRQKEEEIMARLNI 157

Query: 165 N 165
            
Sbjct: 158 R 158


>gi|312113952|ref|YP_004011548.1| hypothetical protein Rvan_1179 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219081|gb|ADP70449.1| protein of unknown function UPF0054 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 193

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 8/165 (4%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           R+   I++E+  W   + +  L E +  K V+  + +     E+   +S+      ++ +
Sbjct: 26  RIGTDISIEDDRW---VSVDGL-EDLIPKLVAETLREAGLTPEDAC-VSVALMSGEQVRS 80

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGC---SSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN  +R  D  TNVLSFP+  A+           LGD+ L+Y+ +  EA    K    H 
Sbjct: 81  LNKVFRSKDADTNVLSFPSPEAARSAVLEDEPAFLGDVALSYDAVVGEAQAQAKTPLQHT 140

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            HL+ HG LHL+G+DH  D DA  ME  ER IL   GI DPY  D
Sbjct: 141 AHLVAHGVLHLVGFDHEADADADAMEAAERVILARFGIPDPYRDD 185


>gi|167835504|ref|ZP_02462387.1| hypothetical protein Bpse38_03366 [Burkholderia thailandensis
           MSMB43]
          Length = 268

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 119 PELDLAV-----QYGDEIGDAQRKPLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 170

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   I+E EA   GK    H  H
Sbjct: 171 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPIVEKEAREQGKTLVAHYAH 226

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 227 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 267


>gi|323527297|ref|YP_004229450.1| hypothetical protein BC1001_2976 [Burkholderia sp. CCGE1001]
 gi|323384299|gb|ADX56390.1| protein of unknown function UPF0054 [Burkholderia sp. CCGE1001]
          Length = 153

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 7/135 (5%)

Query: 38  KAVSNLISKGYFVKENIV---ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           KA+    + G ++K  +    EL++ F D+    TLN  YRG D  TNVL+F  A+A S+
Sbjct: 23  KALLPRATVGGWIKAALFADGELTVRFVDAEEGRTLNRTYRGKDYSTNVLTF--AYAESE 80

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                + GD++L   ++E EA   GK    H  HL++HG LH  GYDH  +++A  ME L
Sbjct: 81  --DDPVTGDLILCCPVVEKEAAEQGKPLVAHYAHLLVHGTLHAQGYDHEVEEEAEEMEAL 138

Query: 155 ERSILEDLGINDPYE 169
           E  IL  LG  DPY 
Sbjct: 139 ETEILGKLGFPDPYR 153


>gi|312127664|ref|YP_003992538.1| hypothetical protein Calhy_1452 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777683|gb|ADQ07169.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 158

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S++  D++ I+ LN 
Sbjct: 1   MKIFIQN--QQDKVDVDQHISKIIEESIVNTIK--VFLEEENFEISVLIVDNNFIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC---------SSLMLGDIVLAYEIIEIEANVLGKEFE 123
            YR ++K T+VLSFP  F   +G            + LGDIV++ E    +A   G   E
Sbjct: 57  NYRNVNKETDVLSFPI-FEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAKEFGHSLE 115

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+
Sbjct: 116 REVAYLTVHSVLHLLGFDHIEEDDRKVMRKYEEQILDSMGL 156


>gi|237810909|ref|YP_002895360.1| putative conserved hypothetical protein [Burkholderia pseudomallei
           MSHR346]
 gi|237506403|gb|ACQ98721.1| putative conserved hypothetical protein [Burkholderia pseudomallei
           MSHR346]
          Length = 274

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 125 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 176

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 177 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 232

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 233 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 273


>gi|15613926|ref|NP_242229.1| hypothetical protein BH1363 [Bacillus halodurans C-125]
 gi|20140844|sp|Q9KD56|RRMF_BACHD RecName: Full=Probable rRNA maturation factor
 gi|10173979|dbj|BAB05082.1| BH1363 [Bacillus halodurans C-125]
          Length = 159

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 7/123 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLG 102
           + E   ELSL F     I+ LN +YRG D+PT+V+SF              +  +  +LG
Sbjct: 35  LAEGTYELSLSFVSDEEIQELNRDYRGKDQPTDVISFALNEVGEGEQPVEPEAGTPNLLG 94

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI+++    + +A   G  FE  L  LI+HGFLHLLGYDH+ + +   M   +  IL   
Sbjct: 95  DIIVSIPRCQEQAEAYGHSFERELAFLIVHGFLHLLGYDHMSEDEEKKMFMRQEDILTAY 154

Query: 163 GIN 165
           G+ 
Sbjct: 155 GLT 157


>gi|315282362|ref|ZP_07870789.1| putative metalloprotease [Listeria marthii FSL S4-120]
 gi|313613994|gb|EFR87711.1| putative metalloprotease [Listeria marthii FSL S4-120]
          Length = 161

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 12/138 (8%)

Query: 40  VSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------- 89
           V N++  + GY   E   ELSL FT +  I  +N EYR  D+ T+V+SF           
Sbjct: 23  VENILQFAAGYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETE 82

Query: 90  --FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             +   D  +  MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +
Sbjct: 83  IDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDE 142

Query: 148 ACVMEGLERSILEDLGIN 165
             VM GL++ +L+  G+ 
Sbjct: 143 EKVMFGLQKEVLDAYGLE 160


>gi|222529265|ref|YP_002573147.1| hypothetical protein Athe_1274 [Caldicellulosiruptor bescii DSM
           6725]
 gi|254800021|sp|B9MRS0|RRMF_ANATD RecName: Full=Probable rRNA maturation factor
 gi|222456112|gb|ACM60374.1| protein of unknown function UPF0054 [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 158

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 14/161 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S++  D+  I+ LN 
Sbjct: 1   MKIFIQN--QQDKVDIDQHISKIIEESIVNTIK--VFLEEENFEISVLIVDNSFIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC---------SSLMLGDIVLAYEIIEIEANVLGKEFE 123
            YR ++K T+VLSFP  F   +G            + LGDIV++ E    +A   G   E
Sbjct: 57  NYRNVNKETDVLSFPI-FEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAKEFGHSLE 115

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+
Sbjct: 116 REIAYLTVHSVLHLLGFDHIEEDDRKVMREYEEQILQSMGL 156


>gi|126219079|gb|ABN82585.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           668]
          Length = 274

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 125 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 176

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 177 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 232

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 233 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 273


>gi|325956929|ref|YP_004292341.1| metalloprotease [Lactobacillus acidophilus 30SC]
 gi|325333494|gb|ADZ07402.1| Metalloprotease [Lactobacillus acidophilus 30SC]
 gi|327183709|gb|AEA32156.1| metalloprotease [Lactobacillus amylovorus GRL 1118]
          Length = 174

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N +E+S+ F D  R   +N +YR  D+PT+V+SF    A  DG  S+ L 
Sbjct: 31  LLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRDKDRPTDVISF----AIEDGEDSIDLA 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I+  +   G  F+    + ++HGFLHL GYDH+   +A 
Sbjct: 87  AFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFGYTVVHGFLHLNGYDHIKPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LED G+
Sbjct: 147 EMFGIQGKVLEDYGL 161


>gi|170693392|ref|ZP_02884551.1| protein of unknown function UPF0054 [Burkholderia graminis C4D1M]
 gi|170141547|gb|EDT09716.1| protein of unknown function UPF0054 [Burkholderia graminis C4D1M]
          Length = 153

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 4/114 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++ F D+    TLN  YRG D  TNVL+F  A+A S+     + GD++L   ++E EA
Sbjct: 44  ELTVRFVDAEEGRTLNRTYRGKDYSTNVLTF--AYAESE--DDPVTGDLILCCPVVEKEA 99

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              GK    H  HL++HG LH  GYDH  +++A  ME LE  IL  LG  DPY 
Sbjct: 100 AEQGKPLVAHYAHLLVHGTLHAQGYDHEVEEEAEEMEALETEILGKLGFPDPYR 153


>gi|167822819|ref|ZP_02454290.1| hypothetical protein Bpseu9_04036 [Burkholderia pseudomallei 9]
          Length = 273

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 124 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDTQFTVRFVGADEGR 175

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 176 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 231

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 232 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 272


>gi|160939164|ref|ZP_02086515.1| hypothetical protein CLOBOL_04058 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438127|gb|EDP15887.1| hypothetical protein CLOBOL_04058 [Clostridium bolteae ATCC
           BAA-613]
          Length = 165

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 16/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++++ TD+  I+ +N E+R ID PT+VLSFP     S                     
Sbjct: 38  AEVNVILTDNDAIQEINREHRQIDAPTDVLSFPMVDYESPSDFDHVEEAVEDYFNPETGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           LMLGDIV++ + +E +A   G      L  L  H  LHL GYDH++D +  VME  ++ I
Sbjct: 98  LMLGDIVISVDKVEEQAEKYGHSQTRELAFLTAHSMLHLFGYDHMEDGERLVMEEKQKEI 157

Query: 159 LEDLG 163
           LE  G
Sbjct: 158 LETRG 162


>gi|39939110|ref|NP_950876.1| hypothetical protein PAM_624 [Onion yellows phytoplasma OY-M]
 gi|59799050|sp|Q6YPV1|RRMF_ONYPE RecName: Full=Probable rRNA maturation factor
 gi|39722219|dbj|BAD04709.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M]
          Length = 146

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 61/109 (55%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + L+F  + +I+ LN  YR  + PT+VLSFP       G     LGD+ +++   +++A 
Sbjct: 33  MHLIFVTNEKIQELNSFYRQKNYPTDVLSFPNDLTFFAGLEDNSLGDVFISFSKAQVQAQ 92

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                 E  +  L +HGFLHL GY H  +++  +M  L+  IL+++G+N
Sbjct: 93  TAKHSLEREIAFLAVHGFLHLKGYQHRTEEEFQIMLALQEKILQNVGLN 141


>gi|167718180|ref|ZP_02401416.1| hypothetical protein BpseD_04113 [Burkholderia pseudomallei DM98]
 gi|167901393|ref|ZP_02488598.1| hypothetical protein BpseN_03886 [Burkholderia pseudomallei NCTC
           13177]
          Length = 273

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 124 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 175

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 176 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 231

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 232 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 272


>gi|228993242|ref|YP_001057758.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           pseudomallei 668]
          Length = 273

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 124 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 175

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 176 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 231

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 232 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 272


>gi|261378228|ref|ZP_05982801.1| putative metalloprotease [Neisseria cinerea ATCC 14685]
 gi|269145304|gb|EEZ71722.1| putative metalloprotease [Neisseria cinerea ATCC 14685]
          Length = 171

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 77/152 (50%), Gaps = 23/152 (15%)

Query: 37  AKAVSNLISKGYFVK---------ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF- 86
           A + +NL SK  F +             ++SL+  D       N +YRG D  TNVLSF 
Sbjct: 24  ASSAANLPSKRDFYRWAWSALKDEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFA 83

Query: 87  -------PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
                  P  F  SDG    + GD+V+  +++  EA   GK  E H  HL IHG LHL+G
Sbjct: 84  LNEGEILPDQF--SDG----LYGDLVICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMG 137

Query: 140 YDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           YDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 138 YDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 169


>gi|326318913|ref|YP_004236585.1| hypothetical protein Acav_4129 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375749|gb|ADX48018.1| protein of unknown function UPF0054 [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 152

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+   + LN EYR  D  TNVL+F  A         +++ D+VL   ++E E
Sbjct: 42  AEITVRIVDAEEGQALNREYRHKDYATNVLTFDYA------QEPVVMADLVLCAPVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  HL++HG LH  G+DH    +DA  ME  E +I+++LG  DPY
Sbjct: 96  AREQNKALHEHYAHLLVHGTLHAQGWDHETSAEDADEMEAYETAIMQELGFADPY 150


>gi|316985396|gb|EFV64344.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 209

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 91  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 150

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 151 KEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFPNPYQED 209


>gi|313903261|ref|ZP_07836653.1| protein of unknown function UPF0054 [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466349|gb|EFR61871.1| protein of unknown function UPF0054 [Thermaerobacter subterraneus
           DSM 13965]
          Length = 177

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 15/128 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---------------AFASSDGCSSL 99
           VE+SL F D   I+ LN  YRG D PT+VLSFP                    + G   +
Sbjct: 50  VEISLTFVDDVAIQELNRRYRGKDAPTDVLSFPQLEPDEVAALVRAPAVPAQVAPGPEPV 109

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LGD+V++ E    +A   G   +  + +L+ HG LHLLGYDH D +    M     + L
Sbjct: 110 PLGDVVISLERAAAQARDYGHSLDREVGYLLAHGVLHLLGYDHPDAERERRMHEKAEAAL 169

Query: 160 EDLGINDP 167
            D G++ P
Sbjct: 170 ADCGLSRP 177


>gi|303232221|ref|ZP_07318920.1| translation metalloprotein YbeY [Atopobium vaginae PB189-T1-4]
 gi|302481631|gb|EFL44692.1| translation metalloprotein YbeY [Atopobium vaginae PB189-T1-4]
          Length = 208

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 11/117 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDGCSSLMLGDIVLAY 108
           + +S+V  D   I  +N E+RG DKPT+V+S         + A+ + C    LGDI+LA 
Sbjct: 81  ISISIVTID--HIHDINREFRGQDKPTDVISIECERPDDPSLAAGEPCE---LGDIILAS 135

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           E I  +A+  G + ++    L+IH  LHLLGYDH++D DA VME LE  +L ++G  
Sbjct: 136 EYIAHQADDFGMDHQDECRLLLIHAMLHLLGYDHLNDADAEVMEALEDRLLIEVGTT 192


>gi|264680424|ref|YP_003280334.1| metal-dependent hydrolase [Comamonas testosteroni CNB-2]
 gi|262210940|gb|ACY35038.1| putative metal-dependent hydrolase [Comamonas testosteroni CNB-2]
          Length = 152

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+     LN EYR  D  TNVL+F      +      ++ D+VL   ++E E
Sbjct: 42  AEITVRIVDAEEGRKLNREYRKKDYATNVLTFDYQQEPT------VMADLVLCAPVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K  E H  HL++HG LH  G+DH   ++DA  ME  E  I++++G  DPY
Sbjct: 96  AQEQNKSLEEHYAHLLVHGTLHAQGWDHETSEEDAEEMEAYETDIMKEMGYEDPY 150


>gi|226196767|ref|ZP_03792347.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           Pakistan 9]
 gi|225931298|gb|EEH27305.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           Pakistan 9]
          Length = 274

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 125 PELDLAVQ-----YGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDTQFTVRFVGADEGR 176

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 177 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 232

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 233 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 273


>gi|148657696|ref|YP_001277901.1| hypothetical protein RoseRS_3596 [Roseiflexus sp. RS-1]
 gi|172048089|sp|A5UZ98|RRMF_ROSS1 RecName: Full=Probable rRNA maturation factor
 gi|148569806|gb|ABQ91951.1| protein of unknown function UPF0054 [Roseiflexus sp. RS-1]
          Length = 160

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 9/118 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAY 108
           VE+ ++ TD   ++ LN  YRG+D PT+VLSF  A A  D        +   LGDI +++
Sbjct: 42  VEVGILITDDAGLQRLNQAYRGVDAPTDVLSF--AEADDDSAFVRPPDAPRYLGDIAISW 99

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGIN 165
           E +  +A   G   E  L  L++HG LHLLGYDH     D   M   E  IL  LG++
Sbjct: 100 ERVVAQAAEYGHSRERELAFLVVHGMLHLLGYDHERSPADEADMRAREEEILRALGLS 157


>gi|139439607|ref|ZP_01773020.1| Hypothetical protein COLAER_02047 [Collinsella aerofaciens ATCC
           25986]
 gi|133774948|gb|EBA38768.1| Hypothetical protein COLAER_02047 [Collinsella aerofaciens ATCC
           25986]
          Length = 121

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 3/98 (3%)

Query: 70  LNFEYRGIDKPTNVLSFP--TAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN E+RGID+ T+VLSF   +AF        +L LGDI+LA ++I  +A   G    +  
Sbjct: 4   LNHEWRGIDRTTDVLSFECDSAFDEDIPADETLELGDIILAPQVIARQAPGFGNSPADEC 63

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +++HG LHLLGYDH++D +A VME  E +IL DL +
Sbjct: 64  RLMLVHGMLHLLGYDHIEDDEAEVMEAREDAILRDLAL 101


>gi|53724679|ref|YP_102057.1| unkown domain/metalloprotease fusion protein [Burkholderia mallei
           ATCC 23344]
 gi|228969302|ref|YP_332300.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           pseudomallei 1710b]
 gi|229008326|ref|YP_994019.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           mallei SAVP1]
 gi|229027669|ref|YP_001081961.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           mallei NCTC 10247]
 gi|229780993|ref|YP_001028317.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           mallei NCTC 10229]
 gi|254208717|ref|ZP_04915065.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei JHU]
 gi|52428102|gb|AAU48695.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei ATCC
           23344]
 gi|147750593|gb|EDK57662.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei JHU]
          Length = 270

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 121 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDTQFTVRFVGADEGR 172

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 173 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 228

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 229 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 269


>gi|307730934|ref|YP_003908158.1| hypothetical protein BC1003_2914 [Burkholderia sp. CCGE1003]
 gi|307585469|gb|ADN58867.1| protein of unknown function UPF0054 [Burkholderia sp. CCGE1003]
          Length = 153

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 4/114 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++ F D+    TLN  YRG D  TNVL+F  A+A S+     + GD++L   ++E EA
Sbjct: 44  ELTVRFVDAEEGRTLNRTYRGKDYSTNVLTF--AYAESE--DDPVTGDLILCCPVVEKEA 99

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              GK    H  HL++HG LH  GYDH  +++A  ME LE  IL  LG  DPY 
Sbjct: 100 AEQGKPLVAHYAHLLVHGTLHAQGYDHEAEEEAEEMEALETEILGKLGFADPYR 153


>gi|332527513|ref|ZP_08403565.1| hypothetical protein RBXJA2T_16287 [Rubrivivax benzoatilyticus JA2]
 gi|332111920|gb|EGJ11898.1| hypothetical protein RBXJA2T_16287 [Rubrivivax benzoatilyticus JA2]
          Length = 147

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +++   D     TLN +YRG D  TNVL+F             ++ D+VL   ++E EA 
Sbjct: 39  IAVRIVDEDEGRTLNRDYRGKDYATNVLTFDYEHEPE------VVADLVLCAPVVEREAA 92

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             G   E H  HL++HG LH  G+DH DD +A  ME  E  +L  LG  DPY
Sbjct: 93  EQGVTLEAHYAHLLVHGTLHAQGWDHEDDGEAEAMEARETELLAALGFADPY 144


>gi|167814343|ref|ZP_02446023.1| hypothetical protein Bpse9_04323 [Burkholderia pseudomallei 91]
 gi|167844394|ref|ZP_02469902.1| hypothetical protein BpseB_03824 [Burkholderia pseudomallei B7210]
 gi|167892907|ref|ZP_02480309.1| hypothetical protein Bpse7_04011 [Burkholderia pseudomallei 7894]
 gi|167909622|ref|ZP_02496713.1| hypothetical protein Bpse112_03959 [Burkholderia pseudomallei 112]
 gi|167917637|ref|ZP_02504728.1| hypothetical protein BpseBC_03726 [Burkholderia pseudomallei
           BCC215]
 gi|229269498|ref|YP_107301.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           pseudomallei K96243]
 gi|229335614|ref|YP_001065003.2| putative metalloprotease [Burkholderia pseudomallei 1106a]
 gi|254187673|ref|ZP_04894185.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196964|ref|ZP_04903388.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           S13]
 gi|254296215|ref|ZP_04963672.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           406e]
 gi|157806091|gb|EDO83261.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           406e]
 gi|157935353|gb|EDO91023.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169653707|gb|EDS86400.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           S13]
          Length = 270

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 121 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 172

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 173 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 228

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 229 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 269


>gi|217420118|ref|ZP_03451624.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           576]
 gi|242316823|ref|ZP_04815839.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1106b]
 gi|52208729|emb|CAH34665.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|126226010|gb|ABN89550.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1106a]
 gi|217397422|gb|EEC37438.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           576]
 gi|242140062|gb|EES26464.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1106b]
          Length = 271

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 122 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 173

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 174 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 229

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 230 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 270


>gi|121534218|ref|ZP_01666043.1| protein of unknown function UPF0054 [Thermosinus carboxydivorans
           Nor1]
 gi|121307321|gb|EAX48238.1| protein of unknown function UPF0054 [Thermosinus carboxydivorans
           Nor1]
          Length = 155

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-- 96
           AV N  ++ Y + E   E+S+V  D   I  LN +YR  D PT+VLSF            
Sbjct: 24  AVLNKAAEVYGLSEQ-TEVSIVLVDDEYIFELNRQYRDKDVPTDVLSFALNEGDEPAIIN 82

Query: 97  --SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
             ++++LGDIV++ E    +A   G   E  L +L +HG LHLLGYDH  +++   M   
Sbjct: 83  DPAAMLLGDIVISLETAARQAEEFGHGLERELAYLTLHGMLHLLGYDHETEEERVKMRNE 142

Query: 155 ERSILEDLGIN 165
           E  IL  LGI 
Sbjct: 143 EEYILSQLGIT 153


>gi|88608284|ref|YP_506143.1| hypothetical protein NSE_0249 [Neorickettsia sennetsu str.
           Miyayama]
 gi|123492190|sp|Q2GEF3|RRMF_NEOSM RecName: Full=Probable rRNA maturation factor
 gi|88600453|gb|ABD45921.1| conserved hypothetical protein TIGR00043 [Neorickettsia sennetsu
           str. Miyayama]
          Length = 143

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 3/97 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E S+V TD   I TLN  YRG D PTNVLSF     +++     ++G+++L+++ + IE
Sbjct: 35  AEFSVVLTDDEFIRTLNKSYRGRDTPTNVLSFN---YTNEQIGIGIIGEVILSFDRLVIE 91

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           A     +FE+HL+H+ IHG LH+LGYDH  D++   M
Sbjct: 92  ALENEIKFEDHLLHMFIHGVLHVLGYDHSSDRETLAM 128


>gi|238562536|ref|ZP_00440243.2| putative conserved hypothetical protein [Burkholderia mallei GB8
           horse 4]
 gi|251767812|ref|ZP_02268483.2| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           PRL-20]
 gi|254177000|ref|ZP_04883657.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei ATCC
           10399]
 gi|254203741|ref|ZP_04910101.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei FMH]
 gi|254260739|ref|ZP_04951793.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1710a]
 gi|254360231|ref|ZP_04976501.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           2002721280]
 gi|76578267|gb|ABA47742.1| conserved hypothetical protein TIGR00043, putative [Burkholderia
           pseudomallei 1710b]
 gi|121228785|gb|ABM51303.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           SAVP1]
 gi|124294661|gb|ABN03930.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei NCTC
           10229]
 gi|126243959|gb|ABO07052.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei NCTC
           10247]
 gi|147745253|gb|EDK52333.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei FMH]
 gi|148029471|gb|EDK87376.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           2002721280]
 gi|160698041|gb|EDP88011.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei ATCC
           10399]
 gi|238522405|gb|EEP85849.1| putative conserved hypothetical protein [Burkholderia mallei GB8
           horse 4]
 gi|243061633|gb|EES43819.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           PRL-20]
 gi|254219428|gb|EET08812.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1710a]
          Length = 271

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 122 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDTQFTVRFVGADEGR 173

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 174 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 229

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 230 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 270


>gi|323440468|gb|EGA98180.1| hypothetical protein SAO11_0764 [Staphylococcus aureus O11]
 gi|323443242|gb|EGB00860.1| hypothetical protein SAO46_0891 [Staphylococcus aureus O46]
          Length = 155

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 5/119 (4%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-GCSSL----MLGDIVL 106
           E+  ELS+ F D   I+ +N  YR  DK T+V+SF       D   S L    +LGDI++
Sbjct: 35  EDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPDIDYSDLDIPRVLGDIII 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             ++ + +AN  G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL   G+ 
Sbjct: 95  CTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGLT 153


>gi|168204743|ref|ZP_02630748.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens E
           str. JGS1987]
 gi|170663561|gb|EDT16244.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens E
           str. JGS1987]
          Length = 168

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 18/145 (12%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC- 96
           + V + + K   VKE+  E+SLVF D+  I  +N E RGID+ T+VLSFP      D   
Sbjct: 22  EEVISFVLKEEKVKED-CEVSLVFVDNEEIRGINSETRGIDRATDVLSFPMIDYPEDKVY 80

Query: 97  ----------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
                             L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGY
Sbjct: 81  KDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGY 140

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH+++++   M G E  +L  L I 
Sbjct: 141 DHMEEEEKARMRGREEELLGKLNIT 165


>gi|15676444|ref|NP_273583.1| hypothetical protein NMB0538 [Neisseria meningitidis MC58]
 gi|26006912|sp|Q9K0P7|RRMF_NEIMB RecName: Full=Probable rRNA maturation factor
 gi|7225763|gb|AAF40967.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|325139809|gb|EGC62342.1| putative metalloprotease [Neisseria meningitidis CU385]
 gi|325200774|gb|ADY96229.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           H44/76]
          Length = 169

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 111 KEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFPNPYQED 169


>gi|302871925|ref|YP_003840561.1| hypothetical protein COB47_1283 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574784|gb|ADL42575.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 158

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 10/125 (8%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC---------SSL 99
           F++E   E+S++  D++ I+ LN  YR ++K T+VLSFP  F   +G            +
Sbjct: 33  FLQEENFEVSVLIVDNNFIKELNRNYRNVNKETDVLSFPI-FEFKNGQLQEDIVVVEDEI 91

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LGDIV++ E    +A   G   E  + +L +H  LHLLG+DH+++ D  VM   E  IL
Sbjct: 92  PLGDIVISIEKALQQAKEFGHSLEREVAYLTVHSVLHLLGFDHIEEDDRKVMRKYEEQIL 151

Query: 160 EDLGI 164
           + +G+
Sbjct: 152 DSMGL 156


>gi|293607163|ref|ZP_06689505.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292814497|gb|EFF73636.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 160

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 4/116 (3%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           +  ELSL    +     LN ++R  D  TNVL+F      +     +  GDIV+   ++ 
Sbjct: 43  SAAELSLRLVGAAEGRRLNRDFRQRDYATNVLTFEYGVDPA----GVARGDIVMCVPVLV 98

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    K    H  HL IHG LH LGYDH+  +DA  M+ LE + L  +GI DPY
Sbjct: 99  REAREQRKPLLEHAAHLTIHGVLHSLGYDHIKARDAKRMDALETATLAQMGIADPY 154


>gi|56476161|ref|YP_157750.1| hypothetical protein ebA1336 [Aromatoleum aromaticum EbN1]
 gi|62901202|sp|Q5P762|RRMF_AROAE RecName: Full=Probable rRNA maturation factor
 gi|56312204|emb|CAI06849.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 154

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG D  TNVL+F   +  S+     + GD+VL   ++  EA   GK  E H  HL
Sbjct: 61  LNRDYRGKDYATNVLTF--VYDESE----RLAGDLVLCVPVVAREAAEQGKPLEAHFAHL 114

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I+HG LHL G+DH    +A  ME LE  +L  LG  +PY
Sbjct: 115 IVHGMLHLQGFDHEAPDEAEEMETLETRVLATLGYPNPY 153


>gi|310659081|ref|YP_003936802.1| yqfg [Clostridium sticklandii DSM 519]
 gi|308825859|emb|CBH21897.1| YqfG [Clostridium sticklandii]
          Length = 157

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 7/118 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLA 107
           VE+SL FT    I+ +N ++R IDK T+VLSFP       +   +S     + LGDIV++
Sbjct: 39  VEISLTFTTDELIKEINSKHRNIDKATDVLSFPMYEKQELSDINTSISNFPVALGDIVVS 98

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            E    +A   G  FE  +  L+ H   HLLGYDH+  ++  +M   +  +LE LGIN
Sbjct: 99  VERTFSQAEEYGHSFEREMAFLVCHSMFHLLGYDHMTKQEEGLMMEKQNKVLEALGIN 156


>gi|254671890|emb|CBA04156.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
 gi|308388724|gb|ADO31044.1| hypothetical protein NMBB_0581 [Neisseria meningitidis alpha710]
          Length = 251

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 131 ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 190

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 191 KEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFPNPYQED 249


>gi|268319371|ref|YP_003293027.1| hypothetical protein FI9785_888 [Lactobacillus johnsonii FI9785]
 gi|262397746|emb|CAX66760.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 175

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 13/155 (8%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + DE+      +  +   +SNL+  +K    KEN  E+S+ F  S +I  +N +YRG D+
Sbjct: 8   FNDEVTFLKDSDKDWISWISNLLLSAKKEIHKENAQEMSINFVSSEKIHEINKKYRGKDR 67

Query: 80  PTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           PT+V+SF           +AF S D      +GD+ L  E+I+  +      F     + 
Sbjct: 68  PTDVISFAIEDGLDEDFMSAF-SDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFGYT 126

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++HG+LHL GYDH++D +A +M G++  +L + G+
Sbjct: 127 LVHGYLHLNGYDHIEDDEAKIMFGIQGKVLREYGL 161


>gi|253997234|ref|YP_003049298.1| hypothetical protein Mmol_1868 [Methylotenera mobilis JLW8]
 gi|253983913|gb|ACT48771.1| protein of unknown function UPF0054 [Methylotenera mobilis JLW8]
          Length = 145

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 6/114 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+   ++LN  YRG D  TNVL+FP            ++GDI++   ++  E
Sbjct: 35  TEVTIRIVDAAEGQSLNNTYRGKDYATNVLTFPLTE------EPYLMGDIIICAPVVAAE 88

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K  E H  HL +HG LHL GYDH  +  A +MEGLE +I+  LG   PY
Sbjct: 89  AEAQHKSLEAHYAHLTVHGILHLHGYDHEIEAQAELMEGLETAIVTKLGYASPY 142


>gi|134279773|ref|ZP_01766485.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           305]
 gi|254181743|ref|ZP_04888340.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1655]
 gi|134248973|gb|EBA49055.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           305]
 gi|184212281|gb|EDU09324.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1655]
          Length = 271

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 122 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 173

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 174 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 229

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 230 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 270


>gi|332188741|ref|ZP_08390454.1| uncharacterized UPF0054 family protein [Sphingomonas sp. S17]
 gi|332011247|gb|EGI53339.1| uncharacterized UPF0054 family protein [Sphingomonas sp. S17]
          Length = 171

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 9/122 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVL 106
           +E+S+  T    +  LN +YR  DKPTNVLSFP        T   +SD    ++LGDIVL
Sbjct: 46  IEISVRLTSDDEVHALNRQYRQKDKPTNVLSFPMVQPDLIETVTQNSDD-GEVLLGDIVL 104

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
           A+ +   EA   G   E H  HL++HG LHLLGYDH+ D +A  ME +ER  L  LGI D
Sbjct: 105 AHGVCIAEAADRGISPETHATHLLVHGVLHLLGYDHMQDDEAEAMEAIERDALASLGIAD 164

Query: 167 PY 168
           PY
Sbjct: 165 PY 166


>gi|120612878|ref|YP_972556.1| hypothetical protein Aave_4242 [Acidovorax citrulli AAC00-1]
 gi|145558826|sp|A1TUZ4|RRMF_ACIAC RecName: Full=Probable rRNA maturation factor
 gi|120591342|gb|ABM34782.1| protein of unknown function UPF0054 [Acidovorax citrulli AAC00-1]
          Length = 152

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+   + LN EYR  D  TNVL+F  A         +++ D+VL   ++E E
Sbjct: 42  AEITVRIVDAEEGQALNREYRHKDYATNVLTFDYA------QEPVVMADLVLCAPVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  HL++HG LH  G+DH    +DA  ME  E +I+++LG  DPY
Sbjct: 96  AREQNKALHEHYAHLLVHGTLHAQGWDHETSAEDADEMEAYETAIMQELGFADPY 150


>gi|167037777|ref|YP_001665355.1| putative metalloprotease [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039983|ref|YP_001662968.1| putative metalloprotease [Thermoanaerobacter sp. X514]
 gi|256751971|ref|ZP_05492841.1| protein of unknown function UPF0054 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300914073|ref|ZP_07131389.1| protein of unknown function UPF0054 [Thermoanaerobacter sp. X561]
 gi|307724694|ref|YP_003904445.1| hypothetical protein Thet_1564 [Thermoanaerobacter sp. X513]
 gi|320116192|ref|YP_004186351.1| hypothetical protein Thebr_1395 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|238687637|sp|B0K706|RRMF_THEPX RecName: Full=Probable rRNA maturation factor
 gi|238687667|sp|B0KA56|RRMF_THEP3 RecName: Full=Probable rRNA maturation factor
 gi|166854223|gb|ABY92632.1| protein of unknown function UPF0054 [Thermoanaerobacter sp. X514]
 gi|166856611|gb|ABY95019.1| protein of unknown function UPF0054 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256749176|gb|EEU62210.1| protein of unknown function UPF0054 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300889008|gb|EFK84154.1| protein of unknown function UPF0054 [Thermoanaerobacter sp. X561]
 gi|307581755|gb|ADN55154.1| protein of unknown function UPF0054 [Thermoanaerobacter sp. X513]
 gi|319929283|gb|ADV79968.1| protein of unknown function UPF0054 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 159

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 10/120 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCSSLM---------LGDI 104
           VE+S+ F D+  I  LN  YRGIDKPT+VLSFP A F  + G    +         +GDI
Sbjct: 38  VEVSVSFVDNEEIRKLNKYYRGIDKPTDVLSFPLAEFEDTYGEVEEIEEDSEEVQPIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           V++ E    ++   G  FE  + +L  H  LHLLGYDH  +++  +M   E  ++  L I
Sbjct: 98  VISLEKALEQSMEYGHSFEREVAYLTAHSMLHLLGYDHETEEERKIMREKEEEVMARLNI 157


>gi|49483818|ref|YP_041042.1| hypothetical protein SAR1647 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82751173|ref|YP_416914.1| hypothetical protein SAB1442c [Staphylococcus aureus RF122]
 gi|257425695|ref|ZP_05602119.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428356|ref|ZP_05604754.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430993|ref|ZP_05607373.1| metalloprotease [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433681|ref|ZP_05610039.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436595|ref|ZP_05612639.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|258423998|ref|ZP_05686880.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|282904152|ref|ZP_06312040.1| putative metalloprotease [Staphylococcus aureus subsp. aureus C160]
 gi|282905979|ref|ZP_06313834.1| metalloprotease [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908889|ref|ZP_06316707.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911208|ref|ZP_06319010.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914377|ref|ZP_06322163.1| putative metalloprotease [Staphylococcus aureus subsp. aureus M899]
 gi|282916840|ref|ZP_06324598.1| metalloprotease [Staphylococcus aureus subsp. aureus D139]
 gi|282919346|ref|ZP_06327081.1| metalloprotease [Staphylococcus aureus subsp. aureus C427]
 gi|282924671|ref|ZP_06332339.1| metalloprotease [Staphylococcus aureus subsp. aureus C101]
 gi|283770646|ref|ZP_06343538.1| metalloprotease [Staphylococcus aureus subsp. aureus H19]
 gi|283958334|ref|ZP_06375785.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503451|ref|ZP_06667298.1| metalloprotease [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510468|ref|ZP_06669174.1| metalloprotease [Staphylococcus aureus subsp. aureus M809]
 gi|293531008|ref|ZP_06671690.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295428148|ref|ZP_06820780.1| metalloprotease [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590886|ref|ZP_06949524.1| hypothetical metal-binding protein [Staphylococcus aureus subsp.
           aureus MN8]
 gi|56749737|sp|Q6GGD0|RRMF_STAAR RecName: Full=Probable rRNA maturation factor
 gi|123547820|sp|Q2YT09|RRMF_STAAB RecName: Full=Probable rRNA maturation factor
 gi|49241947|emb|CAG40642.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82656704|emb|CAI81131.1| conserved hypothetical UPF0054 protein [Staphylococcus aureus
           RF122]
 gi|257271389|gb|EEV03535.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275197|gb|EEV06684.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278423|gb|EEV09059.1| metalloprotease [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281774|gb|EEV11911.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283946|gb|EEV14069.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257845619|gb|EEV69651.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|282313506|gb|EFB43901.1| metalloprotease [Staphylococcus aureus subsp. aureus C101]
 gi|282317156|gb|EFB47530.1| metalloprotease [Staphylococcus aureus subsp. aureus C427]
 gi|282319327|gb|EFB49679.1| metalloprotease [Staphylococcus aureus subsp. aureus D139]
 gi|282321558|gb|EFB51883.1| putative metalloprotease [Staphylococcus aureus subsp. aureus M899]
 gi|282324903|gb|EFB55213.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327153|gb|EFB57448.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331271|gb|EFB60785.1| metalloprotease [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595770|gb|EFC00734.1| putative metalloprotease [Staphylococcus aureus subsp. aureus C160]
 gi|283460793|gb|EFC07883.1| metalloprotease [Staphylococcus aureus subsp. aureus H19]
 gi|283470848|emb|CAQ50059.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283790483|gb|EFC29300.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920276|gb|EFD97342.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291095117|gb|EFE25382.1| metalloprotease [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466832|gb|EFF09352.1| metalloprotease [Staphylococcus aureus subsp. aureus M809]
 gi|295128506|gb|EFG58140.1| metalloprotease [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575772|gb|EFH94488.1| hypothetical metal-binding protein [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298694852|gb|ADI98074.1| conserved hypothetical UPF0054 protein [Staphylococcus aureus
           subsp. aureus ED133]
 gi|312437961|gb|ADQ77032.1| hypothetical metal-binding protein [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315195473|gb|EFU25860.1| hypothetical protein CGSSa00_07380 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 155

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 5/119 (4%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-GCSSL----MLGDIVL 106
           E+  ELS+ F D   I+ +N  YR  DK T+V+SF       D   S L    +LGDI++
Sbjct: 35  EDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPDIDFSGLDIPRVLGDIII 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             ++ + +AN  G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL   G+ 
Sbjct: 95  CTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGLT 153


>gi|228902826|ref|ZP_04066971.1| metalloprotease [Bacillus thuringiensis IBL 4222]
 gi|228967368|ref|ZP_04128403.1| metalloprotease [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228792403|gb|EEM39970.1| metalloprotease [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228856835|gb|EEN01350.1| metalloprotease [Bacillus thuringiensis IBL 4222]
          Length = 154

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 34  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ +++   M G ++ ILE  G+ 
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEEEKEMFGRQKEILEAFGLG 153


>gi|227892552|ref|ZP_04010357.1| metal-dependent hydrolase [Lactobacillus ultunensis DSM 16047]
 gi|227865673|gb|EEJ73094.1| metal-dependent hydrolase [Lactobacillus ultunensis DSM 16047]
          Length = 174

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K N +E+S+ F D  R   +N +YR  D+PT+V+SF    A  DG  S+ L 
Sbjct: 31  LLAKKEIGKTNNLEMSINFVDEDRSHEINLKYRDKDRPTDVISF----AIEDGEDSIDLA 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I+  +   G  F+    + ++HGFLHL GYDH+  ++A 
Sbjct: 87  AFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFGYTVVHGFLHLNGYDHIKPEEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LED G+
Sbjct: 147 EMFGIQGKVLEDYGL 161


>gi|110800128|ref|YP_696698.1| putative metalloprotease [Clostridium perfringens ATCC 13124]
 gi|168208720|ref|ZP_02634345.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens B
           str. ATCC 3626]
 gi|168212945|ref|ZP_02638570.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           CPE str. F4969]
 gi|182624386|ref|ZP_02952170.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens D
           str. JGS1721]
 gi|122958755|sp|Q0TNU2|RRMF_CLOP1 RecName: Full=Probable rRNA maturation factor
 gi|110674775|gb|ABG83762.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           ATCC 13124]
 gi|170713197|gb|EDT25379.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens B
           str. ATCC 3626]
 gi|170715613|gb|EDT27795.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           CPE str. F4969]
 gi|177910389|gb|EDT72766.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens D
           str. JGS1721]
          Length = 168

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 18/144 (12%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC- 96
           + V + + K   VKE+  E+SLVF D+  I  +N E RGID+ T+VLSFP      D   
Sbjct: 22  EEVISFVLKEEKVKED-CEVSLVFVDNEEIRGINNETRGIDRATDVLSFPMIDYPEDKVY 80

Query: 97  ----------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
                             L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGY
Sbjct: 81  KDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGY 140

Query: 141 DHVDDKDACVMEGLERSILEDLGI 164
           DH+++++   M G E  +L  L I
Sbjct: 141 DHMEEEEKARMRGREEELLGKLNI 164


>gi|169343547|ref|ZP_02864546.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens C
           str. JGS1495]
 gi|169298107|gb|EDS80197.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens C
           str. JGS1495]
          Length = 168

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 18/144 (12%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC- 96
           + V + + K   VKE+  E+SLVF D+  I  +N E RGID+ T+VLSFP      D   
Sbjct: 22  EEVISFVLKEEKVKED-CEVSLVFVDNEEIRGINNETRGIDRATDVLSFPMIDYPEDKVY 80

Query: 97  ----------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
                             L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGY
Sbjct: 81  KDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGY 140

Query: 141 DHVDDKDACVMEGLERSILEDLGI 164
           DH+++++   M G E  +L  L I
Sbjct: 141 DHMEEEEKARMRGREEELLGKLNI 164


>gi|299533016|ref|ZP_07046403.1| putative metal-dependent hydrolase [Comamonas testosteroni S44]
 gi|298719240|gb|EFI60210.1| putative metal-dependent hydrolase [Comamonas testosteroni S44]
          Length = 152

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 17/120 (14%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----PTAFASSDGCSSLMLGDIVLAYE 109
            E+++   D+     LN EYR  D  TNVL+F     PT  A           D+VL   
Sbjct: 42  AEITVRIVDTEEGRKLNREYRKKDYATNVLTFDYHQEPTVMA-----------DLVLCAP 90

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           ++E EA    K  E H  HL++HG LH  G+DH   ++DA  ME  E  I++++G  DPY
Sbjct: 91  VVEREAQEQNKSLEEHYAHLLVHGTLHAQGWDHETSEEDAEEMEAYETDIMKEMGYEDPY 150


>gi|168215645|ref|ZP_02641270.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           NCTC 8239]
 gi|182382067|gb|EDT79546.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           NCTC 8239]
          Length = 168

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 18/144 (12%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC- 96
           + V + + K   VKE+  E+SLVF D+  I  +N E RGID+ T+VLSFP      D   
Sbjct: 22  EEVISFVLKEEKVKED-CEVSLVFVDNEEIRGINNETRGIDRATDVLSFPMIDYPEDKVY 80

Query: 97  ----------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
                             L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGY
Sbjct: 81  KDVYLEHEFDKCYFDEDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGY 140

Query: 141 DHVDDKDACVMEGLERSILEDLGI 164
           DH+++++   M G E  +L  L I
Sbjct: 141 DHMEEEEKARMRGREEELLGKLNI 164


>gi|221064957|ref|ZP_03541062.1| protein of unknown function UPF0054 [Comamonas testosteroni KF-1]
 gi|220709980|gb|EED65348.1| protein of unknown function UPF0054 [Comamonas testosteroni KF-1]
          Length = 152

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+     LN EYR  D  TNVL+F      +      ++ D+VL   ++E E
Sbjct: 42  AEITVRIVDAEEGRKLNREYRQKDYATNVLTFDYQQEPT------VMADLVLCAPVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K  E H  HL++HG LH  G+DH   ++DA  ME  E  I++++G  DPY
Sbjct: 96  AQEQNKTLEEHYAHLLVHGTLHAQGWDHETSEEDAEEMEAYETDIMKEMGYEDPY 150


>gi|325141764|gb|EGC64216.1| hypothetical protein TIGR00043 [Neisseria meningitidis 961-5945]
 gi|325197750|gb|ADY93206.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           G2136]
          Length = 171

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 111 KEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFPNPYQED 169


>gi|168179379|ref|ZP_02614043.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum
           NCTC 2916]
 gi|182669701|gb|EDT81677.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum
           NCTC 2916]
          Length = 166

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 21/138 (15%)

Query: 48  YFVKENIV----ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------------- 88
           Y +KE  V    E+S+VF D++ I+ +N +YR IDK T+VLSFP                
Sbjct: 27  YALKEEKVNIDYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEKGEVFKDIYLN 86

Query: 89  -AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             F  SD    +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++ 
Sbjct: 87  YEFDESDLDEGNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEED 146

Query: 147 DACVMEGLERSILEDLGI 164
           +  +M   E  IL+   +
Sbjct: 147 EKVIMRQREEEILKSFNL 164


>gi|153938871|ref|YP_001392225.1| putative metalloprotease [Clostridium botulinum F str. Langeland]
 gi|170757065|ref|YP_001782581.1| putative metalloprotease [Clostridium botulinum B1 str. Okra]
 gi|166228940|sp|A7GHG5|RRMF_CLOBL RecName: Full=Probable rRNA maturation factor
 gi|229553944|sp|B1ILL2|RRMF_CLOBK RecName: Full=Probable rRNA maturation factor
 gi|152934767|gb|ABS40265.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum F
           str. Langeland]
 gi|169122277|gb|ACA46113.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum B1
           str. Okra]
 gi|295320223|gb|ADG00601.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum F
           str. 230613]
          Length = 166

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 21/138 (15%)

Query: 48  YFVKENIV----ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------------- 88
           Y +KE  V    E+S+VF D++ I+ +N +YR IDK T+VLSFP                
Sbjct: 27  YALKEEKVNIDYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEEGKVFKDIYLN 86

Query: 89  -AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             F  SD    +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++ 
Sbjct: 87  YEFDESDLDEGNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEED 146

Query: 147 DACVMEGLERSILEDLGI 164
           +  +M   E  IL+   +
Sbjct: 147 EKVIMRQREEEILKSFNL 164


>gi|75762398|ref|ZP_00742269.1| Hypothetical metal-binding protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218899469|ref|YP_002447880.1| hypothetical protein BCG9842_B0816 [Bacillus cereus G9842]
 gi|226708103|sp|B7IYF4|RRMF_BACC2 RecName: Full=Probable rRNA maturation factor
 gi|74490110|gb|EAO53455.1| Hypothetical metal-binding protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218542257|gb|ACK94651.1| conserved hypothetical protein TIGR00043 [Bacillus cereus G9842]
          Length = 156

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----GCS-SLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF             G     MLGD++
Sbjct: 36  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ +++   M G ++ ILE  G+ 
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEEEKEMFGRQKEILEAFGLG 155


>gi|238544550|dbj|BAH60902.1| hyphothetical protein [Desulfotignum balticum]
          Length = 140

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+V  D  +I+ LN  +RGID+PTNVLSFP         +  +LGD+V++ +    EA
Sbjct: 24  EISIVIMDDLQIKELNHSFRGIDRPTNVLSFPMQEGEFSDITPGLLGDVVISAQTAAREA 83

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVME 152
              G   +  +  L+IHG LHL+G+DH   K DA  ME
Sbjct: 84  QEAGITLDERMSQLLIHGILHLVGFDHETSKADADDME 121


>gi|229824784|ref|ZP_04450853.1| hypothetical protein GCWU000182_00133 [Abiotrophia defectiva ATCC
           49176]
 gi|229791113|gb|EEP27227.1| hypothetical protein GCWU000182_00133 [Abiotrophia defectiva ATCC
           49176]
          Length = 168

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
           +E++++ T +  I+  N  +R ID+PT+VLSFP    SS                     
Sbjct: 38  IEVNVLLTGNDEIQEANRNFRDIDRPTDVLSFPMVDYSSPSDFSTVNESPECYLNPETDE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDI+++ + +  +A   G   +     LI H  LHLLGYDH++D++  VME  + ++
Sbjct: 98  LVLGDIMISVDKVYEQAEEYGHSRKREFAFLIAHSMLHLLGYDHMEDEERVVMEAKQEAV 157

Query: 159 LEDLGI 164
           LE LGI
Sbjct: 158 LEALGI 163


>gi|332638285|ref|ZP_08417148.1| metal-dependent hydrolase [Weissella cibaria KACC 11862]
          Length = 160

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 13/123 (10%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+S+ F ++  I+  N EYRG+DKPT+V+SF       D    +M           +GD
Sbjct: 38  TEMSVTFVNNDEIQRYNREYRGLDKPTDVISFAIE-EDGDDMPLMMDEDMAEDLAKNIGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDL 162
           I+++ + I  +A  L   +E  L  L++HGFLHL GYDH+  D+D  +M  L+R IL+  
Sbjct: 97  IIVSVDKIGEQAEYLEHSYERELGFLVVHGFLHLNGYDHMRSDEDEKIMFDLQREILDSY 156

Query: 163 GIN 165
           G+ 
Sbjct: 157 GLT 159


>gi|308750998|gb|ADO44481.1| protein of unknown function UPF0054 [Hydrogenobacter thermophilus
           TK-6]
          Length = 144

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+S+  TD   I  LN +YRG D+PT+VLSFP      +    L+LGDIV++++  + +
Sbjct: 39  AEISIYITDDETIRHLNRDYRGKDEPTDVLSFPICEKVGNW---LILGDIVISFDTAKKQ 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A+ +G   E  +  L+ HGF+HLLGYDH
Sbjct: 96  ASQMGHSLEEEIKRLLAHGFVHLLGYDH 123


>gi|317404693|gb|EFV85085.1| hypothetical protein HMPREF0005_04068 [Achromobacter xylosoxidans
           C54]
          Length = 157

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 62/125 (49%), Gaps = 14/125 (11%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----PTAFASSDGCSSLMLGD 103
            V+ +  ELSL    +     LN ++R  D  TNVL+F     P   A          GD
Sbjct: 39  LVEFSAAELSLRLVGAAEGRRLNRDFRQRDYATNVLTFEYGVDPLGVAR---------GD 89

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           IV+   ++  EA    K   +H  HL +HG LH LGYDH+  +DA  ME LE + L  +G
Sbjct: 90  IVMCVPVLVREAREQRKALLDHAAHLTLHGVLHSLGYDHIKARDARRMEALETATLARMG 149

Query: 164 INDPY 168
           I DPY
Sbjct: 150 IADPY 154


>gi|288817391|ref|YP_003431738.1| putative metalloprotease [Hydrogenobacter thermophilus TK-6]
 gi|288786790|dbj|BAI68537.1| putative metalloprotease [Hydrogenobacter thermophilus TK-6]
          Length = 147

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+S+  TD   I  LN +YRG D+PT+VLSFP      +    L+LGDIV++++  + +
Sbjct: 42  AEISIYITDDETIRHLNRDYRGKDEPTDVLSFPICEKVGNW---LILGDIVISFDTAKKQ 98

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A+ +G   E  +  L+ HGF+HLLGYDH
Sbjct: 99  ASQMGHSLEEEIKRLLAHGFVHLLGYDH 126


>gi|325133946|gb|EGC56602.1| hypothetical protein TIGR00043 [Neisseria meningitidis M13399]
          Length = 171

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 111 KEAAEQGKTPERHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFPNPYQED 169


>gi|91785152|ref|YP_560358.1| hypothetical protein Bxe_A0628 [Burkholderia xenovorans LB400]
 gi|123168087|sp|Q13UD3|RRMF_BURXL RecName: Full=Probable rRNA maturation factor
 gi|91689106|gb|ABE32306.1| Protein of unknown function UPF0054 [Burkholderia xenovorans LB400]
          Length = 153

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 7/131 (5%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS 98
           AV+  I    F      EL++ F D+    TLN  YRG D  TNVL+F  A+A S+    
Sbjct: 30  AVAGWIKAALFADG---ELTVRFVDAEEGRTLNRTYRGKDYSTNVLTF--AYAESE--DD 82

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
            + GD++L   ++E EA   GK    H  HL++HG LH  GYDH  +++A  ME +E  I
Sbjct: 83  PVTGDLILCCPVVEKEAAEQGKPLVAHYAHLLVHGTLHAQGYDHEVEEEAEEMEAIETEI 142

Query: 159 LEDLGINDPYE 169
           L  LG  DPY+
Sbjct: 143 LGKLGFPDPYQ 153


>gi|148380900|ref|YP_001255441.1| putative metalloprotease [Clostridium botulinum A str. ATCC 3502]
 gi|153933017|ref|YP_001385208.1| putative metalloprotease [Clostridium botulinum A str. ATCC 19397]
 gi|153936466|ref|YP_001388677.1| putative metalloprotease [Clostridium botulinum A str. Hall]
 gi|166228924|sp|A7FXK4|RRMF_CLOB1 RecName: Full=Probable rRNA maturation factor
 gi|166228931|sp|A5I629|RRMF_CLOBH RecName: Full=Probable rRNA maturation factor
 gi|148290384|emb|CAL84511.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929061|gb|ABS34561.1| metal-binding protein [Clostridium botulinum A str. ATCC 19397]
 gi|152932380|gb|ABS37879.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum A
           str. Hall]
          Length = 166

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 21/138 (15%)

Query: 48  YFVKENIV----ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------------- 88
           Y +KE  V    E+S+VF D++ I+ +N +YR IDK T+VLSFP                
Sbjct: 27  YALKEEKVNIDYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEDGEVFKDIYLN 86

Query: 89  -AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             F  SD    +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++ 
Sbjct: 87  YEFDESDLDEGNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEED 146

Query: 147 DACVMEGLERSILEDLGI 164
           +  +M   E  IL+   +
Sbjct: 147 EKVIMRQREEEILKSFNL 164


>gi|312622489|ref|YP_004024102.1| hypothetical protein Calkro_1427 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202956|gb|ADQ46283.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 158

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 14/161 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S+   D+  I+ LN 
Sbjct: 1   MKIFIQN--QQDKVDIDQHISKIIEESIVNTIK--VFLEEENFEISVFIVDNSFIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC---------SSLMLGDIVLAYEIIEIEANVLGKEFE 123
            YR ++K T+VLSFP  F   +G            + LGDIV++ E    +A   G   E
Sbjct: 57  NYRNVNKETDVLSFPI-FEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAKEFGHSLE 115

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+
Sbjct: 116 REIAYLTVHSVLHLLGFDHIEEDDRKVMREYEEQILQSMGL 156


>gi|226950374|ref|YP_002805465.1| hypothetical protein TIGR00043 [Clostridium botulinum A2 str.
           Kyoto]
 gi|254801658|sp|C1FVS9|RRMF_CLOBJ RecName: Full=Probable rRNA maturation factor
 gi|226841958|gb|ACO84624.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum A2
           str. Kyoto]
 gi|322807265|emb|CBZ04839.1| metal-dependent hydrolase [Clostridium botulinum H04402 065]
          Length = 166

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 21/138 (15%)

Query: 48  YFVKENIV----ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------------- 88
           Y +KE  V    E+S+VF D++ I+ +N +YR IDK T+VLSFP                
Sbjct: 27  YALKEEKVNIDYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEEGEVFKDIYLN 86

Query: 89  -AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             F  SD    +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++ 
Sbjct: 87  YEFDESDLDEGNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEED 146

Query: 147 DACVMEGLERSILEDLGI 164
           +  +M   E  IL+   +
Sbjct: 147 EKVIMRQREEEILKSFNL 164


>gi|116872896|ref|YP_849677.1| putative metalloprotease [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466300|sp|A0AIR6|RRMF_LISW6 RecName: Full=Probable rRNA maturation factor
 gi|116741774|emb|CAK20898.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 161

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 12/137 (8%)

Query: 40  VSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------- 89
           V N++  + GY   +   ELSL FT +  I  +N EYR  D+ T+V+SF           
Sbjct: 23  VENILQFAAGYLKIDEGTELSLTFTTNEGIREINREYRNKDQATDVISFALEEMGEGETE 82

Query: 90  --FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             +A  D  +  MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +
Sbjct: 83  IDWADFDLETPKMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDE 142

Query: 148 ACVMEGLERSILEDLGI 164
             +M GL++ +L+  G+
Sbjct: 143 EKIMFGLQKEVLDAYGL 159


>gi|302670671|ref|YP_003830631.1| hypothetical protein bpr_I1311 [Butyrivibrio proteoclasticus B316]
 gi|302395144|gb|ADL34049.1| hypothetical protein bpr_I1311 [Butyrivibrio proteoclasticus B316]
          Length = 167

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 17/127 (13%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDG----------CS 97
           VE+SL  TD   I  +N E+R ID PT+VLSFP         F+  DG            
Sbjct: 38  VEISLTITDDEGIREINNEFRQIDSPTDVLSFPNVSYDEPGDFSVIDGEQKVDLLNPDTG 97

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           ++  GDIV+    +  +A   G   +     L+ H  LHL GYDH+++++A VMEG +  
Sbjct: 98  NISFGDIVINVNRVRSQALEYGHSEKREFAFLVAHSMLHLCGYDHMEEQEAAVMEGKQND 157

Query: 158 ILEDLGI 164
           IL  LGI
Sbjct: 158 ILTYLGI 164


>gi|302333246|gb|ADL23439.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 155

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 5/119 (4%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS-----LMLGDIVL 106
           E+  ELS+ F D   I+ +N  YR  DK T+V+SF       D   S      +LGDI++
Sbjct: 35  EDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPDIDFSGFDIPRVLGDIII 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             ++ + +AN  G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL   G+ 
Sbjct: 95  CTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGLT 153


>gi|171060619|ref|YP_001792968.1| hypothetical protein Lcho_3949 [Leptothrix cholodnii SP-6]
 gi|170778064|gb|ACB36203.1| protein of unknown function UPF0054 [Leptothrix cholodnii SP-6]
          Length = 160

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 7/114 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E ++   D+   + LN +YRG D  TNVL+F  +         ++  D+VL   ++E EA
Sbjct: 48  EFTVRIVDAEEAQGLNRDYRGKDYATNVLTFDYS------AEPVVAADLVLCAPVVEAEA 101

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC-VMEGLERSILEDLGINDPY 168
              GK    H  HL++HG LH  GYDH DD++A   ME  ER +L  LG +DPY
Sbjct: 102 AAAGKTLVAHYAHLLVHGALHAQGYDHEDDEEAAECMEAREREVLAALGFDDPY 155


>gi|293366469|ref|ZP_06613146.1| metal-dependent hydrolase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319238|gb|EFE59607.1| metal-dependent hydrolase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329735371|gb|EGG71663.1| translation metalloprotein YbeY [Staphylococcus epidermidis VCU045]
          Length = 155

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 13/136 (9%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----T 88
           + FAK   N+         N  ELS+ F D   I+ +N  YR  DK T+V+SF       
Sbjct: 25  LTFAKKKENI--------HNDAELSVTFVDKDEIQNINKVYRDKDKVTDVISFALEEDEP 76

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
               +D     +LGDI++  ++ + ++   G  FE  L  L +HGFLHLLGYDH++D D 
Sbjct: 77  EIDFNDFDIPRVLGDIIICRDVAKEQSESYGHSFERELGFLALHGFLHLLGYDHMNDNDE 136

Query: 149 CVMEGLERSILEDLGI 164
             M G + +IL + G+
Sbjct: 137 KEMFGRQDAILNEFGL 152


>gi|309803146|ref|ZP_07697243.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           11V1-d]
 gi|325912150|ref|ZP_08174548.1| translation metalloprotein YbeY [Lactobacillus iners UPII 143-D]
 gi|308164654|gb|EFO66904.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           11V1-d]
 gi|325476100|gb|EGC79268.1| translation metalloprotein YbeY [Lactobacillus iners UPII 143-D]
          Length = 175

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-- 100
           L +K    K N  E+S+ F D ++I  +N  YRG D+PT+V+SF    A  DG  + +  
Sbjct: 31  LSAKKNIKKTNRQEMSINFVDINKIHEINKNYRGKDRPTDVISF----AIEDGTDNDLFA 86

Query: 101 -----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                      +GD+ +  E++E  A      F     + ++HG+LHL GYDH+ D +A 
Sbjct: 87  QFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFGYTLVHGYLHLNGYDHIKDDEAE 146

Query: 150 VMEGLERSILEDLGI 164
           VM G++  +LE+ G+
Sbjct: 147 VMFGIQSKVLEEYGL 161


>gi|224476678|ref|YP_002634284.1| hypothetical protein Sca_1192 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254799973|sp|B9DNL6|RRMF_STACT RecName: Full=Probable rRNA maturation factor
 gi|222421285|emb|CAL28099.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 153

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--GCS-SLMLGDIVLAY 108
           E+  ELS+ F +   I+ +N +YR  DK T+V+SF       D  G     +LGDI++  
Sbjct: 35  EDDAELSVTFVNKQEIQEINRDYRNKDKVTDVISFALEEDEPDIEGLDMPRVLGDIIICA 94

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++ + +A   G  FE  L  L +HGFLHLLGYDH+++ D   M G ++ IL++ G+
Sbjct: 95  DVAKEQAEEYGHSFERELGFLALHGFLHLLGYDHMNEADEKEMFGRQKLILDNYGL 150


>gi|257065846|ref|YP_003152102.1| hypothetical protein Apre_0330 [Anaerococcus prevotii DSM 20548]
 gi|256797726|gb|ACV28381.1| protein of unknown function UPF0054 [Anaerococcus prevotii DSM
           20548]
          Length = 446

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 2/116 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+ F D   I  LN E+R +D+PT+VLSFP         +  MLGDIV+  ++ + +A
Sbjct: 37  EVSITFVDREEIHRLNREFRDVDRPTDVLSFPLDDTIDLPDADKMLGDIVICLDVAKDQA 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI--NDPYE 169
              G      +++L  H  LHLLGYDH+++ +   M   E+ ++ +L +  ND +E
Sbjct: 97  MEFGHSLRREIMYLTCHSTLHLLGYDHMEEDEKREMRRREKEVMRNLRVFKNDDHE 152


>gi|319639195|ref|ZP_07993946.1| metalloprotease [Neisseria mucosa C102]
 gi|317399379|gb|EFV80049.1| metalloprotease [Neisseria mucosa C102]
          Length = 171

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 14/125 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------PTAFASSDGCSSLMLGDIVL 106
            ++SL+  D       N +YRG D  TNVLSF        P  F  SDG    + GD+V+
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQF--SDG----LYGDLVI 104

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
             +++  EA+  GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +
Sbjct: 105 CPQVVLKEASEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPN 164

Query: 167 PYEVD 171
           PY+ D
Sbjct: 165 PYQED 169


>gi|289450697|ref|YP_003475263.1| GTP-binding protein Era [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185244|gb|ADC91669.1| GTP-binding protein Era [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 563

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 16/168 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENI-VELSLVFTDSHRIETLN 71
           +Q   E   W     LR +         S L    Y  +E +  E ++ F  +  + +LN
Sbjct: 3   IQFQKEKCKWST-AELRQIIRYTLQAGFSYLPFSDYLSEEGLQPEFAVTFIGADAMRSLN 61

Query: 72  FEYRGIDKPTNVLSFP-------------TAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
            E RGIDK T+VLSFP             TA   +   +S+ LGDIV+  +  E +A   
Sbjct: 62  KEQRGIDKVTDVLSFPMLAMKKGALEEHLTAADINPENNSVFLGDIVICLDRAEEQALEF 121

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGIN 165
               +  +  L +H  LHL+GYDHVD++ D   ME ++R +L++LGI 
Sbjct: 122 NHTMQREVAFLTLHSMLHLVGYDHVDNETDRLEMEEIQRELLDNLGIK 169


>gi|309806598|ref|ZP_07700595.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           03V1-b]
 gi|312872992|ref|ZP_07733052.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2062A-h1]
 gi|312874169|ref|ZP_07734203.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2052A-d]
 gi|315653579|ref|ZP_07906499.1| metal-dependent hydrolase [Lactobacillus iners ATCC 55195]
 gi|308167018|gb|EFO69200.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           03V1-b]
 gi|311090239|gb|EFQ48649.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2052A-d]
 gi|311091514|gb|EFQ49898.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2062A-h1]
 gi|315488941|gb|EFU78583.1| metal-dependent hydrolase [Lactobacillus iners ATCC 55195]
          Length = 175

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-- 100
           L +K    K N  E+S+ F D ++I  +N  YRG D+PT+V+SF    A  DG  + +  
Sbjct: 31  LSAKKNIKKTNRQEMSINFVDINKIHEINKNYRGKDRPTDVISF----AIEDGTDNDLFA 86

Query: 101 -----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                      +GD+ +  E++E  A      F     + ++HG+LHL GYDH+ D +A 
Sbjct: 87  QFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFGYTLVHGYLHLNGYDHIKDDEAE 146

Query: 150 VMEGLERSILEDLGI 164
           VM G++  +LE+ G+
Sbjct: 147 VMFGIQSKVLEEYGL 161


>gi|256851189|ref|ZP_05556578.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260660613|ref|ZP_05861528.1| metal-dependent hydrolase [Lactobacillus jensenii 115-3-CHN]
 gi|282934655|ref|ZP_06339898.1| putative metalloprotease [Lactobacillus jensenii 208-1]
 gi|297206054|ref|ZP_06923449.1| metal-dependent hydrolase [Lactobacillus jensenii JV-V16]
 gi|256616251|gb|EEU21439.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260548335|gb|EEX24310.1| metal-dependent hydrolase [Lactobacillus jensenii 115-3-CHN]
 gi|281301230|gb|EFA93531.1| putative metalloprotease [Lactobacillus jensenii 208-1]
 gi|297149180|gb|EFH29478.1| metal-dependent hydrolase [Lactobacillus jensenii JV-V16]
          Length = 174

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-----CS 97
           L++K    K+N +E+S+ F D  +   +N +YRG D+PT+V+SF    A  DG      S
Sbjct: 31  LMAKKEISKDNNLEMSINFVDEDKSHQINRDYRGKDRPTDVISF----AIEDGEEGVDLS 86

Query: 98  SLM--------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
           S +        +GD+ +   +I+  A   G  F+    + ++HGFLHL GYDH++  +A 
Sbjct: 87  SFIEDPDFTEDIGDLFMCISVIKRHAEEYGTGFDREFGYTLVHGFLHLNGYDHIEPAEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LE+ G+
Sbjct: 147 EMFGIQGKVLEEYGL 161


>gi|326389851|ref|ZP_08211415.1| protein of unknown function UPF0054 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|325994119|gb|EGD52547.1| protein of unknown function UPF0054 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 159

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 10/120 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASS---------DGCSSLMLGDI 104
           VE+S+ F D+  I  LN  YRGIDKPT+VLSFP A F  +         D      +GDI
Sbjct: 38  VEVSVSFVDNEEIRKLNKYYRGIDKPTDVLSFPLAEFEETYGEVEKIEEDSEEVQPIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           V++ E    ++   G  FE  + +L  H  LHLLGYDH  +++  +M   E  ++  L I
Sbjct: 98  VISLEKALEQSIEYGHSFEREVAYLTAHSMLHLLGYDHETEEERKIMREKEEEVMARLNI 157


>gi|259500585|ref|ZP_05743487.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|302191276|ref|ZP_07267530.1| hypothetical protein LineA_04632 [Lactobacillus iners AB-1]
 gi|259167969|gb|EEW52464.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
          Length = 175

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-- 100
           L +K    K N  E+S+ F D ++I  +N  YRG D+PT+V+SF    A  DG  + +  
Sbjct: 31  LSAKKNIKKTNRQEMSINFVDINKIHEINKNYRGKDRPTDVISF----AIEDGTDNDLFA 86

Query: 101 -----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                      +GD+ +  E++E  A      F     + ++HG+LHL GYDH+ D +A 
Sbjct: 87  QFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFGYTLVHGYLHLNGYDHIKDDEAE 146

Query: 150 VMEGLERSILEDLGI 164
           VM G++  +LE+ G+
Sbjct: 147 VMFGIQSKVLEEYGL 161


>gi|291459261|ref|ZP_06598651.1| putative metalloprotease [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418515|gb|EFE92234.1| putative metalloprotease [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 165

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 60/125 (48%), Gaps = 16/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E+S++FTD+  I  +N + RGID PT+VLSFP A     G                   
Sbjct: 38  CEISVLFTDNEGIRAINRDSRGIDAPTDVLSFPMAEYKRPGDFSIFREGDPELFNPDTGD 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIVL  + IE +A   G      L  L  H  LHL GYDH+ + +   ME  +R I
Sbjct: 98  FFLGDIVLNLDRIESQAREYGHSERRELAFLTAHSMLHLFGYDHMAEGERSEMERRQREI 157

Query: 159 LEDLG 163
           LE  G
Sbjct: 158 LEGKG 162


>gi|59799018|sp|Q62ML1|RRMF_BURMA RecName: Full=Probable rRNA maturation factor
 gi|145558842|sp|Q3JVV3|RRMF_BURP1 RecName: Full=Probable rRNA maturation factor
          Length = 184

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 35  PELDLAVQ-----YGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDTQFTVRFVGADEGR 86

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 87  ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 142

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 143 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 183


>gi|227890110|ref|ZP_04007915.1| metal-dependent hydrolase [Lactobacillus johnsonii ATCC 33200]
 gi|227849554|gb|EEJ59640.1| metal-dependent hydrolase [Lactobacillus johnsonii ATCC 33200]
          Length = 175

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 13/155 (8%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + DE+      +  +   +SNL+  +K    KEN  E+S+ F  S +I  +N +YRG D+
Sbjct: 8   FNDEVTFLKDSDKDWISWISNLLLSAKKEIHKENSQEMSINFVSSKKIHEINKKYRGKDR 67

Query: 80  PTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           PT+V+SF           +AF S D      +GD+ L  E+I+  +      F     + 
Sbjct: 68  PTDVISFAIEDGLDEDFMSAF-SDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFGYT 126

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++HG+LHL GYDH++D +A +M G++  +L + G+
Sbjct: 127 LVHGYLHLNGYDHIEDDEAKIMFGIQGKVLREYGL 161


>gi|170759303|ref|YP_001788261.1| putative metalloprotease [Clostridium botulinum A3 str. Loch Maree]
 gi|238688538|sp|B1KZM6|RRMF_CLOBM RecName: Full=Probable rRNA maturation factor
 gi|169406292|gb|ACA54703.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum A3
           str. Loch Maree]
          Length = 166

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 23/150 (15%)

Query: 36  FAKAVSNLISKGYFVKENIV----ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--- 88
           F   +  +I   Y +KE  V    E+S++F D++ I+ +N +YR IDK T+VLSFP    
Sbjct: 17  FENKIKEIID--YALKEEKVNIDYEISVIFIDNNSIKEINKDYRNIDKATDVLSFPMLDY 74

Query: 89  -------------AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
                         F  SD    +L+LGDI L+ E  E ++   G  F     +L IH  
Sbjct: 75  EEGEVFKDVYLNYEFDESDLDEGNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSV 134

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           LHLLGYDH+++ +  +M   E  IL+   +
Sbjct: 135 LHLLGYDHMEEDEKAIMRQREEEILKSFNL 164


>gi|161869467|ref|YP_001598633.1| hypothetical protein NMCC_0479 [Neisseria meningitidis 053442]
 gi|161595020|gb|ABX72680.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 211

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 10/123 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAY 108
            ++SL+  D       N +YRG D  TNVLSF    A ++G       S  + GD+++  
Sbjct: 91  ADISLILLDEEEARAYNRDYRGKDYATNVLSF----ALNEGETLPGQVSEKLYGDLIICP 146

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++  EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY
Sbjct: 147 QVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFPNPY 206

Query: 169 EVD 171
           + D
Sbjct: 207 QED 209


>gi|297544406|ref|YP_003676708.1| hypothetical protein Tmath_0963 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842181|gb|ADH60697.1| protein of unknown function UPF0054 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 159

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASS-------DGCSSLM--LGDI 104
           VE+S+ F D+  +  LN  YRGIDKPT+VLSFP A F  +       D  S  +  +GDI
Sbjct: 38  VEVSVSFVDNEEMRKLNKYYRGIDKPTDVLSFPLAEFEETYDKIEKIDQESEEVQPIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           V++ E    ++   G  FE  + +L  H  LHLLGYDH  +++  +M   E  I+  L I
Sbjct: 98  VISLEKALEQSMEYGHSFEREVAYLTAHSMLHLLGYDHQTEEERKIMRQKEEEIMARLNI 157

Query: 165 N 165
            
Sbjct: 158 R 158


>gi|220932095|ref|YP_002509003.1| conserved hypothetical protein TIGR00043 [Halothermothrix orenii H
           168]
 gi|219993405|gb|ACL70008.1| conserved hypothetical protein TIGR00043 [Halothermothrix orenii H
           168]
          Length = 142

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 8/123 (6%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  +I+K   V++    +S+   D+  I  LN +YR ++ PT+VLSFP            
Sbjct: 23  IETVINKTAEVEKASGTVSVALVDNKTIAELNSKYRNVEGPTDVLSFP--------MDED 74

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDI+++ +    +A+  G   E  L  L +HG LHLLGY+H  D++ CVM   E  +L
Sbjct: 75  ILGDIIISIDRARQQADEYGHSLERELGFLTVHGMLHLLGYNHKTDEEKCVMRQKEERVL 134

Query: 160 EDL 162
           ++L
Sbjct: 135 KEL 137


>gi|59799019|sp|Q63X65|RRMF_BURPS RecName: Full=Probable rRNA maturation factor
          Length = 184

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 35  PELDLAVQ-----YGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 86

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 87  ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 142

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 143 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 183


>gi|116617889|ref|YP_818260.1| metal-dependent hydrolase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271910|sp|Q03Y35|RRMF_LEUMM RecName: Full=Probable rRNA maturation factor
 gi|116096736|gb|ABJ61887.1| Predicted metal-dependent hydrolase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 160

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 15/123 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------------PTAFASSDGCSSLMLG 102
            E+S+ F ++  I   N +YRGIDKPT+V+SF            P     ++   ++  G
Sbjct: 38  TEMSVTFMNNEEIHQYNKKYRGIDKPTDVISFAIEEDGDDLPVLPDELMDAELAKNI--G 95

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILED 161
           DI+++ +II  +A  LG  +E  L  L++HGFLHL GYDH+  D +   M  L+R IL++
Sbjct: 96  DILVSVDIINSQAEYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFDLQREILDN 155

Query: 162 LGI 164
            G+
Sbjct: 156 YGL 158


>gi|308069930|ref|YP_003871535.1| hypothetical protein PPE_03178 [Paenibacillus polymyxa E681]
 gi|305859209|gb|ADM70997.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 165

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 16/124 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---------------PTAFASSDGCSSLM 100
           E++L F +  +I  LN +YRGID+PT+VLSF               P    S +    + 
Sbjct: 41  EVALTFVNDEQIHELNRDYRGIDRPTDVLSFAMKETLDEELEIIYEPNEENSLNDVPDV- 99

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDI+++ +  + ++   G   E  +  L +HGFLHLLGYDH DD     M G + ++L 
Sbjct: 100 LGDIIISVQTAQAQSEEYGHSIEREIGFLFVHGFLHLLGYDHQDDVSEAEMMGKQEAVLA 159

Query: 161 DLGI 164
             G+
Sbjct: 160 QAGL 163


>gi|239623718|ref|ZP_04666749.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521749|gb|EEQ61615.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 165

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 16/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++++ TD+  I  +N EYR ID PT+VLSFP     +                     
Sbjct: 38  AEVNVILTDNEAIREINREYREIDSPTDVLSFPMVDYGTPSDFDHVEEAVEDYFNPETGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           LMLGDIV++ + +E +A   G      L  L+ H  LHL GYDH+++ +   ME  +R I
Sbjct: 98  LMLGDIVVSVDKVEEQAEKYGHSETRELAFLVAHSMLHLFGYDHMEEGEREQMEDRQRKI 157

Query: 159 LEDLG 163
           LE  G
Sbjct: 158 LETRG 162


>gi|78043035|ref|YP_359288.1| hypothetical protein CHY_0427 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123576940|sp|Q3AEZ6|RRMF_CARHZ RecName: Full=Probable rRNA maturation factor
 gi|77995150|gb|ABB14049.1| conserved hypothetical protein TIGR00043 [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 143

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 4/108 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+   D++ I++LN EYR  D PT+VLSFP A    D     +LGD+V++ E    +A 
Sbjct: 38  VSIALVDNNYIQSLNREYRQKDVPTDVLSFPLA----DDKDDEVLGDVVISLEKAAEQAK 93

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             G  F   +  L +HG LHLLG+DH ++++  +M   E  IL  LG+
Sbjct: 94  EYGHSFFREVAFLTVHGVLHLLGHDHYEEEETRIMREKEEKILSALGL 141


>gi|57867019|ref|YP_188713.1| hypothetical protein SERP1137 [Staphylococcus epidermidis RP62A]
 gi|62901408|sp|Q5HNX7|RRMF_STAEQ RecName: Full=Probable rRNA maturation factor
 gi|57637677|gb|AAW54465.1| conserved hypothetical protein TIGR00043 [Staphylococcus
           epidermidis RP62A]
          Length = 155

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 13/136 (9%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----T 88
           + FAK   N+         N  ELS+ F D   I+ +N  YR  DK T+V+SF       
Sbjct: 25  LTFAKKKENI--------HNDAELSVTFVDKDEIQNINKVYRDKDKVTDVISFALEEDEP 76

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
               +D     +LGDI++  ++ + ++   G  FE  L  L +HGFLHLLGYDH++D D 
Sbjct: 77  EIDFNDFDIPRVLGDIIICTDVAKEQSESYGHSFERELGFLALHGFLHLLGYDHMNDNDE 136

Query: 149 CVMEGLERSILEDLGI 164
             M G + +IL + G+
Sbjct: 137 KEMFGRQDAILNEFGL 152


>gi|27468175|ref|NP_764812.1| hypothetical protein SE1257 [Staphylococcus epidermidis ATCC 12228]
 gi|251810987|ref|ZP_04825460.1| metal-dependent hydrolase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876004|ref|ZP_06284871.1| metalloprotein, YbeY/ UPF0054family [Staphylococcus epidermidis
           SK135]
 gi|29428185|sp|Q8CSD3|RRMF_STAES RecName: Full=Probable rRNA maturation factor
 gi|27315721|gb|AAO04856.1|AE016748_90 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|251805497|gb|EES58154.1| metal-dependent hydrolase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295029|gb|EFA87556.1| metalloprotein, YbeY/ UPF0054family [Staphylococcus epidermidis
           SK135]
 gi|329725400|gb|EGG61883.1| translation metalloprotein YbeY [Staphylococcus epidermidis VCU144]
 gi|329737264|gb|EGG73518.1| translation metalloprotein YbeY [Staphylococcus epidermidis VCU028]
          Length = 155

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 13/136 (9%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----T 88
           + FAK   N+         N  ELS+ F D   I+ +N  YR  DK T+V+SF       
Sbjct: 25  LTFAKKKENI--------HNDAELSVTFVDKDEIQNINKVYRDKDKVTDVISFALEEDEP 76

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
               +D     +LGDI++  ++ + ++   G  FE  L  L +HGFLHLLGYDH++D D 
Sbjct: 77  EIDFNDFDIPRVLGDIIICTDVAKEQSESYGHSFERELGFLALHGFLHLLGYDHMNDNDE 136

Query: 149 CVMEGLERSILEDLGI 164
             M G + +IL + G+
Sbjct: 137 KEMFGRQDAILNEFGL 152


>gi|331001780|ref|ZP_08325302.1| hypothetical protein HMPREF0491_00164 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412754|gb|EGG92137.1| hypothetical protein HMPREF0491_00164 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 164

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 19/128 (14%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----------------TAFASSDGCS 97
            E+S+   D   I  +N EYRGIDK T+VLSFP                  AF    G  
Sbjct: 38  AEVSVTIVDDDEIRRINNEYRGIDKSTDVLSFPFNEFDIPGNFDNVEENVDAFNPESG-- 95

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
            L+LGDI+L+ E I  +A   G      L  L++H  LHL+GYDH+ D +   ME  +R 
Sbjct: 96  ELLLGDIILSTEHIIEQAREYGHSETRELAFLVVHSMLHLMGYDHMIDDERKDMEDRQRK 155

Query: 158 ILEDLGIN 165
           ILE  GI+
Sbjct: 156 ILEFEGIS 163


>gi|329667243|gb|AEB93191.1| putative metal-dependent hydrolase [Lactobacillus johnsonii DPC
           6026]
          Length = 175

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 13/155 (8%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + DE++     +  +   +S+L+  +K    KEN  E+S+ F  S +I  +N +YRG D+
Sbjct: 8   FNDEVNFLKDSDKDWIPWISDLLLSAKKEIHKENTQEMSINFVSSKKIHEINKKYRGKDR 67

Query: 80  PTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           PT+V+SF           +AF S D      +GD+ L  E+I+  +      F     + 
Sbjct: 68  PTDVISFAIEDGLDEDFMSAF-SDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFGYT 126

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++HG+LHL GYDH++D +A +M G++  +L + G+
Sbjct: 127 LVHGYLHLNGYDHIEDDEAKIMFGIQGKVLREYGL 161


>gi|121610982|ref|YP_998789.1| hypothetical protein Veis_4066 [Verminephrobacter eiseniae EF01-2]
 gi|145558824|sp|A1WQ64|RRMF_VEREI RecName: Full=Probable rRNA maturation factor
 gi|121555622|gb|ABM59771.1| protein of unknown function UPF0054 [Verminephrobacter eiseniae
           EF01-2]
          Length = 154

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 8/114 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           + + +V  D  R   LN  YR  D  TNVL+F  + A       L+  D++L   +IE E
Sbjct: 44  ITVRIVGADEGR--QLNRTYRNKDYATNVLTFVYSQAP------LVTADLLLCAPVIERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK  + H  H+++HG LH  G+DH    DA  M+  E  I++ LG  DPY
Sbjct: 96  AQQQGKHLQAHYAHMLVHGTLHAQGWDHEGSADADAMQARETQIMQALGFADPY 149


>gi|154498349|ref|ZP_02036727.1| hypothetical protein BACCAP_02338 [Bacteroides capillosus ATCC
           29799]
 gi|150272660|gb|EDM99838.1| hypothetical protein BACCAP_02338 [Bacteroides capillosus ATCC
           29799]
          Length = 164

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 18/163 (11%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ +E  + G E +   L +V+ A     L ++G  V     E+ ++FTD   I  +N E
Sbjct: 4   ELIIETEVEGAEPYADLLRQVIPAA----LEAEGVAVP---WEVDVLFTDDEGIHQINLE 56

Query: 74  YRGIDKPTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
            R +D+PT+VLSFP          T   +  G   + LGD+V++ E  + +    G    
Sbjct: 57  QREVDRPTDVLSFPMFDLQPGEHPTEEDADPGTGLVPLGDMVISLERAQAQGEEYGHGTR 116

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKD-ACVMEGLERSILEDLGIN 165
             + +L +H  LHLLGYDH+D+      M   E +ILE LGI 
Sbjct: 117 REVAYLAVHSVLHLLGYDHMDEGPMKAQMRAREEAILEQLGIT 159


>gi|149926994|ref|ZP_01915252.1| hypothetical protein LMED105_09072 [Limnobacter sp. MED105]
 gi|149824215|gb|EDM83435.1| hypothetical protein LMED105_09072 [Limnobacter sp. MED105]
          Length = 165

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 2/103 (1%)

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFA--SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           + LN ++RG D  TNVL+FP       +D    + + DIV+   ++E EA   GK+  +H
Sbjct: 57  QQLNRDFRGKDYATNVLTFPMDMPDLGADSGLPVFMADIVICPAVVEREALEQGKDPIDH 116

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L HLI+HG LH  GY H  D  A +ME  E  IL+   I++PY
Sbjct: 117 LAHLIVHGCLHAQGYVHESDNQAELMENREIEILKRFKISNPY 159


>gi|163783493|ref|ZP_02178484.1| hypothetical protein HG1285_08769 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881257|gb|EDP74770.1| hypothetical protein HG1285_08769 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 142

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS++ TD   I  LN  YRG D+PT+VLSFP      +    L+LGD+V++ +    +A
Sbjct: 35  ELSILLTDDEEIRELNRVYRGKDRPTDVLSFPIG---EEVAGRLILGDVVISLDTARRQA 91

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
             LG   E  +  L+ HG +HLLGYDH
Sbjct: 92  EGLGHTLEEEVSRLLAHGIIHLLGYDH 118


>gi|58337484|ref|YP_194069.1| hypothetical protein LBA1202 [Lactobacillus acidophilus NCFM]
 gi|227904120|ref|ZP_04021925.1| metal-dependent hydrolase [Lactobacillus acidophilus ATCC 4796]
 gi|62901404|sp|Q5FJT6|RRMF_LACAC RecName: Full=Probable rRNA maturation factor
 gi|58254801|gb|AAV43038.1| hypothetical protein LBA1202 [Lactobacillus acidophilus NCFM]
 gi|227868139|gb|EEJ75560.1| metal-dependent hydrolase [Lactobacillus acidophilus ATCC 4796]
          Length = 174

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N +E+S+ F +  R   +N +YR  D+PT+V+SF    A  DG  S+ L 
Sbjct: 31  LLAKKEIGKDNNLEMSINFVNEDRSHEINLKYRDKDRPTDVISF----AIEDGEDSIDLA 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I   +   G  F+    + I+HGFLHL GYDH++  +A 
Sbjct: 87  AFKDDPDFQEDIGDLFMCPSVISRHSKEYGTGFDREFGYTIVHGFLHLNGYDHIEPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LED G+
Sbjct: 147 EMFGIQGKVLEDYGL 161


>gi|302391406|ref|YP_003827226.1| hypothetical protein Acear_0619 [Acetohalobium arabaticum DSM 5501]
 gi|302203483|gb|ADL12161.1| protein of unknown function UPF0054 [Acetohalobium arabaticum DSM
           5501]
          Length = 141

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 8/109 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+   D+  I+ LN EYRG+D+PT+VLSFP            MLGDI+++ E  E +A
Sbjct: 39  EVSIALVDNEYIKELNAEYRGLDEPTDVLSFP--------LGEEMLGDIIISLERAESQA 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
                  +  +  L +HG LHLLGYDH +++    M   E  +L  L +
Sbjct: 91  EEYNHSLDREMGFLTVHGMLHLLGYDHKEEEAKEEMRNREEKVLNKLDL 139


>gi|238916903|ref|YP_002930420.1| hypothetical protein EUBELI_00972 [Eubacterium eligens ATCC 27750]
 gi|259710181|sp|C4Z060|RRMF_EUBE2 RecName: Full=Probable rRNA maturation factor
 gi|238872263|gb|ACR71973.1| Hypothetical protein EUBELI_00972 [Eubacterium eligens ATCC 27750]
          Length = 169

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 20/130 (15%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--TAFASSD------------------ 94
            E+++   DS  I  +N EYR ID PT+VLSFP       SD                  
Sbjct: 38  AEVNVTIVDSESIHEINKEYRNIDSPTDVLSFPGVNYVTPSDFDAIEDELENNAEDYFNP 97

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L+LGDIVL  + I+ +A+  G   +  L  L  H  +HL GYDH+  +++ VME  
Sbjct: 98  DTGELLLGDIVLCVQKIKEQADKYGHSEKRELAFLTAHSMMHLFGYDHMTPEESAVMEAK 157

Query: 155 ERSILEDLGI 164
           +  +LE LGI
Sbjct: 158 QNEVLERLGI 167


>gi|218767660|ref|YP_002342172.1| hypothetical protein NMA0717 [Neisseria meningitidis Z2491]
 gi|26006911|sp|Q9JVS5|RRMF_NEIMA RecName: Full=Probable rRNA maturation factor
 gi|121051668|emb|CAM07971.1| hypothetical protein NMA0717 [Neisseria meningitidis Z2491]
          Length = 171

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +  GY       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKSGY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMLAAGFPNPYQED 169


>gi|319795922|ref|YP_004157562.1| hypothetical protein Varpa_5295 [Variovorax paradoxus EPS]
 gi|315598385|gb|ADU39451.1| protein of unknown function UPF0054 [Variovorax paradoxus EPS]
          Length = 152

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D+   + LN E+RG D  TNVL+F  A       S + + D+VL   ++  EA
Sbjct: 43  EITVRIVDADEGQRLNREFRGKDYATNVLTFDYA------QSPVAMADLVLCAPVVAREA 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
               K    H  HL++HG LH  G+DH   + DA  ME  E  IL +LGI DPY
Sbjct: 97  KEQRKTLAAHYAHLLVHGTLHAQGWDHETSEADADEMEAYEIQILAELGIRDPY 150


>gi|295110094|emb|CBL24047.1| conserved hypothetical protein TIGR00043 [Ruminococcus obeum
           A2-162]
          Length = 164

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 15/124 (12%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSS--------LML 101
           ++LV TD+  I+ +N E+R I  PT+VLSFP         ++  +G  S        L+L
Sbjct: 40  VNLVITDNEEIKRVNTEFRSIGAPTDVLSFPMIPFETPADYSVIEGDDSYFDLDTEELIL 99

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GD++++ + +  +A   G   E     L  H  LHLLGYDH++  +A VME  +   LED
Sbjct: 100 GDVMISVDKVYAQAEEYGHSTEREFSFLFAHSMLHLLGYDHMEPDEAAVMEAKQAKALED 159

Query: 162 LGIN 165
           LGI 
Sbjct: 160 LGIT 163


>gi|294101753|ref|YP_003553611.1| protein of unknown function UPF0054 [Aminobacterium colombiense DSM
           12261]
 gi|293616733|gb|ADE56887.1| protein of unknown function UPF0054 [Aminobacterium colombiense DSM
           12261]
          Length = 178

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 28  LRTL--CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           LR L  CE V  + V  L    Y  ++  V +S+V T    ++ +N EYRGID+PT+VLS
Sbjct: 21  LRKLEGCEEVLERVVQRLFQGRYENQQAEVSISIVSTTE--MQEINREYRGIDQPTDVLS 78

Query: 86  FPT-----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           FP       F    G   L LGDI++  E++   A      +   L  ++ HGFLHLLG 
Sbjct: 79  FPMWEEGEEFCPPSGWEMLPLGDILICEEVVRENARQNNVSYIEELYLIVAHGFLHLLGI 138

Query: 141 DH 142
           DH
Sbjct: 139 DH 140


>gi|295399217|ref|ZP_06809199.1| protein of unknown function UPF0054 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978683|gb|EFG54279.1| protein of unknown function UPF0054 [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 156

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAY 108
            E+ + F D+ RI  +N +YRG D+PT+V+SF                + L+LGDI+++ 
Sbjct: 39  AEVGVSFVDNERIRIINRDYRGKDQPTDVISFALEEKGEGEIEIVGADAPLLLGDIIISI 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              + +A   G  F   L  L +HGFLHLLGYDH  +++  +M   ++ ILE  G+ 
Sbjct: 99  PKAKEQAEEYGHSFMRELGFLAVHGFLHLLGYDHKTEEEEKIMFSKQKDILEQYGLT 155


>gi|328957478|ref|YP_004374864.1| putative metalloprotease [Carnobacterium sp. 17-4]
 gi|328673802|gb|AEB29848.1| putative metalloprotease [Carnobacterium sp. 17-4]
          Length = 158

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 10/120 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCSSLMLGDI 104
            E+S+ F D+  I+ +N  YRG D+PT+V+SF             F + +      +GDI
Sbjct: 37  TEMSVTFVDNENIQKINKTYRGKDQPTDVISFAIEDEAEDELMINFDTLEEPMPRNIGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ +    +A+  G  F+  L  L +HGFLHL GYDH+  +D   M GL++ ILE  G+
Sbjct: 97  IISVDKTASQADEYGHSFDRELGFLALHGFLHLNGYDHMTPEDEKEMFGLQKEILEAYGL 156


>gi|299822888|ref|ZP_07054774.1| probable metalloprotease [Listeria grayi DSM 20601]
 gi|299816417|gb|EFI83655.1| probable metalloprotease [Listeria grayi DSM 20601]
          Length = 161

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 18/168 (10%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +PRL+L +  E      E +      + FA          Y   E   E+S+ FTD+ RI
Sbjct: 1   MPRLELDMIDETEKLPKETNALVFDILQFAA--------DYLKLEEGTEMSVTFTDNERI 52

Query: 68  ETLNFEYRGIDKPTNVLSFPTA----------FASSDGCSSLMLGDIVLAYEIIEIEANV 117
             +N EYR  D+ T+V+SF             +   +      LGDI+++ E  E +A  
Sbjct: 53  REINREYRDKDQATDVISFALEELGEGETEIDWGELEVEVPRNLGDIIISTEKAEEQAAS 112

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G   E  +  L +HG LHLLGYDH++ ++  VM GL++ +L+  G+ 
Sbjct: 113 YGHTKEREVGFLAVHGLLHLLGYDHMEKEEEKVMFGLQKEVLDAYGLQ 160


>gi|262068037|ref|ZP_06027649.1| putative metalloprotease [Fusobacterium periodonticum ATCC 33693]
 gi|291378259|gb|EFE85777.1| putative metalloprotease [Fusobacterium periodonticum ATCC 33693]
          Length = 162

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LS++ TD+  I+ +N EYR  D PT+V+SF  A+  +D  +      LGDI+++ E +E 
Sbjct: 50  LSVLLTDNKNIQVINREYRDKDAPTDVISF--AYHETDDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +++     F+    +++ HG LH+LGYDH+++ D  VM   E +IL   G
Sbjct: 108 QSSEYNHSFKREFYYVLTHGILHILGYDHIEEDDKKVMREREEAILSSFG 157


>gi|292669777|ref|ZP_06603203.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292648574|gb|EFF66546.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 153

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 8/117 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA------SSDGCSSLMLGDIVLAY 108
            E+S+  TD   +  LN EYR +D+PT+VLSF  A +       +DG   ++LGD+V++ 
Sbjct: 38  AEVSVTLTDDAHVHVLNREYRNVDRPTDVLSFALAESEEPEIIGADG--GMVLGDLVISL 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           E    +A   G      L  L +HG LHLLGYDH+++++   ME  +R ++E+LGI 
Sbjct: 96  ERTAAQAEEYGHSMLRELSFLTVHGMLHLLGYDHMEEEERLEMEEEQRHVMEELGIQ 152


>gi|125973584|ref|YP_001037494.1| hypothetical protein Cthe_1069 [Clostridium thermocellum ATCC
           27405]
 gi|256003403|ref|ZP_05428394.1| protein of unknown function UPF0054 [Clostridium thermocellum DSM
           2360]
 gi|281417789|ref|ZP_06248809.1| protein of unknown function UPF0054 [Clostridium thermocellum JW20]
 gi|166228137|sp|A3DEC2|RRMF_CLOTH RecName: Full=Probable rRNA maturation factor
 gi|125713809|gb|ABN52301.1| protein of unknown function UPF0054 [Clostridium thermocellum ATCC
           27405]
 gi|255992693|gb|EEU02784.1| protein of unknown function UPF0054 [Clostridium thermocellum DSM
           2360]
 gi|281409191|gb|EFB39449.1| protein of unknown function UPF0054 [Clostridium thermocellum JW20]
 gi|316940174|gb|ADU74208.1| protein of unknown function UPF0054 [Clostridium thermocellum DSM
           1313]
          Length = 162

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 15/163 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I +EN    D+I +      +  KA+   +    F  E   E+S++ TD+ +I  +N+
Sbjct: 1   MEIFIENI--QDKIEITDEILELMEKAIKMCLEHEKF--EYPYEVSIILTDNEKIREINY 56

Query: 73  EYRGIDKPTNVLSFPTA------FASSDGC-----SSLMLGDIVLAYEIIEIEANVLGKE 121
           E R IDKPT+VLSFP          SS G        ++LGDI+++ E  + ++   G  
Sbjct: 57  EQRNIDKPTDVLSFPIVDMYDGVIKSSQGDFDLDEGRIILGDILISMEKAKEQSMEYGHS 116

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           FE  L+ L+ HG  HLLGYDH   +    M   + +IL+ L +
Sbjct: 117 FERELIFLLTHGVFHLLGYDHDTPEREKKMFEKQEAILKSLNL 159


>gi|146296844|ref|YP_001180615.1| hypothetical protein Csac_1839 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166980486|sp|A4XKI9|RRMF_CALS8 RecName: Full=Probable rRNA maturation factor
 gi|145410420|gb|ABP67424.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 158

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 10/126 (7%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC---------SSL 99
           F+ +   E+S++  D+  I+ LN  YR IDK T+VLSFP  F   +G            +
Sbjct: 33  FMDDENYEISVMIVDNQFIKELNKHYRSIDKETDVLSFPI-FEFKNGELQEDIAIVEEEI 91

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LGDIV++ E    +A   G   E  + +L +H  LHLLG+DH++++D  +M   E  +L
Sbjct: 92  PLGDIVISIEKAYEQAKEFGHSVEREIAYLTVHSVLHLLGFDHIEEEDRMLMRKYEEMVL 151

Query: 160 EDLGIN 165
           E +G+ 
Sbjct: 152 EGMGLT 157


>gi|261380097|ref|ZP_05984670.1| putative metalloprotease [Neisseria subflava NJ9703]
 gi|284797315|gb|EFC52662.1| putative metalloprotease [Neisseria subflava NJ9703]
          Length = 171

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 14/125 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------PTAFASSDGCSSLMLGDIVL 106
            ++SL+  D       N +YRG D  TNVLSF        P  F  SDG    + GD+V+
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQF--SDG----LYGDLVI 104

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
             +++  EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +
Sbjct: 105 CPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPN 164

Query: 167 PYEVD 171
           PY+ D
Sbjct: 165 PYQED 169


>gi|225629632|ref|ZP_03787634.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591515|gb|EEH12553.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 97

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 4/97 (4%)

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN ++R +DKPTNVLSFP    S++      LGDI ++ + I+ E++        H+ H
Sbjct: 1   QLNLKFREMDKPTNVLSFPYEQWSNESD----LGDIAISIDSIKRESHEYYIPILAHIAH 56

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +++HG  HLLGYDH    +  +M+ LER IL  LG N
Sbjct: 57  MLVHGLRHLLGYDHPKKDEEIIMKNLEREILASLGYN 93


>gi|261855782|ref|YP_003263065.1| hypothetical protein Hneap_1182 [Halothiobacillus neapolitanus c2]
 gi|261836251|gb|ACX96018.1| protein of unknown function UPF0054 [Halothiobacillus neapolitanus
           c2]
          Length = 161

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 9/124 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLA 107
           V L++ F D     +LN +YR     TNVLSF       P   AS D    + LGD+++ 
Sbjct: 40  VALTVRFVDEEEGLSLNQQYRHKKYATNVLSFSYDAPELPEDMASGD--EPVYLGDLLIC 97

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
             ++  EA    K    H  HL++HG LHLLGYDH    +A  ME +E   ++ LG  +P
Sbjct: 98  MPVVLNEAASQNKIPATHTAHLVVHGVLHLLGYDHEASAEADQMEQIEVDAMQKLGFENP 157

Query: 168 YEVD 171
           Y  D
Sbjct: 158 YSAD 161


>gi|187925304|ref|YP_001896946.1| hypothetical protein Bphyt_3331 [Burkholderia phytofirmans PsJN]
 gi|238689582|sp|B2SYI7|RRMF_BURPP RecName: Full=Probable rRNA maturation factor
 gi|187716498|gb|ACD17722.1| protein of unknown function UPF0054 [Burkholderia phytofirmans
           PsJN]
          Length = 153

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++ F D+    TLN  YRG D  TNVL+F  A+A S+     + GD++L   ++E EA
Sbjct: 44  ELTVRFVDADEGRTLNRTYRGKDYSTNVLTF--AYAESE--DDPVTGDLILCCPVVEKEA 99

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              GK    H  HL++HG LH  GYDH  +++A  ME +E  IL  LG  DPY+
Sbjct: 100 AEQGKPLIAHYAHLLVHGTLHAQGYDHEVEEEAEEMEAIETEILAKLGFPDPYQ 153


>gi|289548111|ref|YP_003473099.1| hypothetical protein Thal_0337 [Thermocrinis albus DSM 14484]
 gi|289181728|gb|ADC88972.1| protein of unknown function UPF0054 [Thermocrinis albus DSM 14484]
          Length = 161

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 3/88 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VELSL  T    I  LN EYRG DKPT+VLSFP         S  +LGDIV++++  + +
Sbjct: 38  VELSLYITTDQVIRELNREYRGKDKPTDVLSFPIG---EKVGSFTLLGDIVISWDTAKKQ 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A   G   E  +  L +HG +HLLGYDH
Sbjct: 95  AKEYGHSTEEEIKRLALHGLVHLLGYDH 122


>gi|238927459|ref|ZP_04659219.1| metal-dependent hydrolase [Selenomonas flueggei ATCC 43531]
 gi|238884741|gb|EEQ48379.1| metal-dependent hydrolase [Selenomonas flueggei ATCC 43531]
          Length = 153

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEII 111
           E+S+  T+   I  LN +YRG+D+PT+VLSF    +      D    ++LGD+V++ E  
Sbjct: 39  EVSVTLTNDAHIHVLNRDYRGVDRPTDVLSFALTESEEPEIIDAPCGVVLGDLVISLERA 98

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +A   G  F   L  L +HG LHLLGYDH+++++   ME  +R +++ LGI
Sbjct: 99  AAQAEEYGHSFLRELSFLTVHGMLHLLGYDHIEEEERLEMEEEQRHVMDALGI 151


>gi|225075411|ref|ZP_03718610.1| hypothetical protein NEIFLAOT_00416 [Neisseria flavescens
           NRL30031/H210]
 gi|224953229|gb|EEG34438.1| hypothetical protein NEIFLAOT_00416 [Neisseria flavescens
           NRL30031/H210]
          Length = 171

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 14/125 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------PTAFASSDGCSSLMLGDIVL 106
            ++SL+  D       N +YRG D  TNVLSF        P  F  SDG    + GD+V+
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQF--SDG----LYGDLVI 104

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
             +++  EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +
Sbjct: 105 CPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPN 164

Query: 167 PYEVD 171
           PY+ D
Sbjct: 165 PYQED 169


>gi|313114170|ref|ZP_07799722.1| conserved hypothetical protein TIGR00043 [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310623579|gb|EFQ06982.1| conserved hypothetical protein TIGR00043 [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 163

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS------SDGCSSLMLGDIV 105
           E   E+S+ F D+  I  LN +YR    PT+VLSFP           ++GC   MLGDIV
Sbjct: 38  EAPAEISVTFVDNAAIAELNNQYRNKPMPTDVLSFPLGVNGKYDVDENNGCK--MLGDIV 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGI 164
           ++ E  + +AN+ G   +  +  L +H  LHLLGYDH +   +A  M   E ++L  LG+
Sbjct: 96  ISMERAQEQANLYGHPLQREVAFLTVHSMLHLLGYDHENGGLEAMRMREKEEAVLLQLGL 155


>gi|172037802|ref|YP_001804303.1| hypothetical protein cce_2889 [Cyanothece sp. ATCC 51142]
 gi|171699256|gb|ACB52237.1| hypothetical protein cce_2889 [Cyanothece sp. ATCC 51142]
          Length = 170

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSL 99
            Y    +  EL+L  T    I +LN +YR  ++PT+VL+F       P      D    L
Sbjct: 46  SYLPVASTYELTLRLTGDQEIHSLNAQYRQKNQPTDVLAFATLEWDFPKITDEPDSSEPL 105

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +GDI+++ E  + +A   G   +  L  L  HGFLHLLG+DH D++    M   + ++L
Sbjct: 106 YIGDIIISVETAQKQAQQQGHSLQRELPWLASHGFLHLLGWDHPDEQSLQKMLQQQETLL 165

Query: 160 EDLGI 164
           + +G+
Sbjct: 166 KIVGL 170


>gi|312110181|ref|YP_003988497.1| hypothetical protein GY4MC1_1074 [Geobacillus sp. Y4.1MC1]
 gi|311215282|gb|ADP73886.1| protein of unknown function UPF0054 [Geobacillus sp. Y4.1MC1]
          Length = 156

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAY 108
            E+ + F D+ RI  +N +YRG D+PT+V+SF                + L+LGDI+++ 
Sbjct: 39  AEVGVSFVDNERIRIINRDYRGKDQPTDVISFALEEKGEGEIEIVGADAPLLLGDIIISI 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              + +A   G  F   L  L +HGFLHLLGYDH  +++  +M   ++ ILE  G+ 
Sbjct: 99  PKAKEQAEEYGHSFMRELGFLAVHGFLHLLGYDHKTEEEEKIMFSKQKDILERYGLT 155


>gi|255994494|ref|ZP_05427629.1| putative metalloprotease [Eubacterium saphenum ATCC 49989]
 gi|255993207|gb|EEU03296.1| putative metalloprotease [Eubacterium saphenum ATCC 49989]
          Length = 178

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 10/118 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------CSSLMLGDI 104
           +E+S+ F     I+ LN +YRG D  T+VLSFP      +           C  +MLGD+
Sbjct: 59  IEVSVSFVSEDSIKQLNLDYRGKDSITDVLSFPMISTREEFNPEYDVDLGFCDKIMLGDV 118

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           V+       +A  +G+     +V+L IH  LHLLG DH+D+ D  +M   E+ +++ L
Sbjct: 119 VICLARASKQAADIGQSLSREVVYLFIHSVLHLLGMDHIDEADKEMMRSFEKKVVKKL 176


>gi|319761297|ref|YP_004125234.1| hypothetical protein Alide_0577 [Alicycliphilus denitrificans BC]
 gi|317115858|gb|ADU98346.1| protein of unknown function UPF0054 [Alicycliphilus denitrificans
           BC]
          Length = 150

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 17/120 (14%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----PTAFASSDGCSSLMLGDIVLAYE 109
            E+++    S     LN E+R  D  TNVL+F     PT           +L D+VL   
Sbjct: 40  AEITVRIVGSEEGRRLNREFRRKDYATNVLTFDYQQEPT-----------VLADLVLCAP 88

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           ++E EA   GK  + H  HL++HG LH  G+DH   ++DA  ME  E  I+ +LG  DPY
Sbjct: 89  VVEREAREQGKTLQEHYAHLLVHGALHAQGWDHETGEQDAQEMEAYETEIMRELGFADPY 148


>gi|330823171|ref|YP_004386474.1| metalloprotease ybeY [Alicycliphilus denitrificans K601]
 gi|329308543|gb|AEB82958.1| metalloprotease ybeY [Alicycliphilus denitrificans K601]
          Length = 150

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++    S     LN E+R  D  TNVL+F      +      +L D+VL   ++E E
Sbjct: 40  AEITVRIVGSEEGRRLNREFRRKDYATNVLTFDYQQEPT------VLADLVLCAPVVERE 93

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A   GK  + H  HL++HG LH  G+DH   ++DA  ME  E  I+ +LG  DPY
Sbjct: 94  AREQGKTLQEHYAHLLVHGALHAQGWDHETGEQDAQEMEAYETEIMRELGFADPY 148


>gi|225378120|ref|ZP_03755341.1| hypothetical protein ROSEINA2194_03780 [Roseburia inulinivorans DSM
           16841]
 gi|225210121|gb|EEG92475.1| hypothetical protein ROSEINA2194_03780 [Roseburia inulinivorans DSM
           16841]
          Length = 165

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 16/125 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSSL 99
           E++L   D+  I  +N E+R ID+PT+VLSFP     + G                   +
Sbjct: 39  EVNLTLVDNEGIHAINKEFREIDRPTDVLSFPMLSYENAGDFSKLEDDYDDNFNPDTGEI 98

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           MLGDIV++ + +  +A   G   +     LI+H  LHL GYDH+  ++A VME  ++ IL
Sbjct: 99  MLGDIVISVDKVLEQAESYGHTTKREYAFLIVHSMLHLFGYDHMTPEEAAVMEAKQKQIL 158

Query: 160 EDLGI 164
           +++ I
Sbjct: 159 DEMNI 163


>gi|328465884|gb|EGF37067.1| hypothetical protein AAULH_07516 [Lactobacillus helveticus MTCC
           5463]
          Length = 174

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N +E+S+ F D +R   +N +YR  D+PT+V+SF    A  DG  ++ L 
Sbjct: 31  LLAKKEIGKDNNLEMSINFVDEYRSHEINLKYRDKDRPTDVISF----AIQDGEDAIDLS 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I+  +   G  F+    + ++HGFLHL GYDH+   +A 
Sbjct: 87  AFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFGYTVVHGFLHLNGYDHIKPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LE+ G+
Sbjct: 147 EMFGIQGKVLEECGL 161


>gi|289523170|ref|ZP_06440024.1| putative metalloprotease [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503713|gb|EFD24877.1| putative metalloprotease [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 166

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 6/103 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAY 108
           +E+SL      R++ LN  +RGID+PT+VLSFP        C        + LGDIV+  
Sbjct: 48  IEISLTLLGPERMQELNKRHRGIDEPTDVLSFPLWEEEGTFCMPEEIAGEVSLGDIVICP 107

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
            ++   A VLGK  E  L  + +HG LHLLGYDH   ++  +M
Sbjct: 108 YVVAENARVLGKNPEEELKLIYVHGLLHLLGYDHATLEEEAIM 150


>gi|261366880|ref|ZP_05979763.1| putative metalloprotease [Subdoligranulum variabile DSM 15176]
 gi|282570994|gb|EFB76529.1| putative metalloprotease [Subdoligranulum variabile DSM 15176]
          Length = 166

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGCSSLMLGDIV 105
           E   E+S+ F D+HRI  LN +YR  D  T+VLSFP            +GC   +LGDIV
Sbjct: 38  EGSAEISVTFVDNHRIHELNKQYRDKDSATDVLSFPMGENGEYDIDEDNGCK--ILGDIV 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGI 164
           ++ E    +A + G   +  + +L +H  LHLLGYDH     +A  M   E ++L  LG+
Sbjct: 96  ISMERAMEQAELYGHSLQREVAYLTVHSMLHLLGYDHEASGLEAVRMREKEEAVLIKLGL 155


>gi|70726347|ref|YP_253261.1| hypothetical protein SH1346 [Staphylococcus haemolyticus JCSC1435]
 gi|123660334|sp|Q4L6S0|RRMF_STAHJ RecName: Full=Probable rRNA maturation factor
 gi|68447071|dbj|BAE04655.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 153

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 3/113 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEII 111
            ELS+ F D + I+ +N  YR  DK T+V+SF       +     M   LGDI++   + 
Sbjct: 38  AELSVTFVDKNEIQEINKTYRDKDKVTDVISFALEEDEPEIVGLDMPRVLGDIIICTNVA 97

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E +A+  G  FE  L  L +HGFLHLLGYDH++++D  VM   + +IL   G+
Sbjct: 98  EEQADSFGHSFERELGFLALHGFLHLLGYDHMNEEDEKVMFSRQDTILNAYGL 150


>gi|304388236|ref|ZP_07370356.1| metal-dependent hydrolase [Neisseria meningitidis ATCC 13091]
 gi|304337763|gb|EFM03912.1| metal-dependent hydrolase [Neisseria meningitidis ATCC 13091]
          Length = 211

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 91  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 150

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 151 KEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 209


>gi|242242843|ref|ZP_04797288.1| possible metal-dependent hydrolase [Staphylococcus epidermidis
           W23144]
 gi|242233706|gb|EES36018.1| possible metal-dependent hydrolase [Staphylococcus epidermidis
           W23144]
          Length = 155

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 51  KENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLG 102
           KENI    ELS+   D   I+ +N  YR  DK T+V+SF           +D     +LG
Sbjct: 31  KENIHNDAELSVTLVDKEEIQNINKVYRDKDKVTDVISFALEEDEPEIDFNDFDIPRVLG 90

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI++  ++ + +A   G  FE  L  L +HGFLHLLGYDH++D D   M G + +IL + 
Sbjct: 91  DIIICTDVAKEQAESYGHSFERELGFLALHGFLHLLGYDHMNDNDEKEMFGRQDAILNEF 150

Query: 163 GI 164
           G+
Sbjct: 151 GL 152


>gi|153953547|ref|YP_001394312.1| metalloprotease [Clostridium kluyveri DSM 555]
 gi|219854169|ref|YP_002471291.1| hypothetical protein CKR_0826 [Clostridium kluyveri NBRC 12016]
 gi|189040636|sp|A5N6N3|RRMF_CLOK5 RecName: Full=Probable rRNA maturation factor
 gi|254806620|sp|B9E052|RRMF_CLOK1 RecName: Full=Probable rRNA maturation factor
 gi|146346428|gb|EDK32964.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219567893|dbj|BAH05877.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 164

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 21/124 (16%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------------------TAFASSDGC 96
           E+S+VF D+  I+ +N E R ID+ T+VLSFP                     +  +DG 
Sbjct: 39  EISVVFVDNENIKDINRENRNIDRVTDVLSFPMLEYPESKVFKEVYLNYKFPEYDMNDG- 97

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            +L+LGDIV++ E  E ++   G  F     +LI+H  LHLLGYDH +D D  +M   E 
Sbjct: 98  -NLVLGDIVVSLEKCEEQSREFGHSFFRETCYLIVHSVLHLLGYDHTEDSDKKIMREREE 156

Query: 157 SILE 160
            IL+
Sbjct: 157 YILK 160


>gi|210612672|ref|ZP_03289420.1| hypothetical protein CLONEX_01622 [Clostridium nexile DSM 1787]
 gi|210151474|gb|EEA82482.1| hypothetical protein CLONEX_01622 [Clostridium nexile DSM 1787]
          Length = 164

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 15/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS---------------L 99
            E++L+ T +  I+ +N  +RGID+ T+VLSFP     + G  S               L
Sbjct: 38  AEVNLLLTMNDEIQEMNRNFRGIDRATDVLSFPMVDYETAGSFSFLEDALEYFNPESGEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           MLGDIV++ E +  +A   G   E     LI H  LHL G+DH+++++  VME  +  IL
Sbjct: 98  MLGDIVISKEKVVSQAEEYGHSIEREYAFLIAHSMLHLFGFDHMEEEERAVMERKQAEIL 157

Query: 160 EDLGI 164
           E L I
Sbjct: 158 ERLQI 162


>gi|331270001|ref|YP_004396493.1| hypothetical protein CbC4_1822 [Clostridium botulinum BKT015925]
 gi|329126551|gb|AEB76496.1| protein of unknown function UPF0054 [Clostridium botulinum
           BKT015925]
          Length = 166

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 73/145 (50%), Gaps = 18/145 (12%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------- 88
            K + N   K   VK N  E+S++F D+  I+ +N E R IDK T+VLSFP         
Sbjct: 21  VKEIINYTLKEEEVKVN-TEVSVIFIDNSTIKEINKETRDIDKVTDVLSFPMLDYLQGKI 79

Query: 89  --------AF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
                    F AS      L+LGDIVL+ E  E ++   G  F   + +L +H  LHLLG
Sbjct: 80  YKETYKDYEFDASYLDEGELVLGDIVLSLERAEEQSKDFGHSFLREVCYLTVHSVLHLLG 139

Query: 140 YDHVDDKDACVMEGLERSILEDLGI 164
           YDH++++D   M   E  ILE   I
Sbjct: 140 YDHMEEEDKVRMRKREEEILEKFSI 164


>gi|163791431|ref|ZP_02185840.1| hypothetical protein CAT7_03124 [Carnobacterium sp. AT7]
 gi|159873295|gb|EDP67390.1| hypothetical protein CAT7_03124 [Carnobacterium sp. AT7]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 10/120 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCSSLMLGDI 104
            E+S+ F D+  I+ +N  YRG D+PT+V+SF             F   D      +GDI
Sbjct: 37  TEMSVTFVDNENIQKINKTYRGKDQPTDVISFAIEDEVEDELMINFDELDEPMPRNIGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ +    +A      F+  L  L +HGFLHL GYDH++ +D   M GL++ ILE  G+
Sbjct: 97  IISVDKTASQAKEYNHSFDRELGFLALHGFLHLNGYDHMNPEDEKEMFGLQKEILEAYGL 156


>gi|121634333|ref|YP_974578.1| hypothetical protein NMC0477 [Neisseria meningitidis FAM18]
 gi|166227285|sp|A1KSE7|RRMF_NEIMF RecName: Full=Probable rRNA maturation factor
 gi|120866039|emb|CAM09777.1| hypothetical protein NMC0477 [Neisseria meningitidis FAM18]
 gi|325131788|gb|EGC54489.1| hypothetical protein TIGR00043 [Neisseria meningitidis M6190]
 gi|325137678|gb|EGC60255.1| hypothetical protein TIGR00043 [Neisseria meningitidis ES14902]
          Length = 171

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 111 KEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 169


>gi|291563244|emb|CBL42060.1| conserved hypothetical protein TIGR00043 [butyrate-producing
           bacterium SS3/4]
          Length = 165

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 16/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++++ TD+  I  +N + RGID PT+VLSFP     + G                   
Sbjct: 38  AEVNVLLTDNAGIHQINLDMRGIDNPTDVLSFPMCDFETPGDFSHLEETPEEYFDPDTGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L++GDIV++ + ++ +A   G      L  L+ H  LHL GYDH++D +   ME ++R I
Sbjct: 98  LLMGDIVISVDKVKEQAEKYGHSQTRELAFLVAHSMLHLSGYDHMEDDERIQMEDMQREI 157

Query: 159 LEDLG 163
           LE  G
Sbjct: 158 LERRG 162


>gi|261393091|emb|CAX50688.1| conserved hypothetical protein [Neisseria meningitidis 8013]
 gi|325202673|gb|ADY98127.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           M01-240149]
 gi|325203629|gb|ADY99082.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           M01-240355]
 gi|325207581|gb|ADZ03033.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           NZ-05/33]
          Length = 171

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 111 KEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 169


>gi|253732223|ref|ZP_04866388.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253724012|gb|EES92741.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 155

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDGCSSLMLGDI 104
           E+  ELS+ F D   I+ +N  YR  DK T+V+SF          F+  D     +LGDI
Sbjct: 35  EDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLD--IPRVLGDI 92

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL   G+
Sbjct: 93  IICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGL 152

Query: 165 N 165
            
Sbjct: 153 T 153


>gi|21283251|ref|NP_646339.1| hypothetical protein MW1522 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486405|ref|YP_043626.1| hypothetical protein SAS1508 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|253733180|ref|ZP_04867345.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|300911792|ref|ZP_07129235.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|26006922|sp|Q8NWB4|RRMF_STAAW RecName: Full=Probable rRNA maturation factor
 gi|56749708|sp|Q6G8Z7|RRMF_STAAS RecName: Full=Probable rRNA maturation factor
 gi|21204691|dbj|BAB95387.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244848|emb|CAG43309.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|253728720|gb|EES97449.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|300886038|gb|EFK81240.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 155

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDGCSSLMLGDI 104
           E+  ELS+ F D   I+ +N  YR  DK T+V+SF          F+  D     +LGDI
Sbjct: 35  EDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLD--IPRVLGDI 92

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL   G+
Sbjct: 93  IICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGL 152

Query: 165 N 165
            
Sbjct: 153 T 153


>gi|297207711|ref|ZP_06924146.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|296887728|gb|EFH26626.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
          Length = 155

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDGCSSLMLGDI 104
           E+  ELS+ F D   I+ +N  YR  DK T+V+SF          F+  D     +LGDI
Sbjct: 35  EDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDVPEIDFSGLD--IPRVLGDI 92

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL   G+
Sbjct: 93  IICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGL 152

Query: 165 N 165
            
Sbjct: 153 T 153


>gi|152981675|ref|YP_001352119.1| hypothetical protein mma_0429 [Janthinobacterium sp. Marseille]
 gi|172049086|sp|A6SV22|RRMF_JANMA RecName: Full=Probable rRNA maturation factor
 gi|151281752|gb|ABR90162.1| Hypothetical protein mma_0429 [Janthinobacterium sp. Marseille]
          Length = 152

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            +++L F D+   + LN  YRG D  TNVL+F     + D  S     DI+L  +++++E
Sbjct: 39  AQITLRFVDAAEGKDLNRNYRGKDYATNVLTFAY---TEDEDSETTQADIILCTDVLQLE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A    K  E H  HL++HG LH  GYDH  D++A  ME LE  IL DLG  +PY
Sbjct: 96  AAEQEKSVEEHAAHLVVHGVLHAQGYDHESDEEAEEMEALEIEILADLGFRNPY 149


>gi|313897363|ref|ZP_07830906.1| translation metalloprotein YbeY [Clostridium sp. HGF2]
 gi|312957733|gb|EFR39358.1| translation metalloprotein YbeY [Clostridium sp. HGF2]
          Length = 155

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----LGDIVL 106
           E +   S++F     I  +N +YRGID+PT+V+SF  A   S+    +M     LGDI +
Sbjct: 35  EGLRSASVIFVTPQMIHEMNRDYRGIDRPTDVISF--AMKDSEDAYEVMEGEEELGDIFI 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             E I  +A   G      +  L  HG LHLLGYDH+  +D  VM  L+  IL+D+
Sbjct: 93  NIEAISAQAADYGHSLRREVCFLFTHGLLHLLGYDHMTPEDEAVMFQLQDVILDDI 148


>gi|227513293|ref|ZP_03943342.1| metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577]
 gi|227083494|gb|EEI18806.1| metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577]
          Length = 161

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 12/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML------------G 102
            E+S+   +++ I  +N EYRG+D+ T+V+SF     + D    +++            G
Sbjct: 38  TEMSVTLVNNNEIHKINREYRGVDRATDVISFAIEDEAEDDDFPIVMDEDMQESIPENIG 97

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI ++ + +  +A+ LG  F+  L  L++HGFLHL GYDH++  DA +M  L++ IL   
Sbjct: 98  DIFVSVDKVAEQADYLGHSFQRELGFLVVHGFLHLNGYDHMEKADADIMFPLQKEILNAY 157

Query: 163 GI 164
           G+
Sbjct: 158 GL 159


>gi|226311650|ref|YP_002771544.1| hypothetical protein BBR47_20630 [Brevibacillus brevis NBRC 100599]
 gi|254801535|sp|C0ZB81|RRMF_BREBN RecName: Full=Probable rRNA maturation factor
 gi|226094598|dbj|BAH43040.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 159

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 11/121 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---------FASSDGCSSL--MLGDI 104
           E+ +   ++ RI  LN +YRG+D+PT+VLSF            F   D  S    MLGDI
Sbjct: 38  EVVVTLVNNERIHELNRDYRGVDRPTDVLSFAMNEPGEGEMEIFIDEDEASEFPNMLGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++      +A   G  FE  L  L +HGFLHLLGYDH   ++   M   +  +LE++G+
Sbjct: 98  IISVPKAHEQAEDYGHSFERELGFLTVHGFLHLLGYDHGTPEEEKEMFSRQEKVLEEIGL 157

Query: 165 N 165
            
Sbjct: 158 T 158


>gi|119493099|ref|ZP_01624024.1| hypothetical protein L8106_27841 [Lyngbya sp. PCC 8106]
 gi|119452844|gb|EAW34019.1| hypothetical protein L8106_27841 [Lyngbya sp. PCC 8106]
          Length = 196

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 8/117 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------AFASSDGCSSLMLGDIVLA 107
           EL+L  TD+  I+ LN +YR +D PT+VL+F T          +      SL LGD+V++
Sbjct: 69  ELNLRLTDNTEIQQLNAQYRSLDVPTDVLAFATLEVGFPKLPASEMKASQSLDLGDLVIS 128

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            E    +A   G   +  L  L  HGFLHLLG+DH DD+    M   +  +L+ +G+
Sbjct: 129 VETAARQAQQQGHSLKIELGWLAAHGFLHLLGWDHPDDRTLIQMLDQQVIMLQSVGL 185


>gi|325135872|gb|EGC58484.1| hypothetical protein TIGR00043 [Neisseria meningitidis M0579]
          Length = 171

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 111 KEAAEQGKTPERHFTHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 169


>gi|37520812|ref|NP_924189.1| putative metalloprotease [Gloeobacter violaceus PCC 7421]
 gi|46577366|sp|Q7NL83|RRMF_GLOVI RecName: Full=Probable rRNA maturation factor
 gi|35211807|dbj|BAC89184.1| gll1243 [Gloeobacter violaceus PCC 7421]
          Length = 194

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-----SLMLGDIVLAYE 109
           VEL+L  TD   I  LN  +RG+D PT+VLSF   F + D  +      L LGDIV++  
Sbjct: 71  VELTLRLTDDAEIRRLNARFRGVDAPTDVLSF--EFEADDTQALIAEEPLYLGDIVVSVP 128

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               +A   G   E  L  L +HG LHLLG+DH D++    M   +  +L+  G+N  Y+
Sbjct: 129 TATRQAREFGHTLEVELAWLAVHGLLHLLGWDHPDEQSWRAMVTQQARLLK--GVNVVYD 186


>gi|15924560|ref|NP_372094.1| hypothetical protein SAV1570 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927150|ref|NP_374683.1| hypothetical protein SA1399 [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651963|ref|YP_186467.1| hypothetical protein SACOL1627 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160129|ref|YP_494225.1| hypothetical protein SAUSA300_1530 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195379|ref|YP_500183.1| hypothetical protein SAOUHSC_01672 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268054|ref|YP_001246997.1| hypothetical protein SaurJH9_1628 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394122|ref|YP_001316797.1| hypothetical protein SaurJH1_1662 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221685|ref|YP_001332507.1| hypothetical protein NWMN_1473 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156979888|ref|YP_001442147.1| hypothetical protein SAHV_1557 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509798|ref|YP_001575457.1| hypothetical protein USA300HOU_1571 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221140010|ref|ZP_03564503.1| hypothetical protein SauraJ_00070 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253316045|ref|ZP_04839258.1| hypothetical protein SauraC_07852 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255006356|ref|ZP_05144957.2| hypothetical protein SauraM_07805 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257793646|ref|ZP_05642625.1| metalloprotease [Staphylococcus aureus A9781]
 gi|258411054|ref|ZP_05681334.1| metalloprotease [Staphylococcus aureus A9763]
 gi|258420142|ref|ZP_05683097.1| metalloprotease [Staphylococcus aureus A9719]
 gi|258437402|ref|ZP_05689386.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443608|ref|ZP_05691947.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258446815|ref|ZP_05694969.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258448729|ref|ZP_05696841.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258450601|ref|ZP_05698663.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258453546|ref|ZP_05701524.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262049144|ref|ZP_06022021.1| hypothetical protein SAD30_0301 [Staphylococcus aureus D30]
 gi|262051230|ref|ZP_06023454.1| hypothetical protein SA930_1661 [Staphylococcus aureus 930918-3]
 gi|269203198|ref|YP_003282467.1| hypothetical protein SAAV_1562 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893071|ref|ZP_06301305.1| metalloprotease [Staphylococcus aureus A8117]
 gi|282920119|ref|ZP_06327844.1| metalloprotease [Staphylococcus aureus A9765]
 gi|282928203|ref|ZP_06335808.1| metalloprotease [Staphylococcus aureus A10102]
 gi|284024629|ref|ZP_06379027.1| hypothetical protein Saura13_08560 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294848601|ref|ZP_06789347.1| metalloprotease [Staphylococcus aureus A9754]
 gi|295406693|ref|ZP_06816498.1| metalloprotease [Staphylococcus aureus A8819]
 gi|296275808|ref|ZP_06858315.1| hypothetical protein SauraMR_05652 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297245725|ref|ZP_06929590.1| metalloprotease [Staphylococcus aureus A8796]
 gi|304380841|ref|ZP_07363501.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54040164|sp|P67137|RRMF_STAAN RecName: Full=Probable rRNA maturation factor
 gi|54042633|sp|P67136|RRMF_STAAM RecName: Full=Probable rRNA maturation factor
 gi|62901407|sp|Q5HFJ0|RRMF_STAAC RecName: Full=Probable rRNA maturation factor
 gi|122539405|sp|Q2FY02|RRMF_STAA8 RecName: Full=Probable rRNA maturation factor
 gi|123485628|sp|Q2FGF3|RRMF_STAA3 RecName: Full=Probable rRNA maturation factor
 gi|166231407|sp|A7X2W8|RRMF_STAA1 RecName: Full=Probable rRNA maturation factor
 gi|172048907|sp|A6QHB3|RRMF_STAAE RecName: Full=Probable rRNA maturation factor
 gi|189038954|sp|A8Z4A9|RRMF_STAAT RecName: Full=Probable rRNA maturation factor
 gi|189038968|sp|A5IT98|RRMF_STAA9 RecName: Full=Probable rRNA maturation factor
 gi|189038976|sp|A6U242|RRMF_STAA2 RecName: Full=Probable rRNA maturation factor
 gi|13701368|dbj|BAB42662.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247341|dbj|BAB57732.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|57286149|gb|AAW38243.1| conserved hypothetical protein TIGR00043 [Staphylococcus aureus
           subsp. aureus COL]
 gi|87126103|gb|ABD20617.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202937|gb|ABD30747.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741123|gb|ABQ49421.1| protein of unknown function UPF0054 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946574|gb|ABR52510.1| protein of unknown function UPF0054 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150374485|dbj|BAF67745.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722023|dbj|BAF78440.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160368607|gb|ABX29578.1| hypothetical protein USA300HOU_1571 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|257787618|gb|EEV25958.1| metalloprotease [Staphylococcus aureus A9781]
 gi|257840204|gb|EEV64668.1| metalloprotease [Staphylococcus aureus A9763]
 gi|257843853|gb|EEV68247.1| metalloprotease [Staphylococcus aureus A9719]
 gi|257848607|gb|EEV72595.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257851014|gb|EEV74957.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257854390|gb|EEV77339.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257858007|gb|EEV80896.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257861759|gb|EEV84558.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257864277|gb|EEV87027.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|259160867|gb|EEW45887.1| hypothetical protein SA930_1661 [Staphylococcus aureus 930918-3]
 gi|259162813|gb|EEW47378.1| hypothetical protein SAD30_0301 [Staphylococcus aureus D30]
 gi|262075488|gb|ACY11461.1| hypothetical protein SAAV_1562 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941060|emb|CBI49444.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282590010|gb|EFB95092.1| metalloprotease [Staphylococcus aureus A10102]
 gi|282594467|gb|EFB99452.1| metalloprotease [Staphylococcus aureus A9765]
 gi|282764389|gb|EFC04515.1| metalloprotease [Staphylococcus aureus A8117]
 gi|285817252|gb|ADC37739.1| predicted metal-dependent hydrolase [Staphylococcus aureus
           04-02981]
 gi|294824627|gb|EFG41050.1| metalloprotease [Staphylococcus aureus A9754]
 gi|294968440|gb|EFG44464.1| metalloprotease [Staphylococcus aureus A8819]
 gi|297177376|gb|EFH36628.1| metalloprotease [Staphylococcus aureus A8796]
 gi|302751400|gb|ADL65577.1| putative metalloprotease [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340568|gb|EFM06502.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312829958|emb|CBX34800.1| uncharacterized protein family UPF0054 family protein
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129849|gb|EFT85839.1| hypothetical protein CGSSa03_02148 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315198734|gb|EFU29062.1| hypothetical protein CGSSa01_09439 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140545|gb|EFW32399.1| conserved hypothetical protein TIGR00043 [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320144082|gb|EFW35851.1| conserved hypothetical protein TIGR00043 [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|329314246|gb|AEB88659.1| Putative metalloprotease [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727414|gb|EGG63870.1| translation metalloprotein YbeY [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329728375|gb|EGG64812.1| translation metalloprotein YbeY [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 155

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDGCSSLMLGDI 104
           E+  ELS+ F D   I+ +N  YR  DK T+V+SF          F+  D     +LGDI
Sbjct: 35  EDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLD--IPRVLGDI 92

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL   G+
Sbjct: 93  IICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGL 152

Query: 165 N 165
            
Sbjct: 153 T 153


>gi|291545856|emb|CBL18964.1| conserved hypothetical protein TIGR00043 [Ruminococcus sp. SR1/5]
          Length = 164

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 15/125 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCS--------------SLM 100
           +++LV TD+  I+ +N E+R I  PT+VLSFP   F +    S               L+
Sbjct: 39  QVNLVLTDNEEIKRVNTEFRNIQAPTDVLSFPMIPFETPADYSVVEEDESYFDLDSDELL 98

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDI+++   +  +A   G         L+ H  LHLLGYDH+ + +A VME  + + L+
Sbjct: 99  LGDIMISVPKVFAQAEEYGHSVTREFCFLVAHSMLHLLGYDHMTEDEAKVMEAKQAAALK 158

Query: 161 DLGIN 165
           +LGIN
Sbjct: 159 ELGIN 163


>gi|254804422|ref|YP_003082643.1| hypothetical protein NMO_0420 [Neisseria meningitidis alpha14]
 gi|254667965|emb|CBA04232.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
          Length = 251

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 131 ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 190

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 191 KEAAEQGKTPERHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 249


>gi|315161671|gb|EFU05688.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0645]
          Length = 159

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 13/141 (9%)

Query: 38  KAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           K + NL+  + G+       E+S+ FTD+  I+ +N +YRG D PT+V+SF       D 
Sbjct: 18  KEIENLLQLAAGFLEIAEDTEMSVTFTDNAGIQVINRDYRGKDMPTDVISFALEDEGEDE 77

Query: 96  CSSLM-----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
              +            LGD++++ E    +A   G   E  +  L +HGFLHL GYDH++
Sbjct: 78  LPIIFDDEELAELPRNLGDLIISTERAAEQAFEYGHTLEREMGFLAVHGFLHLNGYDHME 137

Query: 145 DKDACVMEGLERSILEDLGIN 165
            +D   M GL++ IL+  G+ 
Sbjct: 138 PEDEKEMFGLQKEILDAYGLK 158


>gi|253576079|ref|ZP_04853411.1| cytidine deaminase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844422|gb|EES72438.1| cytidine deaminase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 165

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 14/123 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLML 101
           E++L F D   I  LN +YRGID+PT+VLSF    +  +                 + ML
Sbjct: 41  EVALTFVDDEAIHELNRDYRGIDRPTDVLSFAMNESLEEEPEIVYELEEDEELDDMTEML 100

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI+++ E  + ++   G   E  +  L +HGFLHLLGYDH D      M G + + L +
Sbjct: 101 GDIIISVERAKAQSEEYGHSLEREIGFLFVHGFLHLLGYDHQDAVSEAEMMGKQEAALAE 160

Query: 162 LGI 164
           +G+
Sbjct: 161 VGL 163


>gi|121595993|ref|YP_987889.1| hypothetical protein Ajs_3702 [Acidovorax sp. JS42]
 gi|145558816|sp|A1WC38|RRMF_ACISJ RecName: Full=Probable rRNA maturation factor
 gi|120608073|gb|ABM43813.1| protein of unknown function UPF0054 [Acidovorax sp. JS42]
          Length = 152

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++    +   + LN E+R  D  TNVL+F            + + D+VL   ++E E
Sbjct: 42  AEITVRIVGAEEGQRLNREFRHKDYATNVLTFDY------QQEPVAVADLVLCAPVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K  E H  HL++HG LH  G+DH   ++DA  ME  E +IL++LG  DPY
Sbjct: 96  AREQNKTLEEHYAHLLVHGTLHAQGWDHETSEQDAQEMEAYETAILQELGFADPY 150


>gi|254303748|ref|ZP_04971106.1| possible metal dependent hydrolase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323940|gb|EDK89190.1| possible metal dependent hydrolase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 162

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LSL+ T++  I+ +N EYR  D PT+V+SF  A+  ++  +      LGDI+++ E +E 
Sbjct: 50  LSLLLTNNENIQVINREYRDKDAPTDVISF--AYHETEDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +A+     FE    +++ HG LH+LGYDH+++ D  +M   E +IL   G
Sbjct: 108 QASEYNHSFEREFYYVLTHGILHILGYDHIEEDDKKLMREREEAILSSFG 157


>gi|309805177|ref|ZP_07699229.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           09V1-c]
 gi|329920078|ref|ZP_08276909.1| translation metalloprotein YbeY [Lactobacillus iners SPIN 1401G]
 gi|308165411|gb|EFO67642.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           09V1-c]
 gi|328936532|gb|EGG32976.1| translation metalloprotein YbeY [Lactobacillus iners SPIN 1401G]
          Length = 175

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-- 100
           L +K    K N  E+S+ F + ++I  +N  YRG D+PT+V+SF    A  DG  + +  
Sbjct: 31  LSAKKNIKKTNRQEMSINFVNINKIHEINKNYRGKDRPTDVISF----AIEDGTDNDLFA 86

Query: 101 -----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                      +GD+ +  E++E  A      F     + ++HG+LHL GYDH+ D +A 
Sbjct: 87  QFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFGYTLVHGYLHLNGYDHIQDDEAE 146

Query: 150 VMEGLERSILEDLGI 164
           VM G++  +LE+ G+
Sbjct: 147 VMFGIQSKVLEEYGL 161


>gi|25091585|sp|Q8K9C1|RRMF_BUCAP RecName: Full=Probable rRNA maturation factor
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD 103
           I K  + K+N+  +++   D   ++ +N +YRG +K TN+LSF   F      +  +LGD
Sbjct: 31  IKKVLYKKKNVNLINIRIVDEREMKNINLKYRGKNKSTNILSF--KFDLFINKNQTLLGD 88

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +VL  +IIE E+    K  E+   H+IIHG LHLLGYDH + K+  +ME +E  I+  L 
Sbjct: 89  LVLCKKIIEKESLKYQKTLESRWAHMIIHGTLHLLGYDHKNKKEKKIMEKIENKIMLFLN 148

Query: 164 INDPY 168
              PY
Sbjct: 149 YEKPY 153


>gi|300853994|ref|YP_003778978.1| hypothetical protein CLJU_c08080 [Clostridium ljungdahlii DSM
           13528]
 gi|300434109|gb|ADK13876.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 164

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 17/121 (14%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GCSS 98
           E+S++F D+  I+ +N E R IDK T+VLSFP                  F  SD    +
Sbjct: 39  EISVIFIDNEEIKNINRENRNIDKVTDVLSFPMLEYPEGSVFKQVYVNHEFEESDMDDGN 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDI L+ E  E +A   G  F     +L +H  LHLLGYDH+++ D  +M   E  I
Sbjct: 99  LVLGDIALSLERAEEQAQEFGHSFLREACYLTVHSVLHLLGYDHMEESDKKIMRQREEEI 158

Query: 159 L 159
           L
Sbjct: 159 L 159


>gi|256963579|ref|ZP_05567750.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|257079644|ref|ZP_05574005.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|294780924|ref|ZP_06746278.1| metalloprotein, YbeY family [Enterococcus faecalis PC1.1]
 gi|307270831|ref|ZP_07552119.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX4248]
 gi|307271518|ref|ZP_07552790.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0855]
 gi|312899841|ref|ZP_07759160.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0470]
 gi|256954075|gb|EEU70707.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|256987674|gb|EEU74976.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|294452050|gb|EFG20498.1| metalloprotein, YbeY family [Enterococcus faecalis PC1.1]
 gi|306511790|gb|EFM80788.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0855]
 gi|306512832|gb|EFM81476.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX4248]
 gi|311293091|gb|EFQ71647.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0470]
          Length = 159

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 13/141 (9%)

Query: 38  KAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           K + NL+  + G+       E+S+ FTD+  I+ +N +YRG D PT+V+SF       D 
Sbjct: 18  KEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQVINRDYRGKDMPTDVISFALEDEGEDE 77

Query: 96  CSSLM-----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
              +            LGD++++ E    +A   G   E  +  L +HGFLHL GYDH++
Sbjct: 78  LPIIFDDEELAELPRNLGDLIISTERAAEQAFEYGHTLEREMGFLAVHGFLHLNGYDHME 137

Query: 145 DKDACVMEGLERSILEDLGIN 165
            +D   M GL++ IL+  G+ 
Sbjct: 138 PEDEKEMFGLQKEILDAYGLK 158


>gi|241766518|ref|ZP_04764382.1| protein of unknown function UPF0054 [Acidovorax delafieldii 2AN]
 gi|241363251|gb|EER58810.1| protein of unknown function UPF0054 [Acidovorax delafieldii 2AN]
          Length = 152

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+   + LN +YR  D  TNVL+F  A         +++ D+VL   ++E E
Sbjct: 42  AEITVRIVDADEGQALNRDYRHKDYATNVLTFDYA------QEPVVMADLVLCAPVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K  E H  HL++HG LH  G+DH     DA  ME  E  IL+ LG  DPY
Sbjct: 96  AREQNKTLEEHYAHLLVHGTLHAQGWDHETSATDAEEMEAYETDILQALGFADPY 150


>gi|325143901|gb|EGC66213.1| hypothetical protein TIGR00043 [Neisseria meningitidis M01-240013]
 gi|325206610|gb|ADZ02063.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           M04-240196]
          Length = 171

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 111 KEAAEQGKTPERHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 169


>gi|227519870|ref|ZP_03949919.1| metalloprotease [Enterococcus faecalis TX0104]
 gi|229545167|ref|ZP_04433892.1| metalloprotease [Enterococcus faecalis TX1322]
 gi|229549416|ref|ZP_04438141.1| metalloprotease [Enterococcus faecalis ATCC 29200]
 gi|255972120|ref|ZP_05422706.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255975187|ref|ZP_05425773.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256617031|ref|ZP_05473877.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256763105|ref|ZP_05503685.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256853773|ref|ZP_05559138.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256956689|ref|ZP_05560860.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256961294|ref|ZP_05565465.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|257082010|ref|ZP_05576371.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|257084561|ref|ZP_05578922.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|257087443|ref|ZP_05581804.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|257416650|ref|ZP_05593644.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
 gi|257419866|ref|ZP_05596860.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257421946|ref|ZP_05598936.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|293383578|ref|ZP_06629488.1| putative metalloprotease [Enterococcus faecalis R712]
 gi|293387309|ref|ZP_06631865.1| putative metalloprotease [Enterococcus faecalis S613]
 gi|300860151|ref|ZP_07106238.1| translation metalloprotein YbeY [Enterococcus faecalis TUSoD Ef11]
 gi|307277154|ref|ZP_07558258.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX2134]
 gi|307285806|ref|ZP_07565940.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0860]
 gi|307287709|ref|ZP_07567752.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0109]
 gi|307290536|ref|ZP_07570448.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0411]
 gi|312906128|ref|ZP_07765140.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           DAPTO 512]
 gi|312909474|ref|ZP_07768329.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           DAPTO 516]
 gi|312953491|ref|ZP_07772331.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0102]
 gi|227072664|gb|EEI10627.1| metalloprotease [Enterococcus faecalis TX0104]
 gi|229305653|gb|EEN71649.1| metalloprotease [Enterococcus faecalis ATCC 29200]
 gi|229309712|gb|EEN75699.1| metalloprotease [Enterococcus faecalis TX1322]
 gi|255963138|gb|EET95614.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255968059|gb|EET98681.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256596558|gb|EEU15734.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256684356|gb|EEU24051.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256710716|gb|EEU25759.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256947185|gb|EEU63817.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256951790|gb|EEU68422.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256990040|gb|EEU77342.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256992591|gb|EEU79893.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|256995473|gb|EEU82775.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|257158478|gb|EEU88438.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
 gi|257161694|gb|EEU91654.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257163770|gb|EEU93730.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|291079090|gb|EFE16454.1| putative metalloprotease [Enterococcus faecalis R712]
 gi|291083207|gb|EFE20170.1| putative metalloprotease [Enterococcus faecalis S613]
 gi|295113466|emb|CBL32103.1| conserved hypothetical protein TIGR00043 [Enterococcus sp. 7L76]
 gi|300849190|gb|EFK76940.1| translation metalloprotein YbeY [Enterococcus faecalis TUSoD Ef11]
 gi|306498391|gb|EFM67896.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0411]
 gi|306501447|gb|EFM70750.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0109]
 gi|306502567|gb|EFM71834.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0860]
 gi|306506084|gb|EFM75250.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX2134]
 gi|310627774|gb|EFQ11057.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           DAPTO 512]
 gi|310628700|gb|EFQ11983.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0102]
 gi|311290147|gb|EFQ68703.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           DAPTO 516]
 gi|315025401|gb|EFT37333.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX2137]
 gi|315030209|gb|EFT42141.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX4000]
 gi|315032905|gb|EFT44837.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0017]
 gi|315035611|gb|EFT47543.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0027]
 gi|315144803|gb|EFT88819.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX2141]
 gi|315150149|gb|EFT94165.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0012]
 gi|315152158|gb|EFT96174.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0031]
 gi|315155345|gb|EFT99361.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0043]
 gi|315159079|gb|EFU03096.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0312]
 gi|315164808|gb|EFU08825.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX1302]
 gi|315166394|gb|EFU10411.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX1341]
 gi|315170290|gb|EFU14307.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX1342]
 gi|315173675|gb|EFU17692.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX1346]
 gi|327535697|gb|AEA94531.1| putative metalloprotease [Enterococcus faecalis OG1RF]
          Length = 159

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 13/141 (9%)

Query: 38  KAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           K + NL+  + G+       E+S+ FTD+  I+ +N +YRG D PT+V+SF       D 
Sbjct: 18  KEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQVINRDYRGKDMPTDVISFALEDEGEDE 77

Query: 96  CSSLM-----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
              +            LGD++++ E    +A   G   E  +  L +HGFLHL GYDH++
Sbjct: 78  LPIIFDDEELAELPRNLGDLIISTERAAEQAVEYGHTLEREMGFLAVHGFLHLNGYDHME 137

Query: 145 DKDACVMEGLERSILEDLGIN 165
            +D   M GL++ IL+  G+ 
Sbjct: 138 PEDEKEMFGLQKEILDAYGLK 158


>gi|29376907|ref|NP_816061.1| putative metalloprotease [Enterococcus faecalis V583]
 gi|227553943|ref|ZP_03983990.1| metalloprotease [Enterococcus faecalis HH22]
 gi|46577437|sp|Q831T7|RRMF_ENTFA RecName: Full=Probable rRNA maturation factor
 gi|29344372|gb|AAO82131.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           V583]
 gi|227176929|gb|EEI57901.1| metalloprotease [Enterococcus faecalis HH22]
 gi|315574356|gb|EFU86547.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0309B]
 gi|315580169|gb|EFU92360.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0309A]
          Length = 159

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 13/141 (9%)

Query: 38  KAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           K + NL+  + G+       E+S+ FTD+  I+ +N +YRG D PT+V+SF       D 
Sbjct: 18  KEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQMINRDYRGKDMPTDVISFALEDEGEDE 77

Query: 96  CSSLM-----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
              +            LGD++++ E    +A   G   E  +  L +HGFLHL GYDH++
Sbjct: 78  LPIIFDDEELAELPRNLGDLIISTERAAEQAVEYGHTLEREMGFLAVHGFLHLNGYDHME 137

Query: 145 DKDACVMEGLERSILEDLGIN 165
            +D   M GL++ IL+  G+ 
Sbjct: 138 PEDEKEMFGLQKEILDAYGLK 158


>gi|319935426|ref|ZP_08009863.1| metalloprotease [Coprobacillus sp. 29_1]
 gi|319809642|gb|EFW06055.1| metalloprotease [Coprobacillus sp. 29_1]
          Length = 153

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 9/149 (6%)

Query: 21  LWGDEIHL-RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           ++ DE+ L +   E  F K V   +   Y   E+ VELS +  D  RI  +N EYR ID+
Sbjct: 6   VYEDELKLSKDNYEQQFIKIVEAALQ--YLKIEDDVELSCIIVDDERIHEINKEYRNIDR 63

Query: 80  PTNVLSFPTAFASSD----GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
            T+V+SF  A   +D          LGDI ++Y    I+A       +  +  L  HG L
Sbjct: 64  STDVISF--ALEDNDQFYVAGMPRSLGDIFISYHHACIQAEEYQHTLKREMCFLFTHGLL 121

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HLLGYDH++++D   M  L++ IL  LGI
Sbjct: 122 HLLGYDHMNEEDEKEMFTLQKEILNQLGI 150


>gi|332799066|ref|YP_004460565.1| metalloprotease ybeY [Tepidanaerobacter sp. Re1]
 gi|332696801|gb|AEE91258.1| metalloprotease ybeY [Tepidanaerobacter sp. Re1]
          Length = 162

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 12/152 (7%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+I +    E +  KAV+  IS      +  +E+S+   D   I+ LN +YR +D+PT+V
Sbjct: 13  DKIDVTQKLEELINKAVNTAISVEKVSGD--LEVSIALVDDEYIQKLNRQYRSLDEPTDV 70

Query: 84  LSFP---TAF---ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           LSF    T F    S +     +LGD+V++ E  + +A   G  FE  +  L++HG LHL
Sbjct: 71  LSFAMRETVFEEGGSFEFQEEELLGDVVISLERAKEQAVEYGHSFEREVGFLVVHGILHL 130

Query: 138 LGYDHVDDKDACVMEGLERSILEDL----GIN 165
           LGYDH   ++  VM   E  IL+ +    GIN
Sbjct: 131 LGYDHEVGEEKVVMRQREEEILKAIDLTRGIN 162


>gi|315303203|ref|ZP_07873860.1| putative metalloprotease [Listeria ivanovii FSL F6-596]
 gi|313628430|gb|EFR96906.1| putative metalloprotease [Listeria ivanovii FSL F6-596]
          Length = 161

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 12/139 (8%)

Query: 38  KAVSNLIS--KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------ 89
           K V N++     Y   +   ELSL FT +  I  +N +YR  D+ T+V+SF         
Sbjct: 21  KLVENILQFXXDYLKMDQGTELSLTFTTNEGIREINRDYRNKDQATDVISFALEELGEGE 80

Query: 90  ----FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
               +A  D  +  MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++ 
Sbjct: 81  TEIDWADFDLETPKMLGDIIISTEKAEEQAKEYGHTKARELGFLAVHGLLHLLGYDHMEP 140

Query: 146 KDACVMEGLERSILEDLGI 164
            +  +M GL++ +L+  G+
Sbjct: 141 DEEKIMFGLQKEVLDAYGL 159


>gi|313608753|gb|EFR84572.1| putative metalloprotease [Listeria monocytogenes FSL F2-208]
          Length = 161

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 10/128 (7%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCS 97
           Y   E   ELSL FT +  I  +N EYR  D+ T+V+SF             +   D  +
Sbjct: 33  YLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLET 92

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +  VM GL++ 
Sbjct: 93  PRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKE 152

Query: 158 ILEDLGIN 165
           +L+  G+ 
Sbjct: 153 VLDAYGLE 160


>gi|329572232|gb|EGG53892.1| translation metalloprotein YbeY [Enterococcus faecalis TX1467]
          Length = 159

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 13/141 (9%)

Query: 38  KAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           K + NL+  + G+       E+S+ FTD+  I+ +N +YRG D PT+V+SF       D 
Sbjct: 18  KEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQVINRDYRGKDMPTDVISFALEDEGEDE 77

Query: 96  CSSLM-----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
              +            LGD++++ E    +A   G   E  +  L +HGF HL GYDH++
Sbjct: 78  LPIIFDDEELAELPRNLGDLIISTERAAEQAFEYGHTLEREMGFLAVHGFFHLNGYDHME 137

Query: 145 DKDACVMEGLERSILEDLGIN 165
            +D   M GL++ IL+  G+ 
Sbjct: 138 PEDEKAMFGLQKEILDAYGLK 158


>gi|225018653|ref|ZP_03707845.1| hypothetical protein CLOSTMETH_02603 [Clostridium methylpentosum
           DSM 5476]
 gi|224948561|gb|EEG29770.1| hypothetical protein CLOSTMETH_02603 [Clostridium methylpentosum
           DSM 5476]
          Length = 168

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 5/115 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----FASSDGCSSLMLGDIVLAYEI 110
            E+S+ F D+  I+ LN EYR  D PT+VLSFP      F  ++   + +LGDIVL+ E 
Sbjct: 42  AEVSVSFVDNADIQKLNSEYRQKDAPTDVLSFPLGENGEFDLNEETGAAVLGDIVLSMEK 101

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGI 164
              +A + G   +  + +L +H   HLLGYDH     +A  M   E ++L  LG+
Sbjct: 102 AYEQAEIYGHSLQREVAYLTVHSMFHLLGYDHEQGGLEAVRMREKEEAVLTSLGL 156


>gi|307266422|ref|ZP_07547958.1| protein of unknown function UPF0054 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918530|gb|EFN48768.1| protein of unknown function UPF0054 [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 159

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 10/120 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCSSLM---------LGDI 104
           VE+S+ F D+  I  LN  YRGIDKPT+VLSFP A F  +      +         +GDI
Sbjct: 38  VEVSVSFVDNEEIRKLNKYYRGIDKPTDVLSFPLAEFEDTYAEVEEIEEDSEEVQPIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           V++ E    ++   G  FE  + +L  H  LHLLGYDH  +++  +M   E  ++  L I
Sbjct: 98  VISLEKALEQSMEYGHSFEREVAYLTAHSMLHLLGYDHETEEERKIMREKEEEVMARLNI 157


>gi|262370521|ref|ZP_06063846.1| metal-dependent hydrolase [Acinetobacter johnsonii SH046]
 gi|262314321|gb|EEY95363.1| metal-dependent hydrolase [Acinetobacter johnsonii SH046]
          Length = 159

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 14/145 (9%)

Query: 38  KAVSNLISKGYFVK-----------ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +A   ++ +GY  K           ++  E+ +   D      LN EYRG DK TNVLSF
Sbjct: 12  QAPELVLKRGYLKKVVETVLRHIGTQSNCEIGIACVDHDESHKLNLEYRGKDKSTNVLSF 71

Query: 87  PTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-V 143
           P+      +    S  +GD+V+   ++ +EA    K    H  H+++HG LHL+GYDH  
Sbjct: 72  PSDLPDEMAQILDSFPIGDLVICIPVVLLEAKEQNKAPLTHFTHMLVHGTLHLMGYDHET 131

Query: 144 DDKDACVMEGLERSILEDLGINDPY 168
            + DA  MEG+E  IL  LG  +PY
Sbjct: 132 SEADAEEMEGIEIEILAKLGFENPY 156


>gi|309810260|ref|ZP_07704105.1| translation metalloprotein YbeY [Lactobacillus iners SPIN
           2503V10-D]
 gi|312871748|ref|ZP_07731836.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 3008A-a]
 gi|325912641|ref|ZP_08175024.1| translation metalloprotein YbeY [Lactobacillus iners UPII 60-B]
 gi|308169532|gb|EFO71580.1| translation metalloprotein YbeY [Lactobacillus iners SPIN
           2503V10-D]
 gi|311092690|gb|EFQ51046.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 3008A-a]
 gi|325478062|gb|EGC81191.1| translation metalloprotein YbeY [Lactobacillus iners UPII 60-B]
          Length = 175

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-- 100
           L +K    K N  E+S+ F D +++  +N  YRG D+PT+V+SF    A  DG  + +  
Sbjct: 31  LSAKKNIKKTNRQEMSINFVDINKMHEINKNYRGKDRPTDVISF----AIEDGIDNDLFA 86

Query: 101 -----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                      +GD+ +  E++E  A      F     + ++HG+LHL GYDH+ D +A 
Sbjct: 87  QFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFGYTLVHGYLHLNGYDHIKDDEAE 146

Query: 150 VMEGLERSILEDLGI 164
           VM G++  +LE+ G+
Sbjct: 147 VMFGIQSKVLEEYGL 161


>gi|217964389|ref|YP_002350067.1| hypothetical protein LMHCC_1105 [Listeria monocytogenes HCC23]
 gi|290894226|ref|ZP_06557195.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|254799939|sp|B8DE46|RRMF_LISMH RecName: Full=Probable rRNA maturation factor
 gi|217333659|gb|ACK39453.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
 gi|290556223|gb|EFD89768.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307571046|emb|CAR84225.1| metal-dependent hydrolase family protein [Listeria monocytogenes
           L99]
          Length = 161

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 10/128 (7%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCS 97
           Y   E   ELSL FT +  I  +N EYR  D+ T+V+SF             +   D  +
Sbjct: 33  YLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLET 92

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +  VM GL++ 
Sbjct: 93  PRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKE 152

Query: 158 ILEDLGIN 165
           +L+  G+ 
Sbjct: 153 VLDAYGLE 160


>gi|260892062|ref|YP_003238159.1| protein of unknown function UPF0054 [Ammonifex degensii KC4]
 gi|260864203|gb|ACX51309.1| protein of unknown function UPF0054 [Ammonifex degensii KC4]
          Length = 149

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 3/105 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+ +   D   I  LN  YRG D PTNVL+FP      +    L+LGD+V++ E    E
Sbjct: 39  VEVGVTLLDDTGIRELNRRYRGKDAPTNVLAFPMG---EEEPPVLLLGDVVISVETARSE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   GK  E  L HL++HG LHLLGYDH  D +  +M   E ++L
Sbjct: 96  AEEEGKGIEEKLAHLVVHGVLHLLGYDHETDAEEALMREKEEAVL 140


>gi|309379621|emb|CBX21792.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 171

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 72/146 (49%), Gaps = 11/146 (7%)

Query: 37  AKAVSNLISKGYFVKE---------NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           A + +NL SK  F +             ++ L+  D       N +YRG D  TNVLSF 
Sbjct: 24  ASSAANLPSKHDFYRWAWSALKSGYRRADIGLILLDEEAARAYNRDYRGKDYATNVLSFA 83

Query: 88  TAFASSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                   C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D
Sbjct: 84  LNEGEILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIED 143

Query: 146 KDACVMEGLERSILEDLGINDPYEVD 171
            +A +ME  E  ++   G  +PY  D
Sbjct: 144 DEAEIMEAEEIRLMRAAGYPNPYRED 169


>gi|256847124|ref|ZP_05552570.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715788|gb|EEU30763.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 157

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 22/150 (14%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           H + L E + A A   L      +KEN  E+SL F  +  I+ LN +YRG+D+ T+V+SF
Sbjct: 16  HQKQLAEKLLAFAAHQL-----GLKEND-EMSLTFVRNPEIKALNAKYRGVDRATDVISF 69

Query: 87  PTAFASSDGCSSLM------------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
               A  DG   ++            LGD+ ++ + ++ +A  LG   +  L  L++HGF
Sbjct: 70  ----AMGDGDEEIVMDDAMAAELPHDLGDLFISVDKVKEQALFLGHSADRELGFLVVHGF 125

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           LHL GYDH    D   M  L+  IL+D G+
Sbjct: 126 LHLNGYDHEQPDDEKKMFSLQEKILDDYGL 155


>gi|32491196|ref|NP_871450.1| hypothetical protein WGLp447 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173416|sp|Q8D2A7|RRMF_WIGBR RecName: Full=Probable rRNA maturation factor
 gi|25166403|dbj|BAC24593.1| ybeY [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 152

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           PTN+L+FP    ++D  S   LGD+V+  EI+E EA    K  E+H  H+IIHG LHLLG
Sbjct: 64  PTNILAFPCIMPNNDQIS--FLGDLVVCSEIVEKEAKNQNKSVESHWAHIIIHGTLHLLG 121

Query: 140 YDHVDDKDAC-VMEGLERSILEDLGINDPY 168
           YDH ++ +    ME LE   L   G ++PY
Sbjct: 122 YDHSNNSNKIEEMEILEIKFLNLFGYHNPY 151


>gi|312875653|ref|ZP_07735654.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2053A-b]
 gi|311088907|gb|EFQ47350.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2053A-b]
          Length = 175

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-- 100
           L +K    K N  E+S+ F + ++I  +N  YRG D+PT+V+SF    A  DG  + +  
Sbjct: 31  LSAKKNIKKTNRQEMSINFVNINKIHEINKNYRGKDRPTDVISF----AIEDGTDNDLFA 86

Query: 101 -----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                      +GD+ +  E++E  A      F     + ++HG+LHL GYDH+ D +A 
Sbjct: 87  QFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFGYTLVHGYLHLNGYDHIKDDEAE 146

Query: 150 VMEGLERSILEDLGI 164
           VM G++  +LE+ G+
Sbjct: 147 VMFGIQSKVLEEYGL 161


>gi|314936309|ref|ZP_07843656.1| putative metalloprotease [Staphylococcus hominis subsp. hominis
           C80]
 gi|313654928|gb|EFS18673.1| putative metalloprotease [Staphylococcus hominis subsp. hominis
           C80]
          Length = 153

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 51  KENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDI 104
           KENI    ELS+ F D   I+ +N  YR  DK T+V+SF       D        +LGDI
Sbjct: 31  KENIHEDAELSVTFVDKDEIQEINKNYRDKDKVTDVISFALEEDEPDIIGLDIPRVLGDI 90

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++  ++ + +A      FE  L  L +HGFLHLLGYDH++++D   M G ++ IL   G+
Sbjct: 91  IICTDVAKEQAESYNHSFERELGFLALHGFLHLLGYDHMNEEDEKEMFGRQKEILNAYGL 150


>gi|257090602|ref|ZP_05584963.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|312905134|ref|ZP_07764255.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0635]
 gi|256999414|gb|EEU85934.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|310631524|gb|EFQ14807.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0635]
 gi|315146687|gb|EFT90703.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX4244]
 gi|315579038|gb|EFU91229.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0630]
 gi|323481401|gb|ADX80840.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 159

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 13/141 (9%)

Query: 38  KAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------- 86
           K + NL+  + G+       E+S+ FTD+  I+ +N +YRG D PT+V+SF         
Sbjct: 18  KEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQVINRDYRGKDMPTDVISFALEDEGENE 77

Query: 87  -PTAFASSDGCS-SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
            P  F   +       LGD++++ E    +A   G   E  +  L +HGFLHL GYDH++
Sbjct: 78  LPIIFDDEELAELPRNLGDLIISTERAAEQAVEYGHTLEREMGFLAVHGFLHLNGYDHME 137

Query: 145 DKDACVMEGLERSILEDLGIN 165
            +D   M GL++ IL+  G+ 
Sbjct: 138 PEDEKEMFGLQKEILDAYGLK 158


>gi|34499607|ref|NP_903822.1| hypothetical protein CV_4152 [Chromobacterium violaceum ATCC 12472]
 gi|46577368|sp|Q7NQI5|RRMF_CHRVO RecName: Full=Probable rRNA maturation factor
 gi|34105458|gb|AAQ61813.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 168

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 3/115 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEI 113
            ++S+V  D+     LN +YRG D  TNVLSF  A    +    L L GD+VL   ++E 
Sbjct: 51  AQISIVIVDAAEGRQLNNDYRGKDYATNVLSF--ALNEGEPVEGLPLFGDLVLCAPVVEQ 108

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           EA    K    H  HL++HG LHL G+DH +D +A  ME LE  I++ LG  DPY
Sbjct: 109 EAAEQNKALMAHYAHLLVHGMLHLQGFDHEEDAEAEAMEVLETVIVKQLGYPDPY 163


>gi|323141990|ref|ZP_08076841.1| translation metalloprotein YbeY [Phascolarctobacterium sp. YIT
           12067]
 gi|322413522|gb|EFY04390.1| translation metalloprotein YbeY [Phascolarctobacterium sp. YIT
           12067]
          Length = 168

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--------GCSSLMLGDIVLA 107
           E+ +   D   I  LN EYRG+DKPT+VLSF       D        G    + GDI+++
Sbjct: 40  EVDVTIVDDEEIHALNREYRGMDKPTDVLSFALDEDCEDEDEPELIGGPEEHLFGDIIIS 99

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
            E    +A   G   E  + +L +HG  HLLGYDH+ ++D   M   E   L  + +++ 
Sbjct: 100 AETALRQAEEYGHGLEREMTYLAVHGMFHLLGYDHMTEEDKAEMRAKEEEALRAINLSEE 159

Query: 168 Y 168
           Y
Sbjct: 160 Y 160


>gi|313668982|ref|YP_004049266.1| hypothetical protein NLA_17020 [Neisseria lactamica ST-640]
 gi|313006444|emb|CBN87907.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 209

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 72/146 (49%), Gaps = 11/146 (7%)

Query: 37  AKAVSNLISKGYFVK---------ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           A + +NL SK  F +             ++ L+  D       N +YRG D  TNVLSF 
Sbjct: 62  ASSAANLPSKHDFYRWAWSALKSGYRRADIGLILLDEEAARAYNRDYRGKDYATNVLSFA 121

Query: 88  TAFASSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                   C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D
Sbjct: 122 LNEGEILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIED 181

Query: 146 KDACVMEGLERSILEDLGINDPYEVD 171
            +A +ME  E  ++   G  +PY  D
Sbjct: 182 DEAEIMEAEEIRLMRAAGYPNPYRED 207


>gi|228476121|ref|ZP_04060829.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|228269944|gb|EEK11424.1| conserved hypothetical protein [Staphylococcus hominis SK119]
          Length = 153

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 51  KENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDI 104
           KENI    ELS+ F D   I+ +N  YR  DK T+V+SF       D        +LGDI
Sbjct: 31  KENIHEDAELSVTFVDKDEIQEINKNYRDKDKVTDVISFALEEDEPDIIGLDIPRVLGDI 90

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++  ++ + +A      FE  L  L +HGFLHLLGYDH++++D   M G ++ IL   G+
Sbjct: 91  IICTDVAKEQAESYNHSFERELGFLALHGFLHLLGYDHMNEEDEKEMFGRQKEILNAYGL 150


>gi|294789474|ref|ZP_06754710.1| putative metalloprotease [Simonsiella muelleri ATCC 29453]
 gi|294482554|gb|EFG30245.1| putative metalloprotease [Simonsiella muelleri ATCC 29453]
          Length = 174

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAY 108
            E+SLV  D       N +YRG D  TNVLSF    A ++G         ++ GD+++  
Sbjct: 58  AEISLVLLDEAAARQYNHDYRGKDYATNVLSF----AHNEGEFLFVEQDDVLRGDLIICP 113

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            ++  EA   GK   +H  HL+IHG LHL+G+DH++D +A  ME LE  +L  L I +PY
Sbjct: 114 RVVAKEATEQGKALHDHYAHLVIHGTLHLIGFDHMEDDEAEEMENLETELLAQLNIVNPY 173

Query: 169 E 169
           E
Sbjct: 174 E 174


>gi|116514236|ref|YP_813142.1| metal-dependent hydrolase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123896|ref|YP_004034155.1| metalloprotease [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|122275032|sp|Q04A18|RRMF_LACDB RecName: Full=Probable rRNA maturation factor
 gi|116093551|gb|ABJ58704.1| Predicted metal-dependent hydrolase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|312280459|gb|ADQ61178.1| Putative metalloprotease [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 174

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---------AFASS 93
           L++K    K+N  E+S+ F D  R + +N +YR  D+PT+V+SF           A  + 
Sbjct: 31  LMAKKEIGKDNAQEMSINFVDEDRSQAINRDYRDKDRPTDVISFAIEDGDDGLDLAMFTQ 90

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           D   +  +GD+ +   +IE  +   G  F+    + I+HG+LHL  YDH++  +A  M G
Sbjct: 91  DPDFTEDIGDLFMCPSVIERHSKEYGTGFDREFGYTIVHGYLHLNCYDHIEPDEAKEMFG 150

Query: 154 LERSILEDLGI 164
           ++  +LE+ G+
Sbjct: 151 IQGKVLEEYGL 161


>gi|16803505|ref|NP_464990.1| putative metalloprotease [Listeria monocytogenes EGD-e]
 gi|47095416|ref|ZP_00233026.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           str. 1/2a F6854]
 gi|224500515|ref|ZP_03668864.1| putative metalloprotease [Listeria monocytogenes Finland 1988]
 gi|224501595|ref|ZP_03669902.1| putative metalloprotease [Listeria monocytogenes FSL R2-561]
 gi|254827753|ref|ZP_05232440.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254829776|ref|ZP_05234431.1| putative metalloprotease [Listeria monocytogenes 10403S]
 gi|254898369|ref|ZP_05258293.1| putative metalloprotease [Listeria monocytogenes J0161]
 gi|254912139|ref|ZP_05262151.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936467|ref|ZP_05268164.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284801852|ref|YP_003413717.1| putative metalloprotease [Listeria monocytogenes 08-5578]
 gi|284994994|ref|YP_003416762.1| putative metalloprotease [Listeria monocytogenes 08-5923]
 gi|26006921|sp|Q8Y747|RRMF_LISMO RecName: Full=Probable rRNA maturation factor
 gi|16410894|emb|CAC99543.1| lmo1465 [Listeria monocytogenes EGD-e]
 gi|47016237|gb|EAL07160.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258600132|gb|EEW13457.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258609059|gb|EEW21667.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284057414|gb|ADB68355.1| putative metalloprotease [Listeria monocytogenes 08-5578]
 gi|284060461|gb|ADB71400.1| putative metalloprotease [Listeria monocytogenes 08-5923]
 gi|293590110|gb|EFF98444.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 161

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 10/127 (7%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCS 97
           Y   E   ELSL FT +  I  +N EYR  D+ T+V+SF             +   D  +
Sbjct: 33  YLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLET 92

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +  VM GL++ 
Sbjct: 93  PRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKE 152

Query: 158 ILEDLGI 164
           +L+  G+
Sbjct: 153 VLDAYGL 159


>gi|325686033|gb|EGD28091.1| metalloprotease [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 174

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---------AFASS 93
           L++K    K+N  E+S+ F D  R + +N +YR  D+PT+V+SF           A  + 
Sbjct: 31  LMAKKEIGKDNAQEMSINFVDEDRSQAINRDYRDKDRPTDVISFAIEDGDDGLDLAMFTQ 90

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           D   +  +GD+ +   +IE  +   G  F+    + I+HG+LHL  YDH++  +A  M G
Sbjct: 91  DPDFTEDIGDLFMCPSVIERHSKEYGTGFDREFGYTIVHGYLHLNCYDHIEPDEAKEMFG 150

Query: 154 LERSILEDLGI 164
           ++  +LE+ G+
Sbjct: 151 IQGKVLEEYGL 161


>gi|153853176|ref|ZP_01994585.1| hypothetical protein DORLON_00570 [Dorea longicatena DSM 13814]
 gi|149753962|gb|EDM63893.1| hypothetical protein DORLON_00570 [Dorea longicatena DSM 13814]
          Length = 164

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 18/157 (11%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           GD + L   CE +  + V   +   Y       E++L+ T++ +I  +N E+RGID+ T+
Sbjct: 9   GD-VKLPLECEALAKRVVEEALD--YVGCPYEAEVNLLLTENAQIHEMNKEFRGIDRATD 65

Query: 83  VLSFPTAFASSDGC---------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           VLSFP       G                  L LGDIV++ E +  +A   G        
Sbjct: 66  VLSFPMIDYPEPGTFDFLEEQEDCFDPESGELTLGDIVISKEKVLAQAEEYGHSPMREYA 125

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LI H  LHL GYDH++D++  VME  +R I+E L I
Sbjct: 126 FLIAHSVLHLTGYDHMEDEERQVMEQKQREIMERLDI 162


>gi|89899547|ref|YP_522018.1| hypothetical protein Rfer_0737 [Rhodoferax ferrireducens T118]
 gi|122479948|sp|Q220R6|RRMF_RHOFD RecName: Full=Probable rRNA maturation factor
 gi|89344284|gb|ABD68487.1| protein of unknown function UPF0054 [Rhodoferax ferrireducens T118]
          Length = 148

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 6/114 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+   + LN +YR  D  TNVL+F            ++  D+VL   ++  E
Sbjct: 41  AEITVRIVDTEEGQALNRDYRHKDYATNVLTFDYT------QEPVVTADLVLCAPVVAQE 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   GK  + H  HL++HG LH  G+DH  ++DA VME  E  I+  LG  +PY
Sbjct: 95  AKEQGKTLQEHYAHLLVHGALHAQGWDHEAEEDAQVMELRESEIMARLGFENPY 148


>gi|325681532|ref|ZP_08161057.1| translation metalloprotein YbeY [Ruminococcus albus 8]
 gi|324106799|gb|EGC01090.1| translation metalloprotein YbeY [Ruminococcus albus 8]
          Length = 170

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 11/121 (9%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-------CSSLMLGDIV 105
           N  E+S+ F +  +I  LN E+R ID+ T+VLSFP      DG         + +LGDIV
Sbjct: 40  NDAEVSVSFVNDSQIHELNKEHRNIDRSTDVLSFPLG---EDGVYDINYETGASLLGDIV 96

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGI 164
           ++ E    +A V G   E  +  L +H  LHLLGYDH +      +M   E +ILE LGI
Sbjct: 97  ISLETATKQAQVYGHSLEREVGFLTVHSMLHLLGYDHEESSLQERIMREKEEAILEQLGI 156

Query: 165 N 165
           +
Sbjct: 157 S 157


>gi|239827762|ref|YP_002950386.1| metalloprotease [Geobacillus sp. WCH70]
 gi|259646848|sp|C5D4S8|RRMF_GEOSW RecName: Full=Probable rRNA maturation factor
 gi|239808055|gb|ACS25120.1| protein of unknown function UPF0054 [Geobacillus sp. WCH70]
          Length = 156

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAY 108
            E+ + F D+ RI  +N +YRG D+PT+V+SF             D     +LGDI+++ 
Sbjct: 39  AEVGISFVDNERIRIINRDYRGKDQPTDVISFALEEKGEGEVEIVDADIPPLLGDIIISI 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              + +A   G  F   L  L +HGFLHLLGYDH  +++  +M   ++ ILE  G+ 
Sbjct: 99  PKAKEQAKEYGHSFMRELGFLAVHGFLHLLGYDHKTEEEEKIMFSKQKDILERYGLT 155


>gi|240122830|ref|ZP_04735786.1| hypothetical protein NgonP_02615 [Neisseria gonorrhoeae PID332]
 gi|268681445|ref|ZP_06148307.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268621729|gb|EEZ54129.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
          Length = 171

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +  GY       ++ L+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKSGYLR----ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH+ D +A 
Sbjct: 88  EILPCQVSERLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY  D
Sbjct: 148 IMEAEEIRLMRAAGYPNPYRED 169


>gi|289550659|ref|YP_003471563.1| predicted metal-dependent hydrolase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658154|ref|ZP_07911026.1| putative metal-dependent hydrolase [Staphylococcus lugdunensis
           M23590]
 gi|289180191|gb|ADC87436.1| predicted metal-dependent hydrolase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496483|gb|EFU84806.1| putative metal-dependent hydrolase [Staphylococcus lugdunensis
           M23590]
          Length = 153

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 3/114 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEII 111
            ELS+ F D   I+ +N  YR  DK T+V+SF       +        +LGDI++  ++ 
Sbjct: 38  AELSVTFVDKEEIQQINKIYRDKDKVTDVISFALEEDEPEITGLEIPRVLGDIIICTDVA 97

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + +A   G  FE  L  L +HGFLHLLGYDH++++D   M G + +IL   G+ 
Sbjct: 98  QEQATTYGHSFERELGFLALHGFLHLLGYDHMNEEDEKKMFGRQETILTAYGLT 151


>gi|291542198|emb|CBL15308.1| conserved hypothetical protein TIGR00043 [Ruminococcus bromii
           L2-63]
          Length = 171

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 4/117 (3%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----FASSDGCSSLMLGDIVLA 107
           E   E+S+ FTD+  I+ LN +YR  D  T+VLSFP      + ++    + +LGD+V++
Sbjct: 42  EGSAEISVTFTDNEGIKALNKQYRDKDIETDVLSFPMGENGVYDTNPETGAQILGDVVIS 101

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            E    +A + G   +  + +L  H  LHLLGYDH++  +   M   E  ++E LG+
Sbjct: 102 MEKARDQAELFGHSLQREVGYLTAHSVLHLLGYDHMEKLERVRMREKEELVMEQLGL 158


>gi|312869122|ref|ZP_07729296.1| translation metalloprotein YbeY [Lactobacillus oris PB013-T2-3]
 gi|311095368|gb|EFQ53638.1| translation metalloprotein YbeY [Lactobacillus oris PB013-T2-3]
          Length = 159

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 13/145 (8%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            ++   + V    ++   +K++  E+S+    +  I  LN +YRG+D+ T+VLSF  A  
Sbjct: 16  AQLALVRDVLQFAARQLSLKDS-TEMSVTMMTNPAIRKLNQQYRGVDRATDVLSF-AAEE 73

Query: 92  SSDGCSSLM-----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           S D    +M           LGD+ ++ + +E +A  LG   +  L  L++HGFLHL GY
Sbjct: 74  SGDETPIIMDPELAAELPENLGDLFVSIDKVEEQAKFLGHSVDRELGFLVVHGFLHLNGY 133

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH    D   M  L+R IL++ G+ 
Sbjct: 134 DHEKQADEQRMFDLQREILDEYGLQ 158


>gi|313888895|ref|ZP_07822555.1| translation metalloprotein YbeY [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845068|gb|EFR32469.1| translation metalloprotein YbeY [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 148

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 6/112 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCSSLMLGDIVLAYEIIE 112
           VE+S+ F     I+ LN +YRG+D+ T+VLSFP    F         +LGD+++    + 
Sbjct: 39  VEVSVSFVGDEEIKNLNRDYRGVDRSTDVLSFPMDDEFI----IDKRILGDVIINTRRVM 94

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +A  LG   E  L +L +H  LHLLGYDH++D+D   M   E+  +++L I
Sbjct: 95  EQAEELGHSHERELSYLTVHSILHLLGYDHMEDEDKREMREREKLSMKELEI 146


>gi|241759364|ref|ZP_04757470.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|241320500|gb|EER56797.1| conserved hypothetical protein [Neisseria flavescens SK114]
          Length = 171

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 23/152 (15%)

Query: 37  AKAVSNLISKGYFVKENIVEL---------SLVFTDSHRIETLNFEYRGIDKPTNVLSF- 86
           A + +NL S+  F +     L         SL+  D       N +YRG D  TNVLSF 
Sbjct: 24  ASSAANLPSERDFYRWTWSALKNEYRRAGISLILLDEEEARDYNRDYRGKDYATNVLSFA 83

Query: 87  -------PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
                  P  F  SDG    + GD+V+  +++  EA   GK  E H  HL IHG LHL+G
Sbjct: 84  LNEGEILPDQF--SDG----LYGDLVICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMG 137

Query: 140 YDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           YDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 138 YDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 169


>gi|227510286|ref|ZP_03940335.1| metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189938|gb|EEI70005.1| metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 161

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 12/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML------------G 102
            E+S+   ++  I  +N EYRG+D+ T+V+SF     + D    +++            G
Sbjct: 38  TEMSVTLVNNDEIHKINREYRGVDRATDVISFAIEDEAEDDDFPIVMDEDMQESIPENIG 97

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI ++ + +  +A+ LG  F+  L  L++HGFLHL GYDH++  DA +M  L++ IL   
Sbjct: 98  DIFVSVDKVAEQADYLGHSFQRELGFLVVHGFLHLNGYDHMEKADADIMFPLQKEILNAY 157

Query: 163 GI 164
           G+
Sbjct: 158 GL 159


>gi|260101322|ref|ZP_05751559.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260084907|gb|EEW69027.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
          Length = 174

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N +E+S+ F D  R   +N +YR  D+PT+V+SF    A  DG  ++ L 
Sbjct: 31  LLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRDKDRPTDVISF----AIQDGEDAIDLS 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I+  +   G  F+    + ++HGFLHL GYDH+   +A 
Sbjct: 87  AFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFGYTVVHGFLHLNGYDHIKPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LE+ G+
Sbjct: 147 EMFGIQGKVLEECGL 161


>gi|317056498|ref|YP_004104965.1| hypothetical protein Rumal_1833 [Ruminococcus albus 7]
 gi|315448767|gb|ADU22331.1| protein of unknown function UPF0054 [Ruminococcus albus 7]
          Length = 170

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 5/116 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----FASSDGCSSLMLGDIVLAYEI 110
            E+S+ F +  +I  LN E+R ID+PT+VLSFP      +  +    + +LGDIV++ E 
Sbjct: 42  AEVSVSFVNDKQIHELNKEHRDIDRPTDVLSFPLGENGEYDVNYESGACLLGDIVISLET 101

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGIN 165
              +A V G   E  +  L +H  LHLLGYDH +      +M   E +IL  LGI+
Sbjct: 102 ATRQAQVYGHSLEREVGFLTVHSMLHLLGYDHEESSLQERIMREKEEAILAQLGIS 157


>gi|242373875|ref|ZP_04819449.1| metal-dependent hydrolase [Staphylococcus epidermidis M23864:W1]
 gi|242348429|gb|EES40031.1| metal-dependent hydrolase [Staphylococcus epidermidis M23864:W1]
          Length = 155

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 13/136 (9%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           + FAK   N+        E+  ELS+ F D   I+ +N  YR  DK T+V+SF       
Sbjct: 25  LTFAKKQENI--------ESDAELSVTFVDKDEIQNINKVYRDKDKVTDVISFALEEDEP 76

Query: 94  D-GCSSL----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           D   + L    +LGDI++  ++ + +A   G  FE  L  L +HGFLHLLGYDH+ + D 
Sbjct: 77  DIDMNDLEIPRVLGDIIICTDVAQEQAESYGHSFERELGFLALHGFLHLLGYDHMTEDDE 136

Query: 149 CVMEGLERSILEDLGI 164
             M G + +IL   G+
Sbjct: 137 KEMFGRQDAILNSYGL 152


>gi|225027038|ref|ZP_03716230.1| hypothetical protein EUBHAL_01294 [Eubacterium hallii DSM 3353]
 gi|224955502|gb|EEG36711.1| hypothetical protein EUBHAL_01294 [Eubacterium hallii DSM 3353]
          Length = 169

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 16/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            ++ ++ TD+  I  +N E+R ID+PT+VLSFP A     G                   
Sbjct: 38  AQVYVLLTDNEEIHEINKEHRQIDRPTDVLSFPMADYPVPGDFSDIEERDPDAFHPETGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDI+++ + ++ +A   G      L  L+ H  LHL+GYDH+ D++  VME  +  I
Sbjct: 98  LILGDIIISMDKVKEQAKAYGHSNTRELAFLVAHSMLHLMGYDHMVDEERKVMEAKQEEI 157

Query: 159 LEDLG 163
           L++ G
Sbjct: 158 LKNCG 162


>gi|300361844|ref|ZP_07058021.1| metal-dependent hydrolase [Lactobacillus gasseri JV-V03]
 gi|300354463|gb|EFJ70334.1| metal-dependent hydrolase [Lactobacillus gasseri JV-V03]
          Length = 175

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 11/154 (7%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + DE++     +  +   ++NL+  +K    KEN  E+S+ F  S +I  +N +YRG D+
Sbjct: 8   FNDEVNFLNNDDKDWIPWITNLLLSAKKEINKENAQEMSINFVSSEKIHEINKKYRGKDR 67

Query: 80  PTNVLSFPTAFASSDGCSSLM---------LGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           PT+V+SF       +   S           +GD+ L  E+I+  +      F     + +
Sbjct: 68  PTDVISFAIEDGLDEDFMSAFNDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFGYTL 127

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +HG+LHL G+DH++D +A VM G++  +L + G+
Sbjct: 128 VHGYLHLNGFDHIEDDEAKVMFGIQGKVLREYGL 161


>gi|239817628|ref|YP_002946538.1| hypothetical protein Vapar_4667 [Variovorax paradoxus S110]
 gi|239804205|gb|ACS21272.1| protein of unknown function UPF0054 [Variovorax paradoxus S110]
          Length = 152

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+   + LN E+RG D  TNVL+F          S +++ D+VL   ++  E
Sbjct: 42  AEITVRIVDAEEGQRLNREFRGKDYATNVLTFDYT------QSPMVMADLVLCAPVVASE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K    H  HL++HG LH  G+DH   + DA  ME  E  IL  LGI +PY
Sbjct: 96  AKEQRKTLAAHYAHLLVHGTLHAQGWDHETGEADAEAMEAREIEILAGLGIRNPY 150


>gi|297588409|ref|ZP_06947052.1| probable metal-dependent hydrolase [Finegoldia magna ATCC 53516]
 gi|297573782|gb|EFH92503.1| probable metal-dependent hydrolase [Finegoldia magna ATCC 53516]
          Length = 153

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+SL F     I+ LN +YR  D  T+VLSFP          + +LGDI++  +    +A
Sbjct: 40  EVSLSFVSEEEIKELNRDYRNKDSVTDVLSFP--LEDDFQIQTNLLGDIIICCKRAVEQA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
                  +  +V+L++H   HLLGYDH+D+ D  +M   E+S L+++GI
Sbjct: 98  KEYNHSIKREIVYLVVHSMFHLLGYDHIDESDKIIMRNKEKSALKEIGI 146


>gi|268679311|ref|YP_003303742.1| hypothetical protein Sdel_0671 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617342|gb|ACZ11707.1| protein of unknown function UPF0054 [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 140

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 7/109 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ LVF +S  +  LN E+RG+DK T+VLSFP      D      LG IV+ YE  + +A
Sbjct: 28  EVELVFINSADMHALNLEHRGVDKTTDVLSFPI-----DDFPHAPLGSIVINYEYAKEKA 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             LG   E+ +  L IHG LHLLGYDH  + D   M   E++++E   +
Sbjct: 83  LALGHSHEDEITLLFIHGMLHLLGYDH--EVDQGEMREKEKALIEQYAL 129


>gi|296532214|ref|ZP_06894964.1| possible metal-dependent hydrolase [Roseomonas cervicalis ATCC
           49957]
 gi|296267458|gb|EFH13333.1| possible metal-dependent hydrolase [Roseomonas cervicalis ATCC
           49957]
          Length = 159

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 7/113 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++++ TD   ++ LN E+R   KPTNVLSFP       G     LGDI LA  ++  EA 
Sbjct: 51  MTVLLTDDRSVKRLNGEHRNKVKPTNVLSFP-------GEGFGHLGDIALALGVVRREAR 103

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              +    HL HL+ HG LHL G+DH+   +A  ME  E  I+  L + +P+ 
Sbjct: 104 AAKRRVAAHLAHLVAHGTLHLGGHDHIQAGEARRMERAEARIMRRLALPNPWR 156


>gi|291519462|emb|CBK74683.1| conserved hypothetical protein TIGR00043 [Butyrivibrio fibrisolvens
           16/4]
          Length = 165

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---------------CSSL 99
            E+S+  TD+  I+ +N E+R ID PT+VLSFP     + G                  +
Sbjct: 38  AEISITITDNDGIQAINKEFRNIDAPTDVLSFPMIDYPAPGKFDHIENDDDLFNPETGEV 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDIVL+   I  +A   G         LI H  LHL G+DH+ + DA VME  +R IL
Sbjct: 98  ILGDIVLSVPRILSQAEEYGHSVLREYAFLIAHSMLHLFGFDHMTESDASVMEQKQREIL 157

Query: 160 EDLGIN 165
           + L I+
Sbjct: 158 DILNIS 163


>gi|168335125|ref|ZP_02693233.1| hypothetical protein Epulo_08803 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 153

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 3/116 (2%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAYE 109
           N +E+SL   D   I T+N ++R ID+ T+VLSFP   A S   D    ++LGDI++  +
Sbjct: 37  NDIEISLSIVDKETIRTINRDFREIDRDTDVLSFPQFEAQSEFVDSADVVILGDIIICLD 96

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           I + +A          +  LI H   HLLGYDH+ + D  +M   +  +LE L I 
Sbjct: 97  IAKEQAVAYNHSLAREICFLIAHSCFHLLGYDHMTEDDEIIMFAKQDCVLETLKIT 152


>gi|329733127|gb|EGG69464.1| translation metalloprotein YbeY [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 155

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDGCSSLMLGDI 104
           ++  ELS+ F D   I+ +N  YR  DK T+V+SF          F+  D     +LGDI
Sbjct: 35  QDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLD--IPRVLGDI 92

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL   G+
Sbjct: 93  IICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGL 152

Query: 165 N 165
            
Sbjct: 153 T 153


>gi|104774146|ref|YP_619126.1| hypothetical protein Ldb1253 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|122397141|sp|Q1G9W4|RRMF_LACDA RecName: Full=Probable rRNA maturation factor
 gi|103423227|emb|CAI98055.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325125926|gb|ADY85256.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 174

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N  E+S+ F D  R + +N +YR  D+PT+V+SF    A  DG   L L 
Sbjct: 31  LMAKKEIGKDNAQEMSINFVDEDRSQAINRDYRDKDRPTDVISF----AIEDGDDGLDLS 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +IE  +   G  F+    + I+HG+LHL  YDH++  +A 
Sbjct: 87  MFTQDPDFTEDIGDLFMCPSVIERHSKEYGTGFDREFGYTIVHGYLHLNCYDHIEPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LE+ G+
Sbjct: 147 EMFGIQGKVLEEYGL 161


>gi|253681848|ref|ZP_04862645.1| conserved hypothetical protein YbeY [Clostridium botulinum D str.
           1873]
 gi|253561560|gb|EES91012.1| conserved hypothetical protein YbeY [Clostridium botulinum D str.
           1873]
          Length = 166

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 72/145 (49%), Gaps = 18/145 (12%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------- 88
            K + N   K   VK N  E+S++F D++ I+ +N E R IDK T+VLSFP         
Sbjct: 21  VKEIINYTLKEEEVKVN-TEVSVIFIDNNTIKEINKETRDIDKVTDVLSFPMLDYPQGKV 79

Query: 89  --------AF-ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
                    F AS      L+LGDIVL+ E  E ++      F   + +L +H  LHLLG
Sbjct: 80  YKDTYKDYEFDASYLDEGELVLGDIVLSLEKAEEQSTEFRHSFLREVCYLTVHSVLHLLG 139

Query: 140 YDHVDDKDACVMEGLERSILEDLGI 164
           YDH++D D   M   E  ILE   I
Sbjct: 140 YDHMEDDDKVRMRKREEEILERFSI 164


>gi|270308535|ref|YP_003330593.1| hypothetical protein DhcVS_1151 [Dehalococcoides sp. VS]
 gi|270154427|gb|ACZ62265.1| hypothetical protein DhcVS_1151 [Dehalococcoides sp. VS]
          Length = 160

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 12/137 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF- 86
            + L    F K +++   K      N  EL +V T    I+ LNF+YR +D+PT+VLSF 
Sbjct: 11  FKKLVSSQFLKKIASETLKAQAADPN-SELGIVITGQEEIKDLNFKYRELDEPTDVLSFY 69

Query: 87  -----PTAFASSDGCSS-----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
                P    + D   +     + LG+++++Y   EI+A+  G      +  L+IHG LH
Sbjct: 70  MLEENPENLTAPDDFPTPPDENIHLGEVIISYPQAEIQASAAGHSVNYEIAFLLIHGVLH 129

Query: 137 LLGYDHVDDKDACVMEG 153
           LLGYDH +     VM+ 
Sbjct: 130 LLGYDHHEPVSEAVMKS 146


>gi|257869125|ref|ZP_05648778.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257803289|gb|EEV32111.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----------PTAFASSDGCSSLMLGDI 104
            E+S+ F D+  I+ +N +YR  D+PT+V+SF          P  F          LGDI
Sbjct: 37  TEMSVTFMDNAAIQVINRDYRDKDQPTDVISFALEEETEEELPIIFDDEMPAMPRNLGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E  + +A+  G  ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+
Sbjct: 97  MISVERAKEQASEYGHSYDRELGFLALHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGL 156

Query: 165 N 165
            
Sbjct: 157 K 157


>gi|227524437|ref|ZP_03954486.1| metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290]
 gi|227088396|gb|EEI23708.1| metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290]
          Length = 161

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 12/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML------------G 102
            E+S+   +++ I  +N EYRG+D+ T+V+SF     + D    +++            G
Sbjct: 38  TEMSVTLVNNNEIHKINREYRGVDRATDVISFAIEDEAEDDDFPIVMDEDMQESIPENIG 97

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI ++ + +  +A+ LG  F+  L  L++HGFLHL GYDH++  DA +M  L+  IL   
Sbjct: 98  DIFVSVDKVAEQADYLGHSFQRELGFLVVHGFLHLNGYDHMEKADADIMFPLQEEILNAY 157

Query: 163 GI 164
           G+
Sbjct: 158 GL 159


>gi|323466382|gb|ADX70069.1| Hypothetical cytosolic protein [Lactobacillus helveticus H10]
          Length = 174

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N +E+S+ F D  R   +N +YR  D+PT+V+SF    A  DG  ++ L 
Sbjct: 31  LLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRDKDRPTDVISF----AIEDGEDAIDLS 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I+  +   G  F+    + ++HGFLHL GYDH+   +A 
Sbjct: 87  AFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFGYTVVHGFLHLNGYDHIKPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LE+ G+
Sbjct: 147 EMFGIQGKVLEECGL 161


>gi|156744199|ref|YP_001434328.1| hypothetical protein Rcas_4283 [Roseiflexus castenholzii DSM 13941]
 gi|189040181|sp|A7NRW4|RRMF_ROSCS RecName: Full=Probable rRNA maturation factor
 gi|156235527|gb|ABU60310.1| protein of unknown function UPF0054 [Roseiflexus castenholzii DSM
           13941]
          Length = 159

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 18/122 (14%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-------SLMLGDIVLA 107
           VE+S++ TD   +  LN  YRG+D PT+VLSF    A  D  S          LGDI ++
Sbjct: 42  VEISILITDDADVHRLNQTYRGVDAPTDVLSF----AEDDDHSFVRPPDAPRYLGDIAIS 97

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH----VDDKDACVMEGLERSILEDLG 163
           ++ +  +A   G   E  L  L++HG LHLLGYDH    VD+ D   M   E +IL  LG
Sbjct: 98  WDRVVAQAAEYGHSRERELAFLVVHGVLHLLGYDHERGPVDEAD---MRAREEAILGALG 154

Query: 164 IN 165
           ++
Sbjct: 155 LS 156


>gi|46907693|ref|YP_014082.1| metalloprotease [Listeria monocytogenes serotype 4b str. F2365]
 gi|47093470|ref|ZP_00231233.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           str. 4b H7858]
 gi|226224066|ref|YP_002758173.1| hypothetical protein Lm4b_01475 [Listeria monocytogenes Clip81459]
 gi|254824476|ref|ZP_05229477.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254852090|ref|ZP_05241438.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932650|ref|ZP_05266009.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300765608|ref|ZP_07075587.1| hypothetical protein LMHG_12515 [Listeria monocytogenes FSL N1-017]
 gi|59799121|sp|Q71ZK5|RRMF_LISMF RecName: Full=Probable rRNA maturation factor
 gi|259646403|sp|C1KVB2|RRMF_LISMC RecName: Full=Probable rRNA maturation factor
 gi|46880962|gb|AAT04259.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47018146|gb|EAL08916.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           str. 4b H7858]
 gi|225876528|emb|CAS05237.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605389|gb|EEW17997.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293584209|gb|EFF96241.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593714|gb|EFG01475.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513709|gb|EFK40777.1| hypothetical protein LMHG_12515 [Listeria monocytogenes FSL N1-017]
 gi|328465508|gb|EGF36737.1| metal-binding heat shock protein [Listeria monocytogenes 1816]
 gi|328474977|gb|EGF45771.1| metal-binding heat shock protein [Listeria monocytogenes 220]
 gi|332311906|gb|EGJ25001.1| Putative rRNA maturation factor [Listeria monocytogenes str. Scott
           A]
          Length = 161

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 10/127 (7%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCS 97
           Y   E   ELSL FT +  I  +N EYR  D+ T+V+SF             +   D  +
Sbjct: 33  YLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLET 92

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +  +M GL++ 
Sbjct: 93  PRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKE 152

Query: 158 ILEDLGI 164
           +L+  G+
Sbjct: 153 VLDAYGL 159


>gi|161507652|ref|YP_001577606.1| hypothetical protein lhv_1302 [Lactobacillus helveticus DPC 4571]
 gi|172048292|sp|A8YVM8|RRMF_LACH4 RecName: Full=Probable rRNA maturation factor
 gi|160348641|gb|ABX27315.1| hypothetical protein lhv_1302 [Lactobacillus helveticus DPC 4571]
          Length = 174

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N +E+S+ F D  R   +N +YR  D+PT+V+SF    A  DG  ++ L 
Sbjct: 31  LLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRDKDRPTDVISF----AIEDGEDAIDLS 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I+  +   G  F+    + ++HGFLHL GYDH+   +A 
Sbjct: 87  VFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFGYTVVHGFLHLNGYDHIKPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LE+ G+
Sbjct: 147 EMFGIQGKVLEECGL 161


>gi|255521280|ref|ZP_05388517.1| putative metalloprotease [Listeria monocytogenes FSL J1-175]
          Length = 130

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 10/128 (7%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCS 97
           Y   E   ELSL FT +  I  +N EYR  D+ T+V+SF             +   D  +
Sbjct: 2   YLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLET 61

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +  +M GL++ 
Sbjct: 62  PRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKE 121

Query: 158 ILEDLGIN 165
           +L+  G+ 
Sbjct: 122 VLDAYGLE 129


>gi|56421026|ref|YP_148344.1| putative metalloprotease [Geobacillus kaustophilus HTA426]
 gi|261418491|ref|YP_003252173.1| metalloprotease [Geobacillus sp. Y412MC61]
 gi|297529343|ref|YP_003670618.1| hypothetical protein GC56T3_0999 [Geobacillus sp. C56-T3]
 gi|319767548|ref|YP_004133049.1| hypothetical protein GYMC52_2525 [Geobacillus sp. Y412MC52]
 gi|59799076|sp|Q5KX10|RRMF_GEOKA RecName: Full=Probable rRNA maturation factor
 gi|56380868|dbj|BAD76776.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
 gi|261374948|gb|ACX77691.1| protein of unknown function UPF0054 [Geobacillus sp. Y412MC61]
 gi|297252595|gb|ADI26041.1| protein of unknown function UPF0054 [Geobacillus sp. C56-T3]
 gi|317112414|gb|ADU94906.1| protein of unknown function UPF0054 [Geobacillus sp. Y412MC52]
          Length = 156

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAY 108
            E+S+ F D+ RI  +N +YRG D PT+VLSF       +    +      +LGDIV++ 
Sbjct: 39  AEVSVTFVDNERIRAMNRDYRGKDAPTDVLSFALEEEGEEEVHIVGADMPPVLGDIVISI 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              + +A   G  F   L  L +HGFLHLLGYDH  +++  VM   +  IL   G+ 
Sbjct: 99  PKAKEQAAAYGHSFMRELGFLAVHGFLHLLGYDHGTEEEERVMFAKQEDILARFGLT 155


>gi|254991895|ref|ZP_05274085.1| putative metalloprotease [Listeria monocytogenes FSL J2-064]
          Length = 161

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 10/127 (7%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCS 97
           Y   E   ELSL FT +  I  +N EYR  D+ T+V+SF             +   D  +
Sbjct: 33  YLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLET 92

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +  +M GL++ 
Sbjct: 93  PRMLGDIIISTEKAEEQATDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKE 152

Query: 158 ILEDLGI 164
           +L+  G+
Sbjct: 153 VLDAYGL 159


>gi|187778471|ref|ZP_02994944.1| hypothetical protein CLOSPO_02065 [Clostridium sporogenes ATCC
           15579]
 gi|187772096|gb|EDU35898.1| hypothetical protein CLOSPO_02065 [Clostridium sporogenes ATCC
           15579]
          Length = 166

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 23/150 (15%)

Query: 36  FAKAVSNLISKGYFVKENIV----ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--- 88
           F   +  +I   Y +KE  V    E+S+VF D++ I+ +N +YR IDK T+VLSFP    
Sbjct: 17  FENKIKEIID--YALKEERVNIDYEISVVFIDNNSIKEINKDYRNIDKVTDVLSFPMLDY 74

Query: 89  -------------AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
                         F  SD    +L+LGDI L+ E  E ++      F     +L IH  
Sbjct: 75  EEGKVFKDIYLNYEFDESDLDEGNLVLGDIALSLEKAEEQSKEFEHSFLRETCYLTIHSV 134

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           LHLLGYDH+ + +  +M   E  IL++  +
Sbjct: 135 LHLLGYDHIKEDEKAIMRQREEEILKNFNL 164


>gi|27904874|ref|NP_778000.1| hypothetical protein bbp393 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29428175|sp|P59478|RRMF_BUCBP RecName: Full=Probable rRNA maturation factor
 gi|27904272|gb|AAO27105.1| hypothetical protein YbeY [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 154

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 2/102 (1%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I++LN+++R  +K TN+LSF  ++ +        +GD+++  EI+  EA       E+H 
Sbjct: 53  IKSLNYKFRQKNKATNILSF--SYINDKMIDKNYIGDLIICSEIVTEEAKKKNVTLESHW 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H+ IHG LHLLGY+H +  +   ME LE  I+  L   +PY
Sbjct: 111 AHITIHGILHLLGYNHDNLNNRIKMEYLETKIMASLNYKNPY 152


>gi|59800603|ref|YP_207315.1| hypothetical protein NGO0145 [Neisseria gonorrhoeae FA 1090]
 gi|268596185|ref|ZP_06130352.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|291044524|ref|ZP_06570233.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293397660|ref|ZP_06641866.1| hypothetical protein NGNG_00646 [Neisseria gonorrhoeae F62]
 gi|59717498|gb|AAW88903.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|268549973|gb|EEZ44992.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|291011418|gb|EFE03414.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611606|gb|EFF40675.1| hypothetical protein NGNG_00646 [Neisseria gonorrhoeae F62]
          Length = 211

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++ L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 91  ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDLIICPQVVL 150

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH+ D +A +ME  E  ++   G  +PY  D
Sbjct: 151 KEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAAGYPNPYRED 209


>gi|194097776|ref|YP_002000817.1| Putative metalloprotease NGO0145 [Neisseria gonorrhoeae NCCP11945]
 gi|268594133|ref|ZP_06128300.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|193933066|gb|ACF28890.1| Putative metalloprotease NGO0145 [Neisseria gonorrhoeae NCCP11945]
 gi|268547522|gb|EEZ42940.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|317163557|gb|ADV07098.1| Putative metalloprotease [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 211

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++ L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 91  ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDLIICPQVVL 150

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH+ D +A +ME  E  ++   G  +PY  D
Sbjct: 151 KEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAAGYPNPYRED 209


>gi|154148178|ref|YP_001406320.1| putative metalloprotease [Campylobacter hominis ATCC BAA-381]
 gi|153804187|gb|ABS51194.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
          Length = 138

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 8/134 (5%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           +CE  F + ++++     F+    VEL  VF +S  ++ LN   RGIDK T+VLSFP  F
Sbjct: 3   ICETEFPQILNDI---NKFLGSYNVEL--VFVNSDEMKELNLTERGIDKTTDVLSFP-LF 56

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           +  D      +G +V+  ++ + +AN LG    + +  L +HGFLH+LG+DH  + D   
Sbjct: 57  SKIDNYGDFPIGSVVINLDLAKRKANELGHNVNDEIALLFMHGFLHILGFDH--ETDNGE 114

Query: 151 MEGLERSILEDLGI 164
           M   ER I+E+  +
Sbjct: 115 MREKEREIIENFKL 128


>gi|167946144|ref|ZP_02533218.1| hypothetical protein Epers_06212 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 100

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 69  TLNFEYRGIDKPTNVLSFP--TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           T   +YRG D+PTNVLSFP  T        +  +LGD+V+   ++  EA   GK   +H 
Sbjct: 13  TEXRDYRGKDRPTNVLSFPFETPPELPAEAAGNLLGDLVICAPVVAREAAAQGKSPISHW 72

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEG 153
           +H+++HG LHL G DH +D +A +M G
Sbjct: 73  IHMVVHGVLHLQGLDHQNDAEAGIMRG 99


>gi|289434747|ref|YP_003464619.1| hypothetical protein lse_1382 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170991|emb|CBH27533.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|313633222|gb|EFS00094.1| putative metalloprotease [Listeria seeligeri FSL N1-067]
 gi|313637811|gb|EFS03155.1| putative metalloprotease [Listeria seeligeri FSL S4-171]
          Length = 161

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 10/120 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCSSLMLGDI 104
            ELSL FT +  I  +N EYR  D+ T+V+SF             +   D  +  MLGDI
Sbjct: 40  TELSLTFTTNEGIREINREYRNKDQATDVISFALEELGEGETEIDWGEFDLETPKMLGDI 99

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E  E +A   G      L  L +HG LHLLGYDH++  +  +M GL++ +L+  G+
Sbjct: 100 IISTEKAEEQAKDYGHSKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKEVLDAYGL 159


>gi|291612931|ref|YP_003523088.1| hypothetical protein Slit_0460 [Sideroxydans lithotrophicus ES-1]
 gi|291583043|gb|ADE10701.1| protein of unknown function UPF0054 [Sideroxydans lithotrophicus
           ES-1]
          Length = 152

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 12/141 (8%)

Query: 34  VVFAKAVSNLISKGYFVK------ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           V +A     L ++  F +      E  V++SL   +     TLN ++RG D  TNVL+F 
Sbjct: 15  VQYASNAGKLPTRQQFRRWAKAALERDVQISLRLVNEAEGRTLNRDFRGKDYATNVLTF- 73

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                 D    L  GD+V+   ++  EA   GK+   H  HL+IH  LHL GYDH   +D
Sbjct: 74  ----VYDDTVPLS-GDVVICVPVVAREAKEQGKDLFAHYAHLVIHAVLHLQGYDHEKKRD 128

Query: 148 ACVMEGLERSILEDLGINDPY 168
           A  ME  E +++  L    PY
Sbjct: 129 AEKMEARETALMLKLRYPAPY 149


>gi|269120554|ref|YP_003308731.1| hypothetical protein Sterm_1944 [Sebaldella termitidis ATCC 33386]
 gi|268614432|gb|ACZ08800.1| protein of unknown function UPF0054 [Sebaldella termitidis ATCC
           33386]
          Length = 152

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 3/96 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEA 115
           +S + T +  I+ +N EYRG D PT+V+SF  A+  ++      +LGDI+++ E +  +A
Sbjct: 43  VSFLITTNDVIQNINSEYRGKDTPTDVISF--AYNETENIGPFDILGDIIISAEKVTEQA 100

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
              G   E    +++ HG LHLLGYDH+DD+D  VM
Sbjct: 101 KEYGHSTEREFYYVLCHGMLHLLGYDHIDDEDKKVM 136


>gi|296314907|ref|ZP_06864848.1| putative metalloprotease [Neisseria polysaccharea ATCC 43768]
 gi|296838092|gb|EFH22030.1| putative metalloprotease [Neisseria polysaccharea ATCC 43768]
          Length = 171

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 14/125 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------PTAFASSDGCSSLMLGDIVL 106
            ++SL+  D       N +YRG D  TNVLSF        P  F  SDG    + GD+V+
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQF--SDG----LYGDLVI 104

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
             +++  EA    K  E H  HL IHG LHL+GYDH++D +A +ME  E  ++  +G  +
Sbjct: 105 CPQVVLKEAAEQDKTPEQHFAHLTIHGTLHLMGYDHIEDNEAEIMEAEEIRLMLAVGFPN 164

Query: 167 PYEVD 171
           PY+ D
Sbjct: 165 PYQED 169


>gi|206891031|ref|YP_002248706.1| hypothetical protein THEYE_A0868 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|254806638|sp|B5YKE1|RRMF_THEYD RecName: Full=Probable rRNA maturation factor
 gi|206742969|gb|ACI22026.1| conserved hypothetical protein, putative [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 159

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S++F    +++ LN +YRG +  T++LSFP  +  ++   +L LG+I++  + +  +A 
Sbjct: 53  ISVIFVGDQKMKELNSKYRGKNSVTDILSFP--YLENEPSGNLFLGEIIINPKKVFSQAK 110

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
              K F   L  ++ HG LHLLGYDH V D +A  M  LE+ IL +L
Sbjct: 111 QYNKTFWQELDRILAHGILHLLGYDHEVSDSEARKMRKLEQKILSNL 157


>gi|160902312|ref|YP_001567893.1| hypothetical protein Pmob_0846 [Petrotoga mobilis SJ95]
 gi|189040617|sp|A9BHG1|RRMF_PETMO RecName: Full=Probable rRNA maturation factor
 gi|160359956|gb|ABX31570.1| protein of unknown function UPF0054 [Petrotoga mobilis SJ95]
          Length = 143

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 15/140 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I V N     EI+ + + ++   K + N + KG F      EL+++ TD   I   N 
Sbjct: 1   MKINVINQQELREINSKKIKDIA-KKVLLNEVGKGNF------ELNILITDDKSITEFN- 52

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +YRG   PT+VLSF      S G S  ++GDIV++ E IE +A   G  FE    +++IH
Sbjct: 53  KYRGKSTPTDVLSF------SYGLSEPVIGDIVISVESIEKQAPDFGNSFEEEFYYILIH 106

Query: 133 GFLHLLGYDHVD-DKDACVM 151
           G LH++GYDH + ++DA  M
Sbjct: 107 GLLHIVGYDHENSEEDAKKM 126


>gi|240125026|ref|ZP_04737912.1| hypothetical protein NgonSK_02174 [Neisseria gonorrhoeae SK-92-679]
 gi|254493055|ref|ZP_05106226.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268683613|ref|ZP_06150475.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|226512095|gb|EEH61440.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268623897|gb|EEZ56297.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
          Length = 171

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++ L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH+ D +A +ME  E  ++   G  +PY  D
Sbjct: 111 KEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAAGYPNPYRED 169


>gi|160945168|ref|ZP_02092394.1| hypothetical protein FAEPRAM212_02687 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442899|gb|EDP19904.1| hypothetical protein FAEPRAM212_02687 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105595|emb|CBL03139.1| conserved hypothetical protein TIGR00043 [Faecalibacterium
           prausnitzii SL3/3]
          Length = 163

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGCSSLMLGDIVLAY 108
            E+S+ F D+  I  LN +YR    PT+VLSFP           ++GC  +MLGDIV++ 
Sbjct: 41  AEISVTFVDNAAIAELNNQYRNKPMPTDVLSFPLGENGKYDIDENNGC--MMLGDIVISM 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGI 164
           E    +AN+ G   +  +  L +H  LHLLGYDH +   +A  M   E ++L  LG+
Sbjct: 99  ERAMEQANLYGHPLQREVAFLTVHSMLHLLGYDHENGGLEAMRMREKEEAVLLQLGL 155


>gi|296188183|ref|ZP_06856575.1| metalloprotein, YbeY/ UPF0054family [Clostridium carboxidivorans
           P7]
 gi|296047309|gb|EFG86751.1| metalloprotein, YbeY/ UPF0054family [Clostridium carboxidivorans
           P7]
          Length = 166

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 17/122 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GCSS 98
           E+S++F D+ +I+ +N E R IDK T+VLSFP                  F+  D    S
Sbjct: 39  EVSVIFVDNEKIKEINKENRNIDKVTDVLSFPMLDYEKGKVFKDTYKDFNFSHVDLDEGS 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIVL+ E  + ++      F   +V+L IH  LHLLGYDH+++ +  +M   E  I
Sbjct: 99  LVLGDIVLSLEKAKEQSLEFNHSFIREVVYLTIHSVLHLLGYDHMEEDEKSIMRKREEQI 158

Query: 159 LE 160
           LE
Sbjct: 159 LE 160


>gi|118467556|ref|YP_888768.1| metalloprotease [Mycobacterium smegmatis str. MC2 155]
 gi|166227261|sp|A0R0T0|RRMF_MYCS2 RecName: Full=Probable rRNA maturation factor
 gi|118168843|gb|ABK69739.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 178

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 11/132 (8%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             LIS   FV E +      ELS+V  DS  +  L+  +  +  PT+V+SFP       G
Sbjct: 16  PELISVARFVIEKMDVHPAAELSMVLLDSAAMADLHMRWMDLPGPTDVMSFPMDELEPGG 75

Query: 96  ------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                     MLGDIVL  E  E +A   G    + L  L +HG LHLLGYDH +  +  
Sbjct: 76  RPDAPEPGPAMLGDIVLCPEFAEQQAAKAGHSLGHELALLTVHGVLHLLGYDHAEPDEEK 135

Query: 150 VMEGLERSILED 161
            M  L+R +LE+
Sbjct: 136 EMFALQRQLLEE 147


>gi|332707781|ref|ZP_08427808.1| conserved hypothetical protein TIGR00043 [Lyngbya majuscula 3L]
 gi|332353484|gb|EGJ32997.1| conserved hypothetical protein TIGR00043 [Lyngbya majuscula 3L]
          Length = 175

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 7/121 (5%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS-------LMLGDIV 105
           N  ELSL  TD+  I+ LN +YR  ++PT+VL+F     +S   S        L LGDIV
Sbjct: 53  NSYELSLRLTDNSEIQALNSQYRKKNQPTDVLAFAALEVNSPKLSPQKQLSVPLYLGDIV 112

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +    +A   G      L  L  HG LHLLG+DH D++    M   + ++L+ +G++
Sbjct: 113 ISVDTAVQQAKQHGHSVSTELAWLATHGLLHLLGWDHPDEESLLRMLDQQETLLQSVGLS 172

Query: 166 D 166
           +
Sbjct: 173 N 173


>gi|320160837|ref|YP_004174061.1| hypothetical protein ANT_14330 [Anaerolinea thermophila UNI-1]
 gi|319994690|dbj|BAJ63461.1| hypothetical protein ANT_14330 [Anaerolinea thermophila UNI-1]
          Length = 150

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++++   +   +++LN ++ G + PT+VLSF   F   +      LGDI+++YE  E +A
Sbjct: 36  DVTISIQNDEALKSLNAQFMGTEAPTDVLSFTMDFFDPE-TERQYLGDILISYERAEEQA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
              G   EN L+ LI+HG LHL+GYDH  +++   M   +  IL+ LG
Sbjct: 95  QTAGHSTENELILLIVHGILHLVGYDHGTEEEKSKMWKTQSEILKQLG 142


>gi|240013460|ref|ZP_04720373.1| hypothetical protein NgonD_02219 [Neisseria gonorrhoeae DGI18]
 gi|240015899|ref|ZP_04722439.1| hypothetical protein NgonFA_01822 [Neisseria gonorrhoeae FA6140]
 gi|240080039|ref|ZP_04724582.1| hypothetical protein NgonF_01825 [Neisseria gonorrhoeae FA19]
 gi|240112248|ref|ZP_04726738.1| hypothetical protein NgonM_01454 [Neisseria gonorrhoeae MS11]
 gi|240114993|ref|ZP_04729055.1| hypothetical protein NgonPID1_01852 [Neisseria gonorrhoeae PID18]
 gi|240117278|ref|ZP_04731340.1| hypothetical protein NgonPID_02274 [Neisseria gonorrhoeae PID1]
 gi|240120531|ref|ZP_04733493.1| hypothetical protein NgonPI_01904 [Neisseria gonorrhoeae PID24-1]
 gi|240127539|ref|ZP_04740200.1| hypothetical protein NgonS_02629 [Neisseria gonorrhoeae SK-93-1035]
 gi|260441192|ref|ZP_05795008.1| hypothetical protein NgonDG_08936 [Neisseria gonorrhoeae DGI2]
 gi|268598309|ref|ZP_06132476.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268600661|ref|ZP_06134828.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268602973|ref|ZP_06137140.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268685916|ref|ZP_06152778.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|145572757|sp|Q5FA84|RRMF_NEIG1 RecName: Full=Probable rRNA maturation factor
 gi|268582440|gb|EEZ47116.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268584792|gb|EEZ49468.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268587104|gb|EEZ51780.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268626200|gb|EEZ58600.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 171

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++ L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH+ D +A +ME  E  ++   G  +PY  D
Sbjct: 111 KEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAAGYPNPYRED 169


>gi|239998277|ref|ZP_04718201.1| Putative metalloprotease NGO0145 [Neisseria gonorrhoeae 35/02]
          Length = 171

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
            ++ L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++ 
Sbjct: 51  ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL IHG LHL+GYDH+ D +A +ME  E  ++   G  +PY  D
Sbjct: 111 KEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAAGYPNPYRED 169


>gi|124268424|ref|YP_001022428.1| hypothetical protein Mpe_A3240 [Methylibium petroleiphilum PM1]
 gi|171769843|sp|A2SKV4|RRMF_METPP RecName: Full=Probable rRNA maturation factor
 gi|124261199|gb|ABM96193.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 149

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 8/114 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           + + +V TD  R   LN +YR  D  TNVL+F            +++ D++L   ++E E
Sbjct: 43  ITVRIVGTDEGR--ALNRDYRQKDYATNVLTF------DYEAEPVVVADLILCAPVVERE 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           A   G+  E H  HL++HG LH  G+DH  + +A  ME  E  +L  LG  DPY
Sbjct: 95  ARDEGRSLEAHYAHLLVHGTLHAQGHDHEIEAEAQAMEARETEVLRALGYADPY 148


>gi|169824430|ref|YP_001692041.1| putative metal-dependent hydrolase [Finegoldia magna ATCC 29328]
 gi|238687740|sp|B0S1B1|RRMF_FINM2 RecName: Full=Probable rRNA maturation factor
 gi|167831235|dbj|BAG08151.1| putative metal-dependent hydrolase [Finegoldia magna ATCC 29328]
          Length = 153

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 6/111 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--TAFASSDGCSSLMLGDIVLAYEIIEI 113
           E+SL F     I  LN +YR  D  T+VLSFP    FA      + +LGDI++  +    
Sbjct: 40  EISLSFVSESEIRKLNSDYRDKDSVTDVLSFPLDDDFA----IQTNLLGDIIICCKRAIE 95

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +A       +  +V+L++H   HLLGYDH+D+ D  +M   E+S L+++GI
Sbjct: 96  QAKEYNHSIKREIVYLVVHSMFHLLGYDHIDESDRIIMRNKEKSALKEIGI 146


>gi|91762483|ref|ZP_01264448.1| hypothetical protein PU1002_04421 [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718285|gb|EAS84935.1| hypothetical protein PU1002_04421 [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 153

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E ALW  +I         F  ++     K Y      + L+++ +++  I+ L
Sbjct: 2   IKIDVVSECALWSKKIKRNK----TFFNSILKFFPKKYKFIGKKINLTILLSNNKNIKKL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++R  +KPT+VLSFP      +   S  LGDIV++YE +    N+   EF+  +V + 
Sbjct: 58  NKDFRNKNKPTDVLSFPFE-KKFNPKKSNYLGDIVISYEFMNKPKNISILEFKQKVVKIF 116

Query: 131 IHGFLHLLGYDHVDDKDACVM 151
           IHGFLHLLG+DH+  KD   M
Sbjct: 117 IHGFLHLLGHDHIKLKDFKKM 137


>gi|197303388|ref|ZP_03168427.1| hypothetical protein RUMLAC_02110 [Ruminococcus lactaris ATCC
           29176]
 gi|197297386|gb|EDY31947.1| hypothetical protein RUMLAC_02110 [Ruminococcus lactaris ATCC
           29176]
          Length = 165

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------------TAFASSDGCSS 98
            E++L+ T++  I  +N E RGID+PT+VLSFP                T  A +     
Sbjct: 38  AEINLLLTENQEIHEMNLEQRGIDRPTDVLSFPMIEYDAPGDFSVIDEETGDAFNPETGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           LMLGDIV++ E +  +A   G   +     LI H  LHL GYDH+++++   ME  +R+I
Sbjct: 98  LMLGDIVISKEKVLSQAEEYGHSPKREYAFLIAHSMLHLFGYDHMEEEERAEMEAHQRAI 157

Query: 159 LEDLGI 164
           +E +GI
Sbjct: 158 MEKVGI 163


>gi|34763927|ref|ZP_00144826.1| Hypothetical Metal-Binding Protein [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886298|gb|EAA23575.1| Hypothetical Metal-Binding Protein [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 162

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LSL+ TD+  I+ +N EYR  + PT+V+SF  A+  ++  +      LGDI+++ E +E 
Sbjct: 50  LSLLLTDNENIQVINREYRDKNAPTDVISF--AYHETEDFNIGPYDTLGDIIISLERVEE 107

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +A      FE    +++ HG LH+LGYDH+++ D  +M   E +IL   G
Sbjct: 108 QATEYNHLFEREFYYVLTHGILHILGYDHIEEDDKKLMREREEAILSSFG 157


>gi|222109709|ref|YP_002551973.1| hypothetical protein Dtpsy_0491 [Acidovorax ebreus TPSY]
 gi|254803969|sp|B9MCH3|RRMF_ACIET RecName: Full=Probable rRNA maturation factor
 gi|221729153|gb|ACM31973.1| protein of unknown function UPF0054 [Acidovorax ebreus TPSY]
          Length = 152

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++    +   + LN E+R  D  TNVL+F            + + D+VL   ++E E
Sbjct: 42  AEITVRIVGAEEGQRLNREFRHKDYATNVLTFDY------QQEPVAVADLVLCAPVVERE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K  E H  HL++HG LH  G+DH   ++DA  ME  E +IL++LG  DPY
Sbjct: 96  AREQNKTLEEHYAHLLVHGTLHAQGWDHETSEQDAQEMEVYETAILQELGFADPY 150


>gi|315452585|ref|YP_004072855.1| putative metalloprotease HPK [Helicobacter felis ATCC 49179]
 gi|315131637|emb|CBY82265.1| putative metalloprotease HPK [Helicobacter felis ATCC 49179]
          Length = 146

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 7/104 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV  DS RI+ LN +YRG+DK T+VLSFP    + +     +LG +V+  E  ++EA 
Sbjct: 35  VELVLVDSERIQELNRDYRGVDKSTDVLSFPIEMPAQN-----LLGSVVINVECAQMEAQ 89

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
             G    + L  L +HG+LHLLGYDH  +KD      LE  +++
Sbjct: 90  KRGHSLLDELRLLFLHGYLHLLGYDH--EKDNGEQRALEEEMIQ 131


>gi|315038513|ref|YP_004032081.1| Metalloprotease [Lactobacillus amylovorus GRL 1112]
 gi|312276646|gb|ADQ59286.1| Metalloprotease [Lactobacillus amylovorus GRL 1112]
          Length = 174

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 17/135 (12%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML- 101
           L++K    K+N +E+S+ F D      +N +YR  D+PT+V+SF    A  DG  S+ L 
Sbjct: 31  LLAKKEIGKDNNLEMSINFVDEDCSHEINLKYRDKDRPTDVISF----AIEDGEDSIDLA 86

Query: 102 ------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       GD+ +   +I+  +   G  F+    + ++HGFLHL GYDH+   +A 
Sbjct: 87  AFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFGYTVVHGFLHLNGYDHIKPDEAK 146

Query: 150 VMEGLERSILEDLGI 164
            M G++  +LED G+
Sbjct: 147 EMFGIQGKVLEDYGL 161


>gi|257439766|ref|ZP_05615521.1| putative metalloprotease [Faecalibacterium prausnitzii A2-165]
 gi|257197786|gb|EEU96070.1| putative metalloprotease [Faecalibacterium prausnitzii A2-165]
          Length = 163

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGCSSLMLGDIVLAY 108
            E+S+ F D+  I  LN +YR    PT+VLSFP           ++GC   MLGDIV++ 
Sbjct: 41  AEISVTFVDNAAIAELNNQYRNKPMPTDVLSFPLGENGVYDVDENNGCK--MLGDIVISM 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGI 164
           E  + +A + G   +  +  L +H  LHLLGYDH +   +A  M   E ++L  LG+
Sbjct: 99  ERAQEQATLYGHPLQREVAFLTVHSMLHLLGYDHENGGLEAMRMREKEEAVLTQLGL 155


>gi|296137315|ref|YP_003644557.1| protein of unknown function UPF0054 [Thiomonas intermedia K12]
 gi|295797437|gb|ADG32227.1| protein of unknown function UPF0054 [Thiomonas intermedia K12]
          Length = 175

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++L F  +     LN  YRG D  TNVL+F       D     +  DIVL   ++  EA
Sbjct: 61  QITLRFVAADEGRALNRAYRGKDYATNVLTF-------DYSHWPVQADIVLCCPVVAGEA 113

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  HL+IHG LH  G+DH  + +A  ME  E ++L+  GI+DPY
Sbjct: 114 LAQHKPLGSHYAHLVIHGLLHAQGWDHQTELEAQEMERHEVTVLQRFGISDPY 166


>gi|251781164|ref|ZP_04824084.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243085479|gb|EES51369.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 166

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 17/126 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------------TAFASSD-GCSS 98
           E+SL+F D+  I  +N E R ID+ T+VLSFP                  F+ +D     
Sbjct: 39  EISLLFVDNEEIREINNETRNIDRATDVLSFPMLDYPDKKVFKEVYTENDFSEADFDGDD 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIVL+ E    ++      +E    +L++H  LHLLGYDH++++D   M   E  I
Sbjct: 99  LVLGDIVLSLERALEQSKEYNHSYEREASYLVVHSVLHLLGYDHMEEEDKVKMRKREEEI 158

Query: 159 LEDLGI 164
           L  L I
Sbjct: 159 LTALDI 164


>gi|313884192|ref|ZP_07817958.1| translation metalloprotein YbeY [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620639|gb|EFR32062.1| translation metalloprotein YbeY [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 157

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 12/151 (7%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENI-VELSLVFTDSHRIETLNFEYRGIDKPTN 82
           D+ +  +  +V   + V  L  +   + +N  V++S+V  ++  I  LN +YR ID+PT+
Sbjct: 7   DDNNFLSQAQVELVQDVIKLAGQKLILPDNFEVDISIVTNEA--IHELNRDYRNIDRPTD 64

Query: 83  VLSFP-------TAFASSDGCSSL--MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           VLSF          F   D    L   LGDI++++  I+ +A   G  FE  L  L +HG
Sbjct: 65  VLSFALEETAEDDPFGQIDMSEELGIFLGDIIISFPKIQEQATEYGHSFERELAFLAVHG 124

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           FLHL GYDH        M GL+  +L   G+
Sbjct: 125 FLHLNGYDHQSPDQEKEMFGLQEEVLSAYGL 155


>gi|295100850|emb|CBK98395.1| conserved hypothetical protein TIGR00043 [Faecalibacterium
           prausnitzii L2-6]
          Length = 163

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGCSSLMLGDIVLAY 108
            E+S+ F D+  I  LN +YR    PT+VLSFP           ++GC   MLGDIV++ 
Sbjct: 41  AEISVTFVDNAAIAELNNQYRNKPMPTDVLSFPLGENGVYDVDENNGCK--MLGDIVISM 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGI 164
           E  + +A + G   +  +  L +H  LHLLGYDH +   +A  M   E ++L  LG+
Sbjct: 99  ERAQEQATLYGHPLQREVAFLTVHSMLHLLGYDHENGGLEAMRMREKEEAVLTQLGL 155


>gi|16331480|ref|NP_442208.1| metalloprotease [Synechocystis sp. PCC 6803]
 gi|2496791|sp|Q55142|RRMF_SYNY3 RecName: Full=Probable rRNA maturation factor
 gi|1001136|dbj|BAA10278.1| slr0053 [Synechocystis sp. PCC 6803]
          Length = 179

 Score = 73.9 bits (180), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 6/118 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGCSSLMLGDIVLAYE 109
           EL+L+FT   RI+ LN ++R  DKPT+VL+F           S +    L LGDIV++ E
Sbjct: 59  ELTLLFTGDRRIQELNRKFRHQDKPTDVLAFAALEGDFPLIESEETEEPLYLGDIVISLE 118

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
             + +A   G   +  +V L  HG LHLLG+DH D+     M   +  +L  +G N P
Sbjct: 119 RADHQARERGHSAKLEVVWLTAHGLLHLLGWDHPDEASLTTMLSEQSHLLTLIGQNPP 176


>gi|317495248|ref|ZP_07953618.1| hypothetical protein HMPREF0432_00220 [Gemella moribillum M424]
 gi|316914670|gb|EFV36146.1| hypothetical protein HMPREF0432_00220 [Gemella moribillum M424]
          Length = 157

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 7/122 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-------G 102
           +   I E+SL F     I+ +N +YRG D PT+V+SF       D    + L       G
Sbjct: 34  INTKITEMSLSFVSKEEIQEINRDYRGKDVPTDVISFALNDEIEDEVHIIGLEDEFNSIG 93

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI++  +I   +A      F+  +  L +HGFLHLLGYDH++++D   M   + +ILE+ 
Sbjct: 94  DIIICVDIAREQAQEYNHSFDREIGFLAVHGFLHLLGYDHMNEEDEKEMFDKQEAILEEF 153

Query: 163 GI 164
           G+
Sbjct: 154 GL 155


>gi|212638691|ref|YP_002315211.1| putative metal-dependent hydrolase [Anoxybacillus flavithermus WK1]
 gi|212560171|gb|ACJ33226.1| Predicted metal-dependent hydrolase [Anoxybacillus flavithermus
           WK1]
          Length = 194

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIVLAY 108
            E+S+ F D+ +I  +N +YRG D+PT+V+SF       +  +        +LGDI+++ 
Sbjct: 77  AEVSVTFVDNEKIREINRDYRGKDQPTDVISFALEEMGEEEIAIVGADVPPVLGDIIISV 136

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                +A   G  F   L  L +HGFLHLLGYDH  +++  VM   +  +L+  G+ 
Sbjct: 137 PKAREQAEQYGHSFMRELGFLAVHGFLHLLGYDHETEEEEKVMFAKQEQLLQQFGLT 193


>gi|257865831|ref|ZP_05645484.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257872166|ref|ZP_05651819.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257875459|ref|ZP_05655112.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257799765|gb|EEV28817.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257806330|gb|EEV35152.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257809625|gb|EEV38445.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 158

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM----------LGDI 104
            E+S+ F D+  I+ +N EYRG D PT+V+SF     + +  S +           LGDI
Sbjct: 37  TEMSVTFMDNAAIQEINREYRGKDMPTDVISFAFEEETDEELSIIFDEALEELPRDLGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E  + +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+
Sbjct: 97  MISIERAKEQAAEYGHTYDRELGFLALHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGL 156

Query: 165 N 165
            
Sbjct: 157 K 157


>gi|283797897|ref|ZP_06347050.1| putative metalloprotease [Clostridium sp. M62/1]
 gi|291074362|gb|EFE11726.1| putative metalloprotease [Clostridium sp. M62/1]
 gi|295091897|emb|CBK78004.1| conserved hypothetical protein TIGR00043 [Clostridium cf.
           saccharolyticum K10]
 gi|295115184|emb|CBL36031.1| conserved hypothetical protein TIGR00043 [butyrate-producing
           bacterium SM4/1]
          Length = 165

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 20/123 (16%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------------------FASSDGC 96
            E++++ TD   I  +N E+RGID+ T+VLSFP A                  F    G 
Sbjct: 38  AEVNVLLTDDEEIHRINREFRGIDRATDVLSFPMADYEQPAEFEKLEERPEDYFNPETG- 96

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             L+LGDIV++ + +E +A   G      L  L  H  LHL GYDH+++++  VME  + 
Sbjct: 97  -ELLLGDIVISVDKVEEQAEKYGHSEARELAFLTAHSMLHLFGYDHMEEEERLVMEKKQE 155

Query: 157 SIL 159
           +IL
Sbjct: 156 AIL 158


>gi|113866555|ref|YP_725044.1| unkown domain/putative metalloprotease fusion protein [Ralstonia
           eutropha H16]
 gi|113525331|emb|CAJ91676.1| diacylglycerol kinase [Ralstonia eutropha H16]
          Length = 248

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L++ F D     TLN  YRG D  TNVL+F  A    D  +    GDIVL   ++E EA 
Sbjct: 135 LTIRFVDEEEGRTLNRTYRGKDYATNVLTFAYAENEEDPVT----GDIVLCCPVVETEAR 190

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              K  E H  HLI+HG LH  GY+H +D +A  ME +E   L+ LG  DPY+ D
Sbjct: 191 EQRKPLEAHYAHLIVHGVLHAQGYEHEEDAEAEEMEAIETETLQALGYADPYQGD 245


>gi|317128316|ref|YP_004094598.1| hypothetical protein Bcell_1604 [Bacillus cellulosilyticus DSM
           2522]
 gi|315473264|gb|ADU29867.1| protein of unknown function UPF0054 [Bacillus cellulosilyticus DSM
           2522]
          Length = 156

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 6/116 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYE 109
            E+S+ F +  +I+ LN EYR  D+PT+VLSF          + +G   L LGDI+++  
Sbjct: 41  AEVSITFVEDDKIQELNREYRDKDQPTDVLSFALNEGDQQPITGEGLPEL-LGDIIISVP 99

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             + +A   G  F   L  L +HGFLHLLGYDH  +++   M   +  ILE  G+ 
Sbjct: 100 RAKQQAEEYGHGFNRELCFLAVHGFLHLLGYDHNTEEEEREMFKKQEEILEKYGLK 155


>gi|330686100|gb|EGG97721.1| translation metalloprotein YbeY [Staphylococcus epidermidis VCU121]
          Length = 155

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 5/115 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS-----LMLGDIVLAYE 109
            ELS+ F D   I+ +N  YR  DK T+V+SF       D   S      +LGDI++  +
Sbjct: 38  AELSITFVDKSEIQEINKMYRDKDKVTDVISFALEEDEPDIDMSEFNIPRVLGDIIICTD 97

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           + + ++   G  FE  L  L +HGFLHLLGYDH++++D   M G + +IL   G+
Sbjct: 98  VAQEQSESYGHSFERELGFLALHGFLHLLGYDHMNEEDEKEMFGRQDAILNAYGL 152


>gi|239637618|ref|ZP_04678590.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239596836|gb|EEQ79361.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 155

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 5/116 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS-----LMLGDIVLAYE 109
            ELS+ F D   I+ +N  YR  DK T+V+SF       D   S      +LGDI++  +
Sbjct: 38  AELSITFVDKSEIQEINKMYRDKDKVTDVISFALEEDEPDIDMSEFDIPRVLGDIIICTD 97

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + + ++   G  FE  L  L +HGFLHLLGYDH++++D   M G + +IL   G+ 
Sbjct: 98  VAQEQSESYGHSFERELGFLALHGFLHLLGYDHMNEEDEKEMFGRQDAILNAYGLT 153


>gi|326203510|ref|ZP_08193374.1| protein of unknown function UPF0054 [Clostridium papyrosolvens DSM
           2782]
 gi|325986330|gb|EGD47162.1| protein of unknown function UPF0054 [Clostridium papyrosolvens DSM
           2782]
          Length = 161

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 17/150 (11%)

Query: 32  CEVVFAKAVSNLISKGY---FVKENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
            +V+  K + NLI K        E +    E+S++  D + I  +N E+R IDK T+VLS
Sbjct: 9   AKVIIDKKIENLIEKTIKMCMKSEQLDKDYEVSVLIVDDNEIRDINREHRDIDKSTDVLS 68

Query: 86  FP------TAFASSDG-----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           FP          S +G        L+LGDI+++ E  + +A   G  F+  +  L  H  
Sbjct: 69  FPLVDFKDGKLISDEGDYDLEMGELILGDIIISAETAQRQAEAYGHSFDREMAFLTAHSC 128

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            HLLGYDH++  +  +M   +  IL+++G+
Sbjct: 129 FHLLGYDHMEKNEEEIMFKKQEDILKEMGL 158


>gi|307243719|ref|ZP_07525859.1| translation metalloprotein YbeY [Peptostreptococcus stomatis DSM
           17678]
 gi|306492928|gb|EFM64941.1| translation metalloprotein YbeY [Peptostreptococcus stomatis DSM
           17678]
          Length = 153

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 10/116 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYE 109
           E+SL F  +  I  +N +YR IDK T+VLSFP      DG        ++ LGDIV++ E
Sbjct: 40  EVSLSFVSNDEIREINRDYRNIDKVTDVLSFPMY----DGEEVDVDFGAISLGDIVISIE 95

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
               +A   G   E  +  L+ H   HLLGYDH+++++A  M   E  +L  LGI 
Sbjct: 96  RAADQAKDFGHSLEREVCFLVCHSMFHLLGYDHMEEEEAKEMHAKEEDVLSQLGIT 151


>gi|167972975|ref|ZP_02555252.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 5 str. ATCC 27817]
 gi|167973948|ref|ZP_02556225.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 11 str. ATCC 33695]
 gi|167975657|ref|ZP_02557934.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 12 str. ATCC 33696]
 gi|167988132|ref|ZP_02569803.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 7 str. ATCC 27819]
 gi|168362746|ref|ZP_02695920.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 13 str. ATCC 33698]
 gi|195867954|ref|ZP_03079951.1| putative metalloprotease [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273580|ref|ZP_03206116.1| putative metalloprotease [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554156|ref|YP_002284937.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 10 str. ATCC 33699]
 gi|225550362|ref|ZP_03771311.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 2 str. ATCC 27814]
 gi|225551596|ref|ZP_03772542.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 8 str. ATCC 27618]
 gi|226702100|sp|B5ZBZ7|RRMF_UREU1 RecName: Full=Probable rRNA maturation factor
 gi|171903176|gb|EDT49465.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 13 str. ATCC 33698]
 gi|184209105|gb|EDU06148.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 5 str. ATCC 27817]
 gi|188019077|gb|EDU57117.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 7 str. ATCC 27819]
 gi|188998095|gb|EDU67192.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 11 str. ATCC 33695]
 gi|195659878|gb|EDX53258.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 12 str. ATCC 33696]
 gi|195660350|gb|EDX53610.1| putative metalloprotease [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198250100|gb|EDY74880.1| putative metalloprotease [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541657|gb|ACI59886.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 10 str. ATCC 33699]
 gi|225379411|gb|EEH01776.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 8 str. ATCC 27618]
 gi|225379516|gb|EEH01878.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 2 str. ATCC 27814]
          Length = 155

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 12/146 (8%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           +++ DEI+L+        + ++NLIS K    KE   E    F D   I+ +N +YR  D
Sbjct: 11  SVFNDEIYLQRF------EQIANLISIKLNIDKERFFECH--FVDEKTIQEINRDYRNKD 62

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
             T+V+SF  AF   +  + L LG++ + Y+ +  +A   G  FE  L  L  HG LHLL
Sbjct: 63  YITDVISF--AFDDGEIITPL-LGEMYICYQKVVNQAKEFGHSFERELCFLFTHGLLHLL 119

Query: 139 GYDHVDDKDACVMEGLERSILEDLGI 164
           GYDH++ ++  +M GL+  IL +L I
Sbjct: 120 GYDHIEVEEEKIMFGLQDEILNELNI 145


>gi|213161076|ref|ZP_03346786.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 78

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 46/69 (66%)

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGD+++  +++E EA    K  E H  H+++HG LHLLGYDH+DD +A  ME LE  I+
Sbjct: 3   LLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIM 62

Query: 160 EDLGINDPY 168
             +G  DPY
Sbjct: 63  LAMGYEDPY 71


>gi|297584645|ref|YP_003700425.1| hypothetical protein Bsel_2356 [Bacillus selenitireducens MLS10]
 gi|297143102|gb|ADH99859.1| protein of unknown function UPF0054 [Bacillus selenitireducens
           MLS10]
          Length = 156

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 18/145 (12%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           L+ + +V+F+   +  I  G        E+S+      RI+ LN +YR  D+PT+VLSF 
Sbjct: 22  LQLIRDVLFSAMKAEDIPMG-------TEVSVSIVTDGRIQELNRDYREKDRPTDVLSF- 73

Query: 88  TAFASSDGCSSL-------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
              A  DG   +       MLGDI+++   +  +++  G  FE  L  L +HGFLHL GY
Sbjct: 74  ---ALHDGEEQIIAPTIPDMLGDIIISLPAVYRQSDEYGHSFERELAFLTVHGFLHLCGY 130

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH ++ D   M   +  +L   GI 
Sbjct: 131 DHENEADEQKMFARQEELLTAYGIQ 155


>gi|86159141|ref|YP_465926.1| hypothetical protein Adeh_2719 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123498733|sp|Q2ILG1|RRMF_ANADE RecName: Full=Probable rRNA maturation factor
 gi|85775652|gb|ABC82489.1| protein of unknown function UPF0054 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 193

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS++     RI TLN E+R  D+ T+VLSFP +     G    +LGD+V++ +     
Sbjct: 35  AELSILLVTDRRIRTLNREWRQKDQATDVLSFPISEPPGAGA---LLGDVVISLDTAARR 91

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           A   G+     L   + HG LHLLGYDH    DA  M
Sbjct: 92  ARSDGRRVGAELDRYLAHGILHLLGYDHERPADARAM 128


>gi|327440938|dbj|BAK17303.1| predicted metal-dependent hydrolase [Solibacillus silvestris
           StLB046]
          Length = 161

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           E+  E+S+ F  +  I  +N EYR  D+PT+V+SF            +      +LGDI+
Sbjct: 35  EDGSEVSVTFVTNEAIHEINREYRDKDQPTDVISFALEEMGEGELQIIGEGIPRILGDII 94

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +    +A   G  FE  L  L +HGFLHLLGYDH+  +D  VM G + +IL+  G+ 
Sbjct: 95  ISTDRTREQAAEYGHTFERELGFLAVHGFLHLLGYDHMTREDEKVMFGKQDTILQSYGLG 154


>gi|260886787|ref|ZP_05898050.1| putative metalloprotease [Selenomonas sputigena ATCC 35185]
 gi|330839401|ref|YP_004413981.1| protein of unknown function UPF0054 [Selenomonas sputigena ATCC
           35185]
 gi|260863386|gb|EEX77886.1| putative metalloprotease [Selenomonas sputigena ATCC 35185]
 gi|329747165|gb|AEC00522.1| protein of unknown function UPF0054 [Selenomonas sputigena ATCC
           35185]
          Length = 179

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            E+S+  TD   I  LN EYR ID+PT+V+SF        A + G +  +LGDIVL+ E 
Sbjct: 38  AEVSITLTDDAHIHVLNREYRRIDRPTDVISFALNESEEPAIAGGPAVNVLGDIVLSVER 97

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
              +A   G      +V L +HG LHLLGYDHV
Sbjct: 98  AAAQAADYGHSLRREIVFLTVHGMLHLLGYDHV 130


>gi|320529428|ref|ZP_08030516.1| conserved hypothetical protein TIGR00043 [Selenomonas artemidis
           F0399]
 gi|320138394|gb|EFW30288.1| conserved hypothetical protein TIGR00043 [Selenomonas artemidis
           F0399]
          Length = 154

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           GDE  +R   E V           G        E+S+  T+   I  +N +YRG+D+PT+
Sbjct: 18  GDEAAVRRAVETV-----------GRLYGAEGAEVSVTLTNDAYIHEINRQYRGVDRPTD 66

Query: 83  VLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           V+SF    +      D  +  +LGD+V++ E    +A   G  +   L  L +HG LHLL
Sbjct: 67  VISFALMESEEPEILDDPAGDVLGDLVISLERTRAQAEEYGHSYLRELSFLTVHGMLHLL 126

Query: 139 GYDHVDDKDACVMEGLERSILEDLGIN 165
           GYDH+++ +   ME  +R ++E LGI 
Sbjct: 127 GYDHMEEAERAEMEEEQRHVMEALGIG 153


>gi|310828432|ref|YP_003960789.1| hypothetical protein ELI_2845 [Eubacterium limosum KIST612]
 gi|308740166|gb|ADO37826.1| hypothetical protein ELI_2845 [Eubacterium limosum KIST612]
          Length = 156

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 10/121 (8%)

Query: 51  KENIV---ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSS------LM 100
           +EN++   E+S        I+ LN EYR IDK T+VLSFP   F   +   +      +M
Sbjct: 35  QENVLVPCEISFSLVIPEEIQELNAEYRNIDKETDVLSFPMLEFPEDEDMLTYETGIPVM 94

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDIV++      +A   G   E  + +L +H  LHLLGYDH+++ +  VM   E++I+ 
Sbjct: 95  LGDIVISTTRAAEQAEAYGHSLEREICYLSVHSVLHLLGYDHMEEDEKRVMRAREKAIMG 154

Query: 161 D 161
           D
Sbjct: 155 D 155


>gi|164686281|ref|ZP_02210311.1| hypothetical protein CLOBAR_02719 [Clostridium bartlettii DSM
           16795]
 gi|164601883|gb|EDQ95348.1| hypothetical protein CLOBAR_02719 [Clostridium bartlettii DSM
           16795]
          Length = 153

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS--SLMLGDIVLAYEIIEI 113
           E+SL F D+  I  LN EYRGID+ T+VLSFP       G       LGDIV++ E    
Sbjct: 40  EVSLSFVDNKEIHELNKEYRGIDRATDVLSFPLLVEDEFGVDFGEESLGDIVISLERAFE 99

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++      FE  +  L+ H   HLLGYDH  +++   M   E  IL  LGI
Sbjct: 100 QSREYNHSFEREVCFLVCHSMFHLLGYDHDTEENTKEMSQKEEYILNKLGI 150


>gi|145558833|sp|Q0KE95|RRMF_CUPNH RecName: Full=Probable rRNA maturation factor
          Length = 198

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L++ F D     TLN  YRG D  TNVL+F  A    D  +    GDIVL   ++E EA 
Sbjct: 85  LTIRFVDEEEGRTLNRTYRGKDYATNVLTFAYAENEEDPVT----GDIVLCCPVVETEAR 140

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              K  E H  HLI+HG LH  GY+H +D +A  ME +E   L+ LG  DPY+ D
Sbjct: 141 EQRKPLEAHYAHLIVHGVLHAQGYEHEEDAEAEEMEAIETETLQALGYADPYQGD 195


>gi|116629757|ref|YP_814929.1| metal-dependent hydrolase [Lactobacillus gasseri ATCC 33323]
 gi|238853406|ref|ZP_04643785.1| putative metalloprotease [Lactobacillus gasseri 202-4]
 gi|282851785|ref|ZP_06261148.1| metalloprotein, YbeY/ UPF0054family [Lactobacillus gasseri 224-1]
 gi|311110601|ref|ZP_07711998.1| putative metalloprotease [Lactobacillus gasseri MV-22]
 gi|122273305|sp|Q042Y1|RRMF_LACGA RecName: Full=Probable rRNA maturation factor
 gi|116095339|gb|ABJ60491.1| Predicted metal-dependent hydrolase [Lactobacillus gasseri ATCC
           33323]
 gi|238833978|gb|EEQ26236.1| putative metalloprotease [Lactobacillus gasseri 202-4]
 gi|282557027|gb|EFB62626.1| metalloprotein, YbeY/ UPF0054family [Lactobacillus gasseri 224-1]
 gi|311065755|gb|EFQ46095.1| putative metalloprotease [Lactobacillus gasseri MV-22]
          Length = 175

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 19/158 (12%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + DE++     +  +   ++NL+  +K    K+N  E+S+ F  S +I  +N +YRG D+
Sbjct: 8   FNDEVNFLKNDDKDWIPWITNLLLSAKKEINKKNAQEMSINFVSSEKIHEINKKYRGKDR 67

Query: 80  PTNVLSFPTAFASSDGCSSLML-------------GDIVLAYEIIEIEANVLGKEFENHL 126
           PT+V+SF    A  DG     +             GD+ L  E+I+  +      F    
Sbjct: 68  PTDVISF----AIEDGLDEDFMAAFNDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREF 123

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            + ++HG+LHL G+DH++D +A VM G++  +L + G+
Sbjct: 124 GYTLVHGYLHLNGFDHIEDDEAKVMFGIQGKVLREYGL 161


>gi|329766982|ref|ZP_08258510.1| hypothetical protein HMPREF0428_00207 [Gemella haemolysans M341]
 gi|328837707|gb|EGF87332.1| hypothetical protein HMPREF0428_00207 [Gemella haemolysans M341]
          Length = 157

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 7/122 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-------G 102
           V   I E+SL F     I+ +N +YRG D PT+V+SF       D    + L       G
Sbjct: 34  VDTEITEMSLSFVSKEEIQEINRDYRGKDVPTDVISFALNDEVEDEIDIIGLEDEINSIG 93

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           D+++  +I   +A      F+  +  L +HGFLHLLGYDH++++D   M G +  ILE  
Sbjct: 94  DVIICVDIAHEQAKEYEHSFDREIGFLAVHGFLHLLGYDHMNEEDEKEMFGKQDEILEKF 153

Query: 163 GI 164
           G+
Sbjct: 154 GL 155


>gi|118443989|ref|YP_878555.1| metalloprotease [Clostridium novyi NT]
 gi|145572747|sp|A0Q1Q3|RRMF_CLONN RecName: Full=Probable rRNA maturation factor
 gi|118134445|gb|ABK61489.1| conserved hypothetical protein [Clostridium novyi NT]
          Length = 166

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 32/169 (18%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIV----ELSLVFTDSHRIETLNFE 73
           ++ +  DE  L TL E++            Y +KE  V    E+S++  D+  I+ +N E
Sbjct: 8   QDKIKIDEKTLNTLDEII-----------KYALKEEEVYVNTEVSVILIDNDTIKEINKE 56

Query: 74  YRGIDKPTNVLSFPT----------------AF-ASSDGCSSLMLGDIVLAYEIIEIEAN 116
            R IDK T+VLSFP                  F AS      L+LGDIVL+ E  E ++ 
Sbjct: 57  TRDIDKVTDVLSFPMLDYPKGKTYKEVYKDYEFDASYLDEGELVLGDIVLSLERAEEQSK 116

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G  F   + +L IH  LHLLGYDH++D +  +M   E  IL    I 
Sbjct: 117 EFGHSFLREVCYLTIHSVLHLLGYDHMEDDEKAIMRKREEEILNKFSIK 165


>gi|304438430|ref|ZP_07398370.1| metal-dependent hydrolase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368513|gb|EFM22198.1| metal-dependent hydrolase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 153

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEII 111
           E+S+  TD   I  LN +YR +D+PT+VLSF    +      D    ++LGD+V++ E +
Sbjct: 39  EVSVTLTDDAHIHVLNRDYRSVDRPTDVLSFALTESEEPAILDAPYGVVLGDLVISLERV 98

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +A   G      L  L +HG LHLLGYDH++++D   ME  +R +++ LGI
Sbjct: 99  AAQAEEYGHSVLRELSFLTVHGMLHLLGYDHIEEEDRVEMEEEQRHVMDVLGI 151


>gi|299144158|ref|ZP_07037238.1| putative metalloprotease [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518643|gb|EFI42382.1| putative metalloprotease [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 148

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 3/119 (2%)

Query: 46  KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIV 105
           K   + ENI+ +S+ F D   I+ LN  +RG+D  T+VLSFP            +LGD+V
Sbjct: 31  KSEKLDENIM-VSVSFVDDEEIQELNKNFRGVDSSTDVLSFP--IDDEFQIEERILGDVV 87

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +  + +  +A       E  + +L +H  LHLLGYDH++++D  +M   E+ I+++L I
Sbjct: 88  INTKRVIEQAQEFRHSNEREMSYLTVHSVLHLLGYDHIEEEDRLIMRSKEKIIMDNLKI 146


>gi|295424888|ref|ZP_06817603.1| metal-dependent hydrolase [Lactobacillus amylolyticus DSM 11664]
 gi|295065454|gb|EFG56347.1| metal-dependent hydrolase [Lactobacillus amylolyticus DSM 11664]
          Length = 185

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 11/132 (8%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------TAFAS 92
           L++K    K+N +E+S+ F +  R   +N +YR  D+PT+V+SF            AFA 
Sbjct: 42  LLTKTKIGKKNNLEMSINFVNEDRSHEINLKYRDKDRPTDVISFAIEDGEDDLDMAAFAD 101

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
            D      +GD+ +   +I+  +   G  F+    + ++HGFLHL GYDH+  ++A  M 
Sbjct: 102 -DPDFQEDIGDLFMCPSVIKRHSVEYGTGFDREFGYTVVHGFLHLNGYDHIKPEEAKEMF 160

Query: 153 GLERSILEDLGI 164
           G++  +LE+ G+
Sbjct: 161 GIQGKVLEEYGL 172


>gi|126736950|ref|ZP_01752685.1| hypothetical protein RSK20926_10984 [Roseobacter sp. SK209-2-6]
 gi|126721535|gb|EBA18238.1| hypothetical protein RSK20926_10984 [Roseobacter sp. SK209-2-6]
          Length = 169

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 72/128 (56%), Gaps = 12/128 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLM----------LGD 103
           E++L+     +I  LN E+RG    TNVLS+P     A   G   L           LGD
Sbjct: 39  EVALLACGDEKIAELNSEFRGKPVATNVLSWPAEDLAAEEPGGQPLQPEPDFTGEIPLGD 98

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           I +A++    EA    K   +HL HL++HG LHLLGYDH+ D DA VME LE  IL  +G
Sbjct: 99  IAIAFDTCLREAKAAQKPLADHLRHLLVHGVLHLLGYDHIRDPDATVMEALEVEILGKMG 158

Query: 164 INDPYEVD 171
           I+DPYE+D
Sbjct: 159 IDDPYEID 166


>gi|188588423|ref|YP_001920266.1| putative metalloprotease [Clostridium botulinum E3 str. Alaska E43]
 gi|238689660|sp|B2V2J8|RRMF_CLOBA RecName: Full=Probable rRNA maturation factor
 gi|188498704|gb|ACD51840.1| conserved hypothetical protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 166

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 17/126 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------------TAFASSD-GCSS 98
           E+SL+F D+  I  +N E R ID+ T+VLSFP                  F+ +D     
Sbjct: 39  EISLLFVDNEEIREINNETRNIDRATDVLSFPMLDYPEKKVFKEVYTENDFSEADFDGDD 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIVL+ E    ++      +E    +L++H  LHLLGYDH+++ D   M   E  I
Sbjct: 99  LVLGDIVLSLERALEQSKEYNHSYEREASYLVVHSVLHLLGYDHMEEDDKVKMRKREEEI 158

Query: 159 LEDLGI 164
           L  L I
Sbjct: 159 LTALDI 164


>gi|187933939|ref|YP_001885105.1| metalloprotease [Clostridium botulinum B str. Eklund 17B]
 gi|238691633|sp|B2TM06|RRMF_CLOBB RecName: Full=Probable rRNA maturation factor
 gi|187722092|gb|ACD23313.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 166

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 17/126 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------------TAFASSD-GCSS 98
           E+SL+F D+  I  +N E R ID+ T+VLSFP                  F+ +D     
Sbjct: 39  EISLLFVDNEEIREINNETRNIDRATDVLSFPMLDYPEKKVFKEVYTENDFSEADFDGDD 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGD+VL+ E    ++      +E    +L++H  LHLLGYDH++++D   M   E  I
Sbjct: 99  LVLGDVVLSLERALEQSKEYNHSYEREASYLVVHSVLHLLGYDHMEEEDKVKMRKREEEI 158

Query: 159 LEDLGI 164
           L  L I
Sbjct: 159 LTALDI 164


>gi|73662495|ref|YP_301276.1| hypothetical protein SSP1186 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123642702|sp|Q49Y13|RRMF_STAS1 RecName: Full=Probable rRNA maturation factor
 gi|72495010|dbj|BAE18331.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 153

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 3/112 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIEI 113
           LS+ F D   I+ +N  YR  DK T+V+SF       +     M   LGDI++  ++ + 
Sbjct: 40  LSVTFVDKDEIQEINKMYRDKDKVTDVISFALEEDEPEITGIEMPRVLGDIIICTDVAQE 99

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A+  G  FE  L  L +HGFLHLLGYDH++++D   M G +  IL   G+ 
Sbjct: 100 QADSYGHSFERELGFLALHGFLHLLGYDHMNEQDEKQMFGRQDQILNAYGLT 151


>gi|57233865|ref|YP_182081.1| hypothetical protein DET1370 [Dehalococcoides ethenogenes 195]
 gi|123618332|sp|Q3Z6R8|RRMF_DEHE1 RecName: Full=Probable rRNA maturation factor
 gi|57224313|gb|AAW39370.1| conserved hypothetical protein TIGR00043 [Dehalococcoides
           ethenogenes 195]
          Length = 172

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 12/137 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF- 86
            + L    F K +++   K      N  EL +V T    I+ LN +YRG+D+PT+VLSF 
Sbjct: 23  FKKLVSTPFLKKIASKTLKAQAADPN-SELGIVITGQEEIKDLNLKYRGLDEPTDVLSFY 81

Query: 87  -----PTAFASSDGCSS-----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
                P    ++D   +     + LG+++++Y   E++A        + +  L+IHG LH
Sbjct: 82  MLEENPENLTAADDFPTPPDENIHLGEVIISYPQAELQATAASHSVSHEIAFLLIHGVLH 141

Query: 137 LLGYDHVDDKDACVMEG 153
           LLGYDH +     VM+ 
Sbjct: 142 LLGYDHHEVVAEAVMKS 158


>gi|317122974|ref|YP_004102977.1| hypothetical protein Tmar_2170 [Thermaerobacter marianensis DSM
           12885]
 gi|315592954|gb|ADU52250.1| protein of unknown function UPF0054 [Thermaerobacter marianensis
           DSM 12885]
          Length = 173

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 11/108 (10%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----------AFASSDGCSSLMLGD 103
           VE+SL F D   I  LN  YRG D PT+VLSFP               +  G   L LGD
Sbjct: 50  VEVSLTFVDDAAIHELNRRYRGKDAPTDVLSFPQLEQEEIAALRDPVPAVLGPDLLPLGD 109

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           +V++ E    +A   G   +  + +L+ HG LHLLGYDH D +   +M
Sbjct: 110 VVISLERAAAQAREYGHSLDREVGYLLAHGVLHLLGYDHPDAEGERLM 157


>gi|138896065|ref|YP_001126518.1| putative metalloprotease [Geobacillus thermodenitrificans NG80-2]
 gi|196248958|ref|ZP_03147658.1| protein of unknown function UPF0054 [Geobacillus sp. G11MC16]
 gi|166228371|sp|A4IR19|RRMF_GEOTN RecName: Full=Probable rRNA maturation factor
 gi|134267578|gb|ABO67773.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211834|gb|EDY06593.1| protein of unknown function UPF0054 [Geobacillus sp. G11MC16]
          Length = 156

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAY 108
            E+S+ F D+ RI  +N +YRG D PT+VLSF            +      +LGDI+++ 
Sbjct: 39  AEVSVSFVDNERIRVMNRDYRGKDAPTDVLSFALEEEGEGEIDIIGADVPPVLGDIIISI 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              + +A   G  F   L  L +HGFLHLLGYDH  +++  VM   +  IL   G+ 
Sbjct: 99  PKAKEQAAEYGHSFMRELGFLAVHGFLHLLGYDHETEEEERVMFAKQEEILTRFGLT 155


>gi|261364225|ref|ZP_05977108.1| putative metalloprotease [Neisseria mucosa ATCC 25996]
 gi|288567840|gb|EFC89400.1| putative metalloprotease [Neisseria mucosa ATCC 25996]
          Length = 171

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         D  S  + GD+++  +++ 
Sbjct: 51  TDISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQVSDDLCGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL +HG LHL+GYDH+++ +A  ME LE  +++  G  +PY+ D
Sbjct: 111 KEAAEQGKTAEQHFAHLTMHGTLHLMGYDHIEEAEAEEMEALEIRLMQAAGYPNPYQED 169


>gi|160892625|ref|ZP_02073415.1| hypothetical protein CLOL250_00155 [Clostridium sp. L2-50]
 gi|156865666|gb|EDO59097.1| hypothetical protein CLOL250_00155 [Clostridium sp. L2-50]
          Length = 170

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 16/130 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDG---------CSSL 99
           E+ ++ TD+  I+T+N   R ID PT+VLSFP         F+  DG            L
Sbjct: 39  EIYVLLTDNSGIQTINNCQRNIDAPTDVLSFPLIDYKEPGDFSVVDGDTCDYFNPESGEL 98

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           MLGDI+++ + +  +A          L  L+ H  LHL GYDH+D+++   ME L+  IL
Sbjct: 99  MLGDIIISMDRVYEQAKSYNHSNTRELAFLVAHSMLHLFGYDHIDEEERKQMEDLQEQIL 158

Query: 160 EDLGINDPYE 169
            + G    YE
Sbjct: 159 NEKGYTRDYE 168


>gi|228906475|ref|YP_932284.2| unkown domain/metalloprotease fusion protein [Azoarcus sp. BH72]
          Length = 271

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 6/105 (5%)

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFE 123
             LN  YRG D  TNVL+F   +    G  ++    ++GD+VL   ++  EA   GK  +
Sbjct: 168 RALNLGYRGKDYATNVLTF--VYGEEGGAPAVEGMPLMGDLVLCVPVVVREAAEQGKALD 225

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H  HL++HG LHL G DH DD +A  ME  E +IL  LG  +PY
Sbjct: 226 AHFAHLVVHGMLHLQGLDHEDDAEAEAMETAETNILRGLGYANPY 270


>gi|255066351|ref|ZP_05318206.1| putative metalloprotease [Neisseria sicca ATCC 29256]
 gi|255049561|gb|EET45025.1| putative metalloprotease [Neisseria sicca ATCC 29256]
          Length = 171

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            ++SL+  D       N +YRG D  TNVLSF         D  S  + GD+++  +++ 
Sbjct: 51  ADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQFSDELCGDLIICPQVVL 110

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            EA   GK  E H  HL +HG LHL+GYDH+++ +A  ME LE  +++  G  +PY+ D
Sbjct: 111 KEAAEQGKTAEQHFAHLTMHGTLHLMGYDHIEETEAEEMEALEIRLMQAAGYPNPYQED 169


>gi|261211995|ref|ZP_05926281.1| predicted metal-dependent hydrolase [Vibrio sp. RC341]
 gi|260838603|gb|EEX65254.1| predicted metal-dependent hydrolase [Vibrio sp. RC341]
          Length = 78

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 48/69 (69%)

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGD+V+  +++E EA    K  + H  H+++HG LHLLGYDH++D +A  ME LE  I+
Sbjct: 5   LLGDLVICRQVVEHEAIEQNKPLQAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIM 64

Query: 160 EDLGINDPY 168
           +++G  DPY
Sbjct: 65  QEMGFTDPY 73


>gi|319778546|ref|YP_004129459.1| metal-dependent hydrolase [Taylorella equigenitalis MCE9]
 gi|317108570|gb|ADU91316.1| metal-dependent hydrolase [Taylorella equigenitalis MCE9]
          Length = 162

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAY 108
           FV+ +  EL+L F        LN  YR  +   N+L+F     + D    ++  DI++  
Sbjct: 46  FVEFDSAELNLRFVGPEEARNLNSVYRKKEYVPNILTFDYGVDALD----VLRADIIICK 101

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +I+  EA   GK  + H  HL++HG LH  G+DH+D++ A  ME LE  I++  G   PY
Sbjct: 102 DILLKEALDQGKSIKQHACHLVVHGVLHACGFDHMDEESAIEMESLEAEIVQSFGFPHPY 161


>gi|172056859|ref|YP_001813319.1| hypothetical protein Exig_0822 [Exiguobacterium sibiricum 255-15]
 gi|229890252|sp|B1YL70|RRMF_EXIS2 RecName: Full=Probable rRNA maturation factor
 gi|171989380|gb|ACB60302.1| protein of unknown function UPF0054 [Exiguobacterium sibiricum
           255-15]
          Length = 158

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 7/111 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-------SSLMLGDIVLAY 108
           ELS+ F  +  I+ +N E+RG D+ T+V+SF       D           ++LGD++++ 
Sbjct: 38  ELSVTFVTNDEIQQINREWRGKDQATDVISFAMDELGEDEIDFELLEDEPVVLGDLIISV 97

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           E    +A   G  FE  L  L +HGFLHLLGYDH++  D  +M   +  IL
Sbjct: 98  ERCREQAAEYGNHFERELGFLAVHGFLHLLGYDHIEKADEDIMTKRQEEIL 148


>gi|238854660|ref|ZP_04644990.1| putative metalloprotease [Lactobacillus jensenii 269-3]
 gi|260664397|ref|ZP_05865249.1| metal-dependent hydrolase [Lactobacillus jensenii SJ-7A-US]
 gi|282932949|ref|ZP_06338346.1| putative metalloprotease [Lactobacillus jensenii 208-1]
 gi|313472199|ref|ZP_07812691.1| putative metalloprotease [Lactobacillus jensenii 1153]
 gi|238832450|gb|EEQ24757.1| putative metalloprotease [Lactobacillus jensenii 269-3]
 gi|239529579|gb|EEQ68580.1| putative metalloprotease [Lactobacillus jensenii 1153]
 gi|260561462|gb|EEX27434.1| metal-dependent hydrolase [Lactobacillus jensenii SJ-7A-US]
 gi|281302984|gb|EFA95189.1| putative metalloprotease [Lactobacillus jensenii 208-1]
          Length = 174

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FAS--S 93
           L++K    KEN +E+S+ F D  +   +N +YR  D+PT+V+SF           AS  S
Sbjct: 31  LMAKKEIGKENNLEMSINFVDEDKSHQINRDYRDKDRPTDVISFAIEDGEEGVDLASFIS 90

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           D   +  +GD+ +   +I+  A      F+    + ++HGFLHL GYDH++  +A  M G
Sbjct: 91  DPDFTEDIGDLFMCISVIKRHAEEYETGFDREFGYTLVHGFLHLNGYDHIEPAEAKEMFG 150

Query: 154 LERSILEDLGI 164
           ++  +LE+ G+
Sbjct: 151 IQGKVLEEYGL 161


>gi|33866843|ref|NP_898402.1| hypothetical protein SYNW2313 [Synechococcus sp. WH 8102]
 gi|46577382|sp|Q7U3W4|RRMF_SYNPX RecName: Full=Probable rRNA maturation factor
 gi|33639444|emb|CAE08828.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 185

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 13/150 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           ++T+C      A  +L       + + V L L FTD   I  LN  +R  ++ T+VLSF 
Sbjct: 35  IQTIC------ADPSLPCPALVCQADEVSLGLRFTDDATITALNSTWRQRNQATDVLSF- 87

Query: 88  TAFASSDG---CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
            A   + G    S + LGDIV++ +    +A+  G      L  L+ HG LHLLG+DH D
Sbjct: 88  AALEEAPGLPDVSCVELGDIVISLDTARRQASEHGHNLTRELRWLVSHGLLHLLGWDHPD 147

Query: 145 DKDACVMEGLERSILE---DLGINDPYEVD 171
           ++    M  L+  +L+   ++ I DP+ VD
Sbjct: 148 EESLVAMLQLQEQLLDGGSNVRIRDPHSVD 177


>gi|145558838|sp|A1K3J2|RRMF_AZOSB RecName: Full=Probable rRNA maturation factor
 gi|119669484|emb|CAL93397.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 252

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 6/105 (5%)

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFE 123
             LN  YRG D  TNVL+F   +    G  ++    ++GD+VL   ++  EA   GK  +
Sbjct: 149 RALNLGYRGKDYATNVLTF--VYGEEGGAPAVEGMPLMGDLVLCVPVVVREAAEQGKALD 206

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H  HL++HG LHL G DH DD +A  ME  E +IL  LG  +PY
Sbjct: 207 AHFAHLVVHGMLHLQGLDHEDDAEAEAMETAETNILRGLGYANPY 251


>gi|227498625|ref|ZP_03928769.1| cytidine deaminase [Acidaminococcus sp. D21]
 gi|226904081|gb|EEH89999.1| cytidine deaminase [Acidaminococcus sp. D21]
          Length = 160

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYE 109
            E+ +   D   I  LN  YRGID+PT+VLSF       +          +LGD++++  
Sbjct: 39  TEVDITLVDDAAIHELNRTYRGIDRPTDVLSFALDEGEEEPEVDDDEIEHLLGDVIISAP 98

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
               +    G   E  + +L +HG LHLLGYDH+++KD  +M   E  +L  L
Sbjct: 99  TAVRQGEEYGHGLEREMTYLAVHGMLHLLGYDHMEEKDKLIMRKREEEVLRRL 151


>gi|71083090|ref|YP_265809.1| hypothetical protein SAR11_0385 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|123647146|sp|Q4FNN3|RRMF_PELUB RecName: Full=Probable rRNA maturation factor
 gi|71062203|gb|AAZ21206.1| Conserved hypothetical protein [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 5/141 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E  LW  +I         F  ++     K Y      + L+++ +++  I+ L
Sbjct: 2   IKIDVVSECTLWSKKIKRNK----TFFNSILKFFPKKYKFIGKKINLTILLSNNKNIKKL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++R  +KPT+VLSFP      +   S  LGDIV++YE +    N+   EF+  +V + 
Sbjct: 58  NKDFRNKNKPTDVLSFPFE-KKFNPKKSNYLGDIVISYEFMNKPKNISILEFKQKVVKIF 116

Query: 131 IHGFLHLLGYDHVDDKDACVM 151
           IHGFLHLLG+DH+  KD   M
Sbjct: 117 IHGFLHLLGHDHIKLKDFKKM 137


>gi|91789935|ref|YP_550887.1| hypothetical protein Bpro_4096 [Polaromonas sp. JS666]
 gi|123164394|sp|Q124Q3|RRMF_POLSJ RecName: Full=Probable rRNA maturation factor
 gi|91699160|gb|ABE45989.1| protein of unknown function UPF0054 [Polaromonas sp. JS666]
          Length = 154

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D+   ++LN +YR  D  TNVL+F            ++  D+VL   ++E E
Sbjct: 46  AEITVRIVDAEEGQSLNRDYRRKDYATNVLTFDYTR------EPVVTADLVLCAPVVERE 99

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A   GK  E H  HL++H  LH  GYDH  +++DA  ME LE  +L  L   +PY
Sbjct: 100 AREQGKTLEAHYAHLLVHATLHAQGYDHETNERDALEMEALEILLLASLRFANPY 154


>gi|313892397|ref|ZP_07825989.1| translation metalloprotein YbeY [Dialister microaerophilus UPII
           345-E]
 gi|329121359|ref|ZP_08249985.1| putative metalloprotease [Dialister micraerophilus DSM 19965]
 gi|313119256|gb|EFR42456.1| translation metalloprotein YbeY [Dialister microaerophilus UPII
           345-E]
 gi|327469768|gb|EGF15234.1| putative metalloprotease [Dialister micraerophilus DSM 19965]
          Length = 169

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 9/116 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYE 109
            EL ++   + RI  LN +YRGID PT+VLSF    A ++G   +      LGDI+L  +
Sbjct: 38  AELGVLICGAERIHELNRDYRGIDAPTDVLSF----ALNEGEDYIPEEEKALGDIILNID 93

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             + +A++ G   E  + +L +HGFLH+LGYDH + ++   M   E  IL   G+ 
Sbjct: 94  RAKEQAHMYGHSEEREMAYLSVHGFLHILGYDHYEAEEKKEMRKAEEDILGACGLQ 149


>gi|20807452|ref|NP_622623.1| putative metalloprotease [Thermoanaerobacter tengcongensis MB4]
 gi|26006913|sp|Q8RB52|RRMF_THETN RecName: Full=Probable rRNA maturation factor
 gi|20515977|gb|AAM24227.1| predicted metal-dependent hydrolase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 158

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---------LGDIVLAYEII 111
           F D+  I  LN  YRGID  T+VLSFP                      +GDIV++ E  
Sbjct: 44  FVDNEEIRKLNKYYRGIDSSTDVLSFPLMEFEEIEEGEEDEKDAEEIYPIGDIVISLEKA 103

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + +A   G  FE  + +L +H  LHLLGYDH  +++  +M   E  ++E LG+ 
Sbjct: 104 KEQAEEYGHSFEREVAYLTVHSMLHLLGYDHETEEERKLMREKEEKVMERLGLR 157


>gi|255291932|dbj|BAH90420.1| hypothetical protein [uncultured bacterium]
          Length = 155

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 9/123 (7%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVL 106
           G  V+   + + +V  D  R   LN ++R  D  TNVL+F  + A       L+  D+VL
Sbjct: 39  GEQVQAAEITVRIVGDDEGR--QLNRDFRARDYATNVLTFDYSGAP------LVAADLVL 90

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGIN 165
              ++  EA   GK   +H  HL++HG LH  G++H   D+DA  ME  E ++L  LG+ 
Sbjct: 91  CAPVVAREAAEQGKPLADHYAHLLVHGALHAQGWEHETSDEDAEAMEAHESAVLTGLGLP 150

Query: 166 DPY 168
           DPY
Sbjct: 151 DPY 153


>gi|126656865|ref|ZP_01728043.1| hypothetical protein CY0110_01764 [Cyanothece sp. CCY0110]
 gi|126621703|gb|EAZ92412.1| hypothetical protein CY0110_01764 [Cyanothece sp. CCY0110]
          Length = 172

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           EL+L  T    I++LN +YR  ++PT+VL+F       P      +    L +GDIV++ 
Sbjct: 57  ELTLRLTGDQEIQSLNAQYRHKNQPTDVLAFATLEENFPKITNQPEFLEPLYIGDIVISI 116

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E  E +A   G      L  L  HGFLHLLG+DH D++    M   + ++L+ +G+
Sbjct: 117 ETAEKQAQKEGHTLNRELPWLASHGFLHLLGWDHPDEQSLQKMLQQQETLLKIIGL 172


>gi|169829170|ref|YP_001699328.1| hypothetical protein Bsph_3714 [Lysinibacillus sphaericus C3-41]
 gi|238688186|sp|B1HTJ4|RRMF_LYSSC RecName: Full=Probable rRNA maturation factor
 gi|168993658|gb|ACA41198.1| UPF0054 protein [Lysinibacillus sphaericus C3-41]
          Length = 157

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 6/116 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLMLGDIVLAY 108
            E+S+ F  +  I+ +N EYRG D+PT+V+SF          A +      +LGDI+++ 
Sbjct: 39  TEVSVTFVTNDTIQDINREYRGKDQPTDVISFALEELGEGEMAVTFEGMPRVLGDIIIST 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +  + +A      FE  L  L +HGFLHLLGYDH++ ++  VM   +  IL+  G+
Sbjct: 99  DRAKEQAEEYNHSFERELGFLAVHGFLHLLGYDHMEPEEEKVMFTKQDEILQTFGL 154


>gi|218439664|ref|YP_002377993.1| hypothetical protein PCC7424_2713 [Cyanothece sp. PCC 7424]
 gi|218172392|gb|ACK71125.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 7424]
          Length = 180

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 8/116 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           ELSL  TD   I+  N +YR  ++PT+VL+F       P     S     L LGDI+++ 
Sbjct: 62  ELSLRLTDDQEIQFYNAQYRHKNQPTDVLAFAALEVDVPNLINESFD-EPLYLGDIIISI 120

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +  + +A   G      L  L  HGFLHLLG+DH DD+    M   + ++L ++G+
Sbjct: 121 DTAKRQATEQGHSLTQELAWLAAHGFLHLLGWDHPDDESLSAMLAQQETLLNNIGL 176


>gi|23099408|ref|NP_692874.1| putative metalloprotease [Oceanobacillus iheyensis HTE831]
 gi|29428201|sp|Q8EPX8|RRMF_OCEIH RecName: Full=Probable rRNA maturation factor
 gi|22777637|dbj|BAC13909.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 154

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 6/116 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD------GCSSLMLGDIVLAY 108
            ELS+ F D+  I+ LN  YR  D PT+V+SF    ++ D          L+LGDIV++ 
Sbjct: 37  AELSVNFVDNKEIQVLNRNYRQKDTPTDVISFAMQESNEDEMEIIGADGPLVLGDIVISV 96

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +  + ++       E  L  L +HGFLHLLGYDH+ ++D   M   +  IL + G+
Sbjct: 97  DKAKEQSIEYDHSLERELGFLAVHGFLHLLGYDHMKEEDEKKMFSRQEEILGEFGV 152


>gi|323486952|ref|ZP_08092267.1| hypothetical protein HMPREF9474_04018 [Clostridium symbiosum
           WAL-14163]
 gi|323692000|ref|ZP_08106248.1| hypothetical protein HMPREF9475_01111 [Clostridium symbiosum
           WAL-14673]
 gi|323399724|gb|EGA92107.1| hypothetical protein HMPREF9474_04018 [Clostridium symbiosum
           WAL-14163]
 gi|323503923|gb|EGB19737.1| hypothetical protein HMPREF9475_01111 [Clostridium symbiosum
           WAL-14673]
          Length = 165

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 16/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSS--------- 98
            E++++ TD+  I  +N E+R ID PT+VLSFP       + F   +  S          
Sbjct: 38  AEVNVILTDNAEIRRINREFRQIDSPTDVLSFPMGDFDVPSDFERMEEQSEDYFNPETGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIV++ + +E +A   G      L  L+ H  LHL GYDH+++++   ME  +  I
Sbjct: 98  LLLGDIVISVDKVEEQAEKYGHSQTRELAFLVAHSMLHLCGYDHMEEQERIAMEKRQEEI 157

Query: 159 LEDLG 163
           L   G
Sbjct: 158 LSTGG 162


>gi|227544913|ref|ZP_03974962.1| metal-dependent hydrolase [Lactobacillus reuteri CF48-3A]
 gi|300910060|ref|ZP_07127520.1| probable metalloprotease [Lactobacillus reuteri SD2112]
 gi|227185125|gb|EEI65196.1| metal-dependent hydrolase [Lactobacillus reuteri CF48-3A]
 gi|300892708|gb|EFK86068.1| probable metalloprotease [Lactobacillus reuteri SD2112]
          Length = 160

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 12/121 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+SL F ++  I+ LN +YR +D+ T+VLSF  A  + D    +M           LGD
Sbjct: 39  TEMSLTFVNNPEIKKLNAQYRNVDRATDVLSF-AAEEAGDETPIIMDPQMAAEIPVNLGD 97

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + ++ + +  +A  LG   +  L  L +HGFLHL GYDH +  D   M  L+R IL+  G
Sbjct: 98  LFISIDKVAEQAKFLGHSVDRELGFLAVHGFLHLNGYDHEEPADEEKMFKLQREILDGYG 157

Query: 164 I 164
           +
Sbjct: 158 L 158


>gi|255280944|ref|ZP_05345499.1| putative metalloprotease [Bryantella formatexigens DSM 14469]
 gi|255268392|gb|EET61597.1| putative metalloprotease [Bryantella formatexigens DSM 14469]
          Length = 167

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 16/127 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E+S+  TD   I T+N E RGID  T+VLSFP       G                   
Sbjct: 38  AEVSVTLTDDAEIRTINREQRGIDAATDVLSFPMVSYEIPGNFDFLEEEPADCFHPDSGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           LMLGDIV++ + +  +A   G         L+ H   HL+GYDH+ +++A  ME  +  +
Sbjct: 98  LMLGDIVISVDHVYAQAEQYGHSLLREYAFLLAHSMFHLIGYDHMTEQEAAEMERKQEEV 157

Query: 159 LEDLGIN 165
           LE L I 
Sbjct: 158 LERLNIT 164


>gi|241889939|ref|ZP_04777237.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
 gi|241863561|gb|EER67945.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
          Length = 157

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 7/118 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-------GDIVL 106
           I E+SL F     I+ +N +YRG D PT+V+SF       D    + L       GD+++
Sbjct: 38  ITEMSLSFVSKEEIQEINRDYRGKDVPTDVISFALNDEVEDEIDIIGLEDEINSIGDVII 97

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +I   +A      F+  +  L +HGFLHLLGYDH+ ++D   M G +  ILE  G+
Sbjct: 98  CVDIAHEQAKEYEHSFDREIGFLAVHGFLHLLGYDHMTEEDEKEMFGKQDEILEKFGL 155


>gi|227364880|ref|ZP_03848926.1| metal-dependent hydrolase [Lactobacillus reuteri MM2-3]
 gi|325682495|ref|ZP_08162012.1| putative metalloprotease [Lactobacillus reuteri MM4-1A]
 gi|227070084|gb|EEI08461.1| metal-dependent hydrolase [Lactobacillus reuteri MM2-3]
 gi|324978334|gb|EGC15284.1| putative metalloprotease [Lactobacillus reuteri MM4-1A]
          Length = 160

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 12/121 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+SL F ++  I+ LN +YR +D+ T+VLSF  A  + D    +M           LGD
Sbjct: 39  TEMSLTFVNNPEIKKLNAQYRNVDRATDVLSF-AAEEAGDETPIIMDPEMAAEIPVNLGD 97

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + ++ + +  +A  LG   +  L  L +HGFLHL GYDH +  D   M  L+R IL+  G
Sbjct: 98  LFISIDKVAEQAKFLGHSVDRELGFLAVHGFLHLNGYDHEEPADEEKMFKLQREILDGYG 157

Query: 164 I 164
           +
Sbjct: 158 L 158


>gi|108800421|ref|YP_640618.1| putative metalloprotease [Mycobacterium sp. MCS]
 gi|119869550|ref|YP_939502.1| putative metalloprotease [Mycobacterium sp. KMS]
 gi|126436044|ref|YP_001071735.1| putative metalloprotease [Mycobacterium sp. JLS]
 gi|122976747|sp|Q1B6C2|RRMF_MYCSS RecName: Full=Probable rRNA maturation factor
 gi|145558813|sp|A1UIQ4|RRMF_MYCSK RecName: Full=Probable rRNA maturation factor
 gi|166232596|sp|A3Q267|RRMF_MYCSJ RecName: Full=Probable rRNA maturation factor
 gi|108770840|gb|ABG09562.1| protein of unknown function UPF0054 [Mycobacterium sp. MCS]
 gi|119695639|gb|ABL92712.1| protein of unknown function UPF0054 [Mycobacterium sp. KMS]
 gi|126235844|gb|ABN99244.1| protein of unknown function UPF0054 [Mycobacterium sp. JLS]
          Length = 177

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 11/131 (8%)

Query: 42  NLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG- 95
            LIS   FV E +      ELS+V  D+  +  L+  +  +  PT+V+SFP       G 
Sbjct: 17  ELISVARFVIEKMNVNPAAELSMVLLDTSSMADLHMRWMDLPGPTDVMSFPMDELEPGGR 76

Query: 96  -----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                    MLGDIVL  E    +A   G    + L  L +HG LHLLGYDH +  +   
Sbjct: 77  PDAPEPGPAMLGDIVLCPEFAAKQAETAGHSLGHELALLTVHGVLHLLGYDHAEPDEEKE 136

Query: 151 MEGLERSILED 161
           M  L+R +LE+
Sbjct: 137 MFALQRELLEE 147


>gi|126652812|ref|ZP_01724957.1| hypothetical protein BB14905_09040 [Bacillus sp. B14905]
 gi|126590348|gb|EAZ84468.1| hypothetical protein BB14905_09040 [Bacillus sp. B14905]
          Length = 157

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 11/123 (8%)

Query: 52  ENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLML 101
           ENI    E+S+ F  +  I+ +N EYRG D+PT+V+SF            + +G   + L
Sbjct: 33  ENIEPETEVSVTFVTNDTIQDINREYRGKDQPTDVISFALEELGEGEMTVTFEGMPRI-L 91

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI+++ +  + +A      FE  L  L +HGFLHLLGYDH++ ++  VM   +  IL+ 
Sbjct: 92  GDIIISTDRAKEQAEEYNHSFERELGFLAVHGFLHLLGYDHMEPEEEKVMFTKQDEILQT 151

Query: 162 LGI 164
            G+
Sbjct: 152 FGL 154


>gi|148543967|ref|YP_001271337.1| hypothetical protein Lreu_0736 [Lactobacillus reuteri DSM 20016]
 gi|184153362|ref|YP_001841703.1| hypothetical protein LAR_0707 [Lactobacillus reuteri JCM 1112]
 gi|194467790|ref|ZP_03073776.1| protein of unknown function UPF0054 [Lactobacillus reuteri 100-23]
 gi|167016785|sp|A5VJH6|RRMF_LACRD RecName: Full=Probable rRNA maturation factor
 gi|229890246|sp|B2G6Z1|RRMF_LACRJ RecName: Full=Probable rRNA maturation factor
 gi|148531001|gb|ABQ83000.1| protein of unknown function UPF0054 [Lactobacillus reuteri DSM
           20016]
 gi|183224706|dbj|BAG25223.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
 gi|194452643|gb|EDX41541.1| protein of unknown function UPF0054 [Lactobacillus reuteri 100-23]
          Length = 159

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 12/121 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+SL F ++  I+ LN +YR +D+ T+VLSF  A  + D    +M           LGD
Sbjct: 38  TEMSLTFVNNPEIKKLNAQYRNVDRATDVLSF-AAEEAGDETPIIMDPEMAAEIPVNLGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + ++ + +  +A  LG   +  L  L +HGFLHL GYDH +  D   M  L+R IL+  G
Sbjct: 97  LFISIDKVAEQAKFLGHSVDRELGFLAVHGFLHLNGYDHEEPADEEKMFKLQREILDGYG 156

Query: 164 I 164
           +
Sbjct: 157 L 157


>gi|73540218|ref|YP_294738.1| putative metalloprotease [Ralstonia eutropha JMP134]
 gi|72117631|gb|AAZ59894.1| Protein of unknown function UPF0054 [Ralstonia eutropha JMP134]
          Length = 255

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 4/115 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L++ F D      LN  YRG D  TNVL+F  A+A S+     + GDIVL   ++E EA 
Sbjct: 139 LTVRFVDEEEGRALNRSYRGKDYATNVLTF--AYAESE--DDPVTGDIVLCCPVVETEAR 194

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              K  E H  HLI+HG LH  GY+H DD +A  ME +E   L+ LG  DPY  D
Sbjct: 195 EQRKPLEAHYAHLIVHGVLHAQGYEHEDDAEAEEMEAIETETLQALGFEDPYRDD 249


>gi|326803484|ref|YP_004321302.1| translation metalloprotein YbeY [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651189|gb|AEA01372.1| translation metalloprotein YbeY [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 158

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 10/119 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---------LGDIV 105
            E+S        I  +N +YRG D+PT+V+SF      S+G S +          LGD++
Sbjct: 38  TEMSATIVHDDEIHAINRDYRGKDRPTDVISFAIN-DESEGDSPITEWPEDLPYELGDLI 96

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++ +  + +A       E  L  L  HGFLHL GYDH++ +D  VM GL+R IL+  G+
Sbjct: 97  ISLDTAKRQAEEYNHSLERELGFLACHGFLHLNGYDHIEPEDEKVMFGLQREILDAYGL 155


>gi|319651597|ref|ZP_08005724.1| hypothetical protein HMPREF1013_02336 [Bacillus sp. 2_A_57_CT2]
 gi|317396664|gb|EFV77375.1| hypothetical protein HMPREF1013_02336 [Bacillus sp. 2_A_57_CT2]
          Length = 156

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 6/115 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAYE 109
           E+S+ F  + RI  +N EYR  D+PT+V+SF            +      +LGDI+++  
Sbjct: 40  EVSITFVTNERIREINREYRDKDRPTDVISFAMEELGEGEIELIGADMPRVLGDIIISVA 99

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             + +A   G  F   L  L +HGFLHLLGYDH + +D   M   ++ IL++ G+
Sbjct: 100 KAKEQAEEYGHSFIRELGFLAVHGFLHLLGYDHENPEDEKKMFSRQKDILDEFGL 154


>gi|302869293|ref|YP_003837930.1| hypothetical protein Micau_4845 [Micromonospora aurantiaca ATCC
           27029]
 gi|315504232|ref|YP_004083119.1| hypothetical protein ML5_3454 [Micromonospora sp. L5]
 gi|302572152|gb|ADL48354.1| protein of unknown function UPF0054 [Micromonospora aurantiaca ATCC
           27029]
 gi|315410851|gb|ADU08968.1| protein of unknown function UPF0054 [Micromonospora sp. L5]
          Length = 157

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDI 104
           + ELS++  D   +  LN  + G D PT+VL+FP    S D         G    +LGDI
Sbjct: 34  LAELSVLLVDIEYMSELNHRWMGGDGPTDVLAFPMDEGSVDHGPGESNPAGGEPALLGDI 93

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           VL  E+   +A V G    + L  L +HG LHLLGYDH + ++   M GL+  +L
Sbjct: 94  VLCPEVAAKQAAVAGHSAADELHLLTVHGVLHLLGYDHAEPEEEREMFGLQARLL 148


>gi|28211644|ref|NP_782588.1| putative metalloprotease [Clostridium tetani E88]
 gi|46577461|sp|Q892R9|RRMF_CLOTE RecName: Full=Probable rRNA maturation factor
 gi|28204086|gb|AAO36525.1| metal-binding protein [Clostridium tetani E88]
          Length = 167

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSS---------- 98
           E+S+++ D+  I+ +N + RGI+K T+VLSFP         F+ S    S          
Sbjct: 39  EISVIYVDNEIIKEINNDTRGINKETDVLSFPMLEYPKGRVFSESYREYSFGVEYLNEGN 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIVL+ E    ++      F   + +L++H  LHLLGYDH+D+++  +M   E  I
Sbjct: 99  LVLGDIVLSLEKALEQSKEYNHSFLREVCYLVVHSVLHLLGYDHIDEEEKVIMRKKEEEI 158

Query: 159 LEDLGIN 165
           LE   I+
Sbjct: 159 LESFNIS 165


>gi|83944997|ref|ZP_00957363.1| hypothetical protein OA2633_10219 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851779|gb|EAP89634.1| hypothetical protein OA2633_10219 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 158

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 6/110 (5%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++F+D   +  LN  +R  DK TNVLSFP      +G      GD++LAYE    EA   
Sbjct: 51  ILFSDDATVHELNRRFRDKDKSTNVLSFPAP--EREGYP----GDVILAYETCAKEAQAA 104

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
                +H  HL +HG LHL G+DH ++ +A  ME LE ++L  LGI DPY
Sbjct: 105 AISLIDHAAHLALHGVLHLNGFDHQEEDEAAAMEALETAVLTGLGIQDPY 154


>gi|159899181|ref|YP_001545428.1| hypothetical protein Haur_2662 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892220|gb|ABX05300.1| protein of unknown function UPF0054 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 174

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 24/154 (15%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--- 86
           +L E V A+ +++    G +      E+ +  T+   +  LN +YRG+D+PT+VLSF   
Sbjct: 20  SLLEQVVAQVLADEGQTGTW------EIGIRITNDQELHELNRQYRGVDRPTDVLSFGEY 73

Query: 87  ---------PTA------FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
                    P        F   +   +  LGD+ ++YE +  +A          L +L+ 
Sbjct: 74  EDDDDDFIVPDGVYDDDEFDDPEADEAAYLGDLAISYERVLAQAQEYAHSSRRELCYLVA 133

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HG LHLLGYDH  D++   M   E   L  LGI 
Sbjct: 134 HGTLHLLGYDHETDEEREDMRQREEKALSTLGIT 167


>gi|260662172|ref|ZP_05863068.1| metal-dependent hydrolase [Lactobacillus fermentum 28-3-CHN]
 gi|260553555|gb|EEX26447.1| metal-dependent hydrolase [Lactobacillus fermentum 28-3-CHN]
          Length = 157

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 18/145 (12%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L E V A+A   L      V E   E+SL F  +  I  LN +YRGID+ T+V+SF  A 
Sbjct: 20  LAEKVLAQAAERLD-----VPEQ-AEMSLTFVLNPEIRELNRDYRGIDRATDVISF--AI 71

Query: 91  ASSDGCSSLM----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
              D  ++L           LGD+V++ + +  +A  L    +  L +L++HGFLHL GY
Sbjct: 72  EDDDDLANLPAEIRAELPVELGDLVISIDKVTEQALFLNHSADRELGYLLVHGFLHLNGY 131

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH +  D   M  L+  IL+ LG++
Sbjct: 132 DHEEPADEEKMFTLQEEILDGLGLS 156


>gi|304403958|ref|ZP_07385620.1| protein of unknown function UPF0054 [Paenibacillus curdlanolyticus
           YK9]
 gi|304346936|gb|EFM12768.1| protein of unknown function UPF0054 [Paenibacillus curdlanolyticus
           YK9]
          Length = 165

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 14/123 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLML 101
           ++SL F D   I  LN ++R ID+PT+VLSF       D                 S ML
Sbjct: 41  DVSLTFVDDEEIHRLNRDFRHIDRPTDVLSFAMQEDGEDEPEIVFEVESEDEPDPFSGML 100

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI+++ E    ++   G   E  +  L +HGFLHL+GYDH D +    M   + ++L+ 
Sbjct: 101 GDIIISTERALAQSEEYGHSLEREIGFLFVHGFLHLIGYDHEDAEGEAEMTAKQEAVLQK 160

Query: 162 LGI 164
            G+
Sbjct: 161 AGL 163


>gi|241895553|ref|ZP_04782849.1| metal-dependent hydrolase [Weissella paramesenteroides ATCC 33313]
 gi|241871131|gb|EER74882.1| metal-dependent hydrolase [Weissella paramesenteroides ATCC 33313]
          Length = 160

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 20/147 (13%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +V     V N   K   + EN  E+S+ F ++  I+  N EYRG+DK T+V+SF    A 
Sbjct: 17  QVKLVNDVLNYAGKYLSLPEN-TEMSVTFVNNDEIQRYNREYRGLDKATDVISF----AI 71

Query: 93  SDGCSSLML--------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
            D    L L              GDI+++ + I  +A  L   +E  L  L++HGFLHL 
Sbjct: 72  EDDGDDLPLLIDDEMADDIAKNIGDIIVSVDKIGEQAEYLEHSYERELGFLVVHGFLHLN 131

Query: 139 GYDHV-DDKDACVMEGLERSILEDLGI 164
           GYDH+  + D  +M  L+R IL+  G+
Sbjct: 132 GYDHMRSEADEKIMFDLQREILDSYGL 158


>gi|145558832|sp|Q475N9|RRMF_CUPPJ RecName: Full=Probable rRNA maturation factor
          Length = 201

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 4/115 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L++ F D      LN  YRG D  TNVL+F  A+A S+     + GDIVL   ++E EA 
Sbjct: 85  LTVRFVDEEEGRALNRSYRGKDYATNVLTF--AYAESE--DDPVTGDIVLCCPVVETEAR 140

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              K  E H  HLI+HG LH  GY+H DD +A  ME +E   L+ LG  DPY  D
Sbjct: 141 EQRKPLEAHYAHLIVHGVLHAQGYEHEDDAEAEEMEAIETETLQALGFEDPYRDD 195


>gi|254519867|ref|ZP_05131923.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226913616|gb|EEH98817.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 166

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 23/129 (17%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------------------TAFASSDG 95
           ++SL+F D+  I  +N E R ID+ T+VLSFP                      F   D 
Sbjct: 39  QISLLFVDNEEIREINNETRNIDRATDVLSFPMLDFEDKKVFNEMYLNYDFDETFKDGD- 97

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
              L+LGD+VL+ E    ++   G  +E  + +L++H  LHLLGYDH+++ D   M   E
Sbjct: 98  --ELILGDMVLSLERALEQSEEYGHSYEREVSYLVVHSILHLLGYDHMEEDDKKRMRKRE 155

Query: 156 RSILEDLGI 164
             IL  L I
Sbjct: 156 EEILNKLQI 164


>gi|111018251|ref|YP_701223.1| putative metalloprotease [Rhodococcus jostii RHA1]
 gi|123145313|sp|Q0SHC1|RRMF_RHOSR RecName: Full=Probable rRNA maturation factor
 gi|110817781|gb|ABG93065.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 180

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 11/131 (8%)

Query: 42  NLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AF 90
            LIS   FV   +      ELS+V  DS  +  L+  +  +  PT+V+SFP         
Sbjct: 17  ELISVARFVIARMDVHPAAELSMVLVDSATMADLHMRWMDLPGPTDVMSFPMDELEPGGR 76

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
             S      MLGDIVL       +A+  G    + L  L +HG LHLLGYDH + ++   
Sbjct: 77  PDSPEPGPSMLGDIVLCPSFASDQADKAGHPLAHELALLTVHGVLHLLGYDHAEPEEEKE 136

Query: 151 MEGLERSILED 161
           M GL+  +LED
Sbjct: 137 MFGLQNQLLED 147


>gi|85057391|ref|YP_456307.1| metal-dependent hydrolase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123518441|sp|Q2NK15|RRMF_AYWBP RecName: Full=Probable rRNA maturation factor
 gi|84789496|gb|ABC65228.1| predicted metal-dependent hydrolase [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 146

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 2/129 (1%)

Query: 38  KAVSNLISKGYF-VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
           K   +L+ K +  +KE  + + L+F  + +I+ LN  YR  + PT+VLSF        G 
Sbjct: 14  KPFKSLLIKMFLPIKEKKI-MHLIFVTNEKIQELNSFYRQKNYPTDVLSFHNDLTFFAGL 72

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LGD+ +++   + +A       E  +  L +HGFLHL GY H  +++  +M  L+ 
Sbjct: 73  EDNSLGDVFISFPKAQEQAKTFKHSLEREIAFLAVHGFLHLKGYQHRTEEEFQIMLALQE 132

Query: 157 SILEDLGIN 165
            IL+ +G+N
Sbjct: 133 KILQKVGLN 141


>gi|223044370|ref|ZP_03614404.1| conserved hypothetical protein [Staphylococcus capitis SK14]
 gi|314933742|ref|ZP_07841107.1| putative metalloprotease [Staphylococcus caprae C87]
 gi|222442239|gb|EEE48350.1| conserved hypothetical protein [Staphylococcus capitis SK14]
 gi|313653892|gb|EFS17649.1| putative metalloprotease [Staphylococcus caprae C87]
          Length = 156

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 13/136 (9%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           + FAK   ++ S+         ELS+ F D   I+ +N  YR  DK T+V+SF       
Sbjct: 25  LTFAKKQEHIDSEA--------ELSVTFVDKDEIQNINKMYRDKDKVTDVISFALEEDEP 76

Query: 94  D-GCSSL----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +   + L    +LGDI++  ++   +A   G  FE  L  L +HGFLHLLGYDH+ D+D 
Sbjct: 77  EIDMNELDIPRVLGDIIICTDVAHEQAENYGHSFERELGFLALHGFLHLLGYDHMTDEDE 136

Query: 149 CVMEGLERSILEDLGI 164
             M G + +IL   G+
Sbjct: 137 KEMFGRQDAILNAYGL 152


>gi|295398010|ref|ZP_06808066.1| metal-dependent hydrolase [Aerococcus viridans ATCC 11563]
 gi|294973768|gb|EFG49539.1| metal-dependent hydrolase [Aerococcus viridans ATCC 11563]
          Length = 158

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL---- 99
            + GY      ++LSL   +   I  +N  YR ID+PT+V+SF       D  + +    
Sbjct: 27  FAAGYLKLTGEIDLSLTIVNDAEIHEINKTYRNIDRPTDVISFAIEDLGEDELAVMGLPE 86

Query: 100 ----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                LGD+ ++ +    +A   G  FE  L  L +HGFLHL GYDH+++ D   M GL+
Sbjct: 87  DMPRELGDLFISIDKAREQAADYGHSFERELGFLAVHGFLHLNGYDHMNEVDEKEMFGLQ 146

Query: 156 RSILEDLGI 164
           + IL+  G+
Sbjct: 147 KEILDAYGL 155


>gi|150390781|ref|YP_001320830.1| hypothetical protein Amet_3031 [Alkaliphilus metalliredigens QYMF]
 gi|172052485|sp|A6TSK3|RRMF_ALKMQ RecName: Full=Probable rRNA maturation factor
 gi|149950643|gb|ABR49171.1| protein of unknown function UPF0054 [Alkaliphilus metalliredigens
           QYMF]
          Length = 155

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           E+SL F  +  I+ LN  YRG D  T+VLSFP     +DG       +LGD+V++ E   
Sbjct: 42  EVSLSFVSNKEIQNLNRTYRGKDYATDVLSFPLV-DDTDGFPMGEEKLLGDVVISVEKAV 100

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +A      FE  +  L++H   HL+GYDH+++ +A  M   E  +L ++G+
Sbjct: 101 EQAKEYQHSFEREMGFLMVHSLFHLMGYDHLEETEAQEMRKREEIVLTEMGL 152


>gi|90961874|ref|YP_535790.1| hypothetical protein LSL_0897 [Lactobacillus salivarius UCC118]
 gi|122449026|sp|Q1WTU0|RRMF_LACS1 RecName: Full=Probable rRNA maturation factor
 gi|90821068|gb|ABD99707.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118]
          Length = 159

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 11/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+S+   ++ +I  +N +YRG+DK T+V+SF       D    ++           +GD
Sbjct: 37  TEMSVTLMNNEQIHEINLKYRGVDKATDVISFAIEEDDPDELPIILPDDVDFEEPKNIGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           ++++ + ++ +A  LG   +  L  L +HGFLHL GYDH+  +D  VM  L+R IL+  G
Sbjct: 97  MMISMDKVKEQAEYLGHSEDRELGFLTVHGFLHLNGYDHMKAEDEKVMFKLQRDILDAYG 156

Query: 164 IN 165
           + 
Sbjct: 157 LK 158


>gi|296273646|ref|YP_003656277.1| hypothetical protein Arnit_2116 [Arcobacter nitrofigilis DSM 7299]
 gi|296097820|gb|ADG93770.1| protein of unknown function UPF0054 [Arcobacter nitrofigilis DSM
           7299]
          Length = 139

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 6/92 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           +EL LV+ D   I+TLN E+R IDK T+VLSFP  +       ++ LG IV++ + +E +
Sbjct: 29  IELILVYND--EIQTLNKEHRNIDKATDVLSFPLEY----DMPNMPLGSIVISVDFVEDK 82

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           A      F + L  L IHG LHLLGYDH  DK
Sbjct: 83  AKEYNHSFLDELTLLFIHGMLHLLGYDHEVDK 114


>gi|28378612|ref|NP_785504.1| hypothetical protein lp_1969 [Lactobacillus plantarum WCFS1]
 gi|254556827|ref|YP_003063244.1| hypothetical protein JDM1_1660 [Lactobacillus plantarum JDM1]
 gi|300768140|ref|ZP_07078045.1| metal-dependent hydrolase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180768|ref|YP_003924896.1| hypothetical protein LPST_C1586 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|38258751|sp|Q88VR8|RRMF_LACPL RecName: Full=Probable rRNA maturation factor
 gi|28271448|emb|CAD64353.1| unknown [Lactobacillus plantarum WCFS1]
 gi|254045754|gb|ACT62547.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
 gi|300494204|gb|EFK29367.1| metal-dependent hydrolase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046259|gb|ADN98802.1| hypothetical protein LPST_C1586 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 159

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 10/120 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC----------SSLMLGDI 104
            E+S+   ++  I+ +N +YRG+D+PT+V+SF       D              L LGDI
Sbjct: 38  TEVSVTLMNNDAIQKINEQYRGVDRPTDVISFAMHDDDEDDLIVMDPEMAAEMPLNLGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ + +  +A  L       L +L++HGFLHL GYDH+   D   M  L+R IL+  G+
Sbjct: 98  MISVDKVSEQAAFLNHSEARELGYLVVHGFLHLNGYDHLQPADETEMFTLQRQILDAYGL 157


>gi|301300991|ref|ZP_07207154.1| translation metalloprotein YbeY [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851407|gb|EFK79128.1| translation metalloprotein YbeY [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 159

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 11/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+S+   ++ +I  +N +YRG+DK T+V+SF       D    ++           +GD
Sbjct: 37  TEMSVTLMNNEQIHEINLKYRGVDKATDVISFAIEEDDPDELPIILPDYVDFEEPKNIGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           ++++ + ++ +A  LG   +  L  L +HGFLHL GYDH+  +D  VM  L+R IL+  G
Sbjct: 97  MMISMDKVKEQAEYLGHSEDRELGFLTVHGFLHLNGYDHMKAEDEKVMFKLQRDILDAYG 156

Query: 164 IN 165
           + 
Sbjct: 157 LK 158


>gi|291302084|ref|YP_003513362.1| hypothetical protein Snas_4626 [Stackebrandtia nassauensis DSM
           44728]
 gi|290571304|gb|ADD44269.1| protein of unknown function UPF0054 [Stackebrandtia nassauensis DSM
           44728]
          Length = 156

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 15/146 (10%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           G E+   ++C+V    A   L   G      + +LS++  D   +  LN  + G   PT+
Sbjct: 10  GAEVGTESICDV----ARHALSEMGVH---PLADLSILVVDETYMSELNHRWMGAAGPTD 62

Query: 83  VLSFPTAFAS--------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           VL+FP    S        S+  +  +LGD+VL  E+ E +A   G    + L  L +HG 
Sbjct: 63  VLAFPMDELSVGRGPSNDSEPAAETLLGDVVLCPEVAERQAAKAGHSTADELHMLTVHGV 122

Query: 135 LHLLGYDHVDDKDACVMEGLERSILE 160
           LH+LGYDH +  +A  M GL++S+L+
Sbjct: 123 LHILGYDHAEPDEAKQMFGLQQSLLD 148


>gi|237738285|ref|ZP_04568766.1| metal-binding protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420165|gb|EEO35212.1| metal-binding protein [Fusobacterium mortiferum ATCC 9817]
          Length = 155

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-DGCSS 98
           V  ++ K Y   E  V +SL+FT +  I+ +N EYR  D+PT+V+SF        D    
Sbjct: 27  VQKVLEKEY-ESEAPVYMSLLFTGNDEIQVINREYRDKDQPTDVISFAYHETEDFDIGPY 85

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDIV++ E +  +A       +  L +++ HG LHLLGYDH++++D   M   E  I
Sbjct: 86  DTLGDIVISLERVVEQAKEYNHSDKRELFYVLTHGILHLLGYDHIEEEDKKEMRAKEEEI 145

Query: 159 LEDLG 163
           L   G
Sbjct: 146 LGSFG 150


>gi|301064609|ref|ZP_07205005.1| translation metalloprotein YbeY [delta proteobacterium NaphS2]
 gi|300441357|gb|EFK05726.1| translation metalloprotein YbeY [delta proteobacterium NaphS2]
          Length = 128

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 5/92 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGC---SSLMLGDIVLAYEI 110
           ELS++FTD   +  LN +YR  +  T+VLSF    A    DG     ++MLGD+V++ + 
Sbjct: 16  ELSILFTDDENMAVLNRQYRQKEGATDVLSFSMQEALDGEDGTPLFETVMLGDVVISVDT 75

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
              +A  LG+ FE  +  L+IHG LHL GYDH
Sbjct: 76  ALRDAKELGESFEKTVDRLLIHGILHLTGYDH 107


>gi|262037729|ref|ZP_06011171.1| putative metalloprotease [Leptotrichia goodfellowii F0264]
 gi|261748201|gb|EEY35598.1| putative metalloprotease [Leptotrichia goodfellowii F0264]
          Length = 154

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 3/113 (2%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEI 110
           EN   LSL+  D+  I  +N EYR  D  T+V+SF  A+  ++    + +LGDI+++ E 
Sbjct: 40  ENDYYLSLLIADNKIIRKINKEYRNKDLETDVISF--AYNETENIGGMNVLGDIIISLER 97

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           ++ +A   G   E    +++ HG LHLLGYDH++++D  VM   E  IL+   
Sbjct: 98  VKSQAEDYGHSEEREFYYVLCHGMLHLLGYDHIEEEDKKVMREKEEKILKQFN 150


>gi|284990192|ref|YP_003408746.1| hypothetical protein Gobs_1659 [Geodermatophilus obscurus DSM
           43160]
 gi|284063437|gb|ADB74375.1| protein of unknown function UPF0054 [Geodermatophilus obscurus DSM
           43160]
          Length = 167

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 15/155 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +  DE  L  +C  V A+   N           + ELS++  D+  + TL
Sbjct: 1   MPVEVANESEIAVDESSLAAICTYVLAEMGVN----------PMAELSVLCVDADYMSTL 50

Query: 71  NFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           +  + G   PT+VL+FP     T           +LGD+VL   +   +A   G   ++ 
Sbjct: 51  HERWMGEKGPTDVLAFPMDELDTGRPDEPDPGPALLGDVVLCPSVAIRQARAAGHTMDDE 110

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           L+ L  HG LHLLGYDH++  +   M GL+  +L+
Sbjct: 111 LILLATHGVLHLLGYDHMEPDEEKEMFGLQSKLLD 145


>gi|325569846|ref|ZP_08145840.1| metal-dependent hydrolase [Enterococcus casseliflavus ATCC 12755]
 gi|325156969|gb|EGC69137.1| metal-dependent hydrolase [Enterococcus casseliflavus ATCC 12755]
          Length = 158

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLS----------FPTAFASSDGCSSLMLGDI 104
            E+S+ F D+  I+ +N EYRG D PT+V+S           P  F  +       LGDI
Sbjct: 37  TEMSVTFMDNAAIQEINREYRGKDMPTDVISFAFEEETAEEMPIIFDEALEEMPRDLGDI 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E  + +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+
Sbjct: 97  MISIERAKEQAAEYGHTYDRELGFLALHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGL 156

Query: 165 N 165
            
Sbjct: 157 K 157


>gi|167772060|ref|ZP_02444113.1| hypothetical protein ANACOL_03434 [Anaerotruncus colihominis DSM
           17241]
 gi|167665858|gb|EDS09988.1| hypothetical protein ANACOL_03434 [Anaerotruncus colihominis DSM
           17241]
          Length = 170

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 8/124 (6%)

Query: 49  FVKENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----FASSDGCSSLML 101
            V EN     E+S+ F ++ +I  LN EYR  D PT+VLSFP      +  +    +L L
Sbjct: 34  LVAENFHESAEISVSFVNNEQIRQLNAEYRQKDAPTDVLSFPLGSGGKYDRNMETGALQL 93

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILE 160
           GDIV++ E    +A + G   +  +  L +H  LHLLGYDH     +   M   E S+L 
Sbjct: 94  GDIVISVEKAVEQARMYGHSLQREIGFLTVHSMLHLLGYDHEAGGLEMVRMREKEESVLA 153

Query: 161 DLGI 164
            LG+
Sbjct: 154 SLGL 157


>gi|162447804|ref|YP_001620936.1| hypothetical protein ACL_0950 [Acholeplasma laidlawii PG-8A]
 gi|189040645|sp|A9NGT0|RRMF_ACHLI RecName: Full=Probable rRNA maturation factor
 gi|161985911|gb|ABX81560.1| conserved hypothetical protein [Acholeplasma laidlawii PG-8A]
          Length = 137

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 5/103 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + ++F D+ +I  +N  YR IDKPT+V+SFP      D      LGDI ++ +  +I+A 
Sbjct: 33  MQVIFVDNDQIRDINKMYRNIDKPTDVISFPNDDEKDDS-----LGDIFISIDQAKIQAL 87

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             G   E  +  L +HG+LHLLGYDH  + +   M  L+  IL
Sbjct: 88  DYGHTLEREIGFLAVHGYLHLLGYDHHTEAEEKEMFTLQEEIL 130


>gi|294501289|ref|YP_003564989.1| hypothetical protein BMQ_4551 [Bacillus megaterium QM B1551]
 gi|294351226|gb|ADE71555.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 156

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 7/122 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGD 103
           ++EN  E+S+ F D+ RI+ +N +YR  ++PT+V+SF       D    +      +LGD
Sbjct: 35  LQEN-AEVSVTFVDNDRIQEINHQYRHKNQPTDVISFALEEMGEDEMQIIGDELPRVLGD 93

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           IV++      +A      F   L  L +HGFLHLLGYDH   +D   M   ++ ILE  G
Sbjct: 94  IVISIPKAHEQAEEYNHSFMRELGFLTVHGFLHLLGYDHETSEDEKEMFTRQKDILEQYG 153

Query: 164 IN 165
           ++
Sbjct: 154 LS 155


>gi|168187766|ref|ZP_02622401.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169294380|gb|EDS76513.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 166

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 17/128 (13%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AF-ASSDGCS 97
            E+S+V  D++ I+ +N + R IDK T+VLSFP                  F AS     
Sbjct: 38  TEVSVVLIDNNTIKEINKQTRDIDKVTDVLSFPMLDYPKGETYKEVYKDYEFDASYLDEG 97

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
            L+LGDIVL+ E  E +    G  F   + +L IH  LHLLGYDH++D +  +M   E  
Sbjct: 98  ELVLGDIVLSLERAEEQRKEFGHSFLREVCYLTIHSVLHLLGYDHMEDDEKIIMRKREEE 157

Query: 158 ILEDLGIN 165
           IL    I 
Sbjct: 158 ILNKFSIK 165


>gi|320538438|ref|ZP_08038305.1| conserved hypothetical protein TIGR00043 [Treponema phagedenis
           F0421]
 gi|320144700|gb|EFW36449.1| conserved hypothetical protein TIGR00043 [Treponema phagedenis
           F0421]
          Length = 156

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 2/106 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLMLGDIVLAYEIIEI 113
           +LS+VF +   I TLN  YR ID PT+VLSF     + + DG + ++ GDI+++ + ++ 
Sbjct: 41  DLSVVFCNDEFIHTLNKTYRHIDSPTDVLSFENGEKYFNEDGEARILAGDIIISLDSVKA 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            A       +  L  L+IHG LHL G DH D+     M  L+  IL
Sbjct: 101 NAYAFHVSIDEELRRLLIHGVLHLFGMDHTDNSPEQEMLQLQEKIL 146


>gi|259046833|ref|ZP_05737234.1| metalloprotease [Granulicatella adiacens ATCC 49175]
 gi|259036456|gb|EEW37711.1| metalloprotease [Granulicatella adiacens ATCC 49175]
          Length = 169

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 11/121 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----------TAFASSDGCSSLMLGDI 104
           E S+ F  S RI  +N ++R IDK T+V+SF             +    D      +GDI
Sbjct: 45  ECSISFVSSERIREINRDFRNIDKVTDVISFALDDDDDDLASMQSIMEEDDSFVTSIGDI 104

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           V++ +  + +A   G   E  L  L +HGFLHL GYDH  +++   M GL++ ILE  G+
Sbjct: 105 VISLDRAKEQAEDYGHSLERELGFLALHGFLHLNGYDHQTEEEEAEMTGLQQEILEAYGL 164

Query: 165 N 165
            
Sbjct: 165 T 165


>gi|22299128|ref|NP_682375.1| putative metalloprotease [Thermosynechococcus elongatus BP-1]
 gi|29428189|sp|Q8DIK0|RRMF_THEEB RecName: Full=Probable rRNA maturation factor
 gi|22295310|dbj|BAC09137.1| tlr1585 [Thermosynechococcus elongatus BP-1]
          Length = 160

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 10/124 (8%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGD 103
            +  + EL+L  T    I+ LN +YR  D PT+VL    AFA+ DG   L       LGD
Sbjct: 37  TQGKVYELTLRLTTDAAIQALNQQYRDRDTPTDVL----AFATRDGALPLPLGEPEYLGD 92

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           I+++ +    +A   G      +  L  HG LHLLG+DH D+ +   M   +   LE +G
Sbjct: 93  IIISGDTARRQAAESGHTLSIEIAWLACHGLLHLLGWDHPDEAELARMLTQQAQCLEAVG 152

Query: 164 INDP 167
           +  P
Sbjct: 153 LTPP 156


>gi|81428486|ref|YP_395486.1| hypothetical protein LSA0876 [Lactobacillus sakei subsp. sakei 23K]
 gi|123564327|sp|Q38XA4|RRMF_LACSS RecName: Full=Probable rRNA maturation factor
 gi|78610128|emb|CAI55177.1| Hypothetical protein LCA_0876 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 158

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----PTAFASSDGCSSLM-----LGDI 104
            E+S+ F  + RI  +N EYR  D+ T+V+SF     P           L      +GD+
Sbjct: 37  TEMSVTFVTNERIRQINQEYRNTDRATDVISFAIEEDPEEEGLPANFEELFDIPKNIGDL 96

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            ++ E    +A   G  FE  L + ++HGFLHL GYDH+  +D   M  L+ +IL++ G+
Sbjct: 97  FVSLEKAAEQAETYGHSFERELGYTMVHGFLHLNGYDHIHTEDEVKMIPLQETILDEFGL 156

Query: 165 N 165
            
Sbjct: 157 K 157


>gi|302380695|ref|ZP_07269160.1| translation metalloprotein YbeY [Finegoldia magna ACS-171-V-Col3]
 gi|303233630|ref|ZP_07320284.1| translation metalloprotein YbeY [Finegoldia magna BVS033A4]
 gi|302311638|gb|EFK93654.1| translation metalloprotein YbeY [Finegoldia magna ACS-171-V-Col3]
 gi|302495064|gb|EFL54816.1| translation metalloprotein YbeY [Finegoldia magna BVS033A4]
          Length = 153

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 2/109 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+SL F     I  LN +YR  D  T+VLSFP          + +LGDI++  +    +A
Sbjct: 40  EISLSFVSEAEIRKLNRDYRDKDSVTDVLSFP--LDDDFAIQTNLLGDIIICCKRAIEQA 97

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
                  +  +V+L++H   HLLGYDH+D+ D  +M   E+  L+++GI
Sbjct: 98  KEYNHSIKREIVYLVVHSMFHLLGYDHIDESDRIIMRNKEKLALKEIGI 146


>gi|299535808|ref|ZP_07049129.1| hypothetical protein BFZC1_07283 [Lysinibacillus fusiformis ZC1]
 gi|298729008|gb|EFI69562.1| hypothetical protein BFZC1_07283 [Lysinibacillus fusiformis ZC1]
          Length = 157

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 52  ENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLG 102
           ENI    E+S+ F  +  I+ +N EYRG D+PT+V+SF            +      +LG
Sbjct: 33  ENIEPETEVSVTFVTNKAIQDINREYRGKDQPTDVISFALEELGQGEMEVIFEGMPRVLG 92

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI+++ +  + +A      FE  L  L +HGFLHLLGYDH+  ++  VM   +  IL+  
Sbjct: 93  DIIISTDRAKEQAEEYNHSFERELGFLAVHGFLHLLGYDHMKPEEEKVMFAKQDEILQTY 152

Query: 163 GI 164
           G+
Sbjct: 153 GL 154


>gi|331701378|ref|YP_004398337.1| metalloprotease ybeY [Lactobacillus buchneri NRRL B-30929]
 gi|329128721|gb|AEB73274.1| metalloprotease ybeY [Lactobacillus buchneri NRRL B-30929]
          Length = 161

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 12/123 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML------------G 102
            E+S+   ++  I  +N +YRG+D+ T+V+SF       D    +++            G
Sbjct: 38  TEMSMTLVNNDEIHQINKKYRGVDRATDVISFAIEDDDDDDDFPIVMDEELKESIPENIG 97

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI ++ + +  +A+ LG  FE  L  L +HGFLHL GYDH+   DA VM  L++ IL   
Sbjct: 98  DIFVSVDKVAEQADYLGHSFERELGFLCVHGFLHLNGYDHMKKADADVMFPLQKEILNAY 157

Query: 163 GIN 165
           G+ 
Sbjct: 158 GLK 160


>gi|295706636|ref|YP_003599711.1| hypothetical protein BMD_4537 [Bacillus megaterium DSM 319]
 gi|294804295|gb|ADF41361.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 156

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAY 108
            E+S+ F D+ RI+ +N +YR  ++PT+V+SF       D    +      +LGDIV++ 
Sbjct: 39  AEVSVTFVDNDRIQEINHQYRHKNQPTDVISFALEEMGEDEMQIIGDEMPRVLGDIVISI 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                +A      F   L  L +HGFLHLLGYDH   +D   M   ++ ILE  G++
Sbjct: 99  PKAHEQAEEYNHSFMRELGFLTVHGFLHLLGYDHETSEDEKEMFTRQKDILEQYGLS 155


>gi|229829053|ref|ZP_04455122.1| hypothetical protein GCWU000342_01138 [Shuttleworthia satelles DSM
           14600]
 gi|229792216|gb|EEP28330.1| hypothetical protein GCWU000342_01138 [Shuttleworthia satelles DSM
           14600]
          Length = 164

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 15/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---------------CSSL 99
            E+S+   D  R+  +N EYR ID+PT+VLSFP     + G                   
Sbjct: 38  AEVSVTLVDLDRMHQINREYRQIDRPTDVLSFPFIDYPAPGDFSEIEKTDDFFNPDSGEA 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDIVL    +  +A   G         LI H  LHL+GYDH+ D +   ME  +  +L
Sbjct: 98  VLGDIVLCIPRLVSQAQDYGHSTRREFAFLIAHSMLHLMGYDHMTDAERIDMERRQSEML 157

Query: 160 EDLGI 164
           + LGI
Sbjct: 158 DQLGI 162


>gi|158320283|ref|YP_001512790.1| hypothetical protein Clos_1248 [Alkaliphilus oremlandii OhILAs]
 gi|166977843|sp|A8MG66|RRMF_ALKOO RecName: Full=Probable rRNA maturation factor
 gi|158140482|gb|ABW18794.1| protein of unknown function UPF0054 [Alkaliphilus oremlandii
           OhILAs]
          Length = 151

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 6/132 (4%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            L E++     + LI +G+ +     E+SL F D+  I+ LN  YRG D  T+VLSFP  
Sbjct: 17  ALIELINKAVEACLIYEGWEID---YEVSLSFVDNQEIQALNHTYRGKDYATDVLSFPL- 72

Query: 90  FASSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
              + G      +LGDIV++ E    +A      FE  +  L++H   HL+GYDH  D+ 
Sbjct: 73  IEENQGLDLEEKLLGDIVISVEKAAEQAKEYNHSFEREMGFLVVHSMFHLMGYDHDHDEA 132

Query: 148 ACVMEGLERSIL 159
              M   E ++L
Sbjct: 133 TADMRKREEAVL 144


>gi|332296322|ref|YP_004438245.1| metalloprotease ybeY [Thermodesulfobium narugense DSM 14796]
 gi|332179425|gb|AEE15114.1| metalloprotease ybeY [Thermodesulfobium narugense DSM 14796]
          Length = 149

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 65/116 (56%), Gaps = 18/116 (15%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEII--- 111
           ELSL+ TD++ I  LN E+R  D PT+VLSF       +G  +L +LGDIV++ E     
Sbjct: 35  ELSLLLTDNNEIRILNKEFRKSDCPTDVLSF-------EGDMNLGVLGDIVISVERARED 87

Query: 112 -------EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
                  EI   V  K FE++L+ L+IHG LH LG+DH DD     M   ER  LE
Sbjct: 88  FVSGSYGEIIPEVAKKNFESYLLWLVIHGILHNLGFDHNDDVSERKMRSKERDCLE 143


>gi|67920493|ref|ZP_00514013.1| Protein of unknown function UPF0054 [Crocosphaera watsonii WH 8501]
 gi|67857977|gb|EAM53216.1| Protein of unknown function UPF0054 [Crocosphaera watsonii WH 8501]
          Length = 174

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           EL+L  T    I++LN +YR  ++PT+VL+F       P      D    L LGDI+++ 
Sbjct: 59  ELTLRLTGDKEIQSLNAQYRQKNQPTDVLAFATLEWDFPVVTPPEDLLEPLYLGDIIISV 118

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E    +A       +  L  L  HGFLHLLG+DH D+     M   + ++L  +G+
Sbjct: 119 ETARKQAQQQDHPLKRELPWLATHGFLHLLGWDHPDEPSLEEMLQQQETLLRLVGL 174


>gi|258645788|ref|ZP_05733257.1| putative metalloprotease [Dialister invisus DSM 15470]
 gi|260403159|gb|EEW96706.1| putative metalloprotease [Dialister invisus DSM 15470]
          Length = 164

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--TAFASSDGCSSLMLGDIVLA-YEII 111
            ELSL+  D+  I  LN  YRG+D PT+VLSF               +LGDI++  Y  +
Sbjct: 39  AELSLLICDADTIHELNKTYRGVDAPTDVLSFALNEGEEEDGMEEEKVLGDIIINLYRAV 98

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E +A   G   E  + +L +HGFLH+LGYDH D ++   M   E  IL   G+
Sbjct: 99  E-QAEEFGHSKEREMAYLSVHGFLHILGYDHYDPEEKRKMREKEEEILGACGM 150


>gi|308808316|ref|XP_003081468.1| Protein of unknown function UPF0054 (ISS) [Ostreococcus tauri]
 gi|116059931|emb|CAL55990.1| Protein of unknown function UPF0054 (ISS) [Ostreococcus tauri]
          Length = 122

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 43/65 (66%)

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
           A+E    EA   G  FE H+ HLI+HG LHLLGYDH+ D DA +ME LE  IL +LG+ +
Sbjct: 52  AWETCGREAAEQGIAFEQHVTHLIVHGVLHLLGYDHMRDADATLMERLEAEILGNLGLPN 111

Query: 167 PYEVD 171
           PY  D
Sbjct: 112 PYGED 116


>gi|114567084|ref|YP_754238.1| metal-dependent hydrolase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317921|sp|Q0AWN7|RRMF_SYNWW RecName: Full=Probable rRNA maturation factor
 gi|114338019|gb|ABI68867.1| metal-dependent hydrolase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 156

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 7/126 (5%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--- 96
           V+N ++K   +  N  ELS++  D+  I+ LN  YRG + PT+VLSF     S +     
Sbjct: 25  VANAVAKMVKLSPN-TELSVMIVDNSYIKELNLIYRGENNPTDVLSFAMNELSEEEMDLD 83

Query: 97  ---SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                 +LGDIV++ E    ++   G   E  L +LI HG LHLLGYDH ++++  +M  
Sbjct: 84  LPGEVNVLGDIVVSLEKAVSQSEEYGHSAERELGYLIAHGMLHLLGYDHENEEERNLMRN 143

Query: 154 LERSIL 159
           LE  I+
Sbjct: 144 LEERIM 149


>gi|197294661|ref|YP_001799202.1| hypothetical protein PAa_0617 [Candidatus Phytoplasma australiense]
 gi|226707789|sp|B1VAH8|RRMF_PHYAS RecName: Full=Probable rRNA maturation factor
 gi|171853988|emb|CAM11951.1| Conserved hypothetical protein [Candidatus Phytoplasma
           australiense]
          Length = 144

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           +KEN  ++ LVF    +I+ LN  +R  +  T+VLSFP  F+ +       LGD+ + +E
Sbjct: 27  IKEN-NQMHLVFVTKEKIKQLNTFFRKKNFVTDVLSFPNEFSFNPNLKDDSLGDVFICFE 85

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +++A  L    E  +  L++HGFLHL GY H ++++   M  L+  IL+ + +
Sbjct: 86  QAQLQAQKLLHSLEREIAFLVVHGFLHLKGYQHNNEEELEKMIHLQEKILKKINL 140


>gi|116670778|ref|YP_831711.1| putative metalloprotease [Arthrobacter sp. FB24]
 gi|145572771|sp|A0JX41|RRMF_ARTS2 RecName: Full=Probable rRNA maturation factor
 gi|116610887|gb|ABK03611.1| protein of unknown function UPF0054 [Arthrobacter sp. FB24]
          Length = 157

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 14/142 (9%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKP--TNVLSFP----TA 89
           + L++   FV E +      ELS++  D   +E L+ E   +D+P  T+VLS P    T 
Sbjct: 16  AQLVALARFVFERLYIHPQAELSILLVDEPAMEKLHLEL--MDEPGATDVLSVPMDELTP 73

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                     MLGDI +  ++ E++A   G   ++ ++ L  HG LHLLGYDH D ++  
Sbjct: 74  GTPDKPTPQGMLGDIAVCPQVAEVQARNAGHSTQDEMLLLTTHGILHLLGYDHADPEEKE 133

Query: 150 VMEGLERSILEDL-GINDPYEV 170
            M GL+R +LE   G   P E 
Sbjct: 134 EMFGLQRELLEGFTGKEAPSET 155


>gi|332530325|ref|ZP_08406271.1| putative metal-dependent hydrolase [Hylemonella gracilis ATCC
           19624]
 gi|332040311|gb|EGI76691.1| putative metal-dependent hydrolase [Hylemonella gracilis ATCC
           19624]
          Length = 169

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YR  D  TNVL+F            ++  D+VL   ++  EA    K  E H  HL
Sbjct: 75  LNRDYRNKDYATNVLTFDYT------KEPVVTADLVLCAPVVAKEAKEQNKSPEEHYAHL 128

Query: 130 IIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   + DA  ME LE  ++E +G+ +PYE
Sbjct: 129 LVHGTLHAQGYDHETSETDALEMEALEVLLMEGMGLGNPYE 169


>gi|218781165|ref|YP_002432483.1| hypothetical protein Dalk_3326 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762549|gb|ACL05015.1| protein of unknown function UPF0054 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 127

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 59/107 (55%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS++  D  R+  L+ EY G   PTNVL+FP      +  +  ++GD+V+  ++   EA
Sbjct: 18  ELSVLIVDGGRMAELHEEYVGKQGPTNVLAFPMTEGPFNEINPEIIGDVVICTDVAAKEA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              G +     + L+IHG LHL+G+DH + ++  +M+  E  + E  
Sbjct: 78  EDAGVDLYTRALELLIHGILHLVGHDHAEPEETALMQAKEAELFEQF 124


>gi|227514587|ref|ZP_03944636.1| metal-dependent hydrolase [Lactobacillus fermentum ATCC 14931]
 gi|227086998|gb|EEI22310.1| metal-dependent hydrolase [Lactobacillus fermentum ATCC 14931]
          Length = 157

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 18/145 (12%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L E   A+A   L      V E   E+SL F  +  I  LN +YRGID+ T+V+SF  A 
Sbjct: 20  LAEKALAQAAERLD-----VPEQ-AEMSLTFVLNPEIRELNRDYRGIDRATDVISF--AI 71

Query: 91  ASSDGCSSLM----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
              D  ++L           LGD+V++ + +  +A  L    +  L +L++HGFLHL GY
Sbjct: 72  EDDDDLANLPAEIRAELPVELGDLVISIDKVTEQALFLNHSADRELGYLLVHGFLHLNGY 131

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH +  D   M  L+  IL+ LG++
Sbjct: 132 DHEEPADEKKMFTLQEEILDGLGLS 156


>gi|78223573|ref|YP_385320.1| hypothetical protein Gmet_2370 [Geobacter metallireducens GS-15]
 gi|123742815|sp|Q39T29|RRMF_GEOMG RecName: Full=Probable rRNA maturation factor
 gi|78194828|gb|ABB32595.1| protein of unknown function UPF0054 [Geobacter metallireducens
           GS-15]
          Length = 150

 Score = 70.9 bits (172), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 2/106 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+V T    I  +N EY   D+PTNV+SF  A       +  MLGD++++ +    EA
Sbjct: 36  ELSVVITGDLGIRRVNREYLHKDRPTNVISFAMAEGEFGALNPAMLGDVIISADTAAREA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSIL 159
              G  F + L  L++HG LH+ GYDH    + +A  ME  ER I 
Sbjct: 96  EEGGVSFWSRLCFLLLHGILHITGYDHERSGEAEARRMEAKEREIF 141


>gi|268611989|ref|ZP_06145716.1| hypothetical protein RflaF_21081 [Ruminococcus flavefaciens FD-1]
          Length = 170

 Score = 70.9 bits (172), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 10/118 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-------SSLMLGDIVLAY 108
           E+S+ F  ++ I+ LN  YR  D  T+VLSFP      DG         ++ LGD+V++ 
Sbjct: 43  EVSVSFVSNNEIKNLNKIYRNKDSVTDVLSFP--LTGDDGTVEINPETGAVQLGDVVISL 100

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGIN 165
           E    +A   G   E  +  L +H  LHLLGYDH   + D  +M   E S+LE LGI+
Sbjct: 101 ETAVKQAQNYGHSLEREVGFLTVHSMLHLLGYDHETSQLDQRIMREKEESVLEKLGIS 158


>gi|315640635|ref|ZP_07895741.1| metalloprotease [Enterococcus italicus DSM 15952]
 gi|315483663|gb|EFU74153.1| metalloprotease [Enterococcus italicus DSM 15952]
          Length = 160

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 12/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----------PTAFASS--DGCSSLMLG 102
            E+S+ F D++ I+ +N  YR  D PT+V+SF          P  F     D      LG
Sbjct: 37  TEMSITFMDNNEIQEINRVYRNKDMPTDVISFALEEEGEDELPIIFDEEFDDSQFPRNLG 96

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           D++++ E    +A   G   +  L  L +HGFLHL GYDH+  +D  VM GL++ IL+  
Sbjct: 97  DLMISVERANEQAEEYGHSVDRELGFLALHGFLHLNGYDHMTPEDEKVMFGLQKEILDAY 156

Query: 163 GI 164
           G+
Sbjct: 157 GL 158


>gi|308233980|ref|ZP_07664717.1| hypothetical protein AvagD15_02962 [Atopobium vaginae DSM 15829]
 gi|328944011|ref|ZP_08241476.1| hypothetical protein HMPREF0091_10701 [Atopobium vaginae DSM 15829]
 gi|327491980|gb|EGF23754.1| hypothetical protein HMPREF0091_10701 [Atopobium vaginae DSM 15829]
          Length = 168

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 10/110 (9%)

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGCSSLMLGDIVLAYEIIEI 113
           + TD H I TLN  +R  D+PT+V+S           A+ + C    LGDIVLA   I  
Sbjct: 46  IVTDEH-IHTLNKTWRNQDRPTDVISLECERPDDPDLANGEVCE---LGDIVLAPNYIAH 101

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +A+      E+    L+IHG LHLLGYDH+ D +A VME LE  +L ++G
Sbjct: 102 QADSFHMAHEDECRLLLIHGMLHLLGYDHLTDDEAEVMEALEDRLLLEVG 151


>gi|226307220|ref|YP_002767180.1| hypothetical protein RER_37330 [Rhodococcus erythropolis PR4]
 gi|229493192|ref|ZP_04386984.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|259647013|sp|C1A1F6|RRMF_RHOE4 RecName: Full=Probable rRNA maturation factor
 gi|226186337|dbj|BAH34441.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
 gi|229319923|gb|EEN85752.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 180

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 11/132 (8%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------A 89
             LIS   FV   +      ELS+V  DS  +  L+  +  +  PT+V+SFP        
Sbjct: 16  PELISVARFVIARMDVHPAAELSMVLVDSATMADLHVRWMDLPGPTDVMSFPMDELEPGG 75

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
              S      MLGDIVL       +A+  G    + L  L +HG LHLLGYDH + ++  
Sbjct: 76  RPDSPEPGPSMLGDIVLCPSFAADQADKAGHSLAHELALLTVHGVLHLLGYDHAEPEEEK 135

Query: 150 VMEGLERSILED 161
            M GL+ S+LE+
Sbjct: 136 EMFGLQNSLLEE 147


>gi|219847946|ref|YP_002462379.1| hypothetical protein Cagg_1028 [Chloroflexus aggregans DSM 9485]
 gi|254799905|sp|B8G6K6|RRMF_CHLAD RecName: Full=Probable rRNA maturation factor
 gi|219542205|gb|ACL23943.1| protein of unknown function UPF0054 [Chloroflexus aggregans DSM
           9485]
          Length = 153

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 15/119 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---------LGDIVL 106
           E+ +  T    +  LN ++RG+D PT+VLSF     + DG SS           LGDI +
Sbjct: 38  EVCIRITTDAELHRLNRDFRGVDAPTDVLSF-----ADDGNSSQFVTAPNLPRYLGDIAI 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGI 164
           +Y+ + ++A   G      L +L +HG LHLLGYDH     D  +M   E +++  LG+
Sbjct: 93  SYDRVLVQAAEYGHSPARELAYLTVHGMLHLLGYDHERGPADEALMRAREEAVMTALGL 151


>gi|329770521|ref|ZP_08261899.1| metalloprotease [Gemella sanguinis M325]
 gi|328836270|gb|EGF85939.1| metalloprotease [Gemella sanguinis M325]
          Length = 157

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 11/124 (8%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP---------TAFASSDGCSSLM 100
           +  +I E+SL F +   I+ +N +YRG D PT+V+SF          +     D  +S+ 
Sbjct: 34  INTDITEMSLSFVNKEEIQEINRDYRGKDVPTDVISFALNDEVESEISIIGLEDEINSI- 92

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            GD+++  +I + +A      F+  +  L +HGFLHLLGYDH+  +D   M   +  ILE
Sbjct: 93  -GDVIICVDIAKEQAEDYNHSFDREIGFLAVHGFLHLLGYDHMTPEDEKEMFEKQDKILE 151

Query: 161 DLGI 164
           + G+
Sbjct: 152 EFGL 155


>gi|330469595|ref|YP_004407338.1| metal-binding heat shock protein [Verrucosispora maris AB-18-032]
 gi|328812566|gb|AEB46738.1| metal-binding heat shock protein [Verrucosispora maris AB-18-032]
          Length = 157

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDI 104
           + ELS++  D   +  LN  + G D PT+VL+FP    S D         G    +LGDI
Sbjct: 34  LAELSVLLVDVGYMTELNHRWMGGDGPTDVLAFPMDEGSIDHGPGENAAVGGEPALLGDI 93

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           VL  E+   +A   G   ++ L  L +HG LHLLGYDH + ++   M GL+  +L
Sbjct: 94  VLCPEVAAKQAATAGHSADDELHLLTVHGVLHLLGYDHAEPEEEREMFGLQARLL 148


>gi|301165909|emb|CBW25482.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 206

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 12/123 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-------GDIVLAY 108
           EL L       I+ LN E+R  DK T+VLSFP   +   G   L +       GDIV+  
Sbjct: 80  ELDLSLCSEDEIKELNSEHRDKDKVTDVLSFPGYDSLRKGAEDLFIFEENLHFGDIVICR 139

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLE----RSILEDLG 163
           E+ + +A      +E  LVHL +HGFLHL GYDH + +++  +   LE    + I E++G
Sbjct: 140 EVCQKQAQEFAITYEQELVHLFVHGFLHLCGYDHEISEEEDKIHFSLEELLVKEIYENMG 199

Query: 164 IND 166
           +++
Sbjct: 200 LDN 202


>gi|266623022|ref|ZP_06115957.1| putative metalloprotease [Clostridium hathewayi DSM 13479]
 gi|288865224|gb|EFC97522.1| putative metalloprotease [Clostridium hathewayi DSM 13479]
          Length = 165

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 16/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
            E++++ TD+  I  +N EYR ID  T+VLSFP A   S                     
Sbjct: 38  AEVNVLLTDNEDIRQINKEYRDIDNATDVLSFPMADYDSPSDFDRLEDMASDYFNPETGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIV++ + ++ +A   G      L  L+ H  LHL GYDH+ D++  VME  +  I
Sbjct: 98  LLLGDIVISVDKVKEQAEKYGHSETRELAFLVAHSMLHLCGYDHMVDEERLVMEKKQEEI 157

Query: 159 LEDLG 163
           L+  G
Sbjct: 158 LKRGG 162


>gi|160915030|ref|ZP_02077243.1| hypothetical protein EUBDOL_01038 [Eubacterium dolichum DSM 3991]
 gi|158432829|gb|EDP11118.1| hypothetical protein EUBDOL_01038 [Eubacterium dolichum DSM 3991]
          Length = 155

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIE 114
           S++F    +I  +N EYR ID+PT+V+SF     + +      S+ LGDI +  E I  +
Sbjct: 41  SVIFVTPQKIHEINREYRHIDRPTDVISFALLDEADEYEIMEDSIELGDIFINIEAIVKQ 100

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           A+  G      +  L  HG LHLLGYDH++ ++  VM  L+  IL D+
Sbjct: 101 ASEYGHSMRREVCFLFTHGLLHLLGYDHMEQEEERVMFALQDDILYDI 148


>gi|332297629|ref|YP_004439551.1| metalloprotease ybeY [Treponema brennaborense DSM 12168]
 gi|332180732|gb|AEE16420.1| metalloprotease ybeY [Treponema brennaborense DSM 12168]
          Length = 162

 Score = 70.5 bits (171), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLMLGDIVLAYEIIEI 113
           E+S++F     I  LN +YR I  PT+VLSF     +   DG      GDIV++ + +E 
Sbjct: 42  EVSVLFCADPFIAELNLQYRSIKGPTDVLSFELGDEYIDEDGVPWTSAGDIVVSIDTLER 101

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            A   G   +  L  L+IHG LHL GYDH D+     M  L+ SIL D 
Sbjct: 102 NALEFGVPVDQELKRLLIHGVLHLSGYDHSDNSPEQEMLVLQESILPDF 150


>gi|184155314|ref|YP_001843654.1| hypothetical protein LAF_0838 [Lactobacillus fermentum IFO 3956]
 gi|238692971|sp|B2GBZ2|RRMF_LACF3 RecName: Full=Probable rRNA maturation factor
 gi|183226658|dbj|BAG27174.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
          Length = 157

 Score = 70.5 bits (171), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 18/145 (12%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L E   A+A   L      V E   E+SL F  +  I  LN +YRGID+ T+V+SF  A 
Sbjct: 20  LAEKALAQAAERLD-----VPEQ-AEMSLTFVLNPEIRELNRDYRGIDRATDVISF--AI 71

Query: 91  ASSDGCSSLM----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
              D  ++L           LGD+V++ + +  +A  L    +  L +L++HGFLHL GY
Sbjct: 72  EDDDDLANLPAEIRAELPVELGDLVISIDKVTEQALFLNHSADRELGYLLVHGFLHLNGY 131

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH +  D   M  L+  IL+ LG++
Sbjct: 132 DHEEPADEEKMFTLQEEILDGLGLS 156


>gi|309811100|ref|ZP_07704898.1| translation metalloprotein YbeY [Dermacoccus sp. Ellin185]
 gi|308435064|gb|EFP58898.1| translation metalloprotein YbeY [Dermacoccus sp. Ellin185]
          Length = 168

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 5/117 (4%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLG 102
             FV  N VELS+   D   +ETL+ ++  +  PT+V+SFP    T  +  +     MLG
Sbjct: 28  AMFVHPN-VELSIRIIDEAAMETLHVQWMDLPGPTDVMSFPMDELTPGSEREPSQEGMLG 86

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           DIVL   +   +A   G +    L+ L +HG LHLLGYDH +  +   M  L+R+IL
Sbjct: 87  DIVLCPSVAAAQAAAAGHDTMEELLLLTVHGVLHLLGYDHAEPDERVEMFELQRTIL 143


>gi|147669820|ref|YP_001214638.1| hypothetical protein DehaBAV1_1181 [Dehalococcoides sp. BAV1]
 gi|189038619|sp|A5FPW5|RRMF_DEHSB RecName: Full=Probable rRNA maturation factor
 gi|146270768|gb|ABQ17760.1| protein of unknown function UPF0054 [Dehalococcoides sp. BAV1]
          Length = 160

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 12/137 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF- 86
            + L    F K +++   K      +  EL +V T    I+ LN +YR +D+PT+VLSF 
Sbjct: 11  FKKLVSAQFLKKIASETLKAQAADPS-SELGIVITGQEEIKELNCKYRQLDEPTDVLSFY 69

Query: 87  -----PTAFASSDGCSS-----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
                P    + D   +       LG+++++Y   E++A   G    + L  L+IHG LH
Sbjct: 70  MLEENPENLTAPDDFPTPPDEATHLGEVIISYPQAELQAGAAGHSVNHELAFLLIHGVLH 129

Query: 137 LLGYDHVDDKDACVMEG 153
           LLGYDH +     VM+ 
Sbjct: 130 LLGYDHHETAAEAVMKS 146


>gi|289433031|ref|YP_003462904.1| hypothetical protein DehalGT_1088 [Dehalococcoides sp. GT]
 gi|288946751|gb|ADC74448.1| protein of unknown function UPF0054 [Dehalococcoides sp. GT]
          Length = 160

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 12/137 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF- 86
            + L    F K +++   K      +  EL +V T    I+ LN +YR +D+PT+VLSF 
Sbjct: 11  FKKLVSAQFLKKIASETLKAQAADPS-SELGIVITGQEEIKELNCKYRQLDEPTDVLSFY 69

Query: 87  -----PTAFASSDGCSS-----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
                P    + D   +       LG+++++Y   E++A   G    + L  L+IHG LH
Sbjct: 70  MLEENPENLTAPDDFPTPPDEATHLGEVIISYPQAELQAGAAGHSVNHELAFLLIHGVLH 129

Query: 137 LLGYDHVDDKDACVMEG 153
           LLGYDH +     VM+ 
Sbjct: 130 LLGYDHHETAAEAVMKS 146


>gi|291277187|ref|YP_003516959.1| hypothetical protein HMU09740 [Helicobacter mustelae 12198]
 gi|290964381|emb|CBG40231.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 151

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 10/113 (8%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
           TL E    + ++  +S    ++       L+F D + I+ +N EYR  DKPT+VLSFP  
Sbjct: 13  TLLETARLEKIAQTLSPQRMIE-------LLFVDENMIQGMNKEYRNQDKPTDVLSFPL- 64

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
              + G +++ LG +V+   I +  A+  G   E  +  L IHG LHL GYDH
Sbjct: 65  --DAMGIANMPLGSVVICIPIAQGAAHFFGHSLEEEIALLFIHGVLHLQGYDH 115


>gi|313682547|ref|YP_004060285.1| hypothetical protein Sulku_1423 [Sulfuricurvum kujiense DSM 16994]
 gi|313155407|gb|ADR34085.1| protein of unknown function UPF0054 [Sulfuricurvum kujiense DSM
           16994]
          Length = 187

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 13/134 (9%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVK--ENIV------ELSLVFTDSHRIE 68
           +E+ ++G  I ++ +C       + N   K Y  +  E I       E+ L+ TD+  I 
Sbjct: 28  IESPIFGTFISIQNICYNTAMIELDNRTDKTYNFQLLEQIADLLSDREIELILTDNVEIA 87

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+RGIDK T+VLSFP     SD      LG IV++ + +   AN L    ++ +  
Sbjct: 88  EINREFRGIDKATDVLSFP-----SDPFPGAPLGSIVISVDKVASVANELKHSEDHEIAL 142

Query: 129 LIIHGFLHLLGYDH 142
           L IHG LHLLG+DH
Sbjct: 143 LFIHGMLHLLGFDH 156


>gi|300310056|ref|YP_003774148.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1]
 gi|300072841|gb|ADJ62240.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1]
          Length = 151

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 13/161 (8%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +P+  L ++V+   + DE   +T+   +  + V   +    F      +L+L F  S   
Sbjct: 1   MPKHKLTLSVQ---YADERLKKTITTTLLRRWVQAAL----FAP---AQLTLRFVGSEEG 50

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN +YRG D  TNVL+F     + D  S +   DI+   +++E EA    K  E H  
Sbjct: 51  RDLNRDYRGKDYATNVLTFAY---TEDEDSEVTEADIIFCTDVLEKEAAEQKKSVEEHTA 107

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HL++HG LH  GYDH DD++A  ME LE  IL  LG  +PY
Sbjct: 108 HLVVHGVLHAQGYDHEDDEEADEMEALETEILAGLGYANPY 148


>gi|188591271|ref|YP_001795871.1| unkown domain/ metalloprotease fusion protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170938165|emb|CAP63151.1| putative metal-dependent hydrolase, COG0319; putative
           diacylglycerol kinase [Cupriavidus taiwanensis LMG
           19424]
          Length = 251

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 4/115 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L++ F       TLN  YRG D  TNVL+F  A    D  +    GDIVL   ++E EA 
Sbjct: 135 LTIRFVGEEEGRTLNRTYRGKDYATNVLTFAYAEREDDPVT----GDIVLCCPVVEAEAR 190

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              K  E H  HL++HG LH  GY+H DD +A  ME +E   L+ LG  DPY  +
Sbjct: 191 AQRKPLEAHYAHLVVHGVLHAQGYEHEDDAEAEEMEAIETETLQALGYADPYRAE 245


>gi|317497353|ref|ZP_07955676.1| hypothetical protein HMPREF0996_00656 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895422|gb|EFV17581.1| hypothetical protein HMPREF0996_00656 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 170

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 15/119 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---------------FASSDGCSSLM 100
           E++L+ TD+  I  +N E R ID+PT+VLSFP A                A        +
Sbjct: 39  EVNLMLTDNETIHAINKEQREIDRPTDVLSFPMAEYEEPADFSKIEEDPMAFDPESGEFL 98

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           LGDIV++ + +  +A   G   E     LI H  LHL GYDH+++++   ME  +  IL
Sbjct: 99  LGDIVISMDKVWEQAENYGHSREREYAFLIAHSMLHLFGYDHMEEEERKDMEKRQEEIL 157


>gi|93005420|ref|YP_579857.1| hypothetical protein Pcryo_0590 [Psychrobacter cryohalolentis K5]
 gi|122415831|sp|Q1QD80|RRMF_PSYCK RecName: Full=Probable rRNA maturation factor
 gi|92393098|gb|ABE74373.1| protein of unknown function UPF0054 [Psychrobacter cryohalolentis
           K5]
          Length = 155

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAY 108
           +E I  L +  TD      LN E R  D  TN+LS+P+   ++      +L LG++++ +
Sbjct: 34  QEKIKVLDIYITDEVEGRELNLEARQKDYATNILSYPSDLPAAIIGLMPTLPLGELIICH 93

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDP 167
            ++  EA    KE   H+ HL+IHG LHLLG+DH +   +   ME  E  IL  L I +P
Sbjct: 94  AVMIREAAEQNKEAVQHISHLLIHGVLHLLGFDHELGQAEQDEMERFEIEILAGLNIPNP 153

Query: 168 Y 168
           Y
Sbjct: 154 Y 154


>gi|259503179|ref|ZP_05746081.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259168836|gb|EEW53331.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 159

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 12/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+S+    +  I  LN +YRG+D+ T+VLSF  A    D    +M           LGD
Sbjct: 38  TEMSVTLMTNPAIRKLNQQYRGVDRATDVLSF-AAEERGDETPIIMAPELAAEIPENLGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + ++ + +  +A  LG   +  L  L++HGFLHL GYDH +  D   M  L+R IL + G
Sbjct: 97  LFVSVDKVAEQAKFLGHSADRELGFLVVHGFLHLNGYDHEEPADEQRMFDLQREILNEYG 156

Query: 164 IN 165
           + 
Sbjct: 157 LQ 158


>gi|73749054|ref|YP_308293.1| hypothetical protein cbdb_A1322 [Dehalococcoides sp. CBDB1]
 gi|123620002|sp|Q3ZYT5|RRMF_DEHSC RecName: Full=Probable rRNA maturation factor
 gi|73660770|emb|CAI83377.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
          Length = 166

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 12/137 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF- 86
            + L    F K +++   K      +  EL +V T    I+ LN +YR +D+PT+VLSF 
Sbjct: 17  FKKLVSAQFLKKIASETLKAQAADPS-SELGIVITGQEEIKELNCKYRQLDEPTDVLSFY 75

Query: 87  -----PTAFASSDGCSS-----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
                P    + D   +       LG+++++Y   E++A   G    + L  L+IHG LH
Sbjct: 76  MLEENPENLTAPDDFPTPPDEATHLGEVIISYPQAELQAGAAGHSVNHELAFLLIHGVLH 135

Query: 137 LLGYDHVDDKDACVMEG 153
           LLGYDH +     VM+ 
Sbjct: 136 LLGYDHHETAAEAVMKS 152


>gi|302386448|ref|YP_003822270.1| protein of unknown function UPF0054 [Clostridium saccharolyticum
           WM1]
 gi|302197076|gb|ADL04647.1| protein of unknown function UPF0054 [Clostridium saccharolyticum
           WM1]
          Length = 165

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 16/121 (13%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFA----SSDGC-----SS 98
            E++++ T +  I  +N EYR +D PT+VLSFP       + F     ++D C       
Sbjct: 38  AEVNVLITGNEEIRQINREYRDMDTPTDVLSFPMIEYECPSEFEHLEETADDCFHPETGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIV++   +E +A   G      L  L+ H  LHL GYDH+++ +  +ME  +  I
Sbjct: 98  LLLGDIVISVNKVEEQAEKYGHSQTRELAFLVAHSMLHLCGYDHMEEDEREIMEKKQEEI 157

Query: 159 L 159
           L
Sbjct: 158 L 158


>gi|170078371|ref|YP_001735009.1| hypothetical protein SYNPCC7002_A1764 [Synechococcus sp. PCC 7002]
 gi|238692816|sp|B1XPN9|RRMF_SYNP2 RecName: Full=Probable rRNA maturation factor
 gi|169886040|gb|ACA99753.1| conserved hypothetical protein (TIGR00043) [Synechococcus sp. PCC
           7002]
          Length = 163

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 29/164 (17%)

Query: 9   PRLDLQIAVENA-----------LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVEL 57
           P L+ +I VENA            W + +  R L E+  A   ++    GY       EL
Sbjct: 3   PVLECEIFVENASGLELPELAIAPWENHLQ-RWLPELTAALPPAD----GY-------EL 50

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASS-DGCSSLMLGDIVLAYEIIEI 113
           +L FT    I  LN +YR  D+PT+VLSF      FAS       L LGDI+++ E  + 
Sbjct: 51  TLRFTTDAEIHNLNHQYRHKDQPTDVLSFAALEDNFASPLPPGEPLYLGDIIVSVETAQR 110

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           +A       +  L  L+ HG LHLLG+DH D  +A ++E L+R 
Sbjct: 111 QAQERQHSLQTELGWLVSHGLLHLLGWDHPD--EARLIEMLDRQ 152


>gi|78213952|ref|YP_382731.1| hypothetical protein Syncc9605_2444 [Synechococcus sp. CC9605]
 gi|123577427|sp|Q3AGV6|RRMF_SYNSC RecName: Full=Probable rRNA maturation factor
 gi|78198411|gb|ABB36176.1| Protein of unknown function UPF0054 [Synechococcus sp. CC9605]
          Length = 166

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS--SLMLGDIVLAYEIIE 112
           + L L F D   I  LN  +R    PT+VLSF     + D     S+ LGDIV++ E   
Sbjct: 57  LSLGLRFIDDATIADLNSTWRQKTGPTDVLSFAALDDAGDWMEGPSIELGDIVVSLETAR 116

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +A   G   +  L  L+ HG LHLLG+DH D+K    M  L+  +L D
Sbjct: 117 RQAQEQGHSLQQELRWLVSHGLLHLLGWDHPDEKSLATMLALQERLLGD 165


>gi|25028742|ref|NP_738796.1| putative metalloprotease [Corynebacterium efficiens YS-314]
 gi|259507803|ref|ZP_05750703.1| metalloprotease [Corynebacterium efficiens YS-314]
 gi|29428209|sp|Q8FNF8|RRMF_COREF RecName: Full=Probable rRNA maturation factor
 gi|23494028|dbj|BAC18996.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164596|gb|EEW49150.1| metalloprotease [Corynebacterium efficiens YS-314]
          Length = 200

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSS--LMLGDIVLA 107
            E S+   DS  I  L+ ++  ++ PT+V+SFP       ++  DG +    MLGDIVL 
Sbjct: 36  AEASIHIVDSDTIAELHVKWLDLEGPTDVMSFPMDELTPGYSRPDGGAPGPAMLGDIVLC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            E  E +A   G +  + L  L +HG LHLLGYDHV+      M  L+  +L D
Sbjct: 96  PEFAEKQATKAGHDLSHELALLTVHGCLHLLGYDHVEPAQEREMFALQNELLAD 149


>gi|149194504|ref|ZP_01871600.1| hypothetical protein CMTB2_00634 [Caminibacter mediatlanticus TB-2]
 gi|149135248|gb|EDM23728.1| hypothetical protein CMTB2_00634 [Caminibacter mediatlanticus TB-2]
          Length = 137

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 7/109 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+ T    I+ LN EYR  DKPT+VLSFP      +    + LG IV++ +  + EA
Sbjct: 28  DVELILTTDEEIQKLNKEYRNKDKPTDVLSFPL-----EDFPGMPLGSIVISIDTAKKEA 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              G   ++ +  L IHG LHLLGYDH  + D   M   E+ I+E   +
Sbjct: 83  EKFGHSIDDEIKLLFIHGLLHLLGYDH--EVDNGEMREKEKEIIEKFNL 129


>gi|26553790|ref|NP_757724.1| hypothetical protein MYPE3350 [Mycoplasma penetrans HF-2]
 gi|29428203|sp|Q8EW68|RRMF_MYCPE RecName: Full=Probable rRNA maturation factor
 gi|26453797|dbj|BAC44128.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
          Length = 150

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 9/144 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKE---NIVELSLVFTDSHRIETLNFEYRGIDKP 80
           DE    +  ++   K VS  I    F++E   N +   L   D++  + +N +YR  D P
Sbjct: 8   DEKKFLSKKDISLIKKVSKFI----FIEEKLKNKIIFELHIIDNNESQKINKQYRNKDYP 63

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T+V+SF  +F       + +LG+I L+YE +  +A      FE  L  L+ HG  HLLGY
Sbjct: 64  TDVISF--SFWEEGLLKTALLGEIYLSYEKVVSQAEEFKHSFERELGFLVSHGIYHLLGY 121

Query: 141 DHVDDKDACVMEGLERSILEDLGI 164
           DH ++ +A +M G +  +L+  G+
Sbjct: 122 DHEEEDEAKIMFGKQYQVLKLCGL 145


>gi|326791149|ref|YP_004308970.1| metalloprotease ybeY [Clostridium lentocellum DSM 5427]
 gi|326541913|gb|ADZ83772.1| metalloprotease ybeY [Clostridium lentocellum DSM 5427]
          Length = 166

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------------TAFASSDGCSS 98
           VE+SL   D   I  +N E+R ID+PT+VLSFP                TA   +     
Sbjct: 39  VEVSLTVVDLDAIHEINKEHREIDRPTDVLSFPQIDTEYIGHINWDTLDTASCVNYDTEE 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           ++LGDI+L  +  + +AN  G      +  L+ H   HLLGYDH+ ++D   M   + S+
Sbjct: 99  VILGDIILCADKAKEQANNYGHSLTREVCFLVAHSMFHLLGYDHMTEEDEKTMVRKQESV 158

Query: 159 LEDLGI 164
           L+ L I
Sbjct: 159 LQCLSI 164


>gi|332652573|ref|ZP_08418318.1| putative metalloprotease [Ruminococcaceae bacterium D16]
 gi|332517719|gb|EGJ47322.1| putative metalloprotease [Ruminococcaceae bacterium D16]
          Length = 322

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L+ +I +E  + G E +   L +V+ A     L ++G  V     E+ ++FTD   I  +
Sbjct: 162 LNHEIIIETEVDGAEEYADLLRQVIPAA----LAAEGVDVP---CEVDVLFTDDEGIHQI 214

Query: 71  NFEYRGIDKPTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N E R +D+PT+VLSFP          T   +  G + + LGD+V++ E  + +    G 
Sbjct: 215 NLEQREVDRPTDVLSFPMFDLQPGEHPTQEDADPGDNLVPLGDMVISLERAKAQGEEYGH 274

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKD-ACVMEGLERSILEDLGI 164
                + +L +H  LHLLGYDH+D+      M   E  IL  LGI
Sbjct: 275 GTRREVAYLAVHSVLHLLGYDHMDEGPMKKQMRQREEEILGTLGI 319


>gi|116333396|ref|YP_794923.1| metal-dependent hydrolase [Lactobacillus brevis ATCC 367]
 gi|122269917|sp|Q03SD0|RRMF_LACBA RecName: Full=Probable rRNA maturation factor
 gi|116098743|gb|ABJ63892.1| Predicted metal-dependent hydrolase [Lactobacillus brevis ATCC 367]
          Length = 162

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 13/123 (10%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-------------L 101
            E+S+   ++  I  +N +YRG+D+ T+V+SF       +     +             +
Sbjct: 38  TEMSVTLMNNEDIHRINQQYRGVDRATDVISFAIEDDDEEAADFPLVMDDELAAEIPENI 97

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI ++ + +  +A+ LG  +E  L  L++HGFLHL GYDH++ +D  VM  L+  IL+ 
Sbjct: 98  GDIFVSMDKVAEQADYLGHSYERELGFLVVHGFLHLNGYDHMEPEDEKVMFKLQADILDA 157

Query: 162 LGI 164
            G+
Sbjct: 158 YGL 160


>gi|62901442|sp|Q74AR8|RRMF_GEOSL RecName: Full=Probable rRNA maturation factor
          Length = 178

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 15/168 (8%)

Query: 4   KKVNLP--RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVF 61
           K+   P  R  L++A+ N      I  R L +V    A + L + GY       ELS+V 
Sbjct: 18  KRTKRPEERRPLKVAITNRQKRHPIGTRRLRKV----AETILGALGY----PDSELSVVI 69

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           T    I  +N +Y G D+PTNV+SF          +  +LGD++++ +    EA   G  
Sbjct: 70  TGDLGIRRVNRDYLGKDRPTNVISFAMGEGDFGDLNPDVLGDVIISADTAAREAEEAGIA 129

Query: 122 FENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSI---LEDLGI 164
           F + L  L++HG LH+ GYDH    + +A  ME  ER I   LE+ G+
Sbjct: 130 FWSRLCFLLLHGTLHITGYDHERSGEAEARRMEAKEREIFALLENGGL 177


>gi|51245457|ref|YP_065341.1| pyridoxal phosphate biosynthetic protein [Desulfotalea psychrophila
           LSv54]
 gi|50876494|emb|CAG36334.1| probable pyridoxal phosphate biosynthetic protein [Desulfotalea
           psychrophila LSv54]
          Length = 393

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 4/118 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIEI 113
           L++VF    ++   N  YR    PTNVLSFP A  S +    +    LGDI+++ +    
Sbjct: 37  LNIVFVSDAQMTWFNEHYREKKGPTNVLSFPFAEGSEEFLQQIPVHELGDIIISVDTAMR 96

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYEV 170
           EA   G+   + L  L++HG LHL+GYDH    +DA +ME  E+ +L++  IN  +++
Sbjct: 97  EAIEYGQTISHRLNWLMVHGILHLVGYDHERGPEDALLMEDKEQVLLKEYAINRRFKM 154


>gi|291287436|ref|YP_003504252.1| hypothetical protein Dacet_1527 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884596|gb|ADD68296.1| protein of unknown function UPF0054 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 151

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 4/93 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-SLMLGDIVLAYEIIEIE 114
           E+SL+ T   RI+ LN EYR  D+ T+VLSFP    S D  S   MLGDIV++ E  + +
Sbjct: 39  EISLLLTTDDRIKELNGEYRQKDRSTDVLSFPM---SEDPLSEGGMLGDIVISLETAKEQ 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
           A+      +  +  L IHG LHL+GY+H +D D
Sbjct: 96  ADEAAIMPDREIAFLFIHGLLHLMGYEHENDPD 128


>gi|119025739|ref|YP_909584.1| putative metalloprotease [Bifidobacterium adolescentis ATCC 15703]
 gi|145558837|sp|A1A1B9|RRMF_BIFAA RecName: Full=Probable rRNA maturation factor
 gi|118765323|dbj|BAF39502.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 181

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL--MLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP       DG + +  +LGDIVL   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGGTEMEGVLGDIVLCPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|154487439|ref|ZP_02028846.1| hypothetical protein BIFADO_01291 [Bifidobacterium adolescentis
           L2-32]
 gi|154083957|gb|EDN83002.1| hypothetical protein BIFADO_01291 [Bifidobacterium adolescentis
           L2-32]
          Length = 181

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL--MLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP       DG + +  +LGDIVL   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGGTEMEGVLGDIVLCPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|226360377|ref|YP_002778155.1| metalloprotease [Rhodococcus opacus B4]
 gi|254807287|sp|C1AUK2|RRMF_RHOOB RecName: Full=Probable rRNA maturation factor
 gi|226238862|dbj|BAH49210.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 180

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 11/131 (8%)

Query: 42  NLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AF 90
            LIS   FV   +      ELS+V  DS  +  L+  +  +  PT+V+SFP         
Sbjct: 17  ELISVARFVIARMDVHPAAELSMVLVDSATMADLHMRWMDLPGPTDVMSFPMDELEPGGR 76

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
             S      MLGDIVL       +A   G    + L  L +HG LHLLGYDH + ++   
Sbjct: 77  PDSPEPGPSMLGDIVLCPSFAADQAEKAGHPLAHELALLTVHGVLHLLGYDHAEPEEEKE 136

Query: 151 MEGLERSILED 161
           M GL+  +L+D
Sbjct: 137 MFGLQNQLLDD 147


>gi|291567588|dbj|BAI89860.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 186

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 21/138 (15%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---------PTAFASSDG 95
           +KGY       ELSL  TD   I+  N +YR +D+ T+VLSF         P    S   
Sbjct: 53  AKGY-------ELSLRLTDDREIQAFNAQYRQLDQATDVLSFAALETSLVMPAEHLSLHP 105

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           C    LGDI+++ E    +A          L  L  HG LHLLG+DH DD+    M   +
Sbjct: 106 C---YLGDIIISVETAFRQAQQARHNLTTELAWLTSHGLLHLLGWDHPDDRSLTRMLEQQ 162

Query: 156 RSILE--DLGINDPYEVD 171
           +++L+  +L I   Y  D
Sbjct: 163 KALLQKVNLQIGSGYAWD 180


>gi|15894575|ref|NP_347924.1| putative metalloprotease [Clostridium acetobutylicum ATCC 824]
 gi|26006917|sp|Q97JI7|RRMF_CLOAB RecName: Full=Probable rRNA maturation factor
 gi|15024222|gb|AAK79264.1|AE007641_10 Uncharacterized conserved predicted metal-binding protein, YQFG
           ortholog [Clostridium acetobutylicum ATCC 824]
 gi|325508707|gb|ADZ20343.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 166

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFAS-SDGCS---------S 98
           E+S++F D+  I  +N E R +DK T+VLSFP         F    + C          +
Sbjct: 39  EVSVIFVDNETIREINRENREVDKVTDVLSFPMLEYGEGKVFKDIYEECDFEDEYFDEGN 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDI L+ E  E ++   G  F     +L +H  LHL+GYDH+ D+D   M   E  I
Sbjct: 99  LVLGDIALSLERAEEQSKEYGHSFLREAAYLTVHSVLHLMGYDHMVDEDKIKMRKREEEI 158

Query: 159 LEDLGIN 165
           L    IN
Sbjct: 159 LSHFDIN 165


>gi|308273339|emb|CBX29942.1| Putative metalloprotease GSU2284 [uncultured Desulfobacterium sp.]
          Length = 173

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 3   VKKVNLPRLDLQIAVENALWG-------DEIHLRTLCEVVFAKAVSNLI--SKGYFVKEN 53
           +  +N+P+   Q A+E    G       +++ +R +     A+A+ N +   KG      
Sbjct: 5   ITALNIPKQQFQ-ALEKGKMGVLINNSQNKLRIRKIQVRKAAQAILNALDCPKG------ 57

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
             ELS++  D   I  LN +Y     P NV+SFP    +       +LGD+V++ E  + 
Sbjct: 58  --ELSILIEDDDGITGLNEKYLQRKGPANVISFPLRDVNFPEIEHDLLGDVVISAETTQR 115

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           E N LG  F+     L+IHG LHL GYDH
Sbjct: 116 EGNSLGTGFDKRFAELLIHGILHLFGYDH 144


>gi|307721060|ref|YP_003892200.1| hypothetical protein Saut_1140 [Sulfurimonas autotrophica DSM
           16294]
 gi|306979153|gb|ADN09188.1| protein of unknown function UPF0054 [Sulfurimonas autotrophica DSM
           16294]
          Length = 139

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 5/87 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LV T +  I+ +N EYR IDKPT+VLSFP      +      LG IV++ +++  +A
Sbjct: 28  DIELVVTTNDEIQQINKEYRNIDKPTDVLSFPY-----EEMPMSPLGSIVVSQDLVIAKA 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
             LG   E+    L IHG LHLLGYDH
Sbjct: 83  KELGHAQEDEFTLLFIHGLLHLLGYDH 109


>gi|260587672|ref|ZP_05853585.1| putative metalloprotease [Blautia hansenii DSM 20583]
 gi|331084038|ref|ZP_08333145.1| hypothetical protein HMPREF0992_02069 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541937|gb|EEX22506.1| putative metalloprotease [Blautia hansenii DSM 20583]
 gi|330402400|gb|EGG81970.1| hypothetical protein HMPREF0992_02069 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 164

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFA------SSDGC-----SSL 99
            E++LV T +  I+  N E+R ID+ T+VLSFP    TA A        D C       L
Sbjct: 38  TEINLVLTGNEEIQQTNREFRNIDRVTDVLSFPMLDFTAPADFSVAEEDDTCFHPESGEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDI++    ++ +A   G         LI H  LHL+GYDH++ ++A  ME  +  IL
Sbjct: 98  ILGDIMICIPRMQEQAESYGHGQIREFAFLIAHSMLHLMGYDHMEPEEAKEMERKQEEIL 157

Query: 160 EDLGIN 165
             LGI 
Sbjct: 158 ASLGIT 163


>gi|288574806|ref|ZP_06393163.1| protein of unknown function UPF0054 [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570547|gb|EFC92104.1| protein of unknown function UPF0054 [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 165

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGY--FVKENIVELSLVFTDSHRIE 68
           + L+I + N   GD      L E V +  +S L  + +  +   + V +S+   D   I 
Sbjct: 1   MKLEIGISNDE-GDPRPSAILDEEVLSLCISQLFDEVWPQWRMRDSVSISIATVDEETIR 59

Query: 69  TLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            LN  YRG D  T+VLSFP      F+  +  + L LGD+V+   I+   A    + ++ 
Sbjct: 60  QLNNSYRGCDSSTDVLSFPQWEDGVFSPPEEWTELPLGDVVICTSIVNRNAEERNESYDR 119

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            +  ++ H  LHLLG+DH   +    M  L+
Sbjct: 120 EMALMVFHSVLHLLGWDHDTQEKEAAMWSLQ 150


>gi|256827192|ref|YP_003151151.1| hypothetical protein Ccur_07650 [Cryptobacterium curtum DSM 15641]
 gi|256583335|gb|ACU94469.1| conserved hypothetical protein TIGR00043 [Cryptobacterium curtum
           DSM 15641]
          Length = 157

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 10/119 (8%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------GCSSLM 100
           K    E+S+ F D  RI  LN  YRG   PT+VLSF       D          G     
Sbjct: 32  KPASTEVSISFVDDDRIAELNEAYRGKVGPTDVLSFECDGYDDDFSVNNEADQVGEIPYE 91

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           LGDIV+A ++ E +  + G      +  L+ HG LHL GYDH+ +++A VME  E  +L
Sbjct: 92  LGDIVVAVDVAERQTALFGTTLAEEIELLVCHGLLHLCGYDHMVEEEAQVMEAREDELL 150


>gi|309388931|gb|ADO76811.1| protein of unknown function UPF0054 [Halanaerobium praevalens DSM
           2228]
          Length = 143

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 8/110 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+ F    +I+ LN +YR  D  T+VLSFP          + +LGDI+++ +I   +A
Sbjct: 40  EVSIAFVTKAKIKELNNDYRDKDSVTDVLSFP--------MDAEVLGDIIISAQIASEQA 91

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                  +  L +L +HG LHL GYDH   ++   M   E  +L  LGI+
Sbjct: 92  QEYKHSLKRELAYLTVHGMLHLFGYDHHGQEEKNEMRQKEERVLTQLGIS 141


>gi|302874331|ref|YP_003842964.1| hypothetical protein Clocel_1447 [Clostridium cellulovorans 743B]
 gi|307689402|ref|ZP_07631848.1| putative metalloprotease [Clostridium cellulovorans 743B]
 gi|302577188|gb|ADL51200.1| protein of unknown function UPF0054 [Clostridium cellulovorans
           743B]
          Length = 166

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 17/126 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------------TAFASSD-GCSS 98
           E+S+++ D+  I  +N + R IDK T+VLSFP                 +F   D     
Sbjct: 39  EISIIYVDNETIRNINSDTRKIDKVTDVLSFPMLDYPKGQVYKNTYEDQSFHVVDLDDGY 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGDIVL+ E  + ++   G  +     +L+IH  LHLLGYDH+++++  +M   E +I
Sbjct: 99  LVLGDIVLSLEKAKEQSEEYGHSYLRETCYLVIHSVLHLLGYDHMEEEEKGIMRKREETI 158

Query: 159 LEDLGI 164
           L +  I
Sbjct: 159 LSEFSI 164


>gi|227529164|ref|ZP_03959213.1| metal-dependent hydrolase [Lactobacillus vaginalis ATCC 49540]
 gi|227350889|gb|EEJ41180.1| metal-dependent hydrolase [Lactobacillus vaginalis ATCC 49540]
          Length = 159

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 10/121 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---------PTAFASSDGCS-SLMLGDI 104
            E+S+   ++  I  LN  YR +D+ T+VLSF         P   A        + LGD+
Sbjct: 38  TEMSVTLVNNPEIRELNSRYRHVDRATDVLSFAAEESGNETPIILAPELAAELPVNLGDL 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            ++ + +  +A  LG  F+  L  L++HGFLHL GYDH   +D   M  L+R IL+  G+
Sbjct: 98  FISIDKVAEQAKFLGHSFDRELGFLVVHGFLHLNGYDHEQPEDEKKMFTLQREILDQYGL 157

Query: 165 N 165
            
Sbjct: 158 K 158


>gi|308235188|ref|ZP_07665925.1| putative metalloprotease [Gardnerella vaginalis ATCC 14018]
 gi|311114843|ref|YP_003986064.1| putative metalloprotease [Gardnerella vaginalis ATCC 14019]
 gi|310946337|gb|ADP39041.1| probable metalloprotease [Gardnerella vaginalis ATCC 14019]
          Length = 175

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   I +L+ ++  ++ PT+V+SFP       S D  S  MLGD+V+   +  
Sbjct: 36  DLSITFVDPEPIASLHEKWMDLEGPTDVMSFPMDELTPGSDDKVSEGMLGDLVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   ++   M GL+R +L
Sbjct: 96  QQAAAAGHSTMEEMLLLTIHGMLHLLGYDHTTPQEEKQMFGLQRQLL 142


>gi|284050359|ref|ZP_06380569.1| putative metalloprotease [Arthrospira platensis str. Paraca]
          Length = 186

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 21/138 (15%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---------PTAFASSDG 95
           +KGY       ELSL  TD   I+  N +YR +D+ T+VLSF         P    S   
Sbjct: 53  AKGY-------ELSLRLTDDREIQAFNAQYRQLDQATDVLSFAALETSLVMPAEHLSLHP 105

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           C    LGDI+++ E    +A          L  L  HG LHLLG+DH DD+    M   +
Sbjct: 106 C---YLGDIIISVETAFRQAQQARHNLTTELAWLTSHGLLHLLGWDHPDDRSLTRMLEQQ 162

Query: 156 RSILE--DLGINDPYEVD 171
           +++L+  +L I   Y  D
Sbjct: 163 KALLQKVNLQIGSGYAWD 180


>gi|34556974|ref|NP_906789.1| putative metalloprotease [Wolinella succinogenes DSM 1740]
 gi|46577355|sp|Q7MSD7|RRMF_WOLSU RecName: Full=Probable rRNA maturation factor
 gi|34482689|emb|CAE09689.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 140

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 5/91 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ L+  D   +  +N E+RGIDK T+VLSFP      +G   L LG I+L+ + +  EA
Sbjct: 28  EVELILLDDEAMRKINQEHRGIDKSTDVLSFPL-----EGGDFLPLGSILLSIDRVRAEA 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
            + G   E     L IHG LHLLGYDH  D+
Sbjct: 83  ELRGHSIEAEAALLFIHGMLHLLGYDHEYDQ 113


>gi|254455702|ref|ZP_05069131.1| conserved hypothetical protein TIGR00043 [Candidatus Pelagibacter
           sp. HTCC7211]
 gi|207082704|gb|EDZ60130.1| conserved hypothetical protein TIGR00043 [Candidatus Pelagibacter
           sp. HTCC7211]
          Length = 153

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 5/116 (4%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS-LMLGDIVL 106
           Y  KE  V L+L+ +++  I+ LN ++R  +K T++LSFP  F +    S    LGDI++
Sbjct: 37  YLNKE--VSLTLLLSNNKGIKKLNKDFRNKNKSTDILSFP--FNNKIKISKKTYLGDIII 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +Y  +        K F++ ++ + IHGFLHLL +DH+ +KD   M   E  I + +
Sbjct: 93  SYNFMNKPRTQNLKSFQDKVIKIFIHGFLHLLNFDHIKNKDYKNMLREENRIYKSI 148


>gi|194017716|ref|ZP_03056326.1| conserved hypothetical protein [Bacillus pumilus ATCC 7061]
 gi|194010616|gb|EDW20188.1| conserved hypothetical protein [Bacillus pumilus ATCC 7061]
          Length = 159

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVL 106
            E+S+    +  I  +N EYRG D PT+V+SF              +D    + LGDI++
Sbjct: 39  AEVSVTIVSNEEIHQINKEYRGKDAPTDVISFALEEEGEGEIEIIGADDIPPV-LGDIII 97

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + +  + +A   G  F   L  L IHGFLHLLG+DH+ ++D   M   +  IL+D G++
Sbjct: 98  SVDRTKEQAEEYGHSFMRELGFLTIHGFLHLLGFDHMTEEDEKEMFAKQTKILDDYGLS 156


>gi|157693031|ref|YP_001487493.1| putative metalloprotease [Bacillus pumilus SAFR-032]
 gi|166987419|sp|A8FFB6|RRMF_BACP2 RecName: Full=Probable rRNA maturation factor
 gi|157681789|gb|ABV62933.1| possible metal-dependent hydrolase [Bacillus pumilus SAFR-032]
          Length = 159

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVL 106
            E+S+    +  I  +N EYRG D PT+V+SF              +D    + LGDI++
Sbjct: 39  AEVSVTIVSNEEIHQINKEYRGKDAPTDVISFALEEEGEGEIEIIGADDIPPV-LGDIII 97

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + +  + +A   G  F   L  L IHGFLHLLG+DH+ ++D   M   +  IL+D G++
Sbjct: 98  SVDRTKEQAEEYGHSFMRELGFLTIHGFLHLLGFDHMTEEDEKEMFAKQTKILDDYGLS 156


>gi|291279469|ref|YP_003496304.1| hypothetical protein DEFDS_1079 [Deferribacter desulfuricans SSM1]
 gi|290754171|dbj|BAI80548.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 154

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 6/108 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-SSLMLGDIVLAYEIIEI 113
            E+SL+ T+S  I+ LN  +R  D PT+VLSFP     +D C    +LGDIV+  + +E 
Sbjct: 42  AEISLLLTNSEEIKILNKNFRDKDYPTDVLSFPM----NDECLEDSILGDIVINLDKVEE 97

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILE 160
            +      +E  L  L IHG LHLLGYDH +++++  +M  L+  IL+
Sbjct: 98  YSKENDIPYERELAFLYIHGLLHLLGYDHEINEEEEKIMFDLQEDILK 145


>gi|47459183|ref|YP_016045.1| putative metal binding protein [Mycoplasma mobile 163K]
 gi|59799113|sp|Q6KHU4|RRMF_MYCMO RecName: Full=Probable rRNA maturation factor
 gi|47458512|gb|AAT27834.1| putative metal binding protein [Mycoplasma mobile 163K]
          Length = 152

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 3/132 (2%)

Query: 36  FAKAVSNLISK-GYFVKENI-VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS- 92
           + K   N++ +   F KE + +EL L   D+  I+ ++ +Y   DK T+VLSFP+  A+ 
Sbjct: 17  YKKDFQNILDEIALFFKEKLPLELDLNIVDNILIKKISKQYYKKDKETDVLSFPSELANM 76

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
            +      +G+I L YE + ++A       +    +L  HG +HL GYDHV + +A  M 
Sbjct: 77  KNALGFFHIGEIFLNYEKVILQAKEYNHSLKREFCYLFTHGIIHLYGYDHVKENEAKEMN 136

Query: 153 GLERSILEDLGI 164
            +  SI++ L I
Sbjct: 137 AIVESIMQKLNI 148


>gi|167755644|ref|ZP_02427771.1| hypothetical protein CLORAM_01159 [Clostridium ramosum DSM 1402]
 gi|237734392|ref|ZP_04564873.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167704583|gb|EDS19162.1| hypothetical protein CLORAM_01159 [Clostridium ramosum DSM 1402]
 gi|229382622|gb|EEO32713.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 153

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 3/130 (2%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           +++ N  +K   ++E++ ELS +  D  +I  +N EYR ID+ T+V+SF           
Sbjct: 23  RSIINEAAKQLGIEEDL-ELSCILVDDSKIHEINKEYRKIDRATDVISFALEDNEQFYVP 81

Query: 98  SL--MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            +   +GDI ++ +  +++A   G + +  +  L  HG LHLLG+DH+ ++D   M  ++
Sbjct: 82  GMPRSIGDIFISVDHAKVQAEEYGHDLKREMCFLFTHGLLHLLGFDHMIEEDEIQMIAMQ 141

Query: 156 RSILEDLGIN 165
           +SIL+ L I 
Sbjct: 142 KSILDALNIT 151


>gi|121603421|ref|YP_980750.1| hypothetical protein Pnap_0508 [Polaromonas naphthalenivorans CJ2]
 gi|145558831|sp|A1VJK1|RRMF_POLNA RecName: Full=Probable rRNA maturation factor
 gi|120592390|gb|ABM35829.1| protein of unknown function UPF0054 [Polaromonas naphthalenivorans
           CJ2]
          Length = 151

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 7/115 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++    +   + LN +YR  D  TNVL+F    A        +  D+VL   ++  E
Sbjct: 42  AEITVRIVGAEEGQALNRDYRAKDYATNVLTFDYTQAP------YVTADLVLCAPVVAKE 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           A    K  + H  HL++HG LH  GYDH   ++DA  ME LE  IL  LG ++PY
Sbjct: 96  AQDNQKTLQAHYAHLLVHGTLHAQGYDHETGEEDAEEMEALEIEILAGLGFDNPY 150


>gi|317508757|ref|ZP_07966408.1| hypothetical protein HMPREF9336_02780 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252951|gb|EFV12370.1| hypothetical protein HMPREF9336_02780 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 180

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 6/112 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAY 108
            ELS++  D+  +  L+ ++  +  PT+VLSFP   A  DG       +  +LGDIVL  
Sbjct: 35  AELSMLLVDTSTMAHLHQQWMNLPGPTDVLSFPMDDAEPDGRPDAVEAAQTLLGDIVLCP 94

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+   +A   G   E+ L+ L +HG LH+LGYDH + ++   M GL+  ++E
Sbjct: 95  EVAAEQAEAAGHSTEHELIVLTVHGVLHILGYDHAEPEEEAEMFGLQGKLVE 146


>gi|289642692|ref|ZP_06474832.1| protein of unknown function UPF0054 [Frankia symbiont of Datisca
           glomerata]
 gi|289507522|gb|EFD28481.1| protein of unknown function UPF0054 [Frankia symbiont of Datisca
           glomerata]
          Length = 158

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 17/152 (11%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +A E+ +  DE+ L  L   V      N           + ELS++  +   +E L+  Y
Sbjct: 5   VANESGVEADEVTLTALARFVLDTMKVN----------PLAELSVMLVEQAAMEELHVRY 54

Query: 75  RGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            G + PT+VL+FP       +A  S +   +L+LGDIVL  E+   +A   G   E+ + 
Sbjct: 55  MGEEGPTDVLAFPQDDAFDPSAPDSGEDDPTLLLGDIVLCPEVARRQAAKAGHSTEHEMH 114

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            L  HG LHLLGYDH +  +   M  ++  +L
Sbjct: 115 LLCTHGILHLLGYDHAEPDEEREMWAVQSRLL 146


>gi|315636838|ref|ZP_07892063.1| metalloprotease [Arcobacter butzleri JV22]
 gi|315478892|gb|EFU69600.1| metalloprotease [Arcobacter butzleri JV22]
          Length = 140

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+   +  I+ LN EYR IDKPT+VLSFP  F   D     +LG IV++ + ++ +A
Sbjct: 28  DIELIVVKNDEIQELNKEYRNIDKPTDVLSFPMNFEVIDMP---LLGSIVISTDFVQEKA 84

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
                 F      L IHG LHLLG+DH
Sbjct: 85  KEFKHSFNEEFTLLFIHGLLHLLGFDH 111


>gi|260436620|ref|ZP_05790590.1| putative metalloprotease [Synechococcus sp. WH 8109]
 gi|260414494|gb|EEX07790.1| putative metalloprotease [Synechococcus sp. WH 8109]
          Length = 172

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 2/109 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIE 112
           + L L FTD   I  LN  +R    PT+VLSF     + D     S+ LGDIV++ E   
Sbjct: 57  LSLGLRFTDDAAIADLNSAWRQKTGPTDVLSFAALDDAGDWMEGPSIELGDIVVSLETAR 116

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +A   G      L  L+ HG LHLLG+DH D+     M  L+  +L D
Sbjct: 117 RQAQEQGHSLNRELRWLVSHGLLHLLGWDHPDEDSLAAMLALQERLLGD 165


>gi|157737127|ref|YP_001489810.1| putative metalloprotease [Arcobacter butzleri RM4018]
 gi|167016839|sp|A8ET67|RRMF_ARCB4 RecName: Full=Probable rRNA maturation factor
 gi|157698981|gb|ABV67141.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
          Length = 140

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+   +  I+ LN EYR IDKPT+VLSFP  F   D     +LG IV++ + ++ +A
Sbjct: 28  DIELIVVKNDEIQELNKEYRNIDKPTDVLSFPMNFEVIDMP---LLGSIVISTDFVQEKA 84

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
                 F      L IHG LHLLG+DH
Sbjct: 85  KEFKHSFNEEFTLLFIHGLLHLLGFDH 111


>gi|312144004|ref|YP_003995450.1| protein of unknown function UPF0054 [Halanaerobium sp.
           'sapolanicus']
 gi|311904655|gb|ADQ15096.1| protein of unknown function UPF0054 [Halanaerobium sp.
           'sapolanicus']
          Length = 143

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 8/110 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+ F  +  I+ LN +YR ID  T+VLSFP            +LGDI+++ E    +A
Sbjct: 40  EVSVAFVSNEEIKKLNKKYRNIDAATDVLSFP--------IDDEVLGDIIISSERAVSQA 91

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G   +  L +L +HG LHL GYDH   ++   M   E  IL +L ++
Sbjct: 92  EEYGHSLKRELAYLTVHGILHLFGYDHHGQEEKNKMRQKEERILTELDLS 141


>gi|119960557|ref|YP_947971.1| metalloprotease [Arthrobacter aurescens TC1]
 gi|166227688|sp|A1R6V9|RRMF_ARTAT RecName: Full=Probable rRNA maturation factor
 gi|119947416|gb|ABM06327.1| putative uncharacterized protein family UPF0054 [Arthrobacter
           aurescens TC1]
          Length = 157

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 19/167 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  L TL   +F +          ++     ELS++  D   +E L
Sbjct: 1   MSIEVNNESGVVVDEAQLVTLSRFIFER---------LYIHPQ-AELSILLVDEPAMEKL 50

Query: 71  NFEYRGIDKP--TNVLSFP----TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + E   +D+P  T+VLS P    T           MLGDI +  ++ E++A   G   ++
Sbjct: 51  HIEL--MDEPGATDVLSVPMDELTPGTPEKPTPQGMLGDIAICPQVAEVQARNAGHPTQD 108

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
            ++ L  HG LHLLG+DH + ++   M GL+R +L + LG + P E 
Sbjct: 109 EMLLLTTHGILHLLGFDHAEPEEKEEMFGLQRELLSEFLGKDAPMET 155


>gi|257471496|ref|ZP_05635495.1| hypothetical protein BaphL_02205 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|311086173|gb|ADP66255.1| hypothetical protein CWO_02330 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086746|gb|ADP66827.1| hypothetical protein CWQ_02365 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087334|gb|ADP67414.1| hypothetical protein CWS_02310 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087838|gb|ADP67917.1| hypothetical protein CWU_02885 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 88

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +SFP  F      +  +LGD+VL   IIE E+    K  E+H  H+ IHG LHLLGYDH 
Sbjct: 1   MSFP--FNKFIKINYKLLGDLVLCKNIIEKESLKYNKSLESHWAHITIHGTLHLLGYDHQ 58

Query: 144 DDKDACVMEGLERSILEDLGINDPY 168
           ++K+A +ME LE  I+  L    P+
Sbjct: 59  NNKEADIMERLENKIMLSLNYKKPH 83


>gi|307298543|ref|ZP_07578346.1| protein of unknown function UPF0054 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915708|gb|EFN46092.1| protein of unknown function UPF0054 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 142

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 13/108 (12%)

Query: 40  VSNLISKGYFVKENIVE-----LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           +SN++ K   VK  + E     L+L+FTD   I ++N E+R  D+PT+VLSF        
Sbjct: 18  ISNIVEK--VVKAELGERKIGMLNLLFTDDSEIRSINKEFRHRDEPTDVLSFQY------ 69

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           G    ++GDIV++ E I  +A   G  FE  L +++IHG LH+LG+ H
Sbjct: 70  GLEEEIVGDIVISLERISEQAGEFGNSFEEELYYILIHGVLHVLGHTH 117


>gi|116492868|ref|YP_804603.1| metal-dependent hydrolase [Pediococcus pentosaceus ATCC 25745]
 gi|122265668|sp|Q03F61|RRMF_PEDPA RecName: Full=Probable rRNA maturation factor
 gi|116103018|gb|ABJ68161.1| Predicted metal-dependent hydrolase [Pediococcus pentosaceus ATCC
           25745]
          Length = 156

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 8/118 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML--------GDIVL 106
            E+S+    +  I  +N EYR +D+PT+V+SF    A  D      +        GD+++
Sbjct: 37  TEISVTLMHNDEIHQINKEYRNVDRPTDVISFAINDADEDIIMDPEMAEEIPANIGDLMI 96

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           + + +  +A  LG  +E  L  L +HGFLHL GYDH++ +D   M  L++ I+   G+
Sbjct: 97  SVDKVAEQAEFLGHSYERELGFLCVHGFLHLNGYDHMEKEDQEKMFPLQKEIMNAYGL 154


>gi|309775531|ref|ZP_07670531.1| metalloprotease [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916625|gb|EFP62365.1| metalloprotease [Erysipelotrichaceae bacterium 3_1_53]
          Length = 155

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----LGDIVLAYEIIE 112
           S++F     I  +N EYR ID+PT+V+SF  A   S+    +M     LGDI +  E + 
Sbjct: 41  SVIFVTKDAIHEINREYRKIDRPTDVISF--ALKDSEDSYEVMEGGEELGDIFINTEAVV 98

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +A   G      +  L  HG LHLLGYDH+  ++  VM  L+  IL+D+
Sbjct: 99  SQAADYGHTLRREVCFLFTHGLLHLLGYDHMTPEEEAVMFQLQDVILDDI 148


>gi|227890900|ref|ZP_04008705.1| metal-dependent hydrolase [Lactobacillus salivarius ATCC 11741]
 gi|227867309|gb|EEJ74730.1| metal-dependent hydrolase [Lactobacillus salivarius ATCC 11741]
          Length = 159

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 11/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----------LGD 103
            E+S+   ++ +I  +N +YRG+DK T+V+SF       D    ++           +GD
Sbjct: 37  TEMSVTLMNNEQIHEINLKYRGVDKATDVISFAIEEDDPDELPIILPDDVDFEEPKNIGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           ++++ + ++ +A  L    +  L  L +HGFLHL GYDH+  +D  VM  L+R IL+  G
Sbjct: 97  MMISMDKVKEQAEYLDHSEDRELGFLTVHGFLHLNGYDHMKAEDEKVMFKLQRDILDAYG 156

Query: 164 IN 165
           + 
Sbjct: 157 LK 158


>gi|145223294|ref|YP_001133972.1| putative metalloprotease [Mycobacterium gilvum PYR-GCK]
 gi|315443754|ref|YP_004076633.1| hypothetical protein Mspyr1_21440 [Mycobacterium sp. Spyr1]
 gi|189039754|sp|A4T2C0|RRMF_MYCGI RecName: Full=Probable rRNA maturation factor
 gi|145215780|gb|ABP45184.1| protein of unknown function UPF0054 [Mycobacterium gilvum PYR-GCK]
 gi|315262057|gb|ADT98798.1| conserved hypothetical protein TIGR00043 [Mycobacterium sp. Spyr1]
          Length = 178

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           S L+S   FV   +      ELS+V  D+  +  L+  +  +  PT+V+SFP       G
Sbjct: 16  SELVSVARFVIRKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGG 75

Query: 96  ------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                     MLGDIVL  E    +A   G      L  L +HG LHLLGYDH +  +  
Sbjct: 76  RPDTPEPGPSMLGDIVLCPEFAAKQAADAGHTLGQELALLTVHGVLHLLGYDHAEPDEEK 135

Query: 150 VMEGLERSILED 161
            M  L+R +LE+
Sbjct: 136 EMFALQRELLEE 147


>gi|300176925|emb|CBK25494.2| unnamed protein product [Blastocystis hominis]
          Length = 166

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVLA 107
           V+L++ +  S +I  LN  YR ID PT++LSFPT        +  S+  +   LGDI +A
Sbjct: 22  VDLTISYITSPQIRELNRVYRNIDSPTDILSFPTHTFITNPGYLPSEKNTIRSLGDIYIA 81

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            + +++       +   H   L  HG  HLLG+DHV D+D   M   E+ +L++
Sbjct: 82  TDYVDLYCKENKIDRFEHFNVLYAHGISHLLGFDHVKDEDYIKMSAFEKKLLKE 135


>gi|221369606|ref|YP_002520702.1| metalloprotease RHOS4_36330 [Rhodobacter sphaeroides KD131]
 gi|221162658|gb|ACM03629.1| metalloprotease RHOS4_36330 [Rhodobacter sphaeroides KD131]
          Length = 160

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 13/125 (10%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-------------GCSSLMLGD 103
           L ++  D  RI  LN  +R   KPTNVLS+P+   +S+                   LGD
Sbjct: 36  LVVMGCDDARIAELNGAFRQKGKPTNVLSWPSEERASEEPGVAPEPPEPGDPEDPEPLGD 95

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + +A+E  + EA   GK   +H+ HL++HG LHLLGYDHV++ D  +ME  E  IL  LG
Sbjct: 96  VAIAFETCQREAAEQGKPVADHVTHLLVHGVLHLLGYDHVEEADGDLMEATETRILAGLG 155

Query: 164 INDPY 168
           + DPY
Sbjct: 156 VPDPY 160


>gi|312140288|ref|YP_004007624.1| hypothetical protein REQ_29270 [Rhodococcus equi 103S]
 gi|325677054|ref|ZP_08156724.1| metalloprotease [Rhodococcus equi ATCC 33707]
 gi|311889627|emb|CBH48944.1| conserved hypothetical protein [Rhodococcus equi 103S]
 gi|325552125|gb|EGD21817.1| metalloprotease [Rhodococcus equi ATCC 33707]
          Length = 180

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 15/133 (11%)

Query: 42  NLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------T 88
           +LIS   FV   +      ELS+V  DS  +  L+  +  +  PT+V+SFP         
Sbjct: 17  DLISVARFVIARMDVHPAAELSMVLVDSSTMADLHMRWMDLPGPTDVMSFPMDELEPGGR 76

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
             A   G S  MLGDIVL       +A   G   ++ L  L +HG LHLLGYDH + ++ 
Sbjct: 77  PDAPEPGPS--MLGDIVLCPSFALEQAEKAGHSLDHELALLTVHGVLHLLGYDHAEPEEE 134

Query: 149 CVMEGLERSILED 161
             M GL+  +L D
Sbjct: 135 KEMFGLQNQLLAD 147


>gi|77465599|ref|YP_355102.1| hypothetical protein RSP_3598 [Rhodobacter sphaeroides 2.4.1]
 gi|126464038|ref|YP_001045151.1| hypothetical protein Rsph17029_3283 [Rhodobacter sphaeroides ATCC
           17029]
 gi|123590065|sp|Q3IW83|RRMF_RHOS4 RecName: Full=Probable rRNA maturation factor
 gi|77390017|gb|ABA81201.1| Protein of unknown function UPF0054 [Rhodobacter sphaeroides 2.4.1]
 gi|126105849|gb|ABN78379.1| protein of unknown function UPF0054 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 167

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 13/125 (10%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-------------GCSSLMLGD 103
           L ++  D  RI  LN  +R   KPTNVLS+P+   +S+                   LGD
Sbjct: 43  LVVMGCDDARIAELNGAFRQKGKPTNVLSWPSEERASEEPGMAPEPPEPGDPEDPEPLGD 102

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + +A+E  + EA   GK   +H+ HL++HG LHLLGYDHV++ D  +ME  E  IL  LG
Sbjct: 103 VAIAFETCQREAAEQGKPVTDHVTHLLVHGVLHLLGYDHVEEADGDLMEATETRILAGLG 162

Query: 164 INDPY 168
           + DPY
Sbjct: 163 VPDPY 167


>gi|332561271|ref|ZP_08415589.1| hypothetical protein RSWS8N_19539 [Rhodobacter sphaeroides WS8N]
 gi|332275069|gb|EGJ20385.1| hypothetical protein RSWS8N_19539 [Rhodobacter sphaeroides WS8N]
          Length = 160

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 13/125 (10%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-------------GCSSLMLGD 103
           L ++  D  RI  LN  +R   KPTNVLS+P+   +S+                   LGD
Sbjct: 36  LVVMGCDDARIAELNGAFRQKGKPTNVLSWPSEERASEEPGVAPEPPEPGDPDDPEPLGD 95

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + +A+E  + EA   GK   +H+ HL++HG LHLLGYDHV++ D  +ME  E  IL  LG
Sbjct: 96  VAIAFETCQREAAEQGKPVTDHVTHLLVHGVLHLLGYDHVEEADGDLMEATETRILAGLG 155

Query: 164 INDPY 168
           + DPY
Sbjct: 156 VPDPY 160


>gi|71065192|ref|YP_263919.1| hypothetical protein Psyc_0626 [Psychrobacter arcticus 273-4]
 gi|123649317|sp|Q4FU23|RRMF_PSYA2 RecName: Full=Probable rRNA maturation factor
 gi|71038177|gb|AAZ18485.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 206

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 3/121 (2%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAY 108
           +E I  L +  TD      LN E R  D  TN+LS+P+   ++      +L LG++V+ +
Sbjct: 85  QEKIKALDIYITDEDEGRELNLEARQKDYATNILSYPSDLPAAIIGLMPTLPLGELVICH 144

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDP 167
            ++  EA    K    H+ HL++HG LHLLG+DH +   +   ME  E  IL  L I +P
Sbjct: 145 AVMVREAAEQNKAAVQHINHLLVHGILHLLGFDHELGQAEQDEMERFEIEILAGLNIPNP 204

Query: 168 Y 168
           Y
Sbjct: 205 Y 205


>gi|297243341|ref|ZP_06927274.1| metal-dependent hydrolase [Gardnerella vaginalis AMD]
 gi|296888588|gb|EFH27327.1| metal-dependent hydrolase [Gardnerella vaginalis AMD]
          Length = 186

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   I  L+  +  ++ PT+V+SFP       S +  S  MLGD+V+   + +
Sbjct: 36  DLSITFVDPEPIACLHERWMNLEGPTDVMSFPMDELTPGSDEKVSEGMLGDLVICPWVAQ 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   ++   M GL+R ++
Sbjct: 96  QQALAAGHSTMEEMLLLTIHGILHLLGYDHTTPEEEKQMFGLQRQLM 142


>gi|229552358|ref|ZP_04441083.1| possible metal-dependent hydrolase [Lactobacillus rhamnosus LMS2-1]
 gi|258539729|ref|YP_003174228.1| metalloprotease [Lactobacillus rhamnosus Lc 705]
 gi|229314340|gb|EEN80313.1| possible metal-dependent hydrolase [Lactobacillus rhamnosus LMS2-1]
 gi|257151405|emb|CAR90377.1| Metalloprotease [Lactobacillus rhamnosus Lc 705]
          Length = 152

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML--------GDI 104
           N  E+S+       I+ +N EYR  D+ T+V+SF    A  DG   L L        GD+
Sbjct: 35  NDTEMSITIVGDDAIQKINREYRDTDRATDVISF----AIEDGEDDLPLMPGMAKNIGDL 90

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +    +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM  L++ IL   G+
Sbjct: 91  FIDPLTVRRHAKEYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVMIPLQKKILTAYGL 150

Query: 165 N 165
            
Sbjct: 151 T 151


>gi|326381614|ref|ZP_08203308.1| metal-binding heat shock protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199861|gb|EGD57041.1| metal-binding heat shock protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 180

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDGCSSLMLGDIVLAY 108
            ELS+   DS  +  L+ ++  +  PT+V+SFP           +D     MLGDIVL  
Sbjct: 35  AELSIQLIDSESMAELHMQWMDLPGPTDVMSFPMDELTPGGRPDADDPGPAMLGDIVLCP 94

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           E    +A      FE+ +  L +HG LHLLG+DH + +D   M GL+  I+
Sbjct: 95  EFAGEQAKSQHHSFEHEIAVLTVHGVLHLLGFDHAEPEDEREMFGLQGQII 145


>gi|311742996|ref|ZP_07716804.1| cupin domain protein [Aeromicrobium marinum DSM 15272]
 gi|311313676|gb|EFQ83585.1| cupin domain protein [Aeromicrobium marinum DSM 15272]
          Length = 158

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            EL+L   D+  I  LN ++ G D PT+VLSFP    T     +      LGDI L  ++
Sbjct: 35  TELTLRLVDADTIAVLNRQWMGKDGPTDVLSFPMDELTPGRDDEESPEGYLGDIALCPQV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            E +A   G    + +  L +HG LHLLGYDH +  +   M GL+  +L
Sbjct: 95  AEQQAPAAGHTTADEVDLLTVHGILHLLGYDHAEPDEHREMFGLQGRLL 143


>gi|199599322|ref|ZP_03212720.1| Predicted metal-dependent hydrolase [Lactobacillus rhamnosus HN001]
 gi|258508548|ref|YP_003171299.1| metalloprotease [Lactobacillus rhamnosus GG]
 gi|199589761|gb|EDY97869.1| Predicted metal-dependent hydrolase [Lactobacillus rhamnosus HN001]
 gi|257148475|emb|CAR87448.1| Metalloprotease [Lactobacillus rhamnosus GG]
 gi|259649855|dbj|BAI42017.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 152

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML--------GDI 104
           N  E+S+       I+ +N EYR  D+ T+V+SF    A  DG   L L        GD+
Sbjct: 35  NDTEMSITIVGDDAIQKINREYRDTDRATDVISF----AIEDGEDDLPLLPGMAKNIGDL 90

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +    +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM  L++ IL   G+
Sbjct: 91  FIDPLTVRRHAKEYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVMIPLQKKILTAYGL 150

Query: 165 N 165
            
Sbjct: 151 T 151


>gi|254411860|ref|ZP_05025636.1| conserved hypothetical protein TIGR00043, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181582|gb|EDX76570.1| conserved hypothetical protein TIGR00043, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 169

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           EL+L  TD   I+ LN ++R  ++PT+VLSF       P          S+ LGD+V++ 
Sbjct: 50  ELTLRLTDDAEIQALNSQFRHKNQPTDVLSFAALEVDSPQIPPDMQAAESVYLGDLVISV 109

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
           E    +A   G      L  L  HG LHLLG+DH D++    M   ++++L+ + +  P
Sbjct: 110 ETAYRQAQHQGHPLSIELAWLATHGLLHLLGWDHPDEESLQRMLNQQQALLQIVNLTLP 168


>gi|86609356|ref|YP_478118.1| hypothetical protein CYB_1900 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123501846|sp|Q2JKD4|RRMF_SYNJB RecName: Full=Probable rRNA maturation factor
 gi|86557898|gb|ABD02855.1| conserved hypothetical protein TIGR00043 [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 163

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----AFASSDGCSSLMLGDIVL 106
           +   ELSL  T    I  LN E+R +D+PT+VL+F        F   D     +LGDIV+
Sbjct: 36  QEPCELSLCLTSDEHIRQLNREFRHLDEPTDVLAFAAQEMLAPFGIQDITGVRLLGDIVI 95

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           +      +A   G      L  L  HG LHLLG+DH D+
Sbjct: 96  SVPTARAQAKAQGHRLSQELAWLASHGLLHLLGWDHPDE 134


>gi|224542132|ref|ZP_03682671.1| hypothetical protein CATMIT_01307 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524969|gb|EEF94074.1| hypothetical protein CATMIT_01307 [Catenibacterium mitsuokai DSM
           15897]
          Length = 155

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 2/115 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--MLGDIVLAYE 109
           E+ VE+S V  D  RI  +N EYR ID+ T+V+SF            +   LGDI ++ +
Sbjct: 36  EDDVEVSCVLVDDERIHEINREYRHIDRSTDVISFAMEDNDQFYVEGMPRTLGDIFISVD 95

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             + +A   G      +  L  HG LHLLGYDH+ D+    M GL+  IL  L I
Sbjct: 96  HAKKQAEEYGHSLRREMCFLFTHGILHLLGYDHMTDEQEKEMFGLQDEILGALSI 150


>gi|283783326|ref|YP_003374080.1| metalloprotein, YbeY family [Gardnerella vaginalis 409-05]
 gi|283441013|gb|ADB13479.1| metalloprotein, YbeY family [Gardnerella vaginalis 409-05]
          Length = 186

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   I  L+  +  ++ PT+V+SFP       S +  S  MLGD+V+   + +
Sbjct: 36  DLSITFVDPEPIACLHERWMNLEGPTDVMSFPMDELTPGSDEKVSEGMLGDLVICPWVAQ 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   ++   M GL+R ++
Sbjct: 96  QQALAAGHSTMEEMLLLTIHGILHLLGYDHTTPEEEKQMFGLQRQLM 142


>gi|210623872|ref|ZP_03294107.1| hypothetical protein CLOHIR_02058 [Clostridium hiranonis DSM 13275]
 gi|210153298|gb|EEA84304.1| hypothetical protein CLOHIR_02058 [Clostridium hiranonis DSM 13275]
          Length = 153

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS--SLMLGDIVLAYEIIEI 113
           ++S+ F D+  I  LN ++RG+D+ T+VLSFP      +      + LGDIV++ E    
Sbjct: 40  DISISFVDNKEIHELNKQFRGVDRATDVLSFPMLSDEFEDVEYEEMSLGDIVVSLERALE 99

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++   G  FE  +  L+ H   HLLGYDH  D++   M   E ++L  L I 
Sbjct: 100 QSIEYGHSFEREVCFLVCHSMFHLLGYDHDTDENTREMREKEEAVLTKLNIT 151


>gi|167767292|ref|ZP_02439345.1| hypothetical protein CLOSS21_01811 [Clostridium sp. SS2/1]
 gi|167711267|gb|EDS21846.1| hypothetical protein CLOSS21_01811 [Clostridium sp. SS2/1]
 gi|291559398|emb|CBL38198.1| conserved hypothetical protein TIGR00043 [butyrate-producing
           bacterium SSC/2]
          Length = 170

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 15/119 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---------------FASSDGCSSLM 100
           E++L+ T++  I  +N E R ID+PT+VLSFP A                A        +
Sbjct: 39  EVNLMLTNNETIHAINKEQREIDRPTDVLSFPMAEYEEPADFSKIEEDPMAFDPESGEFL 98

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           LGDIV++ + +  +A   G   E     LI H  LHL GYDH+++++   ME  +  IL
Sbjct: 99  LGDIVISMDKVWEQAENYGHSREREYAFLIAHSMLHLFGYDHMEEEERKDMEKRQEEIL 157


>gi|255656420|ref|ZP_05401829.1| hypothetical protein CdifQCD-2_12149 [Clostridium difficile
           QCD-23m63]
 gi|296450133|ref|ZP_06891894.1| metal-dependent hydrolase [Clostridium difficile NAP08]
 gi|296878514|ref|ZP_06902519.1| metal-dependent hydrolase [Clostridium difficile NAP07]
 gi|296260896|gb|EFH07730.1| metal-dependent hydrolase [Clostridium difficile NAP08]
 gi|296430321|gb|EFH16163.1| metal-dependent hydrolase [Clostridium difficile NAP07]
          Length = 153

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLAYEII 111
           E+SL F D+  I  LN EYRG+D+ T+VLSFP    S D          LGDIV++ E  
Sbjct: 40  EVSLSFVDNKEIHELNREYRGVDRVTDVLSFP--LLSDDFEDVELEEESLGDIVVSLERA 97

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             ++      FE  +  LI H   HLLGYDH  D++   M   E  IL  L I
Sbjct: 98  LEQSIEYNHSFEREVCFLICHSMFHLLGYDHDTDENTKEMREKEEHILNKLNI 150


>gi|294790830|ref|ZP_06755988.1| putative metalloprotease [Scardovia inopinata F0304]
 gi|294458727|gb|EFG27080.1| putative metalloprotease [Scardovia inopinata F0304]
          Length = 174

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   +  L+  + G++ PT+V+SFP         D     +LGDI+L  ++  
Sbjct: 36  DLSIAFIDPQPMAELHVRWMGLEGPTDVMSFPMDQLRPGDEDNRPEGLLGDIILCPQVAS 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           ++A   G      ++ L IHG LHLLGYDH    +   M  L+R +L
Sbjct: 96  MQAAAAGHSTIEEMMLLTIHGVLHLLGYDHKKPDEEKRMFALQRQLL 142


>gi|148240663|ref|YP_001226050.1| metal-dependent hydrolase [Synechococcus sp. WH 7803]
 gi|147849202|emb|CAK24753.1| Predicted metal-dependent hydrolase [Synechococcus sp. WH 7803]
          Length = 200

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 4/108 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAYEII 111
           + L L FT    I  LN  +RG+ +PT+VLSF  A  S       ++L LGDIV++    
Sbjct: 70  ISLGLQFTGDQEIAELNGRWRGLPQPTDVLSF-AALESEMPLQQTTTLELGDIVVSVPTA 128

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             +A   G   E  L  L+ HG LHLLG+DH D+     M   +  +L
Sbjct: 129 ARQALEQGHSLERELQWLVSHGLLHLLGWDHPDEPTLNAMIACQERLL 176


>gi|313672928|ref|YP_004051039.1| hypothetical protein Calni_0965 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939684|gb|ADR18876.1| protein of unknown function UPF0054 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 149

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 10/106 (9%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG--CSSLMLGDIVLAYEI 110
           N  E+SLV TD   ++ +N  YR ID  T+VLSFP     +DG    S +LGDIV++Y+ 
Sbjct: 38  NTAEISLVITDDEEMKEINRLYRKIDSTTDVLSFPI----NDGKDIKSNILGDIVISYDK 93

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDH----VDDKDACVME 152
            + ++       E  +  L IHG LHLLGYDH    VD+K+   M+
Sbjct: 94  AKSQSVENECTIEEEIAFLFIHGLLHLLGYDHDSSEVDEKEMFEMQ 139


>gi|171743045|ref|ZP_02918852.1| hypothetical protein BIFDEN_02170 [Bifidobacterium dentium ATCC
           27678]
 gi|283455944|ref|YP_003360508.1| hypothetical protein BDP_1043 [Bifidobacterium dentium Bd1]
 gi|171278659|gb|EDT46320.1| hypothetical protein BIFDEN_02170 [Bifidobacterium dentium ATCC
           27678]
 gi|283102578|gb|ADB09684.1| Conserved hypothetical protein [Bifidobacterium dentium Bd1]
          Length = 181

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 11/133 (8%)

Query: 35  VFAKAVSNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
           V  K  SNL   G +V + +      +L+++F D   I  L+  +  ++ PT+V+SFP  
Sbjct: 13  VDGKVFSNL---GVWVMDQMRVSTQSDLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMD 69

Query: 89  AFASSDGCSSL--MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                DG + +  +LGDIV+   +   +A   G      ++ L IHG LHLLGYDHV  +
Sbjct: 70  ELRPGDGRTVMEGVLGDIVICPWVAAQQALAAGHSTMEEMMLLTIHGILHLLGYDHVTPE 129

Query: 147 DACVMEGLERSIL 159
               M GL+R +L
Sbjct: 130 QERQMFGLQRQLL 142


>gi|298252735|ref|ZP_06976529.1| metal-dependent hydrolase [Gardnerella vaginalis 5-1]
 gi|297533099|gb|EFH71983.1| metal-dependent hydrolase [Gardnerella vaginalis 5-1]
          Length = 188

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   I  L+  +  ++ PT+V+SFP       S +  S  MLGD+V+   + +
Sbjct: 36  DLSITFVDPEPIACLHERWMNLEGPTDVMSFPMDELTPGSDEKVSEGMLGDLVICPWVAQ 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   ++   M GL+R ++
Sbjct: 96  QQALAAGHSTMEEMLLLTIHGILHLLGYDHTTPEEEKQMFGLQRQLM 142


>gi|169351077|ref|ZP_02868015.1| hypothetical protein CLOSPI_01856 [Clostridium spiroforme DSM 1552]
 gi|169292139|gb|EDS74272.1| hypothetical protein CLOSPI_01856 [Clostridium spiroforme DSM 1552]
          Length = 152

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM--LGDIVLAYEIIE 112
           +ELS +  D  +I  +N EYR ID+ T+V+SF    +       +   +GDI ++ +   
Sbjct: 39  LELSCILVDDQKIHEINKEYRNIDRATDVISFALEDSEQYYVEGMARNIGDIFISVDHAL 98

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++AN  G   +  +  L  HG LHLLG+DH++ +D   M  +++ IL  L I
Sbjct: 99  MQANEYGHSLKREMCFLFTHGLLHLLGFDHMEKEDEEKMIAMQKKILNALKI 150


>gi|126700056|ref|YP_001088953.1| hypothetical protein CD2440 [Clostridium difficile 630]
 gi|254976033|ref|ZP_05272505.1| hypothetical protein CdifQC_11999 [Clostridium difficile QCD-66c26]
 gi|255093421|ref|ZP_05322899.1| hypothetical protein CdifC_12284 [Clostridium difficile CIP 107932]
 gi|255101599|ref|ZP_05330576.1| hypothetical protein CdifQCD-6_12369 [Clostridium difficile
           QCD-63q42]
 gi|255307468|ref|ZP_05351639.1| hypothetical protein CdifA_12817 [Clostridium difficile ATCC 43255]
 gi|255315166|ref|ZP_05356749.1| hypothetical protein CdifQCD-7_12477 [Clostridium difficile
           QCD-76w55]
 gi|255517835|ref|ZP_05385511.1| hypothetical protein CdifQCD-_12036 [Clostridium difficile
           QCD-97b34]
 gi|255650951|ref|ZP_05397853.1| hypothetical protein CdifQCD_12241 [Clostridium difficile
           QCD-37x79]
 gi|260684020|ref|YP_003215305.1| hypothetical protein CD196_2285 [Clostridium difficile CD196]
 gi|260687680|ref|YP_003218814.1| hypothetical protein CDR20291_2332 [Clostridium difficile R20291]
 gi|306520831|ref|ZP_07407178.1| hypothetical protein CdifQ_14166 [Clostridium difficile QCD-32g58]
 gi|123362995|sp|Q182C6|RRMF_CLOD6 RecName: Full=Probable rRNA maturation factor
 gi|115251493|emb|CAJ69326.1| putative metal-dependent hydrolase [Clostridium difficile]
 gi|260210183|emb|CBA64380.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260213697|emb|CBE05571.1| conserved hypothetical protein [Clostridium difficile R20291]
          Length = 153

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLAYEII 111
           E+SL F D+  I  LN EYRG+D+ T+VLSFP    S D          LGDIV++ E  
Sbjct: 40  EVSLSFVDNKEIHELNREYRGVDRVTDVLSFP--LLSDDFEDVELEEESLGDIVVSLERA 97

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             ++      FE  +  LI H   HLLGYDH  D++   M   E  IL  L I
Sbjct: 98  LEQSIEYNHSFEREVCFLICHSMFHLLGYDHDTDENTKEMREKEEHILNKLNI 150


>gi|322383672|ref|ZP_08057423.1| metalloprotease-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321151884|gb|EFX44827.1| metalloprotease-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 170

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 19/128 (14%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD------------GCSSLM--- 100
           E++L F ++  I  LN +YRGID+PT+VLSF       D            G  +++   
Sbjct: 41  EVTLTFVNNDMIHELNRQYRGIDRPTDVLSFAMQEMGEDELIISYGELDEDGIEAVLEDK 100

Query: 101 ----LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LGDI+++      +A   G  FE  L  L +HGFLHL+GYDH  + +   M   + 
Sbjct: 101 IVEPLGDIIISIPKTIEQAEEYGHSFERELGFLFVHGFLHLVGYDHQTEDEEKKMFAKQE 160

Query: 157 SILEDLGI 164
            IL   G+
Sbjct: 161 LILSQAGL 168


>gi|322378540|ref|ZP_08052988.1| putative metalloprotease [Helicobacter suis HS1]
 gi|322379746|ref|ZP_08054056.1| putative metalloprotease [Helicobacter suis HS5]
 gi|321147817|gb|EFX42407.1| putative metalloprotease [Helicobacter suis HS5]
 gi|321149054|gb|EFX43506.1| putative metalloprotease [Helicobacter suis HS1]
          Length = 157

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 7/99 (7%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLA 107
           Y   + +VEL LV  D  ++  LN E+RG+DK T+VLSFP            +LG +V+ 
Sbjct: 39  YLNIQGLVELLLV--DVEKMRELNLEFRGLDKSTDVLSFPLEIPGQK-----LLGSVVIN 91

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
            E+  IEA   G      +  L +HG LHLLG+DH  D+
Sbjct: 92  VELATIEAKQRGHSLFAEITLLFVHGCLHLLGFDHEKDR 130


>gi|19553485|ref|NP_601487.1| putative metalloprotease [Corynebacterium glutamicum ATCC 13032]
 gi|62391128|ref|YP_226530.1| metalloprotease [Corynebacterium glutamicum ATCC 13032]
 gi|26006926|sp|Q8NNB7|RRMF_CORGL RecName: Full=Probable rRNA maturation factor
 gi|21325058|dbj|BAB99680.1| Predicted metal-dependent hydrolase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326467|emb|CAF20629.1| Predicted metal-dependent hydrolase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 196

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSS--LMLGDIVLA 107
            E S+   D   I  L+ ++  ++ PT+V+SFP       ++  DG +    MLGDIVL 
Sbjct: 36  AEASIHIVDVDTIADLHVKWLDLEGPTDVMSFPMDELTPGYSRPDGATPGPAMLGDIVLC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            E    +A   G +  + L  L +HG LHLLGYDHVD  +   M  L+  +L D
Sbjct: 96  PEFAAKQATKAGHDLAHELALLTVHGSLHLLGYDHVDPAEEREMFALQNELLAD 149


>gi|54023400|ref|YP_117642.1| putative metalloprotease [Nocardia farcinica IFM 10152]
 gi|59799084|sp|Q5YZW3|RRMF_NOCFA RecName: Full=Probable rRNA maturation factor
 gi|54014908|dbj|BAD56278.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 184

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 11/131 (8%)

Query: 42  NLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AF 90
           +L+S   FV   +      ELS+V  D   +  L+  +  +  PT+V+SFP         
Sbjct: 17  DLVSVARFVIGRMDVHPAAELSMVLVDLDTMADLHMRWMDLPGPTDVMSFPMDELEPGGR 76

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
             S      MLGDIVL  E    +A+  G   E+ L  L +HG LHLLGYDH + ++   
Sbjct: 77  PDSPEPGPSMLGDIVLCPEFAADQAHKAGHSLEHELALLTVHGVLHLLGYDHAEPEEEKE 136

Query: 151 MEGLERSILED 161
           M  L+  +LE+
Sbjct: 137 MFALQARLLEE 147


>gi|21672692|ref|NP_660759.1| hypothetical protein BUsg427 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|21623332|gb|AAM67970.1| hypothetical 17.5 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 105

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           ++ +N +YRG +K TN+LSF   F      +  +LGD+VL  +IIE E+    K  E+  
Sbjct: 1   MKNINLKYRGKNKSTNILSFK--FDLFINKNQTLLGDLVLCKKIIEKESLKYQKTLESRW 58

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H+IIHG LHLLGYDH + K+  +ME +E  I+  L    PY
Sbjct: 59  AHMIIHGTLHLLGYDHKNKKEKKIMEKIENKIMLFLNYEKPY 100


>gi|218282278|ref|ZP_03488577.1| hypothetical protein EUBIFOR_01159 [Eubacterium biforme DSM 3989]
 gi|218216746|gb|EEC90284.1| hypothetical protein EUBIFOR_01159 [Eubacterium biforme DSM 3989]
          Length = 151

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 5/132 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVE--LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           + K   N++ +   V E   +  LS+++    +I  +N +YR +D+ T+V+SF      S
Sbjct: 17  YKKDFENILERACQVLERKGDWSLSVIYVTPEQIHEINRDYRNVDRATDVISFAIQDDMS 76

Query: 94  DGC---SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           D         LGDI +  + I  +A+  G         L  HG LHL+GYDH+ ++D  V
Sbjct: 77  DMLVDEDQYELGDIFINVQAIRDQASAYGHSIRREACFLFCHGLLHLMGYDHMKEEDEKV 136

Query: 151 MEGLERSILEDL 162
           M  L+  IL++L
Sbjct: 137 MFALQDEILDEL 148


>gi|289423899|ref|ZP_06425692.1| putative metalloprotease [Peptostreptococcus anaerobius 653-L]
 gi|289155676|gb|EFD04348.1| putative metalloprotease [Peptostreptococcus anaerobius 653-L]
          Length = 158

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 6/113 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEII 111
           E+SL F D+  I  LN E+R ID+ T+VLSFP      F       SL  GDIV++ +  
Sbjct: 40  EVSLSFVDNEEIRNLNREFRNIDRVTDVLSFPMLSDDEFDIEYEVESL--GDIVISIQRA 97

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           + +A       E  +  L+ H   HLLGYDH+++++A  M   E  +L  L I
Sbjct: 98  DEQAEEFDHSLEREICFLVCHSMFHLLGYDHMEEEEAKDMHRREEEVLNGLDI 150


>gi|306822850|ref|ZP_07456226.1| probable metalloprotease [Bifidobacterium dentium ATCC 27679]
 gi|309801136|ref|ZP_07695265.1| translation metalloprotein YbeY [Bifidobacterium dentium
           JCVIHMP022]
 gi|304553482|gb|EFM41393.1| probable metalloprotease [Bifidobacterium dentium ATCC 27679]
 gi|308222025|gb|EFO78308.1| translation metalloprotein YbeY [Bifidobacterium dentium
           JCVIHMP022]
          Length = 181

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL--MLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP       DG + +  +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGRTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|293400676|ref|ZP_06644821.1| putative metalloprotease [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305702|gb|EFE46946.1| putative metalloprotease [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 162

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 7/108 (6%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----LGDIVLAYEIIE 112
           S++F D   I  +N EYR ID+PT+V+SF  A    +    +M     LGDI +  + + 
Sbjct: 48  SIIFVDPAMIHEINREYRHIDRPTDVISF--ALKDEEDTYEMMEGLDELGDIFINVQAVV 105

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            +A   G      +  L  HG LHLLGYDH++  D  +M  L+  IL+
Sbjct: 106 DQAAEYGHSLRREVCFLFTHGLLHLLGYDHMEKDDEKIMFALQDVILD 153


>gi|154483546|ref|ZP_02025994.1| hypothetical protein EUBVEN_01250 [Eubacterium ventriosum ATCC
           27560]
 gi|149735456|gb|EDM51342.1| hypothetical protein EUBVEN_01250 [Eubacterium ventriosum ATCC
           27560]
          Length = 166

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 15/124 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---------AFASSD------GCSSLM 100
           E+++   D++ I  +N E R ID+PT+VLSFP          + A  D          L+
Sbjct: 39  EVNVTIVDNNTIHEINREQRKIDRPTDVLSFPMLDYEVAGDFSMAEDDISNFNPDSGELI 98

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDIV++Y+ +  +A       +  L  L+ H  LHL G+DH+ D +   ME  +  IL 
Sbjct: 99  LGDIVISYDKVIEQAAEYNHSRKRELAFLVAHSMLHLFGFDHMVDDERIEMEEKQNIILN 158

Query: 161 DLGI 164
           +LGI
Sbjct: 159 NLGI 162


>gi|220928028|ref|YP_002504937.1| hypothetical protein Ccel_0576 [Clostridium cellulolyticum H10]
 gi|219998356|gb|ACL74957.1| protein of unknown function UPF0054 [Clostridium cellulolyticum
           H10]
          Length = 161

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 11/120 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDG-----CSSLMLGDI 104
           E++++  D   I  +N E+R  DK T+VLSFP          S +G        L+LGDI
Sbjct: 39  EVNVLIVDDEEIRGINKEHRDTDKSTDVLSFPMVNFKDGKLISDEGDYDLEMGELILGDI 98

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E  + +A   G  FE  +  L  H   HLLGYDH++  +  +M   +  IL ++G+
Sbjct: 99  IISAETAQRQAEAYGHSFEREMAFLTAHSCFHLLGYDHMEKNEEEIMFKKQEDILIEIGL 158


>gi|307155325|ref|YP_003890709.1| hypothetical protein Cyan7822_5562 [Cyanothece sp. PCC 7822]
 gi|306985553|gb|ADN17434.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 7822]
          Length = 181

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 14/119 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------GCSSLMLGDIV 105
           ELSL  TD   I+  N +YR  ++PT+VL    AFA+ +              L LGDI+
Sbjct: 63  ELSLRLTDDQEIQYYNAQYRHKNQPTDVL----AFAALEVEVPYQIDEFSDEPLYLGDII 118

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++ E    +A   G      L +L  HGFLHLLG+DH DD+    M   +  +L  L +
Sbjct: 119 ISVETASRQATEQGHSLTRELANLAAHGFLHLLGWDHPDDESLMAMLSQQEILLNHLPL 177


>gi|229824092|ref|ZP_04450161.1| hypothetical protein GCWU000282_01396 [Catonella morbi ATCC 51271]
 gi|229786446|gb|EEP22560.1| hypothetical protein GCWU000282_01396 [Catonella morbi ATCC 51271]
          Length = 176

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 28/139 (20%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-------------------- 94
           +EL L    +  I+ LN +YRG+DKPT+VLSF     SS+                    
Sbjct: 37  IELDLSIVSNEEIQALNRDYRGLDKPTDVLSFALTEVSSEYDVDFAHLDLAEEAEETEDL 96

Query: 95  --------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                         LGDI+++Y   + +A   G   +  L  L +HGFLHL GYDH  ++
Sbjct: 97  EETEFEEEEAIPQHLGDIIISYPRAQEQAQDYGHSLDRELAFLAVHGFLHLNGYDHQTEE 156

Query: 147 DACVMEGLERSILEDLGIN 165
           +A  M  ++  +L   G+ 
Sbjct: 157 EAQEMFRIQEEVLTTYGLT 175


>gi|145595964|ref|YP_001160261.1| putative metalloprotease [Salinispora tropica CNB-440]
 gi|189040145|sp|A4XAD4|RRMF_SALTO RecName: Full=Probable rRNA maturation factor
 gi|145305301|gb|ABP55883.1| protein of unknown function UPF0054 [Salinispora tropica CNB-440]
          Length = 157

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 9/116 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGD 103
            + ELS++  D   +  LN  + G D PT+VL+FP    S D         G    +LGD
Sbjct: 33  QLAELSVLLVDIDYMAELNHRWMGGDGPTDVLAFPMDEGSVDHGPGENAAAGAEPALLGD 92

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           IVL  E+   +A   G    + L  L +HG LHLLGYDH + ++   M  L+  +L
Sbjct: 93  IVLCPEVAAKQAVTAGHSTADELHLLTVHGVLHLLGYDHAEPEEEREMFALQARLL 148


>gi|50955089|ref|YP_062377.1| putative metalloprotease [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|59799105|sp|Q6AEC4|RRMF_LEIXX RecName: Full=Probable rRNA maturation factor
 gi|50951571|gb|AAT89272.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 153

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEI 110
            EL+++  D   +E L+ ++     PT+VLSFP          +   + +LGD+VL  ++
Sbjct: 35  AELAILLVDEAAMEQLHVQWMDEPGPTDVLSFPMDELRPGTEDEPSPAGLLGDVVLCPQV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +++A   G    + L+ L+ HG LHLLG+DH +  +   M G++R IL
Sbjct: 95  AQVQAETTGHTLMDELLLLMTHGILHLLGFDHAEPAEEREMFGIQRDIL 143


>gi|159039362|ref|YP_001538615.1| putative metalloprotease [Salinispora arenicola CNS-205]
 gi|157918197|gb|ABV99624.1| protein of unknown function UPF0054 [Salinispora arenicola CNS-205]
          Length = 170

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGD 103
            + ELS++  D   +  LN  + G D PT+VL+FP    S D         G    +LGD
Sbjct: 46  QLAELSVLLVDIDYMAELNHRWMGGDGPTDVLAFPMDEGSVDHGPGESAVAGTEPALLGD 105

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           IVL  E+   +A   G    + L  L +HG LHLLGYDH +  +   M  L+  +L
Sbjct: 106 IVLCPEVAAKQAATAGHSAADELHLLTVHGVLHLLGYDHAEPDEEREMFALQARLL 161


>gi|304385069|ref|ZP_07367415.1| metal-dependent hydrolase [Pediococcus acidilactici DSM 20284]
 gi|304329263|gb|EFL96483.1| metal-dependent hydrolase [Pediococcus acidilactici DSM 20284]
          Length = 157

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 9/127 (7%)

Query: 47  GYFVKENI-VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML---- 101
           G ++K ++  E+S+    +  I+ +N EYR +D+PT+V+SF       D      +    
Sbjct: 29  GNYLKLDVATEISVTLMHNDEIQKINREYRNVDRPTDVISFAINDEDEDIIMDPEMAEEI 88

Query: 102 ----GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
               GD++++ + +  +A  LG  +E  L  L +HGFLHL GYDH+  +D   M  L++ 
Sbjct: 89  PDNIGDLMISVDKVAEQAEFLGHSYERELGFLCVHGFLHLNGYDHMKKEDQEKMFPLQKE 148

Query: 158 ILEDLGI 164
           I+   G+
Sbjct: 149 IMSAYGL 155


>gi|229916329|ref|YP_002884975.1| hypothetical protein EAT1b_0598 [Exiguobacterium sp. AT1b]
 gi|259647091|sp|C4L408|RRMF_EXISA RecName: Full=Probable rRNA maturation factor
 gi|229467758|gb|ACQ69530.1| protein of unknown function UPF0054 [Exiguobacterium sp. AT1b]
          Length = 158

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 12/145 (8%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE  L T  ++   +++    ++   V+E   ELS+ +  +  I  +N E+RG D PT+V
Sbjct: 7   DEHELLTTSQIELVESILQHAAQLEGVEEP-SELSVTYLTNAEIHEVNREWRGKDAPTDV 65

Query: 84  LSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           +SF  AF            D     +LGD+V++ E    +A   G  FE  L  L IHGF
Sbjct: 66  ISF--AFDEMGDEEMDFMLDEDEPHLLGDLVISVERCREQAADYGHSFERELGFLAIHGF 123

Query: 135 LHLLGYDHVDDKDACVMEGLERSIL 159
           LHLLGYDH+  ++   M   +  +L
Sbjct: 124 LHLLGYDHMTPEEEAEMTARQEEVL 148


>gi|302338950|ref|YP_003804156.1| protein of unknown function UPF0054 [Spirochaeta smaragdinae DSM
           11293]
 gi|301636135|gb|ADK81562.1| protein of unknown function UPF0054 [Spirochaeta smaragdinae DSM
           11293]
          Length = 153

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 8/111 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDGCSSLMLGDIVLAYE 109
           ELS++F +   +  LN  +RGID PT+VLSF           S DG  S+  GDIV++ +
Sbjct: 37  ELSILFCNDDTMRDLNRTWRGIDAPTDVLSFSQLEEENVVSGSEDG--SVYAGDIVISLD 94

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            +++ + +     E  L  L+IHG LHL GYDH  ++ +  M  L+  I++
Sbjct: 95  TLDLHSKLFSVAREEELKRLLIHGILHLAGYDHETNEGSEPMLTLQEEIVK 145


>gi|270291319|ref|ZP_06197541.1| metalloprotease [Pediococcus acidilactici 7_4]
 gi|270280165|gb|EFA26001.1| metalloprotease [Pediococcus acidilactici 7_4]
          Length = 156

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 9/127 (7%)

Query: 47  GYFVKENI-VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML---- 101
           G ++K ++  E+S+    +  I+ +N EYR +D+PT+V+SF       D      +    
Sbjct: 28  GNYLKLDVATEISVTLMHNDEIQKINREYRNVDRPTDVISFAINDEDEDIIMDPEMAEEI 87

Query: 102 ----GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
               GD++++ + +  +A  LG  +E  L  L +HGFLHL GYDH+  +D   M  L++ 
Sbjct: 88  PDNIGDLMISVDKVAEQAEFLGHSYERELGFLCVHGFLHLNGYDHMKKEDQEKMFPLQKE 147

Query: 158 ILEDLGI 164
           I+   G+
Sbjct: 148 IMSAYGL 154


>gi|189040309|sp|A8M0W3|RRMF_SALAI RecName: Full=Probable rRNA maturation factor
          Length = 157

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGD 103
            + ELS++  D   +  LN  + G D PT+VL+FP    S D         G    +LGD
Sbjct: 33  QLAELSVLLVDIDYMAELNHRWMGGDGPTDVLAFPMDEGSVDHGPGESAVAGTEPALLGD 92

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           IVL  E+   +A   G    + L  L +HG LHLLGYDH +  +   M  L+  +L
Sbjct: 93  IVLCPEVAAKQAATAGHSAADELHLLTVHGVLHLLGYDHAEPDEEREMFALQARLL 148


>gi|145296242|ref|YP_001139063.1| putative metalloprotease [Corynebacterium glutamicum R]
 gi|166227674|sp|A4QFZ5|RRMF_CORGB RecName: Full=Probable rRNA maturation factor
 gi|140846162|dbj|BAF55161.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 196

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSS--LMLGDIVLA 107
            E S+   D   I  L+ ++  ++ PT+V+SFP       ++  DG +    MLGDIVL 
Sbjct: 36  AEASIHIVDLDTIADLHVKWLDLEGPTDVMSFPMDELTPGYSRPDGATPGPAMLGDIVLC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            E    +A   G +  + L  L +HG LHLLGYDHVD  +   M  L+  +L D
Sbjct: 96  PEFAAKQATKAGHDLAHELALLTVHGSLHLLGYDHVDPAEEREMFALQNELLAD 149


>gi|167465835|ref|ZP_02330924.1| hypothetical protein Plarl_25263 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 150

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 19/128 (14%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD------------GCSSLM--- 100
           E++L F ++  I  LN +YRGID+PT+VLSF       D            G  +++   
Sbjct: 21  EVTLTFVNNDMIHELNRQYRGIDRPTDVLSFAMQEMGEDELIISYGELDEDGIEAVLEDK 80

Query: 101 ----LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LGDI+++      +A   G  FE  L  L +HGFLHL+GYDH  + +   M   + 
Sbjct: 81  IVEPLGDIIISIPKTIEQAEEYGHSFERELGFLFVHGFLHLVGYDHQTEDEEKKMFAKQE 140

Query: 157 SILEDLGI 164
            IL   G+
Sbjct: 141 LILSQAGL 148


>gi|160933318|ref|ZP_02080706.1| hypothetical protein CLOLEP_02163 [Clostridium leptum DSM 753]
 gi|156867195|gb|EDO60567.1| hypothetical protein CLOLEP_02163 [Clostridium leptum DSM 753]
          Length = 169

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 4/117 (3%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----FASSDGCSSLMLGDIVLA 107
           +   E+S+ F ++ +I  LN  +R +D PT+VLSFP      +      ++ +LGDIV++
Sbjct: 40  QGAAEVSVTFANNEQIHELNKMHRNVDAPTDVLSFPMGEDGKYDIDPATNAKILGDIVIS 99

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            E    +A   G   +  + +L  H  LHLLGYDH +  +   M   E  ++  LG+
Sbjct: 100 MEKAVEQAERFGHTLQREVGYLTAHSMLHLLGYDHEEPLEKVHMREKEELVMTQLGL 156


>gi|42526751|ref|NP_971849.1| putative metalloprotease [Treponema denticola ATCC 35405]
 gi|59799128|sp|Q73NB3|RRMF_TREDE RecName: Full=Probable rRNA maturation factor
 gi|41817066|gb|AAS11760.1| conserved hypothetical protein TIGR00043 [Treponema denticola ATCC
           35405]
 gi|325473810|gb|EGC76998.1| metalloprotease [Treponema denticola F0402]
          Length = 155

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLMLGDIVLAYEIIEI 113
           ++SL+F D   I+ LN +YR ID PT+VLSF     +    G +  M GDIV++ + +  
Sbjct: 39  DISLLFCDDAFIQNLNKQYRDIDSPTDVLSFEQGDEYFDEAGETRFMAGDIVISLDSLSF 98

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            A     +    L  LI+HG LHL G DH D+     M   +  +L
Sbjct: 99  NAEEFNVDINEELKRLIVHGILHLNGMDHSDNSPEQEMLKFQEELL 144


>gi|256396155|ref|YP_003117719.1| hypothetical protein Caci_7048 [Catenulispora acidiphila DSM 44928]
 gi|256362381|gb|ACU75878.1| protein of unknown function UPF0054 [Catenulispora acidiphila DSM
           44928]
          Length = 159

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 6/112 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCS-SLMLGDIVLA 107
           + ELS++  D+  +E L+ ++     PT+VLSFP      A A  D      +LGD+VL 
Sbjct: 38  MAELSILLVDTAAMEQLHIQWMDEPGPTDVLSFPMDELRPARAEDDNEPVPGLLGDVVLC 97

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            E+ E +    G      L  L  HG LHLLGYDH + ++   M GL++ +L
Sbjct: 98  PEVAERQGKDAGHSTAEELRLLTTHGILHLLGYDHAEPEEEAEMFGLQKQLL 149


>gi|56751122|ref|YP_171823.1| putative metalloprotease [Synechococcus elongatus PCC 6301]
 gi|81299213|ref|YP_399421.1| putative metalloprotease [Synechococcus elongatus PCC 7942]
 gi|62901410|sp|Q5N317|RRMF_SYNP6 RecName: Full=Probable rRNA maturation factor
 gi|123557443|sp|Q31R85|RRMF_SYNE7 RecName: Full=Probable rRNA maturation factor
 gi|56686081|dbj|BAD79303.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81168094|gb|ABB56434.1| Protein of unknown function UPF0054 [Synechococcus elongatus PCC
           7942]
          Length = 174

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 8/101 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-----DGCSSLMLGDIVLAYEI 110
           E  L F D   I+ LN +YR +DKPT+VL+F  A         D    L LGD++++   
Sbjct: 46  EACLRFVDDAEIQQLNRDYRQLDKPTDVLAF-AALEDELALGFDPEEPLYLGDVIISVPT 104

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
            + +A   G   E  LV L  HG LHLLG+DH +++    M
Sbjct: 105 AQRQAQ--GHALETELVWLSAHGLLHLLGWDHPNEEQLAAM 143


>gi|312196050|ref|YP_004016111.1| hypothetical protein FraEuI1c_2202 [Frankia sp. EuI1c]
 gi|311227386|gb|ADP80241.1| protein of unknown function UPF0054 [Frankia sp. EuI1c]
          Length = 188

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 7/113 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASS-----DGCSSLMLGDIVL 106
           + ELS++  ++  +  L+  Y G D PT+VL+FP   AF SS     D   + +LGD+VL
Sbjct: 35  LAELSIMIVETAAMTDLHVRYMGEDGPTDVLAFPQDEAFESSYADSADNDPATLLGDVVL 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             E+   +A   G   +  L  L  HG LHLLGYDH +  +   M  L+  +L
Sbjct: 95  CPEVARKQAVTAGHSAQRELHLLCTHGILHLLGYDHAEQAEEREMFRLQEDLL 147


>gi|325123553|gb|ADY83076.1| hypothetical protein BDGL_002490 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 158

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D    + LN +YR  DKPTNVLSFP+           +L LGD+V+   ++  
Sbjct: 41  EIGVACVDLDESQQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  +NH  HL++HG LHLLGYDH   D+DA  MEGLE  IL  L I +PY+
Sbjct: 101 EALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEMEGLEIEILAKLNIANPYQ 157


>gi|326403549|ref|YP_004283631.1| putative metalloprotease [Acidiphilium multivorum AIU301]
 gi|325050411|dbj|BAJ80749.1| putative metalloprotease [Acidiphilium multivorum AIU301]
          Length = 150

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 12/112 (10%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
            ++  D+  ++ LN   RG +KPTNVL++             M  +I+LA  ++  EA  
Sbjct: 48  PVILADNRTVKALNARDRGRNKPTNVLTY------------EMPPEIILALGVVLREARA 95

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             +   +HL HL++HG LHL G DH +  +A  ME LE  +L  LG+ +P++
Sbjct: 96  ARRRPAHHLAHLVVHGALHLAGEDHHEAGEARRMERLETRLLHRLGVPNPWK 147


>gi|148260358|ref|YP_001234485.1| hypothetical protein Acry_1355 [Acidiphilium cryptum JF-5]
 gi|146402039|gb|ABQ30566.1| protein of unknown function UPF0054 [Acidiphilium cryptum JF-5]
          Length = 150

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 12/112 (10%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
            ++  D+  ++ LN   RG +KPTNVL++             M  +I+LA  ++  EA  
Sbjct: 48  PVILADNRTVKALNARDRGRNKPTNVLTY------------EMPPEIILALGVVLREARA 95

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             +   +HL HL++HG LHL G DH +  +A  ME LE  +L  LG+ +P++
Sbjct: 96  ARRRPAHHLAHLVVHGALHLAGEDHHEAGEARRMERLEARLLHRLGVPNPWK 147


>gi|260583649|ref|ZP_05851397.1| metalloprotease [Granulicatella elegans ATCC 700633]
 gi|260158275|gb|EEW93343.1| metalloprotease [Granulicatella elegans ATCC 700633]
          Length = 161

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 11/120 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----------TAFASSDGCSSLMLGDI 104
           E  + F  S RI  +N ++R IDK T+V+SF              F +SD      +GDI
Sbjct: 38  ECCISFVSSERIREINRDFRNIDKVTDVISFALDDEDEDMDPIKNFMASDENFVTSIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ +  + +A   G   E  L  L +HGFLHL GYDH  +++   M GL+  IL   G+
Sbjct: 98  IISVDRAKEQAEEYGHSLERELGFLALHGFLHLNGYDHQTEEEEKEMTGLQTEILTAYGL 157


>gi|86739975|ref|YP_480375.1| putative metalloprotease [Frankia sp. CcI3]
 gi|123765131|sp|Q2JDJ6|RRMF_FRASC RecName: Full=Probable rRNA maturation factor
 gi|86566837|gb|ABD10646.1| protein of unknown function UPF0054 [Frankia sp. CcI3]
          Length = 201

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 7/113 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASS-----DGCSSLMLGDIVL 106
           + ELS++  +   +  L+  Y G + PT+VLSFP   AF +S     D   + +LGD+VL
Sbjct: 35  LAELSVMLVEPKAMTDLHVRYMGEEGPTDVLSFPQDDAFDASWSESVDDDPTTLLGDVVL 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             ++   +A   G  F+  L  L  HG LHLLGYDH +  +   M  ++  +L
Sbjct: 95  CPDVARRQAEQAGHSFDRELSLLCTHGILHLLGYDHAEPDEEREMWKVQSQLL 147


>gi|269123310|ref|YP_003305887.1| hypothetical protein Smon_0530 [Streptobacillus moniliformis DSM
           12112]
 gi|268314636|gb|ACZ01010.1| protein of unknown function UPF0054 [Streptobacillus moniliformis
           DSM 12112]
          Length = 154

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 13/153 (8%)

Query: 11  LDLQIA---VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           L+L I+   ++N  + +E  +    E V      + + K  ++       SL+ TD+  I
Sbjct: 2   LNLDISFKDIDNKEYINEDKILEFSEFVIKNEREDYLDKELYI-------SLLLTDNKNI 54

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEANVLGKEFENHL 126
           + +N EYR  D PT+V+SF  A+  ++    + ++GDIV++ + +E ++           
Sbjct: 55  QEINREYREKDSPTDVISF--AYNETENFGGVEVVGDIVISLDRVEEQSKEYNHSVIREF 112

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            ++++HG LH+LGYDH+++ D  +M   E   L
Sbjct: 113 YYVLVHGLLHILGYDHIEEDDKKIMREKEEYYL 145


>gi|237785903|ref|YP_002906608.1| putative metalloprotease [Corynebacterium kroppenstedtii DSM 44385]
 gi|259646826|sp|C4LJR0|RRMF_CORK4 RecName: Full=Probable rRNA maturation factor
 gi|237758815|gb|ACR18065.1| conserved hypothetical protein [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 202

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLA 107
            ++++   D   IE L+  +  ++ PT+V+SFP       +    +D     MLGDIVL 
Sbjct: 36  ADMTISIVDEPTIEDLHVRWLNLEGPTDVMSFPMDELTPGSGRPDADAPGPAMLGDIVLC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
               E +A+  G    + L  L +HG LHLLGYDHV  ++   M  L+  IL D
Sbjct: 96  PAFAERQAHRAGHGLGHELSLLTVHGILHLLGYDHVAPEEERRMFALQNDILAD 149


>gi|307634994|gb|ADI85044.2| protein of unknown function UPF0054 [Geobacter sulfurreducens
           KN400]
          Length = 150

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 2/106 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+V T    I  +N +Y G D+PTNV+SF          +  +LGD++++ +    EA
Sbjct: 36  ELSVVITGDLGIRRVNRDYLGKDRPTNVISFAMGEGDFGDLNPDVLGDVIISADTAAREA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSIL 159
              G  F + L  L++HG LH+ GYDH    + +A  ME  ER I 
Sbjct: 96  EEAGIAFWSRLCFLLLHGTLHITGYDHERSGEAEARRMEAKEREIF 141


>gi|297622689|ref|YP_003704123.1| hypothetical protein Trad_0443 [Truepera radiovictrix DSM 17093]
 gi|297163869|gb|ADI13580.1| protein of unknown function UPF0054 [Truepera radiovictrix DSM
           17093]
          Length = 147

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIVLAYEIIEIE 114
           EL++V  D  +I  LN  +RG D PT+VLS+P A     G   +  LGDIV++ +    +
Sbjct: 33  ELTIVLVDDPKIRELNRAHRGEDAPTDVLSYPLAEPDDAGFPEVPHLGDIVISLDTAARQ 92

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A   G   E  +V L  HG  HLLG+DH
Sbjct: 93  AAAQGHTLELEVVTLAAHGLTHLLGFDH 120


>gi|224282932|ref|ZP_03646254.1| putative metalloprotease [Bifidobacterium bifidum NCIMB 41171]
 gi|310287375|ref|YP_003938633.1| hypothetical protein BBIF_0854 [Bifidobacterium bifidum S17]
 gi|311064216|ref|YP_003970941.1| hypothetical protein BBPR_0823 [Bifidobacterium bifidum PRL2010]
 gi|313140091|ref|ZP_07802284.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|309251311|gb|ADO53059.1| conserved hypothetical protein [Bifidobacterium bifidum S17]
 gi|310866535|gb|ADP35904.1| Conserved hypothetical protein in uncharacterized protein family
           UPF0054 [Bifidobacterium bifidum PRL2010]
 gi|313132601|gb|EFR50218.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 181

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 11/131 (8%)

Query: 37  AKAVSNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AF 90
           AKA S+L   G +V + +      +L+++F D   I  L+  +  ++ PT+V+SFP    
Sbjct: 15  AKAFSDL---GLWVMDQMRVSTQSDLTILFVDPDPIAELHERWMSLEGPTDVMSFPMDEL 71

Query: 91  ASSDGCSSL--MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
              DG +++  +LGD+V+   +   +A   G      ++ L IHG LHLLGYDHV  +  
Sbjct: 72  RPGDGKTTMEGVLGDLVICPWVAAQQAAAAGHSTMQEMMLLTIHGILHLLGYDHVTPEQE 131

Query: 149 CVMEGLERSIL 159
             M GL+R +L
Sbjct: 132 RQMFGLQRQLL 142


>gi|299768716|ref|YP_003730742.1| metal-dependent hydrolase [Acinetobacter sp. DR1]
 gi|298698804|gb|ADI89369.1| metal-dependent hydrolase [Acinetobacter sp. DR1]
          Length = 160

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D    + LN +YR  DKPTNVLSFP+           +L LGD+V+   ++  
Sbjct: 41  EIGVACVDLAESQQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  +NH  HL++HG LHLLGYDH   D+DA  MEG+E  IL  L I +PY+
Sbjct: 101 EALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEMEGIEVEILAKLNIENPYQ 157


>gi|148243345|ref|YP_001228502.1| metal-dependent hydrolase [Synechococcus sp. RCC307]
 gi|172047894|sp|A5GW90|RRMF_SYNR3 RecName: Full=Probable rRNA maturation factor
 gi|147851655|emb|CAK29149.1| Predicted metal-dependent hydrolase [Synechococcus sp. RCC307]
          Length = 160

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM--LGDIVLA 107
           +K +   L L F D   I  LN ++R   KPT+VLSF     + +    L   LGDIV++
Sbjct: 43  LKADAYSLGLQFCDDAAIAELNGQWRQQPKPTDVLSFAAQEDAPEPLEGLPIELGDIVIS 102

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
               E +A   G   +  L+ L  HG LHLLG+DH D+     M
Sbjct: 103 IPTAERQAPEHGHSLQQELLFLASHGLLHLLGWDHPDEASLAAM 146


>gi|320527302|ref|ZP_08028487.1| conserved hypothetical protein TIGR00043 [Solobacterium moorei
           F0204]
 gi|320132326|gb|EFW24871.1| conserved hypothetical protein TIGR00043 [Solobacterium moorei
           F0204]
          Length = 152

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------LGDIVLAY 108
           +E+S+ F  S  I  +N +YRGID+PT+V+SF    A  DG  + +      LGD+ +  
Sbjct: 37  LEISITFVRSRTIHIINRDYRGIDRPTDVISF----AIRDGLEAFIPDEEKDLGDLFINI 92

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           +    +A   G   +  +  L  HG LH LGYDH++  D   M  L+  IL+
Sbjct: 93  DYARKQAREYGHSEKREMGFLFTHGLLHCLGYDHMNPDDEKKMFALQDRILD 144


>gi|32266731|ref|NP_860763.1| putative metalloprotease [Helicobacter hepaticus ATCC 51449]
 gi|46577395|sp|Q7VGT8|RRMF_HELHP RecName: Full=Probable rRNA maturation factor
 gi|32262782|gb|AAP77829.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 163

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 12/119 (10%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS--------LMLGDIVLAY 108
           L ++  DS  +  +NF +R  +  T+VLSFP     S+G  S        + LG +V+ Y
Sbjct: 42  LEVLAVDSQNMREINFAHRAKNSTTDVLSFP--LDVSEGADSHILAKQMKICLGSVVINY 99

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
           E+ +  A   G   ++ +  L IHGFLH+LGYDH  + D      LE+ I+E LG+ + 
Sbjct: 100 ELAQKVAKQRGHSTQDEISLLFIHGFLHILGYDH--EVDNGEQRALEQKIIESLGLKES 156


>gi|168281735|ref|ZP_02689402.1| conserved hypothetical protein [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|182675946|gb|EDT87851.1| conserved hypothetical protein [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
          Length = 155

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           F D   I+ +N  YR  D  T+V+SF  AF   +  + L LG++ + Y+ +  +AN    
Sbjct: 45  FVDEKTIQEINRNYRNKDYITDVISF--AFDDGEIITPL-LGEMYICYQKVVDQANQFAH 101

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            FE  L  L  HG LHLLGYDH+  +D  +M  L+  IL +L I
Sbjct: 102 SFERELCFLFTHGLLHLLGYDHMKIEDEKIMFALQDEILNELKI 145


>gi|17227767|ref|NP_484315.1| putative metalloprotease [Nostoc sp. PCC 7120]
 gi|26006906|sp|Q8Z032|RRMF_NOSS1 RecName: Full=Probable rRNA maturation factor
 gi|17135249|dbj|BAB77795.1| all0271 [Nostoc sp. PCC 7120]
          Length = 184

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 15/120 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----------PTAFASSDGCSSLMLGDIV 105
           E+ L  TD   I+ +N +YR  +KPT+VL+F          P   A       L LGDIV
Sbjct: 65  EIGLRLTDDTEIQAINAQYRQQNKPTDVLAFAALEVDLPQNPEMVAEP-----LYLGDIV 119

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++    + +A          L  L  HG LHLLG+DH D++    M   +  +LE +GIN
Sbjct: 120 VSINTAQRQAGQQEHSLSTELAWLTAHGLLHLLGWDHPDEESLIAMLQQQVVLLEAIGIN 179


>gi|288916972|ref|ZP_06411344.1| protein of unknown function UPF0054 [Frankia sp. EUN1f]
 gi|288351681|gb|EFC85886.1| protein of unknown function UPF0054 [Frankia sp. EUN1f]
          Length = 159

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 7/118 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCS-----SLMLGDIVL 106
           + ELS++  +   +  L+  Y G D PT+VL+FP   AF  S   S     + +LGD+VL
Sbjct: 35  LAELSVMLVEVDAMTDLHVRYMGEDGPTDVLAFPQDEAFEPSWSESVEEDPTTLLGDVVL 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             E+   +A   G   E  L  L  HG LHLLGYDH + ++   M  L+ S+L    I
Sbjct: 95  CPEVARRQAGQAGHGMERELHILCTHGILHLLGYDHAEPEEEREMWKLQNSLLASWDI 152


>gi|86606284|ref|YP_475047.1| hypothetical protein CYA_1624 [Synechococcus sp. JA-3-3Ab]
 gi|86554826|gb|ABC99784.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 198

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           ELSL  T    I  LN E+R ID PT+VL+F       P       G    +LGDIV++ 
Sbjct: 75  ELSLCLTSDEHIRQLNREFRHIDAPTDVLAFAAEETSTPVELQKITGVR--LLGDIVISV 132

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                +A   G+     L  L  HG LHLLG+DH D+
Sbjct: 133 PTACAQAKAQGQRLSRELAWLASHGLLHLLGWDHPDE 169


>gi|291522236|emb|CBK80529.1| conserved hypothetical protein TIGR00043 [Coprococcus catus GD/7]
          Length = 166

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 17/122 (13%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-----------------CS 97
            E+++V T +  I  +N +YR + KPT+VLSFP       G                   
Sbjct: 38  TEVNVVLTTNDEIAMINRDYRDLFKPTDVLSFPMIDYVRPGDFSVLEEGLTEDFFNPESG 97

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
            L+LGDI+L+ + I  +A   G   +  L  L+ H  LHL GYDH+ D++  VME  +R 
Sbjct: 98  ELILGDIILSVDKIIEQAASYGHSQQRELGFLVAHSMLHLFGYDHMQDEEREVMEEKQRD 157

Query: 158 IL 159
           IL
Sbjct: 158 IL 159


>gi|225351948|ref|ZP_03742971.1| hypothetical protein BIFPSEUDO_03553 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157195|gb|EEG70534.1| hypothetical protein BIFPSEUDO_03553 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 181

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL--MLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP       DG + +  +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGRTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +    M GL+R +L
Sbjct: 96  QQALAAGHNTMEEMMLLTIHGILHLLGYDHATPEQERQMFGLQRQLL 142


>gi|302335756|ref|YP_003800963.1| protein of unknown function UPF0054 [Olsenella uli DSM 7084]
 gi|301319596|gb|ADK68083.1| protein of unknown function UPF0054 [Olsenella uli DSM 7084]
          Length = 168

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGCSSLMLGDIVLAYEI 110
           +S+      R+  LN  +R  D+ T+VLS           A  + C    LGDIVLA   
Sbjct: 42  VSVSIVSDERMRELNRTWRDQDRATDVLSLECERPGDPDLAPGEPCE---LGDIVLAPSY 98

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           I  +A  L     +    L++HG LHLLGYDH+DD +A VME  E ++L+
Sbjct: 99  IRRQAQRLSTTEADECRLLLVHGMLHLLGYDHLDDAEAEVMEAREDALLD 148


>gi|283769579|ref|ZP_06342475.1| metalloprotein, YbeY/ UPF0054 family [Bulleidia extructa W1219]
 gi|283103847|gb|EFC05233.1| metalloprotein, YbeY/ UPF0054 family [Bulleidia extructa W1219]
          Length = 147

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 9/114 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIE 112
           E+S+ F  S  I  +N +YRGID+PT+V+SF    A  DG   +    LGD+ +  +   
Sbjct: 38  EISVTFVRSRTIHRINRDYRGIDRPTDVISF----AIQDGGEEIETHDLGDLFINVDYAV 93

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
            +A   G   +     L  HG LH LGYDH + K+   M  L+  +LE  GI D
Sbjct: 94  RQAKEYGHSEKREFCFLFAHGLLHCLGYDHRNPKEEKKMIALQNQLLE--GIAD 145


>gi|184159547|ref|YP_001847886.1| metal-dependent hydrolase [Acinetobacter baumannii ACICU]
 gi|239504223|ref|ZP_04663533.1| metal-dependent hydrolase [Acinetobacter baumannii AB900]
 gi|260557078|ref|ZP_05829295.1| metal-dependent hydrolase [Acinetobacter baumannii ATCC 19606]
 gi|332873008|ref|ZP_08440967.1| translation metalloprotein YbeY [Acinetobacter baumannii 6014059]
 gi|238685532|sp|A3M934|RRMF_ACIBT RecName: Full=Probable rRNA maturation factor
 gi|238691001|sp|B2HZ57|RRMF_ACIBC RecName: Full=Probable rRNA maturation factor
 gi|183211141|gb|ACC58539.1| predicted metal-dependent hydrolase [Acinetobacter baumannii ACICU]
 gi|193078437|gb|ABO13428.2| hypothetical protein A1S_3031 [Acinetobacter baumannii ATCC 17978]
 gi|260409684|gb|EEX02985.1| metal-dependent hydrolase [Acinetobacter baumannii ATCC 19606]
 gi|322509457|gb|ADX04911.1| metal-dependent hydrolase [Acinetobacter baumannii 1656-2]
 gi|323519478|gb|ADX93859.1| metal-dependent hydrolase [Acinetobacter baumannii TCDC-AB0715]
 gi|332738790|gb|EGJ69658.1| translation metalloprotein YbeY [Acinetobacter baumannii 6014059]
          Length = 158

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D      LN +YR  DKPTNVLSFP+           +L LGD+V+   ++  
Sbjct: 41  EIGIACVDLEESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  +NH  HL++HG LHLLGYDH   D+DA  MEGLE  IL  L I +PY+
Sbjct: 101 EALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEMEGLEIEILAKLNIANPYQ 157


>gi|320353408|ref|YP_004194747.1| pyridoxine 5'-phosphate synthase [Desulfobulbus propionicus DSM
           2032]
 gi|320121910|gb|ADW17456.1| pyridoxine 5'-phosphate synthase [Desulfobulbus propionicus DSM
           2032]
          Length = 392

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----LGDIVLAYE 109
            ++S+VF     +   N +YR  + PTNVLSFP A    +G    +     LGDI+++ +
Sbjct: 37  ADVSVVFLGDAEMAAYNEQYRRKNGPTNVLSFPAA----EGGEGFVAPENELGDILISVD 92

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
               EA   G    + L  LIIHG LHL+GYDH   +++A  M   E+ + + L
Sbjct: 93  TARREAGQQGHSLHHRLTQLIIHGMLHLIGYDHERSEEEAVRMWDYEQELFQQL 146


>gi|212716038|ref|ZP_03324166.1| hypothetical protein BIFCAT_00950 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661405|gb|EEB21980.1| hypothetical protein BIFCAT_00950 [Bifidobacterium catenulatum DSM
           16992]
          Length = 181

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL--MLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP       DG + +  +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGRTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHATPEQERQMFGLQRQLL 142


>gi|296166307|ref|ZP_06848744.1| probable metalloprotease [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898316|gb|EFG77885.1| probable metalloprotease [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 177

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 65/134 (48%), Gaps = 15/134 (11%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------- 87
           + LIS   FV   +      ELS+V  D+  +  L+  +  +  PT+V+SFP        
Sbjct: 16  TELISVARFVIARMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGG 75

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
              A   G S  MLGDIVL  E    +A+  G    + L  L IHG LHLLGYDH +  +
Sbjct: 76  RPDAPEPGPS--MLGDIVLCPEFAAGQADAAGHSLGHELALLTIHGVLHLLGYDHGEPDE 133

Query: 148 ACVMEGLERSILED 161
              M  L+  +LE+
Sbjct: 134 EKEMFALQDRLLEE 147


>gi|51891669|ref|YP_074360.1| hypothetical protein STH531 [Symbiobacterium thermophilum IAM
           14863]
 gi|59799024|sp|Q67S27|RRMF_SYMTH RecName: Full=Probable rRNA maturation factor
 gi|51855358|dbj|BAD39516.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 156

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----CSSLMLGDIVLAYEI 110
           V +S+   D   I  LN ++RG+  PT+VLSF        G       + LGDIV++ E 
Sbjct: 41  VSVSVTLVDDETITDLNRDHRGLASPTDVLSFSQLEGEDMGDLPEGEPMPLGDIVISLER 100

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +A   G  FE  L  L  HG LHL+G+DH   +D   M      IL  LG++
Sbjct: 101 CVSQAAEYGHSFERELGFLTAHGMLHLMGWDHQTPEDEARMMAKTEEILAGLGLS 155


>gi|213692454|ref|YP_002323040.1| protein of unknown function UPF0054 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|254800568|sp|B7GS82|RRMF_BIFLI RecName: Full=Probable rRNA maturation factor
 gi|213523915|gb|ACJ52662.1| protein of unknown function UPF0054 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320458599|dbj|BAJ69220.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 182

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL--MLGDIVLAYEIIE 112
           +L+++F D + I  L+  +  ++ PT+V+SFP       DG + +  +LGDIV+   +  
Sbjct: 36  DLTIMFVDPNPIAELHMRWMNLEGPTDVMSFPMDELRPGDGKTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|169794645|ref|YP_001712438.1| hypothetical protein ABAYE0460 [Acinetobacter baumannii AYE]
 gi|213157984|ref|YP_002320782.1| hypothetical protein AB57_3479 [Acinetobacter baumannii AB0057]
 gi|215482234|ref|YP_002324416.1| Uncharacterized protein family UPF0054 family protein
           [Acinetobacter baumannii AB307-0294]
 gi|301345375|ref|ZP_07226116.1| hypothetical protein AbauAB0_04004 [Acinetobacter baumannii AB056]
 gi|301511253|ref|ZP_07236490.1| hypothetical protein AbauAB05_06733 [Acinetobacter baumannii AB058]
 gi|301595635|ref|ZP_07240643.1| hypothetical protein AbauAB059_07482 [Acinetobacter baumannii
           AB059]
 gi|332855634|ref|ZP_08435977.1| translation metalloprotein YbeY [Acinetobacter baumannii 6013150]
 gi|332868553|ref|ZP_08438219.1| translation metalloprotein YbeY [Acinetobacter baumannii 6013113]
 gi|226703838|sp|B7I9D7|RRMF_ACIB5 RecName: Full=Probable rRNA maturation factor
 gi|226707624|sp|B7GW53|RRMF_ACIB3 RecName: Full=Probable rRNA maturation factor
 gi|238688043|sp|B0V6T5|RRMF_ACIBY RecName: Full=Probable rRNA maturation factor
 gi|169147572|emb|CAM85433.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|213057144|gb|ACJ42046.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
 gi|213989001|gb|ACJ59300.1| Uncharacterized protein family UPF0054 family protein
           [Acinetobacter baumannii AB307-0294]
 gi|332727349|gb|EGJ58785.1| translation metalloprotein YbeY [Acinetobacter baumannii 6013150]
 gi|332733323|gb|EGJ64516.1| translation metalloprotein YbeY [Acinetobacter baumannii 6013113]
          Length = 158

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D      LN +YR  DKPTNVLSFP+           +L LGD+V+   ++  
Sbjct: 41  EIGIACVDLEESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  +NH  HL++HG LHLLGYDH   D+DA  MEGLE  IL  L I +PY+
Sbjct: 101 EALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEMEGLEIEILAKLNIANPYQ 157


>gi|145572760|sp|Q2JU40|RRMF_SYNJA RecName: Full=Probable rRNA maturation factor
          Length = 163

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           ELSL  T    I  LN E+R ID PT+VL+F       P       G    +LGDIV++ 
Sbjct: 40  ELSLCLTSDEHIRQLNREFRHIDAPTDVLAFAAEETSTPVELQKITGVR--LLGDIVISV 97

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                +A   G+     L  L  HG LHLLG+DH D+
Sbjct: 98  PTACAQAKAQGQRLSRELAWLASHGLLHLLGWDHPDE 134


>gi|166366707|ref|YP_001658980.1| putative metalloprotease [Microcystis aeruginosa NIES-843]
 gi|166089080|dbj|BAG03788.1| putative metalloprotease [Microcystis aeruginosa NIES-843]
          Length = 170

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---FASSDG---CSSLMLGDIVLAYE 109
           ELSL  TD   I+T N +YR  D+PT+VL+F T    F   +       L LGDI+++ E
Sbjct: 52  ELSLRLTDDREIQTYNCQYRHKDQPTDVLAFATLEVDFPVDERILETEPLYLGDIIISVE 111

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
             + +A          L  L  H  LHLLG+DH D+     M  L+ ++L+
Sbjct: 112 TAQQQALTQNHSLARELAWLTAHACLHLLGWDHPDETSLLEMLSLQETLLK 162


>gi|325963343|ref|YP_004241249.1| hypothetical protein Asphe3_19600 [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323469430|gb|ADX73115.1| conserved hypothetical protein TIGR00043 [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 157

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 18/155 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  L  L   +F +          F+     ELS++  D   +E L
Sbjct: 1   MSIEVNNESGVQVDEAELVMLSRYIFEQ---------LFIHPQ-AELSILLVDEPAMEKL 50

Query: 71  NFEYRGIDKP--TNVLSFP----TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + E   +D+P  T+VLS P    T           MLGDI +  ++ +++A   G   ++
Sbjct: 51  HIEL--MDEPGSTDVLSVPMDELTPGTPDRPTPQGMLGDIAICPQVAQMQAKNAGHTLQD 108

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            ++ L  HG LHLLGYDH + ++   M GL+R +L
Sbjct: 109 EMLLLTTHGILHLLGYDHAEPEEKAEMFGLQRELL 143


>gi|118580450|ref|YP_901700.1| hypothetical protein Ppro_2034 [Pelobacter propionicus DSM 2379]
 gi|118503160|gb|ABK99642.1| protein of unknown function UPF0054 [Pelobacter propionicus DSM
           2379]
          Length = 127

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS+       I  +N +Y   D+PTNV+SF           SL LGD+V++ +    E
Sbjct: 7   TELSISIVGDRAIRRINRDYLNRDRPTNVISFSLQEGECGAIPSLALGDVVISADTALRE 66

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLE 155
           A   G EF   L  L++HG LHL GYDH    +++A  ME  E
Sbjct: 67  AEEGGMEFFERLCFLLLHGTLHLCGYDHERSGEEEAARMEARE 109


>gi|213965812|ref|ZP_03394004.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
 gi|213951571|gb|EEB62961.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
          Length = 177

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSS--LMLGDIVLA 107
            ELS+   D   IE L+  +  +  PT+V+SFP           D  S    MLGDIVL 
Sbjct: 35  AELSIHIVDLKTIEDLHVRWLDLPGPTDVMSFPMDELTPGSGRPDAASPGPAMLGDIVLC 94

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            E    +A   G    + LV L +HG LHLLGYDHV  ++   M  L+  +L D
Sbjct: 95  PEFAAGQAERAGHPLSHELVLLTVHGVLHLLGYDHVTAEEERQMFSLQNGLLAD 148


>gi|146319053|ref|YP_001198765.1| metalloprotease [Streptococcus suis 05ZYH33]
 gi|166200391|sp|A4VW76|RRMF_STRSY RecName: Full=Probable rRNA maturation factor
 gi|145689859|gb|ABP90365.1| hypothetical protein SSU05_1399 [Streptococcus suis 05ZYH33]
          Length = 165

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTA---FASSD-----GCSSLM---- 100
           E+++ F D+ R+  +N EYRGID+PT+V+S    P +   F   D       + +M    
Sbjct: 37  EMAVTFVDNKRVHEVNLEYRGIDRPTDVVSLEYKPESEIVFDEEDLLDNPELAEMMEDFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  +E  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELYISIDKAREQAEDYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMLGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|327382542|gb|AEA54018.1| Probable rRNA maturation factor [Lactobacillus casei LC2W]
          Length = 120

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLAYEI 110
            E+S+       IE +N EYR  D+ T+V+SF       D       +  +GD+ +    
Sbjct: 5   TEMSITLVGDDEIERINREYRETDRVTDVISFAIEEGEDDLPLLPGMAKNIGDLFIDPLT 64

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM  L++ IL   G+ 
Sbjct: 65  VRRHAEEYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVMIPLQKKILAAYGLT 119


>gi|303239955|ref|ZP_07326477.1| protein of unknown function UPF0054 [Acetivibrio cellulolyticus
           CD2]
 gi|302592434|gb|EFL62160.1| protein of unknown function UPF0054 [Acetivibrio cellulolyticus
           CD2]
          Length = 162

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 11/98 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD-----------I 104
           E+S++F D   I  +N E+R IDKPT+VLSFP         +S                I
Sbjct: 40  EISVMFVDDEGIREINREHRSIDKPTDVLSFPIVDMYEGVINSDDGDFDLDEDLLLLGDI 99

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           V++ E+ +++A   G  FE  L  L+ HG  HLLGYDH
Sbjct: 100 VISLEMTKLQAQEYGHSFERELAFLLTHGVFHLLGYDH 137


>gi|146321259|ref|YP_001200970.1| metalloprotease [Streptococcus suis 98HAH33]
 gi|223932648|ref|ZP_03624647.1| protein of unknown function UPF0054 [Streptococcus suis 89/1591]
 gi|253752116|ref|YP_003025257.1| hypothetical protein SSUSC84_1260 [Streptococcus suis SC84]
 gi|253753941|ref|YP_003027082.1| hypothetical protein SSU1227 [Streptococcus suis P1/7]
 gi|253755184|ref|YP_003028324.1| hypothetical protein SSUBM407_0562 [Streptococcus suis BM407]
 gi|330832406|ref|YP_004401231.1| putative metalloprotease [Streptococcus suis ST3]
 gi|166231363|sp|A4W2I1|RRMF_STRS2 RecName: Full=Probable rRNA maturation factor
 gi|145692065|gb|ABP92570.1| hypothetical protein SSU98_1412 [Streptococcus suis 98HAH33]
 gi|223898618|gb|EEF64980.1| protein of unknown function UPF0054 [Streptococcus suis 89/1591]
 gi|251816405|emb|CAZ52036.1| conserved hypothetical protein [Streptococcus suis SC84]
 gi|251817648|emb|CAZ55396.1| conserved hypothetical protein [Streptococcus suis BM407]
 gi|251820187|emb|CAR46557.1| conserved hypothetical protein [Streptococcus suis P1/7]
 gi|292558698|gb|ADE31699.1| hypothetical protein SSGZ1_1242 [Streptococcus suis GZ1]
 gi|319758492|gb|ADV70434.1| putative metalloprotease [Streptococcus suis JS14]
 gi|329306629|gb|AEB81045.1| putative metalloprotease [Streptococcus suis ST3]
          Length = 165

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTA---FASSD-----GCSSLM---- 100
           E+++ F D+ R+  +N EYRGID+PT+V+S    P +   F   D       + +M    
Sbjct: 37  EMAVTFVDNKRVHEVNLEYRGIDRPTDVVSLEYKPESEIVFDEEDLLDNPELAEMMEDFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  +E  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELYISIDKAREQAEDYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|317132157|ref|YP_004091471.1| protein of unknown function UPF0054 [Ethanoligenens harbinense
           YUAN-3]
 gi|315470136|gb|ADU26740.1| protein of unknown function UPF0054 [Ethanoligenens harbinense
           YUAN-3]
          Length = 164

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 9/135 (6%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----FASSDGC 96
           + L ++G+   E   E+++ F D  +I+ LN +YR  D  T+VLSFP      F  +   
Sbjct: 31  ATLANEGF---EGSAEVNVTFVDDAQIKELNAQYRHKDTATDVLSFPMGENGKFDLNPDT 87

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLE 155
            + +LGD+V++ E    +A   G   ++ +  L +H  LH+LGYDH     +A  M   E
Sbjct: 88  GAYVLGDVVISLETATAQAEKYGHSLQHEVAFLTVHSMLHILGYDHEQGGIEAVRMHEHE 147

Query: 156 RSILEDLGI-NDPYE 169
             I+  LG   D YE
Sbjct: 148 DVIMNALGFPRDVYE 162


>gi|191638507|ref|YP_001987673.1| Putative metalloprotease LSEI_1518 [Lactobacillus casei BL23]
 gi|238693043|sp|B3WEL4|RRMF_LACCB RecName: Full=Probable rRNA maturation factor
 gi|190712809|emb|CAQ66815.1| Putative metalloprotease LSEI_1518 [Lactobacillus casei BL23]
 gi|327385739|gb|AEA57213.1| Probable rRNA maturation factor [Lactobacillus casei BD-II]
          Length = 152

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLAYEI 110
            E+S+       IE +N EYR  D+ T+V+SF       D       +  +GD+ +    
Sbjct: 37  TEMSITLVGDDEIERINREYRETDRVTDVISFAIEEGEDDLPLLPGMAKNIGDLFIDPLT 96

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM  L++ IL   G+ 
Sbjct: 97  VRRHAEEYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVMIPLQKKILAAYGLT 151


>gi|293610873|ref|ZP_06693173.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827217|gb|EFF85582.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 158

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D    + LN +YR  DKPTNVLSFP+           +L LGD+V+   ++  
Sbjct: 41  EIGVACVDLDESQQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  +NH  HL++HG LHLLGYDH   D+DA  MEGLE  IL  + I +PY+
Sbjct: 101 EALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEMEGLEIEILAKINIANPYQ 157


>gi|227872335|ref|ZP_03990689.1| possible metal-dependent hydrolase [Oribacterium sinus F0268]
 gi|227841818|gb|EEJ52094.1| possible metal-dependent hydrolase [Oribacterium sinus F0268]
          Length = 141

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------------CSS 98
           V LS+ F +S  +  LN   RGID  T+VLSFP       G                   
Sbjct: 14  VSLSVSFIESEEMRELNLSQRGIDYATDVLSFPLLSLDPPGSFPESLEEEWGNFDPETGE 73

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           LMLGDIVL ++ ++ +A   G   E  L  LI H  LHL  YDH+++++   ME  +  I
Sbjct: 74  LMLGDIVLNWDKVKEQAESYGHSLERELAFLIAHSLLHLFSYDHMEEEERKEMEQKQEEI 133

Query: 159 LEDLG 163
           LE+ G
Sbjct: 134 LENRG 138


>gi|310779143|ref|YP_003967476.1| protein of unknown function UPF0054 [Ilyobacter polytropus DSM
           2926]
 gi|309748466|gb|ADO83128.1| protein of unknown function UPF0054 [Ilyobacter polytropus DSM
           2926]
          Length = 154

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 72/126 (57%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           K +  ++ + Y   +  V +S++ TD+  I+ +N +YRG D PT+V+SF       +   
Sbjct: 25  KYIKGVLEEEYPEAKKPVYISMLLTDNENIQIVNRDYRGKDTPTDVISFAYHETEFEIGP 84

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
              LGDIV++ E +E +A   G  F+    +++ HG LHLLGYDH++D+D  +M   E  
Sbjct: 85  YDTLGDIVISLERVEEQAEDYGHNFQREFYYVLTHGLLHLLGYDHIEDEDKSIMREKEEE 144

Query: 158 ILEDLG 163
           IL+  G
Sbjct: 145 ILKKHG 150


>gi|113478351|ref|YP_724412.1| putative metalloprotease [Trichodesmium erythraeum IMS101]
 gi|122964299|sp|Q10UY5|RRMF_TRIEI RecName: Full=Probable rRNA maturation factor
 gi|110169399|gb|ABG53939.1| protein of unknown function UPF0054 [Trichodesmium erythraeum
           IMS101]
          Length = 183

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           ELSL  TD   I+ LN +YR  ++PT+VL+F       P      D    L LGDIV++ 
Sbjct: 60  ELSLRLTDDSEIQILNNKYRYQNQPTDVLAFANLEVDIPQP-EVVDSDLQLYLGDIVISV 118

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E    +A   G      L  L  HGFLHLLG+DH+D +    M   +  +L  +G
Sbjct: 119 ETAFQQAKQQGHPLITELTWLAAHGFLHLLGWDHLDQESWQKMVKQQLFLLNAVG 173


>gi|186681803|ref|YP_001864999.1| metalloprotease [Nostoc punctiforme PCC 73102]
 gi|186464255|gb|ACC80056.1| protein of unknown function UPF0054 [Nostoc punctiforme PCC 73102]
          Length = 179

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 6/115 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---FASSD---GCSSLMLGDIVLAYE 109
           E+ L  TD  +I+ LN +YR  +KPT+VL+F      F  S        L LGDI+++ +
Sbjct: 58  EIGLCLTDDSQIQELNAQYRQQNKPTDVLAFAALEVDFPQSKEMLASVPLYLGDIIVSVD 117

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             + +A          L  L  HG LHLLG+DH D++    M   +  +L  +GI
Sbjct: 118 TAQRQAKQQEHSLPTELAWLASHGLLHLLGWDHPDEESLGRMLKQQVRLLNAIGI 172


>gi|291544276|emb|CBL17385.1| conserved hypothetical protein TIGR00043 [Ruminococcus sp. 18P13]
          Length = 166

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 21/150 (14%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           G  + +R  C+ V A          +F ++   E+S+ F  +  I  LN  YR  D  T+
Sbjct: 20  GIRLLIRRCCQAVLATE--------HFDRD--AEVSVSFVSNQEIRNLNKIYRNKDSVTD 69

Query: 83  VLSFPTAFASSDGCSSL-------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           VLSFP     SDG + +       +LGD+V++ E    +A+  G   E  +  L +H  L
Sbjct: 70  VLSFPLL---SDGKADVNQETGYVLLGDVVISLETAFKQAHNFGHSLEREVGFLTVHSML 126

Query: 136 HLLGYDH-VDDKDACVMEGLERSILEDLGI 164
           HLLGYDH     D   M   E ++LE LGI
Sbjct: 127 HLLGYDHETSPLDERKMREKEEAVLEKLGI 156


>gi|163814101|ref|ZP_02205493.1| hypothetical protein COPEUT_00254 [Coprococcus eutactus ATCC 27759]
 gi|158450550|gb|EDP27545.1| hypothetical protein COPEUT_00254 [Coprococcus eutactus ATCC 27759]
          Length = 170

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 16/132 (12%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDG-----CSS------ 98
           + E++++ TD+  I  +N + R ID+ T+VLSFP    T   + DG     C +      
Sbjct: 37  VCEVNVLLTDNDSIHEINNQQRNIDRATDVLSFPLIDYTIPGNFDGLEDSRCDNFDLTTG 96

Query: 99  -LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
            L+LGDIV++ + +  +A          L  L+ H  LHL GYDH+++ +  VME ++  
Sbjct: 97  ELLLGDIVISIDKVYEQAAEYNHSKTRELAFLVAHSMLHLSGYDHMEEDERKVMEDMQEK 156

Query: 158 ILEDLGINDPYE 169
           IL   G    YE
Sbjct: 157 ILTTKGYTRDYE 168


>gi|291456691|ref|ZP_06596081.1| putative metalloprotease [Bifidobacterium breve DSM 20213]
 gi|291381968|gb|EFE89486.1| putative metalloprotease [Bifidobacterium breve DSM 20213]
          Length = 183

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL--MLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP       DG + +  +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAELHMRWMSLEGPTDVMSFPMDELRPGDGKTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|24214384|ref|NP_711865.1| putative metal-dependent hydrolase [Leptospira interrogans serovar
           Lai str. 56601]
 gi|46577486|sp|Q8F5J7|RRMF_LEPIN RecName: Full=Probable rRNA maturation factor
 gi|24195321|gb|AAN48883.1| predicted metal-dependent hydrolase [Leptospira interrogans serovar
           Lai str. 56601]
          Length = 141

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 25/144 (17%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF- 90
           C+++F K +++          +  ELSL+      ++ +N   RG DK T+VLSFP  F 
Sbjct: 3   CKILFRKELND----------SECELSLLLVGDSDMKEINRLRRGKDKTTDVLSFPLEFD 52

Query: 91  -----------ASSDG--CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
                       SSD      + LG+IV++ + ++ +A  +G   ++    L++HGFLHL
Sbjct: 53  FSPLQKILPKNTSSDQKMFPPIALGEIVISIDTLQKQAKEIGHSEKDEFYRLLVHGFLHL 112

Query: 138 LGYDH-VDDKDACVMEGLERSILE 160
           LGYDH   DK+  +M+  E   LE
Sbjct: 113 LGYDHERGDKEEHIMKLKEDECLE 136


>gi|295094824|emb|CBK83915.1| conserved hypothetical protein TIGR00043 [Coprococcus sp. ART55/1]
          Length = 170

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 16/130 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDG------------CSSL 99
           E++++ TD+  I  +N + R ID+ T+VLSFP    T   + DG               L
Sbjct: 39  EVNVLLTDNDSIHEINNQQRNIDRATDVLSFPLIDYTIPGNFDGLEDSRCDYFDLTTDEL 98

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDIV++ + +  +A          L  L+ H  LHL GYDH++D +  VME ++  IL
Sbjct: 99  LLGDIVISIDKVYEQATEYNHSKTRELAFLVAHSMLHLSGYDHMEDDERRVMEEMQEKIL 158

Query: 160 EDLGINDPYE 169
              G    YE
Sbjct: 159 TMKGYTRDYE 168


>gi|126643046|ref|YP_001086030.1| hypothetical protein A1S_3031 [Acinetobacter baumannii ATCC 17978]
          Length = 110

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 6/110 (5%)

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGK 120
           +SH+   LN +YR  DKPTNVLSFP+           +L LGD+V+   ++  EA    K
Sbjct: 3   ESHQ---LNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKK 59

Query: 121 EFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
             +NH  HL++HG LHLLGYDH   D+DA  MEGLE  IL  L I +PY+
Sbjct: 60  TAQNHFAHLLVHGVLHLLGYDHETSDEDAEEMEGLEIEILAKLNIANPYQ 109


>gi|120404789|ref|YP_954618.1| putative metalloprotease [Mycobacterium vanbaalenii PYR-1]
 gi|145558818|sp|A1TBR2|RRMF_MYCVP RecName: Full=Probable rRNA maturation factor
 gi|119957607|gb|ABM14612.1| protein of unknown function UPF0054 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 184

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 15/132 (11%)

Query: 43  LISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TA 89
           LIS   FV   +      ELS++  D+  +  L+  +  +  PT+V+SFP          
Sbjct: 18  LISVARFVIGKMDVNPAAELSMLLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRP 77

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
            A   G S  MLGDIVL  E    +A   G      L  L +HG LHLLGYDH +  +  
Sbjct: 78  DAPEPGPS--MLGDIVLCPEFAAKQAADAGHTLGQELALLTVHGVLHLLGYDHAEPDEEK 135

Query: 150 VMEGLERSILED 161
            M  L+R +LE+
Sbjct: 136 EMFALQRELLEE 147


>gi|217967710|ref|YP_002353216.1| protein of unknown function UPF0054 [Dictyoglomus turgidum DSM
           6724]
 gi|217336809|gb|ACK42602.1| protein of unknown function UPF0054 [Dictyoglomus turgidum DSM
           6724]
          Length = 142

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 40  VSNLISKGYFVKE----NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           V N + K  F KE    N  ++S+V  D  +I  LN +YRG D PT+VLSF         
Sbjct: 20  VKNFV-KEVFKKEGFLPNKYDISVVLVDDEKIRELNSKYRGKDTPTDVLSFSLG----KD 74

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
               ++G+I ++ +  +I+A    K   + +  L +HG LH+LGYDH +D++   ME   
Sbjct: 75  PKGRIVGEIYISIDTAKIQAKENNKTLIDEVAFLTLHGLLHILGYDHENDEEYEKMEKET 134

Query: 156 RSIL 159
           + ++
Sbjct: 135 KKLI 138


>gi|116072020|ref|ZP_01469288.1| hypothetical protein BL107_07709 [Synechococcus sp. BL107]
 gi|116065643|gb|EAU71401.1| hypothetical protein BL107_07709 [Synechococcus sp. BL107]
          Length = 180

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 2/132 (1%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           + F ++  +L       +   V L L FTD   I  LN E+R    PT+VLSF     + 
Sbjct: 36  IEFIRSNPDLSCPSVVRQAPEVSLGLRFTDDAGITELNSEWRQRSGPTDVLSFAALDDTP 95

Query: 94  DGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           D    +++ LGDI+++ +  + +A          L  LI HG LHLLG+DH D++    M
Sbjct: 96  DWLEGAAVELGDIIVSLDTAQRQAQDHDHSLGYELHWLISHGLLHLLGWDHPDERSLRAM 155

Query: 152 EGLERSILEDLG 163
             L+  +L+  G
Sbjct: 156 LDLQERLLDSTG 167


>gi|300866177|ref|ZP_07110895.1| putative metalloprotease Tery_5027 [Oscillatoria sp. PCC 6506]
 gi|300335833|emb|CBN56055.1| putative metalloprotease Tery_5027 [Oscillatoria sp. PCC 6506]
          Length = 177

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 12/119 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---------PTAFASSDGCSSLMLGDIVL 106
           ELSL  T    ++TLN +YR  ++PT+VL+F         P    +S     L LGDIV+
Sbjct: 59  ELSLRLTGDPEMQTLNSQYRQQNQPTDVLAFAALEVNCPHPQEMVAS---MPLYLGDIVI 115

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + +    +A          L  L  HGFLHLLG+DH D+     M   +  +L+ +G+ 
Sbjct: 116 SVDTAHRQAQQQHHPLTTELAWLAAHGFLHLLGWDHPDEDSLNSMLNQQEILLKTIGLT 174


>gi|145352030|ref|XP_001420362.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580596|gb|ABO98655.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 411

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 5/109 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+       I +LN  YR  D  T+VLSFP   A S G  ++ LGD++++ +    +A
Sbjct: 5   ELSVALCSDEYIRSLNAGYREKDSATDVLSFP---AESFGPMAV-LGDVIVSVDTASAQA 60

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLG 163
             +G    +    L++HG LHLLG DH V + +A VM   E+ +L+ LG
Sbjct: 61  REVGHSLRDECRVLLVHGTLHLLGMDHEVSESEAEVMAAAEQEVLKALG 109


>gi|116495001|ref|YP_806735.1| metal-dependent hydrolase [Lactobacillus casei ATCC 334]
 gi|227534992|ref|ZP_03965041.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239631405|ref|ZP_04674436.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066563|ref|YP_003788586.1| putative metal-dependent hydrolase [Lactobacillus casei str. Zhang]
 gi|122263582|sp|Q038S9|RRMF_LACC3 RecName: Full=Probable rRNA maturation factor
 gi|116105151|gb|ABJ70293.1| Predicted metal-dependent hydrolase [Lactobacillus casei ATCC 334]
 gi|227187383|gb|EEI67450.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239525870|gb|EEQ64871.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438970|gb|ADK18736.1| Predicted metal-dependent hydrolase [Lactobacillus casei str.
           Zhang]
          Length = 152

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--- 94
           K +     K   + EN  E+S+       IE +N EYR  D+ T+V+SF       D   
Sbjct: 21  KKLVAFCGKQLKLPEN-TEMSITLVGDDEIERINREYRETDRVTDVISFAIEEGEDDLPL 79

Query: 95  -GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
               +  +GD+ +    +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM  
Sbjct: 80  LPGMAKNIGDLFIDPLTVRRHAEDYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVMIP 139

Query: 154 LERSILEDLGIN 165
           L++ IL   G+ 
Sbjct: 140 LQKKILAAYGLT 151


>gi|118586861|ref|ZP_01544295.1| metal-dependent hydrolase [Oenococcus oeni ATCC BAA-1163]
 gi|118432693|gb|EAV39425.1| metal-dependent hydrolase [Oenococcus oeni ATCC BAA-1163]
          Length = 169

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVL 106
           +K+N  E+S+ F +  +I  +N EYR  D+ T+V+SF    +     DG +   LGD+ +
Sbjct: 51  LKQN-YEMSVNFVNDEKIHQINKEYRNTDRATDVISFALEESDRIHIDGVAE-ELGDLFI 108

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA-CVMEGLERSILEDLGI 164
           + +    +A      +   L +L +HGFLHLLGYDH   + A   M GL+  ILE  G+
Sbjct: 109 SLDHAHAQAEEYLHSYNRELAYLAVHGFLHLLGYDHTRSQAAEDEMFGLQDKILEGYGL 167


>gi|23465435|ref|NP_696038.1| putative metalloprotease [Bifidobacterium longum NCC2705]
 gi|46191169|ref|ZP_00120251.2| COG0319: Predicted metal-dependent hydrolase [Bifidobacterium
           longum DJO10A]
 gi|189439458|ref|YP_001954539.1| putative metalloprotease [Bifidobacterium longum DJO10A]
 gi|227545911|ref|ZP_03975960.1| metalloprotease [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239622041|ref|ZP_04665072.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|296454042|ref|YP_003661185.1| hypothetical protein BLJ_0890 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312132866|ref|YP_004000205.1| metal-dependent hydrolase [Bifidobacterium longum subsp. longum
           BBMN68]
 gi|317482194|ref|ZP_07941216.1| hypothetical protein HMPREF0177_00609 [Bifidobacterium sp.
           12_1_47BFAA]
 gi|322688981|ref|YP_004208715.1| hypothetical protein BLIF_0794 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322690950|ref|YP_004220520.1| hypothetical protein BLLJ_0760 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|29428213|sp|Q8G5Z0|RRMF_BIFLO RecName: Full=Probable rRNA maturation factor
 gi|238692063|sp|B3DSC2|RRMF_BIFLD RecName: Full=Probable rRNA maturation factor
 gi|23326086|gb|AAN24674.1| conserved hypothetical protein with duf0054 [Bifidobacterium longum
           NCC2705]
 gi|189427893|gb|ACD98041.1| Putative metal-dependent hydrolase [Bifidobacterium longum DJO10A]
 gi|227213545|gb|EEI81394.1| metalloprotease [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239515232|gb|EEQ55099.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291516986|emb|CBK70602.1| conserved hypothetical protein TIGR00043 [Bifidobacterium longum
           subsp. longum F8]
 gi|296183473|gb|ADH00355.1| protein of unknown function UPF0054 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|311773835|gb|ADQ03323.1| Putative metal-dependent hydrolase [Bifidobacterium longum subsp.
           longum BBMN68]
 gi|316916332|gb|EFV37732.1| hypothetical protein HMPREF0177_00609 [Bifidobacterium sp.
           12_1_47BFAA]
 gi|320455806|dbj|BAJ66428.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320460317|dbj|BAJ70937.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 182

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSL--MLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP       DG + +  +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAELHMRWMNLEGPTDVMSFPMDELRPGDGKTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|68535676|ref|YP_250381.1| putative metalloprotease [Corynebacterium jeikeium K411]
 gi|260578250|ref|ZP_05846166.1| metalloprotease [Corynebacterium jeikeium ATCC 43734]
 gi|123651314|sp|Q4JWP4|RRMF_CORJK RecName: Full=Probable rRNA maturation factor
 gi|68263275|emb|CAI36763.1| conserved hypothetical protein [Corynebacterium jeikeium K411]
 gi|258603552|gb|EEW16813.1| metalloprotease [Corynebacterium jeikeium ATCC 43734]
          Length = 182

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGC--SSLMLGDIVLA 107
            ELS+   D   IE L+  +  +  PT+V+SFP       +   D    S  MLGDI+L 
Sbjct: 36  AELSIHIVDLETIEDLHVRWMDLPGPTDVMSFPMDELTPGWGRKDAAEPSPAMLGDIMLC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +  E +A   G    + L  L +HG LHLLG+DHV  +D   M  L+  IL
Sbjct: 96  PDFAEGQATRAGHSLAHELDLLTVHGVLHLLGFDHVTPEDEQKMFALQNEIL 147


>gi|45657953|ref|YP_002039.1| hypothetical protein LIC12105 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|62901441|sp|Q72QK8|RRMF_LEPIC RecName: Full=Probable rRNA maturation factor
 gi|45601194|gb|AAS70676.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 141

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 25/144 (17%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF- 90
           C+++F K +++          +  ELSL+      ++ +N   RG DK T+VLSFP  F 
Sbjct: 3   CKILFRKELND----------SECELSLLLVGDSDMKEINRLRRGKDKTTDVLSFPLEFD 52

Query: 91  -----------ASSDG--CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
                       SSD      + LG+IV++ + ++ +A  +G   ++    L++HGFLHL
Sbjct: 53  FSPLQKILPKNTSSDQKMFPPVALGEIVISIDTLQKQAKEIGHSEKDEFYRLLVHGFLHL 112

Query: 138 LGYDH-VDDKDACVMEGLERSILE 160
           LGYDH   DK+  +M+  E   LE
Sbjct: 113 LGYDHERGDKEEHIMKLKEDECLE 136


>gi|57237128|ref|YP_178140.1| putative metalloprotease [Campylobacter jejuni RM1221]
 gi|86149543|ref|ZP_01067773.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|86151268|ref|ZP_01069483.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|88597229|ref|ZP_01100464.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|205356496|ref|ZP_03223260.1| hypothetical protein Cj8421_0120 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218561802|ref|YP_002343581.1| putative metalloprotease [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315123723|ref|YP_004065727.1| hypothetical protein ICDCCJ07001_114 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|46577566|sp|Q9PJ06|RRMF_CAMJE RecName: Full=Probable rRNA maturation factor
 gi|62901174|sp|Q5HX45|RRMF_CAMJR RecName: Full=Probable rRNA maturation factor
 gi|57165932|gb|AAW34711.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           RM1221]
 gi|85839811|gb|EAQ57070.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|85841615|gb|EAQ58862.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|88190290|gb|EAQ94264.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112359508|emb|CAL34292.1| conserved hypothetical protein Cj0121 [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|205345683|gb|EDZ32322.1| hypothetical protein Cj8421_0120 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|284925414|gb|ADC27766.1| putative metalloprotease [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315017445|gb|ADT65538.1| hypothetical protein ICDCCJ07001_114 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315057561|gb|ADT71890.1| predicted metal-dependent hydrolase [Campylobacter jejuni subsp.
           jejuni S3]
 gi|315926941|gb|EFV06303.1| uncharacterized protein family UPF0054 family protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 135

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LVF DS  ++ +N E R  DK T+VLSFP          SL LG +V+  ++ + +A
Sbjct: 22  DVELVFVDSKEMQEINLEQRKQDKTTDVLSFPLENIDE----SLPLGSVVINVDLAKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             LG  +E  +  L IH  LHLLG+DH +D
Sbjct: 78  KELGHSYEEEISLLFIHAMLHLLGFDHEND 107


>gi|189425788|ref|YP_001952965.1| hypothetical protein Glov_2732 [Geobacter lovleyi SZ]
 gi|189422047|gb|ACD96445.1| protein of unknown function UPF0054 [Geobacter lovleyi SZ]
          Length = 128

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS+       I  LN EY G D+PTNV+SF          +   LGD+V++ +    E
Sbjct: 7   TELSVTVVGDRAIHRLNREYLGKDRPTNVISFSLQEGEFGDLTPHALGDVVISADTAADE 66

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSILE 160
           A   G      L+ L++HG LHL GYDH    + +A  ME  ER I +
Sbjct: 67  AQSCGWGGYERLIFLLLHGILHLTGYDHERSGEAEARRMERKEREIWK 114


>gi|315929911|gb|EFV09070.1| uncharacterized protein family UPF0054 family protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 135

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LVF DS  ++ +N E R  DK T+VLSFP          SL LG +V+  ++ + +A
Sbjct: 22  DVELVFVDSKEMQEINLEQRKQDKTTDVLSFPLENIDE----SLPLGSVVINVDLAKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             LG  +E  +  L IH  LHLLG+DH +D
Sbjct: 78  KELGHSYEEEISLLFIHAMLHLLGFDHEND 107


>gi|295099664|emb|CBK88753.1| conserved hypothetical protein TIGR00043 [Eubacterium cylindroides
           T2-87]
          Length = 151

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC---SSLMLGDIVLAYEIIEI 113
           LS++F    +I  +N EYR ID PT+V+SF      SD     S   LGDI +  + I  
Sbjct: 40  LSVIFVTPEQIHEINKEYRKIDCPTDVISFALQDDLSDVLIEESMCELGDIFINVQAIRD 99

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +A   G         L  HG LHL+GYDH++ ++  VM  L+  IL+++
Sbjct: 100 QAKEYGHSLRREACFLFCHGLLHLMGYDHMEPEEEKVMFELQDVILDEV 148


>gi|52081079|ref|YP_079870.1| putative metalloprotease [Bacillus licheniformis ATCC 14580]
 gi|52786458|ref|YP_092287.1| putative metalloprotease [Bacillus licheniformis ATCC 14580]
 gi|319644963|ref|ZP_07999196.1| metalloprotease [Bacillus sp. BT1B_CT2]
 gi|59799095|sp|Q65H70|RRMF_BACLD RecName: Full=Probable rRNA maturation factor
 gi|52004290|gb|AAU24232.1| Conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|52348960|gb|AAU41594.1| YqfG [Bacillus licheniformis ATCC 14580]
 gi|317392772|gb|EFV73566.1| metalloprotease [Bacillus sp. BT1B_CT2]
          Length = 158

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 12/120 (10%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL---------MLGDIV 105
            E+S+   ++  I+ +N EYRG D PT+V+SF       DG   +         +LGDI+
Sbjct: 39  AEVSVTIVNNEEIQKINKEYRGKDYPTDVISFAL---EEDGEGEVEIIGADMPPVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +    +A   G      L  L +HGFLHLLGYDH+ +++   M   ++ IL   G++
Sbjct: 96  ISVDKAREQAEEYGHSLMRELGFLTVHGFLHLLGYDHMTEEEEKEMFTKQKEILNRYGLS 155


>gi|168307881|ref|ZP_02690556.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           1 str. ATCC 27813]
 gi|171902725|gb|EDT49014.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           1 str. ATCC 27813]
          Length = 155

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           F D   I+ +N  YR  D  T+V+SF  AF   +  + L LG++ + Y+ +  +A+    
Sbjct: 45  FVDEKTIQKINKNYRNKDYITDVISF--AFDDGEIITPL-LGEMYICYQKVVDQASQFAH 101

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            FE  L  L  HG LHLLGYDH+  +D  +M  L+  IL +L I
Sbjct: 102 SFERELCFLFTHGLLHLLGYDHIKIEDEKIMFALQDEILNELKI 145


>gi|283955565|ref|ZP_06373060.1| hypothetical protein C1336_000020094 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283793026|gb|EFC31800.1| hypothetical protein C1336_000020094 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 134

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LVF DS  ++ +N E R  DK T+VLSFP          SL LG +V+  ++ + +A
Sbjct: 22  DVELVFVDSKEMQEINLEQRKQDKTTDVLSFPLENIDE----SLPLGSVVINVDLAKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             LG  +E  +  L IH  LHLLG+DH +D
Sbjct: 78  KELGHSYEEEISLLFIHAMLHLLGFDHEND 107


>gi|86153617|ref|ZP_01071820.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|85842578|gb|EAQ59790.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni HB93-13]
          Length = 134

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LVF DS  ++ +N E R  DK T+VLSFP          SL LG +V+  ++ + +A
Sbjct: 22  DVELVFVDSKEMQEINLEQRKQDKTTDVLSFPLENIDE----SLPLGSVVINVDLAKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             LG  +E  +  L IH  LHLLG+DH +D
Sbjct: 78  KELGHSYEEEISLLFIHAMLHLLGFDHEND 107


>gi|300780717|ref|ZP_07090571.1| metalloprotease [Corynebacterium genitalium ATCC 33030]
 gi|300532424|gb|EFK53485.1| metalloprotease [Corynebacterium genitalium ATCC 33030]
          Length = 195

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLA 107
            E+++   DS  +  L+  +  +  PT+V+SFP       +A   +      MLGDI+L 
Sbjct: 36  TEVTITCVDSPTMADLHMRWMDLPGPTDVMSFPMDELSPGSARPDAAAIGPAMLGDIILC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +    +A   G    + +  L +HG LHLLGYDH    D   M GL+  IL D
Sbjct: 96  PDYDRKQAEAAGHPLGHEMALLTVHGVLHLLGYDHATPADEREMFGLQNEILAD 149


>gi|229817682|ref|ZP_04447964.1| hypothetical protein BIFANG_02953 [Bifidobacterium angulatum DSM
           20098]
 gi|229785471|gb|EEP21585.1| hypothetical protein BIFANG_02953 [Bifidobacterium angulatum DSM
           20098]
          Length = 181

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIE 112
           +L+++F D   I  ++  +  ++ PT+V+SFP         S++M   LGDIV+   +  
Sbjct: 36  DLTILFVDPDPIAQMHMHWMNLEGPTDVMSFPMDELRPGNGSTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV+ +    M GL+R +L
Sbjct: 96  QQAAAAGHGVLQEMLLLTIHGILHLLGYDHVNAEQERQMFGLQRQLL 142


>gi|159026769|emb|CAO89056.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 170

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---FASSDG---CSSLMLGDIVLAYE 109
           ELSL  TD   I+T N +YR  D+PT+VL+F          +G      L LGDI+++ E
Sbjct: 52  ELSLRLTDDREIQTYNSQYRHKDQPTDVLAFAALEVDLPVDEGILETEPLYLGDIIISVE 111

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
             + +A          L  L  H  LHLLG+DH D+     M  L+ ++L+
Sbjct: 112 TAQQQALTQNHSLARELAWLTAHACLHLLGWDHPDETSLLEMLSLQETLLK 162


>gi|121613427|ref|YP_999845.1| putative metalloprotease [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167004816|ref|ZP_02270574.1| hypothetical protein Cjejjejuni_00700 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|145572759|sp|A1VXK4|RRMF_CAMJJ RecName: Full=Probable rRNA maturation factor
 gi|87250280|gb|EAQ73238.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 81-176]
          Length = 134

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LVF DS  ++ +N E R  DK T+VLSFP          SL LG +V+  ++ + +A
Sbjct: 22  DVELVFVDSKEMQEINLEQRKQDKTTDVLSFPLENIDE----SLPLGSVVINVDLAKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             LG  +E  +  L IH  LHLLG+DH +D
Sbjct: 78  KELGHSYEEEISLLFIHAMLHLLGFDHEND 107


>gi|168702468|ref|ZP_02734745.1| hypothetical protein GobsU_23272 [Gemmata obscuriglobus UQM 2246]
          Length = 146

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 6/129 (4%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           K  +  + +G  VK   V  +L F D+  I  LN ++   ++PT+VL+FP     +D  +
Sbjct: 20  KDAARAVLEGEGVKAGKV--TLAFVDNPHIHRLNKQFLNHNEPTDVLTFPY----TDPGA 73

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             + G++V+ YE+ +  A      F   L+  ++HG LHL GYD  DD     M   ER 
Sbjct: 74  KSLEGEVVIGYEVAKEYAADRNHAFNLELLLYVVHGCLHLTGYDDTDDDSEREMRAKERE 133

Query: 158 ILEDLGIND 166
            L  LG+ D
Sbjct: 134 YLTKLGLPD 142


>gi|116491017|ref|YP_810561.1| metal-dependent hydrolase [Oenococcus oeni PSU-1]
 gi|290890498|ref|ZP_06553573.1| hypothetical protein AWRIB429_0963 [Oenococcus oeni AWRIB429]
 gi|122276801|sp|Q04F76|RRMF_OENOB RecName: Full=Probable rRNA maturation factor
 gi|116091742|gb|ABJ56896.1| Predicted metal-dependent hydrolase [Oenococcus oeni PSU-1]
 gi|290479894|gb|EFD88543.1| hypothetical protein AWRIB429_0963 [Oenococcus oeni AWRIB429]
          Length = 153

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVL 106
           +K+N  E+S+ F +  +I  +N EYR  D+ T+V+SF    +     DG +   LGD+ +
Sbjct: 35  LKQN-YEMSVNFVNDEKIHQINKEYRNTDRATDVISFALEESDRIHIDGVAE-ELGDLFI 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA-CVMEGLERSILEDLGI 164
           + +    +A      +   L +L +HGFLHLLGYDH   + A   M GL+  ILE  G+
Sbjct: 93  SLDHAHAQAEEYLHSYNRELAYLAVHGFLHLLGYDHTRSQAAEDEMFGLQDKILEGYGL 151


>gi|157414434|ref|YP_001481690.1| putative metalloprotease [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385398|gb|ABV51713.1| hypothetical protein C8J_0114 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747078|gb|ADN90348.1| Putative metalloprotease [Campylobacter jejuni subsp. jejuni M1]
 gi|315931515|gb|EFV10482.1| uncharacterized protein family UPF0054 family protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 134

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LVF DS  ++ +N E R  DK T+VLSFP          SL LG +V+  ++ + +A
Sbjct: 22  DVELVFVDSKEMQEINLEQRKQDKTTDVLSFPLENIDE----SLPLGSVVINVDLAKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             LG  +E  +  L IH  LHLLG+DH +D
Sbjct: 78  KELGHSYEEEISLLFIHAMLHLLGFDHEND 107


>gi|322420984|ref|YP_004200207.1| hypothetical protein GM18_3497 [Geobacter sp. M18]
 gi|320127371|gb|ADW14931.1| protein of unknown function UPF0054 [Geobacter sp. M18]
          Length = 121

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS+       I  LN EY G DK TNV+SF          +  +LGD+V++ +    E
Sbjct: 6   AELSISIVGDRAIRVLNREYLGRDKATNVISFAMQEGEFGSVNPDLLGDVVVSVDTAARE 65

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDD--KDACVMEGLERSIL 159
           A   G+ F + L  L++HG LH+ G+DH      +A  ME  ER I 
Sbjct: 66  AEEGGETFLSRLYFLVLHGILHITGFDHERSGVAEAARMEAKEREIF 112


>gi|220912722|ref|YP_002488031.1| metalloprotease [Arthrobacter chlorophenolicus A6]
 gi|254801508|sp|B8H8R4|RRMF_ARTCA RecName: Full=Probable rRNA maturation factor
 gi|219859600|gb|ACL39942.1| protein of unknown function UPF0054 [Arthrobacter chlorophenolicus
           A6]
          Length = 157

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP--TNVLSFP----TAFAS 92
           A+S  I +  ++     ELS++  D   +E L+ E   +D+P  T+VLS P    T    
Sbjct: 20  ALSRYIFEQLYIHPQ-AELSILLVDEPAMEKLHIEL--MDEPGATDVLSVPMDDLTPGTP 76

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  MLGDI +  ++ +++A   G   ++ ++ L  HG LHLLGYDH + ++   M 
Sbjct: 77  DRPTPQGMLGDIAICPQVAQVQAKNAGHALQDEMLLLTTHGILHLLGYDHAEPEEKEEMF 136

Query: 153 GLERSIL 159
           GL+R +L
Sbjct: 137 GLQRELL 143


>gi|153952235|ref|YP_001397375.1| putative metalloprotease [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939681|gb|ABS44422.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 135

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LVF DS  ++ +N E R  DK T+VLSFP          SL LG +V+  ++ + +A
Sbjct: 22  DVELVFVDSKEMQEINLEQRKQDKTTDVLSFPLENIDE----SLPLGSVVINVDLAKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             LG  +E  +  L IH  LHLLG+DH +D
Sbjct: 78  KELGHSYEEEISLLFIHAMLHLLGFDHEND 107


>gi|238060558|ref|ZP_04605267.1| metalloprotease [Micromonospora sp. ATCC 39149]
 gi|237882369|gb|EEP71197.1| metalloprotease [Micromonospora sp. ATCC 39149]
          Length = 157

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP---------TAFASSDGCSSLMLGDI 104
           + ELS++  D   +  LN  + G D PT+VL+FP            +S+ G    +LGDI
Sbjct: 34  LAELSVLLVDIDYMTELNHRWMGGDGPTDVLAFPMDEGSVDHGPGESSAAGGEPALLGDI 93

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           VL  E+   +A   G    + L  L +HG LHLLGYDH 
Sbjct: 94  VLCPEVAAKQAATAGHSSADELHLLTVHGVLHLLGYDHA 132


>gi|296333310|ref|ZP_06875763.1| putative metalloprotease [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675185|ref|YP_003866857.1| putative metalloprotease [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149508|gb|EFG90404.1| putative metalloprotease [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413429|gb|ADM38548.1| putative metalloprotease [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 157

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           +N  E+S+    +  I+ +N EYRG D PT+V+SF            +      +LGDI+
Sbjct: 36  QNQAEVSVTIVTNEDIQQINKEYRGKDTPTDVISFALEEEGEGEVEIVGAEMPPVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +    +A      F+  L  L +HGFLHLLGYDH+  ++   M   ++ +L+  G+ 
Sbjct: 96  ISADRTREQAEEYNHSFKRELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKDLLDAYGLK 155


>gi|13358053|ref|NP_078327.1| hypothetical protein UU490 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|167971447|ref|ZP_02553724.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           6 str. ATCC 27818]
 gi|170762010|ref|YP_001752574.1| hypothetical protein UPA3_0508 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|29428267|sp|Q9PQ00|RRMF_UREPA RecName: Full=Probable rRNA maturation factor
 gi|189040230|sp|B1AJD0|RRMF_UREP2 RecName: Full=Probable rRNA maturation factor
 gi|11356818|pir||A82884 conserved hypothetical UU490 [imported] - Ureaplasma urealyticum
 gi|6899488|gb|AAF30902.1|AE002147_3 conserved hypothetical [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827587|gb|ACA32849.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           3 str. ATCC 27815]
 gi|186701087|gb|EDU19369.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           6 str. ATCC 27818]
          Length = 155

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           F D   I+ +N  YR  D  T+V+SF  AF   +  + L LG++ + Y+ +  +A+    
Sbjct: 45  FVDEKTIQEINKNYRNKDYITDVISF--AFDDGEIITPL-LGEMYICYQKVVDQASQFAH 101

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            FE  L  L  HG LHLLGYDH+  +D  +M  L+  IL +L I
Sbjct: 102 SFERELCFLFTHGLLHLLGYDHIKIEDEKIMFALQDEILNELKI 145


>gi|169632397|ref|YP_001706133.1| hypothetical protein ABSDF0477 [Acinetobacter baumannii SDF]
 gi|238688242|sp|B0VQX0|RRMF_ACIBS RecName: Full=Probable rRNA maturation factor
 gi|169151189|emb|CAO99866.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 158

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 66/117 (56%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D      LN +YR  DKPTN LSFP+           +L LGD+V+   ++  
Sbjct: 41  EIGIACVDLEESHQLNLQYREKDKPTNALSFPSDIPEEVLPMLDALPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  +NH  HL++HG LHLLGYDH   D+DA  MEGLE  IL  L I +PY+
Sbjct: 101 EALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEMEGLEIEILAKLNIANPYQ 157


>gi|166031812|ref|ZP_02234641.1| hypothetical protein DORFOR_01513 [Dorea formicigenerans ATCC
           27755]
 gi|166028265|gb|EDR47022.1| hypothetical protein DORFOR_01513 [Dorea formicigenerans ATCC
           27755]
          Length = 164

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 15/125 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------TAFASSDGC-----SSL 99
           V+++L+ T +  I  +N ++R ID+ T+VLSFP          + F S + C       L
Sbjct: 38  VQVNLLLTMNDEIHEMNRDFRNIDRATDVLSFPMLEYETPGDFSHFESEEDCFDPETGEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDIV++ E +  +A   G   +     LI H  LHL GYDH+++++   ME L+R IL
Sbjct: 98  LLGDIVISKEKVIAQAEEYGHSVKREYAFLIAHSVLHLSGYDHMEEEERIEMETLQREIL 157

Query: 160 EDLGI 164
            +L I
Sbjct: 158 NELNI 162


>gi|154504368|ref|ZP_02041106.1| hypothetical protein RUMGNA_01872 [Ruminococcus gnavus ATCC 29149]
 gi|153795297|gb|EDN77717.1| hypothetical protein RUMGNA_01872 [Ruminococcus gnavus ATCC 29149]
          Length = 165

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 18/146 (12%)

Query: 37  AKAVSNLISKGYFVKENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----- 88
            K V++L+ +     E      E++L+ T    I  +N E+R ID+ T+VLSFP      
Sbjct: 17  TKEVADLVVEAALEYEGCPYEAEINLLLTTDDEIHRMNEEFRQIDRATDVLSFPMLEYET 76

Query: 89  ----------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
                     A A +     LMLGDIV++ E +  +A   G   +     LI H  LHL 
Sbjct: 77  PGDFSFVEEEAEAFNPESGELMLGDIVISKEKVLAQAEAYGHSPKREFAFLIAHSMLHLF 136

Query: 139 GYDHVDDKDACVMEGLERSILEDLGI 164
           GYDH+++++  VME  +R I+E + I
Sbjct: 137 GYDHMEEEERLVMEERQREIMEKVQI 162


>gi|295838976|ref|ZP_06825909.1| metalloprotease [Streptomyces sp. SPB74]
 gi|197695531|gb|EDY42464.1| metalloprotease [Streptomyces sp. SPB74]
          Length = 165

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D   +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVILVDGPAMEQLHVQWMDLPGPTDVMSFPMDELRPPVKDDEQPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+ E +      E   +  L  L +HG LHLLGYDH +  +   M GL+++I++
Sbjct: 94  EVAERQGREAPTEHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQQAIVD 147


>gi|260549789|ref|ZP_05824005.1| metal-dependent hydrolase [Acinetobacter sp. RUH2624]
 gi|260407039|gb|EEX00516.1| metal-dependent hydrolase [Acinetobacter sp. RUH2624]
          Length = 158

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D      LN +YR  DKPTNVLSFP+           +L LGD+V+   ++  
Sbjct: 41  EIGVACVDLEESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  +NH  HL++HG LHLLGYDH + D+DA  ME LE  IL  L I +PY+
Sbjct: 101 EALEQKKTAQNHFAHLLVHGVLHLLGYDHEISDEDAEEMESLEIEILAKLNIANPYQ 157


>gi|255027003|ref|ZP_05298989.1| putative metalloprotease [Listeria monocytogenes FSL J2-003]
          Length = 138

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 10/106 (9%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSDGCS 97
           Y   E   ELSL FT +  I  +N EYR  D+ T+V+SF             +   D  +
Sbjct: 33  YLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLET 92

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
             MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH+
Sbjct: 93  PRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHM 138


>gi|302545480|ref|ZP_07297822.1| putative metalloprotease [Streptomyces hygroscopicus ATCC 53653]
 gi|302463098|gb|EFL26191.1| putative metalloprotease [Streptomyces himastatinicus ATCC 53653]
          Length = 165

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELSL+  D+  +E L+ ++  +  PT+V+SFP           D     +LGDIVL  
Sbjct: 34  LSELSLIVVDADAMEQLHIQWMDLPGPTDVMSFPMDELRPPVKDDDEPPQGLLGDIVLCP 93

Query: 109 EII--EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           ++   + E    G   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  DVAKKQGEEAPTGHSMDEELQLLTVHGVLHLLGYDHEEPDERAEMFGLQAAIID 147


>gi|296119867|ref|ZP_06838421.1| putative metalloprotease [Corynebacterium ammoniagenes DSM 20306]
 gi|295967021|gb|EFG80292.1| putative metalloprotease [Corynebacterium ammoniagenes DSM 20306]
          Length = 191

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 9/116 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP---------TAFASSDGCSSLMLGDIV 105
           VEL++   D   IE L+  +  ++ PT+V+SFP         T    +      MLGDIV
Sbjct: 36  VELTMTCVDLETIEELHVRWMDLEGPTDVMSFPIDEITPGAMTPRPDAPDMGPAMLGDIV 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           L     E +A+  G    + L  L  HG LHLLGYDH    +   M  L+  +L D
Sbjct: 96  LCPAFAERQADAAGHSLSHELALLTTHGCLHLLGYDHGTPSEEQEMFALQNELLAD 151


>gi|29832127|ref|NP_826761.1| putative metalloprotease [Streptomyces avermitilis MA-4680]
 gi|46577428|sp|Q82BX0|RRMF_STRAW RecName: Full=Probable rRNA maturation factor
 gi|29609245|dbj|BAC73296.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 165

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           D     +LGDIVL  
Sbjct: 34  LSELSVIVVDADAMEQLHIQWMDLPGPTDVMSFPMDELRPPMKDDDEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+ E +      +   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAERQGKEAPTQHSMDEELQLLAVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|302877838|ref|YP_003846402.1| hypothetical protein Galf_0596 [Gallionella capsiferriformans ES-2]
 gi|302580627|gb|ADL54638.1| protein of unknown function UPF0054 [Gallionella capsiferriformans
           ES-2]
          Length = 153

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 34  VVFAKAVSNLISKGYFVK------ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           V +  A  NL ++  + +      +  V L+L   D      LN  YRG D  TNVL+F 
Sbjct: 16  VQYVSAAQNLPARPQWRRWIKAALQRDVSLALRIVDEAEGRELNKAYRGRDYATNVLTF- 74

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             +   D  S    GD+V+   ++  EA    K+   H  HL IH  LHL GYDH  D +
Sbjct: 75  -VYDEDDHLS----GDVVICAPVVAREATEQDKDLLTHYAHLAIHAALHLQGYDHEVDAE 129

Query: 148 ACVMEGLERSILEDLGINDPYE 169
           A  ME LE +++  LG  DPY+
Sbjct: 130 AEEMEALETALMLKLGYPDPYK 151


>gi|15644257|ref|NP_229309.1| hypothetical protein TM1509 [Thermotoga maritima MSB8]
 gi|6686214|sp|Q9X1J7|RRMF_THEMA RecName: Full=Probable rRNA maturation factor
 gi|4982075|gb|AAD36576.1|AE001799_8 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 150

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 11/139 (7%)

Query: 28  LRTLCEVVFAKAVSNLISK-GYFVKENI--VELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +R L E   +K + NL  K    VK+ I  V ++++      I+ LN ++RG D+PT+VL
Sbjct: 2   IRILGEGKGSKLLENLKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRGQDRPTDVL 61

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-V 143
           +FP            + G+I +   I+E  A      FE  L+ ++IHG LHL GYDH  
Sbjct: 62  TFPL-------MEEDVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEF 114

Query: 144 DDKDACVMEGLERSILEDL 162
           +DK++  M   ++  +E++
Sbjct: 115 EDKNSKEMFEKQKKYVEEV 133


>gi|256825018|ref|YP_003148978.1| hypothetical protein Ksed_11740 [Kytococcus sedentarius DSM 20547]
 gi|256688411|gb|ACV06213.1| conserved hypothetical protein TIGR00043 [Kytococcus sedentarius
           DSM 20547]
          Length = 166

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 9/127 (7%)

Query: 42  NLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFAS 92
           ++++   F  + +      EL + F D+  IE L+ ++  +  PT+V+SFP         
Sbjct: 17  DVVAAAQFAMDTLHVNPAAELCIRFVDAAAIEVLHEQWMDLAGPTDVMSFPMDELRPGTP 76

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGDIVL   +   +A+ LG      L+ L +HG LHLLGYDH D  D   M 
Sbjct: 77  ERPSEPGVLGDIVLCPTVAAEQASRLGHPVGEELLMLTVHGVLHLLGYDHADPDDEREMF 136

Query: 153 GLERSIL 159
            L+  +L
Sbjct: 137 TLQAELL 143


>gi|75908994|ref|YP_323290.1| putative metalloprotease [Anabaena variabilis ATCC 29413]
 gi|123609226|sp|Q3M9E1|RRMF_ANAVT RecName: Full=Probable rRNA maturation factor
 gi|75702719|gb|ABA22395.1| Protein of unknown function UPF0054 [Anabaena variabilis ATCC
           29413]
          Length = 176

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-----CSSLMLGDIVLAYEI 110
           E+ L  TD   I+ +N +YR  +KPT+VL+F    A            L LGDIV++   
Sbjct: 57  EIGLRLTDDTEIQAINAQYRQQNKPTDVLAFAALEADLPQNPEMVAEPLYLGDIVVSINT 116

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + +A          L  L  HG LHLLG+DH D++    M   +  +L+ +GI 
Sbjct: 117 AQRQAGQQEHSLSTELAWLTAHGLLHLLGWDHPDEESLIAMLQQQVVLLDAVGIK 171


>gi|159902741|ref|YP_001550085.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9211]
 gi|238687124|sp|A9BD43|RRMF_PROM4 RecName: Full=Probable rRNA maturation factor
 gi|159887917|gb|ABX08131.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9211]
          Length = 189

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           ALW   + +     + + +   N +        N + + L FTD   I  +N ++R  ++
Sbjct: 35  ALWRSNLKVW----IDYVRRNDNYLCPAIVRSVNCLSIGLQFTDDKSIMKINQQWRAKEE 90

Query: 80  PTNVLSFPTAFASSDGCSS---LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           PT+VLSFP     S        L LGDI+++ +  + +A+      +  L  L+ HG LH
Sbjct: 91  PTDVLSFPVIDQDSIAPPPNHFLELGDIIVSVQTAQKQADENNHSLDKELCWLVSHGLLH 150

Query: 137 LLGYDHVDDKDACVMEGLERSILE 160
           LLG+DH+++     M   +  +L+
Sbjct: 151 LLGWDHLNEHSLDQMLSFQDKLLQ 174


>gi|304373107|ref|YP_003856316.1| Putative metalloprotease [Mycoplasma hyorhinis HUB-1]
 gi|304309298|gb|ADM21778.1| Putative metalloprotease [Mycoplasma hyorhinis HUB-1]
 gi|330723268|gb|AEC45638.1| Putative metalloprotease [Mycoplasma hyorhinis MCLD]
          Length = 150

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 7/92 (7%)

Query: 57  LSLVFT--DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL---MLGDIVLAYEII 111
           LSL FT  D  ++    F+Y+G D+ T++LSFP  F +S   S +    LG+I+++Y+ I
Sbjct: 38  LSLDFTLIDDEQMRKYYFQYKGKDRTTDILSFP--FVNSFSTSFMKEKFLGEILISYQKI 95

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           + +A   G        +L  HG  HLLGYDH+
Sbjct: 96  QQQAKEYGHSVTREFCYLFTHGVYHLLGYDHI 127


>gi|220702590|pdb|1TVI|A Chain A, Solution Structure Of Tm1509 From Thermotoga Maritima:
           Vt1, A Nesgc Target Protein
          Length = 172

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 11/139 (7%)

Query: 28  LRTLCEVVFAKAVSNLISK-GYFVKENI--VELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +R L E   +K + NL  K    VK+ I  V ++++      I+ LN ++RG D+PT+VL
Sbjct: 24  IRILGEGKGSKLLENLKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRGQDRPTDVL 83

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-V 143
           +FP            + G+I +   I+E  A      FE  L+ ++IHG LHL GYDH  
Sbjct: 84  TFPL-------MEEDVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEF 136

Query: 144 DDKDACVMEGLERSILEDL 162
           +DK++  M   ++  +E++
Sbjct: 137 EDKNSKEMFEKQKKYVEEV 155


>gi|15828849|ref|NP_326209.1| hypothetical protein MYPU_3780 [Mycoplasma pulmonis UAB CTIP]
 gi|46577539|sp|Q98QI3|RRMF_MYCPU RecName: Full=Probable rRNA maturation factor
 gi|14089792|emb|CAC13551.1| conserved hypothetical protein [Mycoplasma pulmonis]
          Length = 149

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           + R + +  F K +  +  K  F K   + + L+ TD+  +   N  YR +DK T+VLSF
Sbjct: 11  NFRFMYKKEFLKIMDIIQEKFNFKKR--ISVDLLITDNKEVRENNLLYRNVDKETDVLSF 68

Query: 87  PTAFASSDGCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           P  F   D    L    LG I++++E I  +A       +    +L  H  LHLLGYDH 
Sbjct: 69  P--FGDPDFFDHLDFIPLGSIIISHEKIVAQALEFNHSKKREFCYLFTHSLLHLLGYDHK 126

Query: 144 DDKDACVMEGLERSILEDLGI 164
           ++ +  +M    + I+E L I
Sbjct: 127 EEDEEKIMNQYTKEIVEKLNI 147


>gi|255525314|ref|ZP_05392254.1| protein of unknown function UPF0054 [Clostridium carboxidivorans
           P7]
 gi|255510986|gb|EET87286.1| protein of unknown function UPF0054 [Clostridium carboxidivorans
           P7]
          Length = 120

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 17/112 (15%)

Query: 66  RIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GCSSLMLGDIVLAY 108
           +I+ +N E R IDK T+VLSFP                  F+  D    SL+LGDIVL+ 
Sbjct: 3   KIKEINKENRNIDKVTDVLSFPMLDYEKGKVFKDTYKDFNFSHVDLDEGSLVLGDIVLSL 62

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E  + ++      F   +V+L IH  LHLLGYDH+++ +  +M   E  ILE
Sbjct: 63  EKAKEQSLEFNHSFIREVVYLTIHSVLHLLGYDHMEEDEKSIMRKREEQILE 114


>gi|116515199|ref|YP_802828.1| YbeY [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|122285405|sp|Q057G4|RRMF_BUCCC RecName: Full=Probable rRNA maturation factor
 gi|116257053|gb|ABJ90735.1| predicted metal-dependent hydrolase [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 156

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 3/147 (2%)

Query: 25  EIHLRTLCE--VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           +I ++ +C+  + F K     +      K   +E+++   D   ++ LN +Y+  +  TN
Sbjct: 9   KIDIQNVCKKNIFFPKKKYFFLWLKNIFKNKKIEITIRIVDMLEMKFLNKKYKKKNSLTN 68

Query: 83  VLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           VLSF +  +       L  +GDI+L    I  EAN+L K+      H+ IH  LHLL Y 
Sbjct: 69  VLSFQSPDSIKIKHRFLNYIGDIILCAPYINKEANILKKKKIELWAHMTIHSTLHLLHYS 128

Query: 142 HVDDKDACVMEGLERSILEDLGINDPY 168
           H D K    M+  E  I++ LG N+PY
Sbjct: 129 HKDSKSKKNMQKTEIYIMKKLGYNNPY 155


>gi|315226507|ref|ZP_07868295.1| metalloprotease [Parascardovia denticolens DSM 10105]
 gi|315120639|gb|EFT83771.1| metalloprotease [Parascardovia denticolens DSM 10105]
          Length = 175

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   +  L+  +  ++ PT+V+SFP       +       MLGDI+L  E+  
Sbjct: 39  DLSIAFIDPAPMAELHLRWMNLEGPTDVMSFPMDELRPGTETDRDEGMLGDIILCPEVAA 98

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +D   M G++R +L
Sbjct: 99  DQAAAAGHSTIEEMMLLTIHGVLHLLGYDHATPEDEKRMFGIQRQLL 145


>gi|85859387|ref|YP_461589.1| metal-dependent hydrolase [Syntrophus aciditrophicus SB]
 gi|123516585|sp|Q2LTL4|RRMF_SYNAS RecName: Full=Probable rRNA maturation factor
 gi|85722478|gb|ABC77421.1| predicted metal-dependent hydrolase [Syntrophus aciditrophicus SB]
          Length = 160

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 11/151 (7%)

Query: 5   KVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           K    R+ + IA+ N     +I LR +      + V  L+     V     E+SL+F D 
Sbjct: 2   KRAFERMSMAIAIRNQQKKVKIDLRQI-----RRRVQKLLR---LVDCREKEISLLFVDD 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
             I+ +N  Y G + PTNV+SF  +       +  +LGDIV++ +    +A        +
Sbjct: 54  EEIQEINQRYLGRNYPTNVISFSLSEGEFSSVNPDVLGDIVISVDTASRDAERGNIPVSD 113

Query: 125 HLVHLIIHGFLHLLGYDHVD---DKDACVME 152
            L  LIIHG LH+LGY+H +   ++ AC+ +
Sbjct: 114 ELDFLIIHGLLHILGYNHENNNPEETACMQK 144


>gi|163848855|ref|YP_001636899.1| hypothetical protein Caur_3323 [Chloroflexus aurantiacus J-10-fl]
 gi|222526810|ref|YP_002571281.1| hypothetical protein Chy400_3584 [Chloroflexus sp. Y-400-fl]
 gi|189039853|sp|A9WJ51|RRMF_CHLAA RecName: Full=Probable rRNA maturation factor
 gi|254765075|sp|B9LD66|RRMF_CHLSY RecName: Full=Probable rRNA maturation factor
 gi|163670144|gb|ABY36510.1| protein of unknown function UPF0054 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450689|gb|ACM54955.1| protein of unknown function UPF0054 [Chloroflexus sp. Y-400-fl]
          Length = 154

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 15/119 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---------LGDIVL 106
           E+ +  T    +  LN ++RG+D PT+VLSF     + DG  S           LGDI +
Sbjct: 38  EVGIRITTDDELHRLNRDFRGVDAPTDVLSF-----ADDGHDSRFVVAPDQPRYLGDIAI 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGI 164
           +Y+ +  +A   G      L +L +HG LHLLGYDH     +A  M   E  I+  LG+
Sbjct: 93  SYQRVLAQAAEYGHSPARELAYLTVHGVLHLLGYDHEQGPAEAARMRTREEEIMTILGL 151


>gi|294786871|ref|ZP_06752125.1| putative metalloprotease [Parascardovia denticolens F0305]
 gi|294485704|gb|EFG33338.1| putative metalloprotease [Parascardovia denticolens F0305]
          Length = 172

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   +  L+  +  ++ PT+V+SFP       +       MLGDI+L  E+  
Sbjct: 36  DLSIAFIDPAPMAELHLRWMNLEGPTDVMSFPMDELRPGTETDRDEGMLGDIILCPEVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +D   M G++R +L
Sbjct: 96  DQAAAAGHSTIEEMMLLTIHGVLHLLGYDHATPEDEKRMFGIQRQLL 142


>gi|116074016|ref|ZP_01471278.1| hypothetical protein RS9916_36237 [Synechococcus sp. RS9916]
 gi|116069321|gb|EAU75073.1| hypothetical protein RS9916_36237 [Synechococcus sp. RS9916]
          Length = 193

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVL 106
           K ++  L L  TD   I  LN  +R   +PT+VLSF         S D C  L LGDI++
Sbjct: 59  KASMFSLGLQLTDDATIAELNGNWRQKPEPTDVLSFAALEKAPPFSGDPC--LELGDIIV 116

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +      +A   G      L  L+ HGFLHLLG+DH D+     M   +  +L + G+
Sbjct: 117 SVPTARRQATEHGHALLWELRWLVSHGFLHLLGWDHPDEAQLAAMLRRQEQLLNNGGM 174


>gi|312880027|ref|ZP_07739827.1| protein of unknown function UPF0054 [Aminomonas paucivorans DSM
           12260]
 gi|310783318|gb|EFQ23716.1| protein of unknown function UPF0054 [Aminomonas paucivorans DSM
           12260]
          Length = 171

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)

Query: 23  GDEIHLRTLCEVVFAKAV--SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
           G+ +  R  C  V+A+ +     +  G   +E   E+S+ F D + +  LN  YR ++ P
Sbjct: 21  GEALQDRIRC--VWARLLLAEGTLPSGEETRE--AEVSVSFVDPNSMAELNRTYRQVEGP 76

Query: 81  TNVLSFPTAFASSDGCSS----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           T+VLSFP        C      L LGD+V+  + ++ +    G   E  ++ ++ HGFLH
Sbjct: 77  TDVLSFPLWEEEGRFCPPPWEVLPLGDVVICPDQVQPQEG--GGSKERQMLLVLHHGFLH 134

Query: 137 LLGYDH-VDDKDACVMEGLERSILEDLGIN 165
           LLG+DH    K+  + E  ER + + L  N
Sbjct: 135 LLGWDHDTPQKEQDMWELQERMVSDTLEGN 164


>gi|168023436|ref|XP_001764244.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684684|gb|EDQ71085.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 268

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAY 108
           F + + VELS++     RI  LN E+R  D PT+VLSF  +     G    +LGD+V++ 
Sbjct: 153 FDQSDTVELSVLLCSDSRIRELNKEWRRKDSPTDVLSF--SQDQPAGSPLTLLGDLVISV 210

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           E    +A   G    + L  L +HG LH+L YDH
Sbjct: 211 ETAARQAEERGHTLIDELRILFVHGLLHVLDYDH 244


>gi|304316656|ref|YP_003851801.1| hypothetical protein Tthe_1198 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778158|gb|ADL68717.1| protein of unknown function UPF0054 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 162

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 13/117 (11%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFP-------------TAFASSDGCSSLMLGDIVLA 107
           F D+  I  LN  YR +D+ T+VLSFP               +   D      +GDIV++
Sbjct: 44  FVDNEEIHKLNKYYRNVDRETDVLSFPLVEFEEIYSDIDEENYDEDDAAGPEPIGDIVIS 103

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            E  + +A   G  F   + +L  H   HL+GYDH  D +  +M   E  ++  L I
Sbjct: 104 LEKAKQQAEEYGHSFIREVAYLTAHSMFHLMGYDHETDDERKIMREKEDEVMRRLKI 160


>gi|296393920|ref|YP_003658804.1| hypothetical protein Srot_1510 [Segniliparus rotundus DSM 44985]
 gi|296181067|gb|ADG97973.1| protein of unknown function UPF0054 [Segniliparus rotundus DSM
           44985]
          Length = 180

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 6/112 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAY 108
            ELS++  D+  +  L+ ++  +  PT+VLSFP   A  DG       +  +LGDIVL  
Sbjct: 35  AELSMLLVDTTTMAHLHQQWMNLPGPTDVLSFPMDDAEPDGRPDAVEAAQTLLGDIVLCP 94

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+   +A   G   E+ ++ L +HG LH+LGYDH + ++   M  L+  +++
Sbjct: 95  EVAAEQAEAAGHSAEHEMIVLTVHGVLHILGYDHAEPEEEAEMFALQGKLVD 146


>gi|293376336|ref|ZP_06622573.1| metalloprotein, YbeY family [Turicibacter sanguinis PC909]
 gi|325843425|ref|ZP_08167983.1| translation metalloprotein YbeY [Turicibacter sp. HGF1]
 gi|292645025|gb|EFF63098.1| metalloprotein, YbeY family [Turicibacter sanguinis PC909]
 gi|325489347|gb|EGC91721.1| translation metalloprotein YbeY [Turicibacter sp. HGF1]
          Length = 157

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 6/117 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSDGCSSLMLGDIVLAY 108
           +E S +F D+ +I  +N  YR  D  T+V++F      P            MLGD+ ++ 
Sbjct: 40  IECSFIFVDNEQIREINANYRQKDAVTDVITFAIEDETPGEIKIQGVPMPRMLGDVFISL 99

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                +A   G  F+  L  L +HG LHLLGYDH+  ++  +M   +  +L  LGI 
Sbjct: 100 PRTREQAERFGHSFDRELSFLAVHGCLHLLGYDHLVKEEEEIMFAKQEDVLNALGIR 156


>gi|154686792|ref|YP_001421953.1| putative metalloprotease [Bacillus amyloliquefaciens FZB42]
 gi|189039682|sp|A7Z6U6|RRMF_BACA2 RecName: Full=Probable rRNA maturation factor
 gi|154352643|gb|ABS74722.1| YqfG [Bacillus amyloliquefaciens FZB42]
          Length = 157

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           ++  E+S+    +  I  +N +YRG D PT+V+SF       D    +      +LGDI+
Sbjct: 36  QDQAEVSVTIVTNEEIREINRDYRGKDTPTDVISFALEEEGEDEVEIVGADMPPVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +  + +A   G  F   L  L +HGFLHLLGYDH+  ++   M   ++ +L++ G+ 
Sbjct: 96  ISADRTKEQAEEYGHSFMRELGFLAVHGFLHLLGYDHMTKEEEEEMFSKQKDLLDEYGLT 155


>gi|308513315|ref|NP_953333.3| hypothetical protein GSU2284 [Geobacter sulfurreducens PCA]
 gi|39984273|gb|AAR35660.1| conserved hypothetical protein TIGR00043 [Geobacter sulfurreducens
           PCA]
          Length = 114

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+V T    I  +N +Y G D+PTNV+SF          +  +LGD++++ +    EA 
Sbjct: 1   MSVVITGDLGIRRVNRDYLGKDRPTNVISFAMGEGDFGDLNPDVLGDVIISADTAAREAE 60

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSIL 159
             G  F + L  L++HG LH+ GYDH    + +A  ME  ER I 
Sbjct: 61  EAGIAFWSRLCFLLLHGTLHITGYDHERSGEAEARRMEAKEREIF 105


>gi|282899045|ref|ZP_06307026.1| protein of unknown function UPF0054 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195961|gb|EFA70877.1| protein of unknown function UPF0054 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 174

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 6/115 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSD---GCSSLMLGDIVLAYE 109
           E+ L  T+  +I+ LN +YR  D+PT+VL+F      F  ++       L LGDIV++ +
Sbjct: 56  EIGLQLTNDAQIQELNAQYRQKDQPTDVLAFAALENNFPYTEEMLASQPLYLGDIVISID 115

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
               +A          L  L  HG LHLLG+DH D++    M   +  +L+ +GI
Sbjct: 116 TAICQAQEREHNLTTELAWLSAHGLLHLLGWDHPDEQSLIEMLNKQSMLLKSVGI 170


>gi|311069133|ref|YP_003974056.1| putative metalloprotease [Bacillus atrophaeus 1942]
 gi|310869650|gb|ADP33125.1| putative metalloprotease [Bacillus atrophaeus 1942]
          Length = 157

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           ++  E+S+    +  I+ +N EYRG D PT+V+SF       D    +      +LGDI+
Sbjct: 36  QDQAEVSVTIVTNDEIQQINKEYRGKDTPTDVISFALEEEGEDEVEIVGAEMPPVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +    +A   G  F   L  L +HGFLHLLGYDH+  +    M   ++ +L++ G+ 
Sbjct: 96  ISADRTREQAEEYGHSFLRELGFLAVHGFLHLLGYDHMTKEQEEEMFTKQKDLLDNYGLT 155


>gi|124515714|gb|EAY57223.1| conserved protein of unknown function [Leptospirillum rubarum]
          Length = 169

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 2/107 (1%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +++ F ++ RI  +N EYRG ++ T+VLSF +  +          G+I+++ E  E +A 
Sbjct: 37  VTITFVNNRRIRIVNREYRGKNRSTDVLSF-SYPSPPFPDIPFPDGEILISTEKAERQAR 95

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
                 E  +V+LIIHG  HL G+DH    +DA  M+  ER I + L
Sbjct: 96  EQNIPLETEIVNLIIHGLCHLAGHDHETGPEDALRMKHAERKIAKTL 142


>gi|330836438|ref|YP_004411079.1| metalloprotease ybeY [Spirochaeta coccoides DSM 17374]
 gi|329748341|gb|AEC01697.1| metalloprotease ybeY [Spirochaeta coccoides DSM 17374]
          Length = 153

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 7/125 (5%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           G E+   +  E V    +S ++S      EN VE+S  F     I  LN E+R  D+ T+
Sbjct: 11  GQEMFKESYPEDVILDRISGILSD--LGLEN-VEMSCSFVSDEEIRRLNAEWRDRDESTD 67

Query: 83  VLSF----PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           +LSF      A  S+DG    MLGD+V++ E ++  +       +  L  L++HG LHLL
Sbjct: 68  ILSFVQEDGEAMPSADGNEWRMLGDLVISPESLKRNSEYFTVSLDEELHRLLVHGMLHLL 127

Query: 139 GYDHV 143
           G DH 
Sbjct: 128 GDDHA 132


>gi|116327964|ref|YP_797684.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330845|ref|YP_800563.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281401|sp|Q04TG5|RRMF_LEPBJ RecName: Full=Probable rRNA maturation factor
 gi|122284244|sp|Q052J4|RRMF_LEPBL RecName: Full=Probable rRNA maturation factor
 gi|116120708|gb|ABJ78751.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124534|gb|ABJ75805.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 143

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 24/125 (19%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
           C ++F K +          K+   EL L+      +  +N   RG DK T+VLSFP  F 
Sbjct: 5   CGILFRKEL----------KDFPCELGLLLVGDSDMRKINRLRRGKDKTTDVLSFPLEFD 54

Query: 92  S--------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           S              S+    + LG+IV++ + +E +A  +G   ++    L++HGFLHL
Sbjct: 55  SAPLQNVLQKRTGFDSNSLPPIALGEIVISVDTLEKQAVEIGHSVKDEFYRLLVHGFLHL 114

Query: 138 LGYDH 142
           LGYDH
Sbjct: 115 LGYDH 119


>gi|269218582|ref|ZP_06162436.1| putative metalloprotease [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211693|gb|EEZ78033.1| putative metalloprotease [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 164

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            EL+++F D   +  L+ E+  +D PT+VLSFP          +     +LGDIV+  ++
Sbjct: 37  AELNVLFEDEESMARLHVEWMDLDGPTDVLSFPMDELRPAPIGEEPREGVLGDIVVCPQV 96

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L+ HG LHLLGYDH ++ +   M  L+R +L
Sbjct: 97  AARQAYTAGHAVAEEVLLLVTHGILHLLGYDHAEEDERREMFDLQRQLL 145


>gi|210633814|ref|ZP_03297861.1| hypothetical protein COLSTE_01778 [Collinsella stercoris DSM 13279]
 gi|210159074|gb|EEA90045.1| hypothetical protein COLSTE_01778 [Collinsella stercoris DSM 13279]
          Length = 169

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 11/159 (6%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSN--LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           L  ++  L TL E    +A++   L S+G   +   VE+SL + D   +  LN E+RGID
Sbjct: 4   LISNDAELPTLIEEDEVRAIAAHVLASEGVARE---VEISLSYVDEDEMHELNREWRGID 60

Query: 79  KPTNVLSFP--TAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           + T+VLSF   +AF        ++ LGD++LA E+I  +A   G    +    +++HG L
Sbjct: 61  RTTDVLSFECDSAFDEDIPVDEIVELGDVILAPEVIARQAPGFGNSAADECRLMLVHGLL 120

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGI---NDPYEVD 171
           HLLGYDH++D +A VME  E ++L +L +    DP  ++
Sbjct: 121 HLLGYDHIEDDEAEVMEAREDALLRELAVMRGEDPSRIE 159


>gi|225021772|ref|ZP_03710964.1| hypothetical protein CORMATOL_01800 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305681061|ref|ZP_07403868.1| translation metalloprotein YbeY [Corynebacterium matruchotii ATCC
           14266]
 gi|224945468|gb|EEG26677.1| hypothetical protein CORMATOL_01800 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305659266|gb|EFM48766.1| translation metalloprotein YbeY [Corynebacterium matruchotii ATCC
           14266]
          Length = 205

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVLA 107
            E+++   D   +  L+  + G++ PT+V+SFP            S G    MLGDI+L 
Sbjct: 36  AEVTVSVVDVPTMSELHLRWMGLEGPTDVMSFPMDELTPNMGRPDSAGFGPAMLGDIILC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            E    +A   G +  + L  L  HG LHLLGYDH+  +    M  L+  +L D
Sbjct: 96  PEFAHKQATKAGHDLGHELCLLTTHGCLHLLGYDHITPEQEQKMFALQNELLMD 149


>gi|227495126|ref|ZP_03925442.1| metalloprotease [Actinomyces coleocanis DSM 15436]
 gi|226831578|gb|EEH63961.1| metalloprotease [Actinomyces coleocanis DSM 15436]
          Length = 169

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEI 110
            EL+L+F +   +E L+ ++  +  PT+V+SFP                 LGDIV+   +
Sbjct: 35  AELALMFIEPEPMEELHIKWMDLPGPTDVMSFPMDELRPGTPGRVTPPGTLGDIVICPTV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L +HG LHLLGYDHV+ ++  VM  L+R +L
Sbjct: 95  AAAQALKAGHSAAEEMLLLTVHGVLHLLGYDHVEPEEEKVMFELQRKLL 143


>gi|271963824|ref|YP_003338020.1| hypothetical protein Sros_2296 [Streptosporangium roseum DSM 43021]
 gi|270506999|gb|ACZ85277.1| protein of unknown function UPF0054 [Streptosporangium roseum DSM
           43021]
          Length = 160

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------AFASSDG---CSSLMLG 102
           + ELS++  D   +  L+ ++ G   PT+VLSFP         + A  +G       +LG
Sbjct: 34  LAELSILIVDEEAMAVLHEQWMGEPGPTDVLSFPMDELRPGPGSGARQEGDAPTDPALLG 93

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           D+VL  ++   +A   G   E  L  L  HG LHLLGYDH + ++   M GL+  +LE
Sbjct: 94  DVVLCPQVAAKQAAEAGHSTEAELELLCTHGILHLLGYDHAEPEEHKEMFGLQGELLE 151


>gi|298493060|ref|YP_003723237.1| hypothetical protein Aazo_4995 ['Nostoc azollae' 0708]
 gi|298234978|gb|ADI66114.1| protein of unknown function UPF0054 ['Nostoc azollae' 0708]
          Length = 178

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP---TAFASSD---GCSSLMLGDIVLAYE 109
           E+ L  T+  +I+ LN +YR  +KPT+VL+F    T F  S+       L LGDI+++ +
Sbjct: 58  EIGLRLTNDTQIQELNAQYRQENKPTDVLAFASLETDFPQSEEMLASQPLYLGDIIVSLD 117

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
               +A          L  L  HG LHL+G+DH D++   +ME L++ ++
Sbjct: 118 TGNRQAQQQEHSLTTELAWLTAHGLLHLVGWDHPDEE--SLMEMLKQQVI 165


>gi|308189661|ref|YP_003922592.1| transcriptional regulator [Mycoplasma fermentans JER]
 gi|319776821|ref|YP_004136472.1| putative metalloprotease [Mycoplasma fermentans M64]
 gi|307624403|gb|ADN68708.1| putative transcriptional regulator [Mycoplasma fermentans JER]
 gi|318037896|gb|ADV34095.1| Putative metalloprotease [Mycoplasma fermentans M64]
          Length = 151

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 3/138 (2%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + L E  + + + NL  +  F     V + +  T++  I+ LN EYR  D PT++LSF  
Sbjct: 13  KFLFEKEYKQILENLAKE--FGLNQTVSVDVTITNNDEIQKLNKEYRNKDYPTDILSFGL 70

Query: 89  A-FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             +   +      LG++V+++E +E +A   G        +L  HG +HL+GYDH  + +
Sbjct: 71  EDWELFENMPIYPLGELVISHEKVEAQAQEFGHSIRREYCYLFAHGLIHLMGYDHETEVE 130

Query: 148 ACVMEGLERSILEDLGIN 165
              M  L   I E L I+
Sbjct: 131 RAEMNKLVDLIFEPLKIS 148


>gi|308174320|ref|YP_003921025.1| metal-dependent hydrolase [Bacillus amyloliquefaciens DSM 7]
 gi|307607184|emb|CBI43555.1| putative metal-dependent hydrolase [Bacillus amyloliquefaciens DSM
           7]
 gi|328554267|gb|AEB24759.1| metal-binding heat shock protein [Bacillus amyloliquefaciens TA208]
 gi|328912664|gb|AEB64260.1| putative metal-dependent hydrolase [Bacillus amyloliquefaciens LL3]
          Length = 157

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           ++  E+S+    +  I  +N +YRG D PT+V+SF       D    +      +LGDI+
Sbjct: 36  QDQAEVSVTIVTNDEIREINRDYRGKDTPTDVISFALEEEGEDEVEIVGADMPPVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +  + +A   G  F   L  L +HGFLHLLGYDH+  ++   M   ++ +L++ G+ 
Sbjct: 96  ISADRTKEQAEEYGHSFMRELGFLAVHGFLHLLGYDHMTKEEEEEMFSKQKDLLDEYGLT 155


>gi|302551323|ref|ZP_07303665.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302468941|gb|EFL32034.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 165

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           D     +LGDIVL  
Sbjct: 34  LSELSVIVVDADAMEQLHIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKEFENH------LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+    A   G+E E        L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EV----AQKQGQEAETQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|225389159|ref|ZP_03758883.1| hypothetical protein CLOSTASPAR_02905 [Clostridium asparagiforme
           DSM 15981]
 gi|225044776|gb|EEG55022.1| hypothetical protein CLOSTASPAR_02905 [Clostridium asparagiforme
           DSM 15981]
          Length = 140

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 16/103 (15%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSD--------------GCSS 98
            E++++ TD+  I+ +N E+R ID PT+VLSFP     A SD                  
Sbjct: 38  AEVNVILTDNQAIQEINREHRQIDAPTDVLSFPMVDYEAPSDFDHVEDAVEDYFNPETGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           LMLGDIV++ + +E +A   G      L  L+ H  LHL GYD
Sbjct: 98  LMLGDIVISVDKVEEQAEKYGHSQTRELAFLVAHSMLHLCGYD 140


>gi|57168710|ref|ZP_00367842.1| conserved hypothetical protein TIGR00043 [Campylobacter coli
           RM2228]
 gi|305432662|ref|ZP_07401823.1| probable metalloprotease [Campylobacter coli JV20]
 gi|57019991|gb|EAL56671.1| conserved hypothetical protein TIGR00043 [Campylobacter coli
           RM2228]
 gi|304444373|gb|EFM37025.1| probable metalloprotease [Campylobacter coli JV20]
          Length = 135

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 6/105 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ LVF +S  ++ +N E R  DK T+VLSFP      +   SL LG +V+  ++ + +A
Sbjct: 22  DVELVFVESKEMQEINLEQRKQDKTTDVLSFPL----ENIDESLPLGSVVINVDLAKQKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
             LG  FE  +  L IH  LHLLG+DH  + D   M   E+ ++E
Sbjct: 78  KELGHSFEEEVSLLFIHAMLHLLGFDH--EVDNGEMREKEKELIE 120


>gi|320532466|ref|ZP_08033292.1| conserved hypothetical protein TIGR00043 [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|329946932|ref|ZP_08294344.1| translation metalloprotein YbeY [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|320135319|gb|EFW27441.1| conserved hypothetical protein TIGR00043 [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|328526743|gb|EGF53756.1| translation metalloprotein YbeY [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 152

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSL-MLGDIVLAYEI 110
            EL+++F D   +E L+  +  +  PT+V+SFP       S+D  +    LGDIVL  ++
Sbjct: 35  AELNIMFIDPEPMEELHVRWLDLPGPTDVMSFPMDELRPGSADSPTPAGTLGDIVLCPQV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L +HG LHLLGYDH + ++   M  L+R +L
Sbjct: 95  AAKQALAAGHSAVEEMLLLTVHGILHLLGYDHAEPEEKKEMFDLQRRLL 143


>gi|134093656|ref|YP_001098731.1| hypothetical protein HEAR0379 [Herminiimonas arsenicoxydans]
 gi|166232645|sp|A4G265|RRMF_HERAR RecName: Full=Probable rRNA maturation factor
 gi|133737559|emb|CAL60602.1| putative metal-dependent hydrolase [Herminiimonas arsenicoxydans]
          Length = 156

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--TAFASSDGCSSLMLGDIVLAYEIIE 112
            +++L F D+   + LN  YRG D  TNVL+F       S     ++   DI+L  ++++
Sbjct: 38  AQITLRFVDAAEGQILNRNYRGKDYATNVLTFTYNDDDGSDIADDAVTQADIILCTDVLQ 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    K    H  HL+IHG LH  GYDH  D++A  ME LE   L  LG  +PY
Sbjct: 98  REAAEQNKTLIFHAAHLVIHGVLHAQGYDHESDEEAEEMEALEIEFLAALGFPNPY 153


>gi|290960550|ref|YP_003491732.1| hypothetical protein SCAB_61701 [Streptomyces scabiei 87.22]
 gi|260650076|emb|CBG73192.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 165

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           D     +LGDIVL  
Sbjct: 34  LSELSVIVVDADAMEQLHIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+ E +      +   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAEKQGKDADTQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|325068590|ref|ZP_08127263.1| hypothetical protein AoriK_12246 [Actinomyces oris K20]
 gi|326773546|ref|ZP_08232829.1| metalloprotease [Actinomyces viscosus C505]
 gi|326636776|gb|EGE37679.1| metalloprotease [Actinomyces viscosus C505]
          Length = 152

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSL-MLGDIVLAYEI 110
            EL+++F D   +E L+  +  +  PT+V+SFP       S+D  +    LGDIVL  ++
Sbjct: 35  AELNIMFIDPEPMEELHVRWLDLPGPTDVMSFPMDELRPGSADSPTPAGTLGDIVLCPQV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L +HG LHLLGYDH + ++   M  L+R +L
Sbjct: 95  AAKQALAAGHSAVEEMLLLTVHGILHLLGYDHAEPEEKKEMFDLQRRLL 143


>gi|317152962|ref|YP_004121010.1| hypothetical protein Daes_1250 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943213|gb|ADU62264.1| protein of unknown function UPF0054 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 162

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 16/107 (14%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---------------DGCSSLML 101
           L L   D   I  LN E+ G   PTN+LSFP AF  S                G  +  L
Sbjct: 42  LELTLVDDREIARLNREFMGCPGPTNILSFP-AFERSGPDSGPDVDPDSGPDSGTMAEYL 100

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           G++ L+ + +  EA++ G+    HL  L+ HG LHL G+DH ++ DA
Sbjct: 101 GELALSVDTLAREAHLYGQPPRVHLARLLAHGILHLAGHDHGEEMDA 147


>gi|302518989|ref|ZP_07271331.1| metal-dependent hydrolase [Streptomyces sp. SPB78]
 gi|318062407|ref|ZP_07981128.1| metal-binding heat shock protein [Streptomyces sp. SA3_actG]
 gi|318079398|ref|ZP_07986730.1| metal-binding heat shock protein [Streptomyces sp. SA3_actF]
 gi|333027184|ref|ZP_08455248.1| putative metalloprotease [Streptomyces sp. Tu6071]
 gi|302427884|gb|EFK99699.1| metal-dependent hydrolase [Streptomyces sp. SPB78]
 gi|332747036|gb|EGJ77477.1| putative metalloprotease [Streptomyces sp. Tu6071]
          Length = 165

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D   +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVILVDGPAMEQLHVQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKEF--ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+ E +      E   +  L  L +HG LHLLGYDH +  +   M GL+++I++
Sbjct: 94  EVAERQGREAPTEHSTDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQQAIVD 147


>gi|261414960|ref|YP_003248643.1| protein of unknown function UPF0054 [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371416|gb|ACX74161.1| protein of unknown function UPF0054 [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 161

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 6/113 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +++V      +  +N  YRG+DK T+VLSF   +         MLG+I +A + ++ +A 
Sbjct: 47  VNIVLCTDEFVREMNKNYRGLDKVTDVLSF--EWHEEIPGEEEMLGEIYIARDQVKRQAP 104

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             G  F   +  +I+HG LHL GYDH+   D  VM   E    E LG+ DPY+
Sbjct: 105 QYGNSFFAEMKRVIVHGLLHLSGYDHIKAADRKVMRARE---CEFLGL-DPYK 153


>gi|153816465|ref|ZP_01969133.1| hypothetical protein RUMTOR_02718 [Ruminococcus torques ATCC 27756]
 gi|145846207|gb|EDK23125.1| hypothetical protein RUMTOR_02718 [Ruminococcus torques ATCC 27756]
          Length = 160

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---------------CSSL 99
            E+SL+ T    I+ +N   R ID+ T+VLSFP A   + G                  L
Sbjct: 34  TEVSLLLTTDEEIKEINRMQRQIDRATDVLSFPMADYETPGDFSHLDEDAGLFHPDTGEL 93

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           MLGDIV++ + +  +A   G         LI H  LHL GYDH+++ +   ME  ++ I+
Sbjct: 94  MLGDIVISVDKVFEQAEEYGHSLLREYAFLIAHSMLHLFGYDHMEEVERKEMEMHQKKIM 153

Query: 160 EDLGIN 165
           E + I 
Sbjct: 154 ELVNIT 159


>gi|317500212|ref|ZP_07958443.1| hypothetical protein HMPREF1026_00385 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087560|ref|ZP_08336491.1| metalloprotease [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898383|gb|EFV20423.1| hypothetical protein HMPREF1026_00385 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330400700|gb|EGG80304.1| metalloprotease [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 164

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 15/126 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---------------CSSL 99
            E+SL+ T    I+ +N   R ID+ T+VLSFP A   + G                  L
Sbjct: 38  TEVSLLLTTDEEIKEINRMQRQIDRATDVLSFPMADYETPGDFSHLDEDAGLFHPDTGEL 97

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           MLGDIV++ + +  +A   G         LI H  LHL GYDH+++ +   ME  ++ I+
Sbjct: 98  MLGDIVISVDKVFEQAEEYGHSLLREYAFLIAHSMLHLFGYDHMEEVERKEMEMHQKKIM 157

Query: 160 EDLGIN 165
           E + I 
Sbjct: 158 ELVNIT 163


>gi|307718663|ref|YP_003874195.1| transcriptional regulator [Spirochaeta thermophila DSM 6192]
 gi|306532388|gb|ADN01922.1| transcriptional regulator [Spirochaeta thermophila DSM 6192]
          Length = 148

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 5/88 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++++V   +  I+ LN  +RG D+PT+VLSFP    +S+G S +  GDIV+A E++  +A
Sbjct: 37  DIAVVMCSAEFIQELNRTFRGKDEPTDVLSFP----NSEGGSRIQ-GDIVIAPEVVVHQA 91

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHV 143
              G      L+ +I+HG LHL G DH+
Sbjct: 92  ADWGVPAHEELLRVILHGLLHLSGMDHM 119


>gi|240172994|ref|ZP_04751652.1| putative metalloprotease [Mycobacterium kansasii ATCC 12478]
          Length = 178

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 11/132 (8%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           + L+S   FV + +      ELS+V  D+  +  L+  +  +  PT+V+SFP       G
Sbjct: 16  TELVSVARFVIDKMDVNPGAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGG 75

Query: 96  ------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                     MLGDIVL  E    +A   G    + L  L IHG LHLLGYDH +  +  
Sbjct: 76  RPDAPEPGPAMLGDIVLCPEFAAEQAAAAGHSLGHELALLTIHGVLHLLGYDHGEPDEER 135

Query: 150 VMEGLERSILED 161
            M  L+  +LE+
Sbjct: 136 EMFALQERLLEE 147


>gi|167749631|ref|ZP_02421758.1| hypothetical protein EUBSIR_00589 [Eubacterium siraeum DSM 15702]
 gi|167657384|gb|EDS01514.1| hypothetical protein EUBSIR_00589 [Eubacterium siraeum DSM 15702]
          Length = 169

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 7/137 (5%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--- 89
             V  K ++  +    FV +  V ++LV  D+ RI+ +N E+R  +K T+V+SFP     
Sbjct: 32  RTVIRKCIAETLRVTDFVGDADVSVTLV--DNERIKRINKEFRDKNKVTDVISFPLGAYD 89

Query: 90  -FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            +  +    + MLGDIV++ E    +A   G      +  L  H  LHLLGYDH DD D 
Sbjct: 90  EYDVNPENGAYMLGDIVISMEKAHAQAIEYGHSLVREVGFLATHSTLHLLGYDHEDDPDG 149

Query: 149 -CVMEGLERSILEDLGI 164
             VM  L+  +L +L I
Sbjct: 150 EKVMLELQDLVLNNLKI 166


>gi|227548791|ref|ZP_03978840.1| metalloprotease [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079121|gb|EEI17084.1| metalloprotease [Corynebacterium lipophiloflavum DSM 44291]
          Length = 187

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-------CSSLMLGDIVLA 107
            E+++   D   +  L+  +  ++ PT+V+SFP    +  G           MLGDI+L 
Sbjct: 36  TEVTVTLVDEPTMADLHVRWMDLEGPTDVMSFPMDELTPGGGRPDAAQPGPAMLGDIILC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
                 +A + G +  + L  L +HG LHLLGYDHV  +D   M  L+  IL D
Sbjct: 96  PAFDRRQAEIAGHDLGHELALLTVHGVLHLLGYDHVAPEDEREMFSLQNEILAD 149


>gi|158334602|ref|YP_001515774.1| hypothetical protein AM1_1432 [Acaryochloris marina MBIC11017]
 gi|189038694|sp|B0C7R9|RRMF_ACAM1 RecName: Full=Probable rRNA maturation factor
 gi|158304843|gb|ABW26460.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 176

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLM--LGDIVLAYEI 110
           ELSL+ TD   I+ LN  YR +D+PT+VL+F T       +D  S +   LGDI+++ E 
Sbjct: 58  ELSLLLTDDAAIQNLNATYRHLDRPTDVLAFATLDLTEQPTDLWSEMPVELGDIIISVET 117

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
              +A          L  L  HG LHLLG+DH
Sbjct: 118 AAQQAQEQQHPLPQELAWLATHGLLHLLGWDH 149


>gi|222099958|ref|YP_002534526.1| Putative metalloprotease [Thermotoga neapolitana DSM 4359]
 gi|254807298|sp|B9K877|RRMF_THENN RecName: Full=Probable rRNA maturation factor
 gi|221572348|gb|ACM23160.1| Putative metalloprotease [Thermotoga neapolitana DSM 4359]
          Length = 149

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           V  +++     +I+ +N E+RG D PT+VL+FP            + G+I +  E++E  
Sbjct: 32  VNTNVILVSKDQIKEMNREFRGEDFPTDVLTFP--------LFEEVYGEIYICPEVVEEN 83

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVM 151
           A      FE  L+ ++IHG LHL GYDH  +DK+A  M
Sbjct: 84  AKEYNNTFEKELIEVVIHGILHLAGYDHEFEDKNAKEM 121


>gi|262203048|ref|YP_003274256.1| hypothetical protein Gbro_3158 [Gordonia bronchialis DSM 43247]
 gi|262086395|gb|ACY22363.1| protein of unknown function UPF0054 [Gordonia bronchialis DSM
           43247]
          Length = 188

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDGCSSLMLGDIVLAYEI 110
           LS++  D   +  ++ ++  +  PT+V+SFP           +      +LGDIVL  E 
Sbjct: 37  LSVLCVDEDTMADMHVQWMDLPGPTDVMSFPMDELVPGGRPDAADLGPAILGDIVLCPEF 96

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
              +A    + F++ L  L IHG LHLLG+DH D  +   M GL+  IL+
Sbjct: 97  AAQQAKTAKRSFDHELSMLTIHGVLHLLGFDHADPDEEREMFGLQNEILD 146


>gi|257458354|ref|ZP_05623502.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
 gi|257444289|gb|EEV19384.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
          Length = 153

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLMLGDIVLAYEIIEI 113
           +LS+VF     I  LN  YR ID PT+VLSF     +   DG      GDIV++ + +  
Sbjct: 37  DLSVVFCKDAFIHELNKTYRHIDSPTDVLSFEQGDEYDDEDGNLRFNAGDIVISLDSLRS 96

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            A          L  L+IHG LHL G DH D+     M  L+  IL
Sbjct: 97  NAETFNVTMNEELKRLLIHGILHLSGMDHSDNDPQQEMLQLQEKIL 142


>gi|328948521|ref|YP_004365858.1| metalloprotease ybeY [Treponema succinifaciens DSM 2489]
 gi|328448845|gb|AEB14561.1| metalloprotease ybeY [Treponema succinifaciens DSM 2489]
          Length = 164

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLMLGDIVLAYEIIEI 113
           E S++F     I+ LN  YR ID PT+VLSF     +   D    L  GDI ++ + +  
Sbjct: 39  EFSILFCSDEYIQYLNKTYRNIDNPTDVLSFENGEKYTDEDNVVWLQAGDIAISVDTLPK 98

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDD------KDACVMEGLERSILEDL 162
            +          L  LIIHG LHL GYDH ++      +  C M   ++ +++D 
Sbjct: 99  NSEYFAVSQNEELKRLIIHGILHLNGYDHGEEHVEKNVEPKCEMLVFQKKLMKDF 153


>gi|225873317|ref|YP_002754776.1| conserved hypothetical protein TIGR00043 [Acidobacterium capsulatum
           ATCC 51196]
 gi|225791778|gb|ACO31868.1| conserved hypothetical protein TIGR00043 [Acidobacterium capsulatum
           ATCC 51196]
          Length = 202

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGC-SSLMLGDIVLAYEIIEI 113
           ++S++ T   +I   N E+RG +KPT+VLSFP A     DG   + + GD+ ++ E  + 
Sbjct: 37  DVSVLLTGDKQIRRWNREFRGKNKPTDVLSFPAAPLDGPDGPIPAPIAGDLAISVETADR 96

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVME-------GLERSILEDLGIN 165
           +A          L  L++HG LHL GYDH  D+ +   +E       GL+ +++E     
Sbjct: 97  QAAEHRHTLIEELKVLLLHGTLHLAGYDHETDNGEMARLEQRLRIKLGLKSALIERTQAA 156

Query: 166 DPYEV 170
           DP  +
Sbjct: 157 DPKRL 161


>gi|317177908|dbj|BAJ55697.1| putative metalloprotease [Helicobacter pylori F16]
          Length = 140

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N ++RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDFRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   EN +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHSLENEIALLFIHGVLHLLGYDHEKDK 114


>gi|300741538|ref|ZP_07071559.1| putative metalloprotease [Rothia dentocariosa M567]
 gi|300380723|gb|EFJ77285.1| putative metalloprotease [Rothia dentocariosa M567]
          Length = 173

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 14/147 (9%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           L  L + +FAK     ISK  +       LS+      ++E ++ E+  +   T+V+SFP
Sbjct: 35  LSNLVDYIFAKL---FISKDTY-------LSIAVVGEKQMEKIHLEWMDLPGATDVMSFP 84

Query: 88  T---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
                  + D  +  MLGDIVL   +   +    G    + L  L  HG LH LGYDH  
Sbjct: 85  MDELVPGTEDELAQGMLGDIVLCPSVAARQGADAGHSTLDELCLLTTHGILHCLGYDHGT 144

Query: 145 DKDACVMEGLERSILED-LGINDPYEV 170
            ++   M GL+RS+LE  LG   P E 
Sbjct: 145 AQEEAEMFGLQRSLLEGFLGRAAPVET 171


>gi|297199578|ref|ZP_06916975.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197713494|gb|EDY57528.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 165

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           D     +LGDIVL  
Sbjct: 34  LSELSVIVVDTDAMEQLHIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKEFENH------LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+    A   G+E E        L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EV----AKRQGEEAETQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|311113631|ref|YP_003984853.1| metalloprotease [Rothia dentocariosa ATCC 17931]
 gi|310945125|gb|ADP41419.1| probable metalloprotease [Rothia dentocariosa ATCC 17931]
          Length = 173

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 14/147 (9%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           L  L + +FAK     ISK  +       LS+      ++E ++ E+  +   T+V+SFP
Sbjct: 35  LSNLVDYIFAKL---FISKDTY-------LSIAVVGEKQMEKIHLEWMDLPGATDVMSFP 84

Query: 88  T---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
                  + D  +  MLGDIVL   +   +    G    + L  L  HG LH LGYDH  
Sbjct: 85  MDELVPGTEDELAQGMLGDIVLCPPVAARQGADAGHSTLDELCLLTTHGILHCLGYDHGT 144

Query: 145 DKDACVMEGLERSILED-LGINDPYEV 170
            ++   M GL+RS+LE  LG   P E 
Sbjct: 145 AQEEAEMFGLQRSLLEGFLGRAAPVET 171


>gi|227833630|ref|YP_002835337.1| hypothetical protein cauri_1806 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262184633|ref|ZP_06044054.1| putative metalloprotease [Corynebacterium aurimucosum ATCC 700975]
 gi|254800637|sp|C3PHU5|RRMF_CORA7 RecName: Full=Probable rRNA maturation factor
 gi|227454646|gb|ACP33399.1| hypothetical protein cauri_1806 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 191

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 9/116 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSL-----MLGDIV 105
            E ++   D   I  L+  +  ++ PT+V+SFP    T  AS+    ++     MLGDIV
Sbjct: 36  AECTITAVDLDTIADLHVRWMDLEGPTDVMSFPMDELTPGASAGRPDAVEAGPAMLGDIV 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           L  E  + +A   G    + L  L +HG LHLLGYDH    +   M GL+  +L D
Sbjct: 96  LCPEFAQRQATAAGHSLGHELALLTVHGCLHLLGYDHTTAAEEKEMFGLQNELLAD 151


>gi|291530789|emb|CBK96374.1| conserved hypothetical protein TIGR00043 [Eubacterium siraeum 70/3]
 gi|291557706|emb|CBL34823.1| conserved hypothetical protein TIGR00043 [Eubacterium siraeum
           V10Sc8a]
          Length = 169

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 7/137 (5%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--- 89
             V  K ++  +    FV +  V ++LV  D+ RI+ +N E+R  +K T+V+SFP     
Sbjct: 32  RTVIRKCIAETLRVTDFVGDADVSVTLV--DNERIKRINKEFRDKNKVTDVISFPLGAYD 89

Query: 90  -FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            +  +    + MLGDIV++ E    +A   G      +  L  H  LHLLGYDH DD D 
Sbjct: 90  EYDVNPENGAYMLGDIVISMEKAHAQAIEYGHSLIREVGFLATHSTLHLLGYDHEDDPDG 149

Query: 149 -CVMEGLERSILEDLGI 164
             VM  L+  +L +L I
Sbjct: 150 EKVMLELQDLVLNNLKI 166


>gi|291166726|gb|EFE28772.1| metalloprotease [Filifactor alocis ATCC 35896]
          Length = 162

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 35  VFAKAVSNLISKGYFVKENIV---ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP---- 87
           VF K +S++I       E++    E+SL    + +I  LN  +R ID+ T+VLSFP    
Sbjct: 18  VFQKTLSDIIEYA-METEHLTGDYEVSLSVVSADQIRELNANFRQIDRITDVLSFPMYER 76

Query: 88  -----TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                           + +GDIVL Y+    +A   G   +  + +L+ H   HLLGYDH
Sbjct: 77  EELDEIEEKKEYEDYEVNIGDIVLCYDRAVEQAKEYGHSLKREICYLVTHSIFHLLGYDH 136

Query: 143 VDDKDACVMEGLERSILEDLGI 164
           +++++  +M   E  +L    I
Sbjct: 137 MEEEEKQMMRTREEQVLSHFHI 158


>gi|269794667|ref|YP_003314122.1| hypothetical protein Sked_13480 [Sanguibacter keddieii DSM 10542]
 gi|269096852|gb|ACZ21288.1| conserved hypothetical protein TIGR00043 [Sanguibacter keddieii DSM
           10542]
          Length = 153

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            ELS++F  +  +  L+ ++     PT+VLSFP          +   + +LGD+V+  E+
Sbjct: 35  TELSILFVGTEVMSELHVQWMDEPGPTDVLSFPMDELRPGREGEVTPAGLLGDVVVCPEV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             I+A   G      ++ L  HG LHLLGYDH + ++   M GL+R +L
Sbjct: 95  AAIQAQGAGHSTVEEMLLLTTHGILHLLGYDHAEPEEEKEMFGLQRRLL 143


>gi|223985695|ref|ZP_03635742.1| hypothetical protein HOLDEFILI_03048 [Holdemania filiformis DSM
           12042]
 gi|223962306|gb|EEF66771.1| hypothetical protein HOLDEFILI_03048 [Holdemania filiformis DSM
           12042]
          Length = 162

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVL 106
           K+    +S++F  S +I  +N +YR +D+PT+V+SF       +      + + LGDI +
Sbjct: 43  KQGDYTISVIFVKSRKIHEINRDYRQVDRPTDVISFAACDDQDEFELIEEAEVELGDIFI 102

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             E    +A   G   +  +  L  HG LH  GYDH+   +  +M  L+  IL+ L
Sbjct: 103 NVEAAISQAEEYGHSLQREICFLFTHGLLHCFGYDHMQPDEEKIMFDLQHEILDPL 158


>gi|134098070|ref|YP_001103731.1| putative metalloprotease [Saccharopolyspora erythraea NRRL 2338]
 gi|291007471|ref|ZP_06565444.1| putative metalloprotease [Saccharopolyspora erythraea NRRL 2338]
 gi|166231386|sp|A4F9T1|RRMF_SACEN RecName: Full=Probable rRNA maturation factor
 gi|133910693|emb|CAM00806.1| protein of unknown function UPF0054 [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 183

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 6/116 (5%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLMLGDIVL 106
            + ELS+V  +   +  L+  +  +  PT+V++FP      +    S G    +LGDIVL
Sbjct: 33  QLAELSIVLVELDVMSDLHERWMDLPGPTDVMAFPMDEYDSSRRPDSAGAGPALLGDIVL 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
                + +A   G    + L  L +HG LHLLGYDH + ++   M GL+  IL D 
Sbjct: 93  CPAFAKDQARKAGHSLLDELHLLTVHGVLHLLGYDHAEPEEEREMFGLQNQILADF 148


>gi|256832769|ref|YP_003161496.1| hypothetical protein Jden_1545 [Jonesia denitrificans DSM 20603]
 gi|256686300|gb|ACV09193.1| protein of unknown function UPF0054 [Jonesia denitrificans DSM
           20603]
          Length = 151

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 4/110 (3%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYE 109
           + ELS+VF D   I  L+ ++  I  PT+VLSFP        +       +LGDIV+  E
Sbjct: 34  LTELSVVFVDPDTISELHEQWMDIPGPTDVLSFPMDELRPGTTERPTEQGILGDIVICPE 93

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   +A   G      ++ L  HG LHLLGYDH + ++   M  L+R +L
Sbjct: 94  VAVDQAAQAGHSPIEEMLLLATHGILHLLGYDHAEPEEEREMFSLQRHLL 143


>gi|206602218|gb|EDZ38700.1| Conserved protein of unknown function [Leptospirillum sp. Group II
           '5-way CG']
          Length = 169

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 2/107 (1%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +++ F ++ RI  +N EYRG ++ T+VLSF +  +          G+I+++ E  E +A 
Sbjct: 37  VTITFVNNRRIRIVNREYRGKNRSTDVLSF-SYPSPPFPDIPFPDGEILISTEKAERQAR 95

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
                 E  +++LIIHG  HL G+DH    +D+  M+ +ER I   L
Sbjct: 96  EQNISLETEIINLIIHGLCHLAGHDHETGPEDSLRMKSVERKIANAL 142


>gi|297566635|ref|YP_003685607.1| hypothetical protein Mesil_2231 [Meiothermus silvanus DSM 9946]
 gi|296851084|gb|ADH64099.1| protein of unknown function UPF0054 [Meiothermus silvanus DSM 9946]
          Length = 149

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           LR+  +    K ++ L   G+ V       ++V TD   I  L  E+ G D PT+VLSFP
Sbjct: 24  LRSRLKRSLGKLMAELGYPGHAV-------TVVLTDDPEIRALKLEHWGEDTPTDVLSFP 76

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
           T F   D      LGDIV++ +  + +A   G   E   + L  H   HLLG+DH  + +
Sbjct: 77  T-FEPGDPFVPPHLGDIVISLDTAKHQAEEHGHTLETEALILAAHSLWHLLGHDHTTEAE 135


>gi|261337356|ref|ZP_05965240.1| putative metalloprotease [Bifidobacterium gallicum DSM 20093]
 gi|270277734|gb|EFA23588.1| putative metalloprotease [Bifidobacterium gallicum DSM 20093]
          Length = 181

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  + G+  PT+V+SFP       S++  S  +LGDIV+   +  
Sbjct: 36  DLAILFVDPDPIAQLHERWMGLLGPTDVMSFPMDELRPGSTNALSEGILGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH        M GL+R +L
Sbjct: 96  QQAAAAGHSAMEEMLLLTIHGVLHLLGYDHRTKDQERQMFGLQRQLL 142


>gi|320094218|ref|ZP_08026022.1| metalloprotease [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978843|gb|EFW10382.1| metalloprotease [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 149

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            EL+++F  +  +E L+ ++  +  PT+V+SFP        + +     MLGDI +  E+
Sbjct: 34  AELNILFIGAGPMEELHVKWLDLPGPTDVMSFPMDELKPGTADNPTPPGMLGDICICPEV 93

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLGYDH +D +   M  L+R +L
Sbjct: 94  ATRQAADSGHTAAEEMLLLATHGILHLLGYDHAEDAERAEMFALQRKLL 142


>gi|296113058|ref|YP_003626996.1| uncharacterized protein family (UPF0054) family protein [Moraxella
           catarrhalis RH4]
 gi|295920752|gb|ADG61103.1| uncharacterized protein family (UPF0054) family protein [Moraxella
           catarrhalis RH4]
 gi|326560434|gb|EGE10816.1| hypothetical protein E9G_05772 [Moraxella catarrhalis 7169]
 gi|326561638|gb|EGE11975.1| hypothetical protein E9K_08504 [Moraxella catarrhalis 103P14B1]
 gi|326562601|gb|EGE12912.1| hypothetical protein E9M_04866 [Moraxella catarrhalis 46P47B1]
 gi|326563589|gb|EGE13843.1| hypothetical protein E9O_08074 [Moraxella catarrhalis 12P80B1]
 gi|326565831|gb|EGE15993.1| hypothetical protein E9Q_09660 [Moraxella catarrhalis BC1]
 gi|326570486|gb|EGE20526.1| hypothetical protein E9U_03828 [Moraxella catarrhalis BC8]
 gi|326571169|gb|EGE21193.1| hypothetical protein E9S_05602 [Moraxella catarrhalis BC7]
 gi|326573460|gb|EGE23428.1| hypothetical protein E9Y_09446 [Moraxella catarrhalis 101P30B1]
 gi|326575642|gb|EGE25565.1| hypothetical protein E9W_01670 [Moraxella catarrhalis CO72]
 gi|326577106|gb|EGE27000.1| hypothetical protein EA1_04120 [Moraxella catarrhalis O35E]
          Length = 180

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 3/102 (2%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           +N   RG D  TNVLS+P+   +  +     + LG++VL +E++  EA+   K FE+HL 
Sbjct: 76  VNLAARGKDYATNVLSYPSELPTEMTTLLGEIELGELVLCHEVVLNEADEQNKSFESHLT 135

Query: 128 HLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           HLIIHG LHLLG+DH + D DA  MEG E  IL  LGI++PY
Sbjct: 136 HLIIHGLLHLLGFDHEISDADADQMEGFEIEILAQLGIDNPY 177


>gi|306829341|ref|ZP_07462531.1| probable metalloprotease [Streptococcus mitis ATCC 6249]
 gi|304428427|gb|EFM31517.1| probable metalloprotease [Streptococcus mitis ATCC 6249]
          Length = 165

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYRG D+PT+V+S         +F   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRGTDRPTDVISLEYKPELDISFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|282861808|ref|ZP_06270872.1| protein of unknown function UPF0054 [Streptomyces sp. ACTE]
 gi|282563624|gb|EFB69162.1| protein of unknown function UPF0054 [Streptomyces sp. ACTE]
          Length = 165

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDAAAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCP 93

Query: 109 EII--EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+   + E    G   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAKRQGEEAPTGHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|88809863|ref|ZP_01125369.1| hypothetical protein WH7805_10818 [Synechococcus sp. WH 7805]
 gi|88786247|gb|EAR17408.1| hypothetical protein WH7805_10818 [Synechococcus sp. WH 7805]
          Length = 200

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 4/94 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAYEII 111
           V L L  T    I  LN  +RG+ + T+VLSF  A  S       ++L LGDIV++    
Sbjct: 70  VSLGLQLTGDREIAELNGRWRGLPQATDVLSF-AALESEMPLQQATTLELGDIVVSVPTA 128

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             +A   G   E  L  L+ HG LHLLG+DH D+
Sbjct: 129 ARQAIEQGHSLERELQWLVSHGLLHLLGWDHPDE 162


>gi|297160576|gb|ADI10288.1| putative metalloprotease [Streptomyces bingchenggensis BCW-1]
          Length = 165

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDADAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCP 93

Query: 109 EII--EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+   + E    G   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAKKQGEEAPTGHSMDEELQLLTVHGVLHLLGYDHEEPDERAEMFGLQAAIVD 147


>gi|300933262|ref|ZP_07148518.1| putative metalloprotease [Corynebacterium resistens DSM 45100]
          Length = 194

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGC--SSLMLGDIV 105
           +  ELS+   D   I  L+  +  +  PT+V+SFP       +   DG   S  MLGDI+
Sbjct: 34  SAAELSIHIVDLDTIADLHERWLDLPGPTDVMSFPMDELTPGWGRKDGPPPSPAMLGDIM 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           L  +  E +AN  G    + L  L +HG LHLLG+DH   ++   M  L+  IL
Sbjct: 94  LCPDFAERQANRAGHSLAHELDLLTVHGVLHLLGFDHTTPEEEQRMFSLQNEIL 147


>gi|269102015|ref|ZP_06154712.1| predicted metal-dependent hydrolase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161913|gb|EEZ40409.1| predicted metal-dependent hydrolase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 78

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 47/72 (65%)

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGD+V+  +++E EA    K    H  H+++HG LHLLGYDH++D +A  ME LE  I+
Sbjct: 5   LLGDLVICRQVVEREAPEQNKTLTAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIM 64

Query: 160 EDLGINDPYEVD 171
           E +G  DPY  +
Sbjct: 65  EKMGFPDPYAAE 76


>gi|257784596|ref|YP_003179813.1| hypothetical protein Apar_0793 [Atopobium parvulum DSM 20469]
 gi|257473103|gb|ACV51222.1| protein of unknown function UPF0054 [Atopobium parvulum DSM 20469]
          Length = 169

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGCSSLMLGDIVLAYEI 110
           +S+       I+ +N E+R  + PT+V+S           A  + C    LGDI+LA + 
Sbjct: 41  VSISIVSDEEIQQVNLEWREKNAPTDVISLEVERPDDPDLAPGEMCE---LGDIILAPQF 97

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           I  +A   G    +    +++H  LHLLGYDHV D +A VME  E +++
Sbjct: 98  IARQAKEYGTTEADEFRLMLVHAMLHLLGYDHVADDEAEVMEAREDALV 146


>gi|239931373|ref|ZP_04688326.1| putative metalloprotease [Streptomyces ghanaensis ATCC 14672]
 gi|291439743|ref|ZP_06579133.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342638|gb|EFE69594.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 165

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           D     +LGDIVL  
Sbjct: 34  LSELSVIVVDADAMEQLHIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE------FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+    A   GKE       +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EV----AARQGKEAPTQHTMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|41408257|ref|NP_961093.1| putative metalloprotease [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|59799130|sp|Q73XZ9|RRMF_MYCPA RecName: Full=Probable rRNA maturation factor
 gi|41396612|gb|AAS04476.1| hypothetical protein MAP_2159c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 177

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           + LIS   FV   +      ELS+V  D+  +  L+  +  +  PT+V+SFP       G
Sbjct: 16  AELISVARFVIAKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGG 75

Query: 96  ------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                     MLGDIVL  E    +A   G    + L  L IHG LHLLGYDH +  +  
Sbjct: 76  RPDAPEPGPAMLGDIVLCPEFAADQAAAAGHSLGHELALLTIHGVLHLLGYDHGEPDEEK 135

Query: 150 VMEGLERSILED 161
            M  L+  +LE+
Sbjct: 136 EMFALQDRLLEE 147


>gi|118462943|ref|YP_881245.1| metalloprotease [Mycobacterium avium 104]
 gi|254774751|ref|ZP_05216267.1| putative metalloprotease [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|145572765|sp|A0QEA7|RRMF_MYCA1 RecName: Full=Probable rRNA maturation factor
 gi|118164230|gb|ABK65127.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 177

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           + LIS   FV   +      ELS+V  D+  +  L+  +  +  PT+V+SFP       G
Sbjct: 16  AELISVARFVIAKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGG 75

Query: 96  ------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                     MLGDIVL  E    +A   G    + L  L IHG LHLLGYDH +  +  
Sbjct: 76  RPDAPEPGPAMLGDIVLCPEFAADQAAAAGHSLGHELALLTIHGVLHLLGYDHGEPDEEK 135

Query: 150 VMEGLERSILED 161
            M  L+  +LE+
Sbjct: 136 EMFALQDRLLEE 147


>gi|328882369|emb|CCA55608.1| metal-dependent hydrolase [Streptomyces venezuelae ATCC 10712]
          Length = 165

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 11/123 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYEI 110
           ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  E+
Sbjct: 36  ELSVIVVDAEAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEV 95

Query: 111 IEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL----EDLGI 164
              +      E   +  L  L +HG LHLLGYDH + ++   M GL+ +I+    E+ G+
Sbjct: 96  ATQQGKDAPTEHSMDEELQLLTVHGVLHLLGYDHEEPEEKAEMFGLQAAIVDGWREEKGL 155

Query: 165 NDP 167
             P
Sbjct: 156 TGP 158


>gi|318040668|ref|ZP_07972624.1| metal-dependent hydrolase [Synechococcus sp. CB0101]
          Length = 189

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 11/114 (9%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----------PTAFASSDGCSSLMLGDIV 105
           L L       I  LN ++RG   PT+VL+F           P      +G  +L LGDIV
Sbjct: 70  LGLSLVGDAEIAELNGDWRGKSGPTDVLAFAAQDDGLDDAPPIPMPDDEGEEALELGDIV 129

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           ++ E    +A   G      L  L  HG LHLLG+DH DD    +M   +  +L
Sbjct: 130 ISLETAARQAPEHGHSLVEELQFLATHGLLHLLGWDHPDDASLALMLARQERLL 183


>gi|71894404|ref|YP_278512.1| hypothetical protein MS53_0389 [Mycoplasma synoviae 53]
          Length = 159

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 3/115 (2%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCSSLMLGDIVLAYE 109
           K+ I+++S+V   S+    LNFEYR  DK T++LSF    F   D    L LG++V+   
Sbjct: 43  KQIILDVSIV--SSYTSRKLNFEYRQKDKTTDILSFGYDDFDLYDKMPFLNLGELVICNN 100

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            I+ +A +     +   ++L  HG +HL GYDH  +K+   M+ +  SI   L I
Sbjct: 101 KIKKQAIIFNHSIKREFLYLFTHGLVHLYGYDHQSEKEKKEMDFIVDSIFNPLKI 155


>gi|282858165|ref|ZP_06267360.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
 gi|282584087|gb|EFB89460.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
          Length = 190

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYE 109
           V++SL F D  R+  +N EYR    PT+VLSFP       F        L+LGDIV+   
Sbjct: 61  VQISLQFLDETRMAEVNSEYRQTHAPTDVLSFPLFEKEGRFVPDAQLPPLLLGDIVVCPA 120

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +I   A       E+ L  ++ HG LHLL +DH
Sbjct: 121 VIRKNAVERRVSEESELALVVFHGILHLLAWDH 153


>gi|160880741|ref|YP_001559709.1| hypothetical protein Cphy_2609 [Clostridium phytofermentans ISDg]
 gi|189039831|sp|A9KMV9|RRMF_CLOPH RecName: Full=Probable rRNA maturation factor
 gi|160429407|gb|ABX42970.1| protein of unknown function UPF0054 [Clostridium phytofermentans
           ISDg]
          Length = 165

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 20/129 (15%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------------------AFASSDGC 96
            E+++V T++  I+ +N EYR ID PT+VLSFP                    F    G 
Sbjct: 38  TEINVVLTNNEEIKEINKEYREIDAPTDVLSFPMVEFNEPSDFEHVEEEQEDCFHPDSG- 96

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             LMLGDI+++ + +  +A   G   +  L  LI H  LHL GYDH+++++  VME  +R
Sbjct: 97  -ELMLGDIIVSVDKVFSQAKEFGHSEKRELGFLIAHSMLHLCGYDHMEEEEREVMEERQR 155

Query: 157 SILEDLGIN 165
           +IL+ + ++
Sbjct: 156 AILDRIHLS 164


>gi|315185807|gb|EFU19573.1| protein of unknown function UPF0054 [Spirochaeta thermophila DSM
           6578]
          Length = 148

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++++V      I+ LN  +RG D+PT+VLSFP     S+G S +  GDIV+A E++  +A
Sbjct: 37  DIAVVMCSPEFIQELNRTFRGKDEPTDVLSFP----DSEGGSRIQ-GDIVIAPEVVVHQA 91

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHV 143
              G      L+ +I+HG LHL G DH+
Sbjct: 92  ADWGVPAHEELLRVILHGLLHLSGMDHM 119


>gi|148887457|sp|Q4A620|RRMF_MYCS5 RecName: Full=Probable rRNA maturation factor
 gi|144575092|gb|AAZ43801.2| conserved hypothetical protein [Mycoplasma synoviae 53]
          Length = 155

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 3/115 (2%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDGCSSLMLGDIVLAYE 109
           K+ I+++S+V   S+    LNFEYR  DK T++LSF    F   D    L LG++V+   
Sbjct: 39  KQIILDVSIV--SSYTSRKLNFEYRQKDKTTDILSFGYDDFDLYDKMPFLNLGELVICNN 96

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            I+ +A +     +   ++L  HG +HL GYDH  +K+   M+ +  SI   L I
Sbjct: 97  KIKKQAIIFNHSIKREFLYLFTHGLVHLYGYDHQSEKEKKEMDFIVDSIFNPLKI 151


>gi|319957260|ref|YP_004168523.1| hypothetical protein Nitsa_1526 [Nitratifractor salsuginis DSM
           16511]
 gi|319419664|gb|ADV46774.1| protein of unknown function UPF0054 [Nitratifractor salsuginis DSM
           16511]
          Length = 142

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ ++ TD   I  LN E+R  DK T+VLSFP             LG +V++ + +  +A
Sbjct: 28  EIEVILTDDATIRELNREHRDKDKATDVLSFPL----EGDLPGQPLGSLVISLDHVVQKA 83

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             LG   E  L  L IHG LHLLGYDH  D+
Sbjct: 84  GELGHAPEEELALLFIHGLLHLLGYDHETDR 114


>gi|283853555|ref|ZP_06370794.1| protein of unknown function UPF0054 [Desulfovibrio sp. FW1012B]
 gi|283571054|gb|EFC19075.1| protein of unknown function UPF0054 [Desulfovibrio sp. FW1012B]
          Length = 143

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E  L       +  LN +Y G+  PTNVLSFP    + D      LG++ ++ + +  EA
Sbjct: 37  EYDLRLVGDGEMAALNRDYLGLVGPTNVLSFP----ADDPGRPEYLGEMAVSLDTVAREA 92

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            + G+E   HL  L+ HGFLHL G DH       VME L    +E
Sbjct: 93  FLYGQEPATHLARLLAHGFLHLAGLDH-----GPVMEALTEQAVE 132


>gi|269956974|ref|YP_003326763.1| hypothetical protein Xcel_2187 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305655|gb|ACZ31205.1| protein of unknown function UPF0054 [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 153

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEI 110
            ELS++F D+  +  L+  +     PT+VLSFP          D      LGDIVL  E+
Sbjct: 38  AELSILFVDTTVMTDLHVRWMDEPGPTDVLSFPMDELRPGREGDLTPPGTLGDIVLCPEV 97

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLGYDH + ++   M GL+R +L
Sbjct: 98  ATQQALTAGHSAIEEMLLLTTHGILHLLGYDHAEPEEEKEMFGLQRRLL 146


>gi|152990533|ref|YP_001356255.1| hypothetical protein NIS_0786 [Nitratiruptor sp. SB155-2]
 gi|172048729|sp|A6Q339|RRMF_NITSB RecName: Full=Probable rRNA maturation factor
 gi|151422394|dbj|BAF69898.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 144

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + L+  D  R+ TLN  YR IDK T+VLSFP          +  LG IV+  + +   A 
Sbjct: 34  VELMIVDDERMRTLNKTYRDIDKTTDVLSFPMQ-----EIPNAPLGSIVINADKVLHTAK 88

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LG   ++    L IHG LHLLGYDH  + D   M  +E  ++
Sbjct: 89  ELGHSAKDEFALLYIHGLLHLLGYDH--ESDNGEMRAMEEKLI 129


>gi|307700639|ref|ZP_07637667.1| translation metalloprotein YbeY [Mobiluncus mulieris FB024-16]
 gi|307614169|gb|EFN93410.1| translation metalloprotein YbeY [Mobiluncus mulieris FB024-16]
          Length = 148

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            E++L+  D   +  L+  +  +  PT+VLSFP    T        +  MLGDIVL  ++
Sbjct: 33  AEVNLMMVDMATMTDLHIRWMDLPGPTDVLSFPMDELTPGQEGQPSAGGMLGDIVLCPDV 92

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L +HG LHLLG+DHV +++   M  L+R +L
Sbjct: 93  AAEQARDAGHSAVEEMLLLTVHGLLHLLGFDHVTEEEEKTMFTLQRRLL 141


>gi|227874777|ref|ZP_03992930.1| metalloprotease [Mobiluncus mulieris ATCC 35243]
 gi|269976805|ref|ZP_06183780.1| putative metalloprotease [Mobiluncus mulieris 28-1]
 gi|306818070|ref|ZP_07451801.1| probable metalloprotease [Mobiluncus mulieris ATCC 35239]
 gi|227844552|gb|EEJ54708.1| metalloprotease [Mobiluncus mulieris ATCC 35243]
 gi|269935002|gb|EEZ91561.1| putative metalloprotease [Mobiluncus mulieris 28-1]
 gi|304649034|gb|EFM46328.1| probable metalloprotease [Mobiluncus mulieris ATCC 35239]
          Length = 150

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            E++L+  D   +  L+  +  +  PT+VLSFP    T        +  MLGDIVL  ++
Sbjct: 35  AEVNLMMVDMATMTDLHIRWMDLPGPTDVLSFPMDELTPGQEGQPSAGGMLGDIVLCPDV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L +HG LHLLG+DHV +++   M  L+R +L
Sbjct: 95  AAEQARDAGHSAVEEMLLLTVHGLLHLLGFDHVTEEEEKTMFTLQRRLL 143


>gi|157364821|ref|YP_001471588.1| hypothetical protein Tlet_1970 [Thermotoga lettingae TMO]
 gi|157315425|gb|ABV34524.1| protein of unknown function UPF0054 [Thermotoga lettingae TMO]
          Length = 115

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 10/108 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           +++SLVF    R+  LN EYR ID PT+VL+F   F   +       G+I +    +E  
Sbjct: 10  IDVSLVFIGERRMRNLNREYRKIDSPTDVLTF---FYEEES-----FGEIFICPSQVEKN 61

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSILE 160
           A+   + +E  L  ++IH  LHL GYDH  VD+K   +    E+ + E
Sbjct: 62  ASKYSQRYEIELFRVLIHACLHLCGYDHEFVDNKSQEMFHRQEKYLRE 109


>gi|269127453|ref|YP_003300823.1| hypothetical protein Tcur_3246 [Thermomonospora curvata DSM 43183]
 gi|268312411|gb|ACY98785.1| protein of unknown function UPF0054 [Thermomonospora curvata DSM
           43183]
          Length = 156

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 9/115 (7%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP---------TAFASSDGCSSLMLGDI 104
           + ELSL+  D   +  L+ ++ G   PT+VL+FP               +     +LGD+
Sbjct: 34  LAELSLLLVDEEAMSELHVKWMGEPGPTDVLAFPMDELRPGHRPGGGEEEDPDPALLGDV 93

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           VL   + E +    G   +  L  L  HG LHLLGYDH D ++   M GL+  +L
Sbjct: 94  VLCPAVAERQGAEAGHGTQAELELLCTHGILHLLGYDHADPEEHKEMFGLQERLL 148


>gi|291484979|dbj|BAI86054.1| putative metalloprotease [Bacillus subtilis subsp. natto BEST195]
          Length = 157

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           ++  E+S+    +  I  +N EYRG D PT+V+SF            +      +LGDI+
Sbjct: 36  QDQAEVSVTIVSNDDIHQINKEYRGKDAPTDVISFALEEEGEGEIEIVGAEMPPVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +    +A      F+  L  L +HGFLHLLGYDH+  ++   M   ++ +L+  G+ 
Sbjct: 96  ISADRTREQAEEYNHSFKRELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLK 155


>gi|221310456|ref|ZP_03592303.1| putative metalloprotease [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314779|ref|ZP_03596584.1| putative metalloprotease [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319702|ref|ZP_03600996.1| putative metalloprotease [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323979|ref|ZP_03605273.1| putative metalloprotease [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767580|ref|NP_390410.2| metalloprotease [Bacillus subtilis subsp. subtilis str. 168]
 gi|321312015|ref|YP_004204302.1| metal-binding heat shock protein [Bacillus subtilis BSn5]
 gi|251757429|sp|P46347|RRMF_BACSU RecName: Full=Probable rRNA maturation factor
 gi|225185208|emb|CAB14461.2| putative metal-dependent hydrolase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320018289|gb|ADV93275.1| metal-binding heat shock protein [Bacillus subtilis BSn5]
          Length = 157

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           ++  E+S+    +  I  +N EYRG D PT+V+SF            +      +LGDI+
Sbjct: 36  QDQAEVSVTIVSNDDIHQINKEYRGKDAPTDVISFALEEEGEGEIEIVGAEMPPVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +    +A      F+  L  L +HGFLHLLGYDH+  ++   M   ++ +L+  G+ 
Sbjct: 96  ISADRTREQAEEYNHSFKRELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLK 155


>gi|294629266|ref|ZP_06707826.1| metalloprotease [Streptomyces sp. e14]
 gi|292832599|gb|EFF90948.1| metalloprotease [Streptomyces sp. e14]
          Length = 165

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 7/115 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-----CSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP       G         +LGDIVL  
Sbjct: 34  LSELSVIVVDADAMEQLHIQWMDLPGPTDVMSFPMDELRPPGKDEEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           E+   +      +   +  L  L +HG LHLLGYDH +  +   M GL+ +I++D
Sbjct: 94  EVAAKQGAEAPTQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDD 148


>gi|315604802|ref|ZP_07879861.1| probable metalloprotease [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313473|gb|EFU61531.1| probable metalloprotease [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 149

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            E++++F +   +E L+  +  +  PT+V+SFP        +       MLGDI +  ++
Sbjct: 34  AEVNIIFIEPEPMEELHVRWLDLPGPTDVMSFPMDELKPGTADHPTPPGMLGDICICPQV 93

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLGYDH  D +  VM  L+R +L
Sbjct: 94  AARQAAESGHSVAEEMLLLATHGMLHLLGYDHAHDAEREVMFALQRKLL 142


>gi|283458061|ref|YP_003362672.1| putative metal-dependent hydrolase [Rothia mucilaginosa DY-18]
 gi|283134087|dbj|BAI64852.1| predicted metal-dependent hydrolase [Rothia mucilaginosa DY-18]
          Length = 173

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 4/118 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEI 113
           LS+   +   +E ++ E+  +   T+V+SFP       + +  SS MLGDI+L   +   
Sbjct: 54  LSIAIVNEDEMERVHIEWMDLPGATDVMSFPMDELEPGTPENPSSGMLGDIILCPPVAAR 113

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
           +    G    + L  L  HG LH LGYDH   ++   M G++RSILE+ LG   P E 
Sbjct: 114 QGADAGHSTLDELCLLTTHGILHCLGYDHGTAEEEAEMFGIQRSILEEFLGRPAPVET 171


>gi|94264469|ref|ZP_01288257.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93455100|gb|EAT05324.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 440

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---FASSDGCSSLMLGDIVLAY 108
           +   ELS++  D  R+  LN  YRG D+PTNVL+FP A     ++ G    +LGDIV+A 
Sbjct: 75  QAAAELSILLVDEQRMGQLNAHYRGQDRPTNVLAFPQADHDREAAGGAGPRLLGDIVIAP 134

Query: 109 EIIEIEANVLGKEFENHL 126
            +   EA  LG   +  L
Sbjct: 135 AVAAREARELGISRQRRL 152


>gi|319947870|ref|ZP_08022057.1| metal-binding heat shock protein [Dietzia cinnamea P4]
 gi|319438476|gb|EFV93409.1| metal-binding heat shock protein [Dietzia cinnamea P4]
          Length = 160

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAY 108
            ELS+   D   +  L+  +  +  PT+V+SFP    +  G   L      MLGDIVL  
Sbjct: 35  AELSITLVDKDTMADLHVTWMNLPGPTDVMSFPMDELTPGGRPDLPEPGPAMLGDIVLCP 94

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
                +A   G    + L  L +HG LHLLGYDH +  +   M GL+  +L
Sbjct: 95  AFAADQAASSGHPLAHELALLTVHGCLHLLGYDHAEPAEEREMFGLQNELL 145


>gi|322385837|ref|ZP_08059480.1| metalloprotease [Streptococcus cristatus ATCC 51100]
 gi|321270122|gb|EFX53039.1| metalloprotease [Streptococcus cristatus ATCC 51100]
          Length = 165

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLML--- 101
           KEN  E+++ F  + R   LN EYR  D+PT+V+S         AF   D   +  L   
Sbjct: 33  KEN-KEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDIAFDEEDLADNPELTEM 91

Query: 102 --------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                   G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M G
Sbjct: 92  LEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFG 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|15841879|ref|NP_336916.1| putative metalloprotease [Mycobacterium tuberculosis CDC1551]
 gi|167968755|ref|ZP_02551032.1| hypothetical protein MtubH3_12240 [Mycobacterium tuberculosis
           H37Ra]
 gi|215404293|ref|ZP_03416474.1| putative metalloprotease [Mycobacterium tuberculosis 02_1987]
 gi|215412113|ref|ZP_03420877.1| putative metalloprotease [Mycobacterium tuberculosis 94_M4241A]
 gi|215427743|ref|ZP_03425662.1| putative metalloprotease [Mycobacterium tuberculosis T92]
 gi|215431307|ref|ZP_03429226.1| putative metalloprotease [Mycobacterium tuberculosis EAS054]
 gi|215446611|ref|ZP_03433363.1| putative metalloprotease [Mycobacterium tuberculosis T85]
 gi|218754095|ref|ZP_03532891.1| putative metalloprotease [Mycobacterium tuberculosis GM 1503]
 gi|219558359|ref|ZP_03537435.1| putative metalloprotease [Mycobacterium tuberculosis T17]
 gi|254232509|ref|ZP_04925836.1| hypothetical protein TBCG_02311 [Mycobacterium tuberculosis C]
 gi|254365144|ref|ZP_04981190.1| hypothetical protein TBHG_02306 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551414|ref|ZP_05141861.1| putative metalloprotease [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187370|ref|ZP_05764844.1| putative metalloprotease [Mycobacterium tuberculosis CPHL_A]
 gi|260201491|ref|ZP_05768982.1| putative metalloprotease [Mycobacterium tuberculosis T46]
 gi|260205668|ref|ZP_05773159.1| putative metalloprotease [Mycobacterium tuberculosis K85]
 gi|294994529|ref|ZP_06800220.1| putative metalloprotease [Mycobacterium tuberculosis 210]
 gi|297634969|ref|ZP_06952749.1| putative metalloprotease [Mycobacterium tuberculosis KZN 4207]
 gi|297731961|ref|ZP_06961079.1| putative metalloprotease [Mycobacterium tuberculosis KZN R506]
 gi|298525849|ref|ZP_07013258.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|313659295|ref|ZP_07816175.1| metal-binding heat shock protein [Mycobacterium tuberculosis KZN
           V2475]
 gi|54040529|sp|P67135|RRMF_MYCBO RecName: Full=Probable rRNA maturation factor
 gi|54042953|sp|P67134|RRMF_MYCTU RecName: Full=Probable rRNA maturation factor
 gi|171704548|sp|A1KL57|RRMF_MYCBP RecName: Full=Probable rRNA maturation factor
 gi|172048108|sp|A5U560|RRMF_MYCTA RecName: Full=Probable rRNA maturation factor
 gi|13882146|gb|AAK46730.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124601568|gb|EAY60578.1| hypothetical protein TBCG_02311 [Mycobacterium tuberculosis C]
 gi|134150658|gb|EBA42703.1| hypothetical protein TBHG_02306 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|298495643|gb|EFI30937.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 177

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 20/159 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +   E  L ++   V AK   N             ELS++  D+  +  L
Sbjct: 1   MSIEVANESGIDVSEAELVSVARFVIAKMDVN----------PCAELSMLLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           +  +  +  PT+V+SFP           A   G S  MLGDIVL  E    +A   G   
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPS--MLGDIVLCPEFAAEQAAAAGHSL 108

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            + L  L IHG LHLLGYDH +  +   M  L+  +LE+
Sbjct: 109 GHELALLTIHGVLHLLGYDHAEPDEEKEMFALQDRLLEE 147


>gi|291296194|ref|YP_003507592.1| hypothetical protein Mrub_1814 [Meiothermus ruber DSM 1279]
 gi|290471153|gb|ADD28572.1| protein of unknown function UPF0054 [Meiothermus ruber DSM 1279]
          Length = 140

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L+L+ T+ + I  L  ++ G D PT+VLSFPT +   D      LGDIV++ +    +A 
Sbjct: 37  LTLILTNDNEIRALKQQHWGEDAPTDVLSFPT-YEPGDPFIPPHLGDIVISLDTARRQAE 95

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            LG   ++ +  L  H   HLLG+DH  + +      ++  ILE
Sbjct: 96  QLGHSLQHEVKVLAAHSLWHLLGHDHRSETEWEGFRRVQARILE 139


>gi|254392584|ref|ZP_05007761.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294812551|ref|ZP_06771194.1| Putative metalloprotease [Streptomyces clavuligerus ATCC 27064]
 gi|326440996|ref|ZP_08215730.1| metal-binding heat shock protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197706248|gb|EDY52060.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294325150|gb|EFG06793.1| Putative metalloprotease [Streptomyces clavuligerus ATCC 27064]
          Length = 165

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDAEAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEAN--VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+   +      G   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVATRQGAEAPTGHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|149919545|ref|ZP_01908025.1| hypothetical protein PPSIR1_10855 [Plesiocystis pacifica SIR-1]
 gi|149819670|gb|EDM79097.1| hypothetical protein PPSIR1_10855 [Plesiocystis pacifica SIR-1]
          Length = 166

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLA 107
           +   E +  L +  TD   +  L+  Y G + PT+VLSF     + DG   L  GD+VL 
Sbjct: 40  HIPPEELAVLGVRITDDEEMSALHLRYMGEEGPTDVLSF-----TGDGPGDL--GDLVLD 92

Query: 108 YEIIEIEANVLGKEFE-NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
           ++ IE +A         +    L++HG  HL G+DH D  +   M   ER +L  LG+  
Sbjct: 93  WQAIERQAAAPTDAARLDEATVLMVHGLAHLTGHDHRDRVEGRRMHLDERRVLRSLGVAS 152

Query: 167 P 167
           P
Sbjct: 153 P 153


>gi|114326780|ref|YP_743937.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1]
 gi|122328235|sp|Q0BVY8|RRMF_GRABC RecName: Full=Probable rRNA maturation factor
 gi|114314954|gb|ABI61014.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
          Length = 176

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 7/104 (6%)

Query: 67  IETLNFEYRGIDKPTNVLSF-PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           +  LN  +RG DKPTNVL+F P     ++G      G+IVLA  ++  EA    K   +H
Sbjct: 77  VRRLNARHRGKDKPTNVLTFEPVGMPGAEG------GEIVLALGVVLREAKAARKRPVHH 130

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           L HL++HG LHL G+DH    DA  ME  E  I+  LG+ +P++
Sbjct: 131 LAHLLVHGVLHLHGHDHHHAGDARRMEAEEARIMRSLGMPNPWK 174


>gi|255327126|ref|ZP_05368201.1| putative metalloprotease AAur_2230 [Rothia mucilaginosa ATCC 25296]
 gi|255295744|gb|EET75086.1| putative metalloprotease AAur_2230 [Rothia mucilaginosa ATCC 25296]
          Length = 173

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 4/118 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEI 113
           LS+   +   +E ++ E+  +   T+V+SFP       + +  SS MLGDI+L   +   
Sbjct: 54  LSIAIVNEDEMERVHIEWMDLPGATDVMSFPMDELEPGTPENPSSGMLGDIILCPPVAAR 113

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
           +    G    + L  L  HG LH LGYDH   ++   M G++RSILE+ LG   P E 
Sbjct: 114 QGADAGHSTLDELCLLTTHGILHCLGYDHGTAEEEAEMFGIQRSILEEFLGRPAPVET 171


>gi|217034240|ref|ZP_03439658.1| hypothetical protein HP9810_2g19 [Helicobacter pylori 98-10]
 gi|216943300|gb|EEC22762.1| hypothetical protein HP9810_2g19 [Helicobacter pylori 98-10]
          Length = 142

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV   + R   +N ++RG D  T+VLSFP      +  S   LG +V+   + +
Sbjct: 28  QIIELVLVSDKTMR--EINRDFRGCDYATDVLSFPL-----EAISHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|15609504|ref|NP_216883.1| putative metalloprotease [Mycobacterium tuberculosis H37Rv]
 gi|31793544|ref|NP_856037.1| putative metalloprotease [Mycobacterium bovis AF2122/97]
 gi|121638246|ref|YP_978470.1| putative metalloprotease [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148662199|ref|YP_001283722.1| putative metalloprotease [Mycobacterium tuberculosis H37Ra]
 gi|148823570|ref|YP_001288324.1| putative metalloprotease [Mycobacterium tuberculosis F11]
 gi|224990740|ref|YP_002645427.1| hypothetical protein JTY_2375 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798555|ref|YP_003031556.1| hypothetical protein TBMG_01608 [Mycobacterium tuberculosis KZN
           1435]
 gi|289443888|ref|ZP_06433632.1| metalloprotease [Mycobacterium tuberculosis T46]
 gi|289448009|ref|ZP_06437753.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553843|ref|ZP_06443053.1| hypothetical protein TBXG_01593 [Mycobacterium tuberculosis KZN
           605]
 gi|289570510|ref|ZP_06450737.1| hypothetical protein TBJG_00877 [Mycobacterium tuberculosis T17]
 gi|289575061|ref|ZP_06455288.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746145|ref|ZP_06505523.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289750966|ref|ZP_06510344.1| hypothetical protein TBDG_01176 [Mycobacterium tuberculosis T92]
 gi|289754472|ref|ZP_06513850.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758490|ref|ZP_06517868.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289762533|ref|ZP_06521911.1| hypothetical protein TBIG_01770 [Mycobacterium tuberculosis GM
           1503]
 gi|308232114|ref|ZP_07414969.2| hypothetical protein TMAG_02926 [Mycobacterium tuberculosis
           SUMu001]
 gi|308369698|ref|ZP_07418742.2| hypothetical protein TMBG_00911 [Mycobacterium tuberculosis
           SUMu002]
 gi|308370990|ref|ZP_07423477.2| hypothetical protein TMCG_00467 [Mycobacterium tuberculosis
           SUMu003]
 gi|308372215|ref|ZP_07427838.2| hypothetical protein TMDG_00845 [Mycobacterium tuberculosis
           SUMu004]
 gi|308373392|ref|ZP_07432143.2| hypothetical protein TMEG_02734 [Mycobacterium tuberculosis
           SUMu005]
 gi|308374561|ref|ZP_07436540.2| hypothetical protein TMFG_01331 [Mycobacterium tuberculosis
           SUMu006]
 gi|308375864|ref|ZP_07445354.2| hypothetical protein TMGG_00928 [Mycobacterium tuberculosis
           SUMu007]
 gi|308376991|ref|ZP_07440782.2| hypothetical protein TMHG_01561 [Mycobacterium tuberculosis
           SUMu008]
 gi|308377993|ref|ZP_07481176.2| hypothetical protein TMIG_01044 [Mycobacterium tuberculosis
           SUMu009]
 gi|308379183|ref|ZP_07485405.2| hypothetical protein TMJG_00637 [Mycobacterium tuberculosis
           SUMu010]
 gi|308380346|ref|ZP_07489619.2| hypothetical protein TMKG_00630 [Mycobacterium tuberculosis
           SUMu011]
 gi|308404861|ref|ZP_07494158.2| hypothetical protein TMLG_02116 [Mycobacterium tuberculosis
           SUMu012]
 gi|2078032|emb|CAB08472.1| UNKNOWN [Mycobacterium tuberculosis H37Rv]
 gi|31619137|emb|CAD97249.1| FUNCTION UNKNOWN [Mycobacterium bovis AF2122/97]
 gi|121493894|emb|CAL72369.1| Function unknown [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148506351|gb|ABQ74160.1| hypothetical protein MRA_2391 [Mycobacterium tuberculosis H37Ra]
 gi|148722097|gb|ABR06722.1| hypothetical protein TBFG_12393 [Mycobacterium tuberculosis F11]
 gi|224773853|dbj|BAH26659.1| hypothetical protein JTY_2375 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253320058|gb|ACT24661.1| hypothetical protein TBMG_01608 [Mycobacterium tuberculosis KZN
           1435]
 gi|289416807|gb|EFD14047.1| metalloprotease [Mycobacterium tuberculosis T46]
 gi|289420967|gb|EFD18168.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438475|gb|EFD20968.1| hypothetical protein TBXG_01593 [Mycobacterium tuberculosis KZN
           605]
 gi|289539492|gb|EFD44070.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544264|gb|EFD47912.1| hypothetical protein TBJG_00877 [Mycobacterium tuberculosis T17]
 gi|289686673|gb|EFD54161.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691553|gb|EFD58982.1| hypothetical protein TBDG_01176 [Mycobacterium tuberculosis T92]
 gi|289695059|gb|EFD62488.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710039|gb|EFD74055.1| hypothetical protein TBIG_01770 [Mycobacterium tuberculosis GM
           1503]
 gi|289714054|gb|EFD78066.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308214951|gb|EFO74350.1| hypothetical protein TMAG_02926 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326727|gb|EFP15578.1| hypothetical protein TMBG_00911 [Mycobacterium tuberculosis
           SUMu002]
 gi|308330140|gb|EFP18991.1| hypothetical protein TMCG_00467 [Mycobacterium tuberculosis
           SUMu003]
 gi|308334001|gb|EFP22852.1| hypothetical protein TMDG_00845 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337782|gb|EFP26633.1| hypothetical protein TMEG_02734 [Mycobacterium tuberculosis
           SUMu005]
 gi|308341463|gb|EFP30314.1| hypothetical protein TMFG_01331 [Mycobacterium tuberculosis
           SUMu006]
 gi|308344949|gb|EFP33800.1| hypothetical protein TMGG_00928 [Mycobacterium tuberculosis
           SUMu007]
 gi|308349260|gb|EFP38111.1| hypothetical protein TMHG_01561 [Mycobacterium tuberculosis
           SUMu008]
 gi|308353880|gb|EFP42731.1| hypothetical protein TMIG_01044 [Mycobacterium tuberculosis
           SUMu009]
 gi|308357825|gb|EFP46676.1| hypothetical protein TMJG_00637 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361771|gb|EFP50622.1| hypothetical protein TMKG_00630 [Mycobacterium tuberculosis
           SUMu011]
 gi|308365393|gb|EFP54244.1| hypothetical protein TMLG_02116 [Mycobacterium tuberculosis
           SUMu012]
 gi|323719034|gb|EGB28182.1| hypothetical protein TMMG_01659 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903983|gb|EGE50916.1| hypothetical protein TBPG_01872 [Mycobacterium tuberculosis W-148]
 gi|328458323|gb|AEB03746.1| hypothetical protein TBSG_01617 [Mycobacterium tuberculosis KZN
           4207]
          Length = 182

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 20/159 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +   E  L ++   V AK   N             ELS++  D+  +  L
Sbjct: 6   MSIEVANESGIDVSEAELVSVARFVIAKMDVN----------PCAELSMLLLDTAAMADL 55

Query: 71  NFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           +  +  +  PT+V+SFP           A   G S  MLGDIVL  E    +A   G   
Sbjct: 56  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPS--MLGDIVLCPEFAAEQAAAAGHSL 113

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            + L  L IHG LHLLGYDH +  +   M  L+  +LE+
Sbjct: 114 GHELALLTIHGVLHLLGYDHAEPDEEKEMFALQDRLLEE 152


>gi|118475619|ref|YP_891672.1| putative metalloprotease [Campylobacter fetus subsp. fetus 82-40]
 gi|145558830|sp|A0RN89|RRMF_CAMFF RecName: Full=Probable rRNA maturation factor
 gi|28974225|gb|AAO64226.1| hypothetical protein Cf0020 [Campylobacter fetus]
 gi|118414845|gb|ABK83265.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
           82-40]
          Length = 134

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+ LVF  +  +  +N + RG+DK T+VLSFP  +          +G IV+  ++   +
Sbjct: 22  AEVELVFVSNEEMREINRDKRGMDKTTDVLSFPLTYVPH-----FPIGSIVINTDLASSK 76

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           A  LG   ++ +  L  HG LH+LG+DH +D     M   E SI+E +G+
Sbjct: 77  ALELGHSTDDEIALLFTHGLLHILGFDHENDDGE--MRRKEISIMEHMGL 124


>gi|42520569|ref|NP_966484.1| hypothetical protein WD0726 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|99034707|ref|ZP_01314643.1| hypothetical protein Wendoof_01000541 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|225630499|ref|YP_002727290.1| hypothetical protein WRi_007500 [Wolbachia sp. wRi]
 gi|59799057|sp|Q73H48|RRMF_WOLPM RecName: Full=Probable rRNA maturation factor
 gi|254806603|sp|C0R3K7|RRMF_WOLWR RecName: Full=Probable rRNA maturation factor
 gi|42410308|gb|AAS14418.1| conserved hypothetical protein TIGR00043 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|225592480|gb|ACN95499.1| conserved hypothetical protein [Wolbachia sp. wRi]
          Length = 150

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 4/109 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+   D   +  LN ++R +DKPTNVLSFP    S++ C    LGDI ++ + I+ E++
Sbjct: 42  ISIALADDDLLHQLNLKFREMDKPTNVLSFPYEQLSNE-CD---LGDIAISIDTIKRESH 97

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                   H+ H+++HG LHLLGYDH    +  +M+ LER IL  LG N
Sbjct: 98  EYYIPILAHIAHMLVHGLLHLLGYDHQKKDEEIIMKNLEREILASLGYN 146


>gi|158313947|ref|YP_001506455.1| putative metalloprotease [Frankia sp. EAN1pec]
 gi|238686840|sp|A8KYW3|RRMF_FRASN RecName: Full=Probable rRNA maturation factor
 gi|158109352|gb|ABW11549.1| protein of unknown function UPF0054 [Frankia sp. EAN1pec]
          Length = 159

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCS-----SLMLGDIVL 106
           + ELS++  +   +  L+  Y   + PT+VL+FP   AF  S   S     + +LGD+VL
Sbjct: 35  LAELSVMLVEIDAMTDLHVRYMAEEGPTDVLAFPQDEAFEPSWSESPEEDPTTLLGDVVL 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             E+   +A   G   E  L  L  HG LHLLGYDH + ++   M  L+ S+L
Sbjct: 95  CPEVARRQAAQAGHGMERELHILCTHGILHLLGYDHAEPEEEREMWKLQNSLL 147


>gi|195978546|ref|YP_002123790.1| putative metalloprotease [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|226701650|sp|B4U460|RRMF_STREM RecName: Full=Probable rRNA maturation factor
 gi|195975251|gb|ACG62777.1| putative metal-dependent hydrolase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 165

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S       P AF+  D       + ++    
Sbjct: 37  EMAVTFVTNDRSHALNLEYRDTDRPTDVISLEYKPELPIAFSQEDLELDPDLAGMLQEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISVDKAHEQAEAYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|118618894|ref|YP_907226.1| putative metalloprotease [Mycobacterium ulcerans Agy99]
 gi|183983657|ref|YP_001851948.1| metal-dependent hydrolase [Mycobacterium marinum M]
 gi|145558814|sp|A0PTT6|RRMF_MYCUA RecName: Full=Probable rRNA maturation factor
 gi|238690927|sp|B2HLB7|RRMF_MYCMM RecName: Full=Probable rRNA maturation factor
 gi|118571004|gb|ABL05755.1| conserved hypothetical metal-dependent hydrolase [Mycobacterium
           ulcerans Agy99]
 gi|183176983|gb|ACC42093.1| conserved hypothetical metal-dependent hydrolase [Mycobacterium
           marinum M]
          Length = 178

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           + L+S   FV   +      ELS+V  D+  +  L+  +  +  PT+V+SFP       G
Sbjct: 16  TELVSVARFVIGKMDVNPGAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGG 75

Query: 96  ------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                     MLGDIVL  E    +A   G    + L  L IHG LHLLGYDH +  +  
Sbjct: 76  RPDAPEPGPAMLGDIVLCPEFAAEQAAAAGHSLGHELALLTIHGVLHLLGYDHGEPDEEK 135

Query: 150 VMEGLERSILED 161
            M  L+  +LE+
Sbjct: 136 EMFALQDRLLEE 147


>gi|332522950|ref|ZP_08399202.1| translation metalloprotein YbeY [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314214|gb|EGJ27199.1| translation metalloprotein YbeY [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 165

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----------GCSS 98
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F  SD               
Sbjct: 37  EMSVTFVTNERSHELNLEYRDTDRPTDVISLEYKPERPILFDESDLEDNPDLAEMLAEFD 96

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISIDKAREQAQEYGHSFEREMGFLAVHGFLHITGYDHYTPEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|154509439|ref|ZP_02045081.1| hypothetical protein ACTODO_01970 [Actinomyces odontolyticus ATCC
           17982]
 gi|293189526|ref|ZP_06608246.1| putative metalloprotease [Actinomyces odontolyticus F0309]
 gi|153799073|gb|EDN81493.1| hypothetical protein ACTODO_01970 [Actinomyces odontolyticus ATCC
           17982]
 gi|292821616|gb|EFF80555.1| putative metalloprotease [Actinomyces odontolyticus F0309]
          Length = 149

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEI 110
            E++++F +   +E L+  +  +  PT+V+SFP        +       MLGDI +  ++
Sbjct: 34  AEVNIIFIEPEPMEDLHVRWLDLPGPTDVMSFPMDELRPGTADHPTPPGMLGDICICPQV 93

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLGYDH  D +  VM  L+R +L
Sbjct: 94  AARQAAESGHSAAEEMLLLATHGMLHLLGYDHATDAEREVMFALQRKLL 142


>gi|158520794|ref|YP_001528664.1| hypothetical protein Dole_0777 [Desulfococcus oleovorans Hxd3]
 gi|158509620|gb|ABW66587.1| protein of unknown function UPF0054 [Desulfococcus oleovorans Hxd3]
          Length = 97

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N  Y G   PTNV++FP    +    +  +LGD+V++ +    EA  +G   E     L
Sbjct: 1   MNQVYLGRTGPTNVIAFPMQEGAFADLTPGLLGDVVISADTALREARSMGVSLEARFTEL 60

Query: 130 IIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
           +IHG LHL GYDH   D +A  ME   R +L+ L
Sbjct: 61  LIHGILHLSGYDHEQSDTEAEKMEAKTRELLKML 94


>gi|328950644|ref|YP_004367979.1| metalloprotease ybeY [Marinithermus hydrothermalis DSM 14884]
 gi|328450968|gb|AEB11869.1| metalloprotease ybeY [Marinithermus hydrothermalis DSM 14884]
          Length = 141

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 11/129 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           LR L     AK +  L   GY        ++++     RI  L   Y G D PT+VLSFP
Sbjct: 16  LRPLLRAKLAKLMEEL---GYAQHA----VTVILCSDRRIRELKRRYWGEDAPTDVLSFP 68

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
           T F   D      LGDI ++ +  + +A   G   E+ ++ L  H   HLLG+DH  ++ 
Sbjct: 69  T-FEPGDPFIPPHLGDIWISLDTAQRQAREAGHTLEDEVLVLAAHALWHLLGHDHASEE- 126

Query: 148 ACVMEGLER 156
               +G  R
Sbjct: 127 --AWQGFRR 133


>gi|78185693|ref|YP_378127.1| hypothetical protein Syncc9902_2126 [Synechococcus sp. CC9902]
 gi|123580639|sp|Q3AUM7|RRMF_SYNS9 RecName: Full=Probable rRNA maturation factor
 gi|78169987|gb|ABB27084.1| Protein of unknown function UPF0054 [Synechococcus sp. CC9902]
          Length = 180

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 2/111 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS--SLMLGDIVLAYEIIE 112
           V L L FT+   I  LN ++R    PT+VLSF     + D     ++ LGDI+++ +  +
Sbjct: 57  VSLGLHFTNDAGIAELNSQWRQKSGPTDVLSFAALDDTPDWLEGEAVELGDIIVSVDTAQ 116

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
            +A          L  LI HG LHLLG+DH D++    M  L+  +L+  G
Sbjct: 117 RQAQNHNHSLGYELHWLISHGLLHLLGWDHPDERRLSGMLALQERLLDSTG 167


>gi|58697454|ref|ZP_00372745.1| putative metal-dependent hydrolase [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58536113|gb|EAL59737.1| putative metal-dependent hydrolase [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 160

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 4/109 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+   D   +  LN ++R +DKPTNVLSFP    S++ C    LGDI ++ + I+ E++
Sbjct: 52  ISIALADDDLLHQLNLKFREMDKPTNVLSFPYEQLSNE-CD---LGDIAISIDTIKRESH 107

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                   H+ H+++HG LHLLGYDH    +  +M+ LER IL  LG N
Sbjct: 108 EYYIPILAHIAHMLVHGLLHLLGYDHQKKDEEIIMKNLEREILASLGYN 156


>gi|282898521|ref|ZP_06306511.1| Protein of unknown function UPF0054 [Raphidiopsis brookii D9]
 gi|281196687|gb|EFA71593.1| Protein of unknown function UPF0054 [Raphidiopsis brookii D9]
          Length = 174

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 6/115 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSD---GCSSLMLGDIVLAYE 109
           E+ L  T+  +I+ LN +YR  D+PT+VL+F      F  ++       L LGDIV++ +
Sbjct: 56  EIGLQLTNDAQIQELNAQYRQKDQPTDVLAFAALENNFPYTEEMLASQPLYLGDIVISID 115

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
               +A          L  L  HG LHLLG+DH D++    M   +  +L+ +GI
Sbjct: 116 TAIRQAQEREHNLTTELAWLSAHGLLHLLGWDHPDEQSLIEMLNKQSMLLKLVGI 170


>gi|313891316|ref|ZP_07824934.1| translation metalloprotein YbeY [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313120383|gb|EFR43504.1| translation metalloprotein YbeY [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 165

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----------GCSS 98
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F  SD               
Sbjct: 37  EMSVTFVTTERSHELNLEYRDTDRPTDVISLEYKPERPILFEESDLENNPDLAEMLAEFD 96

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISVDKAREQAQEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|190570991|ref|YP_001975349.1| conserved hypothetical protein TIGR00043 [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213019508|ref|ZP_03335314.1| hypothetical protein C1A_162 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238058883|sp|B3CLC0|RRMF_WOLPP RecName: Full=Probable rRNA maturation factor
 gi|190357263|emb|CAQ54687.1| conserved hypothetical protein TIGR00043 [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212994930|gb|EEB55572.1| hypothetical protein C1A_162 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|222825043|dbj|BAH22201.1| hypothetical protein [Wolbachia endosymbiont of Cadra cautella]
          Length = 152

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 4/103 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+   D + +  LN ++R IDKPTNVLSFP    SS+ C    LGDI +A + IE E++
Sbjct: 42  ISIALADDNLLHQLNLKFREIDKPTNVLSFPCEQLSSE-CD---LGDIAIAVDTIERESH 97

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
                   H  H+++HG LHLLGYDH  + +  +M+ LE  IL
Sbjct: 98  EYCISILTHTAHMLVHGLLHLLGYDHQKEDEEIIMKSLESKIL 140


>gi|218513639|ref|ZP_03510479.1| hypothetical protein Retl8_07906 [Rhizobium etli 8C-3]
          Length = 92

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 11 LDLQIAVENALWGDEIHLRTLC-EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
          LD+QI++EN  W +E  L   C  V+ A AV    S+         E+SLVFTD   I+ 
Sbjct: 4  LDIQISIENIGWPEEETLLAFCGRVLGAAAVYLRDSEKQPFPTMPPEVSLVFTDDASIQD 63

Query: 70 LNFEYRGIDKPTNVLSFPTAFASSDG 95
          +N E+RG DK TNVLSFP AF    G
Sbjct: 64 INAEWRGKDKATNVLSFP-AFPVQPG 88


>gi|262195532|ref|YP_003266741.1| hypothetical protein Hoch_2305 [Haliangium ochraceum DSM 14365]
 gi|262078879|gb|ACY14848.1| protein of unknown function UPF0054 [Haliangium ochraceum DSM
           14365]
          Length = 172

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 19/113 (16%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------LGDIVLAY 108
           +E+SL  TD   I  LN +YRG D PT+VL+F       +G   L       LGD++++ 
Sbjct: 43  LEVSLRLTDDDEIRALNRDYRGKDTPTDVLAFAMREGPQEGMPPLAAGEAEYLGDLIIS- 101

Query: 109 EIIEIEANVLGK-------EFENHLVHLII---HGFLHLLGYDHVDDKDACVM 151
             +   A  L +       E E  L  L+    HG  HLLGYDH DD +   M
Sbjct: 102 --VPTAAQQLARKRPMDVPEREPLLAELLFLSAHGLCHLLGYDHQDDAEEAEM 152


>gi|225868114|ref|YP_002744062.1| hypothetical protein SZO_05050 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701390|emb|CAW98464.1| conserved hypothetical protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 181

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S       P AF+  D       + ++    
Sbjct: 53  EMAVTFVTNDRSHALNLEYRDTDRPTDVISLEYKPELPIAFSQEDLELDPDLAGMLQEFD 112

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 113 AYIGELFISVDKAHEQAEAYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 172

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 173 LTAYGLT 179


>gi|148992898|ref|ZP_01822517.1| hypothetical protein CGSSp9BS68_07482 [Streptococcus pneumoniae
           SP9-BS68]
 gi|149019558|ref|ZP_01834877.1| hypothetical protein CGSSp23BS72_03128 [Streptococcus pneumoniae
           SP23-BS72]
 gi|168490214|ref|ZP_02714413.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|147928350|gb|EDK79366.1| hypothetical protein CGSSp9BS68_07482 [Streptococcus pneumoniae
           SP9-BS68]
 gi|147930933|gb|EDK81913.1| hypothetical protein CGSSp23BS72_03128 [Streptococcus pneumoniae
           SP23-BS72]
 gi|183571419|gb|EDT91947.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|332073300|gb|EGI83779.1| uncharacterized UPF0054 family protein [Streptococcus pneumoniae
           GA17570]
          Length = 165

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRNTDRPTDVISLEYKPELEIAFDEEDLLENSELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISSDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|194397080|ref|YP_002037602.1| putative metalloprotease [Streptococcus pneumoniae G54]
 gi|226702103|sp|B5E486|RRMF_STRP4 RecName: Full=Probable rRNA maturation factor
 gi|194356747|gb|ACF55195.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
          Length = 165

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELEIAFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAXMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|21220993|ref|NP_626772.1| putative metalloprotease [Streptomyces coelicolor A3(2)]
 gi|256787845|ref|ZP_05526276.1| putative metalloprotease [Streptomyces lividans TK24]
 gi|289771730|ref|ZP_06531108.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|26006934|sp|Q9L2L4|RRMF_STRCO RecName: Full=Probable rRNA maturation factor
 gi|6723881|emb|CAB66427.1| conserved hypothetical protein SCC117.06 [Streptomyces coelicolor
           A3(2)]
 gi|289701929|gb|EFD69358.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 165

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDAEAMEQLHIQWMDLPGPTDVMSFPMDELRPPSKDEEEAPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+   +      E   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAAKQGAEAPTEHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|170289192|ref|YP_001739430.1| hypothetical protein TRQ2_1403 [Thermotoga sp. RQ2]
 gi|238688755|sp|B1LBP9|RRMF_THESQ RecName: Full=Probable rRNA maturation factor
 gi|170176695|gb|ACB09747.1| protein of unknown function UPF0054 [Thermotoga sp. RQ2]
          Length = 150

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 28  LRTLCEVVFAKAVSNLISK-GYFVKENI--VELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +R L E   +K + NL  K    VK+ I  V ++++      I+ LN ++RG D PT+VL
Sbjct: 2   IRILGEGKGSKLLENLKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRGQDLPTDVL 61

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-V 143
           +FP            + G+I +   I+E  A      FE  L+ ++IHG LHL GYDH  
Sbjct: 62  TFPL-------MEEDVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEF 114

Query: 144 DDKDACVMEGLERSILEDL 162
           +D+++  M   ++  +E++
Sbjct: 115 EDRNSKEMFEKQKKYVEEV 133


>gi|15900844|ref|NP_345448.1| putative metalloprotease [Streptococcus pneumoniae TIGR4]
 gi|111657971|ref|ZP_01408678.1| hypothetical protein SpneT_02000860 [Streptococcus pneumoniae
           TIGR4]
 gi|149010387|ref|ZP_01831758.1| hypothetical protein CGSSp19BS75_03512 [Streptococcus pneumoniae
           SP19-BS75]
 gi|182683913|ref|YP_001835660.1| hypothetical protein SPCG_0943 [Streptococcus pneumoniae CGSP14]
 gi|303259879|ref|ZP_07345854.1| hypothetical protein CGSSp9vBS293_10008 [Streptococcus pneumoniae
           SP-BS293]
 gi|303262293|ref|ZP_07348237.1| hypothetical protein CGSSp14BS292_01338 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264715|ref|ZP_07350633.1| hypothetical protein CGSSpBS397_06729 [Streptococcus pneumoniae
           BS397]
 gi|303267322|ref|ZP_07353182.1| hypothetical protein CGSSpBS457_11366 [Streptococcus pneumoniae
           BS457]
 gi|303269127|ref|ZP_07354906.1| hypothetical protein CGSSpBS458_03184 [Streptococcus pneumoniae
           BS458]
 gi|29428248|sp|Q97R63|RRMF_STRPN RecName: Full=Probable rRNA maturation factor
 gi|238691155|sp|B2IPC1|RRMF_STRPS RecName: Full=Probable rRNA maturation factor
 gi|14972442|gb|AAK75088.1| conserved hypothetical protein TIGR00043 [Streptococcus pneumoniae
           TIGR4]
 gi|147764868|gb|EDK71797.1| hypothetical protein CGSSp19BS75_03512 [Streptococcus pneumoniae
           SP19-BS75]
 gi|182629247|gb|ACB90195.1| hypothetical protein SPCG_0943 [Streptococcus pneumoniae CGSP14]
 gi|301801810|emb|CBW34521.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302636616|gb|EFL67107.1| hypothetical protein CGSSp14BS292_01338 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639084|gb|EFL69544.1| hypothetical protein CGSSpBS293_10008 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641314|gb|EFL71682.1| hypothetical protein CGSSpBS458_03184 [Streptococcus pneumoniae
           BS458]
 gi|302643132|gb|EFL73419.1| hypothetical protein CGSSpBS457_11366 [Streptococcus pneumoniae
           BS457]
 gi|302645802|gb|EFL76031.1| hypothetical protein CGSSpBS397_06729 [Streptococcus pneumoniae
           BS397]
          Length = 165

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRNTDRPTDVISLEYKPELEIAFDEEDLLENSELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|227503130|ref|ZP_03933179.1| metalloprotease [Corynebacterium accolens ATCC 49725]
 gi|227076191|gb|EEI14154.1| metalloprotease [Corynebacterium accolens ATCC 49725]
          Length = 206

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 11/100 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDG-------CSSLMLGD 103
            E ++   D   IE L+  +  ++ PT+V+SFP    T  A+S G           MLGD
Sbjct: 36  AECTITCVDLKSIEDLHIRWMDLEGPTDVMSFPMDELTPGATSGGGRPDAADPGPAMLGD 95

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           IVL  E    +A+  G    + L  L +HG LHLLGYDH 
Sbjct: 96  IVLCPEFALRQADAAGHSLGHELALLTVHGCLHLLGYDHA 135


>gi|322411294|gb|EFY02202.1| putative metalloprotease [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 165

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F+  D       + +M    
Sbjct: 37  EMSVTFVTNARSHELNLEYRDTDRPTDVISLEYKPETPILFSQDDLAADPSLAEMMAEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISIDKAREQAQDYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|108563524|ref|YP_627840.1| putative metalloprotease [Helicobacter pylori HPAG1]
 gi|122386286|sp|Q1CSA6|RRMF_HELPH RecName: Full=Probable rRNA maturation factor
 gi|107837297|gb|ABF85166.1| hypothetical protein HPAG1_1099 [Helicobacter pylori HPAG1]
          Length = 140

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   EN +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHSLENEIALLFIHGVLHLLGYDHEKDK 114


>gi|87310535|ref|ZP_01092664.1| hypothetical protein DSM3645_07710 [Blastopirellula marina DSM
           3645]
 gi|87286756|gb|EAQ78661.1| hypothetical protein DSM3645_07710 [Blastopirellula marina DSM
           3645]
          Length = 165

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENI--VELSLVFTDSHRIETLNFEYRGIDKPTN 82
           EI  RT       +AV   I+   F  E+I   E+S+   D   I  +N  +   D PT+
Sbjct: 10  EITRRTQYAAPTDEAVRQAIA-AVFAGESIEAYEVSVALVDDAEIHEVNRRFLQHDYPTD 68

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           V++F    ++ D    L+ G+IV++ +    EA       ++  +  +IHG LHL+GYD 
Sbjct: 69  VVTF--NLSADD---DLLEGEIVISCQYAAAEAEKYQWPAKHETLLYVIHGALHLVGYDD 123

Query: 143 VDDKDACVMEGLERSILEDLGINDP 167
            +D+D   M  LER  LE +G+  P
Sbjct: 124 HEDEDRLTMRRLERVYLEQVGLEPP 148


>gi|225870933|ref|YP_002746880.1| hypothetical protein SEQ_1635 [Streptococcus equi subsp. equi 4047]
 gi|225700337|emb|CAW94643.1| conserved hypothetical protein [Streptococcus equi subsp. equi
           4047]
          Length = 181

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S       P AF+  D       + ++    
Sbjct: 53  EMAVTFVTNDRSHALNLEYRDTDRPTDVISLEYKPELPIAFSQEDLELDPDLAGMIQEFD 112

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 113 AYIGELFISVDKAHEQAEAYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 172

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 173 LTAYGLT 179


>gi|255292981|dbj|BAH90078.1| hypothetical protein [uncultured bacterium]
 gi|255293017|dbj|BAH90113.1| hypothetical protein [uncultured bacterium]
          Length = 152

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 9/128 (7%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFA 91
           + L+S   FV + +      ELS+V  D   +   + +Y     PT+VLSFP       +
Sbjct: 16  TGLVSLATFVLDQLRIHPMAELSVVLVDEATMSAYHEKYMNEPGPTDVLSFPMDELRPPS 75

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             +   + +LGD+VL   I   +A   G+E +    +L++HG LHL+G+DH   ++   M
Sbjct: 76  DDEEPPAGLLGDVVLCPTITSAQAAEHGREPDEEAEYLLVHGILHLVGFDHGTPEEKAEM 135

Query: 152 EGLERSIL 159
            GL+  +L
Sbjct: 136 FGLKDRLL 143


>gi|269792677|ref|YP_003317581.1| hypothetical protein Taci_1067 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100312|gb|ACZ19299.1| protein of unknown function UPF0054 [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 150

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 10/103 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYE 109
           VE+SL F +   +  +N +YR +D  T+VLSFP       F+   G   L LGD+++  +
Sbjct: 40  VEVSLSFVEPEAMREVNLKYRQVDSSTDVLSFPLWEEDGRFSPPVGWRWLPLGDVLVCVQ 99

Query: 110 IIEIEANVLGKEFENHLVHLII-HGFLHLLGYDHVDDKDACVM 151
            +E     LG+      V L+I HGFLHLLG+DH D++    M
Sbjct: 100 DVE----PLGEGDRARGVLLVIHHGFLHLLGFDHGDEEQRREM 138


>gi|296133914|ref|YP_003641161.1| protein of unknown function UPF0054 [Thermincola sp. JR]
 gi|296032492|gb|ADG83260.1| protein of unknown function UPF0054 [Thermincola potens JR]
          Length = 153

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 4/114 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            E+ +V  D   I  LN +YRG+D PT+VLSF           +    L+LGD+ ++ E 
Sbjct: 38  AEVGIVLVDDDYIHQLNKQYRGVDSPTDVLSFALIEDGEEEFFEEEEDLLLGDVFISVER 97

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            + +A   G  F   + +L  HG  HLLGYDH  +++  +M   E  +L  L I
Sbjct: 98  AQNQAEEYGHSFTREMAYLTAHGMFHLLGYDHNTEEERDIMREKEEQVLTGLNI 151


>gi|148998597|ref|ZP_01826037.1| hypothetical protein CGSSp11BS70_06353 [Streptococcus pneumoniae
           SP11-BS70]
 gi|149006356|ref|ZP_01830068.1| hypothetical protein CGSSp18BS74_03564 [Streptococcus pneumoniae
           SP18-BS74]
 gi|168575629|ref|ZP_02721565.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|307067624|ref|YP_003876590.1| putative metal-dependent hydrolase [Streptococcus pneumoniae AP200]
 gi|147755595|gb|EDK62642.1| hypothetical protein CGSSp11BS70_06353 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147762133|gb|EDK69095.1| hypothetical protein CGSSp18BS74_03564 [Streptococcus pneumoniae
           SP18-BS74]
 gi|183578494|gb|EDT99022.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|306409161|gb|ADM84588.1| Predicted metal-dependent hydrolase [Streptococcus pneumoniae
           AP200]
 gi|332075583|gb|EGI86051.1| hypothetical protein SPAR148_0923 [Streptococcus pneumoniae
           GA17545]
 gi|332202822|gb|EGJ16891.1| hypothetical protein SPAR69_0936 [Streptococcus pneumoniae GA41317]
          Length = 165

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELEIAFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|145558835|sp|Q5GS35|RRMF_WOLTR RecName: Full=Probable rRNA maturation factor
          Length = 150

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 4/109 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+   D + +  LN  +R ++KPTNVLSFP    SS+ C    LGDI ++ + +  E++
Sbjct: 42  ISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSE-CD---LGDIAISIDTVRKESD 97

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                   H+ H+++HG LHLLGYDH    +  VM+ LE  IL  LG N
Sbjct: 98  EYHIPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKILASLGYN 146


>gi|323704189|ref|ZP_08115768.1| protein of unknown function UPF0054 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536255|gb|EGB26027.1| protein of unknown function UPF0054 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 159

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEI 110
           F D+  I  LN  YR +DK T+VLSFP                D      +GDIV++ E 
Sbjct: 44  FVDNEEIHKLNKYYRNVDKETDVLSFPLVEFEEIYTDIDEEDDDLDEVQPIGDIVISLEK 103

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            + +A   G  F   + +L  H   HL+GYDH  + +  VM   E  ++  L I
Sbjct: 104 AKQQAEEYGHSFIREVAYLTAHSMFHLMGYDHETEDEKKVMRAKEEEVMRRLKI 157


>gi|312148985|gb|ADQ29056.1| conserved hypothetical protein [Borrelia burgdorferi N40]
          Length = 155

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLNVFYD--FVVSVLNALSISDF------ELSVILCDNAYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+V+++E ++  A     E
Sbjct: 50  QELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINYKIQGDLVISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILED 161
               L  + IHG LHL+GY H  +D     M  L+ +IL++
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFQKESMLILQENILKE 150


>gi|261839888|gb|ACX99653.1| hypothetical protein HPKB_1090 [Helicobacter pylori 52]
          Length = 140

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N ++RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDFRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|15902913|ref|NP_358463.1| putative metalloprotease [Streptococcus pneumoniae R6]
 gi|116516344|ref|YP_816337.1| putative metalloprotease [Streptococcus pneumoniae D39]
 gi|148984709|ref|ZP_01817977.1| hypothetical protein CGSSp3BS71_01657 [Streptococcus pneumoniae
           SP3-BS71]
 gi|148988410|ref|ZP_01819857.1| hypothetical protein CGSSp6BS73_06270 [Streptococcus pneumoniae
           SP6-BS73]
 gi|149002518|ref|ZP_01827452.1| hypothetical protein CGSSp14BS69_12356 [Streptococcus pneumoniae
           SP14-BS69]
 gi|168483036|ref|ZP_02707988.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|168485919|ref|ZP_02710427.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|168491056|ref|ZP_02715199.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|168494396|ref|ZP_02718539.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|169833180|ref|YP_001694412.1| putative metalloprotease [Streptococcus pneumoniae Hungary19A-6]
 gi|221231730|ref|YP_002510882.1| hypothetical protein SPN23F_08920 [Streptococcus pneumoniae ATCC
           700669]
 gi|225854471|ref|YP_002735983.1| putative metalloprotease [Streptococcus pneumoniae JJA]
 gi|225856625|ref|YP_002738136.1| putative metalloprotease [Streptococcus pneumoniae P1031]
 gi|225858760|ref|YP_002740270.1| putative metalloprotease [Streptococcus pneumoniae 70585]
 gi|225861146|ref|YP_002742655.1| putative metalloprotease [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650884|ref|ZP_04525136.1| putative metalloprotease [Streptococcus pneumoniae CCRI 1974]
 gi|237821334|ref|ZP_04597179.1| putative metalloprotease [Streptococcus pneumoniae CCRI 1974M2]
 gi|289167811|ref|YP_003446080.1| hypothetical protein smi_0968 [Streptococcus mitis B6]
 gi|298229557|ref|ZP_06963238.1| putative metalloprotease [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254474|ref|ZP_06978060.1| putative metalloprotease [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503023|ref|YP_003724963.1| metalloprotease [Streptococcus pneumoniae TCH8431/19A]
 gi|303254434|ref|ZP_07340540.1| putative metalloprotease [Streptococcus pneumoniae BS455]
 gi|307127482|ref|YP_003879513.1| hypothetical protein SP670_1352 [Streptococcus pneumoniae 670-6B]
 gi|307704697|ref|ZP_07641596.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK597]
 gi|307706465|ref|ZP_07643274.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK321]
 gi|307708602|ref|ZP_07645066.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|307709147|ref|ZP_07645606.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK564]
 gi|29428192|sp|Q8DQ35|RRMF_STRR6 RecName: Full=Probable rRNA maturation factor
 gi|122278777|sp|Q04KW1|RRMF_STRP2 RecName: Full=Probable rRNA maturation factor
 gi|238688290|sp|B1IBC7|RRMF_STRPI RecName: Full=Probable rRNA maturation factor
 gi|254799900|sp|C1C6U4|RRMF_STRP7 RecName: Full=Probable rRNA maturation factor
 gi|254799998|sp|C1CRT3|RRMF_STRZT RecName: Full=Probable rRNA maturation factor
 gi|254807259|sp|B8ZP64|RRMF_STRPJ RecName: Full=Probable rRNA maturation factor
 gi|254807268|sp|C1CDW2|RRMF_STRZJ RecName: Full=Probable rRNA maturation factor
 gi|254807292|sp|C1CK48|RRMF_STRZP RecName: Full=Probable rRNA maturation factor
 gi|15458473|gb|AAK99673.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116076920|gb|ABJ54640.1| conserved hypothetical protein TIGR00043 [Streptococcus pneumoniae
           D39]
 gi|147759455|gb|EDK66447.1| hypothetical protein CGSSp14BS69_12356 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147923100|gb|EDK74215.1| hypothetical protein CGSSp3BS71_01657 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147926091|gb|EDK77165.1| hypothetical protein CGSSp6BS73_06270 [Streptococcus pneumoniae
           SP6-BS73]
 gi|168995682|gb|ACA36294.1| conserved hypothetical protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172043366|gb|EDT51412.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|183571014|gb|EDT91542.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|183574714|gb|EDT95242.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|183575625|gb|EDT96153.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|220674190|emb|CAR68718.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225721312|gb|ACO17166.1| conserved hypothetical protein [Streptococcus pneumoniae 70585]
 gi|225722204|gb|ACO18057.1| conserved hypothetical protein [Streptococcus pneumoniae JJA]
 gi|225724973|gb|ACO20825.1| conserved hypothetical protein [Streptococcus pneumoniae P1031]
 gi|225727792|gb|ACO23643.1| conserved hypothetical protein [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|288907378|emb|CBJ22215.1| conserved hypothetical protein [Streptococcus mitis B6]
 gi|298238618|gb|ADI69749.1| metalloprotease [Streptococcus pneumoniae TCH8431/19A]
 gi|301799943|emb|CBW32526.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
 gi|302598601|gb|EFL65641.1| putative metalloprotease [Streptococcus pneumoniae BS455]
 gi|306484544|gb|ADM91413.1| conserved hypothetical protein [Streptococcus pneumoniae 670-6B]
 gi|307615351|gb|EFN94560.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|307618175|gb|EFN97333.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK321]
 gi|307620093|gb|EFN99210.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK564]
 gi|307621744|gb|EFO00782.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK597]
 gi|327389245|gb|EGE87590.1| hypothetical protein SPAR5_0931 [Streptococcus pneumoniae GA04375]
 gi|332076241|gb|EGI86707.1| hypothetical protein SPAR68_0966 [Streptococcus pneumoniae GA41301]
 gi|332201433|gb|EGJ15503.1| hypothetical protein SPAR93_1028 [Streptococcus pneumoniae GA47368]
          Length = 165

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELEIAFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|293365234|ref|ZP_06611951.1| metalloprotease [Streptococcus oralis ATCC 35037]
 gi|307703773|ref|ZP_07640714.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus oralis ATCC 35037]
 gi|315612996|ref|ZP_07887907.1| metalloprotease [Streptococcus sanguinis ATCC 49296]
 gi|291316684|gb|EFE57120.1| metalloprotease [Streptococcus oralis ATCC 35037]
 gi|307622608|gb|EFO01604.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus oralis ATCC 35037]
 gi|315315106|gb|EFU63147.1| metalloprotease [Streptococcus sanguinis ATCC 49296]
          Length = 165

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDIAFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|111221447|ref|YP_712241.1| putative metalloprotease [Frankia alni ACN14a]
 gi|122954432|sp|Q0RP74|RRMF_FRAAA RecName: Full=Probable rRNA maturation factor
 gi|111148979|emb|CAJ60659.1| conserved hypothetical protein [Frankia alni ACN14a]
          Length = 181

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASS-----DGCSSLMLGDIVL 106
           + ELS++  +   +  L+  Y G + PT+VLSF    AF +S     D   + +LGD+VL
Sbjct: 35  LAELSVMLVEEKAMADLHVRYMGEEGPTDVLSFAQDDAFDASWSESVDDDPTTLLGDVVL 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             ++   +A   G   E  L  L  HG LHLLGYDH +  +   M  ++  +L
Sbjct: 95  CPDVARRQAEQAGHSHERELHLLCTHGILHLLGYDHAEPDEEREMWKIQNKLL 147


>gi|227543020|ref|ZP_03973069.1| metalloprotease [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227181242|gb|EEI62214.1| metalloprotease [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 174

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-------CSSLMLGDIVLA 107
           VE+++   D   IE L+  +  ++ PT+V+SFP    SS G            LGDI+L 
Sbjct: 36  VEVTITCVDLDTIEDLHVRWLDLEGPTDVMSFPMDDISSTGGRPDAADPGPAYLGDIILC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            +  + +A+  G    + L  L +HG LHLLGYDH    +   M  L+  IL+
Sbjct: 96  PDFAQKQADKAGHSLNHELDLLTVHGCLHLLGYDHAKPNEEQHMFALQNDILK 148


>gi|239618150|ref|YP_002941472.1| protein of unknown function UPF0054 [Kosmotoga olearia TBF 19.5.1]
 gi|239506981|gb|ACR80468.1| protein of unknown function UPF0054 [Kosmotoga olearia TBF 19.5.1]
          Length = 145

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L+++ T    +   N  YR    PT+VLSF       +       GDIV++ E IE +A 
Sbjct: 38  LNVLLTTDEEMTYYNETYRHKKGPTDVLSFEYGLDDPEAV-----GDIVISLETIEKQAK 92

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVM 151
             G  F+  L  ++IHG LH+LGYDH  D+++A +M
Sbjct: 93  EFGNTFQEELSLMLIHGVLHILGYDHEGDEEEAKIM 128


>gi|172041012|ref|YP_001800726.1| putative metalloprotease [Corynebacterium urealyticum DSM 7109]
 gi|171852316|emb|CAQ05292.1| conserved hypothetical protein [Corynebacterium urealyticum DSM
           7109]
          Length = 200

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 7/112 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDG--CSSLMLGDIVLA 107
            ELS+   D   I  L+  +  +  PT+V+SFP       +   DG   S  MLGDI+L 
Sbjct: 41  AELSIHIVDEETIADLHLRWLNLPGPTDVMSFPMDELTPGWGRKDGPPVSPAMLGDIMLC 100

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
               + +A   G    + L  L +HG LHLLG+DHV  ++   M  ++  +L
Sbjct: 101 PSFAKGQAERAGHSLAHELDLLTVHGVLHLLGFDHVTPEEEQQMFSIQNEVL 152


>gi|220909854|ref|YP_002485165.1| hypothetical protein Cyan7425_4494 [Cyanothece sp. PCC 7425]
 gi|254803919|sp|B8HK54|RRMF_CYAP4 RecName: Full=Probable rRNA maturation factor
 gi|219866465|gb|ACL46804.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 7425]
          Length = 169

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----AFASSDGCSSLMLGDIVLAYEI 110
           EL L  TD   I +LN  YR   +PT+VL+F         +  D    L LGDIV++ + 
Sbjct: 47  ELCLRLTDDGEIASLNSFYRQQPQPTDVLAFAALEVEVPRSPPDQTELLHLGDIVISVDT 106

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
            + ++          L  L  HGFLHLLG+DH D      M   +  +L  +G+ +P
Sbjct: 107 AQRQSLAGQHSLTVELAWLAAHGFLHLLGWDHPDPASLEQMLKQQSILLAAVGLENP 163


>gi|296130045|ref|YP_003637295.1| protein of unknown function UPF0054 [Cellulomonas flavigena DSM
           20109]
 gi|296021860|gb|ADG75096.1| protein of unknown function UPF0054 [Cellulomonas flavigena DSM
           20109]
          Length = 150

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            +L +   D+  +  L+  +     PT+VLSFP    T     D     +LGD+VL  E+
Sbjct: 35  ADLFVRLVDTATMTDLHVRWMDEPGPTDVLSFPMDELTPGREGDPAGPGVLGDVVLCPEV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLGYDHV+  +   M  L+R +L
Sbjct: 95  AATQARAAGHSTAEEMLLLTTHGILHLLGYDHVEPDEEKEMFALQRRLL 143


>gi|206900820|ref|YP_002251042.1| hypothetical protein DICTH_1213 [Dictyoglomus thermophilum H-6-12]
 gi|206739923|gb|ACI18981.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
          Length = 142

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 4/107 (3%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           N  ++S+VF ++ +I  LN +YR  D PT+VLSF             ++G+I ++ +   
Sbjct: 36  NKYDISVVFVNNEKIRELNSKYRKKDVPTDVLSFSLG----KDPKGRIIGEIYISIDTAR 91

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +++    K   + +  L +HG LH+LGYDH  ++D   ME   ++++
Sbjct: 92  VQSEENNKNLIDEVAFLTLHGLLHILGYDHEKEEDYREMEKETKNLI 138


>gi|323126736|gb|ADX24033.1| putative metalloprotease [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 165

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F+  D       + +M    
Sbjct: 37  EMSVTFVTNARSHELNLEYRDTDRPTDVISLEYKPETPILFSQDDLAADPSLAEMMAEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISIDKAREQAEDYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|297559685|ref|YP_003678659.1| hypothetical protein Ndas_0708 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844133|gb|ADH66153.1| protein of unknown function UPF0054 [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 162

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----MLGDIVLAYE 109
           + ELS+V  D   +  L+  +     PT+VLSFP       G        +LGD+++  +
Sbjct: 35  LAELSVVLVDEEPMADLHVRWMDEPGPTDVLSFPMDELRPGGPGRTSEPGVLGDVIICPQ 94

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + E +A   G   E  +  L  HG LHLLGYDH + ++   M GL+  IL
Sbjct: 95  VAERQAEKAGHGTEAEIDLLCTHGILHLLGYDHAEPEEHKEMFGLQGEIL 144


>gi|322374472|ref|ZP_08048986.1| putative metalloprotease [Streptococcus sp. C300]
 gi|321279972|gb|EFX57011.1| putative metalloprotease [Streptococcus sp. C300]
          Length = 165

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDIAFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAKEYGHSFEREMGFLAVHGFLHINGYDHYTPEEETEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|15639637|ref|NP_219087.1| putative metalloprotease [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025875|ref|YP_001933647.1| metalloprotease [Treponema pallidum subsp. pallidum SS14]
 gi|6686126|sp|O83656|RRMF_TREPA RecName: Full=Probable rRNA maturation factor
 gi|238689336|sp|B2S3N9|RRMF_TREPS RecName: Full=Probable rRNA maturation factor
 gi|3322948|gb|AAC65623.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018450|gb|ACD71068.1| hypothetical protein TPASS_0650 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060019|gb|ADD72754.1| putative metalloprotease [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 160

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 14/131 (10%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-- 88
           +C V+ ++A+S+             +LS+V      I  LN++YRGID PT+VLSF    
Sbjct: 27  VCAVLDSQAISHW------------DLSIVCCTDAFIRRLNYDYRGIDSPTDVLSFENDG 74

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            +    G    + GDI+++ E +   +             ++IHG LHL G DH D+   
Sbjct: 75  EYCDDAGTRFFLAGDIIISLESVRENSERFHVAAHEEFKRVLIHGILHLSGMDHQDNSPG 134

Query: 149 CVMEGLERSIL 159
             M  L+  IL
Sbjct: 135 QEMLRLQERIL 145


>gi|313680087|ref|YP_004057826.1| hypothetical protein Ocepr_1196 [Oceanithermus profundus DSM 14977]
 gi|313152802|gb|ADR36653.1| protein of unknown function UPF0054 [Oceanithermus profundus DSM
           14977]
          Length = 141

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++++     RI  L   + G D  T+VLSFPT +   D      LGD+ ++ +  + +A
Sbjct: 37  EVTVILCSDRRIRELKRAHWGEDAATDVLSFPT-YEPGDPFLPPHLGDVWISLDTAQRQA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
              G   E+ ++ L  HG  HLLG+DH  ++       ++R ILE
Sbjct: 96  REQGHALEDEVLTLAAHGLWHLLGHDHTTEEAWRGFRNVQRRILE 140


>gi|331266550|ref|YP_004326180.1| putative metalloprotease [Streptococcus oralis Uo5]
 gi|326683222|emb|CBZ00840.1| putative metalloprotease [Streptococcus oralis Uo5]
          Length = 165

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDIAFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|251781920|ref|YP_002996222.1| putative metalloprotease [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390549|dbj|BAH81008.1| hypothetical protein SDEG_0506 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 182

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F+  D       + +M    
Sbjct: 54  EMSVTFVTNARSHELNLEYRDTDRPTDVISLEYKPETPILFSQDDLAADPSLAEMMAEFD 113

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 114 AYIGELFISIDKAREQAEDYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 173

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 174 LTAYGLT 180


>gi|306836631|ref|ZP_07469597.1| metalloprotease [Corynebacterium accolens ATCC 49726]
 gi|304567461|gb|EFM43060.1| metalloprotease [Corynebacterium accolens ATCC 49726]
          Length = 206

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 11/100 (11%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDG-------CSSLMLGD 103
            E ++   D   IE L+  +  ++ PT+V+SFP    T  A+S G           MLGD
Sbjct: 36  AECTITCVDLKSIEDLHIRWMDLEGPTDVMSFPMDELTPGATSGGGRPDAADPGPSMLGD 95

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           IVL  E    +A+  G    + L  L +HG LHLLGYDH 
Sbjct: 96  IVLCPEFALRQADAAGHSLGHELALLTVHGCLHLLGYDHA 135


>gi|257463002|ref|ZP_05627405.1| metal-binding protein [Fusobacterium sp. D12]
 gi|317060616|ref|ZP_07925101.1| metal-binding protein [Fusobacterium sp. D12]
 gi|313686292|gb|EFS23127.1| metal-binding protein [Fusobacterium sp. D12]
          Length = 164

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIEIEANVL 118
           T +H+I+ +N E+R  D PT+V+SF  A+  ++         LGDIV++ E +  +A   
Sbjct: 57  TGNHQIQVINREFRQKDSPTDVISF--AYHENEDFLVGPYDTLGDIVISLERVGEQAKEY 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
              F     +++ HG LH+LGYDH+D+ D   M   E  IL   G
Sbjct: 115 NHSFTREFYYVLTHGILHILGYDHIDENDKREMREREEEILGHFG 159


>gi|302560725|ref|ZP_07313067.1| metalloprotease [Streptomyces griseoflavus Tu4000]
 gi|302478343|gb|EFL41436.1| metalloprotease [Streptomyces griseoflavus Tu4000]
          Length = 165

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           D     +LGDIVL  
Sbjct: 34  LSELSVIVVDAGAMEQLHIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCP 93

Query: 109 EII--EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+   + E        +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAARQGEEAPTRHTMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|261885819|ref|ZP_06009858.1| putative metalloprotease [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 134

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+ LVF  +  +  +N + RG+DK T+VLSFP  +          +G IV+  ++   +
Sbjct: 22  AEVELVFVSNEEMREINRDKRGMDKTTDVLSFPLTYVPH-----FPIGSIVINTDLASSK 76

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           A  LG   ++ +  L  HG LH+LG+DH +D     M   E S++E +G+
Sbjct: 77  ALELGHSTDDEIALLFTHGLLHILGFDHENDDGE--MRRKEISMMEHMGL 124


>gi|195941799|ref|ZP_03087181.1| putative metalloprotease [Borrelia burgdorferi 80a]
 gi|216264854|ref|ZP_03436846.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|221217391|ref|ZP_03588862.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|224533033|ref|ZP_03673639.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|224533910|ref|ZP_03674495.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225549226|ref|ZP_03770199.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|225549724|ref|ZP_03770689.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|215981327|gb|EEC22134.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|221192669|gb|EEE18885.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|224512027|gb|EEF82422.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|224512913|gb|EEF83279.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225369684|gb|EEG99132.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|225370084|gb|EEG99524.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|312148321|gb|ADQ30980.1| conserved hypothetical protein [Borrelia burgdorferi JD1]
          Length = 155

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLSVFYD--FVVSVLNALSISDF------ELSVILCDNAYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+V+++E ++  A     E
Sbjct: 50  QELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINYKIQGDLVISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILED 161
               L  + IHG LHL+GY H  +D     M  L+ +IL++
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFQKESMLILQENILKE 150


>gi|317178539|dbj|BAJ56327.1| putative metalloprotease [Helicobacter pylori F30]
          Length = 142

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV   + R   +N ++RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDKTMR--EINRDFRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHRLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|297194455|ref|ZP_06911853.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718735|gb|EDY62643.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 165

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDAEAMEQLHIQWMDLPGPTDVMSFPMDELRPPSKDDEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+ + +      +   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAKKQGEEAPTQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|332670852|ref|YP_004453860.1| hypothetical protein Celf_2346 [Cellulomonas fimi ATCC 484]
 gi|332339890|gb|AEE46473.1| protein of unknown function UPF0054 [Cellulomonas fimi ATCC 484]
          Length = 150

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            ELS++   +  +  L+ ++     PT+VLSFP          +   + +LGD+VL  E+
Sbjct: 35  TELSIMLVGTDVMTDLHVKWMDEPGPTDVLSFPMDELRPGREGEPTPAGLLGDVVLCPEV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      L+ L  HG LHLLGYDHV+ ++   M  L+R +L
Sbjct: 95  AAQQARAAGHSTAEELLLLTTHGILHLLGYDHVEPEEEKEMFALQRRLL 143


>gi|306825400|ref|ZP_07458740.1| probable metalloprotease [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432338|gb|EFM35314.1| probable metalloprotease [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 165

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDIAFDEEDLLENPEFAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|284106930|ref|ZP_06386310.1| metalloprotease [Candidatus Poribacteria sp. WGA-A3]
 gi|283830003|gb|EFC34280.1| metalloprotease [Candidatus Poribacteria sp. WGA-A3]
          Length = 151

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           R+  LN  YR  D+ T+VL+F  A+  +   +S +LGD+V++      +A       +  
Sbjct: 46  RMRRLNRTYRNQDRTTDVLAF--AYREAQTGASPLLGDVVISVPAARRQAKARSHSLDEE 103

Query: 126 LVHLIIHGFLHLLGYDH 142
           ++ L+IHG LHL+GYDH
Sbjct: 104 VLRLLIHGVLHLVGYDH 120


>gi|320010900|gb|ADW05750.1| protein of unknown function UPF0054 [Streptomyces flavogriseus ATCC
           33331]
          Length = 165

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 15/118 (12%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDTAAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKEFENH------LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+    A   G++ E        L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EV----AKKQGEDAETQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAAMFGLQAAIVD 147


>gi|38234288|ref|NP_940055.1| putative metalloprotease [Corynebacterium diphtheriae NCTC 13129]
 gi|59799118|sp|Q6NG17|RRMF_CORDI RecName: Full=Probable rRNA maturation factor
 gi|38200551|emb|CAE50246.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
          Length = 196

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVLA 107
            E ++   D   +  L+  +  ++ PT+V+SFP            +      MLGDI+L 
Sbjct: 36  AEATISVVDVATMSDLHVRWMDLEGPTDVMSFPMDELTPGMGRPDAQPFGPAMLGDIILC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            E    +A   G +  + L  L  HG LHLLGYDH++ +D   M  L+  +L+D
Sbjct: 96  PEFAAKQAAKAGHDMGHELALLTTHGCLHLLGYDHIEPEDEQEMFALQNELLQD 149


>gi|58584858|ref|YP_198431.1| metal-dependent hydrolase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58419174|gb|AAW71189.1| Predicted metal-dependent hydrolase [Wolbachia endosymbiont strain
           TRS of Brugia malayi]
          Length = 171

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 4/109 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+   D + +  LN  +R ++KPTNVLSFP    SS+ C    LGDI ++ + +  E++
Sbjct: 63  ISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSE-CD---LGDIAISIDTVRKESD 118

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                   H+ H+++HG LHLLGYDH    +  VM+ LE  IL  LG N
Sbjct: 119 EYHIPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKILASLGYN 167


>gi|251772247|gb|EES52817.1| conserved protein of unknown function [Leptospirillum
           ferrodiazotrophum]
          Length = 180

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 2/110 (1%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           V ++  +LSLV  +  R+  LN  YRG    T+VLSF     S        LG+IV++  
Sbjct: 30  VGQDHCDLSLVLVNDKRMRELNRTYRGKPSTTDVLSFEGPPGSPPRMPRF-LGEIVISVP 88

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSI 158
               +A   G   E+ L +L+IHG  HLLG+DH   ++D  +M+  E  I
Sbjct: 89  RAHRQAMTAGLSPEDELSNLLIHGVCHLLGFDHERGEEDQRIMKAEEEKI 138


>gi|239941042|ref|ZP_04692979.1| putative metalloprotease [Streptomyces roseosporus NRRL 15998]
 gi|239987521|ref|ZP_04708185.1| putative metalloprotease [Streptomyces roseosporus NRRL 11379]
 gi|291444482|ref|ZP_06583872.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291347429|gb|EFE74333.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 165

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDTDAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+ + +      +   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAKKQGEEAPTQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|15645774|ref|NP_207951.1| putative metalloprotease [Helicobacter pylori 26695]
 gi|6647979|sp|O25775|RRMF_HELPY RecName: Full=Probable rRNA maturation factor
 gi|2314318|gb|AAD08206.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 140

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++  I  +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDET--IREINKDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   EN +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHSLENEIALLFIHGVLHLLGYDHEKDK 114


>gi|194476814|ref|YP_002048993.1| hypothetical protein PCC_0342 [Paulinella chromatophora]
 gi|171191821|gb|ACB42783.1| hypothetical protein PCC_0342 [Paulinella chromatophora]
          Length = 186

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 7   NLPRLDLQIAVE-----NALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLV 60
           + P LDL   +E       +W D      L   +F   +S+L S+     +  I  L L 
Sbjct: 4   SFPDLDLAFRIECKELSTGIWTDPNKGYKLWHELFRVWLSDLSSELPTIFQAEIYTLGLR 63

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFA--------SSDGCSSLM-LGDIVLAYEII 111
             +  +I+ +N ++R  DKPT+VLSF    A        S+   + L+ LGDI+++ E  
Sbjct: 64  LINDTQIQKINRDWRQNDKPTDVLSFAANSAEVFHSMSESNIQLNKLVELGDIIISLESA 123

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             +A  L    E  L  L  HG LHLLG+DH ++
Sbjct: 124 ARQARELNHSLEEELHWLASHGLLHLLGWDHPNE 157


>gi|270292909|ref|ZP_06199120.1| putative metalloprotease [Streptococcus sp. M143]
 gi|270278888|gb|EFA24734.1| putative metalloprotease [Streptococcus sp. M143]
          Length = 165

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDIAFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAYEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|15827258|ref|NP_301521.1| metalloprotease [Mycobacterium leprae TN]
 gi|221229736|ref|YP_002503152.1| putative metalloprotease [Mycobacterium leprae Br4923]
 gi|2851628|sp|Q49752|RRMF_MYCLE RecName: Full=Probable rRNA maturation factor
 gi|254806550|sp|B8ZUT0|RRMF_MYCLB RecName: Full=Probable rRNA maturation factor
 gi|13092807|emb|CAC30136.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219932843|emb|CAR70721.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
          Length = 178

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 10/115 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVL 106
            ELS+V  D+  +  L+  +  +  PT+V+SFP           A+  G S  MLGDIVL
Sbjct: 35  AELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDEFEPGGRPDAAEPGPS--MLGDIVL 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
             E    +A   G    + L  L IHG LHLLGYDH +  +   M  L+  +LE+
Sbjct: 93  CPEFAAQQAAAEGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQGRLLEE 147


>gi|87123560|ref|ZP_01079411.1| hypothetical protein RS9917_06855 [Synechococcus sp. RS9917]
 gi|86169280|gb|EAQ70536.1| hypothetical protein RS9917_06855 [Synechococcus sp. RS9917]
          Length = 196

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-- 95
           +A + L   G       + L L F D   I  LN  +R   K T+VLSF  A    DG  
Sbjct: 49  RADTELTCPGPVRTAQAISLGLQFCDDATIAALNGTWRQKPKATDVLSF--AALDGDGPM 106

Query: 96  --CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                + LGDI+++ +    +A   G    + L  L+ HG LHLLG+DH D+     M
Sbjct: 107 PDAPCVELGDIIVSVDTAGRQAMEQGHGLVHELRWLVSHGLLHLLGWDHPDEAQLTAM 164


>gi|182438796|ref|YP_001826515.1| putative metalloprotease [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326779451|ref|ZP_08238716.1| metalloprotease ybeY [Streptomyces cf. griseus XylebKG-1]
 gi|238689002|sp|B1VY47|RRMF_STRGG RecName: Full=Probable rRNA maturation factor
 gi|178467312|dbj|BAG21832.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326659784|gb|EGE44630.1| metalloprotease ybeY [Streptomyces cf. griseus XylebKG-1]
          Length = 165

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDTDAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+ + +      +   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAKKQGEEAPTQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|317486292|ref|ZP_07945124.1| hypothetical protein HMPREF0179_02482 [Bilophila wadsworthia 3_1_6]
 gi|316922462|gb|EFV43716.1| hypothetical protein HMPREF0179_02482 [Bilophila wadsworthia 3_1_6]
          Length = 169

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 6/121 (4%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-- 87
             C     +A+S ++           EL LV      +   N  Y G   PTNVLSFP  
Sbjct: 35  PFCRAELHRALSAMLRA---AGSGPAELDLVLVRDAGMADYNLRYMGCHGPTNVLSFPID 91

Query: 88  -TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                  D    + LG +V + + +  E  + G++ E H + L+ HG  HL+GYDH  + 
Sbjct: 92  EQIAGPEDEDVPVQLGSLVFSVDTLHRETLLYGQDPEEHCLRLLAHGLGHLVGYDHGPEM 151

Query: 147 D 147
           D
Sbjct: 152 D 152


>gi|1303823|dbj|BAA12479.1| YqfG [Bacillus subtilis]
          Length = 157

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 6/120 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIV 105
           ++  E+S+    +  I  +N EYRG D PT+V+SF            +      +LG+I+
Sbjct: 36  QDQAEVSVTIVSNDDIHQINKEYRGKDAPTDVISFALEEEGEGEIEIVGAEMPPVLGNII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +    +A      F+  L  L +HGFLHLLGYDH+  ++   M   ++ +L+  G+ 
Sbjct: 96  ISADRTREQAEEYNHSFKRELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLK 155


>gi|239979364|ref|ZP_04701888.1| putative metalloprotease [Streptomyces albus J1074]
 gi|291451239|ref|ZP_06590629.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291354188|gb|EFE81090.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 165

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D   +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVVDPEAMEQLHIQWMDLPGPTDVMSFPMDELRPPVKDEEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           ++   +      +   +  L  L +HG LHLLGYDH +  +   M GL+++I++
Sbjct: 94  DVARQQGQDAPTQHSMDEELQLLTVHGVLHLLGYDHEEPGEKAEMFGLQQAIVD 147


>gi|308535206|ref|YP_002137815.2| hypothetical protein Gbem_0998 [Geobacter bemidjiensis Bem]
 gi|308052551|gb|ACH38019.2| protein of unknown function UPF0054 [Geobacter bemidjiensis Bem]
          Length = 155

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS+       I  +N +Y G DK TNV+SF          +  +LGD+V++ +    E
Sbjct: 40  AELSISIVGDRAIRVINRDYLGRDKATNVISFAMQEGEFGAVNPELLGDVVISVDTAARE 99

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSIL 159
           A   G+ F + L  L++HG LH+ GYDH    + +A  ME  ER I 
Sbjct: 100 AEEAGETFLSRLYFLLMHGILHITGYDHERSGEAEAARMEAKEREIF 146


>gi|330893093|gb|EGH25754.1| metal-binding heat shock protein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 114

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA E +   DE   R  CE+            G   +    EL++   D +    L
Sbjct: 4   LDLQIASETSA-PDEARFRLWCEM------------GLRQRSADSELTIRLVDENEGREL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H++
Sbjct: 51  NHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHMV 109

Query: 131 IHGFL 135
           IHG L
Sbjct: 110 IHGCL 114


>gi|148272750|ref|YP_001222311.1| putative metalloprotease [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166231413|sp|A5CRB1|RRMF_CLAM3 RecName: Full=Probable rRNA maturation factor
 gi|147830680|emb|CAN01620.1| putative metal-dependent hydrolase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 153

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            EL++V  D   +E L+ ++     PT+VLSFP              + +LGDIV+  ++
Sbjct: 35  AELAIVMVDEGAMEQLHVQWMDEPGPTDVLSFPMDELRPGTEDRPTPAGLLGDIVVCPQV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLG+DH +  +   M GL+R IL
Sbjct: 95  AAEQAVTAGHSTMEEILLLTAHGILHLLGFDHAEPDEEREMFGLQRDIL 143


>gi|46198991|ref|YP_004658.1| metal-binding protein [Thermus thermophilus HB27]
 gi|55981014|ref|YP_144311.1| hypothetical protein TTHA1045 [Thermus thermophilus HB8]
 gi|62901332|sp|Q72JT5|RRMF_THET2 RecName: Full=Probable rRNA maturation factor
 gi|62901421|sp|Q5SJG3|RRMF_THET8 RecName: Full=Probable rRNA maturation factor
 gi|46196615|gb|AAS81031.1| hypothetical conserved metal-binding protein [Thermus thermophilus
           HB27]
 gi|55772427|dbj|BAD70868.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 139

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++++ T   R+  L  E+ G D+ T+VLSFP  +   D      LGDI ++ +    +A 
Sbjct: 36  VTVILTGDRRLRALKREWWGEDEATDVLSFPH-YEPGDPFVPPHLGDIWISLDTARRQAE 94

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             G   E  ++ L  HG  HLLG+DH  ++D    EG  R
Sbjct: 95  ARGASLEEEVLVLAAHGLWHLLGHDHQKEED---WEGFRR 131


>gi|15594406|ref|NP_212194.1| putative metalloprotease [Borrelia burgdorferi B31]
 gi|218249454|ref|YP_002374591.1| hypothetical protein BbuZS7_0061 [Borrelia burgdorferi ZS7]
 gi|223889176|ref|ZP_03623765.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|226320768|ref|ZP_03796324.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
 gi|226322028|ref|ZP_03797553.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|6686087|sp|O51087|RRMF_BORBU RecName: Full=Probable rRNA maturation factor
 gi|226734032|sp|B7J0Z6|RRMF_BORBZ RecName: Full=Probable rRNA maturation factor
 gi|2687941|gb|AAC66448.1| conserved hypothetical protein [Borrelia burgdorferi B31]
 gi|218164642|gb|ACK74703.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
 gi|223885425|gb|EEF56526.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|226232618|gb|EEH31372.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|226233823|gb|EEH32548.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
          Length = 155

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLNVFYD--FVVSVLNALSISDF------ELSVILCDNAYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+V+++E ++  A     E
Sbjct: 50  QELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINYKIQGDLVISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILED 161
               L  + IHG LHL+GY H  +D     M  L+ +IL++
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFQKEGMLILQENILKE 150


>gi|170782109|ref|YP_001710442.1| putative metalloprotease [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189038996|sp|B0RCR5|RRMF_CLAMS RecName: Full=Probable rRNA maturation factor
 gi|169156678|emb|CAQ01836.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 153

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            EL++V  D   +E L+ ++     PT+VLSFP              + +LGDIV+  ++
Sbjct: 35  AELAIVMVDEGAMEQLHVQWMDEPGPTDVLSFPMDELRPGTEDRPTPAGLLGDIVVCPQV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLG+DH +  +   M GL+R IL
Sbjct: 95  AAEQAVTAGHSTMEEILLLTAHGILHLLGFDHAEPDEEREMFGLQRDIL 143


>gi|227495952|ref|ZP_03926263.1| metalloprotease [Actinomyces urogenitalis DSM 15434]
 gi|226834506|gb|EEH66889.1| metalloprotease [Actinomyces urogenitalis DSM 15434]
          Length = 152

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            EL+++F D   +  L+  +  +  PT+V+SFP              +  LGDIVL  ++
Sbjct: 35  AELNILFIDPEPMAELHVRWLDLPGPTDVMSFPMDELRPGTEDSETPAGTLGDIVLCPQV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLGYDH ++++   M  L+R +L
Sbjct: 95  AAKQALEAGHSAPEEMLLLTTHGILHLLGYDHAEEEEKKEMFALQRQLL 143


>gi|283955287|ref|ZP_06372787.1| hypothetical protein C414_000440025 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793201|gb|EFC31970.1| hypothetical protein C414_000440025 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 136

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 6/105 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+F D+  ++ +N E R  DK T+VLSFP           L LG +V+  ++ + +A
Sbjct: 22  DVELIFVDNKEMQEINLEQRKQDKTTDVLSFPLENIDE----KLPLGSVVINVDLAKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
             LG  +E  +  L IH  LHLLG+DH  + D   M   E+ ++E
Sbjct: 78  KELGHSYEEEVSLLFIHAMLHLLGFDH--EVDNGEMREKEKELIE 120


>gi|148263839|ref|YP_001230545.1| hypothetical protein Gura_1782 [Geobacter uraniireducens Rf4]
 gi|146397339|gb|ABQ25972.1| protein of unknown function UPF0054 [Geobacter uraniireducens Rf4]
          Length = 129

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELSL       I  LN +Y   DKPTNV+SF          +  +LGD++++ +    EA
Sbjct: 15  ELSLTIVGDRSIRRLNRDYLERDKPTNVISFAMQEGLFGELNPEVLGDVIISADTAAREA 74

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSIL 159
              G  F   L  L++HG LH+ GYDH    + +A  ME   R I 
Sbjct: 75  EEGGMPFFARLSFLLLHGILHITGYDHERSGESEARRMEAKAREIF 120


>gi|111114881|ref|YP_709499.1| putative metalloprotease [Borrelia afzelii PKo]
 gi|123341437|sp|Q0SPA5|RRMF_BORAP RecName: Full=Probable rRNA maturation factor
 gi|110890155|gb|ABH01323.1| conserved hypothetical protein [Borrelia afzelii PKo]
          Length = 152

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 14/138 (10%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLSIFYD--FILSVLNTLSISDF------ELSVILCDNVYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + LN ++R  ++PT+VLSF     + D   G +  + GD+++++E ++  A     E   
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNEVNEDLVDGINYKIQGDLIISFEYLKFSAQEFNVEIYE 109

Query: 125 HLVHLIIHGFLHLLGYDH 142
            L  + IHG LHL+GY H
Sbjct: 110 ELQRVTIHGILHLMGYKH 127


>gi|326432698|gb|EGD78268.1| hypothetical protein PTSG_09333 [Salpingoeca sp. ATCC 50818]
          Length = 180

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 8/112 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-------LGDIVLAY 108
           ++++ F  + R+  +N +YRG+   T+VLSFP    ++ G    +       LGDI L+ 
Sbjct: 42  DMAVTFVSAERMREINQQYRGVGASTDVLSFPFHEVTTPGTLPPVEFEDEKDLGDIFLSL 101

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           + I+ +        ++ L  +  HG  HLLGYDH    +A  M   ER ILE
Sbjct: 102 DTIQAQ-QTSHLTLQDELKVVATHGLCHLLGYDHDTQANATKMAEKEREILE 152


>gi|33864330|ref|NP_895890.1| hypothetical protein PMT2065 [Prochlorococcus marinus str. MIT
           9313]
 gi|46577390|sp|Q7V498|RRMF_PROMM RecName: Full=Probable rRNA maturation factor
 gi|33641110|emb|CAE22239.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 187

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS----SDGCSSLMLGDIVLAYE 109
           ++ L L  TD   I  LN  +R   + T+VLSFP    S    +D C  + LGDIV++ +
Sbjct: 71  MLSLGLQLTDDATITELNHSWRQRSESTDVLSFPALDNSLVLPTDTC--VELGDIVVSVQ 128

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             + +A     E    L  L+ HG LHLLG+DH  D+    M   +  +L
Sbjct: 129 TAQRQAKQHSHELGLELRWLVSHGLLHLLGWDHPTDQSLKTMLSYQEQLL 178


>gi|261838486|gb|ACX98252.1| hypothetical protein KHP_1056 [Helicobacter pylori 51]
          Length = 142

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV   + R   +N + RG D  T+VLSFP      +  S   LG +V+   + +
Sbjct: 28  QIIELVLVSDGTMR--EINRDLRGCDYATDVLSFPL-----EAISHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHRLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|228478259|ref|ZP_04062867.1| conserved hypothetical protein [Streptococcus salivarius SK126]
 gi|228249938|gb|EEK09208.1| conserved hypothetical protein [Streptococcus salivarius SK126]
          Length = 165

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----------TAFASSDGCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S                A +   + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDISFDEEELAENPELAEMMGEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  SYIGELFISVDKAHEQAEDYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|329116194|ref|ZP_08244911.1| translation metalloprotein YbeY [Streptococcus parauberis NCFD
           2020]
 gi|326906599|gb|EGE53513.1| translation metalloprotein YbeY [Streptococcus parauberis NCFD
           2020]
          Length = 176

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F   D       + +M    
Sbjct: 48  EMSVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEIPILFDQGDMEADPDLAEMMAEFD 107

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +  + +A   G  FE  +  L +HGFLH+ GYDH    +   M  L+  I
Sbjct: 108 AYIGELFISIDKAKEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPAEEKEMFTLQEEI 167

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 168 LTAYGLT 174


>gi|317180891|dbj|BAJ58677.1| putative metalloprotease [Helicobacter pylori F32]
          Length = 140

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N ++RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDFRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  ENALKLGHRLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|324993801|gb|EGC25720.1| metalloprotease [Streptococcus sanguinis SK405]
 gi|324994880|gb|EGC26793.1| metalloprotease [Streptococcus sanguinis SK678]
 gi|327463075|gb|EGF09396.1| metalloprotease [Streptococcus sanguinis SK1]
 gi|327490234|gb|EGF22022.1| metalloprotease [Streptococcus sanguinis SK1058]
          Length = 165

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL------------- 99
           E+++ F  + R   LN EYR  D+PT+V+S    P    S D    L             
Sbjct: 37  EMAVTFVSNERSHELNLEYRDTDRPTDVISLEYKPELDVSVDEEDLLDHPELAEMLEDFD 96

Query: 100 -MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|296876079|ref|ZP_06900133.1| probable metalloprotease [Streptococcus parasanguinis ATCC 15912]
 gi|296432790|gb|EFH18583.1| probable metalloprotease [Streptococcus parasanguinis ATCC 15912]
          Length = 165

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-----------FASSDGCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S                A +   + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEMEISFDEEDLAENPELAEMMAEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  TYIGELFISIDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|312868384|ref|ZP_07728584.1| translation metalloprotein YbeY [Streptococcus parasanguinis F0405]
 gi|311096129|gb|EFQ54373.1| translation metalloprotein YbeY [Streptococcus parasanguinis F0405]
          Length = 165

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-----------FASSDGCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S                A +   + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEMEISFDEEDLAENPELAEMMAEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  TYIGELFISIDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|104162024|emb|CAJ75732.1| predicted metal-dependent hydrolaseinG [uncultured Thermotogales
           bacterium]
          Length = 121

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 6/90 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           +I  L+++ TD   IE +N E+R  ++PT+VLSF        G     +GDIV++ + I 
Sbjct: 13  DIGTLNILLTDDSEIERINKEFRHKNEPTDVLSFQY------GLEEETIGDIVISLDRIS 66

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
            +A      FE  L +++IHG LH++GY H
Sbjct: 67  EQAAEFDNSFEEELYYILIHGVLHVIGYTH 96


>gi|71903040|ref|YP_279843.1| putative metalloprotease [Streptococcus pyogenes MGAS6180]
 gi|71802135|gb|AAX71488.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS6180]
          Length = 182

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F+  D       + +M    
Sbjct: 54  EMSVTFVTNERSHELNLEYRDTDRPTDVISLEYKPETPILFSQEDFAADPSLAEMMAEFD 113

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 114 AYIGELFISIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEI 173

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 174 LTAYGLT 180


>gi|307330993|ref|ZP_07610124.1| protein of unknown function UPF0054 [Streptomyces violaceusniger Tu
           4113]
 gi|306883379|gb|EFN14434.1| protein of unknown function UPF0054 [Streptomyces violaceusniger Tu
           4113]
          Length = 165

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 7/112 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYEI 110
           ELS++  D+  +E L+ ++  +  PT+V+SFP           +     +LGDIVL  E+
Sbjct: 36  ELSVIVVDADAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEV 95

Query: 111 IEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            + +      E   +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 96  AKKQGEEAPTEHSMDEELHLLTVHGVLHLLGYDHEEADERAEMFGLQAAIVD 147


>gi|15674590|ref|NP_268764.1| putative metalloprotease [Streptococcus pyogenes M1 GAS]
 gi|19745597|ref|NP_606733.1| metalloprotease [Streptococcus pyogenes MGAS8232]
 gi|28896434|ref|NP_802784.1| metalloprotease [Streptococcus pyogenes SSI-1]
 gi|56808802|ref|ZP_00366516.1| COG0319: Predicted metal-dependent hydrolase [Streptococcus
           pyogenes M49 591]
 gi|139474289|ref|YP_001129005.1| metalloprotease [Streptococcus pyogenes str. Manfredo]
 gi|209558957|ref|YP_002285429.1| putative metalloprotease [Streptococcus pyogenes NZ131]
 gi|306827876|ref|ZP_07461144.1| probable metalloprotease [Streptococcus pyogenes ATCC 10782]
 gi|54039916|sp|P67141|RRMF_STRP3 RecName: Full=Probable rRNA maturation factor
 gi|54039950|sp|P67142|RRMF_STRP8 RecName: Full=Probable rRNA maturation factor
 gi|54042635|sp|P67140|RRMF_STRP1 RecName: Full=Probable rRNA maturation factor
 gi|73920979|sp|Q5XDG5|RRMF_STRP6 RecName: Full=Probable rRNA maturation factor
 gi|145558819|sp|Q1J824|RRMF_STRPF RecName: Full=Probable rRNA maturation factor
 gi|145558820|sp|Q1JN23|RRMF_STRPC RecName: Full=Probable rRNA maturation factor
 gi|145558822|sp|Q1JI69|RRMF_STRPD RecName: Full=Probable rRNA maturation factor
 gi|145558825|sp|Q1JD48|RRMF_STRPB RecName: Full=Probable rRNA maturation factor
 gi|166231383|sp|A2RG22|RRMF_STRPG RecName: Full=Probable rRNA maturation factor
 gi|226701662|sp|B5XK72|RRMF_STRPZ RecName: Full=Probable rRNA maturation factor
 gi|13621700|gb|AAK33485.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|19747723|gb|AAL97232.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
 gi|28811685|dbj|BAC64617.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
 gi|134272536|emb|CAM30801.1| conserved hypothetical protein [Streptococcus pyogenes str.
           Manfredo]
 gi|209540158|gb|ACI60734.1| hypothetical protein Spy49_0401 [Streptococcus pyogenes NZ131]
 gi|304429924|gb|EFM32965.1| probable metalloprotease [Streptococcus pyogenes ATCC 10782]
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F+  D       + +M    
Sbjct: 37  EMSVTFVTNERSHELNLEYRDTDRPTDVISLEYKPETPILFSQEDLAADPSLAEMMAEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|329934652|ref|ZP_08284693.1| metal-dependent hydrolase [Streptomyces griseoaurantiacus M045]
 gi|329305474|gb|EGG49330.1| metal-dependent hydrolase [Streptomyces griseoaurantiacus M045]
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D+  +E L+ ++  +  PT+V+SFP           D     +LGDIVL  
Sbjct: 34  LSELSVIVVDADAMEQLHRQWMDLPGPTDVMSFPMDELRPPGKDDDEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E+   +          +  L  L +HG LHLLGYDH +  +   M GL+ +I++
Sbjct: 94  EVAAKQGAEAATRHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVD 147


>gi|124024428|ref|YP_001018735.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9303]
 gi|123964714|gb|ABM79470.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9303]
          Length = 187

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS----SDGCSSLMLGDIVLAYE 109
           ++ L L  TD   I  LN  +R   + T+VLSFP    S    +D C  + LGDIV++ +
Sbjct: 71  MLSLGLQLTDDATITELNHAWRQRSETTDVLSFPALDNSLVLPTDTC--VELGDIVVSVQ 128

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             + +A     E    L  L+ HG LHLLG+DH  D+    M   +  +L
Sbjct: 129 TAQRQAKQHSHELGLELRWLVSHGLLHLLGWDHPTDQSLKTMLSYQEQLL 178


>gi|21909871|ref|NP_664139.1| putative metalloprotease [Streptococcus pyogenes MGAS315]
 gi|21904058|gb|AAM78942.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 175

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F+  D       + +M    
Sbjct: 47  EMSVTFVTNERSHELNLEYRDTDRPTDVISLEYKPETPILFSQEDLAADPSLAEMMAEFD 106

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 107 AYIGELFISIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEI 166

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 167 LTAYGLT 173


>gi|50913759|ref|YP_059731.1| putative metalloprotease [Streptococcus pyogenes MGAS10394]
 gi|71910201|ref|YP_281751.1| metalloprotease [Streptococcus pyogenes MGAS5005]
 gi|94988019|ref|YP_596120.1| putative metalloprotease [Streptococcus pyogenes MGAS9429]
 gi|94989898|ref|YP_597998.1| putative metalloprotease [Streptococcus pyogenes MGAS10270]
 gi|94991905|ref|YP_600004.1| putative metalloprotease [Streptococcus pyogenes MGAS2096]
 gi|94993783|ref|YP_601881.1| metalloprotease [Streptococcus pyogenes MGAS10750]
 gi|50902833|gb|AAT86548.1| Hypothetical Metal-Binding Protein [Streptococcus pyogenes
           MGAS10394]
 gi|71852983|gb|AAZ51006.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS5005]
 gi|94541527|gb|ABF31576.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS9429]
 gi|94543406|gb|ABF33454.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS10270]
 gi|94545413|gb|ABF35460.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS2096]
 gi|94547291|gb|ABF37337.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS10750]
          Length = 182

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F+  D       + +M    
Sbjct: 54  EMSVTFVTNERSHELNLEYRDTDRPTDVISLEYKPETPILFSQEDLAADPSLAEMMAEFD 113

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 114 AYIGELFISIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEI 173

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 174 LTAYGLT 180


>gi|322376462|ref|ZP_08050955.1| putative metalloprotease [Streptococcus sp. M334]
 gi|321282269|gb|EFX59276.1| putative metalloprotease [Streptococcus sp. M334]
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         +F   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELEISFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|317182412|dbj|BAJ60196.1| putative metalloprotease [Helicobacter pylori F57]
          Length = 143

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 31  QIIELVLVSDETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 83

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 84  TNALKLGHRLEDEIALLFIHGVLHLLGYDHEKDK 117


>gi|169628759|ref|YP_001702408.1| putative metalloprotease [Mycobacterium abscessus ATCC 19977]
 gi|238688929|sp|B1MN42|RRMF_MYCA9 RecName: Full=Probable rRNA maturation factor
 gi|169240726|emb|CAM61754.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 170

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVL 106
            ELS++  D   +  L+  +  +  PT+V+SFP           A   G S  MLGDIVL
Sbjct: 35  AELSMMLVDLAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPS--MLGDIVL 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
             +    +A   G    + L  L +HG LHLLGYDH + ++   M  L+  +L+D
Sbjct: 93  CPQFAAEQAEAAGHSLAHELALLTVHGVLHLLGYDHAEPEEEREMFALQNQLLQD 147


>gi|145558817|sp|Q48UW8|RRMF_STRPM RecName: Full=Probable rRNA maturation factor
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------PTAFASSD-----GCSSLM---- 100
           E+S+ F  + R   LN EYR  D+PT+V+S       P  F+  D       + +M    
Sbjct: 37  EMSVTFVTNERSHELNLEYRDTDRPTDVISLEYKPETPILFSQEDFAADPSLAEMMAEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|312864823|ref|ZP_07725054.1| translation metalloprotein YbeY [Streptococcus downei F0415]
 gi|311099950|gb|EFQ58163.1| translation metalloprotein YbeY [Streptococcus downei F0415]
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTA---FASSD-----GCSSL 99
           KEN  E+++ F D+ +I  +N +YR +D+PT+V+S    P     F+  D       +++
Sbjct: 33  KEN-KEMAITFVDNEKIHQINLDYRDMDRPTDVVSLEYKPETDIVFSEEDLETDPDLAAV 91

Query: 100 M------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           M      +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  
Sbjct: 92  MEDYDAYIGELFISVDKAHEQAESYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFT 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|171780164|ref|ZP_02921068.1| hypothetical protein STRINF_01952 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281512|gb|EDT46947.1| hypothetical protein STRINF_01952 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 26/165 (15%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E     +EI  +TL  + FA   +         KEN  E+++ F  + R   LN EYR  
Sbjct: 8   ETGQVSEEIKNQTLDLLQFAAEKTG--------KEN-KEMAVTFVTNERSHELNLEYRDT 58

Query: 78  DKPTNVLSF---PTA---FASSDGCSSLML-----------GDIVLAYEIIEIEANVLGK 120
           D+PT+V+S    P +   F+  D   +  L           G++ ++ +    +A   G 
Sbjct: 59  DRPTDVISLEYKPESDLTFSEEDLAENPELAEMLDEFDAYIGELFISVDKAREQAKEYGH 118

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            FE  +  L++HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 119 SFEREMGFLVVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLK 163


>gi|327398193|ref|YP_004339062.1| metalloprotease ybeY [Hippea maritima DSM 10411]
 gi|327180822|gb|AEA33003.1| metalloprotease ybeY [Hippea maritima DSM 10411]
          Length = 144

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 17/119 (14%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+  + +  E +F K+  N          +  EL++V  D   I  LN +++    PTNV
Sbjct: 15  DQTTIESFVEFLFKKSGEN----------SEKELNIVLVDDDEITKLNEQFKNRKGPTNV 64

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           LSF        G    +LGDI ++ + IE EA    +  + +L+ +I HGFLHL+GY H
Sbjct: 65  LSFY-------GYDGDILGDIAISSDTIEREALEKKENAKEYLLFIIAHGFLHLVGYTH 116


>gi|269926173|ref|YP_003322796.1| protein of unknown function UPF0054 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789833|gb|ACZ41974.1| protein of unknown function UPF0054 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 131

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S++ TD  +I  L+ E+ GI+ PT+V+S+P++    +      LGDI ++ E  E +A 
Sbjct: 14  VSILLTDDDQIAKLHLEHMGIEGPTDVMSWPSSDFERENFH--FLGDIAVSCETAEAQAR 71

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYD 141
             G   E  +  L +HG LHLLG+D
Sbjct: 72  DQGHPVETEVSVLAVHGLLHLLGWD 96


>gi|254458014|ref|ZP_05071441.1| conserved hypothetical protein TIGR00043 [Campylobacterales
           bacterium GD 1]
 gi|207085407|gb|EDZ62692.1| conserved hypothetical protein TIGR00043 [Campylobacterales
           bacterium GD 1]
          Length = 139

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ L+ T    I+ +N E+R ID PT+VLSFP             LG IV++   +E  +
Sbjct: 28  EIELIITSKDEIKEINKEHRNIDAPTDVLSFPYVEMPMSP-----LGSIVISSAHVEELS 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
             LG   ++ L  L IHG LHLLG+DH
Sbjct: 83  RELGHTQDDELALLFIHGLLHLLGFDH 109


>gi|254382694|ref|ZP_04998051.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194341596|gb|EDX22562.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 11/123 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYEI 110
           ELS++  D   +E L+ ++  +  PT+V+SFP           +     +LGDIVL  E+
Sbjct: 36  ELSVIVVDEGAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEV 95

Query: 111 IEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE----DLGI 164
            + +      +   +  L  L +HG LHLLGYDH +  +   M GL+ +I++    + GI
Sbjct: 96  AKKQGEDAPTQHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRGERGI 155

Query: 165 NDP 167
             P
Sbjct: 156 TGP 158


>gi|55820696|ref|YP_139138.1| putative metalloprotease [Streptococcus thermophilus LMG 18311]
 gi|55822587|ref|YP_141028.1| putative metalloprotease [Streptococcus thermophilus CNRZ1066]
 gi|116627504|ref|YP_820123.1| putative metalloprotease [Streptococcus thermophilus LMD-9]
 gi|62901187|sp|Q5M0P3|RRMF_STRT1 RecName: Full=Probable rRNA maturation factor
 gi|62901191|sp|Q5M579|RRMF_STRT2 RecName: Full=Probable rRNA maturation factor
 gi|122267898|sp|Q03LJ5|RRMF_STRTD RecName: Full=Probable rRNA maturation factor
 gi|55736681|gb|AAV60323.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738572|gb|AAV62213.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
 gi|116100781|gb|ABJ65927.1| Predicted metal-dependent hydrolase [Streptococcus thermophilus
           LMD-9]
 gi|312278022|gb|ADQ62679.1| Putative metalloprotease [Streptococcus thermophilus ND03]
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-----------FASSDGCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S                A +   + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDITFDEEDLAENPELAEMMGEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  +E  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  SYIGELFISIDKAREQAEEYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|210135319|ref|YP_002301758.1| putative metalloprotease [Helicobacter pylori P12]
 gi|226701640|sp|B6JN00|RRMF_HELP2 RecName: Full=Probable rRNA maturation factor
 gi|210133287|gb|ACJ08278.1| metalloprotease [Helicobacter pylori P12]
          Length = 140

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELILVSGETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINVPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   EN +  L IHG LHLLGYDH  DK
Sbjct: 81  ENALKLGHSLENEIALLFIHGVLHLLGYDHEKDK 114


>gi|302534335|ref|ZP_07286677.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302443230|gb|EFL15046.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 165

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 11/125 (8%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAY 108
           + ELS++  D   +E L+ ++  +  PT+V+SFP           +     +LGDIVL  
Sbjct: 34  LSELSVIVIDEDAMEQLHIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCP 93

Query: 109 EIIEIEANVLGKE--FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE----DL 162
           E+ + + +        +  L  L +HG LHLLGYDH +  +   M GL+ +I++    + 
Sbjct: 94  EVAKKQGDEAPTRHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAER 153

Query: 163 GINDP 167
           GI  P
Sbjct: 154 GITGP 158


>gi|302528837|ref|ZP_07281179.1| metal-dependent hydrolase [Streptomyces sp. AA4]
 gi|302437732|gb|EFL09548.1| metal-dependent hydrolase [Streptomyces sp. AA4]
          Length = 183

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 41  SNLISKGYFVKEN-----IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TA 89
           ++++S   +  E      + ELS++      +E L+  +  +  PT+V++FP      + 
Sbjct: 16  ASIVSAARYTLEKMEVSPLAELSILCVTLEVMEDLHERWMDLPGPTDVMAFPMDELDSSR 75

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
              +   S  +LGDIVL     + +A   G    + L  L +HG LHLLGYDH +  +  
Sbjct: 76  RPDAPDSSPALLGDIVLCPAFAKDQAKTAGHRLIDELHLLTVHGCLHLLGYDHAEPAEER 135

Query: 150 VMEGLERSIL 159
            M GL++ IL
Sbjct: 136 EMFGLQKRIL 145


>gi|169331623|ref|ZP_02860816.1| hypothetical protein ANASTE_00007 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259685|gb|EDS73651.1| hypothetical protein ANASTE_00007 [Anaerofustis stercorihominis DSM
           17244]
          Length = 152

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS 98
           A++  +    F K + V +SLV  +S  I+TLN  YR IDK T+VLSFP      +    
Sbjct: 27  AINKTLEYENFKKPSQVSVSLV--NSEEIKTLNNYYRNIDKTTDVLSFPMDDDEFED-EV 83

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           ++LGD+VL  +  + +A   G   +  + +L +H  LHLLG+D
Sbjct: 84  IILGDVVLCLDKAKEQAIEFGHSLDREICYLTVHSTLHLLGFD 126


>gi|224534895|ref|ZP_03675464.1| conserved hypothetical protein [Borrelia spielmanii A14S]
 gi|224513835|gb|EEF84160.1| conserved hypothetical protein [Borrelia spielmanii A14S]
          Length = 155

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 17/141 (12%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKFDLNLLVENIKFE---HLSIFYD--FILSVLNTLSISDF------ELSVILCDNVYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+++++E ++  A     E
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNEDNEVNEGLVDGINYKIQGDLIISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDH 142
               L  + IHG LHL+GY H
Sbjct: 110 IYEELQRVTIHGILHLMGYKH 130


>gi|238809604|dbj|BAH69394.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 173

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + L E  + + + NL  +  F     V + +  T++  I+ LN EYR  D PT++LSF  
Sbjct: 35  KFLFEKEYKQILENLAKE--FGLNQTVSVDVTITNNDEIQKLNKEYRNKDYPTDILSFGL 92

Query: 89  A-FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             +   +      LG++V+++E +E +A            +L  HG +HL+GYDH  + +
Sbjct: 93  EDWELFENMPIYPLGELVISHEKVEAQAQEFVHSIRREYCYLFAHGLIHLMGYDHETEVE 152

Query: 148 ACVMEGLERSILEDLGIN 165
              M  L   I E L I+
Sbjct: 153 RAEMNKLVDLIFEPLKIS 170


>gi|257068880|ref|YP_003155135.1| hypothetical protein Bfae_17240 [Brachybacterium faecium DSM 4810]
 gi|256559698|gb|ACU85545.1| conserved hypothetical protein TIGR00043 [Brachybacterium faecium
           DSM 4810]
          Length = 153

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEI 110
            E+S++F D   +E L+ ++  +  PT+V+SFP                +LGD+VL   +
Sbjct: 35  TEMSILFVDEAAMEKLHVQWLDLPGPTDVMSFPMDELIPGTPQQPAPEGLLGDVVLCPSV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L +H  LHLLGYDH+++ +   M  L+R +L
Sbjct: 95  AAAQAAEAGHSPVEEMLLLTVHSILHLLGYDHMEEDERTEMFDLQRKLL 143


>gi|227504551|ref|ZP_03934600.1| metalloprotease [Corynebacterium striatum ATCC 6940]
 gi|227198871|gb|EEI78919.1| metalloprotease [Corynebacterium striatum ATCC 6940]
          Length = 201

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 9/116 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDGCSSL---MLGDIV 105
            E ++   D   I  L+  +  ++ PT+V+SFP       A  +      +   MLGDIV
Sbjct: 36  AECTITAVDLETIADLHVRWMDLEGPTDVMSFPMDEITPGALGTRPDAPEMGPAMLGDIV 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           L  E    +AN  G    + L  L +HG LHLLGYDH    +   M  L+  +L D
Sbjct: 96  LCPEFALRQANAAGHSLGHELALLTVHGCLHLLGYDHATPAEEKEMFSLQNELLAD 151


>gi|94970564|ref|YP_592612.1| hypothetical protein Acid345_3537 [Candidatus Koribacter versatilis
           Ellin345]
 gi|123381297|sp|Q1IKR2|RRMF_ACIBL RecName: Full=Probable rRNA maturation factor
 gi|94552614|gb|ABF42538.1| protein of unknown function UPF0054 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 152

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 9/107 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ ++ T S  +  LN  +R  DK T+VLSFP   A  DG +    GDI ++ +I    A
Sbjct: 32  QVQVLVTSSDELRGLNRRFRRKDKATDVLSFP---AIVDGEA----GDIAISSDIASEYA 84

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             LG   +  L  LI+HG LHL G+DH  ++D   ME LE  + + L
Sbjct: 85  YELGHSLDEELRILILHGVLHLAGHDH--ERDKGEMEALESELRDKL 129


>gi|302039360|ref|YP_003799682.1| hypothetical protein NIDE4088 [Candidatus Nitrospira defluvii]
 gi|300607424|emb|CBK43757.1| conserved protein of unknown function, putative Metalloprotease
           [Candidatus Nitrospira defluvii]
          Length = 156

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 3/105 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           LSL      R+  LN  +R  DK T+VL+F T      G  S +LGD+V++      +A 
Sbjct: 37  LSLEIVGDVRMRRLNRTFRHRDKTTDVLAFATR--EGPGPPSSLLGDVVISLPQAIRQAR 94

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILE 160
             G+  ++ L  L+IHG LHL GYDH   + +A  M   E+++L 
Sbjct: 95  RHGQGVDHELAVLLIHGILHLCGYDHERSEAEAQRMSRREKALLR 139


>gi|255323734|ref|ZP_05364862.1| putative metalloprotease [Corynebacterium tuberculostearicum SK141]
 gi|255299224|gb|EET78513.1| putative metalloprotease [Corynebacterium tuberculostearicum SK141]
          Length = 205

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDG-------CSSLMLGD 103
            E ++   D   IE L+  +  ++ PT+V+SFP    T  A + G           MLGD
Sbjct: 36  AECTITCVDLKTIEDLHVRWMDLEGPTDVMSFPMDELTPGAIAGGGRPDAADPGPAMLGD 95

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           IVL  E    +A   G    + L  L +HG LHLLGYDH    +   M G +  +L D
Sbjct: 96  IVLCPEFALRQAEAAGHSLGHELALLTVHGCLHLLGYDHSTPAEEKEMFGRQNELLAD 153


>gi|260903864|ref|ZP_05912186.1| hypothetical protein BlinB_00925 [Brevibacterium linens BL2]
          Length = 162

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEII 111
            EL++   D+  +  L+  +  ++ PT+V+SFP            +   +GDI++  E+ 
Sbjct: 35  AELAVTMVDATAMAELHVTWMDLEGPTDVMSFPMDQLTQGQPGAPTEGQMGDIIICPEVA 94

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             +A+  G    + ++ L +HGFLHLLGYDH +  +   M  L+R +L
Sbjct: 95  AAQASSSGHTTMDEVLLLTVHGFLHLLGYDHGEPAEKEEMFTLQRHLL 142


>gi|237751248|ref|ZP_04581728.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229372614|gb|EEO23005.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 200

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 10/120 (8%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA---SSDGCSSLMLGDIVLA 107
           K+N+  + L+F DS  ++ LN +Y   D PT+VLSFP       SSD      LG I++ 
Sbjct: 75  KQNLY-IELIFVDSESMQELNKQYMAKDYPTDVLSFPLEIQDIESSDMPQC--LGSIIIN 131

Query: 108 -YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
            YE+ + +A +           L IH FLHLLG+DH  + D      +E++I+E LG+ D
Sbjct: 132 IYEVCD-KAALYKHNPYAEFSLLFIHAFLHLLGFDH--ECDNGEQRAVEQAIIESLGLPD 188


>gi|324991447|gb|EGC23380.1| metalloprotease [Streptococcus sanguinis SK353]
          Length = 165

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL-------- 99
           KEN  E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L        
Sbjct: 33  KEN-KEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEM 91

Query: 100 ------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                  +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M G
Sbjct: 92  LEDFDAYIGELFISVDKAREQAEEFGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFG 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|311741361|ref|ZP_07715185.1| metalloprotease [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311303531|gb|EFQ79610.1| metalloprotease [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 205

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDG-------CSSLMLGD 103
            E ++   D   IE L+  +  ++ PT+V+SFP    T  A + G           MLGD
Sbjct: 36  AECTVTCVDLKTIEDLHVRWMDLEGPTDVMSFPMDELTPGAIAGGGRPDAADPGPAMLGD 95

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           IVL  E    +A   G    + L  L +HG LHLLGYDH    +   M G +  +L D
Sbjct: 96  IVLCPEFALRQAEAAGHSLGHELALLTVHGCLHLLGYDHSTPAEEKEMFGRQNELLAD 153


>gi|322387706|ref|ZP_08061315.1| metalloprotease [Streptococcus infantis ATCC 700779]
 gi|321141573|gb|EFX37069.1| metalloprotease [Streptococcus infantis ATCC 700779]
          Length = 165

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-----------FASSDGCSSLM---- 100
           E+++ F  + R   LN E+R  D+PT+V+S                A     + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEFRATDRPTDVISLEYKPELEITFDEEDLAEDPDLAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  SYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|216263745|ref|ZP_03435739.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
 gi|215979789|gb|EEC20611.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
          Length = 152

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 14/138 (10%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLGIFYD--FILSVLNTLSISDF------ELSVILCDNVYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + LN ++R  ++PT+VLSF     + D   G +  + GD+++++E ++  A     E   
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNEVNEDLVDGINYKIQGDLIISFEYLKFSAQEFNVEIYE 109

Query: 125 HLVHLIIHGFLHLLGYDH 142
            L  + IHG LHL+GY H
Sbjct: 110 ELQRVTIHGILHLMGYKH 127


>gi|332673960|gb|AEE70777.1| probable metalloprotease [Helicobacter pylori 83]
          Length = 142

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|312863688|ref|ZP_07723926.1| translation metalloprotein YbeY [Streptococcus vestibularis F0396]
 gi|322517153|ref|ZP_08070037.1| metalloprotease [Streptococcus vestibularis ATCC 49124]
 gi|311101224|gb|EFQ59429.1| translation metalloprotein YbeY [Streptococcus vestibularis F0396]
 gi|322124303|gb|EFX95814.1| metalloprotease [Streptococcus vestibularis ATCC 49124]
          Length = 145

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-----------FASSDGCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S                A +   + +M    
Sbjct: 17  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDITFDEEDLAENPELAEMMGEFD 76

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  +E  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 77  SYIGELFISIDKAREQAEEYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 136

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 137 LTAYGLT 143


>gi|322372541|ref|ZP_08047077.1| putative metalloprotease Str0617 [Streptococcus sp. C150]
 gi|321277583|gb|EFX54652.1| putative metalloprotease Str0617 [Streptococcus sp. C150]
          Length = 165

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-----------FASSDGCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S                A +   + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEVDITFDEEDLAENPELAEMMGEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  +E  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  SYIGELFISVDKAHEQAEEYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|319946538|ref|ZP_08020773.1| metalloprotease [Streptococcus australis ATCC 700641]
 gi|319747284|gb|EFV99542.1| metalloprotease [Streptococcus australis ATCC 700641]
          Length = 165

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         +F   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEMEISFDEEDLEENPELAEMMAEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  TYIGELFISIDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|309800250|ref|ZP_07694426.1| conserved hypothetical protein [Streptococcus infantis SK1302]
 gi|308116103|gb|EFO53603.1| conserved hypothetical protein [Streptococcus infantis SK1302]
          Length = 165

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN E+R  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEFRDTDRPTDVISLEYKPELEIAFDEEDLENDPDLADMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|222152665|ref|YP_002561840.1| putative metalloprotease [Streptococcus uberis 0140J]
 gi|254803968|sp|B9DRF7|RRMF_STRU0 RecName: Full=Probable rRNA maturation factor
 gi|222113476|emb|CAR41204.1| conserved hypothetical protein [Streptococcus uberis 0140J]
          Length = 166

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 26/165 (15%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E  L   EI  +TL  + FA   +    K         E+S+ F  + R   LN EYR  
Sbjct: 8   ETGLVSQEIMEQTLDLLNFAARKTGKDEK---------EMSVTFVTNERSHELNLEYRDT 58

Query: 78  DKPTNVLSF------PTAFASSD-----GCSSLM------LGDIVLAYEIIEIEANVLGK 120
           D+PT+V+S       P  F   D       + ++      +G++ ++ +  + +A   G 
Sbjct: 59  DRPTDVISLEYKPESPILFDERDLEENPDLAEMLSEFDAYIGELFISIDKAKEQAQEYGH 118

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 119 SFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 163


>gi|296269140|ref|YP_003651772.1| hypothetical protein Tbis_1157 [Thermobispora bispora DSM 43833]
 gi|296091927|gb|ADG87879.1| protein of unknown function UPF0054 [Thermobispora bispora DSM
           43833]
          Length = 156

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSD---GCSSLMLGDIVL 106
           + ELS++  D   +  L+  + G   PT+VL+FP       ++ D     +  +LGD+VL
Sbjct: 34  LAELSILVVDEAAMAELHERWMGEPGPTDVLAFPMDELRPHSTRDEEHPPNPALLGDVVL 93

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             ++   +A   G   +  L  L  HG LHLLGYDH + ++   M GL+  +L
Sbjct: 94  CPQVAAKQAAEAGHGAQEELELLCTHGILHLLGYDHAEPEEHAEMFGLQEELL 146


>gi|322389991|ref|ZP_08063530.1| metalloprotease [Streptococcus parasanguinis ATCC 903]
 gi|321143304|gb|EFX38743.1| metalloprotease [Streptococcus parasanguinis ATCC 903]
          Length = 165

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S         +F   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEMEISFDEEDLTENPELAEMMAEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  TYIGELFISIDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|72387740|ref|XP_844294.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62359446|gb|AAX79883.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70800827|gb|AAZ10735.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 205

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 35/164 (21%)

Query: 36  FAKAVSNLISKGYFVKE--NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----T 88
           FA  V  L       +     VELS+ F    R+  LN E+RG+DKPT+VL+FP     T
Sbjct: 18  FAAGVQGLTEAVLLAERAPQAVELSIHFVTPGRMHELNLEHRGVDKPTDVLTFPGSGSGT 77

Query: 89  AFAS-------------SDGC----------SSLM--LGDIVLAYEIIEIEANVLGK--- 120
            +A               + C           +L+  LGDI  + E I +  +       
Sbjct: 78  PYAKFLNETVLLARVEGDNACVADPSVLAERRALLQELGDIYFSVEYISMRCSCRPTHCL 137

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            F ++L   + H  LH LGYDH   +    M   ER +   L +
Sbjct: 138 RFHDYLQAALTHALLHALGYDHATPEQWKRMTKRERFLRHRLSV 181


>gi|304439779|ref|ZP_07399677.1| metal dependent hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371766|gb|EFM25374.1| metal dependent hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 144

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 5/110 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+ F     I  LN +YRG+D+ T+VLSFP      D   + MLGDIV+    +  +A
Sbjct: 39  EVSVSFVGDDEIHELNRDYRGVDRTTDVLSFPM-----DDEFTNMLGDIVININKVIEQA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G   +  + +L +H  LHL+G+DH +++D   M  +E  ++E L I+
Sbjct: 94  KEYGHSEKREISYLTVHSSLHLMGFDHEEEEDKKEMRAVEDRVMEKLEIS 143


>gi|298245008|ref|ZP_06968814.1| protein of unknown function UPF0054 [Ktedonobacter racemifer DSM
           44963]
 gi|297552489|gb|EFH86354.1| protein of unknown function UPF0054 [Ktedonobacter racemifer DSM
           44963]
          Length = 216

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 34/190 (17%)

Query: 4   KKVNL----PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSL 59
           KK N+    P ++L I +E+A     I  + L  V   + VS  +S    + E I+ ++L
Sbjct: 27  KKRNIMHEHPLIELYITIEDAQQSAAIE-KALENVNLDEVVSQTLS-AVNIHEPIM-VTL 83

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFP---------------TAFASSDGCSSLM---- 100
           + TD   I  +N +YR IDK T+VLSFP                   S  G    +    
Sbjct: 84  LVTDDEGIRDMNKQYREIDKATDVLSFPLLNEPLVQAPAEQLWPVRESEAGAQESVPDFI 143

Query: 101 --------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                   LGDIV+++  +E +A          L++L+ HG LHL+GYD   +     M 
Sbjct: 144 TPPETVQNLGDIVMSWPTLERQAQEAKHSTIYELLYLLSHGMLHLVGYDDHTEAGYQAMV 203

Query: 153 GLERSILEDL 162
           G+++ ++  L
Sbjct: 204 GIQQRVMNTL 213


>gi|148377382|ref|YP_001256258.1| hypothetical protein MAG_1150 [Mycoplasma agalactiae PG2]
 gi|148291428|emb|CAL58813.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2]
          Length = 152

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 8/133 (6%)

Query: 36  FAKAVSNLISKGYFV---KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           + + +SNL  + YF    KE  V++S+V  ++ +I+ LN EYR  D  T++LSF     S
Sbjct: 20  YEQILSNL--QTYFKLEDKEISVDVSIV--NNRKIKKLNKEYRQKDYATDILSFDFGDKS 75

Query: 93  -SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                  L LG++V+++E +E +A   G        +L  HG +HL+GYDH  + +   M
Sbjct: 76  LYKSMPFLPLGELVISHEKVEEQAKEFGHSLRREYCYLYAHGLIHLMGYDHEVENERIEM 135

Query: 152 EGLERSILEDLGI 164
             +  +I   L I
Sbjct: 136 NKIVDAIFNPLNI 148


>gi|242309876|ref|ZP_04809031.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523877|gb|EEQ63743.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 150

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +  L+  D+  I+ LN  +R  D PT+VLSFP      +   SL+LG IV++ + ++  +
Sbjct: 40  QCELLLVDNPTIQALNCSHRNKDMPTDVLSFPL-----ESEFSLLLGSIVISLDFVKSAS 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
             L    E+ +  L IHG LHL+G+DH
Sbjct: 95  AKLNHSLEDEIALLFIHGALHLIGFDH 121


>gi|225551912|ref|ZP_03772852.1| conserved hypothetical protein [Borrelia sp. SV1]
 gi|225370910|gb|EEH00340.1| conserved hypothetical protein [Borrelia sp. SV1]
          Length = 155

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I+ LN
Sbjct: 5   DLNLLVENIKFE---HLSVFYD--FIVSVLNTLSISDF------ELSVILCDNAYIQELN 53

Query: 72  FEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            ++R  ++PT+VLSF     +       DG +  + GD+V+++E ++  A     E    
Sbjct: 54  NKFRNKNEPTDVLSFNYNEHNELNEDLVDGINCKIQGDLVISFEYLKFSAQEFNVEIYEE 113

Query: 126 LVHLIIHGFLHLLGYDH 142
           L  + IHG LHL+GY H
Sbjct: 114 LQRVTIHGILHLMGYKH 130


>gi|325687313|gb|EGD29335.1| metalloprotease [Streptococcus sanguinis SK72]
          Length = 165

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL-------- 99
           KEN  E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L        
Sbjct: 33  KEN-KEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEM 91

Query: 100 ------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                  +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M G
Sbjct: 92  LDDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFG 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|125718418|ref|YP_001035551.1| metalloprotease [Streptococcus sanguinis SK36]
 gi|166231428|sp|A3CP96|RRMF_STRSV RecName: Full=Probable rRNA maturation factor
 gi|125498335|gb|ABN45001.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
          Length = 165

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL-------- 99
           KEN  E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L        
Sbjct: 33  KEN-KEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEM 91

Query: 100 ------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                  +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M G
Sbjct: 92  LEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFG 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|325690750|gb|EGD32751.1| metalloprotease [Streptococcus sanguinis SK115]
 gi|325696182|gb|EGD38073.1| metalloprotease [Streptococcus sanguinis SK160]
          Length = 165

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL-------- 99
           KEN  E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L        
Sbjct: 33  KEN-KEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEM 91

Query: 100 ------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                  +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M G
Sbjct: 92  LEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFG 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|303246548|ref|ZP_07332827.1| protein of unknown function UPF0054 [Desulfovibrio fructosovorans
           JJ]
 gi|302492258|gb|EFL52133.1| protein of unknown function UPF0054 [Desulfovibrio fructosovorans
           JJ]
          Length = 149

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  LN +Y G+  PTNVLSFP    + D      LG++ ++ +    EA + G++   HL
Sbjct: 48  MARLNSDYLGLCGPTNVLSFP----ADDPDRPDYLGEMAVSRDTAAREAFLYGQDPTEHL 103

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
             L+ HGFLHL G+DH       +M+GL  +  +
Sbjct: 104 TRLLAHGFLHLAGFDH-----GPLMDGLTEAACQ 132


>gi|323351168|ref|ZP_08086824.1| metalloprotease [Streptococcus sanguinis VMC66]
 gi|322122392|gb|EFX94103.1| metalloprotease [Streptococcus sanguinis VMC66]
 gi|327470589|gb|EGF16045.1| metalloprotease [Streptococcus sanguinis SK330]
          Length = 165

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL-------- 99
           KEN  E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L        
Sbjct: 33  KEN-KEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELVEM 91

Query: 100 ------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                  +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M G
Sbjct: 92  LEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTSEEEAEMFG 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|315587050|gb|ADU41431.1| probable metalloprotease [Helicobacter pylori 35A]
          Length = 142

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV   + R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDKTMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|298346301|ref|YP_003718988.1| metalloprotease [Mobiluncus curtisii ATCC 43063]
 gi|304389934|ref|ZP_07371891.1| probable metalloprotease [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315654890|ref|ZP_07907795.1| metalloprotease [Mobiluncus curtisii ATCC 51333]
 gi|315657186|ref|ZP_07910070.1| metalloprotease [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|298236362|gb|ADI67494.1| metalloprotease [Mobiluncus curtisii ATCC 43063]
 gi|304326827|gb|EFL94068.1| probable metalloprotease [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315490851|gb|EFU80471.1| metalloprotease [Mobiluncus curtisii ATCC 51333]
 gi|315492289|gb|EFU81896.1| metalloprotease [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 150

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            E++++F D   +  L+ ++  +  PT+VLSFP    T        ++ +LGDIVL  ++
Sbjct: 35  AEVNIMFVDIKTMTDLHVKWMDLPGPTDVLSFPMDELTPGREGVPSAAGVLGDIVLCPDV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L +HG LHLLG+DH + ++   M  L+R +L
Sbjct: 95  AAEQARDAGHAPIEEMLLLTVHGLLHLLGFDHAEPEEEKTMFTLQRKLL 143


>gi|320450010|ref|YP_004202106.1| hypothetical protein TSC_c09320 [Thermus scotoductus SA-01]
 gi|320150179|gb|ADW21557.1| conserved hypothetical protein [Thermus scotoductus SA-01]
          Length = 138

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++++ T   RI  L  E+ G D+ T+VLSFP  +   D      LGDI ++ +  + +A 
Sbjct: 35  VTVILTGDRRIRVLKREWWGEDEATDVLSFPH-YEPGDPFVPPHLGDIWISLDTAKRQAE 93

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             G   E  ++ L  HG  HLLG+DH  ++D    EG  R
Sbjct: 94  ERGVPLEEEVLVLAAHGLWHLLGHDHQKEED---WEGFHR 130


>gi|254779710|ref|YP_003057816.1| putative metalloprotease [Helicobacter pylori B38]
 gi|254001622|emb|CAX29737.1| Conserved hypothetical protein [Helicobacter pylori B38]
          Length = 140

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELILVSDETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E  +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHRLEEEIALLFIHGVLHLLGYDHEKDK 114


>gi|33239659|ref|NP_874601.1| metal-dependent hydrolase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|46577394|sp|Q7VE08|RRMF_PROMA RecName: Full=Probable rRNA maturation factor
 gi|33237184|gb|AAP99253.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 195

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 42  NLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCSSL 99
           NL       K     + L+FT+   I  +N E+R  D+ T+VLSFP             L
Sbjct: 61  NLTCPQIVRKNRFFSMGLLFTNDLSIRQMNKEWRKKDESTDVLSFPAIDEHIVLPPNQFL 120

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
            LGDI+++ E    +A +      + L  L+ HGFLHLLG+DH
Sbjct: 121 ELGDIIVSVETAFKQAKIHNHSLMHELRWLVSHGFLHLLGWDH 163


>gi|317009770|gb|ADU80350.1| putative metalloprotease [Helicobacter pylori India7]
          Length = 140

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + RG D  T+VLSFP             LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDLRGCDYATDVLSFPLEVVPHTP-----LGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHRLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|242061044|ref|XP_002451811.1| hypothetical protein SORBIDRAFT_04g008060 [Sorghum bicolor]
 gi|241931642|gb|EES04787.1| hypothetical protein SORBIDRAFT_04g008060 [Sorghum bicolor]
          Length = 457

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 16/147 (10%)

Query: 11  LDLQIAVENALWGD-EI-----HLRTLCEVVFAKAVSNLISKGYFVKENIV--------- 55
           L +QI +E AL  D EI      LRT        A+++L    Y  ++  V         
Sbjct: 94  LSVQIGIEEALPDDPEILGIAETLRTDVGKAVKLALNDLEGSDYITRDPSVCNVNKYASI 153

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+SL+  D   I  LN E+R  D  T+VLS        D    L LGDIV++ E    +A
Sbjct: 154 EVSLLLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPELD-IPILQLGDIVISVETARRQA 212

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G    + +  L++HG LHLLG+DH
Sbjct: 213 EERGHTLLDEIRILMVHGLLHLLGFDH 239


>gi|218296577|ref|ZP_03497305.1| protein of unknown function UPF0054 [Thermus aquaticus Y51MC23]
 gi|218243119|gb|EED09651.1| protein of unknown function UPF0054 [Thermus aquaticus Y51MC23]
          Length = 139

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++++ T   RI  L   + G D+ T+VLSFP  +   D      LGDI ++ +    +A 
Sbjct: 36  VTVILTGDRRIRALKRAWWGEDEATDVLSFPH-YEPGDPFVPPHLGDIWISLDTARRQAE 94

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             G   E  ++ L  HG  HLLG+DH  ++D    EG  R
Sbjct: 95  ARGAPLEEEVLVLAAHGLWHLLGHDHQKEED---WEGFHR 131


>gi|261327447|emb|CBH10422.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 205

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 35/164 (21%)

Query: 36  FAKAVSNLISKGYFVKE--NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----T 88
           FA  V  L       +     VELS+ F    R+  LN E+RG+DKPT+VL+FP     T
Sbjct: 18  FAAGVQGLTEAVLLAERAPQAVELSIHFVTPGRMHELNLEHRGVDKPTDVLTFPGSGSGT 77

Query: 89  AFAS-------------SDGC----------SSLM--LGDIVLAYEIIEIEANVLGK--- 120
            +A               + C           +L+  LGDI  + E I +  +       
Sbjct: 78  PYAKFLNETVLLARVEGDNACVADPSVLAERRALLQELGDIYFSVEYIWMRCSCRPTHCL 137

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            F ++L   + H  LH LGYDH   +    M   ER +   L +
Sbjct: 138 RFHDYLQAALTHALLHALGYDHATPEQWKRMTKRERFLRHRLSV 181


>gi|225851483|ref|YP_002731717.1| hypothetical protein PERMA_1963 [Persephonella marina EX-H1]
 gi|254801505|sp|C0QSS1|RRMF_PERMH RecName: Full=Probable rRNA maturation factor
 gi|225645941|gb|ACO04127.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 153

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 2/109 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S+  TD   I+ +N ++RG DKPT+VLSFP            +LGD+V++    + +
Sbjct: 36  VEISITLTDDSTIKEINRQWRGKDKPTDVLSFPID-EKPPKYRYRILGDVVISLPYAKKQ 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
           A  +G  +   ++ L+IHG LHLLGYDH   +K+A VM  L+  I E++
Sbjct: 95  AEEIGLPYREEIIRLLIHGILHLLGYDHERSEKEAQVMFSLQDEIFENI 143


>gi|256828058|ref|YP_003156786.1| hypothetical protein Dbac_0243 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577234|gb|ACU88370.1| protein of unknown function UPF0054 [Desulfomicrobium baculatum DSM
           4028]
          Length = 146

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +LSL   D   +  LN +Y G   PTNVLSFP      D      LGD+VL+ E +  E 
Sbjct: 38  QLSLRIVDDREMAELNGQYMGCLGPTNVLSFP---GDED-----WLGDLVLSAETLVREC 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            +  ++   + V L+ HG LHL+G+DH  + +A
Sbjct: 90  RLYNQDPHEYTVRLLAHGLLHLMGHDHGPEMEA 122


>gi|49388540|dbj|BAD25662.1| haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica
           Group]
 gi|49388674|dbj|BAD25858.1| haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica
           Group]
          Length = 543

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 16/147 (10%)

Query: 11  LDLQIAVENALWGDE--IHLRTLCEVVFAKAVS----NLISKGYFVKEN---------IV 55
           L++QI +E AL  D   + +    ++  AKA      +L +  Y  ++N          V
Sbjct: 100 LNVQIGIEEALPDDPTILSIAEALQMDVAKAAKVAFDHLENSEYKTRDNCISDVNKYDTV 159

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S++  D   I  LN E+R  D  T+VLS        D    L LGDIV++ +  + +A
Sbjct: 160 EVSILLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLD-IPILQLGDIVISIDTAQRQA 218

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G    + +  L++HG LHLLG+DH
Sbjct: 219 EERGHTLHDEIRILMVHGLLHLLGFDH 245


>gi|125538685|gb|EAY85080.1| hypothetical protein OsI_06436 [Oryza sativa Indica Group]
          Length = 543

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 16/147 (10%)

Query: 11  LDLQIAVENALWGDE--IHLRTLCEVVFAKAVS----NLISKGYFVKEN---------IV 55
           L++QI +E AL  D   + +    ++  AKA      +L +  Y  ++N          V
Sbjct: 100 LNVQIGIEEALPDDPTILSIAEALQMDVAKAAKVAFDHLENSEYKTRDNCISDVNKYDTV 159

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S++  D   I  LN E+R  D  T+VLS        D    L LGDIV++ +  + +A
Sbjct: 160 EVSILLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLD-IPILQLGDIVISIDTAQRQA 218

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G    + +  L++HG LHLLG+DH
Sbjct: 219 EERGHTLHDEIRILMVHGLLHLLGFDH 245


>gi|227488408|ref|ZP_03918724.1| metalloprotease [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091622|gb|EEI26934.1| metalloprotease [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 174

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FASSDG------CSSLMLGDIVLA 107
           VE+++   D   IE L+  +  ++ PT+V+SFP    +S+ G           LGDI+L 
Sbjct: 36  VEVTITCVDLDTIEDLHVRWLDLEGPTDVMSFPMDDISSTSGRPDAADPGPAYLGDIILC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            +  + +A+  G    + L  L +HG LHLLGYDH    +   M  L+  IL+
Sbjct: 96  PDFAQKQADKAGHSLNHELDLLTVHGCLHLLGYDHAKPNEEQHMFALQNDILK 148


>gi|72383386|ref|YP_292741.1| hypothetical protein PMN2A_1550 [Prochlorococcus marinus str.
           NATL2A]
 gi|123620478|sp|Q46HJ0|RRMF_PROMT RecName: Full=Probable rRNA maturation factor
 gi|72003236|gb|AAZ59038.1| Protein of unknown function UPF0054 [Prochlorococcus marinus str.
           NATL2A]
          Length = 184

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEIIE 112
           L L  T+  +I  LN  + G  K T+VLSFP    T F  S+ C  + LGDIV++     
Sbjct: 74  LGLELTNDKKILDLNHAWLGQSKATDVLSFPIIDETFFGVSNEC--IELGDIVISVPTAI 131

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +A     +    L  L  HG LHLLG+DH D++    M  ++  +LE  GI
Sbjct: 132 RQAKDNNADLFRELRWLATHGLLHLLGWDHSDEESLHKMLLIQEQLLEIRGI 183


>gi|208435054|ref|YP_002266720.1| hypothetical protein HPG27_1104 [Helicobacter pylori G27]
 gi|226701639|sp|B5Z8F5|RRMF_HELPG RecName: Full=Probable rRNA maturation factor
 gi|208432983|gb|ACI27854.1| hypothetical protein HPG27_1104 [Helicobacter pylori G27]
          Length = 142

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELILVSGETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E  +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHRLEEEIALLFIHGVLHLLGYDHEKDK 114


>gi|327474676|gb|EGF20081.1| metalloprotease [Streptococcus sanguinis SK408]
          Length = 165

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL-------- 99
           KEN  E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L        
Sbjct: 33  KEN-KEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEM 91

Query: 100 ------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                  +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M G
Sbjct: 92  LEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFG 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|297598866|ref|NP_001046349.2| Os02g0227000 [Oryza sativa Japonica Group]
 gi|255670736|dbj|BAF08263.2| Os02g0227000 [Oryza sativa Japonica Group]
          Length = 361

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 11  LDLQIAVENALWGDE----IHLRTLCEVVFAKAVS----NLISKGYFVKEN--------- 53
           L++QI +E AL  D     I +    ++  AKA      +L +  Y  ++N         
Sbjct: 100 LNVQIGIEEALPDDPTILVISIAEALQMDVAKAAKVAFDHLENSEYKTRDNCISDVNKYD 159

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
            VE+S++  D   I  LN E+R  D  T+VLS        D    L LGDIV++ +  + 
Sbjct: 160 TVEVSILLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLD-IPILQLGDIVISIDTAQR 218

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +A   G    + +  L++HG LHLLG+DH
Sbjct: 219 QAEERGHTLHDEIRILMVHGLLHLLGFDH 247


>gi|297181414|gb|ADI17603.1| predicted metal-dependent hydrolase [uncultured delta
           proteobacterium HF0130_19C20]
          Length = 157

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------PTAFASSDGCSSLMLGDIVLAY 108
           +S++ T+   I+ LN ++   D PT++LS+             S +     + G++V++ 
Sbjct: 37  ISVLITNDVEIQKLNKQFLKKDYPTDILSWTYDLEEEKKAGLESKESREENIAGELVVSA 96

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDP 167
           E +  +A   G +FE  L+ L+ HG  HL G+DH + +K    M  LE  +L+D+G+N+ 
Sbjct: 97  ERVSKQAFENGWDFETELIRLLAHGCAHLAGWDHEESEKQERGMLDLEIQLLKDVGLNNI 156

Query: 168 Y 168
           Y
Sbjct: 157 Y 157


>gi|301321025|gb|ADK69668.1| metalloprotein, YbeY family [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 151

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 36  FAKAVSNLISK---GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           F K   N I K    YF     +ELS+ F +  + + +N +YR      +V SFP     
Sbjct: 3   FWKKFCNKILKTAYNYFNFNYDIELSITFVNDLKAQQINQQYRNHSYIADVTSFPVEMTE 62

Query: 93  SD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           ++        LGD+ +     + +A     +  + +  L +HGFLHLLGYDH D  D  +
Sbjct: 63  NEIKAIGFRELGDMFINLNEAKRKAIKYNHDLNSEMGFLFVHGFLHLLGYDHEDSNDEKI 122

Query: 151 MEGLERSILE 160
           M  L+  IL+
Sbjct: 123 MFDLQDQILK 132


>gi|42560996|ref|NP_975447.1| hypothetical protein MSC_0461 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|59799038|sp|Q6MTE7|RRMF_MYCMS RecName: Full=Probable rRNA maturation factor
 gi|42492493|emb|CAE77089.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
          Length = 164

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 36  FAKAVSNLISK---GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           F K   N I K    YF     +ELS+ F +  + + +N +YR      +V SFP     
Sbjct: 16  FWKKFCNKILKTAYNYFNFNYDIELSITFVNDLKAQQINQQYRNHSYIADVTSFPVEMTE 75

Query: 93  SD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           ++        LGD+ +     + +A     +  + +  L +HGFLHLLGYDH D  D  +
Sbjct: 76  NEIKAIGFRELGDMFINLNEAKRKAIKYNHDLNSEMGFLFVHGFLHLLGYDHEDSNDEKI 135

Query: 151 MEGLERSILE 160
           M  L+  IL+
Sbjct: 136 MFDLQDQILK 145


>gi|207091765|ref|ZP_03239552.1| putative metalloprotease [Helicobacter pylori HPKX_438_AG0C1]
          Length = 140

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      I  +N + RG D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSGETIREINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQTNAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
            LG   E  +  L IHG LHLLGYDH  DK
Sbjct: 85  KLGHRLEEEIALLFIHGVLHLLGYDHEKDK 114


>gi|203287529|ref|YP_002222544.1| hypothetical protein BRE_63 [Borrelia recurrentis A1]
 gi|226701633|sp|B5RQN9|RRMF_BORRA RecName: Full=Probable rRNA maturation factor
 gi|201084749|gb|ACH94323.1| uncharacterized conserved protein [Borrelia recurrentis A1]
          Length = 148

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 15  IAVENALWGDEIHLRTL-CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           I  E  LW + +  R L     F  +V N +     +KE   ELS++  ++  I+ LN E
Sbjct: 2   IKEELNLWAEGVEFRHLDAYYNFILSVLNFLC----IKE--YELSVILCNNEYIQKLNGE 55

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           +R   +PT+VLSF   F  S+  +  + GDIV++ E +E  +     E    L    IHG
Sbjct: 56  FRQKPEPTDVLSF-NYFEGSEQINHKIQGDIVISLEYLEFSSLEFNVEMYEELQRNTIHG 114

Query: 134 FLHLLGYDH 142
            LHL+GY H
Sbjct: 115 ILHLIGYTH 123


>gi|293363549|ref|ZP_06610305.1| metalloprotein, YbeY family [Mycoplasma alligatoris A21JP2]
 gi|292552898|gb|EFF41652.1| metalloprotein, YbeY family [Mycoplasma alligatoris A21JP2]
          Length = 158

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 7/132 (5%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-- 93
           F K ++NL  K +F  +  V + + F ++ ++  LN+++RG D PT++LSF   F  S  
Sbjct: 26  FEKILTNL--KTFFSIDKPVMVDVCFVNNDQMRKLNWKHRGKDYPTDILSF--GFEDSLI 81

Query: 94  -DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
            +    L LG++V++ + ++ +A       +    +L  HG +HL+GYDH  + +   M 
Sbjct: 82  NEQLPFLHLGELVISVDKVKEQALEFNHSEKREYCYLFTHGLVHLMGYDHELENERIHMN 141

Query: 153 GLERSILEDLGI 164
            +   I   L I
Sbjct: 142 NMVEEIFSPLNI 153


>gi|291320052|ref|YP_003515310.1| hypothetical protein MAGa1210 [Mycoplasma agalactiae]
 gi|290752381|emb|CBH40352.1| Conserved hypothetical protein [Mycoplasma agalactiae]
          Length = 152

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 8/133 (6%)

Query: 36  FAKAVSNLISKGYFV---KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           + + +SNL  + YF    KE  V++S+V  ++ +I+ LN EYR  D  T++LSF     S
Sbjct: 20  YEQILSNL--QTYFKLEDKEISVDVSIV--NNGKIKKLNKEYRQKDYATDILSFDFGDKS 75

Query: 93  -SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                  L LG++V+++E +E +A   G        +L  HG +HL+GYDH  + +   M
Sbjct: 76  LYKSMPFLPLGELVISHEKVEEQAKEFGHSLRREYCYLYAHGLIHLMGYDHEVENERIEM 135

Query: 152 EGLERSILEDLGI 164
             +  +I + L I
Sbjct: 136 NKIVDAIFDPLNI 148


>gi|328946701|gb|EGG40839.1| putative metalloprotease [Streptococcus sanguinis SK1087]
          Length = 165

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL-------- 99
           KEN  E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L        
Sbjct: 33  KEN-KEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEM 91

Query: 100 ------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                  +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M G
Sbjct: 92  LEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFG 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLT 163


>gi|302206650|gb|ADL10992.1| Putative metalloprotease [Corynebacterium pseudotuberculosis C231]
 gi|308276893|gb|ADO26792.1| Putative metalloprotease [Corynebacterium pseudotuberculosis I19]
          Length = 196

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVLA 107
            E+++   D   +  L+  +  ++ PT+V+SFP            +      +LGDI+L 
Sbjct: 36  AEVTISVVDVPTMSDLHVRWMDLEGPTDVMSFPMDELTPGMGRPDAGAPGPALLGDIILC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +    +A   G +  + L  L  HG LHLLGYDH++  D   M  L+  +L D
Sbjct: 96  PDFAMKQAEKAGHDLGHELALLTTHGCLHLLGYDHIEPADEQTMFSLQNELLSD 149


>gi|94271344|ref|ZP_01291941.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450472|gb|EAT01646.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 440

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---FASSDGCSSLMLGDIVLAY 108
           +   ELS++  D  R+  LN  YRG D+PTNVL+FP A     ++      +LGDIV+A 
Sbjct: 75  QAAAELSILLVDEQRMGQLNAHYRGQDRPTNVLAFPQADHDREAAGEAGPRLLGDIVIAP 134

Query: 109 EIIEIEANVLGKEFENHL 126
            +   EA  LG   +  L
Sbjct: 135 AVAAREARELGISRQRRL 152


>gi|300858949|ref|YP_003783932.1| hypothetical protein cpfrc_01532 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686403|gb|ADK29325.1| hypothetical protein cpfrc_01532 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302331199|gb|ADL21393.1| Putative metalloprotease [Corynebacterium pseudotuberculosis 1002]
          Length = 196

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVLA 107
            E+++   D   +  L+  +  ++ PT+V+SFP            +      +LGDI+L 
Sbjct: 36  AEVTISVVDVPTMSDLHVRWMDLEGPTDVMSFPMDELTPGMGRPDAGAPGPALLGDIILC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +    +A   G +  + L  L  HG LHLLGYDH++  D   M  L+  +L D
Sbjct: 96  PDFAMKQAEKAGHDLGHELALLTTHGCLHLLGYDHIEPADEQTMFSLQNELLSD 149


>gi|219109735|ref|XP_002176621.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411156|gb|EEC51084.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 192

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 30/138 (21%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI-- 113
           ++SL+  D   +   N E RG+D+PT+VLSFP   A   G  +  + DI   Y + ++  
Sbjct: 51  DVSLLLVDDQEMRETNEETRGMDEPTDVLSFPFTEAIEPGVLTPPVVDIGDYYNMGDMMI 110

Query: 114 ----------------------------EANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                                        A  +  + E  +  L++HG LHL+GYDH+DD
Sbjct: 111 DVPYVIRACQDDAKYSHSDLEDEDRGVSAAMAMVMDPEERINMLLVHGMLHLVGYDHIDD 170

Query: 146 KDACVMEGLERSILEDLG 163
            D  +M   E  IL  LG
Sbjct: 171 DDYQLMVAKEEEILRLLG 188


>gi|297380337|gb|ADI35224.1| conserved hypothetical protein [Helicobacter pylori v225d]
          Length = 140

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
             +EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QTIELVLVSDETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E  +  L IHG LHLLGYDH  DK
Sbjct: 81  TNAMKLGHSLEEEIALLFIHGVLHLLGYDHEKDK 114


>gi|289178678|gb|ADC85924.1| Hypothetical metal-binding protein [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 193

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           EL++ F D   I  L+  +  +  PT+V+SFP               MLGDIV+   + +
Sbjct: 48  ELTITFVDPEPIAELHERWMDLQGPTDVMSFPMDELRPGDERNEPEGMLGDIVICPWVAQ 107

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +    M GL+R +L
Sbjct: 108 QQAQAAGHSTMEEMMLLTIHGVLHLLGYDHHTREQERQMFGLQRQLL 154


>gi|311895962|dbj|BAJ28370.1| putative metallopeptidase [Kitasatospora setae KM-6054]
          Length = 164

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEII 111
           ELS++  DS  +  L+ ++  +  PT+V+SFP          +     +LGDIVL  E+ 
Sbjct: 36  ELSVILYDSESMAELHVQWMDLPGPTDVMSFPMDELRPGKEGEDLPEGLLGDIVLCPEVA 95

Query: 112 EIE--ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           + +  A       +  L  L +HG LH+LGYDH +  +   M  L++ IL+D
Sbjct: 96  KEQGLAAPTKHSMDEELQLLTVHGVLHVLGYDHEEPDEEREMFALQKRILDD 147


>gi|301794105|emb|CBW36511.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
 gi|332204970|gb|EGJ19035.1| hypothetical protein SPAR120_0938 [Streptococcus pneumoniae
           GA47901]
          Length = 165

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSD-----GCSSLM---- 100
           E+++ F  + R   LN  YR  D+PT+V+S         AF   D       + +M    
Sbjct: 37  EMAVTFVTNERSHELNLGYRDTDRPTDVISLEYKPELEIAFDEEDLLENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|315223062|ref|ZP_07864941.1| conserved hypothetical protein TIGR00043 [Streptococcus anginosus
           F0211]
 gi|319939222|ref|ZP_08013585.1| metal-dependent hydrolase [Streptococcus anginosus 1_2_62CV]
 gi|315188012|gb|EFU21748.1| conserved hypothetical protein TIGR00043 [Streptococcus anginosus
           F0211]
 gi|319811618|gb|EFW07894.1| metal-dependent hydrolase [Streptococcus anginosus 1_2_62CV]
          Length = 165

 Score = 58.2 bits (139), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLML-------- 101
           E+++ F  + R   LN EYR  D+PT+V+S         A    D   +  L        
Sbjct: 37  EMAVTFVTNERSHELNLEYRNTDRPTDVISLEYKPELDIAIDEEDLLENPELAEMLEDFD 96

Query: 102 ---GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
              G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISIDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|15673068|ref|NP_267242.1| putative metalloprotease [Lactococcus lactis subsp. lactis Il1403]
 gi|281491585|ref|YP_003353565.1| hypothetical protein LLKF_1113 [Lactococcus lactis subsp. lactis
           KF147]
 gi|29428253|sp|Q9CGL0|RRMF_LACLA RecName: Full=Probable rRNA maturation factor
 gi|12724042|gb|AAK05184.1|AE006341_3 hypothetical protein L94534 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281375303|gb|ADA64816.1| Hypothetical protein LLKF_1113 [Lactococcus lactis subsp. lactis
           KF147]
 gi|326406636|gb|ADZ63707.1| Putative metalloprotease [Lactococcus lactis subsp. lactis CV56]
          Length = 162

 Score = 58.2 bits (139), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-- 94
            K V    +K   +KE+  E+S+ F D+ R   LN +YR  D+PT+V+S       S+  
Sbjct: 20  TKEVLAFAAKKLNLKES-TEMSVTFVDNARSHELNLQYRETDRPTDVISLEYKPDESEFF 78

Query: 95  ------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                             +G++ ++ +    +A   G   E     L +HGFLH+ GYDH
Sbjct: 79  FDEDMELPEELLEEMDPFIGELFISIDKAAEQAADYGHSIEREYGWLAVHGFLHINGYDH 138

Query: 143 VDDKDACVMEGLERSILEDLGIN 165
              ++   M GL+  IL   G+ 
Sbjct: 139 YTPEEESEMFGLQEEILTAYGLT 161


>gi|183601565|ref|ZP_02962935.1| hypothetical protein BIFLAC_02897 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683900|ref|YP_002470283.1| metalloprotease [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190936|ref|YP_002968330.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196342|ref|YP_002969897.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|254800500|sp|B8DUM8|RRMF_BIFA0 RecName: Full=Probable rRNA maturation factor
 gi|183219171|gb|EDT89812.1| hypothetical protein BIFLAC_02897 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621550|gb|ACL29707.1| conserved hypothetical protein [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249328|gb|ACS46268.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250896|gb|ACS47835.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793925|gb|ADG33460.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 181

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIE 112
           EL++ F D   I  L+  +  +  PT+V+SFP               MLGDIV+   + +
Sbjct: 36  ELTITFVDPEPIAELHERWMDLQGPTDVMSFPMDELRPGDERNEPEGMLGDIVICPWVAQ 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +    M GL+R +L
Sbjct: 96  QQAQAAGHSTMEEMMLLTIHGVLHLLGYDHHTREQERQMFGLQRQLL 142


>gi|224531809|ref|ZP_03672441.1| conserved hypothetical protein [Borrelia valaisiana VS116]
 gi|224511274|gb|EEF81680.1| conserved hypothetical protein [Borrelia valaisiana VS116]
          Length = 155

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 17/141 (12%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLSVFYD--FILSVLNALSISDF------ELSVILCDNIYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+++++E ++  A     E
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNEHNELTGDLVDGINYKIQGDLIISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDH 142
               L  + IHG LHL+GY H
Sbjct: 110 IYEELQRVTIHGILHLMGYKH 130


>gi|300788461|ref|YP_003768752.1| metalloprotease [Amycolatopsis mediterranei U32]
 gi|299797975|gb|ADJ48350.1| putative metalloprotease [Amycolatopsis mediterranei U32]
          Length = 190

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLMLGDIVLA 107
           + ELS++      +E L+  +  +  PT+V++FP      +    +   S  +LGDIVL 
Sbjct: 34  LAELSILLVTLEVMEDLHERWMDLPGPTDVMAFPMDELDSSRRPDAPDASPALLGDIVLC 93

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
               + +A   G    + L  L +HG LHLLGYDH +  +   M  L++ IL
Sbjct: 94  PAFAKDQAKTAGHALIDELHLLTVHGVLHLLGYDHAEPAEEREMFALQKRIL 145


>gi|257466092|ref|ZP_05630403.1| metal-binding protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917249|ref|ZP_07913489.1| metal-binding protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691124|gb|EFS27959.1| metal-binding protein [Fusobacterium gonidiaformans ATCC 25563]
          Length = 164

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIEI 113
           +SL+ T + +I+ +N E+R  D PT+V+SF  A+  ++         LGDIV++ + +  
Sbjct: 52  VSLLLTGNEQIQGINREFRKKDSPTDVISF--AYHENEDFLVGPYDTLGDIVISLDRVGE 109

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +A      F     +++ HG LH+LGYDH++++D   M   E  IL   G
Sbjct: 110 QAKEYNHSFTREFYYVLTHGILHILGYDHIEEEDKKEMREREEEILGHFG 159


>gi|332358998|gb|EGJ36819.1| metalloprotease [Streptococcus sanguinis SK49]
          Length = 165

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL------------- 99
           E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L             
Sbjct: 37  EMAVTFVSNERSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEMLEDFD 96

Query: 100 -MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISVDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|308183263|ref|YP_003927390.1| putative metalloprotease [Helicobacter pylori PeCan4]
 gi|308065448|gb|ADO07340.1| putative metalloprotease [Helicobacter pylori PeCan4]
          Length = 140

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
             +EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QTIELVLVSDETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  TNALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|297571542|ref|YP_003697316.1| hypothetical protein Arch_0975 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931889|gb|ADH92697.1| protein of unknown function UPF0054 [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 170

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----CSSLMLGDIVLAYEII 111
           +LS+V  D   +  L+ E+  ++ PT+V+SFP             +  MLGDI +  ++ 
Sbjct: 37  DLSIVMLDEEAMSALHVEWMDLEGPTDVMSFPMDELRPTPLGVEPTPGMLGDIAICPQVA 96

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             +A   G      ++ L  HG LHLLGYDH +  +   M  L+R +L
Sbjct: 97  ARQALAAGHNTMEEILLLTTHGILHLLGYDHAEPDEKKEMFELQRRLL 144


>gi|257452112|ref|ZP_05617411.1| metal-binding protein [Fusobacterium sp. 3_1_5R]
 gi|317058658|ref|ZP_07923143.1| metal-binding protein [Fusobacterium sp. 3_1_5R]
 gi|313684334|gb|EFS21169.1| metal-binding protein [Fusobacterium sp. 3_1_5R]
          Length = 164

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 5/110 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIEI 113
           +SL+ T + +I+ +N E+R  D PT+V+SF  A+  ++         LGDIV++ + +  
Sbjct: 52  VSLLLTGNEQIQGINREFRKKDSPTDVISF--AYHENEDFLVGPYDTLGDIVISLDRVGE 109

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +A      F     +++ HG LH+LGYDH++++D   M   E  IL   G
Sbjct: 110 QAKEYNHSFTREFYYVLTHGILHILGYDHIEEEDKKEMREREEEILGHFG 159


>gi|322391810|ref|ZP_08065275.1| metalloprotease [Streptococcus peroris ATCC 700780]
 gi|321145290|gb|EFX40686.1| metalloprotease [Streptococcus peroris ATCC 700780]
          Length = 165

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----------TAFASSDGCSSLM---- 100
           E+++ F  + R   LN EYR  D+PT+V+S                A +   + +M    
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDITFEDEELAENPELAEMMSEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISIDKAHEQAEEYGHSFEREMGFLSVHGFLHINGYDHYTPEEEAEMFSLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|325263892|ref|ZP_08130625.1| putative metalloprotease [Clostridium sp. D5]
 gi|324030930|gb|EGB92212.1| putative metalloprotease [Clostridium sp. D5]
          Length = 165

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 16/126 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFAS----SDGC-----SS 98
            E++L+ T    I  +N  +R IDK T+VLSFP         F++    S  C       
Sbjct: 38  AEINLLLTSDEDIRDMNQMFRQIDKATDVLSFPMLEYQVPGDFSAMEEQSQDCFNPESGE 97

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           LMLGDIV++   +  +A   G         LI H  LHL GYDH+++++  +ME  +  I
Sbjct: 98  LMLGDIVISKNKVLAQAEAYGHSPRREYAFLIAHSMLHLFGYDHMEEEERLLMEQKQNDI 157

Query: 159 LEDLGI 164
           LE++ I
Sbjct: 158 LENIQI 163


>gi|332358727|gb|EGJ36550.1| metalloprotease [Streptococcus sanguinis SK355]
          Length = 165

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL------------- 99
           E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L             
Sbjct: 37  EMAVTFVSNDRSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEMLEDFD 96

Query: 100 -MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|332367329|gb|EGJ45064.1| metalloprotease [Streptococcus sanguinis SK1059]
          Length = 165

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL------------- 99
           E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L             
Sbjct: 37  EMAVTFVSNARSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEMLEDFD 96

Query: 100 -MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|317012939|gb|ADU83547.1| putative metalloprotease [Helicobacter pylori Lithuania75]
          Length = 142

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSGETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E  +  L IHG LHLLGYDH  DK
Sbjct: 81  ENALKLGHRLEEEIALLFIHGVLHLLGYDHEKDK 114


>gi|28493250|ref|NP_787411.1| hypothetical protein TWT283 [Tropheryma whipplei str. Twist]
 gi|28572638|ref|NP_789418.1| hypothetical protein TW489 [Tropheryma whipplei TW08/27]
 gi|46577441|sp|Q83GJ1|RRMF_TROWT RecName: Full=Probable rRNA maturation factor
 gi|46577442|sp|Q83HN7|RRMF_TROW8 RecName: Full=Probable rRNA maturation factor
 gi|28410770|emb|CAD67156.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
 gi|28476291|gb|AAO44380.1| unknown [Tropheryma whipplei str. Twist]
          Length = 171

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEI 113
           L + F  +  +  L  ++ G+++ ++VLSFP    A  S +     +LGDIV+  E +  
Sbjct: 39  LGVSFITAAEMRDLKIKHFGVNEDSDVLSFPIDEIAPGSENSLVYGVLGDIVVCPETVMR 98

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +A  +   FE+ +  L++HGFLHLLG+DH D      M  L+  ++ED 
Sbjct: 99  QA--VRHPFEHEIYLLVVHGFLHLLGFDHSDAPSKKEMFSLQAKLIEDF 145


>gi|327460959|gb|EGF07292.1| metalloprotease [Streptococcus sanguinis SK1057]
          Length = 165

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL------------- 99
           E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L             
Sbjct: 37  EMAVTFVSNARSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEMLEDFD 96

Query: 100 -MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|330893139|gb|EGH25800.1| metal-binding heat shock protein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 69

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 41/53 (77%)

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK  ++H  H++IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 1   GKSVDSHWAHMVIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYAED 53


>gi|217032555|ref|ZP_03438045.1| hypothetical protein HPB128_172g18 [Helicobacter pylori B128]
 gi|298735834|ref|YP_003728359.1| Predicted metal-dependent hydrolase [Helicobacter pylori B8]
 gi|216945760|gb|EEC24384.1| hypothetical protein HPB128_172g18 [Helicobacter pylori B128]
 gi|298355023|emb|CBI65895.1| Predicted metal-dependent hydrolase [Helicobacter pylori B8]
          Length = 140

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + R  D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDLRNCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   EN +  L IHG LHLLGYDH  DK
Sbjct: 81  ENALKLGHSLENEIALLFIHGVLHLLGYDHEKDK 114


>gi|313678249|ref|YP_004055989.1| hypothetical protein MBOVPG45_0124 [Mycoplasma bovis PG45]
 gi|312950195|gb|ADR24790.1| conserved hypothetical protein TIGR00043 [Mycoplasma bovis PG45]
          Length = 152

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 3/115 (2%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-SDGCSSLMLGDIVLAYE 109
           KE  V++S+V  ++ +I+ LN +YR  D  T++LSF     S       L LG++V+++E
Sbjct: 36  KEISVDVSIV--NNRKIKKLNKQYRQKDYATDILSFDFGDKSLYKDMPFLPLGELVISHE 93

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +E +A   G        +L  HG +HL+GYDH  + +   M  +  +I + L I
Sbjct: 94  KVEEQAKEFGHSLRREYCYLYAHGLIHLMGYDHELEDERVAMNMMVDAIFDPLNI 148


>gi|288905824|ref|YP_003431046.1| hypothetical protein GALLO_1631 [Streptococcus gallolyticus UCN34]
 gi|306831913|ref|ZP_07465068.1| probable metalloprotease [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|306834027|ref|ZP_07467148.1| probable metalloprotease [Streptococcus bovis ATCC 700338]
 gi|325978859|ref|YP_004288575.1| putative metalloprotease [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732550|emb|CBI14122.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|304423815|gb|EFM26960.1| probable metalloprotease [Streptococcus bovis ATCC 700338]
 gi|304425839|gb|EFM28956.1| probable metalloprotease [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178787|emb|CBZ48831.1| putative metalloprotease [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 165

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS----------------- 98
           E+++ F  + R   LN EYR  D+PT+V+S      SS   S                  
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPESSLSFSEEDLEENPELAEMLDEFD 96

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLK 163


>gi|325694803|gb|EGD36708.1| metalloprotease [Streptococcus sanguinis SK150]
 gi|332362401|gb|EGJ40201.1| metalloprotease [Streptococcus sanguinis SK1056]
          Length = 165

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCSSL------------- 99
           E+++ F  + R   LN EYR  D+PT+V+S    P    + D    L             
Sbjct: 37  EMAVTFVSNARSHELNLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEMLEDFD 96

Query: 100 -MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  I
Sbjct: 97  AYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLT 163


>gi|295396067|ref|ZP_06806250.1| probable metalloprotease [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971008|gb|EFG46900.1| probable metalloprotease [Brevibacterium mcbrellneri ATCC 49030]
          Length = 159

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 52/105 (49%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VELS+ F     +  L+  + G+   T+V+SFP            MLGDIV++  +   +
Sbjct: 35  VELSIRFISDDVMSELHETWMGLPGTTDVMSFPMDELKPGHDEPGMLGDIVISPTVAAEQ 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G    + +  L +HG LHLLGYDH +      M  L+R +L
Sbjct: 95  AAAAGHSMSDEIYLLTVHGILHLLGYDHGEPDQKSEMFALQRKLL 139


>gi|326532710|dbj|BAJ89200.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 526

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 16/147 (10%)

Query: 11  LDLQIAVENALWGDEI------HLRTLCEVVFAKAVSNLISKGYFVKE---------NIV 55
           L +QI +E AL  D +       LRT        A  NL +  Y  ++         + V
Sbjct: 91  LSVQIGIEEALPDDPLILSIAETLRTDAGKAMKLAFHNLGNSEYKTRDPCISNVDEYDSV 150

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+SL+  D   I  LN E+R  D  T+VLS             L LGD+V++ E    +A
Sbjct: 151 EVSLLLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLQ-IPILQLGDLVISVETARRQA 209

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G    + +  L++HG LHLLG+DH
Sbjct: 210 EERGHALLDEIRILMVHGLLHLLGFDH 236


>gi|320547279|ref|ZP_08041571.1| metalloprotease [Streptococcus equinus ATCC 9812]
 gi|320448083|gb|EFW88834.1| metalloprotease [Streptococcus equinus ATCC 9812]
          Length = 165

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDGCSSLML-------- 101
           E+++ F  + R   LN EYR  D+PT+V+S         +F+  D   +  L        
Sbjct: 37  EMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPESDLSFSEEDLAENPELAEMLDEFD 96

Query: 102 ---GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
              G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEI 156

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 157 LTAYGLK 163


>gi|123169874|sp|Q14NW7|RRMF_SPICI RecName: Full=Probable rRNA maturation factor
 gi|110004475|emb|CAK98812.1| conserved hypothetical upf0054 protein [Spiroplasma citri]
          Length = 158

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 4/115 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM----LGDIVLAYEI 110
           +ELSL+  D+     LN +YR  D   +V++F     +      L     LGDI + YE 
Sbjct: 39  LELSLIIVDAQEQLELNQKYRHKDYVADVITFALEEENKIDLFELTGLRSLGDIFICYEK 98

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +A             L  HG LH+LGYDH    D   M  L+R +L DL IN
Sbjct: 99  ALAQAAEYNHSPRREFAFLFTHGMLHILGYDHQTPADEEKMFNLQRKVLNDLQIN 153


>gi|91202468|emb|CAJ72107.1| hypothetical protein kustd1362 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 144

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R     +  K +  LI +    +     LS+V TD+  I  LN  + G D  T+VLSF  
Sbjct: 8   RQKSYAIDEKRIVKLIKRVLKSENKDASLSIVVTDNKEIRRLNKAFLGHDYATDVLSFIY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                D   + + G+I+++ E+    A     + E  +   +IHG LHL+GY+     DA
Sbjct: 68  -----DASENHVAGEIIVSAEMAYKVAKEHCHDAEGEIALYLIHGLLHLIGYNDKKKGDA 122

Query: 149 CVMEGLERSILEDLGIN 165
            VM   E+ +L  LG N
Sbjct: 123 KVMHRREKELLSKLGYN 139


>gi|219684794|ref|ZP_03539736.1| conserved hypothetical protein [Borrelia garinii PBr]
 gi|219685335|ref|ZP_03540154.1| conserved hypothetical protein [Borrelia garinii Far04]
 gi|219671739|gb|EED28794.1| conserved hypothetical protein [Borrelia garinii PBr]
 gi|219673108|gb|EED30128.1| conserved hypothetical protein [Borrelia garinii Far04]
          Length = 152

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIE 112
           ELS++  D+  I+ LN ++R  ++PT+VLSF     + D   G +  + GDI++++E ++
Sbjct: 38  ELSVILCDNVYIQKLNNKFRNKNEPTDVLSFNYNELNEDLVDGINYKIQGDIIISFEYLK 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
             A     E    L  + IHG LHL+G++H
Sbjct: 98  FSAQEFNVEIYEELQRVTIHGILHLMGHNH 127


>gi|253701857|ref|YP_003023046.1| hypothetical protein GM21_3262 [Geobacter sp. M21]
 gi|251776707|gb|ACT19288.1| protein of unknown function UPF0054 [Geobacter sp. M21]
          Length = 132

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS+       I  +N +Y G DK TNV+SF          +  +LGD+V++ +    E
Sbjct: 17  AELSISIVGDRAIRIINRDYLGRDKATNVISFAMQEGEFGAINPEVLGDVVISVDTAARE 76

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSIL 159
           A   G+ F +    L++HG LH+ GYDH    + +A  ME  ER I 
Sbjct: 77  AEEAGEAFLSRFYFLLMHGILHITGYDHERSGEAEAARMEAKEREIF 123


>gi|54020099|ref|YP_115737.1| hypothetical protein mhp224 [Mycoplasma hyopneumoniae 232]
 gi|71893510|ref|YP_278956.1| hypothetical protein MHJ_0154 [Mycoplasma hyopneumoniae J]
 gi|72080497|ref|YP_287555.1| hypothetical protein MHP7448_0158 [Mycoplasma hyopneumoniae 7448]
 gi|62901248|sp|Q601H8|RRMF_MYCH2 RecName: Full=Probable rRNA maturation factor
 gi|123645188|sp|Q4A8K7|RRMF_MYCH7 RecName: Full=Probable rRNA maturation factor
 gi|123645909|sp|Q4AAH6|RRMF_MYCHJ RecName: Full=Probable rRNA maturation factor
 gi|53987272|gb|AAV27473.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
 gi|71851637|gb|AAZ44245.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
 gi|71913621|gb|AAZ53532.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
          Length = 150

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 3/132 (2%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           +F K    L+ K     E  + L L+     + + L  +++ I+   +VLSFP+    + 
Sbjct: 20  LFRKIFKLLVEKEQITGE--ISLDLMLITQRKAQKLAIKFKNINYIPDVLSFPSNLIIAK 77

Query: 95  GCSSL-MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
               L  LG+I +    I  +AN  G   E    +L +H   HLLG+DH D+K   +M+ 
Sbjct: 78  KNFRLHFLGEIFMTPAKIIKQANEYGHSEEREFSYLFVHSIYHLLGFDHQDEKTNKLMDE 137

Query: 154 LERSILEDLGIN 165
              +IL +LGIN
Sbjct: 138 KVENILINLGIN 149


>gi|258405852|ref|YP_003198594.1| hypothetical protein Dret_1732 [Desulfohalobium retbaense DSM 5692]
 gi|257798079|gb|ACV69016.1| protein of unknown function UPF0054 [Desulfohalobium retbaense DSM
           5692]
          Length = 144

 Score = 57.4 bits (137), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 9/111 (8%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVL 106
           G  +  +   L +  T    I  LN  Y G   PTNVLSFP  +           G +VL
Sbjct: 37  GNILGLSTASLDIRITTDFGIAGLNARYLGCVGPTNVLSFPNEYGG---------GSLVL 87

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             + +  EA +  ++   H V L+ HG LHL G DH    DA     +E++
Sbjct: 88  NAQAVAREAWLYAQDPLEHWVRLVAHGLLHLYGLDHGPAMDAATETAVEQA 138


>gi|326333966|ref|ZP_08200196.1| putative metalloprotease [Nocardioidaceae bacterium Broad-1]
 gi|325948245|gb|EGD40355.1| putative metalloprotease [Nocardioidaceae bacterium Broad-1]
          Length = 154

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 4/113 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEI 110
            +L + F D   I  LN  Y   + PT+VLSFP          +      LGDI++A  I
Sbjct: 35  ADLRIKFGDEATITELNERYFDTEGPTDVLSFPGDELLPGRLDEEPEEGDLGDIIIAPTI 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
              +    G      +  L  HG LHLLGYDHVD  +   M GL+  +L+  G
Sbjct: 95  AAKQGEAAGHGTVAEIELLTTHGILHLLGYDHVDPDEHAEMFGLQAKLLKAWG 147


>gi|312601107|gb|ADQ90362.1| Putative metalloprotease [Mycoplasma hyopneumoniae 168]
          Length = 150

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 3/132 (2%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           +F K    L+ K     E  + L L+     + + L  +++ I+   +VLSFP+    + 
Sbjct: 20  LFRKIFKLLVEKEQITGE--ISLDLMLITQRKAQKLAIKFKSINYIPDVLSFPSNLIIAK 77

Query: 95  GCSSL-MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
               L  LG+I +    I  +AN  G   E    +L +H   HLLG+DH D+K   +M+ 
Sbjct: 78  KNFRLHFLGEIFMTPAKIIKQANEYGHSEEREFSYLFVHSIYHLLGFDHQDEKTNKLMDE 137

Query: 154 LERSILEDLGIN 165
              +IL +LGIN
Sbjct: 138 KVENILINLGIN 149


>gi|124024971|ref|YP_001014087.1| metal-dependent hydrolase [Prochlorococcus marinus str. NATL1A]
 gi|123960039|gb|ABM74822.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           NATL1A]
          Length = 184

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEIIE 112
           L L  T+  +I  LN  + G  K T+VLSFP    T F  S+ C  + LGDIV++     
Sbjct: 74  LGLELTNDKKILDLNHAWLGQSKTTDVLSFPIIDETFFGVSNEC--IELGDIVISVPTAI 131

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +A     +    L  L  HG LHLLG+DH D++    M  ++  +L+  GI
Sbjct: 132 RQAKDNNADLFRELRWLATHGLLHLLGWDHSDEESLNKMLLIQEQLLDIRGI 183


>gi|145572770|sp|A0LK95|RRMF_SYNFM RecName: Full=Probable rRNA maturation factor
          Length = 159

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS++  D   +  LN  YR  D  T+VLSFP            +LGD+V+   + +  
Sbjct: 36  AELSILIVDDEEMAGLNSTYRRKDTSTDVLSFPMREGEFGDVCEEVLGDVVICAPMAKRM 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
             + G  F++ +  L++HG LHL+G+DH
Sbjct: 96  GELHGASFQSVMDLLLVHGILHLVGHDH 123


>gi|254819388|ref|ZP_05224389.1| putative metalloprotease [Mycobacterium intracellulare ATCC 13950]
          Length = 177

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVL 106
            ELS+V  D+  +  L+  +  +  PT+V+SFP           A   G S  MLGDIVL
Sbjct: 35  AELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPS--MLGDIVL 92

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
             E    +A   G    + L  L IHG LHL+GYDH +  +   M  L+  +LE+
Sbjct: 93  CPEFAAGQAAAAGHSLGHELALLTIHGVLHLIGYDHGEPDEEKEMFALQDRLLEE 147


>gi|108760629|ref|YP_632898.1| cupin domain-containing protein [Myxococcus xanthus DK 1622]
 gi|123374295|sp|Q1D375|RRMF_MYXXD RecName: Full=Probable rRNA maturation factor
 gi|108464509|gb|ABF89694.1| cupin domain protein [Myxococcus xanthus DK 1622]
          Length = 294

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 4/139 (2%)

Query: 36  FAKAVSNLISKGYFVKENI--VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           FA+ ++   ++ Y V+  +  VELSL   D   I  LN  +R  DK T+VLSFP      
Sbjct: 147 FARLLTTW-ARAYLVQLELSGVELSLSLVDDRAIRRLNRTWRKKDKATDVLSFPAGDLPK 205

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                  LGD+V++ +  + +A   G+  E+ +   + HG LHLLG+DH   +DA  M  
Sbjct: 206 GTPGPRPLGDVVISLDTAKRQAKEYGRTLESEMARYLAHGLLHLLGHDHERPRDAKRMAA 265

Query: 154 LERSILEDLG-INDPYEVD 171
           LE  +L + G + D  +VD
Sbjct: 266 LEEQLLGERGMVADSLQVD 284


>gi|109947837|ref|YP_665065.1| putative metalloprotease [Helicobacter acinonychis str. Sheeba]
 gi|122973244|sp|Q17WB0|RRMF_HELAH RecName: Full=Probable rRNA maturation factor
 gi|109715058|emb|CAK00066.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 140

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           LV     ++  +N   R  D  T+VLSFP      +      LG +V+   + +  A  L
Sbjct: 32  LVLVSGEKMREINRNLRNCDYATDVLSFPL-----EAIPHTPLGSVVINMSLAQTNALKL 86

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           G   EN +  L IHG LHLLGYDH  D+
Sbjct: 87  GHSLENEIALLFIHGMLHLLGYDHEKDQ 114


>gi|253582281|ref|ZP_04859504.1| metal-binding protein [Fusobacterium varium ATCC 27725]
 gi|251835820|gb|EES64358.1| metal-binding protein [Fusobacterium varium ATCC 27725]
          Length = 155

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIV 105
           F  +  V LSL+FT +  I+ +N +YRG D+PT+V+SF  A+  +   D      LGDIV
Sbjct: 35  FESDRPVYLSLLFTGNEEIQVINKQYRGKDQPTDVISF--AYHETEDFDIGPYDTLGDIV 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           ++ E +E +A       +  L +++ HG LHLLGYDH+++ D   M   E  IL   G
Sbjct: 93  ISMERVEEQAAEYNHSPKRELYYVLTHGLLHLLGYDHIEEDDKKEMRAREEEILGQFG 150


>gi|222622464|gb|EEE56596.1| hypothetical protein OsJ_05956 [Oryza sativa Japonica Group]
          Length = 549

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K + VE+S++  D   I  LN E+R  D  T+VLS        D    L LGDIV++ + 
Sbjct: 161 KYDTVEVSILLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLD-IPILQLGDIVISIDT 219

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
            + +A   G    + +  L++HG LHLLG+DH
Sbjct: 220 AQRQAEERGHTLHDEIRILMVHGLLHLLGFDH 251


>gi|262282706|ref|ZP_06060474.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262261997|gb|EEY80695.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 165

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 19/128 (14%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF------------------PTAFASSDGCS 97
           E+++ F  + R   LN EYR  D+PT+V+S                   P      D   
Sbjct: 37  EMAVTFVTNERSYELNLEYRDTDRPTDVISLEYKPELDIAIDEEDLLNHPELAEMLDDFD 96

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           +  +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  
Sbjct: 97  AY-IGELFISVDKAREQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEE 155

Query: 158 ILEDLGIN 165
           IL   G+ 
Sbjct: 156 ILTAYGLT 163


>gi|188527944|ref|YP_001910631.1| putative metalloprotease [Helicobacter pylori Shi470]
 gi|238691942|sp|B2UUR9|RRMF_HELPS RecName: Full=Probable rRNA maturation factor
 gi|188144184|gb|ACD48601.1| putative metalloprotease [Helicobacter pylori Shi470]
          Length = 140

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
             +EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QTIELVLVSDETMR--EINRDSRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  ESALKLGHRLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|195953789|ref|YP_002122079.1| protein of unknown function UPF0054 [Hydrogenobaculum sp. Y04AAS1]
 gi|195933401|gb|ACG58101.1| protein of unknown function UPF0054 [Hydrogenobaculum sp. Y04AAS1]
          Length = 144

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 10/125 (8%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISK------GYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           ++I+L+T  ++   K +  L+ K       +F  +N + L +  T+   I+ LN  YR  
Sbjct: 2   NKINLKTYKKLEIPKELKYLLKKRASYTLKFFGFKNSM-LDIYITNDEEIKHLNSAYRQK 60

Query: 78  DKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           DKPT+VLSF     + +  +   LG+IV++Y+    +A   G   +  L  L++HG +HL
Sbjct: 61  DKPTDVLSFNI---NENVGNVYYLGEIVISYDTALKQAIEYGVSLDQELTRLLVHGIVHL 117

Query: 138 LGYDH 142
           +G+DH
Sbjct: 118 MGHDH 122


>gi|221120368|ref|XP_002165737.1| PREDICTED: similar to Putative metalloprotease C21orf57 [Hydra
           magnipapillata]
          Length = 159

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------LGDIVLAYE 109
           ++ L+F   +++  LN+ +R ID+ T++LSFP   + ++   S M      LGDI L  +
Sbjct: 36  DVGLLFLSKNKMRELNYAHRKIDEATDILSFPFHQSLTNADISKMNLEEKNLGDIFLCPQ 95

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           +I  + +V   E  +  V L+ HG +HL GY H  ++   +M   E  IL+
Sbjct: 96  LIRRKYDVHDFELRSVFVPLLTHGLVHLCGYAHETEEQYELMHAKELEILK 146


>gi|297822029|ref|XP_002878897.1| hypothetical protein ARALYDRAFT_901259 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324736|gb|EFH55156.1| hypothetical protein ARALYDRAFT_901259 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 584

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VELS++  +   I  LN E+RG D  T+VLS  +          LM+GDIV++ E    +
Sbjct: 164 VELSVMLCNDDFICKLNKEWRGEDHATDVLSM-SQHVPELKLPVLMMGDIVISVETAARQ 222

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A   G    + +  L+IHG LHLLG+DH
Sbjct: 223 AAERGHTLLDEIRILVIHGLLHLLGFDH 250


>gi|222056179|ref|YP_002538541.1| protein of unknown function UPF0054 [Geobacter sp. FRC-32]
 gi|221565468|gb|ACM21440.1| protein of unknown function UPF0054 [Geobacter sp. FRC-32]
          Length = 126

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+       I  +N +Y   DK TNV+SF          +  MLGD+++  +    EA
Sbjct: 12  ELSISIVGDRTIRRINRDYLDRDKTTNVISFAMHEGDFSEINPQMLGDVIICADTASREA 71

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSILEDL 162
                 F + L  L++HG LH+ GYDH    + +A  ME  ER I  +L
Sbjct: 72  EEGDMPFFSRLSFLLLHGILHITGYDHERSGETEAARMEFREREIFGNL 120


>gi|154174537|ref|YP_001407912.1| putative metalloprotease [Campylobacter curvus 525.92]
 gi|112803387|gb|EAU00731.1| conserved hypothetical protein [Campylobacter curvus 525.92]
          Length = 135

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 16/131 (12%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           LCE  + + +  + +   F+    +ELS  F +S  +  +N + RG DK T+VLSFP   
Sbjct: 3   LCEEKYPEILDEICA---FLTPGDIELS--FVNSEEMREINLKERGFDKTTDVLSFPLEL 57

Query: 91  A--SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
              +  GC       IV+  +++  +A  LG   ++    L IHG LH+LG+DH  +KD+
Sbjct: 58  VLHAPIGC-------IVINTDLVMQKAAQLGHTNDDETALLFIHGLLHVLGFDH--EKDS 108

Query: 149 CVMEGLERSIL 159
             M   E  I+
Sbjct: 109 GQMREKEVQII 119


>gi|331703461|ref|YP_004400148.1| hypothetical protein MLC_4420 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|256384128|gb|ACU78698.1| putative metalloprotease [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384960|gb|ACU79529.1| putative metalloprotease [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296456005|gb|ADH22240.1| putative metalloprotease [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
 gi|328802016|emb|CBW54170.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 164

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 36  FAKAVSNLISK---GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           F K   N I K    YF     +ELS+ F +  + + +N +YR      +V SFP     
Sbjct: 16  FWKKFCNKILKTAYNYFNFNYDIELSITFVNDLKAQQINQQYRNHSYIADVTSFPVEMTE 75

Query: 93  SD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           ++        LGD+ +     + +A     +  + +  L +HGFLHLLGYDH D  D  +
Sbjct: 76  NEIKAIGFRELGDMFINLSEAKRKAIKYNHDLNSEMGFLFVHGFLHLLGYDHEDLNDEKI 135

Query: 151 MEGLERSILE 160
           M  L+  IL+
Sbjct: 136 MFDLQDQILK 145


>gi|156391269|ref|XP_001635691.1| predicted protein [Nematostella vectensis]
 gi|156222787|gb|EDO43628.1| predicted protein [Nematostella vectensis]
          Length = 169

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-------SSLML 101
            +K +  ++S+V     RI++LN +YR  +  T+VL+FP       G            L
Sbjct: 29  LLKADRFDVSIVCAGGKRIKSLNLKYRRRNVQTDVLAFPYFENMKPGVLPNPKLQDDWNL 88

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           GD++L   +I  +     K  + +L  LI HG  HLLGY H  +++   M   E+ +L
Sbjct: 89  GDVILGMPVIHQDCQEDNKSVQEYLPVLITHGLCHLLGYTHDTEQNLQQMHKKEKEVL 146


>gi|157150959|ref|YP_001450012.1| putative metalloprotease [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189040587|sp|A8AW52|RRMF_STRGC RecName: Full=Probable rRNA maturation factor
 gi|157075753|gb|ABV10436.1| conserved hypothetical protein TIGR00043 [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 165

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 26/170 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I  E  L  +EI  +T   + FA   +    K         E+++ F  + R   LN 
Sbjct: 3   IEIVDETGLVSEEIIKQTQDILEFAAQKTGKEKK---------EMAVTFVTNERSHELNL 53

Query: 73  EYRGIDKPTNVLSF---PTAFASSDGCSSL--------------MLGDIVLAYEIIEIEA 115
           EYR  D+PT+V+S    P    + D    L               +G++ ++ +    +A
Sbjct: 54  EYRDTDRPTDVISLEYKPELDIAVDEEDLLNHPELAEMLDDFDAYIGELFISVDKAREQA 113

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G  F+  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 114 EEYGHSFKREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|325996428|gb|ADZ51833.1| metal-dependent hydrolase [Helicobacter pylori 2018]
 gi|325998017|gb|ADZ50225.1| putative metalloprotease [Helicobacter pylori 2017]
          Length = 141

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVL 106
            +     I+EL LV  ++ R   +N + R  D  T+VLSFP      +      LG +V+
Sbjct: 22  SFLAPTQIIELVLVSDETMR--EINRDLRDCDYATDVLSFPL-----EAIPHTPLGSVVI 74

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
              + +  A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 75  NAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|83319995|ref|YP_424481.1| hypothetical protein MCAP_0508 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|123535679|sp|Q2SRY2|RRMF_MYCCT RecName: Full=Probable rRNA maturation factor
 gi|83283881|gb|ABC01813.1| conserved hypothetical protein, TIGR00043 [Mycoplasma capricolum
           subsp. capricolum ATCC 27343]
          Length = 164

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 2/119 (1%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--GCSSLML 101
           I+  YF     +ELS+ F D  + + +N +YR      +V SFP     ++        L
Sbjct: 27  IAYNYFNFNYDIELSITFVDDLKAQQINQQYRNHSYIADVTSFPVEMTENEIKAIGFREL 86

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           GD+ +     + +A     +  + +  L +HGFLHLLGYDH +  D  +M  L+  IL+
Sbjct: 87  GDMFINLSEAKRKAIKYNHDLNSEMGFLFVHGFLHLLGYDHENLDDEKIMFDLQDQILK 145


>gi|311031636|ref|ZP_07709726.1| putative metalloprotease [Bacillus sp. m3-13]
          Length = 157

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 20/167 (11%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           + +  LD    + +  W D   +R L  ++FA A    I  G        ELS+ F D+ 
Sbjct: 2   IEIDMLDETTKLTDEQWDD---IRNL--LIFA-AEKESIQPG-------AELSVTFVDND 48

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVL 118
           RI+ +N EYR  D+PT+V+SF              D  +  MLGDI+++    E +A   
Sbjct: 49  RIQEINREYREKDRPTDVISFAMEELGEGEIEIHYDEEAPRMLGDIIISIPKAEEQAEEY 108

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G   +  L  L +HG LHLLGYDH ++ D  +M   ++ IL+  G+ 
Sbjct: 109 GHSVKRELGFLALHGLLHLLGYDHENETDEKIMFDKQKEILDAYGLT 155


>gi|217077477|ref|YP_002335195.1| hypothetical protein THA_1410 [Thermosipho africanus TCF52B]
 gi|226734149|sp|B7ICX7|RRMF_THEAB RecName: Full=Probable rRNA maturation factor
 gi|217037332|gb|ACJ75854.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
          Length = 134

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 7/88 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           V ++LVF D   IE LN +YR I+ PT+VL+F   +   D     +  +I +  ++I+  
Sbjct: 28  VNVNLVFIDKGEIERLNNQYRNINAPTDVLTF--VYGDDD-----LYAEIFVCEDVIKEN 80

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A      FE  L+ ++IH  LH+ GYDH
Sbjct: 81  AEKFYNTFEKELLTVLIHAALHVAGYDH 108


>gi|307637831|gb|ADN80281.1| metal-dependent hydrolase [Helicobacter pylori 908]
          Length = 141

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVL 106
            +     I+EL LV  ++ R   +N + R  D  T+VLSFP      +      LG +V+
Sbjct: 22  SFLAPTQIIELVLVSDETMR--EINRDLRDCDYATDVLSFPL-----EAIPHTPLGSVVI 74

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
              + +  A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 75  NAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|72161249|ref|YP_288906.1| metalloprotease [Thermobifida fusca YX]
 gi|123760864|sp|Q47RN4|RRMF_THEFY RecName: Full=Probable rRNA maturation factor
 gi|71914981|gb|AAZ54883.1| Protein of unknown function UPF0054 [Thermobifida fusca YX]
          Length = 155

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYE 109
           + ELS++  D   +  L+  +     PT+VLSFP       A        +LGD+V+  +
Sbjct: 34  LAELSVLLVDEEPMADLHVRWMNEPGPTDVLSFPMDELRPGAPGRTSEPGILGDVVICPQ 93

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   +A   G   ++ +  L  HG LHLLGYDH +  +   M  L+  +L
Sbjct: 94  VAARQAERAGHSMQDEIDLLCTHGILHLLGYDHAEPDEHREMFSLQNELL 143


>gi|22537644|ref|NP_688495.1| metalloprotease [Streptococcus agalactiae 2603V/R]
 gi|76788021|ref|YP_330133.1| metalloprotease [Streptococcus agalactiae A909]
 gi|22534530|gb|AAN00368.1|AE014260_24 conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           2603V/R]
 gi|76563078|gb|ABA45662.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           A909]
          Length = 161

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLML--- 101
           KEN  E+++ F  + R   LN EYR  D+PT+V+S         +F   D   +  L   
Sbjct: 29  KEN-KEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEVDISFDEEDLAENPELAEM 87

Query: 102 --------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                   G++ ++ +  + +A   G  +E  +  L +HGFLH+ GYDH   ++   M  
Sbjct: 88  LEDFDSYIGELFISIDKAKEQAEEYGHSYEREMGFLAVHGFLHINGYDHYTPEEEKEMFS 147

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 148 LQEEILTAYGLK 159


>gi|25011603|ref|NP_735998.1| metalloprotease [Streptococcus agalactiae NEM316]
 gi|77408558|ref|ZP_00785294.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           COH1]
 gi|77413993|ref|ZP_00790166.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           515]
 gi|54040165|sp|P67139|RRMF_STRA5 RecName: Full=Probable rRNA maturation factor
 gi|54042634|sp|P67138|RRMF_STRA3 RecName: Full=Probable rRNA maturation factor
 gi|145572758|sp|Q3K020|RRMF_STRA1 RecName: Full=Probable rRNA maturation factor
 gi|24413143|emb|CAD47221.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77159973|gb|EAO71111.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           515]
 gi|77172832|gb|EAO75965.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           COH1]
          Length = 165

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLML--- 101
           KEN  E+++ F  + R   LN EYR  D+PT+V+S         +F   D   +  L   
Sbjct: 33  KEN-KEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEVDISFDEEDLAENPELAEM 91

Query: 102 --------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                   G++ ++ +  + +A   G  +E  +  L +HGFLH+ GYDH   ++   M  
Sbjct: 92  LEDFDSYIGELFISIDKAKEQAEEYGHSYEREMGFLAVHGFLHINGYDHYTPEEEKEMFS 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLK 163


>gi|257055401|ref|YP_003133233.1| putative metalloprotease [Saccharomonospora viridis DSM 43017]
 gi|256585273|gb|ACU96406.1| conserved hypothetical protein TIGR00043 [Saccharomonospora viridis
           DSM 43017]
          Length = 183

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 11/132 (8%)

Query: 41  SNLISKGYFVKEN-----IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------A 89
           ++++S   F  +      + ELS+V      +E L+  +  +  PT+V++FP        
Sbjct: 16  ASIVSAARFALDRMEVSPLAELSIVLVTLDVMEDLHERWMDLPGPTDVMAFPMDELEVGR 75

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
              +   S  +LGDIVL     + +A   G    + L  L +HG LHLLGYDH + ++  
Sbjct: 76  RPDAAEPSPALLGDIVLCPAFAKDQARKAGHSLLDELHLLTVHGVLHLLGYDHAEPEEER 135

Query: 150 VMEGLERSILED 161
            M  L+  IL D
Sbjct: 136 EMFALQNRILAD 147


>gi|221194510|ref|ZP_03567567.1| putative metalloprotease [Atopobium rimae ATCC 49626]
 gi|221185414|gb|EEE17804.1| putative metalloprotease [Atopobium rimae ATCC 49626]
          Length = 169

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 11/131 (8%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA------FASSDGC 96
           ++++   V+  +V +S+V      I T+N  +R  D  T+V+S           A  + C
Sbjct: 29  VLAQEKVVRPCMVSISVV--SDEEIRTVNRTWRNADAVTDVISLEVERPNDEDLAPGEPC 86

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LGDI+LA   I+ +A        +    +++H  LHLLGYDH++D++A  ME  E 
Sbjct: 87  E---LGDILLAPAYIKRQAATYHTTPADEFRLMLVHAMLHLLGYDHLNDEEAECMEARED 143

Query: 157 SILEDLGINDP 167
           +++  +  ++P
Sbjct: 144 ALVAMIKTDNP 154


>gi|77405165|ref|ZP_00782263.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           H36B]
 gi|77411675|ref|ZP_00788014.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           CJB111]
 gi|77162247|gb|EAO73219.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           CJB111]
 gi|77176167|gb|EAO78938.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           H36B]
 gi|319745495|gb|EFV97799.1| metalloprotease [Streptococcus agalactiae ATCC 13813]
          Length = 165

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLML--- 101
           KEN  E+++ F  + R   LN EYR  D+PT+V+S         +F   D   +  L   
Sbjct: 33  KEN-KEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEVDISFDEEDLTENPELAEM 91

Query: 102 --------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                   G++ ++ +  + +A   G  +E  +  L +HGFLH+ GYDH   ++   M  
Sbjct: 92  LEDFDSYIGELFISIDKAKEQAEEYGHSYEREMGFLAVHGFLHINGYDHYTPEEEKEMFS 151

Query: 154 LERSILEDLGIN 165
           L+  IL   G+ 
Sbjct: 152 LQEEILTAYGLK 163


>gi|203283986|ref|YP_002221726.1| hypothetical protein BDU_64 [Borrelia duttonii Ly]
 gi|226701634|sp|B5RKV9|RRMF_BORDL RecName: Full=Probable rRNA maturation factor
 gi|201083429|gb|ACH93020.1| uncharacterized conserved protein [Borrelia duttonii Ly]
          Length = 148

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS++  ++  I+ LN E+R   +PT+VLSF   F  S+  +  + GDI+++ E +E  +
Sbjct: 38  ELSVILCNNEYIQKLNGEFRQKPEPTDVLSF-NYFEGSEQINHKIQGDIIISLEYLEFSS 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
                E    L    IHG LHL+GY H
Sbjct: 97  LEFNVEMYEELQRNTIHGILHLIGYTH 123


>gi|308063942|gb|ADO05829.1| putative metalloprotease [Helicobacter pylori Sat464]
          Length = 140

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
             +EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QTIELVLVSDETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E  +  L IHG LHLLGYDH  DK
Sbjct: 81  ESALKLGHSLEEEIALLFIHGVLHLLGYDHEKDK 114


>gi|294155405|ref|YP_003559789.1| conserved hypothetical metalloprotease [Mycoplasma crocodyli MP145]
 gi|291600021|gb|ADE19517.1| conserved hypothetical metalloprotease [Mycoplasma crocodyli MP145]
          Length = 158

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 7/132 (5%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           + + + NL+ K + +K++I ++ + F D+ +I+ LN  YR  D  T++LSF   F   D 
Sbjct: 26  YQEILKNLV-KHFNIKKDI-QVDVTFVDNKKIKELNKSYRNKDYVTDILSFD--FGKIDF 81

Query: 96  CSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
            S +    LG++V++ + +E ++       +    +L  HG +HL+GYDH  + +   M 
Sbjct: 82  NSKIPFIHLGELVISSQKVEEQSQEFNHSLKREYCYLFAHGLIHLMGYDHELEDERIEMN 141

Query: 153 GLERSILEDLGI 164
            L  +I   L I
Sbjct: 142 KLVDTIFSPLNI 153


>gi|254423789|ref|ZP_05037507.1| conserved hypothetical protein TIGR00043, putative [Synechococcus
           sp. PCC 7335]
 gi|196191278|gb|EDX86242.1| conserved hypothetical protein TIGR00043, putative [Synechococcus
           sp. PCC 7335]
          Length = 166

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDGCSSLMLGDIVLAYE 109
           E+SL  T    I+ LN ++R  +KPT+VLSF           +      + LGDI+++ E
Sbjct: 53  EVSLRLTSDAEIQQLNSDFRQQEKPTDVLSFAALETEIPQLQNVYQQQPVYLGDIIVSIE 112

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
               +A       E  L  L  HG LHLLG+DH ++     M  L+R  L
Sbjct: 113 TASRQAVENRHSLERELAWLCAHGLLHLLGWDHPNEDRLTQM--LDRQAL 160


>gi|184200942|ref|YP_001855149.1| hypothetical protein KRH_12960 [Kocuria rhizophila DC2201]
 gi|183581172|dbj|BAG29643.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 168

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEII 111
            E+S+   D  R+  L+ ++  +   T+V+SFP       + +  S  +LGD+VL   + 
Sbjct: 47  TEVSIAVVDEERMTQLHEQWLDLPGATDVMSFPMDELREGTPERPSLGVLGDVVLCPPVA 106

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
             +A   G   ++ L  L  H  LHLLG+DH ++ +   M   +R +LE+ LG + P E 
Sbjct: 107 ARQAAAAGHSTQDELCLLTAHSLLHLLGHDHAEEHERARMFAAQRGLLEEFLGRDAPVET 166


>gi|152967330|ref|YP_001363114.1| metalloprotease [Kineococcus radiotolerans SRS30216]
 gi|189040137|sp|A6WDG1|RRMF_KINRD RecName: Full=Probable rRNA maturation factor
 gi|151361847|gb|ABS04850.1| protein of unknown function UPF0054 [Kineococcus radiotolerans
           SRS30216]
          Length = 173

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--TAFASSDGCSSL--MLGDIVLAYE 109
           + ELS++  D   +  L+ ++     PT+V+SFP        +G +S   +LGD+V+  +
Sbjct: 38  LAELSVLMVDVEAMARLHVQWMDEPGPTDVMSFPMDQLRPGREGRTSEPGLLGDVVVCPQ 97

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   +A   G    + ++ L+ HG LHLLGYDH +  +   M  L+R ++
Sbjct: 98  VAAEQAKASGHATADEVLLLVAHGILHLLGYDHAEPDEEREMFTLQRRLV 147


>gi|284044304|ref|YP_003394644.1| hypothetical protein Cwoe_2850 [Conexibacter woesei DSM 14684]
 gi|283948525|gb|ADB51269.1| protein of unknown function UPF0054 [Conexibacter woesei DSM 14684]
          Length = 138

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 19/128 (14%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           I +  LC + F+ A    I +G+        +++ F D+  I+TLN ++RG D PT+VLS
Sbjct: 20  IDVEELCGLAFSSAG---IEEGH--------VAVAFVDAETIQTLNRDHRGRDAPTDVLS 68

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VD 144
           FP      DG     L  I  A    E+   V+       L   ++HG LHL G DH VD
Sbjct: 69  FPI-----DGIDGEALRQIPAAQR--ELGDVVICPPHTEDLSEAVVHGALHLTGMDHEVD 121

Query: 145 DKDACVME 152
           D +   ++
Sbjct: 122 DGEMLALQ 129


>gi|317014546|gb|ADU81982.1| metal-binding heat shock protein [Helicobacter pylori Gambia94/24]
          Length = 141

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVL 106
            +     I+EL LV  ++ R   +N + R  D  T+VLSFP      +      LG +V+
Sbjct: 22  NFLAPTQIIELVLVSDETMR--EINRDLRDCDYATDVLSFPL-----EAIPHTPLGSVVI 74

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
              + +  A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 75  NAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|325181482|emb|CCA15916.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 165

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 15/149 (10%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
             L+G  +HL+TL + V A        K  +      +LS++ T   ++  LN ++R  D
Sbjct: 13  RPLYG--LHLKTLNDQVRAMVECMNCPKYPW------DLSVILTTDQQLHRLNKQFRKQD 64

Query: 79  KPTNVLSFPT-------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
           K T++LSFP+        F +        LGDI ++   ++   +  G +    +  L  
Sbjct: 65  KTTDILSFPSHNINQPGRFPNVRTPEDRYLGDIYISLPYVKKYCDEEGTDINEQMRVLFA 124

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILE 160
           HG  HL+GYDH  D++   M   E  +L 
Sbjct: 125 HGICHLMGYDHETDQEHERMAKAEDYLLR 153


>gi|226492765|ref|NP_001146569.1| hypothetical protein LOC100280165 [Zea mays]
 gi|219887855|gb|ACL54302.1| unknown [Zea mays]
          Length = 313

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K + VE+S++  + + I+ LN E+R +D  T++LS        D    LMLGDIV++ E 
Sbjct: 173 KYDKVEVSVLLCNDNFIQDLNKEWRDVDCATDILSMSQYIPDLD-VPILMLGDIVISVEA 231

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
            E +A   G    + +  L++ G LHLLG+ H
Sbjct: 232 AERQAGEKGVTLLDEVRVLVVRGILHLLGFQH 263


>gi|258651805|ref|YP_003200961.1| hypothetical protein Namu_1577 [Nakamurella multipartita DSM 44233]
 gi|258555030|gb|ACV77972.1| protein of unknown function UPF0054 [Nakamurella multipartita DSM
           44233]
          Length = 186

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 16/156 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +  DEI L ++   V  +   N ++          ELS++  D   +  L
Sbjct: 1   MTIEVANESGVPVDEIVLVSVARYVLDRMRINPLA----------ELSILLVDVEAMTEL 50

Query: 71  NFEYRGIDKPTNVLSFP-----TAFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + ++     PT+V+SFP     TA    + G    +LGD+VL   +   +A   G   ++
Sbjct: 51  HVKWMDEPGPTDVMSFPMDELDTARRPDESGPGPALLGDVVLCPAVAAEQATAAGHSVQD 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            L  L +HG LHLLGYDH +      M  L+  +L+
Sbjct: 111 ELHLLTVHGVLHLLGYDHAEPAQEREMFRLQNELLD 146


>gi|256375388|ref|YP_003099048.1| metalloprotease [Actinosynnema mirum DSM 43827]
 gi|255919691|gb|ACU35202.1| protein of unknown function UPF0054 [Actinosynnema mirum DSM 43827]
          Length = 187

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP------TAFASSDGCSSLMLGDIVLA 107
           + ELS++  +   +  L+  +  +  PT+V++FP           + G    +LGDIVL 
Sbjct: 34  LAELSVLLVELDVMADLHQRWMDLPGPTDVMAFPMDELDSARRPDAAGLGPALLGDIVLC 93

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
               E +A   G    + L  L +HG LHLLGYDH +  +   M  L+  IL D
Sbjct: 94  PAFAEDQAAKAGHSLMDELHLLTVHGVLHLLGYDHAEPAEEREMFTLQNRILGD 147


>gi|237756142|ref|ZP_04584714.1| putative metalloprotease [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691706|gb|EEP60742.1| putative metalloprotease [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 111

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           N VE+S+  TD+ RI  +N E+RG DKPT+VLSFP     + G    +LGD++++    +
Sbjct: 40  NNVEISITLTDNERIRKINKEWRGKDKPTDVLSFPQ--DETIGYKYRLLGDVIISLPYAK 97

Query: 113 IEANVLG 119
            +A  +G
Sbjct: 98  AQAEEIG 104


>gi|317011357|gb|ADU85104.1| putative metalloprotease [Helicobacter pylori SouthAfrica7]
          Length = 140

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            +VEL LV  ++ R   +N + R  D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QVVELVLVSNETMR--GINRDLRNCDYATDVLSFPL-----EAIPHTPLGSVVINVPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  D+
Sbjct: 81  ANALKLGHSLESEIALLFIHGMLHLLGYDHEKDQ 114


>gi|30682927|ref|NP_850072.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis
           thaliana]
 gi|20466676|gb|AAM20655.1| unknown protein [Arabidopsis thaliana]
 gi|26452541|dbj|BAC43355.1| unknown protein [Arabidopsis thaliana]
 gi|133778884|gb|ABO38782.1| At2g25870 [Arabidopsis thaliana]
 gi|330252671|gb|AEC07765.1| haloacid dehalogenase-like hydrolase domain-containing protein
           [Arabidopsis thaliana]
          Length = 584

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VELS++  +   I  LN E+RG D  T+VLS  +          LM+GD+V++ E    +
Sbjct: 164 VELSVMLCNDDFICKLNKEWRGEDHATDVLSM-SQHVPELKLPVLMMGDLVISVETAARQ 222

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A   G    + +  L+IHG LHLLG+DH
Sbjct: 223 AAERGHTLLDEIRILVIHGLLHLLGFDH 250


>gi|120602327|ref|YP_966727.1| hypothetical protein Dvul_1281 [Desulfovibrio vulgaris DP4]
 gi|120562556|gb|ABM28300.1| protein of unknown function UPF0054 [Desulfovibrio vulgaris DP4]
          Length = 162

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
            A W   I LR L  V  A   +  + +G+       E+ L   D   I  +N E  G  
Sbjct: 11  RAAWRLPIALRDLSGVFAAMQCATGL-EGF-------EVELTIADDALIAMINEEQLGCI 62

Query: 79  KPTNVLSFPT-------------AFASSDGCSSL-MLGDIVLAYEIIEIEANVLGKEFEN 124
            PTN+LSFP                   D  +SL +LG +VL+ + +  EA + G+  + 
Sbjct: 63  GPTNILSFPAYGDPPDYPADGMECGTGQDAHTSLPLLGSLVLSVDTLRREAFLYGQPVQE 122

Query: 125 HLVHLIIHGFLHLLGYDH 142
           H + L+ HG  H+ GYDH
Sbjct: 123 HCLRLLAHGLGHIAGYDH 140


>gi|46580292|ref|YP_011100.1| hypothetical protein DVU1883 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|62901440|sp|Q72AV7|RRMF_DESVH RecName: Full=Probable rRNA maturation factor
 gi|46449709|gb|AAS96359.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233726|gb|ADP86580.1| protein of unknown function UPF0054 [Desulfovibrio vulgaris RCH1]
          Length = 162

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
            A W   I LR +  V  A   +  + +G+       E+ L   D   I  +N E  G  
Sbjct: 11  RAAWRLPIALRDISGVFAAMQCATGL-EGF-------EVELTIADDALIAMINEEQLGCI 62

Query: 79  KPTNVLSFPTAFASSD------GCSS--------LMLGDIVLAYEIIEIEANVLGKEFEN 124
            PTN+LSFP   A  D       C +         +LG +VL+ + +  EA + G+  + 
Sbjct: 63  GPTNILSFPAYGAPPDYPADGMECGTGQDAHTSLPLLGSLVLSVDTLRREAFLYGQPVQE 122

Query: 125 HLVHLIIHGFLHLLGYDH 142
           H + L+ HG  H+ GYDH
Sbjct: 123 HCLRLLAHGLGHIAGYDH 140


>gi|258593723|emb|CBE70064.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 146

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 55/103 (53%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E  LV      I  LN +YRG    T+VLSFP    S    S  +LGD+V++ E  + +
Sbjct: 33  AECGLVLVGDRTIARLNRQYRGKATSTDVLSFPMREGSFASLSPHLLGDVVISAETADRQ 92

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           A   G+   + L  L+IHG LHLLGYDH    +A  M+ LER 
Sbjct: 93  AKAAGRTLRDELTALLIHGILHLLGYDHQMPSEARRMKRLERQ 135


>gi|224418521|ref|ZP_03656527.1| putative metalloprotease [Helicobacter canadensis MIT 98-5491]
 gi|253826924|ref|ZP_04869809.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313142048|ref|ZP_07804241.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510330|gb|EES88989.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131079|gb|EFR48696.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 152

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 5/91 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +  L+  D+  I+ LN  +R  DKPT+VLSFP     SD   S +LG IV++ + I+  +
Sbjct: 40  QCELLLVDNPTIQNLNKIHRNKDKPTDVLSFP---LESD--FSPLLGSIVISLDFIKQNS 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                   + +  L IHG LHLLG+DH  D+
Sbjct: 95  EKYHHTPNDEMALLFIHGILHLLGFDHEKDR 125


>gi|94985374|ref|YP_604738.1| hypothetical protein Dgeo_1273 [Deinococcus geothermalis DSM 11300]
 gi|145572754|sp|Q1IYW5|RRMF_DEIGD RecName: Full=Probable rRNA maturation factor
 gi|94555655|gb|ABF45569.1| Predicted metal-dependent hydrolase, UPF0054 [Deinococcus
           geothermalis DSM 11300]
          Length = 155

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++V      I  L  E+ G D PT+VLSFPT +   D      LGDI+++ +    +A
Sbjct: 35  EVTVVLVGDRTIRALKREHWGEDAPTDVLSFPT-WEPGDPFMPPHLGDIIISLDTAGRQA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G      +  L  HG  HL+G+DH
Sbjct: 94  AARGHSLTREVALLASHGLTHLVGHDH 120


>gi|183221474|ref|YP_001839470.1| hypothetical protein LEPBI_I2092 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911561|ref|YP_001963116.1| metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|189039442|sp|B0SB32|RRMF_LEPBA RecName: Full=Probable rRNA maturation factor
 gi|238687827|sp|B0SSV4|RRMF_LEPBP RecName: Full=Probable rRNA maturation factor
 gi|167776237|gb|ABZ94538.1| Metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779896|gb|ABZ98194.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 154

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 2/107 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           +ELS+   +   +  +N E RG    T+VLSFP  ++        +LG++V++ E  + +
Sbjct: 44  LELSIYLVNDSLMAEINEERRGKPATTDVLSFPL-YSEHPPIPVQILGEVVISMETCKKQ 102

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILE 160
           A  +G    +    L++HG LH  GYDH  +++DA +M  +E   L+
Sbjct: 103 AMEIGHGLVDEFYRLLVHGILHNFGYDHETNEEDALLMRKMEDECLD 149


>gi|125624293|ref|YP_001032776.1| putative metalloprotease [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166231388|sp|A2RL98|RRMF_LACLM RecName: Full=Probable rRNA maturation factor
 gi|124493101|emb|CAL98065.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071075|gb|ADJ60475.1| putative metalloprotease [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 162

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 15/143 (10%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-- 94
            K V    +K   +KE+  E+S+ F D+ R   LN +YR  D+PT+V+S       S+  
Sbjct: 20  TKEVLAFAAKKLDLKES-TEMSVTFVDNARSHELNLQYRETDRPTDVISLEYKPDESEFF 78

Query: 95  ------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                             +G++ ++ +    +A   G   E     L +HGFLH+ GYDH
Sbjct: 79  FDEDMELPEELLEEMDPFIGELFISIDKAAEQAADYGHSIEREYGWLAVHGFLHINGYDH 138

Query: 143 VDDKDACVMEGLERSILEDLGIN 165
              ++   M  L+  IL   G+ 
Sbjct: 139 YTPEEESEMFALQEEILTAYGLT 161


>gi|332704887|ref|ZP_08424975.1| metalloprotease ybeY [Desulfovibrio africanus str. Walvis Bay]
 gi|332555036|gb|EGJ52080.1| metalloprotease ybeY [Desulfovibrio africanus str. Walvis Bay]
          Length = 157

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 12/109 (11%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------------SSLMLGDIVL 106
           L   D   I   N  + G   PTNVLSFP     ++                  LG+IVL
Sbjct: 44  LHLVDDADIARRNAAFMGCVGPTNVLSFPAGSGDTEETDVADVADVFEEGQDHWLGEIVL 103

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           + + +E EA + G++   HLV L+ H  LHL G+DH +  DA   + +E
Sbjct: 104 SVDTLEREAFLYGQQPREHLVRLLAHAVLHLAGHDHGEIMDALTEQAVE 152


>gi|325284047|ref|YP_004256588.1| metalloprotease ybeY [Deinococcus proteolyticus MRP]
 gi|324315856|gb|ADY26971.1| metalloprotease ybeY [Deinococcus proteolyticus MRP]
          Length = 155

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++V  D   I+ L  E+ G D  T+VLSFP A+   D      LGDI+++ +    +A
Sbjct: 35  EVTVVLVDDDTIQALKLEHWGEDAATDVLSFP-AWEPGDPFMPPHLGDIIISLDTAARQA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G      +  L  HG  HL+G+DH
Sbjct: 94  EARGHSLTREVALLASHGMTHLVGHDH 120


>gi|84496851|ref|ZP_00995705.1| hypothetical protein JNB_04990 [Janibacter sp. HTCC2649]
 gi|84383619|gb|EAP99500.1| hypothetical protein JNB_04990 [Janibacter sp. HTCC2649]
          Length = 155

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            +L L   D   +ETL+ ++  +  PT+V+SFP       +  D     +LGDIVL   +
Sbjct: 35  ADLCLRLVDEAAMETLHVQWMDLPGPTDVMSFPMDELRPGSDDDDPEEGVLGDIVLCPSV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            + +A   G   E  L+ L  HG LHLLGYDH + ++   M  L+R +L
Sbjct: 95  AQKQAAEAGHATEEELLLLTTHGILHLLGYDHAEPEEEREMFELQRQLL 143


>gi|72074176|ref|XP_793533.1| PREDICTED: similar to C21orf57 isoform A protein
           [Strongylocentrotus purpuratus]
 gi|115973189|ref|XP_001180108.1| PREDICTED: similar to C21orf57 isoform A protein
           [Strongylocentrotus purpuratus]
          Length = 182

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----AFASSDGCSSLM-LGDIVLAYE 109
           ++S++  +   I  +N  YR  D+PT+VLSFP           D  S L  LGD+ L   
Sbjct: 36  DVSVICVEDKDIRQMNKIYRATDEPTDVLSFPAHENLKPGRLPDPWSDLADLGDMFLGMG 95

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            IE +      + ++ L  +I HG  HL+GYDH   +   +M   E  ILE
Sbjct: 96  YIERDCTKHNADIDDVLPVIITHGLCHLIGYDHKTQEQWKMMHDRELQILE 146


>gi|257791393|ref|YP_003181999.1| hypothetical protein Elen_1642 [Eggerthella lenta DSM 2243]
 gi|317490531|ref|ZP_07949009.1| hypothetical protein HMPREF1023_02709 [Eggerthella sp. 1_3_56FAA]
 gi|325831379|ref|ZP_08164633.1| translation metalloprotein YbeY [Eggerthella sp. HGA1]
 gi|257475290|gb|ACV55610.1| protein of unknown function UPF0054 [Eggerthella lenta DSM 2243]
 gi|316910382|gb|EFV32013.1| hypothetical protein HMPREF1023_02709 [Eggerthella sp. 1_3_56FAA]
 gi|325486633|gb|EGC89081.1| translation metalloprotein YbeY [Eggerthella sp. HGA1]
          Length = 153

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-------LGDIVLA 107
            E+S+ F     I  LN  YR  + PT+VLSF       D  +  +       LGD+V+A
Sbjct: 36  TEVSISFVTDEAIAELNERYRHKEGPTDVLSFECDGVDDDLSAMTLAEDPVYELGDVVIA 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            ++   +    G  FE  +  L++HG LHL GYDH++D +A VME  E  ILE
Sbjct: 96  PDVASRQTREFGTTFEEEISLLLVHGLLHLCGYDHIEDDEAEVMEKREAEILE 148


>gi|218189024|gb|EEC71451.1| hypothetical protein OsI_03674 [Oryza sativa Indica Group]
          Length = 593

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S++  + + I+ LN E+RG D    +LS        D    LMLGDIV++ E    +
Sbjct: 171 VEVSVLLCNDNFIQNLNKEWRGEDSCIEMLSMSQYIPDLD-VPILMLGDIVISVETAARQ 229

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
           A   G    + +  L + G L LLG+DH   D+ A  ME  E+ IL+ L
Sbjct: 230 AEERGHTLLDEVRILAVRGILRLLGFDHQTSDESAVEMEKEEQLILKSL 278


>gi|15612152|ref|NP_223804.1| putative metalloprotease [Helicobacter pylori J99]
 gi|11387377|sp|Q9ZK54|RRMF_HELPJ RecName: Full=Probable rRNA maturation factor
 gi|4155684|gb|AAD06669.1| putative [Helicobacter pylori J99]
          Length = 141

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + R  D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDLRDCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  DK
Sbjct: 81  ENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDK 114


>gi|108804346|ref|YP_644283.1| hypothetical protein Rxyl_1509 [Rubrobacter xylanophilus DSM 9941]
 gi|122381776|sp|Q1AVV7|RRMF_RUBXD RecName: Full=Probable rRNA maturation factor
 gi|108765589|gb|ABG04471.1| protein of unknown function UPF0054 [Rubrobacter xylanophilus DSM
           9941]
          Length = 135

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 16/109 (14%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           E + ELS+   +   I  LN ++R  D PT+VLSF       DG    M+G+IV+     
Sbjct: 38  ERMGELSVALVEPEVIHDLNLKFRNKDAPTDVLSF-----EVDGPYGEMVGEIVICPGCA 92

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           E++           L  L++HG LHL G DH ++ +A  M  +++ ++E
Sbjct: 93  EMD-----------LEELVVHGALHLSGMDHGENFEASEMARVQKRVME 130


>gi|255322579|ref|ZP_05363724.1| conserved hypothetical protein [Campylobacter showae RM3277]
 gi|255300487|gb|EET79759.1| conserved hypothetical protein [Campylobacter showae RM3277]
          Length = 152

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 7/109 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ L F D+  ++ +N   RGI + T+VLSFP             LG IV+  E++  +A
Sbjct: 37  EVELSFVDAEEMKEINVRQRGIYETTDVLSFPLEMHLH-----APLGCIVINTELVAAKA 91

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             LG   ++    L  HG LH+LG+DH  + DA  M   E  ++E   +
Sbjct: 92  AELGHSEDDETALLFTHGLLHVLGFDH--ESDAGEMRAKECEVIEKFSL 138


>gi|78777269|ref|YP_393584.1| putative metalloprotease [Sulfurimonas denitrificans DSM 1251]
 gi|123550289|sp|Q30RN2|RRMF_SULDN RecName: Full=Probable rRNA maturation factor
 gi|78497809|gb|ABB44349.1| Protein of unknown function UPF0054 [Sulfurimonas denitrificans DSM
           1251]
          Length = 139

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ L+ TD   +  +N  +R IDK T+VLSFP             LG IV+    +E ++
Sbjct: 28  EIELIVTDKDEMREINSAHRNIDKATDVLSFPYIEMPLSP-----LGSIVICSLHVEEKS 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              G    +    L IHG LHLLGYDH  + D+  M   E  I+++  +
Sbjct: 83  KEFGHTLNDEFALLFIHGLLHLLGYDH--EVDSGEMREEEARIIKEFNL 129


>gi|239907522|ref|YP_002954263.1| hypothetical protein DMR_28860 [Desulfovibrio magneticus RS-1]
 gi|239797388|dbj|BAH76377.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 141

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+ G+  PTN+LSFP    + D      LG++ L+ + +  EA + G+    H+  L+
Sbjct: 52  NGEFLGLPGPTNILSFP----AEDPDRPDYLGELALSLDAVRREAFLYGQPPGLHMARLL 107

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            HGFLHL G DH       +ME L  +  E
Sbjct: 108 AHGFLHLAGLDH-----GPLMESLTETAAE 132


>gi|260910780|ref|ZP_05917432.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260635102|gb|EEX53140.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 140

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+  +F +  +I  +N EY G D  T+V++F   +   D    ++ GDIV++ + +   A
Sbjct: 36  EVGYMFVNDEKILEINNEYLGHDYYTDVITFD--YDEGD----VVNGDIVISLDTVRTNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            + GK +E+ L  +IIHG LHL G +     +  +ME  E   LE
Sbjct: 90  EMFGKAYEDELYRVIIHGILHLCGLNDKGPGEREIMEKAENKALE 134


>gi|466970|gb|AAA17156.1| B1937_F1_21 [Mycobacterium leprae]
          Length = 140

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFP--------TAFASSDGCSSLMLGDIVLAYEI 110
           +V  D+  +  L+  +  +  PT+V+SFP           A+  G S  MLGDIVL  E 
Sbjct: 1   MVLLDTAAMADLHMRWMDLPGPTDVMSFPMDEFEPGGRPDAAEPGPS--MLGDIVLCPEF 58

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
              +A   G    + L  L IHG LHLLGYDH +  +   M  L+  +LE+
Sbjct: 59  AAQQAAAEGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQGRLLEE 109


>gi|24379999|ref|NP_721954.1| putative metalloprotease [Streptococcus mutans UA159]
 gi|29428194|sp|Q8DSY7|RRMF_STRMU RecName: Full=Probable rRNA maturation factor
 gi|24377987|gb|AAN59260.1|AE014993_4 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 164

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFASSDGCS--------------S 98
           E+++ F  + R   LN +YR  ++PT+V+S    P +  S D                  
Sbjct: 37  EMAVTFVTNERSHELNLKYRDTNRPTDVISLEYKPESSLSFDEEDLADDPDLAEVLTEFD 96

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISVDKAREQAQEYGHSFEREMGFLAVHGFLHINGYDHYTPQEEKEMFSLQEEI 156

Query: 159 LEDLGIN 165
           L+  G+ 
Sbjct: 157 LDAYGLK 163


>gi|291401045|ref|XP_002716899.1| PREDICTED: C21orf57 isoform A protein-like [Oryctolagus cuniculus]
          Length = 164

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L +V  D+  I+ +N  YRG + PT+VLSFP         F   D      LGDI L  
Sbjct: 36  DLGVVCVDNRSIQRINRVYRGKNAPTDVLSFPFHENLKAGEFPQPDSPDDYNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E I  +     +++ + L     HG  HLLG+ H  + +   M   E  +L++L
Sbjct: 96  EYI-FQQCKDKEDYYDALAVTATHGLCHLLGFTHSTEAEWRKMYQKEEQVLQEL 148


>gi|290580022|ref|YP_003484414.1| hypothetical protein SmuNN2025_0496 [Streptococcus mutans NN2025]
 gi|254996921|dbj|BAH87522.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 166

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------------DGCSSLM--- 100
           E+++ F  + R   LN +YR  ++PT+V+S      SS            D    L    
Sbjct: 39  EMAVTFVTNERSHELNLKYRDTNRPTDVISLEYKPESSLSFDEEDLADDPDLAEVLTEFD 98

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 99  AYIGELFISVDKAREQAQEYGHSFEREMGFLAVHGFLHINGYDHYTPQEEKEMFSLQEEI 158

Query: 159 LEDLGIN 165
           L+  G+ 
Sbjct: 159 LDAYGLK 165


>gi|2749950|gb|AAC38046.1| unknown [Streptococcus mutans]
          Length = 164

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 17/127 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------------DGCSSLM--- 100
           E+++ F  + R   LN +YR  ++PT+V+S      SS            D    L    
Sbjct: 37  EMAVTFVTNERSHELNLKYRDTNRPTDVISLEYKPESSLSFDEEDLADDPDLAEVLTEFD 96

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             +G++ ++ +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  I
Sbjct: 97  AYIGELFISVDKAREQAQEYGHSFEREMGFLAVHGFLHINGYDHYTPQEEKEMFSLQEEI 156

Query: 159 LEDLGIN 165
           L+  G+ 
Sbjct: 157 LDAYGLK 163


>gi|324998268|ref|ZP_08119380.1| metal-binding heat shock protein [Pseudonocardia sp. P1]
          Length = 181

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-------CSSLMLGDIVLA 107
            EL++       +E L+  +     PT+V++FP    + DG           +LGD+VL 
Sbjct: 35  AELAITAVALDAMEELHVRWMDEPGPTDVMAFPMDSLADDGRRPDAPDLGPALLGDVVLC 94

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
                 +A   G    + L  L +HG LHLLGYDH++  D   M  L+  +L
Sbjct: 95  PAFARDQARKAGHTLADELHLLTVHGILHLLGYDHLEPDDEREMFALQNRLL 146


>gi|257469443|ref|ZP_05633535.1| metal-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|317063687|ref|ZP_07928172.1| metal-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|313689363|gb|EFS26198.1| metal-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 155

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIV 105
           F  +  V LS++FT +  I+ +N +YRG D+PT+V+SF  A+  +   D      LGDIV
Sbjct: 35  FESDRPVYLSILFTGNEEIQVINKQYRGKDQPTDVISF--AYHETEDFDIGPYDTLGDIV 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           ++ E ++ +A       +  L +++ HG LHLLGYDH+++ D   M   E  IL   G
Sbjct: 93  ISMERVDEQAAEYNHSPKRELYYVLTHGLLHLLGYDHIEEDDKKEMRAREEEILGQFG 150


>gi|308184901|ref|YP_003929034.1| putative metalloprotease [Helicobacter pylori SJM180]
 gi|308060821|gb|ADO02717.1| putative metalloprotease [Helicobacter pylori SJM180]
          Length = 140

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I+EL LV  ++ R   +N + R  D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QIIELVLVSDETMR--EINRDLRNCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  LG   E+ +  L IHG LHLLGYDH  D+
Sbjct: 81  ENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDR 114


>gi|157164120|ref|YP_001466415.1| putative metalloprotease [Campylobacter concisus 13826]
 gi|166227306|sp|A7ZCA7|RRMF_CAMC1 RecName: Full=Probable rRNA maturation factor
 gi|112801656|gb|EAT99000.1| putative metalloprotease _0477 [Campylobacter concisus 13826]
          Length = 145

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ L+F +   +  LN   RGIDK T+VLSFP             LG IV+  ++++ +A
Sbjct: 23  EVELLFINKDEMRELNRSERGIDKTTDVLSFPLELVIHAP-----LGSIVINKDMVKEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             L    +     L  HG LH+LGYDH  D
Sbjct: 78  AELNHSEDAETALLFTHGLLHILGYDHEKD 107


>gi|328953968|ref|YP_004371302.1| metalloprotease ybeY [Desulfobacca acetoxidans DSM 11109]
 gi|328454292|gb|AEB10121.1| metalloprotease ybeY [Desulfobacca acetoxidans DSM 11109]
          Length = 128

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 55  VELSLVFTDSHRIETLN---FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
            ELSL F +   +  LN    + RG    TNV++ P            +LGD++++ E  
Sbjct: 6   AELSLTFVNDPAMARLNRTIMQRRGT---TNVIALPQQGGPFPEVQPQILGDVIISLETT 62

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
           + +A   G EF       +IHG LHLLGYDH   + A 
Sbjct: 63  QRQAWQQGWEFAELFDLYLIHGILHLLGYDHETSEAAA 100


>gi|224054065|ref|XP_002192222.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 164

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSS--LMLGDIVLAYE 109
           ++ LV   +  ++ LN  YR   +PT+VLSFP     A      C      LGDI L  E
Sbjct: 36  DVGLVCASNALMQRLNGAYRHCPEPTDVLSFPFHQVAAGELPRPCCRGEYNLGDIFLGVE 95

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            I  +    G+ F++ L     HG  HLLGY H    +   M   E  ILE+L
Sbjct: 96  YIHQQCRETGENFDDVLTVTAAHGLCHLLGYRHDTKPEWEQMYQKEAQILEEL 148


>gi|145572767|sp|A2BUF9|RRMF_PROM5 RecName: Full=Probable rRNA maturation factor
          Length = 180

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +  E++ W + +    LC +    +  N     +   + I  LSL   +++ I ++N ++
Sbjct: 34  LIFESSFWEEVL----LCWINIILSEKNTSFPNFIFDKKIFSLSLQIINNNEISSINQKW 89

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
                PT+VLSFP   +  D   +L    LGD+ ++ E+   ++       +  ++ L  
Sbjct: 90  MDKSGPTDVLSFPMI-SDEDTTKNLNFIELGDLFISLEMAFQQSLEFDHSIKKEMLWLAS 148

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           HGFLHLLG++H DD +   M   +  ++  L
Sbjct: 149 HGFLHLLGWEHNDDNELDNMLNFQEYLISKL 179


>gi|116511926|ref|YP_809142.1| putative metalloprotease [Lactococcus lactis subsp. cremoris SK11]
 gi|123125607|sp|Q02ZA2|RRMF_LACLS RecName: Full=Probable rRNA maturation factor
 gi|116107580|gb|ABJ72720.1| Predicted metal-dependent hydrolase [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 162

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 15/143 (10%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-- 94
            K V    +K   +KE+  E+S+ F D+ R   LN +YR  D+PT+V+S       S+  
Sbjct: 20  TKEVLAFAAKKLDLKES-TEMSVTFVDNARSHELNLQYRETDRPTDVISLEYKPDESEFF 78

Query: 95  ------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                             +G++ ++ +    +A   G   E     L +HGFLH+ GYDH
Sbjct: 79  FDEDMELPEELLEEMDPFIGELFISIDKAAEQAADYGHSIEREYGWLAVHGFLHINGYDH 138

Query: 143 VDDKDACVMEGLERSILEDLGIN 165
              ++   M  L+  IL   G+ 
Sbjct: 139 YMPEEESEMFALQEEILTAYGLT 161


>gi|242054369|ref|XP_002456330.1| hypothetical protein SORBIDRAFT_03g034080 [Sorghum bicolor]
 gi|241928305|gb|EES01450.1| hypothetical protein SORBIDRAFT_03g034080 [Sorghum bicolor]
          Length = 632

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K + VE+S++  + + I+ LN E+RG ++ T++LS        D    LMLGDIV++ E 
Sbjct: 206 KYDKVEVSVLLCNGNFIQDLNKEWRGENRTTDMLSMSQYIPDLD-VPILMLGDIVISVEA 264

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
              +A   G    + +  L++ G LHLLG+ H
Sbjct: 265 AARQAEEKGVTLLDEVRVLVVRGILHLLGFQH 296


>gi|74001576|ref|XP_848242.1| PREDICTED: similar to UPF0054 protein C21orf57 homolog isoform 1
           [Canis familiaris]
          Length = 164

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 8/114 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L L+  D+  ++ LN  YRG D+PT+VLSFP                    LGDIVL  
Sbjct: 36  DLGLLCVDNEGMQRLNRAYRGDDRPTDVLSFPFHENVKAGELPRPRSRDDYNLGDIVLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E +  +      ++ + L     HG  HLLG+ H  + +   M   E+ +LE+L
Sbjct: 96  EYV-FQRCRGDADYYDALTVTAAHGLCHLLGFTHSTEAEWRKMYQKEKQVLEEL 148


>gi|51598321|ref|YP_072509.1| putative metalloprotease [Borrelia garinii PBi]
 gi|59799021|sp|Q662V4|RRMF_BORGA RecName: Full=Probable rRNA maturation factor
 gi|51572892|gb|AAU06917.1| conserved hypothetical protein [Borrelia garinii PBi]
          Length = 152

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 14/138 (10%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLSVFHD--FILSVLNTLSISDF------ELSVILCDNVYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + LN ++R  ++PT+VLSF     +     G +  + GD+++++E ++  A     E   
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNELNEGLVGGINYKIQGDLIISFEYLKFSAQEFNVEIYE 109

Query: 125 HLVHLIIHGFLHLLGYDH 142
            L  + IHG LHL+G++H
Sbjct: 110 ELQRVTIHGILHLMGHNH 127


>gi|57505296|ref|ZP_00371225.1| conserved hypothetical protein TIGR00043 [Campylobacter upsaliensis
           RM3195]
 gi|57016432|gb|EAL53217.1| conserved hypothetical protein TIGR00043 [Campylobacter upsaliensis
           RM3195]
          Length = 135

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+F ++  +  LN ++R  +K T+VLSFP    +     +L LG IV+   + + +A
Sbjct: 22  DVELIFVENEEMRELNLKHRNKNKSTDVLSFPLQAINE----ALPLGSIVINKTLAQEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                  ++ +  L IH  LHLLG+DH  DK
Sbjct: 78  KEFHHSLKDEISLLFIHAMLHLLGFDHEKDK 108


>gi|296081586|emb|CBI20591.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VELS++  +   I  LN E+R  D  T+VLS             LMLGDIV++ E    +
Sbjct: 150 VELSVLLCNDEFIRKLNKEWRDEDHATDVLSMSQHIPELK-LPILMLGDIVISVETAARQ 208

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A   G    + +  L++HG LHLLG+DH
Sbjct: 209 AEERGHTLLDEIRILMVHGLLHLLGFDH 236


>gi|116749595|ref|YP_846282.1| hypothetical protein Sfum_2165 [Syntrophobacter fumaroxidans MPOB]
 gi|116698659|gb|ABK17847.1| protein of unknown function UPF0054 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 122

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S++  D   +  LN  YR  D  T+VLSFP            +LGD+V+   + +    
Sbjct: 1   MSILIVDDEEMAGLNSTYRRKDTSTDVLSFPMREGEFGDVCEEVLGDVVICAPMAKRMGE 60

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDH 142
           + G  F++ +  L++HG LHL+G+DH
Sbjct: 61  LHGASFQSVMDLLLVHGILHLVGHDH 86


>gi|50365081|ref|YP_053506.1| putative metal-dependent hydrolase [Mesoplasma florum L1]
 gi|59799030|sp|Q6F1K1|RRMF_MESFL RecName: Full=Probable rRNA maturation factor
 gi|50363637|gb|AAT75622.1| putative metal-dependent hydrolase [Mesoplasma florum L1]
          Length = 169

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 5/131 (3%)

Query: 40  VSNLISKG--YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--G 95
              +I+ G  Y   +N + LS+ F DS   + +N EYR      +V SFP   +  +   
Sbjct: 21  AKQIINSGFKYLKLKNKINLSITFLDSEPAQKINQEYRNHSYIPDVTSFPIEMSPQEIKA 80

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGL 154
                +GDI +  E  E ++       +  +  L  HGFLHL+GYDH  ++KD   M  +
Sbjct: 81  LGYQEIGDIFICIEEAERKSIKYDHSLKEEMGFLFTHGFLHLMGYDHETNEKDEEEMFFI 140

Query: 155 ERSILEDLGIN 165
           +  IL+   IN
Sbjct: 141 QDEILKINKIN 151


>gi|254432649|ref|ZP_05046352.1| hypothetical protein CPCC7001_2542 [Cyanobium sp. PCC 7001]
 gi|197627102|gb|EDY39661.1| hypothetical protein CPCC7001_2542 [Cyanobium sp. PCC 7001]
          Length = 194

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 18/128 (14%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM--------- 100
           ++     LSL   D   I  LN E+R    PT+VL+F       DG   L          
Sbjct: 58  LQARAYSLSLSLVDDAGIAALNQEWREKPGPTDVLAFAAQDDDLDGLPPLAPGPASAGLE 117

Query: 101 ---------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                    LGDIV++ +    +A   G   E  L  L  HG LHLLG+DH D+     M
Sbjct: 118 DELEEEPLELGDIVISVDTALRQAPEHGHSLEEELRFLASHGLLHLLGWDHPDEASLATM 177

Query: 152 EGLERSIL 159
              + ++L
Sbjct: 178 LARQDALL 185


>gi|308177462|ref|YP_003916868.1| metalloprotease [Arthrobacter arilaitensis Re117]
 gi|307744925|emb|CBT75897.1| putative metalloprotease [Arthrobacter arilaitensis Re117]
          Length = 157

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSLMLGDIVLAYE 109
            E+S+VF D   +  L+ E+  ++ PT+V+SFP        A + G + + LGDIV+   
Sbjct: 35  TEVSVVFIDEDAMSALHVEWMDLEGPTDVMSFPMDELRPGTAGAPGENGI-LGDIVICPS 93

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           I E +A   G    + ++ L  HG LHL+G+DH++  +   M GL+R +LE
Sbjct: 94  IAEAQAKAGGHSTHDEILLLTTHGLLHLMGFDHMEPAEKEEMFGLQRQLLE 144


>gi|225429386|ref|XP_002278343.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1499

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 55   VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            VELS++  +   I  LN E+R  D  T+VLS             LMLGDIV++ E    +
Sbjct: 1079 VELSVLLCNDEFIRKLNKEWRDEDHATDVLSMSQHIPELK-LPILMLGDIVISVETAARQ 1137

Query: 115  ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
            A   G    + +  L++HG LHLLG+DH
Sbjct: 1138 AEERGHTLLDEIRILMVHGLLHLLGFDH 1165


>gi|187250487|ref|YP_001874969.1| hydrolase family protein [Elusimicrobium minutum Pei191]
 gi|259645655|sp|B2KAT6|RRMF_ELUMP RecName: Full=Probable rRNA maturation factor
 gi|186970647|gb|ACC97632.1| Hydrolase family protein [Elusimicrobium minutum Pei191]
          Length = 143

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++L+F D   I  +N E+   D  T+V+SF   F    G   L  GDI + Y++ +  A
Sbjct: 38  EVNLIFVDGKEIHKINKEFLNHDYKTDVISFNYPFPQKGG-EGLPFGDIFVCYDVAKENA 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           ++ G+     ++   +HG LHL G D    K+   M+
Sbjct: 97  SLYGQGVLKEMLTYAVHGALHLAGMDDATPKERSAMD 133


>gi|221633270|ref|YP_002522495.1| hypothetical protein trd_1289 [Thermomicrobium roseum DSM 5159]
 gi|221155563|gb|ACM04690.1| putative conserved hypothetical protein TIGR00043 [Thermomicrobium
           roseum DSM 5159]
          Length = 165

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I  L+  ++GI  PT+V+SFP             LGDI ++ E   ++   +G      +
Sbjct: 51  IAELHERFQGIPGPTDVMSFPG--------EPPYLGDIAVSAETAAVQGAEVGHGVGREI 102

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             L +HGFLHL+GYD + + +   M  LER 
Sbjct: 103 AFLTVHGFLHLIGYDDLSEPERSRM--LERQ 131


>gi|150020475|ref|YP_001305829.1| hypothetical protein Tmel_0577 [Thermosipho melanesiensis BI429]
 gi|172048663|sp|A6LKJ3|RRMF_THEM4 RecName: Full=Probable rRNA maturation factor
 gi|149792996|gb|ABR30444.1| protein of unknown function UPF0054 [Thermosipho melanesiensis
           BI429]
          Length = 138

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           V ++LVF    +I+ +N E+R I+  T+VL+F   +   D     +  +I L  ++IE  
Sbjct: 28  VNINLVFLSKEKIKKINREFRNINSETDVLTF--VYGDDD-----LFAEIYLCEDVIEEN 80

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           A      +E  L+ ++IH  LH  GYDH  DK
Sbjct: 81  AKKFSNTYEKELLMVLIHAALHCSGYDHEYDK 112


>gi|78187213|ref|YP_375256.1| hypothetical protein Plut_1354 [Chlorobium luteolum DSM 273]
 gi|123582883|sp|Q3B368|RRMF_PELLD RecName: Full=Probable rRNA maturation factor
 gi|78167115|gb|ABB24213.1| Protein of unknown function UPF0054 [Chlorobium luteolum DSM 273]
          Length = 137

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 9/134 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L + +  +AV  +I        + +E++ V+  S     +N EY   D PT+ +SFP 
Sbjct: 11  RKLDDALLCRAVETVIQGE---GRHALEIAAVYCGSRMSRRINREYLQHDWPTDTISFPY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                 G    + G+  +  ++IE  A     +FE  L  + IH  LHL GYD    +D 
Sbjct: 68  ------GSGGNVEGEFYICLDVIEENARRFNTDFERELFRVTIHSVLHLAGYDDHLPEDR 121

Query: 149 CVMEGLERSILEDL 162
             M   E S L+ L
Sbjct: 122 RRMTEREDSYLQQL 135


>gi|119716145|ref|YP_923110.1| putative metalloprotease [Nocardioides sp. JS614]
 gi|166227491|sp|A1SHY8|RRMF_NOCSJ RecName: Full=Probable rRNA maturation factor
 gi|119536806|gb|ABL81423.1| protein of unknown function UPF0054 [Nocardioides sp. JS614]
          Length = 149

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 11/130 (8%)

Query: 40  VSNLISKGYFVKEN-----IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TA 89
           V  L +   FV +      + EL +   D   I  LN ++     PT+VL+FP       
Sbjct: 15  VKRLAALSRFVMDRMRVHPLAELCIKAVDEPTIAQLNEQWMEKAGPTDVLAFPMDELRPG 74

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               D    + LGD+VL  ++   +    G   E  +  L +HG LHLLGYDH + ++  
Sbjct: 75  LVDEDPEEGV-LGDLVLCPDVAARQGETAGHGTEAEIELLTVHGILHLLGYDHAEPEEHR 133

Query: 150 VMEGLERSIL 159
            M GL+  +L
Sbjct: 134 EMFGLQDELL 143


>gi|87300846|ref|ZP_01083688.1| hypothetical protein WH5701_05340 [Synechococcus sp. WH 5701]
 gi|87284717|gb|EAQ76669.1| hypothetical protein WH5701_05340 [Synechococcus sp. WH 5701]
          Length = 202

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 19/115 (16%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---------------PTAFAS-- 92
           ++     L L       +  LN  +R    PT+VL+F               P   AS  
Sbjct: 58  LRAPAYSLGLSLVGDGEMAELNESWRSQQGPTDVLAFAAQDEGLEGAPAMPKPPELASDQ 117

Query: 93  --SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
              +    L LGDIV++ E    +A   G      L  L  HG LHLLG+DH DD
Sbjct: 118 ELPEQGEPLELGDIVISLETAARQAEAAGVSLARELRWLASHGLLHLLGWDHPDD 172


>gi|222823735|ref|YP_002575309.1| conserved hypothetical protein (UPF0054 domain protein)
           [Campylobacter lari RM2100]
 gi|222538957|gb|ACM64058.1| conserved hypothetical protein (UPF0054 domain protein)
           [Campylobacter lari RM2100]
          Length = 137

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV  D   +  +N   RG+DK T+VLSFP        C +L LG IV+  + +  +A 
Sbjct: 25  IELVLVDEKIMHEINLNQRGVDKTTDVLSFPLV----QNCENL-LGSIVINLDEVSKKAM 79

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                 E  +  L IH  LHL GYDH  D+
Sbjct: 80  EYKHSNEEEMALLFIHAMLHLQGYDHEVDQ 109


>gi|123965446|ref|YP_001010527.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9515]
 gi|123199812|gb|ABM71420.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9515]
          Length = 135

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 4/135 (2%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           +C +    +  N     +   + I  LSL   +++ I ++N ++     PT+VLSFP   
Sbjct: 1   MCWINIILSEKNTSFPNFIFDKKIFSLSLQIINNNEISSINQKWMDKSGPTDVLSFP-MI 59

Query: 91  ASSDGCSSLM---LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
           +  D   +L    LGD+ ++ E+   ++       +  ++ L  HGFLHLLG++H DD +
Sbjct: 60  SDEDTTKNLNFIELGDLFISLEMAFQQSLEFDHSIKKEMLWLASHGFLHLLGWEHNDDNE 119

Query: 148 ACVMEGLERSILEDL 162
              M   +  ++  L
Sbjct: 120 LDNMLNFQEYLISKL 134


>gi|15807086|ref|NP_295815.1| hypothetical protein DR_2092 [Deinococcus radiodurans R1]
 gi|6459888|gb|AAF11642.1|AE002045_2 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 175

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++V      I  L  E+ G D  T+VLSFPT +   D      LGDI+++ +  + +A
Sbjct: 55  EVTVVLVGDPEIRALKLEHWGEDAATDVLSFPT-WEPGDPFMPPHLGDIIISLDTAQRQA 113

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G      +  L  HG  HL+G+DH
Sbjct: 114 ESRGHSLTREVALLASHGLTHLVGHDH 140


>gi|229820243|ref|YP_002881769.1| protein of unknown function UPF0054 [Beutenbergia cavernae DSM
           12333]
 gi|259646478|sp|C5C494|RRMF_BEUC1 RecName: Full=Probable rRNA maturation factor
 gi|229566156|gb|ACQ80007.1| protein of unknown function UPF0054 [Beutenbergia cavernae DSM
           12333]
          Length = 150

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSL-MLGDIVLAYEI 110
            ELS++F D   +  L+  +     PT+VLSFP         D  S   +LGD+VL  E+
Sbjct: 35  AELSILFVDIPAMSDLHERWMDEPGPTDVLSFPMDELRPGRDDAPSGPGVLGDVVLCPEV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G   E  L+ L  HG LHLLG+DH +  +   M  L+R +L
Sbjct: 95  AAEQARTAGHSTEEELLLLTTHGILHLLGFDHAEPDEEREMFDLQRKLL 143


>gi|303237783|ref|ZP_07324341.1| translation metalloprotein YbeY [Prevotella disiens FB035-09AN]
 gi|302482008|gb|EFL45045.1| translation metalloprotein YbeY [Prevotella disiens FB035-09AN]
          Length = 142

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 16/111 (14%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEI 110
           + + E+  +F D  +I  +N EY G D  T+V++F       D C    L GDIV++ + 
Sbjct: 32  KKVGEIGYMFVDDEKILEVNNEYLGHDYYTDVITF-------DYCEENELNGDIVISLDT 84

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           +   A   GK +E  L  +IIHG LHL G   ++DK        ER I+E+
Sbjct: 85  VRTNAEKFGKTYEEELYRVIIHGILHLCG---INDKGPG-----EREIMEE 127


>gi|47086839|ref|NP_997759.1| rRNA maturation factor homolog [Danio rerio]
 gi|326681334|ref|XP_003201790.1| PREDICTED: rRNA maturation factor homolog [Danio rerio]
 gi|45709063|gb|AAH67584.1| Zgc:85702 [Danio rerio]
          Length = 163

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CS----SLMLGDIVLAY 108
           ++ ++  D+ +I+ +N  YR  ++PT+VLSFP       G   C+       LGDI L  
Sbjct: 36  DMGIICVDNRKIQRINHTYRRRNQPTDVLSFPFYEDLRPGKVPCALQRDEYNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E +  +     ++    L  +  HG  HLLGY H  +++   M+  E  IL + 
Sbjct: 96  EYVMQQCKETKQDLHQTLTVVTAHGICHLLGYRHETEEEWNEMQQKESYILSEF 149


>gi|300727523|ref|ZP_07060914.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299775226|gb|EFI71827.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 145

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + ++  +F D  RI   N +Y G D  T+V++F   +       +++ GDIV++ + I
Sbjct: 32  KKVGDIGYMFVDDERILECNRQYLGHDYYTDVITFD--YDDDYEEENIIGGDIVISLDTI 89

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
              A   GK +E+ L  +IIHG LHL G +     +  +ME  E   L+
Sbjct: 90  RTNAEKFGKTYEDELYRVIIHGILHLCGINDKGPGEREIMEAHEDKALK 138


>gi|313665395|ref|YP_004047266.1| metalloprotein, YbeY family [Mycoplasma leachii PG50]
 gi|312950006|gb|ADR24602.1| metalloprotein, YbeY family [Mycoplasma leachii PG50]
          Length = 164

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 5/130 (3%)

Query: 36  FAKAVSNLISKG---YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           F K  +N I K    YF     +ELS+ F D  + + +N +YR      +V SF      
Sbjct: 16  FWKKFANKILKTAYEYFNFNYDIELSITFVDDLKAQQINQKYRNHSYIADVTSFSVEMTD 75

Query: 93  SD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
            +        LGD+ +     + +A     +  + +  L +HGFLHLLGYDH D  D  +
Sbjct: 76  QEIKAIGFRELGDMFINLSEAKRKAIKYEHDLNSEMGFLFVHGFLHLLGYDHEDLDDEKI 135

Query: 151 MEGLERSILE 160
           M  L+  IL+
Sbjct: 136 MFDLQDQILK 145


>gi|145559542|sp|Q9RSN2|RRMF_DEIRA RecName: Full=Probable rRNA maturation factor
          Length = 155

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++V      I  L  E+ G D  T+VLSFPT +   D      LGDI+++ +  + +A
Sbjct: 35  EVTVVLVGDPEIRALKLEHWGEDAATDVLSFPT-WEPGDPFMPPHLGDIIISLDTAQRQA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G      +  L  HG  HL+G+DH
Sbjct: 94  ESRGHSLTREVALLASHGLTHLVGHDH 120


>gi|206895766|ref|YP_002246845.1| putative metalloprotease [Coprothermobacter proteolyticus DSM 5265]
 gi|206738383|gb|ACI17461.1| putative metalloprotease [Coprothermobacter proteolyticus DSM 5265]
          Length = 148

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++S+ F +   I  LN +YR  ++PT+VLSF     + +G     LG+I++   +   +A
Sbjct: 35  DVSVYFCNERTIIDLNTQYRFNEEPTDVLSF-----TGEGD---FLGEIIICVPVALRQA 86

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
              G +++     LI+H FLHLLGYD   ++    M  ++  +L++LG
Sbjct: 87  EESGVDWQVEFAMLIVHSFLHLLGYDDETEEGFAEMVEVQNKLLKELG 134


>gi|295105853|emb|CBL03396.1| conserved hypothetical protein TIGR00043 [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 155

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-------LGDIVLA 107
            E+S+ F     I  LN  YR  + PT+VLSF     + D  +  +       LGD+++A
Sbjct: 36  TEVSVSFVTDEAIAELNERYRHKEGPTDVLSFECDGVNDDLSAMTLAEDPVYELGDVIIA 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            ++   +    G  FE  +  L++HG LHL GYDH+ D +A VME  E  ILE
Sbjct: 96  PDVAARQTREFGTSFEEEISLLLVHGLLHLCGYDHIADDEAEVMEKREAEILE 148


>gi|296140455|ref|YP_003647698.1| hypothetical protein Tpau_2761 [Tsukamurella paurometabola DSM
           20162]
 gi|296028589|gb|ADG79359.1| protein of unknown function UPF0054 [Tsukamurella paurometabola DSM
           20162]
          Length = 179

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 6/111 (5%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------LGDIVLAY 108
            EL+++  D   +  L+ ++  +  PT+V+SFP    +  G   ++      LGDIVL  
Sbjct: 35  AELNMLAVDLDTMADLHVKWMDLPGPTDVMSFPMDELTPGGRPDMVDAGPATLGDIVLCP 94

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +    +A   G    + L  L +HG LHLLG+DH + ++   M GL+ SIL
Sbjct: 95  QFAAEQAEAAGHSTAHELNVLTVHGVLHLLGFDHAEPEEEREMFGLQDSIL 145


>gi|315639262|ref|ZP_07894424.1| metalloprotease [Campylobacter upsaliensis JV21]
 gi|315480588|gb|EFU71230.1| metalloprotease [Campylobacter upsaliensis JV21]
          Length = 135

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+F ++  +  LN ++R  +K T+VLSFP    +     +L LG IV+   + + +A
Sbjct: 22  DVELIFVENEEMRELNLKHRNKNKSTDVLSFPLQAINE----ALPLGSIVINKTLAQEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                  ++ +  L IH  LHLLG+DH  D+
Sbjct: 78  KEFHHSLKDEISLLFIHAMLHLLGFDHEKDR 108


>gi|256372050|ref|YP_003109874.1| protein of unknown function UPF0054 [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008634|gb|ACU54201.1| protein of unknown function UPF0054 [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 181

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 23/112 (20%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---------SLMLGD 103
            + ELS+VF D+  I +LN  YRG   PT+VLSF       D              +LGD
Sbjct: 42  GVSELSVVFVDAETIASLNARYRGRVGPTDVLSFAIDDVGDDASEHRPSTASGLPTLLGD 101

Query: 104 IVLAYEIIEIEA----------NVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           +V+  E+    A            +G E    +  L+IHG LH+ G+DH  D
Sbjct: 102 VVICPEVARTNAPEHRGDRGHDGSVGDE----VALLLIHGILHIRGWDHEAD 149


>gi|317051561|ref|YP_004112677.1| hypothetical protein Selin_1386 [Desulfurispirillum indicum S5]
 gi|316946645|gb|ADU66121.1| protein of unknown function UPF0054 [Desulfurispirillum indicum S5]
          Length = 152

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 67  IETLNFEYRGIDKPTNVLSFP---TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           ++ +N +YR  D  T+VLSF    +   S +     ++GD+ L  ++I   A   G  FE
Sbjct: 48  MQQMNAQYRSRDYATDVLSFQYYESTELSGNTDPDEVIGDMALCLDVIRENAVSRGVSFE 107

Query: 124 NHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILE 160
             L  +IIHG LH+ GYDH + ++ A  M+  E  +L+
Sbjct: 108 EELSFMIIHGILHVCGYDHEISEEHAQQMQQQELRLLD 145


>gi|282878864|ref|ZP_06287631.1| metalloprotein, YbeY/ UPF0054family [Prevotella buccalis ATCC
           35310]
 gi|281299072|gb|EFA91474.1| metalloprotein, YbeY/ UPF0054family [Prevotella buccalis ATCC
           35310]
          Length = 141

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
            I E+  +F D  +I  +N EY G D  T++++F   +   D    ++ GDIV++ + + 
Sbjct: 33  KIGEVGYMFVDDEKILEVNNEYLGHDYYTDIITFD--YDEGD----IINGDIVISLDTVR 86

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             A   GK +E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 87  TNAERFGKPYEEELYRVIIHGILHLCGINDKGPGEREIMEAAEDKAL 133


>gi|117927998|ref|YP_872549.1| putative metalloprotease [Acidothermus cellulolyticus 11B]
 gi|145558839|sp|A0LT03|RRMF_ACIC1 RecName: Full=Probable rRNA maturation factor
 gi|117648461|gb|ABK52563.1| protein of unknown function UPF0054 [Acidothermus cellulolyticus
           11B]
          Length = 164

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--------DGCSSLMLGDIV 105
           + ELS++  D   +  L+  +     PT+VLSFP                    +LGD+V
Sbjct: 34  LAELSILLVDEGEMAVLHERWMDEPGPTDVLSFPMDELRPGRLDVEIDPDAEPAVLGDVV 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           L   + + +A   G   ++ L  L +HG LHLLGYDH ++     M  L+  +L
Sbjct: 94  LCPAVAKQQARHAGHSTQDELELLTVHGILHLLGYDHAEEDAEREMFALQSELL 147


>gi|57899484|dbj|BAD86945.1| haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica
           Group]
          Length = 593

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S++  + + I+ LN E+RG D    +LS        D    LMLGDIV++ E    +
Sbjct: 171 VEVSVLLCNDNFIQNLNKEWRGEDSCIEMLSMSQYIPDLD-VPILMLGDIVISVETAARQ 229

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV-MEGLERSILEDL 162
           A   G    + +  L + G L LLG+DH    ++ V ME  E+ IL+ L
Sbjct: 230 AEERGHTLLDEVRILAVRGILRLLGFDHQTSHESAVEMEKEEQLILKSL 278


>gi|226227119|ref|YP_002761225.1| hypothetical protein GAU_1713 [Gemmatimonas aurantiaca T-27]
 gi|226090310|dbj|BAH38755.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 167

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           LS+ F  S  + TLN ++ G   PT+V++F    A  +     ++GDI +  ++   +A 
Sbjct: 56  LSITFVTSRAMATLNRQHLGHTGPTDVITF----ALGNAPDGTVIGDIYICPDVARRQAR 111

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             G      L  L++HG LH  G++H +D
Sbjct: 112 EHGVGIREELARLVVHGTLHASGWEHPED 140


>gi|125571963|gb|EAZ13478.1| hypothetical protein OsJ_03394 [Oryza sativa Japonica Group]
          Length = 425

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S++  + + I+ LN E+RG D    +LS        D    LMLGDIV++ E    +
Sbjct: 31  VEVSVLLCNDNFIQNLNKEWRGEDSCIEMLSMSQYIPDLD-VPILMLGDIVISVETAARQ 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV-MEGLERSILEDL 162
           A   G    + +  L + G L LLG+DH    ++ V ME  E+ IL+ L
Sbjct: 90  AEERGHTLLDEVRILAVRGILRLLGFDHQTSHESAVEMEKEEQLILKSL 138


>gi|319440586|ref|ZP_07989742.1| metal-binding heat shock protein [Corynebacterium variabile DSM
           44702]
          Length = 183

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----TAFASSDGCSSL--MLGDIVLA 107
            ELS+   D   I  L+  +  +  PT+V+SFP       +   DG      +LGDI+L 
Sbjct: 36  AELSIHIVDLETIADLHVRWLDLPGPTDVMSFPMDELTPGWGRKDGPPPGPGVLGDIMLC 95

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +  + +A+  G    + L  L +HG LHLLG+DHV  ++   M  L+  IL
Sbjct: 96  PDFAQGQADKAGHPLAHELDLLTVHGVLHLLGFDHVVPEEEQRMFALQNEIL 147


>gi|148270413|ref|YP_001244873.1| hypothetical protein Tpet_1283 [Thermotoga petrophila RKU-1]
 gi|281412720|ref|YP_003346799.1| protein of unknown function UPF0054 [Thermotoga naphthophila
           RKU-10]
 gi|166200326|sp|A5IM74|RRMF_THEP1 RecName: Full=Probable rRNA maturation factor
 gi|147735957|gb|ABQ47297.1| protein of unknown function UPF0054 [Thermotoga petrophila RKU-1]
 gi|281373823|gb|ADA67385.1| protein of unknown function UPF0054 [Thermotoga naphthophila
           RKU-10]
          Length = 150

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           V ++++      I+ LN ++R  D+PT+VL+F       D     + G+I +   I+E  
Sbjct: 32  VHVNVILVSEDEIKELNQQFRSHDQPTDVLTF--LLMEED-----VYGEIYVCPMIVEEN 84

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH--VDDKDACVMEGLERSILEDLG--INDPYE 169
           A      FE  L+ ++IHG LHL GYDH   D K   + E  ++ + E  G   +DP E
Sbjct: 85  AKEFSNTFEKELLEVVIHGILHLAGYDHEFEDRKSKEMFEKQKKYVEEVWGEWRSDPSE 143


>gi|308062438|gb|ADO04326.1| putative metalloprotease [Helicobacter pylori Cuz20]
          Length = 140

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
             +EL LV  ++ R   +N + RG D  T+VLSFP      +      LG +V+   + +
Sbjct: 28  QTIELVLVSDETMR--EINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQ 80

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             A  L    E  +  L IHG LHLLGYDH  DK
Sbjct: 81  ENALKLEHSLEEEIALLFIHGVLHLLGYDHEKDK 114


>gi|218885681|ref|YP_002435002.1| hypothetical protein DvMF_0577 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756635|gb|ACL07534.1| protein of unknown function UPF0054 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 171

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 64/149 (42%), Gaps = 24/149 (16%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--------A 89
           +AV   + +   +    VEL LV  +   I  LN  + G   PTN+LSFP         A
Sbjct: 22  RAVFAAMQEATGLAGCTVELDLVGDE--EIARLNAAHLGCTGPTNILSFPAHDGGPHDGA 79

Query: 90  FASS---------DGC---SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
            ASS         DG    +   LG +VL+ +    E  + G+E   H + L+ HG  HL
Sbjct: 80  HASSPDRSHGGPHDGPDEDAPCHLGWLVLSLDTWRRECQLYGQEPVEHALRLLAHGLGHL 139

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIND 166
            GYDH  + D      LE     D G+ D
Sbjct: 140 AGYDHGPEMDEFTDAALEAG--RDAGLAD 166


>gi|288928685|ref|ZP_06422531.1| metalloprotease [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329669|gb|EFC68254.1| metalloprotease [Prevotella sp. oral taxon 317 str. F0108]
          Length = 140

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 6/109 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E+  +F +  +I  +N EY G D  T+V++F   +   D    ++ GDIV++ + +
Sbjct: 32  KKVGEVGYMFVNDEKILEINNEYLGHDYYTDVITFD--YDEDD----VVNGDIVISLDTV 85

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
              A +  K FE+ L  +IIHG LHL G +     +  +ME  E   LE
Sbjct: 86  RTNAELFDKAFEDELYRVIIHGILHLCGLNDKGPGEREIMEKAENKALE 134


>gi|303284399|ref|XP_003061490.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456820|gb|EEH54120.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 689

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGCSSLMLGDIVLAYEIIEIE 114
           ELS+       I  LN E+RG D  T+VLSFP  AF        ++ GD+V++ +    +
Sbjct: 213 ELSVALCGDAYIRALNNEWRGKDVATDVLSFPQDAFGDF-----VVFGDVVISVDAARRQ 267

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           A  +          L+ HGF+HLLGYDH
Sbjct: 268 AAAMRHSTRREARVLLTHGFVHLLGYDH 295


>gi|120437624|ref|YP_863310.1| hypothetical protein GFO_3300 [Gramella forsetii KT0803]
 gi|145558812|sp|A0M6J8|RRMF_GRAFK RecName: Full=Probable rRNA maturation factor
 gi|117579774|emb|CAL68243.1| protein belonging to UPF0054 [Gramella forsetii KT0803]
          Length = 143

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           I ++S +F D   +  +N EY   D  T+++SF     ++      + GDI ++ E ++ 
Sbjct: 37  IGDISFIFCDDEYLHKINLEYLAHDTYTDIISFDNTLGNT------LQGDIYISTERVQE 90

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            AN    EF+  L  ++IHG LH  G+    +++  +M   E
Sbjct: 91  NANSFNTEFDEELKRVLIHGILHFCGFKDKTEREQELMRRKE 132


>gi|282880546|ref|ZP_06289253.1| metalloprotein, YbeY/ UPF0054family [Prevotella timonensis CRIS
           5C-B1]
 gi|281305649|gb|EFA97702.1| metalloprotein, YbeY/ UPF0054family [Prevotella timonensis CRIS
           5C-B1]
          Length = 137

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           I E+  +F D  +I  +N EY G D  T+V++F   +   D  +    GDIV++ + +  
Sbjct: 34  IGEVGYMFVDDKKILEVNNEYLGHDYYTDVITFD--YDEGDTVN----GDIVISLDTVRT 87

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
            A + GK +E  L  +IIHG LHL G   ++DK     E +E +
Sbjct: 88  NAELFGKTYEEELHRVIIHGILHLCG---INDKGPGEREQMEAA 128


>gi|116626740|ref|YP_828896.1| hypothetical protein Acid_7712 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|123124469|sp|Q01P09|RRMF_SOLUE RecName: Full=Probable rRNA maturation factor
 gi|116229902|gb|ABJ88611.1| protein of unknown function UPF0054 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 147

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  LN ++R  D  T+VLSFP+            LGD+ ++      +A   G   E  +
Sbjct: 50  LRRLNRDFRKKDYATDVLSFPSGGPG--------LGDLAISLGRARAQAREFGHTIEQEI 101

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             L++HG LHLLG+DH  + D   M  LE+     LG+
Sbjct: 102 SILMLHGVLHLLGHDH--EVDRGRMASLEKRWRAKLGL 137


>gi|254526914|ref|ZP_05138966.1| hypothetical protein P9202_1567 [Prochlorococcus marinus str. MIT
           9202]
 gi|221538338|gb|EEE40791.1| hypothetical protein P9202_1567 [Prochlorococcus marinus str. MIT
           9202]
          Length = 179

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 1/117 (0%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-DGCSSLMLGDIV 105
            Y  ++    L L    +  I +LN ++   + PT+VLSFP     S +    + LGDI 
Sbjct: 62  NYIFEKKSFSLGLQIISNQEIASLNMKWMQKNGPTDVLSFPIISDESLNNLDHIELGDIF 121

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +++E+   ++          ++ L  HGFLHLLG++H ++ D   M   +  ++  L
Sbjct: 122 ISFEMALEQSYEYKHSIYREMIWLASHGFLHLLGWEHNNENDLENMLNFQEYLITRL 178


>gi|126695540|ref|YP_001090426.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9301]
 gi|166227511|sp|A3PAQ0|RRMF_PROM0 RecName: Full=Probable rRNA maturation factor
 gi|126542583|gb|ABO16825.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9301]
          Length = 179

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 31  LCEVVFAKAVSNLISK------GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
             E VF   ++ ++ K       Y  ++    L L    +  I +LN ++   + PT+VL
Sbjct: 40  FWEKVFLSWINTILKKEDYELPNYIFEKKSFSLGLQIISNQEIASLNKKWMQKNGPTDVL 99

Query: 85  SFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           SFP     S +    + LGDI ++ E+   ++          ++ L  HGFLHLLG++H 
Sbjct: 100 SFPIISDESLNNLDHIELGDIFISLEMALEQSYEYKNSIYREMIWLASHGFLHLLGWEHN 159

Query: 144 DDKDACVMEGLERSILEDL 162
           ++ D   M   +  +++ L
Sbjct: 160 NEHDLENMLNFQEYLIKKL 178


>gi|303253550|ref|ZP_07339688.1| hypothetical protein APP2_0738 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302647470|gb|EFL77688.1| hypothetical protein APP2_0738 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 409

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 12/122 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVF--AKAVSNLISKGYFVKENIVELSLVFTD 63
           +  P +DLQIA EN+      +L +L ++      A++       F +    E+++   D
Sbjct: 1   MTTPMIDLQIACENSE-----NLPSLEQLTLWVQTALAYEAQTEDFPE---TEMTIRIVD 52

Query: 64  SHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
                 LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E
Sbjct: 53  EAESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLE 110

Query: 124 NH 125
           +H
Sbjct: 111 SH 112


>gi|190150279|ref|YP_001968804.1| hypothetical protein APP7_1010 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307245863|ref|ZP_07527948.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|307254836|ref|ZP_07536662.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307259278|ref|ZP_07541007.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|307263620|ref|ZP_07545232.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
 gi|189915410|gb|ACE61662.1| hypothetical protein APP7_1010 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306853223|gb|EFM85443.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|306862207|gb|EFM94175.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306866645|gb|EFM98504.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|306871043|gb|EFN02775.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
          Length = 409

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 12/122 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVF--AKAVSNLISKGYFVKENIVELSLVFTD 63
           +  P +DLQIA EN+      +L +L ++      A++       F +    E+++   D
Sbjct: 1   MTTPMIDLQIACENSE-----NLPSLEQLTLWVQTALAYEAQTEDFPE---TEMTIRIVD 52

Query: 64  SHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
                 LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E
Sbjct: 53  EAESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLE 110

Query: 124 NH 125
           +H
Sbjct: 111 SH 112


>gi|32035698|ref|ZP_00135586.1| COG1444: Predicted P-loop ATPase fused to an acetyltransferase
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208433|ref|YP_001053658.1| hypothetical protein APL_0957 [Actinobacillus pleuropneumoniae L20]
 gi|126097225|gb|ABN74053.1| hypothetical protein APL_0957 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 409

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 12/122 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVF--AKAVSNLISKGYFVKENIVELSLVFTD 63
           +  P +DLQIA EN+      +L +L ++      A++       F +    E+++   D
Sbjct: 1   MTTPMIDLQIACENSE-----NLPSLEQLTLWVQTALAYEAQTEDFPE---TEMTIRIVD 52

Query: 64  SHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
                 LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E
Sbjct: 53  EAESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLE 110

Query: 124 NH 125
           +H
Sbjct: 111 SH 112


>gi|317504317|ref|ZP_07962304.1| metal dependent hydrolase [Prevotella salivae DSM 15606]
 gi|315664568|gb|EFV04248.1| metal dependent hydrolase [Prevotella salivae DSM 15606]
          Length = 162

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 6/104 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++  +F D  +I  +N EY G D  T++++F   +   D    ++ GD+V++ + ++  A
Sbjct: 55  DIGYMFVDDAKILQVNNEYLGHDYYTDIITFD--YDEDD----IVSGDLVISIDTVKSNA 108

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            + GKE+E+ L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 109 ELFGKEYEDELHRVIIHGILHLCGINDKGPGEREIMEANENKAL 152


>gi|255030168|ref|ZP_05302119.1| putative metalloprotease [Listeria monocytogenes LO28]
          Length = 86

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 41/69 (59%)

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +  MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +  VM GL++
Sbjct: 17  TPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQK 76

Query: 157 SILEDLGIN 165
            +L+  G+ 
Sbjct: 77  EVLDAYGLE 85


>gi|149177587|ref|ZP_01856189.1| hypothetical protein PM8797T_00232 [Planctomyces maris DSM 8797]
 gi|148843567|gb|EDL57928.1| hypothetical protein PM8797T_00232 [Planctomyces maris DSM 8797]
          Length = 165

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 24/167 (14%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
            QI ++N+    + HL  + E     A+S L+        N  E+SL   D+  I  LN 
Sbjct: 7   FQIEIQNS----QTHL-AIDETQLKTAISFLLQSEQV---NQAEISLAIVDNPTIRQLNQ 58

Query: 73  EYRGIDKPTNVLSF----PTAFASSD----GCSSLMLGDIVLAYEIIEIEANVLGKEF-- 122
           +Y   D  T+VLSF     TA  ++     G    + G+++++ E+    A  +  E+  
Sbjct: 59  QYLEHDYDTDVLSFLLDCDTAMDTNQVEFRGAGRQIEGEVIVSAEM----AVAMSAEYQW 114

Query: 123 --ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
             E  L+  +IHG LHL GYD + +++  +M   E+ I +   I+ P
Sbjct: 115 PAEQELLLYVIHGLLHLCGYDDLTEEELHIMRQREQQIFDHWQISIP 161


>gi|126314349|ref|XP_001365786.1| PREDICTED: similar to C21orf57 isoform A protein [Monodelphis
           domestica]
          Length = 166

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L +V  D+  I+ LN  YR    PT+VLSFP        A    +    L LGDI L  
Sbjct: 36  DLGVVCVDNQGIQRLNRIYRQAHGPTDVLSFPFHEDLRAGAVPQPECPDDLNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E I  +    G+ + + L     HG  HLLGY H    +   M   E+  LE+L
Sbjct: 96  EYIFHQCQENGENYYDILTVTAAHGLCHLLGYKHNTAAEWREMFQKEKLTLEEL 149


>gi|268315812|ref|YP_003289531.1| hypothetical protein Rmar_0237 [Rhodothermus marinus DSM 4252]
 gi|262333346|gb|ACY47143.1| protein of unknown function UPF0054 [Rhodothermus marinus DSM 4252]
          Length = 146

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 5/114 (4%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K  +  LSLV TD   +  LN  Y G D  T+VLSFP   +   G   ++ G+I +  + 
Sbjct: 37  KARLRYLSLVLTDHATVRELNRTYLGHDYDTDVLSFP--LSEEPG---VVEGEIYVDLDT 91

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
                   G  F       ++HG LHLLGYD    +    M  LE   L+  G+
Sbjct: 92  AAERHAEFGATFTQEACRYVVHGLLHLLGYDDATPEARAHMHRLEDRYLQAAGL 145


>gi|317968159|ref|ZP_07969549.1| metal-dependent hydrolase [Synechococcus sp. CB0205]
          Length = 187

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 15/118 (12%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--------------FASSDGC-SSLML 101
           L L   +   I  LN ++R  +  T+VL+F                 F   +G   +L L
Sbjct: 64  LGLSLVNDEEIAALNSDWRDKEGATDVLAFAAQDDGLDDAPAIPMPDFDGEEGLLDALEL 123

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           GDIV++ E    +A   G      L+ L  HG LHLLG+DH DD     M   ++ +L
Sbjct: 124 GDIVISVETAARQAPEHGHNLREELLFLATHGLLHLLGWDHPDDASLEAMLQRQQQLL 181


>gi|328955428|ref|YP_004372761.1| protein of unknown function UPF0054 [Coriobacterium glomerans PW2]
 gi|328455752|gb|AEB06946.1| protein of unknown function UPF0054 [Coriobacterium glomerans PW2]
          Length = 187

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 8/97 (8%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGC-SSLMLGDIVL 106
           VELS+ F  +  +  LN  +RGID+PT+VLSF         + A   GC   L LGD++L
Sbjct: 39  VELSVSFVGASEMRDLNRSWRGIDEPTDVLSFECDRPDSKDSLAGRPGCEQPLELGDVIL 98

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           A EII  +A        +    +++HG LHLLG+DH+
Sbjct: 99  APEIIAAQATGFKNTAADECRLMLVHGLLHLLGWDHI 135


>gi|254442036|ref|ZP_05055512.1| conserved hypothetical protein TIGR00043, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198256344|gb|EDY80652.1| conserved hypothetical protein TIGR00043, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 158

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIE 114
           ELS+ F D   I  L+ ++     PT+V++FP       G       G+I++  ++ +  
Sbjct: 46  ELSIAFVDKDYIAQLHDQFMDDPTPTDVITFP-------GDPDFDQAGEIIVCPQVAQEY 98

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           A      F + L   +IHG+LHL G+D + D D   M   E+  LE
Sbjct: 99  AQKANLSFSDELGLYLIHGYLHLCGFDDIADSDRAQMRLAEQQALE 144


>gi|288800393|ref|ZP_06405851.1| metalloprotease [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332606|gb|EFC71086.1| metalloprotease [Prevotella sp. oral taxon 299 str. F0039]
          Length = 138

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEI 110
           + + ++  +F D  +I  +N EY   D  T++++F       D C +  L GD+V++ + 
Sbjct: 32  KKVGDIGYMFVDDEKILEVNREYLQHDYYTDIITF-------DYCENDELNGDLVISLDT 84

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   A + GK +E  L  +IIHG LHL+G +     +  +ME  E   L
Sbjct: 85  VRTNAELFGKTYEEELYRVIIHGVLHLIGINDKGPGEREIMEAAENKAL 133


>gi|307128532|ref|YP_003880562.1| hypothetical protein SMCARI_030 [Candidatus Sulcia muelleri CARI]
 gi|306482994|gb|ADM89864.1| conserved hypothetical protein [Candidatus Sulcia muelleri CARI]
          Length = 141

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 11/137 (8%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  +  + HL    E++F+K +  ++SK    K+NI EL+ +F D + +  +N +Y   +
Sbjct: 3   NYYYETKFHLYN--EILFSKFIFFVVSKE---KKNIKELNFIFCDDNYLININKKYINKN 57

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
             T+V++F      +      + GDI L+ + I+  +    K F N L  ++IH  LHL+
Sbjct: 58  NYTDVITFENYENKN------LYGDIFLSIKRIKYNSFKFKKLFFNELKRVMIHAVLHLI 111

Query: 139 GYDHVDDKDACVMEGLE 155
           GY   +  +  +M   E
Sbjct: 112 GYKDKNKFEKKIMYKKE 128


>gi|297708196|ref|XP_002830862.1| PREDICTED: putative metalloprotease C21orf57-like isoform 1 [Pongo
           abelii]
 gi|297708198|ref|XP_002830863.1| PREDICTED: putative metalloprotease C21orf57-like isoform 2 [Pongo
           abelii]
          Length = 167

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIFLGV 95

Query: 109 EII--EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I  + + N   +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 96  EYIFHQCQEN---EDYNDVLTVTATHGLCHLLGFTHSTEAEWQQMFQKEKAVLDELG 149


>gi|119952863|ref|YP_945072.1| putative metalloprotease [Borrelia turicatae 91E135]
 gi|254799885|sp|A1QYL0|RRMF_BORT9 RecName: Full=Probable rRNA maturation factor
 gi|119861634|gb|AAX17402.1| hypothetical metal-binding protein [Borrelia turicatae 91E135]
          Length = 148

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS++  ++  I+ LN ++R   +PT+VLSF      S      + GD++++ E +E  +
Sbjct: 38  ELSVILCNNEYIQKLNSQFRQKSEPTDVLSF-NYLEESGQIDHKIQGDLIISLEYLEFSS 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
                E  + L    IHG LHL+GY H
Sbjct: 97  LEFNVELYDELQRNTIHGILHLIGYTH 123


>gi|78778570|ref|YP_396682.1| hypothetical protein PMT9312_0184 [Prochlorococcus marinus str. MIT
           9312]
 gi|123554741|sp|Q31CZ9|RRMF_PROM9 RecName: Full=Probable rRNA maturation factor
 gi|78712069|gb|ABB49246.1| Protein of unknown function UPF0054 [Prochlorococcus marinus str.
           MIT 9312]
          Length = 179

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)

Query: 31  LCEVVFAKAVSNLISKG------YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
             E VF   ++ ++ K       Y  ++    L L    +  I +LN ++   + PT+VL
Sbjct: 40  FWEKVFLSWINTILKKEDYELPYYIFEKKSFSLGLQIISNQEIASLNKKWMQKNGPTDVL 99

Query: 85  SFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           SFP     S +    + LGDI ++ E+   ++          ++ L  HGFLHLLG++H 
Sbjct: 100 SFPIISDESLNNLDQIELGDIFISLEMALEQSYEYKHSIYREMIWLASHGFLHLLGWEHN 159

Query: 144 DDKDACVMEGLERSILEDLG 163
           ++ D   M   +  ++  L 
Sbjct: 160 NEHDLENMLNFQEYLITRLN 179


>gi|224437000|ref|ZP_03657981.1| putative metalloprotease [Helicobacter cinaedi CCUG 18818]
 gi|313143472|ref|ZP_07805665.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313128503|gb|EFR46120.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 202

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 23/130 (17%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSS----------- 98
           L +VF DS  +  +N  +RG    T+VLSFP         FA  D   S           
Sbjct: 48  LEVVFVDSKTMREINRTHRGKLSTTDVLSFPLECDFMACDFAEGDFMESDFDFSPLDSTA 107

Query: 99  ---LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
               +LG IV+  E+ +  +        + +  L IHGFLH+LG+DH  + D      LE
Sbjct: 108 PFERLLGSIVINTELAKAMSESYNHTLIDEISLLFIHGFLHILGFDH--EVDNGEQRALE 165

Query: 156 RSILEDLGIN 165
           + I+E +G+ 
Sbjct: 166 QCIIESIGLK 175


>gi|327260856|ref|XP_003215249.1| PREDICTED: rRNA maturation factor homolog isoform 1 [Anolis
           carolinensis]
 gi|327260858|ref|XP_003215250.1| PREDICTED: rRNA maturation factor homolog isoform 2 [Anolis
           carolinensis]
          Length = 165

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 15/119 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----------TAFASSDGCSSLMLGDI 104
           +L ++   +  I+ LN  YR  + PT+VLSFP             FA  +      LGDI
Sbjct: 36  DLGVICVSNRHIQQLNRCYRQKNIPTDVLSFPFHENLKAGELPQHFAQDE----YNLGDI 91

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
            L  E I  +     +++ N L   + HG  HLLGY H    D   M   E  IL++L 
Sbjct: 92  FLGVEYIYQQCVHYNEDYYNILTVTVAHGLCHLLGYKHSTKADWEEMYKKEAQILQELS 150


>gi|149369359|ref|ZP_01889211.1| hypothetical protein SCB49_06027 [unidentified eubacterium SCB49]
 gi|149356786|gb|EDM45341.1| hypothetical protein SCB49_06027 [unidentified eubacterium SCB49]
          Length = 138

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S +F D   +  LN ++   D  T+V+SF  +  +       + G+I ++ E +   A
Sbjct: 35  EVSYIFCDDAYLHKLNVQFLDHDTLTDVISFDNSLGTQ------VHGEIYISVERVRENA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
                 FE+ L  +IIHG LH  GY    D++A +M   E   L
Sbjct: 89  KEFSDSFEDELHRVIIHGLLHFCGYKDKTDEEAAMMRSKENEAL 132


>gi|157273353|gb|ABV27252.1| conserved hypothetical protein [Candidatus Chloracidobacterium
           thermophilum]
          Length = 175

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 20/111 (18%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-----PTAFASSDGCSSL---------- 99
           V+++LVF   + +  LN  YRG+D PT+VLSF     P+ +                   
Sbjct: 38  VDVNLVFVGDNAMRRLNHIYRGVDAPTDVLSFVHLELPSPYTHRRAQREAWFFSRPETGL 97

Query: 100 -----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                +LG++++A       A          +  L+IHG +HL GYDH  D
Sbjct: 98  DEEPPLLGEVIIATPTARRYAERHALTCAEEIQRLVIHGIIHLCGYDHETD 148


>gi|116004463|ref|NP_001070588.1| rRNA maturation factor homolog [Bos taurus]
 gi|81673818|gb|AAI09796.1| Hypothetical protein MGC134244 [Bos taurus]
 gi|296490846|gb|DAA32959.1| hypothetical protein LOC768063 [Bos taurus]
          Length = 164

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 14/116 (12%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAYE 109
           L +V  D+ +I+ +N  YR  D PT+VLSFP             D      LGDI L  E
Sbjct: 37  LGVVCVDNRKIQQMNRIYREQDTPTDVLSFPFHENLKAGEIPQPDFPDDYNLGDIFLGVE 96

Query: 110 IIEIEANVLGKEFENH---LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            I  +     KE E++   L     HG  HLLG+ H  + +   M   E+ +L++L
Sbjct: 97  FIFQQC----KEDEDYYDILTVTATHGLCHLLGFTHSTEAEWQKMYQKEKQVLQEL 148


>gi|307261440|ref|ZP_07543111.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|306868835|gb|EFN00641.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
          Length = 405

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E
Sbjct: 40  TEMTIRIVDEAESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKE 97

Query: 115 ANVLGKEFENH 125
                   E+H
Sbjct: 98  VEEQQISLESH 108


>gi|240047404|ref|YP_002960792.1| putative metalloprotease mhp224 [Mycoplasma conjunctivae HRC/581]
 gi|239984976|emb|CAT04969.1| Putative metalloprotease mhp224 [Mycoplasma conjunctivae]
          Length = 150

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEANVLG 119
           F +++ ++ +   Y+  D   +VLSFP    +      L  +G+I++  E I  +A    
Sbjct: 44  FVEANYMQKMCKTYKNKDYIADVLSFPDFLVNKQNGKKLAFIGEILMCPETIYYQAQSYQ 103

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              +    ++  H   HLL YDH+D+++A +M      I++ + I
Sbjct: 104 HTNKREFCYMFTHSVFHLLNYDHIDEQEAKIMHEKVEKIMQKMEI 148


>gi|307250205|ref|ZP_07532161.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|306857734|gb|EFM89834.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
          Length = 405

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E
Sbjct: 40  TEMTIRIVDEAESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKE 97

Query: 115 ANVLGKEFENH 125
                   E+H
Sbjct: 98  VEEQQISLESH 108


>gi|226355982|ref|YP_002785722.1| metal-dependent hydrolase (metalloprotease) [Deinococcus deserti
           VCD115]
 gi|226317972|gb|ACO45968.1| putative metal-dependent hydrolase (metalloprotease) [Deinococcus
           deserti VCD115]
          Length = 155

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++V      I  L  E+   D  T+VLSFPT +   D      LGDIV++ +    +A
Sbjct: 35  EVTVVLVGDRAIRALKLEHWDEDAATDVLSFPT-WEPGDPFVPPHLGDIVISLDTARRQA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +  G      +  L  HG  HL G+DH
Sbjct: 94  DARGHSLTREVALLASHGMTHLTGHDH 120


>gi|307247949|ref|ZP_07529982.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|306855553|gb|EFM87723.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
          Length = 405

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+++   D      LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E
Sbjct: 40  TEMTIRIVDEAESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKE 97

Query: 115 ANVLGKEFENH 125
                   E+H
Sbjct: 98  VEEQQISLESH 108


>gi|226443168|ref|NP_001140067.1| metalloprotease C21orf57 [Salmo salar]
 gi|221221630|gb|ACM09476.1| metalloprotease C21orf57 [Salmo salar]
          Length = 168

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CS----SLMLGDIVLAY 108
           +L ++  D+ +I+ +N  YR  + PT+VLSFP       G   C      L LGDI L  
Sbjct: 36  DLGVICVDNRKIQRINNIYRKKNMPTDVLSFPFYEELRPGKLPCPLYRDELNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E +  +     ++    L  +  HG  HLLGY H  +++   M   E  IL + 
Sbjct: 96  EYVMKQCQQQSQDLHGILTSVTAHGICHLLGYRHETEEEWKEMLQKESYILNEF 149


>gi|163754568|ref|ZP_02161690.1| glutamyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161325509|gb|EDP96836.1| glutamyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 140

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 6/105 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++ +F D   +  LN E+   D  T+++SF  +  +       + GDI ++ E +   A
Sbjct: 35  EINYIFCDDEYLHKLNVEFLNHDTLTDIISFDNSLGNQ------LHGDIFISVERVADNA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           N     FE  L  ++IHG LH  GY    D+D   M   E   L+
Sbjct: 89  NDFKVSFEEELRRVMIHGILHYCGYKDKTDEDQAEMTAKENEKLQ 133


>gi|332300776|ref|YP_004442697.1| metalloprotease ybeY [Porphyromonas asaccharolytica DSM 20707]
 gi|332177839|gb|AEE13529.1| metalloprotease ybeY [Porphyromonas asaccharolytica DSM 20707]
          Length = 175

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           +   + E++  +TD   I   N  +   D  T+V++FP    S      ++ GDI+++ +
Sbjct: 32  MNRTVGEINFQYTDDEGILRANRAFLQHDYYTDVITFPRE--SEQEGDDVIYGDILISID 89

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE-RSILE 160
            +   A  LG  F+  L  ++IHG LHLLG D   D +  +M   E R++++
Sbjct: 90  TVATNAQELGVPFQQELYRVMIHGILHLLGIDDQTDSERELMHMAEDRALMQ 141


>gi|309807569|ref|ZP_07701521.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           01V1-a]
 gi|308169175|gb|EFO71241.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           01V1-a]
          Length = 92

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 39/64 (60%)

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           +GD+ +  E++E  A      F     + ++HG+LHL GYDH+ D +A VM G++  +LE
Sbjct: 15  IGDLFICPEVVEKHATEYETGFYREFGYTLVHGYLHLNGYDHIKDDEAEVMFGIQSKVLE 74

Query: 161 DLGI 164
           + G+
Sbjct: 75  EYGL 78


>gi|320334941|ref|YP_004171652.1| metalloprotease ybeY [Deinococcus maricopensis DSM 21211]
 gi|319756230|gb|ADV67987.1| metalloprotease ybeY [Deinococcus maricopensis DSM 21211]
          Length = 157

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++++V      I  L  E+ G D  T+VLSFPT F   D      LGDIV++ +    +A
Sbjct: 37  DVTVVLVGDRAIRALKREHWGEDAATDVLSFPT-FVPGDPFVPPHLGDIVISLDTAARQA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
              G      +  L  H   HL+G+DH
Sbjct: 96  GARGHSLAREVALLASHAVTHLVGHDH 122


>gi|260655935|ref|ZP_05861404.1| putative metalloprotease [Jonquetella anthropi E3_33 E1]
 gi|260629551|gb|EEX47745.1| putative metalloprotease [Jonquetella anthropi E3_33 E1]
          Length = 171

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 13/120 (10%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-------CSSLMLGDIVLA 107
           +E+SL F D   +  LN +YRG ++PT+VLSFP     +DG          L LGD+V  
Sbjct: 48  LEISLQFLDEEAMAALNGQYRGENRPTDVLSFP--LWENDGHLELPPSGGVLPLGDLVFC 105

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDA---CVMEGLERSILEDLG 163
             ++E  A   G   ++ L  L+ HG LHL+ +DH  +++ A    V E   + ILE  G
Sbjct: 106 RPVLEANAAAAGTSVQSELALLLAHGALHLIAWDHDTEERRAAMWAVQERYRQRILERAG 165


>gi|330813322|ref|YP_004357561.1| metal-dependent hydrolase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486417|gb|AEA80822.1| metal-dependent hydrolase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 98

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 10/99 (10%)

Query: 67  IETLNFEYRGIDKPTNVLSFP----TAFASSD--GCSSLMLGDIVLAYEIIEIEANVLGK 120
           ++ LN ++R I K T+VLSFP      F        +++ LGD+  +Y+ I+ +      
Sbjct: 1   MKKLNKDFRRILKDTDVLSFPHHEKNFFLKRKLPTVNNIYLGDLAFSYDYIKKQKT---- 56

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            F  ++  + IHG LHL+GY+H + K+   M  LER +L
Sbjct: 57  NFVEYVNKIFIHGCLHLVGYEHDNLKNYKEMHSLERKLL 95


>gi|157412539|ref|YP_001483405.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9215]
 gi|166980256|sp|A8G2I8|RRMF_PROM2 RecName: Full=Probable rRNA maturation factor
 gi|157387114|gb|ABV49819.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9215]
          Length = 179

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 31  LCEVVFAKAVSNLISK------GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
             E VF   ++ ++ K       Y  ++    L L    +  I +LN ++   + PT+VL
Sbjct: 40  FWEKVFLSWINIILKKKDYELPNYISEKKSFSLGLRIISNQEIASLNKKWMQKNGPTDVL 99

Query: 85  SFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           SFP     S +    + LGDI ++ E+   ++          ++ L  HGFLHLLG++H 
Sbjct: 100 SFPIISDESLNNLDHIELGDIFISLEMALEQSYEYKHTIYREMIWLASHGFLHLLGWEHN 159

Query: 144 DDKDACVMEGLERSILEDL 162
           ++ D   M  L+  ++  L
Sbjct: 160 NENDLENMLNLQEYLITRL 178


>gi|332872338|ref|XP_001145583.2| PREDICTED: rRNA maturation factor homolog isoform 1 [Pan
           troglodytes]
 gi|332872340|ref|XP_003319177.1| PREDICTED: rRNA maturation factor homolog isoform 2 [Pan
           troglodytes]
          Length = 167

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRVYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIFLGV 95

Query: 109 EII--EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I  + + N   +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 96  EYIFHQCKEN---EDYNDILTVTATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 149


>gi|321311000|ref|YP_004193329.1| hypothetical protein HF1_14820 [Mycoplasma haemofelis str. Langford
           1]
 gi|319802844|emb|CBY93490.1| conserved hypothetical protein [Mycoplasma haemofelis str. Langford
           1]
          Length = 132

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           +A+   +   + + +  VEL++V  +   I +LN  YR  DK T+VLSFP    S +   
Sbjct: 22  EAIYAHLKDRFLIPDCEVELAIV--NEEEIRSLNATYRNQDKVTDVLSFPVKTESHER-- 77

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
              LG I   Y  + I  N   ++F +   +L IH FLHLLGY+H
Sbjct: 78  --FLGAIYFCYSEV-INRN---EDFLSGFCYLFIHSFLHLLGYEH 116


>gi|281422349|ref|ZP_06253348.1| putative metalloprotease [Prevotella copri DSM 18205]
 gi|281403580|gb|EFB34260.1| putative metalloprotease [Prevotella copri DSM 18205]
          Length = 144

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+  +F D  +I  +N EY G D  T+V++F   +   D    ++ GDIV++ + +   A
Sbjct: 36  EIGYMFVDDEKILEVNNEYLGHDYYTDVITFD--YDEDD----VINGDIVISLDTVRTNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
              GK +++ L  +IIHG LHL G   ++DK        ER I+E+
Sbjct: 90  EQFGKTYDDELHRVIIHGILHLCG---INDKGPG-----EREIMEE 127


>gi|332519443|ref|ZP_08395910.1| protein of unknown function UPF0054 [Lacinutrix algicola 5H-3-7-4]
 gi|332045291|gb|EGI81484.1| protein of unknown function UPF0054 [Lacinutrix algicola 5H-3-7-4]
          Length = 136

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 50  VKENIVE--LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLA 107
           ++EN +E  ++ VF D   +  LN E+   D  T+++SF  +   +      + GDI ++
Sbjct: 27  LQENCIEEEINYVFCDDEYLHKLNVEFLNHDTLTDIISFDYSVGKN------LQGDIFIS 80

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            E +E  A      FE  L  +++HG LH  GY    D +A +M   E   L
Sbjct: 81  TERVEDNAKDFNVSFETELQRVLVHGILHYCGYKDKSDSEAKLMREKENFYL 132


>gi|288925424|ref|ZP_06419358.1| metalloprotease [Prevotella buccae D17]
 gi|288337895|gb|EFC76247.1| metalloprotease [Prevotella buccae D17]
          Length = 139

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 12/133 (9%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           ++R      + KAV+    +       + E+  +F D  +I  +N EY G D  T++++F
Sbjct: 13  NIRKRTVSAWIKAVAATFGR------KVGEIGYMFVDDEKILEVNNEYLGHDYYTDIITF 66

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
              +   D  S    GD+V++ + +   A   GK++   L  +IIHG LHL G +     
Sbjct: 67  D--YDEGDTIS----GDLVISLDTVRTNAEKFGKDYNEELHRVIIHGILHLCGINDKGPG 120

Query: 147 DACVMEGLERSIL 159
           +  +ME  E   L
Sbjct: 121 EREIMEAHENKAL 133


>gi|331698255|ref|YP_004334494.1| metalloprotease ybeY [Pseudonocardia dioxanivorans CB1190]
 gi|326952944|gb|AEA26641.1| metalloprotease ybeY [Pseudonocardia dioxanivorans CB1190]
          Length = 178

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLA 107
           VEL++    +  +  L+  +     PT+V++FP       T    +      +LGD+VL 
Sbjct: 35  VELAITAVTTEAMSELHERWMDEPGPTDVMAFPMDELAEETRRPDAPDIGPALLGDVVLC 94

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
                 +A   G    + L  L +HG LHLLGYDH + +    M  L+  +L
Sbjct: 95  PAFARDQARKAGHGLPDELHLLTVHGVLHLLGYDHAEPEQEREMFSLQDRLL 146


>gi|54607072|ref|NP_478061.1| rRNA maturation factor homolog isoform 1 [Homo sapiens]
 gi|47117865|sp|P58557|YBEY_HUMAN RecName: Full=rRNA maturation factor homolog
 gi|119629693|gb|EAX09288.1| chromosome 21 open reading frame 57, isoform CRA_a [Homo sapiens]
 gi|119629696|gb|EAX09291.1| chromosome 21 open reading frame 57, isoform CRA_a [Homo sapiens]
          Length = 167

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIFLGV 95

Query: 109 EII--EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I  + + N   +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 96  EYIFHQCKEN---EDYNDVLTVTATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 149


>gi|212703304|ref|ZP_03311432.1| hypothetical protein DESPIG_01347 [Desulfovibrio piger ATCC 29098]
 gi|212673264|gb|EEB33747.1| hypothetical protein DESPIG_01347 [Desulfovibrio piger ATCC 29098]
          Length = 143

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE  LV  D   I   N  Y G   PTNVLSFP       G  SL  G ++L+ + +  E
Sbjct: 45  VETHLV--DDACIARANQRYMGCTGPTNVLSFP-------GDESLP-GVMLLSLDTLNRE 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
             + G++   HL+ L+ H   HL GYDH ++ DA
Sbjct: 95  CLLYGQDPAEHLLRLLAHSVGHLAGYDHGEEMDA 128


>gi|313886905|ref|ZP_07820608.1| translation metalloprotein YbeY [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923602|gb|EFR34408.1| translation metalloprotein YbeY [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 175

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           +   + E++  +TD   I   N  +   D  T+V++FP    S       + GDI+++ +
Sbjct: 32  MNRTVGEINFQYTDDEGILRANRAFLQHDYYTDVITFPRE--SEQEGDDAIYGDILISID 89

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE-RSILE 160
            +   A  LG  F+  L  ++IHG LHLLG D   D +  +M   E R++++
Sbjct: 90  TVATNAQELGVPFQQELYRVMIHGILHLLGIDDQTDSERELMHMAEDRALMQ 141


>gi|312890776|ref|ZP_07750306.1| protein of unknown function UPF0054 [Mucilaginibacter paludis DSM
           18603]
 gi|311296739|gb|EFQ73878.1| protein of unknown function UPF0054 [Mucilaginibacter paludis DSM
           18603]
          Length = 142

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           +I++GY +KE    L+ +F     +  LN +Y   D  T++++F  +   S+G   +++G
Sbjct: 30  VIAEGYKLKE----LNYIFCSDRYLIELNQQYLNHDTYTDIITFDNS--ESEG---IVIG 80

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI ++ E I+  A++        L  +IIHG LHLLGY      D  +M   E   L  L
Sbjct: 81  DIFISVERIKENASLFSVSEAEELHRVIIHGVLHLLGYKDKTKSDKALMTSKENLYLSQL 140

Query: 163 GI 164
            +
Sbjct: 141 SV 142


>gi|297287364|ref|XP_002803146.1| PREDICTED: putative metalloprotease C21orf57-like [Macaca mulatta]
          Length = 167

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YRG + PT+VLSFP         F   +      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRIYRGRNVPTDVLSFPFHEHLKAGEFPLPEFPDDYNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I  +     +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 96  EYIFHQCKE-DEDYNDVLTVTATHGLCHLLGFTHSTEAEWQQMFQKEKAVLDELG 149


>gi|149546328|ref|XP_001514071.1| PREDICTED: similar to C21orf57 isoform A protein [Ornithorhynchus
           anatinus]
          Length = 165

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L +V  D+  I+ +N  YR  + PT+VLSFP                    LGD+ L  
Sbjct: 36  DLGIVCVDNKNIQRVNNTYRQKNVPTDVLSFPFHENLKAGEMPQPRFPEDYNLGDVFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E I  +     ++F   L  +  HG  HLLGY H  + +   M   E+ IL++L
Sbjct: 96  EYIFQQCQEGNEDFYGVLTVIAAHGLCHLLGYRHDTEAEWQEMYQKEKHILDEL 149


>gi|301604850|ref|XP_002932054.1| PREDICTED: putative metalloprotease C21orf57-like [Xenopus
           (Silurana) tropicalis]
          Length = 165

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 13/118 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----------TAFASSDGCSSLMLGDIV 105
           +L ++   + RI  +N  YRG D  T+VLSFP             ASSD      LGDI 
Sbjct: 36  DLGIICVSNARIRHINRVYRGQDSVTDVLSFPFHEDLNPSLLPIPASSD---EYNLGDIY 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           L  E I  +     +++ + L    +HG  HLLG+ H + +    M   E  IL+++ 
Sbjct: 93  LGVEFIYQQCQKTQEDYSSILTICAVHGLCHLLGHQHNNPEQWKQMLEKETEILKEIN 150


>gi|260591891|ref|ZP_05857349.1| putative metalloprotease [Prevotella veroralis F0319]
 gi|260536175|gb|EEX18792.1| putative metalloprotease [Prevotella veroralis F0319]
          Length = 143

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+  +F D  +I  +N EY G D  T++++F   +   D    ++ GD+V++ + +   A
Sbjct: 36  EIGYMFVDDEKILEVNNEYLGHDYYTDIITFD--YDEGD----VLNGDLVISLDTVRSNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            + GK +E  L  +IIHG LHL G   ++DK        ER I+E+
Sbjct: 90  ELFGKLYEEELFRVIIHGILHLCG---INDKGPG-----EREIMEE 127


>gi|332291816|ref|YP_004430425.1| protein of unknown function UPF0054 [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169902|gb|AEE19157.1| protein of unknown function UPF0054 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 135

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           ++ + E++ +F D   +  LN EY   D  T+V+SF   + S D  S    GD+ ++ E 
Sbjct: 30  QKQMGEINYIFCDDAYLHKLNVEYLNHDTLTDVISFD--YTSGDVIS----GDVYISVER 83

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           +E  A      F++ L  +++HG LH  GY    D +A  M   E
Sbjct: 84  VEDNAADFKTSFKDELSRVMVHGLLHYCGYKDKSDDEAKEMRAKE 128


>gi|317125261|ref|YP_004099373.1| hypothetical protein Intca_2136 [Intrasporangium calvum DSM 43043]
 gi|315589349|gb|ADU48646.1| protein of unknown function UPF0054 [Intrasporangium calvum DSM
           43043]
          Length = 155

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            +L +   D   +  L+ ++  +  PT+V+SFP                 LGDIVL   +
Sbjct: 35  ADLCIKLVDEPAMSVLHEQWMDLPGPTDVMSFPMDELRPGREGQEPEEGTLGDIVLCPSV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLGYDH +  +   M  L+R +L
Sbjct: 95  ATRQAAEAGHAPMEEMLLLTTHGILHLLGYDHAEPDEEREMFELQRQLL 143


>gi|269215613|ref|ZP_06159467.1| cupin domain protein [Slackia exigua ATCC 700122]
 gi|269131100|gb|EEZ62175.1| cupin domain protein [Slackia exigua ATCC 700122]
          Length = 185

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 13/102 (12%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----AFASSD---GCS-----SLML 101
            E S+ F     I  LN E+RGID+PT+VLSF       AF   D   G       + +L
Sbjct: 58  TEASIAFVSDDEIRRLNAEFRGIDRPTDVLSFECDGMDDAFDEGDVFEGSGMPDEETFLL 117

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           GD+++A ++   +    G   +  L  L++HG LHL G+DHV
Sbjct: 118 GDVIIATDVARAQTERFGTTPQEELCVLLVHGLLHLCGWDHV 159


>gi|17061811|gb|AAK74138.1| C21orf57 isoform A protein [Homo sapiens]
          Length = 299

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI L  
Sbjct: 168 DLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIFLGV 227

Query: 109 EII--EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I  + + N   +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 228 EYIFHQCKEN---EDYNDVLTVTATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 281


>gi|269115217|ref|YP_003302980.1| hypothetical protein MHO_4420 [Mycoplasma hominis]
 gi|268322842|emb|CAX37577.1| Conserved hypothetical protein [Mycoplasma hominis ATCC 23114]
          Length = 150

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 1/109 (0%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-DGCSSLMLGDIVLAYEIIEIEA 115
           + ++F  + +++ LN  +R  +  T++LSFP       +    + LG I+++   I+ +A
Sbjct: 39  VDVMFVTAKKMKKLNNLHRQKNYTTDILSFPLDSQEELNFLDEIELGQIIISPWKIKKQA 98

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
                       ++  HG  HL G+DH+ +++A +M G   +I+  L I
Sbjct: 99  KEFNHSLRREFCYIFAHGIAHLFGFDHITEEEAKIMNGHVDNIMNKLNI 147


>gi|187917939|ref|YP_001883502.1| putative metalloprotease [Borrelia hermsii DAH]
 gi|238689307|sp|B2S1P5|RRMF_BORHD RecName: Full=Probable rRNA maturation factor
 gi|119860787|gb|AAX16582.1| hypothetical metal-binding protein [Borrelia hermsii DAH]
          Length = 148

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+V  ++  I+ LN  +R   +PT+VLSF      +   +  + GD++++ E +E  +
Sbjct: 38  ELSVVLCNNEYIQKLNSAFRQKSEPTDVLSF-NYLEENGQINHKIQGDLIISLEYLEFSS 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
                E  + L    IHG LHL+GY H
Sbjct: 97  LEFNVEMYDELQRNTIHGILHLIGYTH 123


>gi|298483806|ref|ZP_07001978.1| metalloprotease [Bacteroides sp. D22]
 gi|298269993|gb|EFI11582.1| metalloprotease [Bacteroides sp. D22]
          Length = 139

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIRTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +EN L  +IIHG LHL G +     +  +MEG E   L
Sbjct: 90  AEQFGTSYENELHRVIIHGILHLCGINDKGPGEREIMEGAENKAL 134


>gi|189485340|ref|YP_001956281.1| membrane-associated hydrolase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|254801664|sp|B1GZY8|RRMF_UNCTG RecName: Full=Probable rRNA maturation factor
 gi|170287299|dbj|BAG13820.1| membrane-associated hydrolase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 141

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++ +  D   I  LN +YR I + T+V+SF              +GDI ++    + +A
Sbjct: 38  QVNFIMVDDKEIRKLNTKYRKIKRITDVISFLVV-------PEFFMGDIYISKTRSQEQA 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
                 ++  L +L+IHG LHL GY   D
Sbjct: 91  KEYSNTWQQELAYLVIHGLLHLCGYTDYD 119


>gi|330998027|ref|ZP_08321858.1| translation metalloprotein YbeY [Paraprevotella xylaniphila YIT
           11841]
 gi|329569328|gb|EGG51108.1| translation metalloprotein YbeY [Paraprevotella xylaniphila YIT
           11841]
          Length = 141

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 8/109 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS-LMLGDIVLAYEI 110
           + + E++ +F D  +I  +N +Y G D  T++++F       D C   ++ GD+ ++ + 
Sbjct: 32  KRVGEIAYIFVDDEKILEVNRQYLGHDYYTDIITF-------DYCEGDVISGDLFISLDT 84

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   A  +G  +E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 85  VRTNAEQVGATYEEELHRVIIHGILHLCGINDKGPGEREIMEAAEDKAL 133


>gi|147856469|emb|CAN80775.1| hypothetical protein VITISV_042331 [Vitis vinifera]
          Length = 532

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 26/133 (19%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           RLD+ IA++ A  G       L +  +    + +   G F  EN VELS++  +   I  
Sbjct: 115 RLDVPIAMKLAFEG-------LKDSEYKTRDTTISDLGGF--EN-VELSVLLCNDEFIRK 164

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN E+R  D  T+                LMLGDIV++ E    +A   G    + +  L
Sbjct: 165 LNKEWRDEDHATD----------------LMLGDIVISVETAARQAEERGHTLLDEIRIL 208

Query: 130 IIHGFLHLLGYDH 142
           ++HG LHLLG+DH
Sbjct: 209 MVHGLLHLLGFDH 221


>gi|281424893|ref|ZP_06255806.1| putative metalloprotease [Prevotella oris F0302]
 gi|299141980|ref|ZP_07035114.1| metalloprotease [Prevotella oris C735]
 gi|281401011|gb|EFB31842.1| putative metalloprotease [Prevotella oris F0302]
 gi|298576442|gb|EFI48314.1| metalloprotease [Prevotella oris C735]
          Length = 142

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 6/104 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++  +F D  +I  +N +Y G D  T++++F   +   D    ++ GD+V++ + +   A
Sbjct: 36  DIGYMFVDDEKILEVNNDYLGHDYYTDIITFD--YDEDD----IISGDLVISLDTVRTNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              GKE+++ L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 90  EQFGKEYDDELHRVIIHGILHLCGINDKGPGEREIMEANENKAL 133


>gi|315606861|ref|ZP_07881870.1| possible metal dependent hydrolase [Prevotella buccae ATCC 33574]
 gi|315251526|gb|EFU31506.1| possible metal dependent hydrolase [Prevotella buccae ATCC 33574]
          Length = 139

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 12/133 (9%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           ++R      + KAV+    +       + E+  +F D  ++  +N EY G D  T++++F
Sbjct: 13  NIRKRTVSAWIKAVAATFGR------KVGEIGYMFVDDEKMLEVNNEYLGHDYYTDIITF 66

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
              +   D  S    GD+V++ + +   A   GK++   L  +IIHG LHL G +     
Sbjct: 67  D--YDEGDTIS----GDLVISLDTVRTNAEKFGKDYNEELHRVIIHGILHLCGINDKGPG 120

Query: 147 DACVMEGLERSIL 159
           +  +ME  E   L
Sbjct: 121 EREIMEAHENKAL 133


>gi|332881691|ref|ZP_08449339.1| translation metalloprotein YbeY [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332680330|gb|EGJ53279.1| translation metalloprotein YbeY [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 141

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 8/109 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS-LMLGDIVLAYEI 110
           + + E++ +F D  +I  +N +Y G D  T++++F       D C   ++ GD+ ++ + 
Sbjct: 32  KRVGEIAYIFVDDEKILEVNRQYLGHDYYTDIITF-------DYCEGDVISGDLFISLDT 84

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   A  +G  +E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 85  VRTNAEQVGATYEEELHRVIIHGILHLCGINDKGPGEREIMEAAEDKAL 133


>gi|311745076|ref|ZP_07718861.1| putative metalloprotease [Algoriphagus sp. PR1]
 gi|126577589|gb|EAZ81809.1| putative metalloprotease [Algoriphagus sp. PR1]
          Length = 141

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 5/103 (4%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           NI EL+ +F     +  +N EY   D  T++++F  +          + GDI ++ + ++
Sbjct: 34  NISELNYIFCSDEYLYNINVEYLDHDTYTDIITFDNS-----EEEQTIEGDIFISIDRVQ 88

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
             +N LG   ++ L  +I HG  HL+GY   D  +A  M   E
Sbjct: 89  ENSNKLGATLQDELSRVISHGLFHLMGYKDKDKNEAEEMRNKE 131


>gi|163840663|ref|YP_001625068.1| putative metalloprotease [Renibacterium salmoninarum ATCC 33209]
 gi|189039400|sp|A9WQS5|RRMF_RENSM RecName: Full=Probable rRNA maturation factor
 gi|162954139|gb|ABY23654.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 157

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 10/140 (7%)

Query: 41  SNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFA 91
           + L+    FV E +      ELS++  D   +E L+ E+      T+VLSFP        
Sbjct: 16  AELVRLSRFVFEKLYLHPQTELSIILADREAMEKLHVEWMYEPGATDVLSFPMDELRPGT 75

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
            S    + +LGDIV+  ++ + +A   G   E+ L+ L  HG LHLLGYDH D ++   M
Sbjct: 76  VSRPAPAGLLGDIVICPQVAQEQAQAGGHSVEDELLLLTTHGLLHLLGYDHEDPEEKAEM 135

Query: 152 EGLERSILED-LGINDPYEV 170
            GL+R +L   LG + P E 
Sbjct: 136 FGLQRELLTSFLGRDAPAET 155


>gi|282858743|ref|ZP_06267896.1| metalloprotein, YbeY/ UPF0054 family [Prevotella bivia JCVIHMP010]
 gi|282588492|gb|EFB93644.1| metalloprotein, YbeY/ UPF0054 family [Prevotella bivia JCVIHMP010]
          Length = 144

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++  +F D  +I  +N EY G D  T++++F   +   D  S    GD+V++ + +   A
Sbjct: 36  DIGYMFVDDEKILEVNNEYLGHDYYTDIITFD--YDEDDTIS----GDLVISLDTVRTNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +  K +E+ L  +IIHG LHL G   ++DK        ER I+ED
Sbjct: 90  ELFHKTYEDELERVIIHGILHLCG---INDKGPG-----EREIMED 127


>gi|300870905|ref|YP_003785776.1| hypothetical protein BP951000_1287 [Brachyspira pilosicoli 95/1000]
 gi|300688604|gb|ADK31275.1| unnamed protein product [Brachyspira pilosicoli 95/1000]
          Length = 153

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 22/119 (18%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++LVF++   I  LN ++R  DK T+VL+FP   A+         GDIV++YE      
Sbjct: 35  EVNLVFSNDDYIRGLNKQFRNKDKATDVLTFPMGEANEG-------GDIVISYEW----- 82

Query: 116 NVLGKEFENHL----VHLIIHGFLHLLGYDHVD-----DKDACVMEGLERSILEDLGIN 165
            VL +  E+ +    + LI+H  LHL G  H        K+   M  L + ILE +  N
Sbjct: 83  -VLDRYSEDKIKMTVIKLIVHSILHLQGIHHNYTEKSLKKNYKRMRELYKKILEHIKGN 140


>gi|225620349|ref|YP_002721606.1| putative metal-dependent hydrolase [Brachyspira hyodysenteriae WA1]
 gi|511147|emb|CAA51656.1| unnamed protein product [Brachyspira hyodysenteriae]
 gi|225215168|gb|ACN83902.1| putative metal-dependent hydrolase [Brachyspira hyodysenteriae WA1]
          Length = 141

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 9/87 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++L+F D   I+ LN ++R  DK T+VL+FP    +         GDIV++YE +    
Sbjct: 34  EVNLLFCDDEYIKNLNRQFRNKDKATDVLTFPMGDINEG-------GDIVISYEWVVTRY 86

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +   ++ +  ++ LIIH  LHL G  H
Sbjct: 87  S--DEKIKKTVLKLIIHSILHLKGIHH 111


>gi|311695359|gb|ADP98232.1| metalloprotease YbeY [marine bacterium HP15]
          Length = 115

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           E+  E+++    +   + LN +YRG D PTNVLSFP  F +  G +  + GD+V+   ++
Sbjct: 29  EDPSEVTVRIVGTEESQALNHQYRGRDYPTNVLSFP--FEAPAGITVPLAGDLVICAPVV 86

Query: 112 EIEA 115
           E EA
Sbjct: 87  EKEA 90


>gi|119511142|ref|ZP_01630260.1| hypothetical protein N9414_17021 [Nodularia spumigena CCY9414]
 gi|119513512|ref|ZP_01632533.1| hypothetical protein N9414_11289 [Nodularia spumigena CCY9414]
 gi|119461828|gb|EAW42844.1| hypothetical protein N9414_11289 [Nodularia spumigena CCY9414]
 gi|119464237|gb|EAW45156.1| hypothetical protein N9414_17021 [Nodularia spumigena CCY9414]
          Length = 175

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-----CSSLMLGDIVLAYEI 110
           E+ L  TD   I++LN +YR  DKPT+VLSF               + L LGDIV++   
Sbjct: 56  EIGLRLTDDAEIQSLNAQYRHQDKPTDVLSFAALEVDFPQIPEMLVAPLYLGDIVISVNT 115

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            E +A   G      L  L  HG LHLLG+DH D++    M   +  +L+ + I+
Sbjct: 116 AERQAQQQGHSLPTELAWLAAHGLLHLLGWDHPDEEQLMQMLKQQVELLKKISID 170


>gi|113955023|ref|YP_731849.1| hypothetical protein sync_2661 [Synechococcus sp. CC9311]
 gi|122945509|sp|Q0I6S3|RRMF_SYNS3 RecName: Full=Probable rRNA maturation factor
 gi|113882374|gb|ABI47332.1| Hypothetical UPF0054 protein [Synechococcus sp. CC9311]
          Length = 177

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 2/99 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--GCSSLMLGDIVLAYEIIE 112
           + L +   D   I  LN  +R    PT+VLSF    +         L LGDIV++     
Sbjct: 63  LSLGISLLDDASIAELNLHWRQKPTPTDVLSFAALESEMPMVAGQELELGDIVVSVPTAR 122

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
            +A       E  L  L+ HG LHLL +DH D+     M
Sbjct: 123 RQALEQKHGLERELRWLVSHGLLHLLSWDHPDEDALAAM 161


>gi|284030364|ref|YP_003380295.1| hypothetical protein Kfla_2422 [Kribbella flavida DSM 17836]
 gi|283809657|gb|ADB31496.1| protein of unknown function UPF0054 [Kribbella flavida DSM 17836]
          Length = 158

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLM--LGDIVLAYE 109
           ELS+   D   +   + E+  +  PT+V+S+P       + +D     +  LGDI L   
Sbjct: 36  ELSIKLVDEDTMARYHVEFLDLPGPTDVMSWPMDELRPGSDNDDAEPPLGHLGDIALCPT 95

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           +   +    G      L  L +HG LHLLGYDH +  +   M  ++  +LE
Sbjct: 96  VAAAQGAKAGHGTWAELELLTVHGILHLLGYDHAEPAEKAEMWDVQGRLLE 146


>gi|332664486|ref|YP_004447274.1| metalloprotease ybeY [Haliscomenobacter hydrossis DSM 1100]
 gi|332333300|gb|AEE50401.1| metalloprotease ybeY [Haliscomenobacter hydrossis DSM 1100]
          Length = 159

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + + +EI+       +  + +  ++S+    K  ++ ++ VF D   +  LN EY   D 
Sbjct: 21  SFFAEEIYFEPANPELLRRWIEEIVSRE---KRELIFINYVFCDDPYLLKLNQEYLQHDT 77

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++FP           ++ GD+ ++ + I   A+  G  FE  L  ++IHG LHL G
Sbjct: 78  LTDIITFPY------HDPPIVEGDVFISVDRIHDNAHQFGVTFEQELHRVMIHGVLHLCG 131

Query: 140 Y 140
           Y
Sbjct: 132 Y 132


>gi|123967737|ref|YP_001008595.1| metal-dependent hydrolase [Prochlorococcus marinus str. AS9601]
 gi|145572764|sp|A2BNX7|RRMF_PROMS RecName: Full=Probable rRNA maturation factor
 gi|123197847|gb|ABM69488.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           AS9601]
          Length = 179

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 1/117 (0%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-DGCSSLMLGDIV 105
            Y   +    L L    +  I +LN ++   + PT+VLSFP     S +    + LGDI 
Sbjct: 62  NYIFDKKSFSLGLQIISNQEIASLNKKWMQKNGPTDVLSFPIISDESLNNLDHIELGDIF 121

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           ++ E+   ++          ++ L  HGFLHLLG++H ++ D   M   +  ++  L
Sbjct: 122 ISLEMALEQSYEYKHSIYREMIWLASHGFLHLLGWEHNNEHDLENMLNFQEYLITRL 178


>gi|262280176|ref|ZP_06057960.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257954|gb|EEY76688.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 160

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEI 113
           E+ +   D    + LN +YR  DKPTNVLSFP+           +  LGD+V+   ++  
Sbjct: 41  EIGVACVDLAESQQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDAFPLGDLVICIPVVLQ 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           EA    K  + H  HL++HG LHLLGYDH   D++A  MEGLE  IL  L I++PY+
Sbjct: 101 EAVEQKKTAQEHFAHLLVHGVLHLLGYDHETSDEEAEEMEGLEVEILAKLNIDNPYQ 157


>gi|157818335|ref|NP_001101999.1| hypothetical protein LOC361822 [Rattus norvegicus]
 gi|149043696|gb|EDL97147.1| similar to RIKEN cDNA A130042E20; open reading frame 57 (predicted)
           [Rattus norvegicus]
          Length = 164

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP         F          LGD+ L  
Sbjct: 36  DLGIICVDNKNIQNINRIYRNKNVPTDVLSFPFHENLKAGEFPQPRSPDDYNLGDVFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E I  +     +++ + L     HG  HLLG+ H  + +   M   E+ +LE+L
Sbjct: 96  EYI-FQYCKGNEDYYDVLTVTATHGLCHLLGFTHSSEAEWQKMYNQEKLVLEEL 148


>gi|146298765|ref|YP_001193356.1| hypothetical protein Fjoh_1004 [Flavobacterium johnsoniae UW101]
 gi|189038538|sp|A5FL87|RRMF_FLAJ1 RecName: Full=Probable rRNA maturation factor
 gi|146153183|gb|ABQ04037.1| protein of unknown function UPF0054 [Flavobacterium johnsoniae
           UW101]
          Length = 139

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 6/105 (5%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           ++N  E++ +F D   +  +N EY   D  T+++SF     +       + GDI ++ E 
Sbjct: 30  EKNEGEINYIFCDDEYLHKINVEYLNHDTLTDIISFDYTVGNE------ISGDIFVSVER 83

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           +E  A      FE  L  ++ HG LH  GY    D DA +M   E
Sbjct: 84  VEDNAKDFNVSFEEELKRVLAHGILHYCGYKDKSDADAELMRSKE 128


>gi|229815232|ref|ZP_04445568.1| hypothetical protein COLINT_02278 [Collinsella intestinalis DSM
           13280]
 gi|229809242|gb|EEP45008.1| hypothetical protein COLINT_02278 [Collinsella intestinalis DSM
           13280]
          Length = 172

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 9/142 (6%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           V A A   L ++G    E  VE+SL + D   +  LN ++R ID+ T+VLSF    A  +
Sbjct: 23  VCAIAAHVLAAEGV---ERDVEISLSYVDEDEMHDLNRQWRDIDRTTDVLSFECDSAFDE 79

Query: 95  GCS---SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                  L LGDI+LA E+I  +A   G +  +    +++HG LHLLGYDH++D +A  M
Sbjct: 80  DIPLDEVLELGDIILAPEVIARQAPGFGNDPTDECRLMLVHGLLHLLGYDHIEDDEAEEM 139

Query: 152 EGLERSILEDLGI---NDPYEV 170
           E  E ++L +L +   +DP +V
Sbjct: 140 EAREDALLRELAVQRGDDPSKV 161


>gi|257063748|ref|YP_003143420.1| conserved hypothetical protein TIGR00043 [Slackia
           heliotrinireducens DSM 20476]
 gi|256791401|gb|ACV22071.1| conserved hypothetical protein TIGR00043 [Slackia
           heliotrinireducens DSM 20476]
          Length = 163

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 18/112 (16%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D +H   L   V  + ++  +       EN  E+S+ F D   I+ LN EYRGIDKPT+V
Sbjct: 6   DVLHGEDLVSQVDVERLAEYVLTQEGCPEN-TEVSITFVDDEEIQRLNLEYRGIDKPTDV 64

Query: 84  LSFPT-----AFASSDGC--------SSLMLGDIVLAYEIIEIEANVLGKEF 122
           LSF        F   D             +LGDI++A ++    AN    +F
Sbjct: 65  LSFECDGYDDEFDDGDAYEDAGVPDDEPFLLGDIIIATDV----ANAQTAQF 112


>gi|295131912|ref|YP_003582588.1| metalloprotease [Zunongwangia profunda SM-A87]
 gi|294979927|gb|ADF50392.1| metalloprotease [Zunongwangia profunda SM-A87]
          Length = 146

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           V+ K +  +IS      + + E+S +F D   +  +N  +   D  T+++SF       D
Sbjct: 23  VYKKWIERVISSE---GKRLGEISYIFCDDDYLLDINQRFLNHDTYTDIISFD------D 73

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
              +L+ GDI ++ E +   A    ++FE  L  +++HG LH  GY    D++A +M   
Sbjct: 74  SIGNLLNGDIYISTERVRENALEFNEDFETELKRVLVHGILHYCGYKDKSDEEAMLMREK 133

Query: 155 E 155
           E
Sbjct: 134 E 134


>gi|84688108|ref|ZP_01015961.1| hypothetical protein 1099457000212_RB2654_05425 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84663878|gb|EAQ10389.1| hypothetical protein RB2654_05425 [Rhodobacterales bacterium
           HTCC2654]
          Length = 127

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 14/104 (13%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L  L E   A  ++ L   G        E++L+  D  RI  LN E+R    PTNVLS
Sbjct: 15  LGLEALAETACAATLAKLGIAG-------AEIALLACDDDRIAALNTEFRDKPTPTNVLS 67

Query: 86  FPTAFASSDGCSS-------LMLGDIVLAYEIIEIEANVLGKEF 122
           +P+    +D           + LGDI +AY+    EA   GK  
Sbjct: 68  WPSEERGADQPGGDPYPPEDMELGDIAIAYDTCAGEAAEAGKPM 111


>gi|225715688|gb|ACO13690.1| metalloprotease C21orf57 [Esox lucius]
          Length = 168

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CS----SLMLGDIVLAY 108
           +L ++  D+ +I+ +N  YR  + PT+VLSFP       G   C        LGDI L  
Sbjct: 36  DLGVICVDNRKIQRINNIYRKNNSPTDVLSFPFYEELRPGKLPCPLHRDEQNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E +  +     ++    L  +  HG  HLLGY H  +++   M   E  IL + 
Sbjct: 96  EYLMKQCQQESQDLHETLTSVTAHGICHLLGYRHETEEEWKEMLQKESYILNEF 149


>gi|115380060|ref|ZP_01467104.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|310822820|ref|YP_003955178.1| hypothetical protein STAUR_5586 [Stigmatella aurantiaca DW4/3-1]
 gi|115362935|gb|EAU62126.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|309395892|gb|ADO73351.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 282

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 55/109 (50%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELSL       I  LN  +R  DK T+VLSFP             LGD+V++ +  + +A
Sbjct: 160 ELSLSLVGDRAIRRLNRTWRKKDKATDVLSFPAGELPKGTPGPRQLGDVVISIDTAKRQA 219

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              G+  E+ +   + HG LHLLG+DH    DA  M  LE  +L + G+
Sbjct: 220 KEYGRTMESEMARYLAHGLLHLLGHDHERTYDARKMATLEEKLLGERGM 268


>gi|95929411|ref|ZP_01312154.1| protein of unknown function UPF0054 [Desulfuromonas acetoxidans DSM
           684]
 gi|95134527|gb|EAT16183.1| protein of unknown function UPF0054 [Desulfuromonas acetoxidans DSM
           684]
          Length = 157

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 2/107 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS+V  D  +I+ +N +Y   D PTNV+SF        G    +LGD+V++ +    +
Sbjct: 35  TELSVVIVDDDQIQEINRDYLQRDNPTNVISFAQQEGEGAGICPELLGDVVISADTAARD 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSIL 159
           A   G  F + +  L+IHG LHLLGYDH    ++ A  ME  ER + 
Sbjct: 95  AAEAGVPFFSEMSFLLIHGILHLLGYDHERGTEEQATEMEAKERELF 141


>gi|290985008|ref|XP_002675218.1| predicted protein [Naegleria gruberi]
 gi|284088813|gb|EFC42474.1| predicted protein [Naegleria gruberi]
          Length = 231

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---------------- 100
           ++++F  +  I +LN + R    PT++LS+P      D   +LM                
Sbjct: 82  VTVLFCGNKYITSLNEKDRKKKGPTDILSYPVYSPDLDHNFALMEKDAAFNDDLAKLLAD 141

Query: 101 -----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                      LGD+V++   I           ++H+  L+ HG LHL+GYDH  D D  
Sbjct: 142 EHKILMEEEKFLGDMVISQPYIVDYCKENNISLDHHMALLLTHGILHLMGYDHETDSDYA 201

Query: 150 VMEGLERSILEDL 162
           +M+  E  IL  L
Sbjct: 202 IMKEKEDEILSGL 214


>gi|302344831|ref|YP_003813184.1| translation metalloprotein YbeY [Prevotella melaninogenica ATCC
           25845]
 gi|302149577|gb|ADK95839.1| translation metalloprotein YbeY [Prevotella melaninogenica ATCC
           25845]
          Length = 142

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+  +F D  +I  +N EY G D  T++++F   +   D    ++ GD+V++ + +   A
Sbjct: 36  EIGYMFVDDEKILEVNNEYLGHDYYTDIITFD--YDEDD----VLNGDLVISLDTVRSNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +  K +E+ L  +IIHG LHL G   ++DK        ER I+E+
Sbjct: 90  ELFKKSYEDELNRVIIHGILHLCG---INDKGPG-----EREIMEE 127


>gi|228470093|ref|ZP_04055002.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228308231|gb|EEK17086.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 150

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           +   + E++  +TD   I   N  +   D  T+V++FP    S       + GDI+++ +
Sbjct: 8   MNRTVGEINFQYTDDEGILKANRAFLQHDYYTDVITFPRE--SEQEGDDAIYGDILISID 65

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
            +   A  LG  F+  L  ++IHG LHLLG D
Sbjct: 66  TVATNAQELGVPFKQELYRVMIHGILHLLGID 97


>gi|261878861|ref|ZP_06005288.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270334540|gb|EFA45326.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 143

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 6/103 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +  +F D  +I  +N +Y G D  T++++F       DG   ++ GD+V++ + +   A 
Sbjct: 37  IGYMFVDDKKILEVNNQYLGHDYYTDIITFDY----DDG--DVINGDLVISLDTVRSNAE 90

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + GK++ + L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 91  LFGKDYADELNRVIIHGILHLCGINDKGPGEREIMEAHEEKAL 133


>gi|288801762|ref|ZP_06407204.1| metalloprotease [Prevotella melaninogenica D18]
 gi|288335804|gb|EFC74237.1| metalloprotease [Prevotella melaninogenica D18]
          Length = 143

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+  +F D  +I  +N EY G D  T++++F   +   D    ++ GD+V++ + +   A
Sbjct: 36  EIGYMFVDDEKILEVNNEYLGHDYYTDIITFD--YDEDD----VLNGDLVISLDTVRSNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +  K +E+ L  +IIHG LHL G   ++DK        ER I+E+
Sbjct: 90  ELFKKSYEDELHRVIIHGILHLCG---INDKGPG-----EREIMEE 127


>gi|220904823|ref|YP_002480135.1| hypothetical protein Ddes_1556 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869122|gb|ACL49457.1| protein of unknown function UPF0054 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 156

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           + G       VEL L+  D   +   N  + G   PTN+LSFP    S         G +
Sbjct: 41  APGEAQAPEGVELYLL--DDASVARANAGHLGCTGPTNILSFPGGSGSP--------GAL 90

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +L+ + +  E  + G++   H V L+ HG  HL G DH    DA
Sbjct: 91  LLSLDTLRRECLLYGQDPAEHAVRLLAHGMGHLRGLDHGPVMDA 134


>gi|224536891|ref|ZP_03677430.1| hypothetical protein BACCELL_01767 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521479|gb|EEF90584.1| hypothetical protein BACCELL_01767 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 136

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYE 109
           K+ + E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ +
Sbjct: 31  KKRVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGNRLSGDLFISLD 83

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +   A   G ++E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 84  TVRTNAEQFGSDYETELHRVIIHGILHLCGINDKGPGEREIMEAAENKAL 133


>gi|260061291|ref|YP_003194371.1| hypothetical protein RB2501_06820 [Robiginitalea biformata
           HTCC2501]
 gi|88785423|gb|EAR16592.1| hypothetical protein RB2501_06820 [Robiginitalea biformata
           HTCC2501]
          Length = 140

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL  VF     +  +N +Y G D  T++L+F       DG S    GDI ++ + I   A
Sbjct: 36  ELQFVFCSDDYLLEMNHKYLGHDYYTDILTFENDL--EDGVS----GDIFISIDRIRDNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
                 FE  L  ++IHG LHL+G+    +K+  +M   E + L
Sbjct: 90  KTYCVPFEEELARVMIHGVLHLIGFGDSTEKEKEIMRQEESACL 133


>gi|209527916|ref|ZP_03276403.1| protein of unknown function UPF0054 [Arthrospira maxima CS-328]
 gi|209491636|gb|EDZ92004.1| protein of unknown function UPF0054 [Arthrospira maxima CS-328]
          Length = 152

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 31/149 (20%)

Query: 10  RLDLQIAVENALW----GDEIHLRTLCEVVFAKAVSNLISKGYFVK-----------ENI 54
           ++ L++ +E+  W    G+ + L  L E    KA++    + +F +              
Sbjct: 7   KVQLEVNIEDNFWWGKEGESLRLGELAE----KAIAPETWESWFCQWLQQLDPYLPPAKG 62

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF---------PTAFASSDGCSSLMLGDIV 105
            ELSL  TD   I+  N +YR +D+ T+VLSF         P    S   C    LGDI+
Sbjct: 63  YELSLRLTDDREIQEFNAQYRQLDEATDVLSFAALETSLVMPAEHLSLHPC---YLGDII 119

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           ++ E    +A   G      L  L  HG 
Sbjct: 120 ISVETAFRQAQQAGHNLTTELAWLTSHGL 148


>gi|307564806|ref|ZP_07627334.1| metalloprotein, YbeY family [Prevotella amnii CRIS 21A-A]
 gi|307346528|gb|EFN91837.1| metalloprotein, YbeY family [Prevotella amnii CRIS 21A-A]
          Length = 144

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++  +F +  +I  +N EY   D  T++++F    A++      + GD+V++ + +   A
Sbjct: 36  DIGYMFVNDEKILQINNEYLKHDYYTDIITFDYDEANT------ISGDLVISIDTVRTNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +  K ++N L  +IIHG LHL G   ++DK        ER I+ED
Sbjct: 90  ELFKKTYQNELERVIIHGILHLCG---INDKGPG-----EREIMED 127


>gi|237716840|ref|ZP_04547321.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405610|ref|ZP_06082160.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|229442823|gb|EEO48614.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356485|gb|EEZ05575.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|295086058|emb|CBK67581.1| conserved hypothetical protein TIGR00043 [Bacteroides xylanisolvens
           XB1A]
          Length = 139

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIHTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +E+ L  +IIHG LHL G +     +  +MEG E   L
Sbjct: 90  AEQFGTSYEDELHRVIIHGILHLCGINDKGPGEREIMEGAENKAL 134


>gi|194226355|ref|XP_001916890.1| PREDICTED: similar to Putative metalloprotease C21orf57 [Equus
           caballus]
          Length = 164

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 8/115 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP             D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRIYREKNIPTDVLSFPFHENLKAGEIPQPDFPDDYNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I  +     +++ + L     HG  HLLG+ H  + +   M   E+ +LE+L 
Sbjct: 96  EYI-FQQCKENEDYYDILTVTATHGLCHLLGFTHSTEAEWQKMYQKEKQVLEELS 149


>gi|294644443|ref|ZP_06722206.1| metalloprotein, YbeY family [Bacteroides ovatus SD CC 2a]
 gi|294810438|ref|ZP_06769095.1| metalloprotein, YbeY family [Bacteroides xylanisolvens SD CC 1b]
 gi|292640278|gb|EFF58533.1| metalloprotein, YbeY family [Bacteroides ovatus SD CC 2a]
 gi|294442403|gb|EFG11213.1| metalloprotein, YbeY family [Bacteroides xylanisolvens SD CC 1b]
          Length = 128

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 26  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIHTN 78

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +E+ L  +IIHG LHL G +     +  +MEG E   L
Sbjct: 79  AEQFGTSYEDELHRVIIHGILHLCGINDKGPGEREIMEGAENKAL 123


>gi|116878499|ref|YP_356652.2| hypothetical protein Pcar_1233 [Pelobacter carbinolicus DSM 2380]
 gi|123770478|sp|Q3A575|RRMF_PELCD RecName: Full=Probable rRNA maturation factor
 gi|114843135|gb|ABA88482.2| conserved hypothetical protein TIGR00043 [Pelobacter carbinolicus
           DSM 2380]
          Length = 150

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 2/103 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELSL+  D   I+ +N +Y   DKPTNV+SF        G    +LGD++++ +    +
Sbjct: 36  AELSLLIVDDIEIQQINRDYLQRDKPTNVISFAMQEGEDVGLHPGLLGDVIISADTAARD 95

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLE 155
           A      FE+ L  L++HG LHLLGYDH    ++DA  ME  E
Sbjct: 96  AREADLPFESELYFLLLHGVLHLLGYDHERGTEEDARRMEARE 138


>gi|218961523|ref|YP_001741298.1| hypothetical protein CLOAM1232 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730180|emb|CAO81092.1| conserved hypothetical protein [Candidatus Cloacamonas
           acidaminovorans]
          Length = 154

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 13/120 (10%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---------FASSDGCSS--LM 100
           E+  ++ +   DS  ++  N  YRG+++ T++LSF TA             DG S+  + 
Sbjct: 31  EHSYQICVKTVDSETMKHYNKRYRGLNETTDILSFITADLPACAIEERDEEDGFSAKPVR 90

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           + DI++  + +  +  +  +  E     ++IHG LHL+GYDH+   DA  M   E   L+
Sbjct: 91  ICDIIIDIKRLFQQKGI--RTLEEEYRAVLIHGLLHLVGYDHIRSADAEKMNKKEEYYLK 148


>gi|323343742|ref|ZP_08083969.1| metal dependent hydrolase [Prevotella oralis ATCC 33269]
 gi|323095561|gb|EFZ38135.1| metal dependent hydrolase [Prevotella oralis ATCC 33269]
          Length = 143

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 6/104 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+  +F D  +I  +N +Y G D  T++++F      +DG +  + GD+V++ + +   A
Sbjct: 36  EIGYMFVDDAKILEVNNQYLGHDYYTDIITFDY----NDGDT--INGDLVISLDTVHSNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
               K++E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 90  EKFNKKYEEELHRVIIHGILHLCGINDKGPGEREIMEANENKAL 133


>gi|298530259|ref|ZP_07017661.1| protein of unknown function UPF0054 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509633|gb|EFI33537.1| protein of unknown function UPF0054 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 143

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L+LV TD  R++ LN  +     PTNVL+F        G     LG++ ++ + +  E+ 
Sbjct: 40  LNLVITDDSRMQHLNSAFLFCPGPTNVLAFEEESRHESG----FLGEVFISAQAVIRESI 95

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDH 142
           +  +    H V L+ HG  HL G++H
Sbjct: 96  LYSQPIFEHFVRLLAHGIEHLAGFEH 121


>gi|3643597|gb|AAC42244.1| hypothetical protein [Arabidopsis thaliana]
          Length = 343

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 13/100 (13%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VELS++  +   I  LN E+RG D  T+VLS  +          LM+GD+V++ E    +
Sbjct: 143 VELSVMLCNDDFICKLNKEWRGEDHATDVLSM-SQHVPELKLPVLMMGDLVISVETAARQ 201

Query: 115 ANVLGKEFENHLVHLI------------IHGFLHLLGYDH 142
           A   G    + +  L+            IHG LHLLG+DH
Sbjct: 202 AAERGHTLLDEIRILVSLFADTLNVFSKIHGLLHLLGFDH 241


>gi|301767368|ref|XP_002919099.1| PREDICTED: putative metalloprotease C21orf57-like [Ailuropoda
           melanoleuca]
          Length = 164

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 10/115 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP             D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRMYREKNIPTDVLSFPFHENIKAGELPQPDFQDDYNLGDIFLGV 95

Query: 109 EIIEIEANVLGKE-FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E I  +    G E + + L     HG  HLLG+ H  + +   M   E+ +LE+L
Sbjct: 96  EYIFQQCR--GHEDYYDILTVTATHGLCHLLGFTHSTEAEWQKMYQKEKQVLEEL 148


>gi|193216879|ref|YP_002000121.1| hypothetical protein MARTH_orf636 [Mycoplasma arthritidis 158L3-1]
 gi|193002202|gb|ACF07417.1| conserved hypothetical protein [Mycoplasma arthritidis 158L3-1]
          Length = 106

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 66  RIETLNFEYRGIDKPTNVLSFP-TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +++ LN  +R  +  T++LSFP       +    L LG I+++   I+ +A       + 
Sbjct: 4   KMKKLNRHFRNKNYVTDILSFPLEGLEELNFLEVLPLGQIIMSPWKIKKQAKEFNHSLKR 63

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              ++  HG  HL G+DH  + +A +M     +I+  L I
Sbjct: 64  EFCYIFAHGIAHLFGFDHQTEDEAKIMNAHVDNIMNKLNI 103


>gi|83816771|ref|YP_446198.1| hypothetical protein SRU_2092 [Salinibacter ruber DSM 13855]
 gi|294508126|ref|YP_003572184.1| Conserved hypothetical protein containing UPF0054 [Salinibacter
           ruber M8]
 gi|123528328|sp|Q2S0T3|RRMF_SALRD RecName: Full=Probable rRNA maturation factor
 gi|83758165|gb|ABC46278.1| conserved hypothetical protein TIGR00043 [Salinibacter ruber DSM
           13855]
 gi|294344454|emb|CBH25232.1| Conserved hypothetical protein containing UPF0054 [Salinibacter
           ruber M8]
          Length = 157

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIV 105
           ++  LSLV TD   +  LN  Y   D  T+VLSF       P++ AS +G    +  D+ 
Sbjct: 39  SLTHLSLVLTDHDTVRRLNQSYLDHDYDTDVLSFSLREGPAPSSGASGEGIEGEVYVDLD 98

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
            A E      +     FE      ++HG LHL+GYD
Sbjct: 99  TAAE----RHDEFDTSFEREAYRYVVHGLLHLVGYD 130


>gi|315224153|ref|ZP_07865993.1| possible metal dependent hydrolase [Capnocytophaga ochracea F0287]
 gi|314945886|gb|EFS97895.1| possible metal dependent hydrolase [Capnocytophaga ochracea F0287]
          Length = 139

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++ +F D   +  +N EY   D  T++++F      S+G   ++  DI ++ E ++  AN
Sbjct: 37  INYIFCDDEYLHKINVEYLQHDTLTDIITF----DYSEG--KVLHSDIYISVERVKENAN 90

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           +    F+  L+ ++ HG LHL GY     +D+ +M   E
Sbjct: 91  IFKVPFQKELLRVLAHGLLHLCGYKDKTPEDSALMRNKE 129


>gi|34540326|ref|NP_904805.1| hypothetical protein PG0510 [Porphyromonas gingivalis W83]
 gi|62901349|sp|Q7MWS9|RRMF_PORGI RecName: Full=Probable rRNA maturation factor
 gi|34396638|gb|AAQ65704.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 151

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 29/154 (18%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           V+LPR+  +I      W  E+  R      + KAV               E+S +F D  
Sbjct: 11  VSLPRIRRRIV---GKWIAEVCSR------YGKAVG--------------EISYLFCDDE 47

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            I   N E+   D  T++++F +  A +      + GD++++ + +   A  L   +E+ 
Sbjct: 48  YILKANQEFLDHDYYTDIITFDSCEADT------VNGDLLISLDTVRSNARALDLRYEDE 101

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           L  +IIHG LHL G      KD   M   E   L
Sbjct: 102 LHRVIIHGILHLCGLKDKSKKDEAQMRAAEEKAL 135


>gi|256820953|ref|YP_003142232.1| hypothetical protein Coch_2127 [Capnocytophaga ochracea DSM 7271]
 gi|256582536|gb|ACU93671.1| protein of unknown function UPF0054 [Capnocytophaga ochracea DSM
           7271]
          Length = 139

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++ +F D   +  +N EY   D  T++++F      S+G   ++  DI ++ E ++  AN
Sbjct: 37  INYIFCDDEYLHKINVEYLQHDTLTDIITF----DYSEG--KVLHSDIYISVERVKENAN 90

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           +    F+  L+ ++ HG LHL GY     +D+ +M   E
Sbjct: 91  IFKVPFQRELLRVLAHGLLHLCGYKDKTPEDSALMRNKE 129


>gi|42522997|ref|NP_968377.1| metal-dependent hydrolase, putative [Bdellovibrio bacteriovorus
           HD100]
 gi|59799115|sp|Q6MMY3|RRMF_BDEBA RecName: Full=Probable rRNA maturation factor
 gi|39575202|emb|CAE79370.1| metal-dependent hydrolase, putative [Bdellovibrio bacteriovorus
           HD100]
          Length = 150

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL+LVF D    + +N E+RG +  T+VLSF       D      LG++VL  E+++ ++
Sbjct: 43  ELTLVFLDKKPAQKINMEFRGKNYATDVLSF-------DSMDPGSLGELVLCPEVLKRQS 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
              G  ++  L ++++HG LHLLGYDH         E  E   LE  GI D
Sbjct: 96  KEHGLTYQQELGYMLLHGVLHLLGYDH---------ETSEAEALEMFGIQD 137


>gi|188995326|ref|YP_001929578.1| hypothetical protein PGN_1462 [Porphyromonas gingivalis ATCC 33277]
 gi|238691487|sp|B2RKT6|RRMF_PORG3 RecName: Full=Probable rRNA maturation factor
 gi|188595006|dbj|BAG33981.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 151

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 29/154 (18%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           V+LPR+  +I      W  E+  R      + KAV               E+S +F D  
Sbjct: 11  VSLPRIRRRIV---GKWIAEVCSR------YGKAVG--------------EISYLFCDDE 47

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            I   N E+   D  T++++F +  A +      + GD++++ + +   A  L   +E+ 
Sbjct: 48  YILKANQEFLDHDYYTDIITFDSCEADT------VNGDLLISLDTVRSNARALDLRYEDE 101

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           L  +IIHG LHL G      KD   M   E   L
Sbjct: 102 LHRVIIHGILHLCGLKDKSKKDEAQMRAAEEEAL 135


>gi|283780308|ref|YP_003371063.1| hypothetical protein Psta_2534 [Pirellula staleyi DSM 6068]
 gi|283438761|gb|ADB17203.1| protein of unknown function UPF0054 [Pirellula staleyi DSM 6068]
          Length = 143

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+S+   D   +  LN +Y   D  T+ LSF   F         + G+++++ +    E
Sbjct: 36  AEISVAVVDGDEMHQLNRQYLQHDYTTDCLSFVLDFEDDH-----LEGEVIVSADYAAQE 90

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +   G   E+ L+  +IH  LHL+G+D  ++ D   M   E+ IL   G+
Sbjct: 91  SLQYGWRMEDELLLYVIHASLHLIGHDDHEESDIAKMREAEKQILAQFGL 140


>gi|298207257|ref|YP_003715436.1| hypothetical protein CA2559_03360 [Croceibacter atlanticus
           HTCC2559]
 gi|83849893|gb|EAP87761.1| hypothetical protein CA2559_03360 [Croceibacter atlanticus
           HTCC2559]
          Length = 138

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           +N+ E++ +F D   + ++N +Y   D  T+++SF T+  +       + GDI ++ E I
Sbjct: 30  KNLGEINYIFCDDAYLLSINQQYLDHDTYTDIISFDTSEGND------LSGDIFISVERI 83

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           +  A       ++ L  +++HG LH  GY    D +A +M   E   L+
Sbjct: 84  QENAQQFNVSVDDELKRVLVHGILHFCGYKDKTDDEAKLMREKEDEKLK 132


>gi|34785713|gb|AAH57308.1| RIKEN cDNA A130042E20 gene [Mus musculus]
          Length = 164

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSF          F          LGDI L  
Sbjct: 36  DLGIICVDNKTIQNINRIYRNKNVPTDVLSFSFHENLKAGEFPQPHSPDDYNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I ++     +++ + L     HG  HLLG+ H    +   M   E+ +LEDL 
Sbjct: 96  EYI-LQHCRESEDYCDVLTVTATHGLCHLLGFTHSSKAEWQKMYNQEKLVLEDLS 149


>gi|325859868|ref|ZP_08172998.1| translation metalloprotein YbeY [Prevotella denticola CRIS 18C-A]
 gi|327312920|ref|YP_004328357.1| translation metalloprotein YbeY [Prevotella denticola F0289]
 gi|325482794|gb|EGC85797.1| translation metalloprotein YbeY [Prevotella denticola CRIS 18C-A]
 gi|326946199|gb|AEA22084.1| translation metalloprotein YbeY [Prevotella denticola F0289]
          Length = 139

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           + E+  +F    +I  +N EY G D  T++++F     +      ++ GD+V++ + +  
Sbjct: 34  VGEIGYMFVGDEKILEINNEYLGHDYYTDIITFDYDEGN------VLNGDLVISLDTVRS 87

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            A +  K +E+ L  +IIHG LHL G +     +  +ME  E   LE
Sbjct: 88  NAELFHKSYEDELNRVIIHGILHLCGINDKGPGEREIMEENENKALE 134


>gi|237720597|ref|ZP_04551078.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450348|gb|EEO56139.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 139

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIRTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +E+ L  +IIHG LHL G +     +  VME  E   L
Sbjct: 90  AEQFGASYEDELHRVIIHGILHLCGINDKGPGEREVMEAAENQAL 134


>gi|296126703|ref|YP_003633955.1| hypothetical protein Bmur_1670 [Brachyspira murdochii DSM 12563]
 gi|296018519|gb|ADG71756.1| protein of unknown function UPF0054 [Brachyspira murdochii DSM
           12563]
          Length = 145

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 10/101 (9%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++L+F D   I+ LN ++R  +K T+VL+FP      +G      GDIV++YE ++   
Sbjct: 34  DVNLLFCDDEYIKKLNNDFRNKNKATDVLTFPMG-DDDEG------GDIVISYEWVKNRY 86

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +    + +  ++ LIIH  LHL G  H   K   +ME  E+
Sbjct: 87  S--EDKIKKTVLKLIIHSILHLKGIHHNYSK-KSLMENNEK 124


>gi|293373384|ref|ZP_06619740.1| metalloprotein, YbeY family [Bacteroides ovatus SD CMC 3f]
 gi|292631670|gb|EFF50292.1| metalloprotein, YbeY family [Bacteroides ovatus SD CMC 3f]
          Length = 128

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 26  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIRTN 78

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +E+ L  +IIHG LHL G +     +  VME  E   L
Sbjct: 79  AEQFGASYEDELHRVIIHGILHLCGINDKGPGEREVMEAAENQAL 123


>gi|255690276|ref|ZP_05413951.1| putative metalloprotease [Bacteroides finegoldii DSM 17565]
 gi|260624179|gb|EEX47050.1| putative metalloprotease [Bacteroides finegoldii DSM 17565]
          Length = 139

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIRTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  ++N L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 90  AEQFGASYDNELHRVIIHGILHLCGINDKGPGEREIMEAAENKAL 134


>gi|299145303|ref|ZP_07038371.1| putative metalloprotease [Bacteroides sp. 3_1_23]
 gi|298515794|gb|EFI39675.1| putative metalloprotease [Bacteroides sp. 3_1_23]
          Length = 139

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIRTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +E+ L  +IIHG LHL G +     +  VME  E   L
Sbjct: 90  AEQFGASYEDELHRVIIHGILHLCGINDKGPGEREVMEAAENQAL 134


>gi|126662720|ref|ZP_01733719.1| hypothetical protein FBBAL38_05175 [Flavobacteria bacterium BAL38]
 gi|126626099|gb|EAZ96788.1| hypothetical protein FBBAL38_05175 [Flavobacteria bacterium BAL38]
          Length = 139

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++ +F +   +  +N EY   D  T+++SF           +L+ GDI ++ E ++  A
Sbjct: 35  EINYIFCNDEYLHKINVEYLDHDTLTDIISFDYT------VGNLVQGDIFISIERVQDNA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           N     F+  L  ++ HG LH  GY     KD  +M   E   ++
Sbjct: 89  NDFNVSFDEELKRVLSHGVLHYCGYKDKTPKDEALMRSKEEEKMQ 133


>gi|160882931|ref|ZP_02063934.1| hypothetical protein BACOVA_00893 [Bacteroides ovatus ATCC 8483]
 gi|260172638|ref|ZP_05759050.1| hypothetical protein BacD2_12296 [Bacteroides sp. D2]
 gi|315920928|ref|ZP_07917168.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156111614|gb|EDO13359.1| hypothetical protein BACOVA_00893 [Bacteroides ovatus ATCC 8483]
 gi|313694803|gb|EFS31638.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 138

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIRTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +E+ L  +IIHG LHL G +     +  VME  E   L
Sbjct: 90  AEQFGASYEDELHRVIIHGILHLCGINDKGPGEREVMEAAENKAL 134


>gi|289704493|ref|ZP_06500929.1| metalloprotein, YbeY/ UPF0054family [Micrococcus luteus SK58]
 gi|289705007|ref|ZP_06501420.1| metalloprotein, YbeY/ UPF0054family [Micrococcus luteus SK58]
 gi|289558266|gb|EFD51544.1| metalloprotein, YbeY/ UPF0054family [Micrococcus luteus SK58]
 gi|289558785|gb|EFD52040.1| metalloprotein, YbeY/ UPF0054family [Micrococcus luteus SK58]
          Length = 157

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 4/117 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEII 111
            E ++   D+ R+  L+ E+  +  PT+V+S P       S +  +  +LGD+VL  E+ 
Sbjct: 35  AETAVTVVDAARMAELHEEWMDLPGPTDVMSLPMDELTPGSPEAPAEGVLGDVVLCPEVA 94

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE-RSILEDLGINDP 167
             +A   G   ++ L+ L+ HG LHLLGYDH++D D   M GL+ R + E LG   P
Sbjct: 95  AEQAARGGHSRDDELLLLLTHGMLHLLGYDHLEDADREEMFGLQDRLVSEVLGRPAP 151


>gi|147899075|ref|NP_001087112.1| ybeY metallopeptidase (putative) [Xenopus laevis]
 gi|50604012|gb|AAH78000.1| MGC82413 protein [Xenopus laevis]
          Length = 165

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           +L ++  ++ RI+ +N  YRG D  T+VLSF       P+            LGDI L  
Sbjct: 36  DLGIICVNNARIQHINRVYRGQDSVTDVLSFPFHEDLNPSLLPIPATPDEYNLGDIYLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
             I  +     +++ + L    +HG  HLLG+ H + +    M   E  IL ++ 
Sbjct: 96  AFIYEQCQKTQEDYRSILTITAVHGLCHLLGHKHNNPEKWKQMFEKETEILNEIN 150


>gi|198274088|ref|ZP_03206620.1| hypothetical protein BACPLE_00225 [Bacteroides plebeius DSM 17135]
 gi|198273166|gb|EDY97435.1| hypothetical protein BACPLE_00225 [Bacteroides plebeius DSM 17135]
          Length = 140

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 14/128 (10%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
             + KAV+    K       + E++ +F    +I  +N +Y   D  T++++F       
Sbjct: 20  TAWIKAVAETYGK------KVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF------- 66

Query: 94  DGCSSLML-GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           D C    L GD+ ++ + +   A      +E  L  +IIHG LHL G +     +  +ME
Sbjct: 67  DYCEGKKLSGDLFISLDTVRTNAEQFDAAYETELYRVIIHGILHLCGINDKGPGEREIME 126

Query: 153 GLERSILE 160
             E   LE
Sbjct: 127 AAENKALE 134


>gi|153807201|ref|ZP_01959869.1| hypothetical protein BACCAC_01479 [Bacteroides caccae ATCC 43185]
 gi|149130321|gb|EDM21531.1| hypothetical protein BACCAC_01479 [Bacteroides caccae ATCC 43185]
          Length = 138

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 16/136 (11%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           EI  R   E + A A S          + + E++ +F    +I  +N +Y   D  T+++
Sbjct: 14  EIKKRETTEWIKAVAAS--------YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDII 65

Query: 85  SFPTAFASSDGCSSLML-GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +F       D C    L GD+ ++ + +   A   G  ++N L  +IIHG LHL G +  
Sbjct: 66  TF-------DYCEGDRLSGDLFISLDTVRTNAEQFGASYDNELHRVIIHGILHLCGINDK 118

Query: 144 DDKDACVMEGLERSIL 159
              +  +ME  E   L
Sbjct: 119 GPGEREIMEAAENKAL 134


>gi|325268276|ref|ZP_08134909.1| metal dependent hydrolase [Prevotella multiformis DSM 16608]
 gi|324989418|gb|EGC21368.1| metal dependent hydrolase [Prevotella multiformis DSM 16608]
          Length = 139

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 14/108 (12%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           I E+  +F    +I  +N EY G D  T++++F     +      ++ GD+V++ + +  
Sbjct: 34  IGEIGYMFVGDEKILEINNEYLGHDYYTDIITFDYDEGN------VLNGDLVISLDTVRS 87

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            A +  K +E+ L  +IIHG LHL G   ++DK        ER I+E+
Sbjct: 88  NAELFHKSYEDELNRVIIHGILHLCG---INDKGPG-----EREIMEE 127


>gi|149199105|ref|ZP_01876145.1| hypothetical protein LNTAR_24389 [Lentisphaera araneosa HTCC2155]
 gi|149137894|gb|EDM26307.1| hypothetical protein LNTAR_24389 [Lentisphaera araneosa HTCC2155]
          Length = 160

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--- 86
           TL E    + ++  +   + + +    L++ FTD   IE +N ++   +  T+V+SF   
Sbjct: 13  TLAETKHIEDIALYLCDHWGLSKKHCSLNISFTDDAGIEPVNVQFLQHEGATDVISFDYL 72

Query: 87  ---PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                 FA  D     +LG+++++ E  + +A      F +  +  + HG LHL G+D  
Sbjct: 73  DDYEEEFADED--DPFVLGELLISLETAQSQAQTYDSSFNDEALLYVAHGILHLCGFDDH 130

Query: 144 DDKDACVMEGLERSILE 160
            + D   M   E   ++
Sbjct: 131 QEDDIKAMRDAEAQSMK 147


>gi|189460233|ref|ZP_03009018.1| hypothetical protein BACCOP_00870 [Bacteroides coprocola DSM 17136]
 gi|189433094|gb|EDV02079.1| hypothetical protein BACCOP_00870 [Bacteroides coprocola DSM 17136]
          Length = 140

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 14/128 (10%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
             + KAV+    K       + E++ +F    +I  +N +Y   D  T++++F       
Sbjct: 20  TAWIKAVAETYGK------KVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF------- 66

Query: 94  DGC-SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           D C  + + GD+ ++ + +   A   G  +E  L  +IIHG LHL G +     +  +ME
Sbjct: 67  DYCEGNRIAGDLFISLDTVRTNAEQFGATYETELHRVIIHGILHLCGINDKGPGEREIME 126

Query: 153 GLERSILE 160
             E   L+
Sbjct: 127 AAENKALD 134


>gi|46446688|ref|YP_008053.1| hypothetical protein pc1054 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|62901435|sp|Q6MCC1|RRMF_PARUW RecName: Full=Probable rRNA maturation factor
 gi|46400329|emb|CAF23778.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 150

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 6/123 (4%)

Query: 36  FAKAVSNLISKGYFVKENIV--ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           F+ A  + I K    KE     E+++ F D+  I  L+ +Y   D PT+ +SFP      
Sbjct: 16  FSLANLDAIVKEVIQKEQQTCDEVNIYFVDTATICKLHLDYFNDDTPTDCISFP--MDKD 73

Query: 94  DGCSSLMLGDI-VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           +     +LG+I V     IE   +     +E   ++L+ HG LHL+GYD +++ D  +M+
Sbjct: 74  ENSPYKILGEIFVCPQTAIEYALSHELDPYEETTLYLV-HGLLHLMGYDDLEENDFLIMK 132

Query: 153 GLE 155
             E
Sbjct: 133 EAE 135


>gi|150024116|ref|YP_001294942.1| hypothetical protein FP0002 [Flavobacterium psychrophilum JIP02/86]
 gi|172048599|sp|A6GVJ9|RRMF_FLAPJ RecName: Full=Probable rRNA maturation factor
 gi|149770657|emb|CAL42121.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 140

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 6/100 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++ +F D + +  +N +Y   D  T+V+SF  +          + GDI ++ E +   A
Sbjct: 35  EINYIFCDDNYLLEINQQYLNHDTLTDVISFDYSLGDE------IHGDIYISIERVRENA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           +     FE  L  ++IHG LH  GY    D D  +M   E
Sbjct: 89  DDFKVPFEEELKRVMIHGVLHYCGYKDKSDADELLMRSKE 128


>gi|229495498|ref|ZP_04389231.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317481|gb|EEN83381.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 152

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 13/120 (10%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           HLR      + + V+N + K       + ELS  FT+   I   N  +   D  T++L+F
Sbjct: 15  HLRRQIIARWIRQVANEMGK------TLGELSYKFTNDAGILEANKLFLNHDYYTDILTF 68

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
               AS +G S  + GDI+++ E +   A   G  +E  L  ++IHG LHL G   +DDK
Sbjct: 69  D---ASQEG-SEYISGDILISLETVASNAEKFGVPYEEELHRVLIHGVLHLSG---IDDK 121


>gi|293977768|ref|YP_003543198.1| hypothetical protein DMIN_00240 [Candidatus Sulcia muelleri DMIN]
 gi|292667699|gb|ADE35334.1| conserved hypothetical protein TIGR00043 [Candidatus Sulcia
           muelleri DMIN]
          Length = 141

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKEN--IVELSLVFTDSHRIETLNFEYRG 76
           N  +  + HL    E  F+K +  ++SK     EN  I EL+ +F D   +  +N +Y  
Sbjct: 3   NYYYETKFHLYN--EFYFSKWIFFVVSK-----ENKFIKELNFIFCDDQYLININNKYLN 55

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            +  T+V++F  +   +      + GDI ++ + I+  +  L K F + L  +IIH  LH
Sbjct: 56  KNYYTDVITFDNSEEKN------LDGDIFISIKRIKYNSLKLKKLFYDELKRVIIHAVLH 109

Query: 137 LLGYDHVDDKDACVMEGLE 155
           L+GY    + +  +M   E
Sbjct: 110 LIGYKDKKETEKYIMSKKE 128


>gi|213027667|ref|ZP_03342114.1| putative metalloprotease [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
 gi|213161077|ref|ZP_03346787.1| putative metalloprotease [Salmonella enterica subsp. enterica
          serovar Typhi str. E00-7866]
 gi|213583243|ref|ZP_03365069.1| putative metalloprotease [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-0664]
          Length = 85

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 11/86 (12%)

Query: 11 LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
          LDLQ+A EN       H     E  F + +  +I +  F +E  V + LV  D      L
Sbjct: 6  LDLQLACEN-------HAGLPDEAQFQRWLDGVIPQ--FQEEAEVTIRLV--DEAESHDL 54

Query: 71 NFEYRGIDKPTNVLSFPTAFASSDGC 96
          N  YRG DKPTNVLSFP     +  C
Sbjct: 55 NLTYRGKDKPTNVLSFPFEAPPALKC 80


>gi|194246695|ref|YP_002004334.1| hypothetical protein ATP_00301 [Candidatus Phytoplasma mali]
 gi|254801600|sp|B3QZV1|RRMF_PHYMT RecName: Full=Probable rRNA maturation factor
 gi|193807052|emb|CAP18488.1| conserved hypothetical protein [Candidatus Phytoplasma mali]
          Length = 148

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 9/118 (7%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +IH +T   +   K ++ ++ K +F       + ++F    +++ +NF YR  D  T+VL
Sbjct: 4   KIHNKTNISI---KYLTKILKKIFFFVPERQNIHIIFITPLKMKKMNFYYRQKDYDTDVL 60

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           SF              LGDI +  +  + ++          +  L  HG+LHL GY+H
Sbjct: 61  SFINEIDKDS------LGDIFINLKKAQKQSQNYNHSLSREVCFLATHGYLHLKGYEH 112


>gi|224023519|ref|ZP_03641885.1| hypothetical protein BACCOPRO_00221 [Bacteroides coprophilus DSM
           18228]
 gi|224016741|gb|EEF74753.1| hypothetical protein BACCOPRO_00221 [Bacteroides coprophilus DSM
           18228]
          Length = 140

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 14/130 (10%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
            + KAV+    K       + E++ +F    +I  +N +Y   D  T++++F       D
Sbjct: 21  AWIKAVAETYGK------KVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------D 67

Query: 95  GC-SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
            C  + + GD+ ++ + +   A   G  +E  L  +IIHG LHL G +     +  +ME 
Sbjct: 68  YCEGNRISGDLFISLDTVRTNAEQFGATYETELHRVIIHGILHLCGINDKGPGEREIMEA 127

Query: 154 LERSILEDLG 163
            E   L+ L 
Sbjct: 128 AENRALDMLA 137


>gi|188585826|ref|YP_001917371.1| protein of unknown function UPF0054 [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350513|gb|ACB84783.1| protein of unknown function UPF0054 [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 141

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 7/117 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEII 111
           E+ L+  D+  I+ LN +YR   K T+VLSFP          D    L+LGDIV++   +
Sbjct: 23  EVGLMIVDAETIKELNRDYRNQYKSTDVLSFPQYQEDDLVERDSDDYLLLGDIVISESAV 82

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG---LERSILEDLGIN 165
             +A+  G   E  L  L +HG LHLLGYDH  ++     E    L+  IL  LGI 
Sbjct: 83  LDQADKYGHSIERELAFLFLHGLLHLLGYDHEKEEAQSEEESMFVLQEEILSSLGIT 139


>gi|311695360|gb|ADP98233.1| predicted metal-dependent hydrolase [marine bacterium HP15]
          Length = 44

 Score = 44.7 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           LHL G+DH++D+DA VME LE  +L  LG  +PYE +
Sbjct: 2   LHLQGFDHIEDEDAEVMEALEVRLLAQLGFGNPYEAE 38


>gi|213962456|ref|ZP_03390718.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
 gi|213954782|gb|EEB66102.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
          Length = 139

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++ +F D   +  +N EY   D  T++++F            ++  DI ++ E ++  A 
Sbjct: 37  INYIFCDDEYLHKINVEYLQHDTLTDIITFDYT------EEKVLHSDIYISVERVKENAE 90

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +    F+  L+ ++ HG LHL GY     KD+ +M   E  ++
Sbjct: 91  IFKVPFQRELLRVLAHGLLHLCGYKDKTPKDSALMRQKEEEMM 133


>gi|242279255|ref|YP_002991384.1| hypothetical protein Desal_1783 [Desulfovibrio salexigens DSM 2638]
 gi|242122149|gb|ACS79845.1| protein of unknown function UPF0054 [Desulfovibrio salexigens DSM
           2638]
          Length = 151

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I  +N E+ G   PTNVLSFP +  + D   +  LG+IVL+ + +  E  + G++ E H 
Sbjct: 50  IAEVNEEFLGCVGPTNVLSFPFS-ETPDLEKNSFLGEIVLSVDTLARETRLYGQQPEEHT 108

Query: 127 VHLIIHGFLHLLGYDH 142
           V L+ H  LHL GYDH
Sbjct: 109 VRLLAHALLHLAGYDH 124


>gi|225010333|ref|ZP_03700805.1| protein of unknown function UPF0054 [Flavobacteria bacterium
           MS024-3C]
 gi|225005812|gb|EEG43762.1| protein of unknown function UPF0054 [Flavobacteria bacterium
           MS024-3C]
          Length = 148

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           S+GY    ++  LS +F +   +  LN  Y   D  T++++F       +G  +++ GDI
Sbjct: 37  SEGY----SVAALSYIFCNDQYLLELNQSYLSHDTFTDIITFDYV----EG--TIISGDI 86

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            ++ + +E  A +    FE   + ++ HG LHL+GY     +D  VM   E
Sbjct: 87  FISVDRLEENAAIFKVSFEEERLRVMAHGLLHLMGYKDKSAEDQLVMSNKE 137


>gi|222151469|ref|YP_002560625.1| hypothetical protein MCCL_1222 [Macrococcus caseolyticus JCSC5402]
 gi|254799990|sp|B9E6W1|RRMF_MACCJ RecName: Full=Probable rRNA maturation factor
 gi|222120594|dbj|BAH17929.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 154

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 3/113 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEII 111
            E+++ F D + I+ +N  YR  D  T+V+SF       D        +LGDI++  +  
Sbjct: 38  AEVAVSFVDENEIQAINKAYRNKDAVTDVISFALEEGEDDFEMSDEPRVLGDIIICVKRA 97

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +A   G  FE  L  L +HG LHLLGYDH+++ D   M G +  IL   G+
Sbjct: 98  LEQAEEYGHSFERELGFLSLHGLLHLLGYDHMNESDEARMFGRQDEILNAFGL 150


>gi|154249670|ref|YP_001410495.1| hypothetical protein Fnod_0988 [Fervidobacterium nodosum Rt17-B1]
 gi|154153606|gb|ABS60838.1| protein of unknown function UPF0054 [Fervidobacterium nodosum
           Rt17-B1]
          Length = 147

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           V++S +F     +  +N +YRG D  T+VL+F   + ++         +  L  E I   
Sbjct: 33  VDVSFIFITPETMAEMNKQYRGKDGATDVLTF--VYGNNAEGEEEPYSEGYLCLEKILEN 90

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +   G   E  L+ +++H  LH+ GYDH
Sbjct: 91  SKEFGNSLEKELLTVLVHSILHMAGYDH 118


>gi|325105734|ref|YP_004275388.1| protein of unknown function UPF0054 [Pedobacter saltans DSM 12145]
 gi|324974582|gb|ADY53566.1| protein of unknown function UPF0054 [Pedobacter saltans DSM 12145]
          Length = 145

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K+ + EL+ +      +  +N EY   D  T++++F  +    +G   ++ GD+ ++ E 
Sbjct: 35  KKELQELNFILCSDEYLLKINQEYLNHDTYTDIITFDNS--EDEG---MIYGDVFISIER 89

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           ++  A + G +  + L  +IIHG LHLLGY     ++  +M
Sbjct: 90  VKENARIFGVKTADELHRVIIHGTLHLLGYPDKKKQEKALM 130


>gi|54607131|ref|NP_766138.3| rRNA maturation factor homolog [Mus musculus]
 gi|47115797|sp|Q8CAV0|YBEY_MOUSE RecName: Full=rRNA maturation factor homolog
 gi|26332258|dbj|BAC29859.1| unnamed protein product [Mus musculus]
 gi|74202099|dbj|BAE23037.1| unnamed protein product [Mus musculus]
 gi|148699903|gb|EDL31850.1| RIKEN cDNA A130042E20 [Mus musculus]
          Length = 164

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSF          F          LGDI L  
Sbjct: 36  DLGIICVDNKTIQNINRIYRNKNVPTDVLSFSFHENLKAGEFPQPHSPDDYNLGDIFLGV 95

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I ++     +++ + L     HG  HLLG+ H    +   M   E+ +LE+L 
Sbjct: 96  EYI-LQHCRESEDYCDVLTVTATHGLCHLLGFTHSSKAEWQKMYNQEKLVLEELS 149


>gi|294675104|ref|YP_003575720.1| hypothetical protein PRU_2470 [Prevotella ruminicola 23]
 gi|294471648|gb|ADE81037.1| conserved hypothetical protein TIGR00043 [Prevotella ruminicola 23]
          Length = 140

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 8/109 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEI 110
           + + E+  +F +  +I  +N ++ G D  T++++F       D C    + GDI ++ + 
Sbjct: 32  KKVGEIGYLFVNDEKILEVNNQFLGHDYYTDIITF-------DYCEGKTISGDIYISVDT 84

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   A+  G+ ++  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 85  VFTNADKFGRPYDEELHRVIIHGILHLCGINDKGPGEREIMEAAEDKAL 133


>gi|119357533|ref|YP_912177.1| hypothetical protein Cpha266_1736 [Chlorobium phaeobacteroides DSM
           266]
 gi|145572761|sp|A1BH76|RRMF_CHLPD RecName: Full=Probable rRNA maturation factor
 gi|119354882|gb|ABL65753.1| protein of unknown function UPF0054 [Chlorobium phaeobacteroides
           DSM 266]
          Length = 142

 Score = 44.3 bits (103), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 9/127 (7%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L E V  + V+ ++ +  F+ E++V    V+  +  I  +N E+ G D PT+ ++F  
Sbjct: 13  RELAESVLTEVVTTVLQEEGFLIESLV---AVYCGNKMIHRINREFLGHDYPTDTITFSY 69

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +  S       + G+  ++ + +E  A      F+  L+ + IH  LHL GY    D++ 
Sbjct: 70  SKGSE------IDGEFYISLDAVEENALRYKVGFDEELMRVTIHSALHLAGYQDGKDEER 123

Query: 149 CVMEGLE 155
             M+  E
Sbjct: 124 VQMQEKE 130


>gi|297568434|ref|YP_003689778.1| pyridoxal phosphate biosynthetic protein PdxJ [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924349|gb|ADH85159.1| pyridoxal phosphate biosynthetic protein PdxJ [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 398

 Score = 44.3 bits (103), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEI 113
           ELSL+  D  +++  N  +R  ++PTNVL+F    A     G    MLGD+V++ +    
Sbjct: 37  ELSLLLVDDRQMQEFNHLFRQRNRPTNVLAFAQREAPEIPGGLGDEMLGDVVISLDTARR 96

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           EA   G    + L  L+ HG LHLLGYDH
Sbjct: 97  EARAAGVSPGHRLAWLLTHGLLHLLGYDH 125


>gi|213029864|ref|ZP_03344311.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 43

 Score = 44.3 bits (103), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 24/34 (70%)

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           LHLLGYDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 3   LHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPY 36


>gi|86134802|ref|ZP_01053384.1| uncharacterized protein family UPF0054 [Polaribacter sp. MED152]
 gi|85821665|gb|EAQ42812.1| uncharacterized protein family UPF0054 [Polaribacter sp. MED152]
          Length = 137

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++ +F D   +  LN ++   D  T+++SF  +         L+ GDI ++ E ++  A
Sbjct: 35  EINYIFCDDAYLHKLNVKFLNHDTLTDIISFDNSLGK------LLNGDIFISVERVKDNA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +     F   L  ++IHG LH +GY     KD    E  E    E+L I
Sbjct: 89  DDFKVSFHEELHRVMIHGILHYMGY-----KDKSEDEKKEMRKQENLAI 132


>gi|161833656|ref|YP_001597852.1| hypothetical protein SMGWSS_025 [Candidatus Sulcia muelleri GWSS]
 gi|172048393|sp|A8Z5Q5|RRMF_SULMW RecName: Full=Probable rRNA maturation factor
 gi|152206145|gb|ABS30455.1| conserved hypothetical protein SMGWSS_025 [Candidatus Sulcia
           muelleri GWSS]
          Length = 141

 Score = 43.9 bits (102), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 15/139 (10%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKEN--IVELSLVFTDSHRIETLNFEYRG 76
           N  +  + HL    E  F+K +  ++SK     EN  I EL+ +F D   +  +N +Y  
Sbjct: 3   NYYYETKFHLYN--EFYFSKWIFFVVSK-----ENKFIKELNFIFCDDQYLININNKYLN 55

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            +  T+V++F     S D     + GDI ++ + I+  +    K F + L  +IIH  LH
Sbjct: 56  KNYYTDVITFDN---SEDKN---LDGDIFISIKRIKYNSLKFKKLFYDELKRVIIHAVLH 109

Query: 137 LLGYDHVDDKDACVMEGLE 155
           L+GY    + +  +M   E
Sbjct: 110 LIGYKDKKETEKYIMSKKE 128


>gi|153005571|ref|YP_001379896.1| hypothetical protein Anae109_2711 [Anaeromyxobacter sp. Fw109-5]
 gi|166228436|sp|A7HDW6|RRMF_ANADF RecName: Full=Probable rRNA maturation factor
 gi|152029144|gb|ABS26912.1| protein of unknown function UPF0054 [Anaeromyxobacter sp. Fw109-5]
          Length = 192

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+S++     RI  LN E+RG D  T+VLSFP +     G    +LGD+V++ +     
Sbjct: 35  AEISILLVGDRRIRALNREWRGKDAATDVLSFPLSEPPGSGP---LLGDVVISLDTAARR 91

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           A    +     L   + HG LHLLGYDH    DA  M
Sbjct: 92  ARQERRAVGAELDRYLAHGLLHLLGYDHERPADARRM 128


>gi|332879991|ref|ZP_08447675.1| translation metalloprotein YbeY [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332681987|gb|EGJ54900.1| translation metalloprotein YbeY [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 138

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 6/104 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + I +++ +F D   +  +N +Y   D  T++++F      ++G +  +  DI ++ E +
Sbjct: 32  KKIGDINYIFCDDVYLHKINVQYLQHDTLTDIITFD----YTEGIT--LNSDIYISIERV 85

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
              A++ G  FE  L+ ++ HG LHL GY      D+ +M   E
Sbjct: 86  RENADIFGVTFEQELLRVLAHGILHLCGYKDKTPADSELMRAKE 129


>gi|301107293|ref|XP_002902729.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262098603|gb|EEY56655.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 136

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAYEII 111
           ++ TD+H ++ LN  +R  DKPT++LSF       P  F          LGDI ++   +
Sbjct: 46  MLTTDTH-VQKLNRRFRKKDKPTDILSFPFHKVRAPGRFPRIRAREERYLGDIYISPAYV 104

Query: 112 EIEANVLGKE----FENHLVHLIIHGFLHLLG 139
           + +      E     E  L  L+ HG  HLLG
Sbjct: 105 QRQCEDPQLEEITTLEERLPVLMAHGLCHLLG 136


>gi|189464937|ref|ZP_03013722.1| hypothetical protein BACINT_01281 [Bacteroides intestinalis DSM
           17393]
 gi|189437211|gb|EDV06196.1| hypothetical protein BACINT_01281 [Bacteroides intestinalis DSM
           17393]
          Length = 136

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 8/110 (7%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYE 109
           ++ + E++ +F    +I  +N  Y   D  T++++F       D C    L GD+ ++ +
Sbjct: 31  EKRVGEIAYIFCSDEKILEVNRHYLQHDYYTDIITF-------DYCEGNRLSGDLFISLD 83

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +   A   G ++E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 84  TVRTNAEQFGSDYETELHRVIIHGILHLCGINDKGPGEREIMEEAENRAL 133


>gi|167737213|ref|ZP_02409987.1| hypothetical protein Bpse14_04056 [Burkholderia pseudomallei 14]
          Length = 231

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 121 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 172

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F    A  +    + + D+VL   ++E EA   GK    H  H
Sbjct: 173 ALNHSYRHKDYATNVLTF----AYGEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 228

Query: 129 LII 131
           L++
Sbjct: 229 LLV 231


>gi|313813039|gb|EFS50753.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL025PA1]
 gi|327330796|gb|EGE72542.1| putative metalloprotease [Propionibacterium acnes HL097PA1]
          Length = 155

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 4/100 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEII 111
           ELS++  D   +E  + ++ G+  PT+VLSFP     A    +   S +LGDIVL   + 
Sbjct: 35  ELSIILVDEETMEAYHEKFMGLPGPTDVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVT 94

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             +A   G+  +    +L+IHG LHLLGYDH +  +  VM
Sbjct: 95  ARQAAENGRTPDGEAEYLLIHGLLHLLGYDHAEPGEKRVM 134


>gi|189499926|ref|YP_001959396.1| hypothetical protein Cphamn1_0971 [Chlorobium phaeobacteroides BS1]
 gi|238692296|sp|B3EPY3|RRMF_CHLPB RecName: Full=Probable rRNA maturation factor
 gi|189495367|gb|ACE03915.1| protein of unknown function UPF0054 [Chlorobium phaeobacteroides
           BS1]
          Length = 138

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 9/134 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R + E    + + ++I    FV + +V    VF     I+ +N E+ G D  T+ ++F  
Sbjct: 11  RVIPEEKLERVIRHVIEAEGFVPDVVV---AVFCGDRLIQRINREHLGHDYATDTITFRY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                      + G+  ++ ++I+  +      FEN L  + IH  LHL GYD   D+  
Sbjct: 68  ------NSGREIEGEFYVSLDVIDKNSRRFKTGFENELFRVAIHSALHLAGYDDSGDEAR 121

Query: 149 CVMEGLERSILEDL 162
             M+  E   L  L
Sbjct: 122 AGMKKREDRYLSQL 135


>gi|29348692|ref|NP_812195.1| hypothetical protein BT_3283 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|62901447|sp|Q8A2M2|RRMF_BACTN RecName: Full=Probable rRNA maturation factor
 gi|29340597|gb|AAO78389.1| conserved hypothetical protein with conserved domain [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 137

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCQGDRLSGDLFISLDTIRTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +++ L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 90  AEQFGAAYDDELHRVIIHGILHLCGINDKGPGEREIMEEAENKAL 134


>gi|298387060|ref|ZP_06996614.1| metalloprotease [Bacteroides sp. 1_1_14]
 gi|298260210|gb|EFI03080.1| metalloprotease [Bacteroides sp. 1_1_14]
          Length = 137

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 18/108 (16%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCQGDRLSGDLFISLDTIRTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL-ERSILED 161
           A   G  +++ L  +IIHG LHL G   ++DK      GL ER I+E+
Sbjct: 90  AEQFGAAYDDELHRVIIHGILHLCG---INDK------GLGEREIMEE 128


>gi|145219509|ref|YP_001130218.1| hypothetical protein Cvib_0701 [Prosthecochloris vibrioformis DSM
           265]
 gi|189040581|sp|A4SE07|RRMF_PROVI RecName: Full=Probable rRNA maturation factor
 gi|145205673|gb|ABP36716.1| protein of unknown function UPF0054 [Chlorobium phaeovibrioides DSM
           265]
          Length = 148

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 9/135 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L E    KAV  ++S+        V +  ++     +  +N E+ G D  T+ ++FP 
Sbjct: 11  RALPEAKLKKAVRLVLSE---EGGKAVSIDAIYCGGRMMRRINREFLGHDYDTDTVTFPY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
               S+G   ++ G+  ++ + +   A      FE  L+ + IH  LHLLGYD    ++ 
Sbjct: 68  ----SEGL--VVEGEFYVSLDEVGRNAVRFKSGFEQELLRVTIHSVLHLLGYDDASPEER 121

Query: 149 CVMEGLERSILEDLG 163
             M   E   L  LG
Sbjct: 122 GRMRQKEDRYLRILG 136


>gi|304383689|ref|ZP_07366148.1| possible metal dependent hydrolase [Prevotella marshii DSM 16973]
 gi|304335213|gb|EFM01484.1| possible metal dependent hydrolase [Prevotella marshii DSM 16973]
          Length = 140

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-SSLMLGDIVLAYEIIEIE 114
           ++  +F + ++I  +N ++   D  T+V++F       D C  + + GDIV++ + +   
Sbjct: 38  DIGYMFVNDNKILEINRQFLQHDYYTDVITF-------DDCDGNTINGDIVISLDTVRSN 90

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A + GK +   L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 91  AKLYGKPYGEELHRVIIHGILHLCGLNDKGPGERELMEAAEDRAL 135


>gi|332884625|gb|EGK04882.1| metalloprotease [Dysgonomonas mossii DSM 22836]
          Length = 139

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 6/88 (6%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + ++S VF    +I  +N +Y   D  T++++F   +  +D    ++ GDI ++ + +
Sbjct: 33  KQVGDISFVFCSDKKILEVNNQYLQHDYYTDIITFD--YTEND----IISGDIFISVDTV 86

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLG 139
           +  +   G  +E  L  +IIHG LHL G
Sbjct: 87  KSNSETFGTNYEEELNRIIIHGILHLCG 114


>gi|167764038|ref|ZP_02436165.1| hypothetical protein BACSTE_02421 [Bacteroides stercoris ATCC
           43183]
 gi|167698154|gb|EDS14733.1| hypothetical protein BACSTE_02421 [Bacteroides stercoris ATCC
           43183]
          Length = 137

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 9/110 (8%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEI 110
           + I E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + 
Sbjct: 32  KRIGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGNRLSGDLFISLDT 84

Query: 111 IEIEA-NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   A    G ++E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 85  VRTNAEQFAGNDYERELYRVIIHGILHLCGINDKGPGEREIMEAAENKAL 134


>gi|53711447|ref|YP_097439.1| hypothetical protein BF0156 [Bacteroides fragilis YCH46]
 gi|60679714|ref|YP_209858.1| hypothetical protein BF0118 [Bacteroides fragilis NCTC 9343]
 gi|253564495|ref|ZP_04841952.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764843|ref|ZP_06093118.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|62901265|sp|Q650C1|RRMF_BACFR RecName: Full=Probable rRNA maturation factor
 gi|81317213|sp|Q5LIY0|RRMF_BACFN RecName: Full=Probable rRNA maturation factor
 gi|52214312|dbj|BAD46905.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60491148|emb|CAH05896.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|251948271|gb|EES88553.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263254227|gb|EEZ25661.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301161178|emb|CBW20716.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 139

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 8/110 (7%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYE 109
           ++ I E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ E
Sbjct: 32  EKRIGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGNRLSGDLFISLE 84

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            ++  +      +E  L   IIHG LHL G +     +  +ME  E   L
Sbjct: 85  TVKTNSEQFNTPYEEELHRTIIHGILHLCGINDKGPGEREIMEAAENKAL 134


>gi|33860742|ref|NP_892303.1| hypothetical protein PMM0182 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|46577388|sp|Q7V3A1|RRMF_PROMP RecName: Full=Probable rRNA maturation factor
 gi|33633684|emb|CAE18641.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 180

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFP--TAFASSDGCSSLMLGDIVLAYEIIEIE 114
           LSL   + + I ++N ++      T+VLSFP  +   ++   + + LGD+ ++ E    +
Sbjct: 72  LSLQIINDNEISSINQKWMNKSGSTDVLSFPIISDEDTTKDLNFIELGDLFISLETAFKQ 131

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +       +  ++ L  HG LHLLG++H DD +   M   +  ++  L
Sbjct: 132 SLEFNHSIKKEMLWLASHGLLHLLGWEHNDDYELDNMLNFQEYLISKL 179


>gi|253568963|ref|ZP_04846373.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251840982|gb|EES69063.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 137

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + I   
Sbjct: 37  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGDRLSGDLFISLDTIRTN 89

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A   G  +++ L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 90  AEQFGAAYDDELHRVIIHGILHLCGINDKGPGEREIMEEAENKAL 134


>gi|153812738|ref|ZP_01965406.1| hypothetical protein RUMOBE_03145 [Ruminococcus obeum ATCC 29174]
 gi|149831098|gb|EDM86187.1| hypothetical protein RUMOBE_03145 [Ruminococcus obeum ATCC 29174]
          Length = 133

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSS--------LML 101
           ++LV TD+  I+ +N E+R I  PT+VLSF       P  ++  +G  S        L+L
Sbjct: 40  VNLVITDNEEIKRVNTEFRSIGAPTDVLSFPMIPFKTPADYSVIEGDDSYFDLDTDELIL 99

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           GD++++ + +  +A   G   E     L  H  L
Sbjct: 100 GDVMISVDKVYAQAEEYGHSTEREFSFLFAHSML 133


>gi|282891330|ref|ZP_06299832.1| hypothetical protein pah_c050o119 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498827|gb|EFB41144.1| hypothetical protein pah_c050o119 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 152

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 2/108 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ + F    ++  L+ +Y     PT+ +SFP      +     +LG+I +  E      
Sbjct: 36  EVIIHFISDKKMRELHAQYFNDPSPTDCISFP--LDGPEETHYRVLGEIFVCPETAVKYT 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
              G +         IHG LHL+GYD +   D   M   E+  LE L 
Sbjct: 94  EQHGGDPYTETALYTIHGLLHLMGYDDIKKTDQKAMRAAEKKHLEHLA 141


>gi|239917734|ref|YP_002957292.1| conserved hypothetical protein TIGR00043 [Micrococcus luteus NCTC
           2665]
 gi|281413771|ref|ZP_06245513.1| hypothetical protein MlutN2_00957 [Micrococcus luteus NCTC 2665]
 gi|259645756|sp|C5CCC6|RRMF_MICLC RecName: Full=Probable rRNA maturation factor
 gi|239838941|gb|ACS30738.1| conserved hypothetical protein TIGR00043 [Micrococcus luteus NCTC
           2665]
          Length = 157

 Score = 42.7 bits (99), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 4/117 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEII 111
            E ++   D+ R+  L+ E+  +  PT+V+S P       S +  +  +LGD+VL  E+ 
Sbjct: 35  AETAVTVVDAARMAELHEEWMDLPGPTDVMSLPMDELTPGSPEAPAEGVLGDVVLCPEVA 94

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE-RSILEDLGINDP 167
             +A   G   ++ L+ L+ HG LHLLGYDHV+D +   M  L+ R + E LG   P
Sbjct: 95  AEQAARGGHSRDDELLLLLTHGMLHLLGYDHVEDAEREEMFTLQDRLVSEVLGRPAP 151


>gi|325109207|ref|YP_004270275.1| metalloprotease ybeY [Planctomyces brasiliensis DSM 5305]
 gi|324969475|gb|ADY60253.1| metalloprotease ybeY [Planctomyces brasiliensis DSM 5305]
          Length = 162

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 1/117 (0%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+ ++  D+  I  +N  +   D PT+V++FP            +  +IV++ E+    
Sbjct: 41  AEIHVLLVDNPTIHAMNVAHLEHDFPTDVITFPLNDTDQQPPDYPLEAEIVISTEMAAEM 100

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           A   G   E      ++H  LHL G+D + +     M   E  +L  LG+  P E D
Sbjct: 101 AGEAGWSAEEEATLYLVHSLLHLCGFDDLTEDAQREMRQRELEMLHHLGMK-PSETD 156


>gi|325954630|ref|YP_004238290.1| metalloprotease ybeY [Weeksella virosa DSM 16922]
 gi|323437248|gb|ADX67712.1| metalloprotease ybeY [Weeksella virosa DSM 16922]
          Length = 139

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 6/113 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           ++I EL+ +F D   +  +N +Y   D  T+V+ F  +       + ++ GDI ++   I
Sbjct: 31  KSIGELNYIFCDDEYLLAINQQYLDHDYYTDVIGFDNS------ENDVLHGDIFISVTRI 84

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              A      F+N L  ++IHG LH  GY   + +D   M   E   L    +
Sbjct: 85  AENAQNNAVSFQNELARVMIHGILHFAGYLDYEKEDKAEMTAKENFYLNKFSL 137


>gi|224372821|ref|YP_002607193.1| putative metalloprotease [Nautilia profundicola AmH]
 gi|254806612|sp|B9L985|RRMF_NAUPA RecName: Full=Probable rRNA maturation factor
 gi|223589812|gb|ACM93548.1| conserved hypothetical protein [Nautilia profundicola AmH]
          Length = 139

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 7/109 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+ TD   I+ LN ++R  DK T+VLSFP      +    + LG IV++ +  +  A
Sbjct: 28  DIELILTDDEEIKELNSQFRNKDKATDVLSFPL-----EAMPGMPLGSIVISIDTAKKGA 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              G   ++ +  L +HG LHLLGYDH  + D   M   E  I++ L +
Sbjct: 83  EEFGHSVDDEIRLLFLHGLLHLLGYDH--ETDNGEMRAKEEEIIKKLNL 129


>gi|218247079|ref|YP_002372450.1| hypothetical protein PCC8801_2275 [Cyanothece sp. PCC 8801]
 gi|257060149|ref|YP_003138037.1| hypothetical protein Cyan8802_2326 [Cyanothece sp. PCC 8802]
 gi|218167557|gb|ACK66294.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 8801]
 gi|256590315|gb|ACV01202.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 8802]
          Length = 178

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 7/127 (5%)

Query: 46  KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSS 98
           K      +  EL+L  T+   I+TLN +YR  ++PT+VL+F       P           
Sbjct: 49  KPNLPPADTYELTLRLTEDLEIQTLNAQYRQKNQPTDVLAFAALEVDFPVPAEEIAALEP 108

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L LGDI+++ E    +A          L  L  HG LHLLG+DH D+     M   + ++
Sbjct: 109 LYLGDIIISVETANKQAQQNHHSLLVELAWLAAHGLLHLLGWDHPDEDSLEAMLSQQETL 168

Query: 159 LEDLGIN 165
           L  +G+ 
Sbjct: 169 LTLVGLQ 175


>gi|323457282|gb|EGB13148.1| hypothetical protein AURANDRAFT_18863 [Aureococcus anophagefferens]
          Length = 213

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 27/132 (20%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC----------SSLMLGDIV 105
           ++ +  T    I   N  +RG+ K T++LSFP     + G             L LGD+V
Sbjct: 72  DVGIWLTTDATIRKYNTRFRGMRKSTDILSFPFHDELAPGALPDAVDRDDEDDLNLGDMV 131

Query: 106 LAYEIIEIEANVLG-----------------KEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           ++   +   A   G                  + E  +  L++HG  HLL YDH  D + 
Sbjct: 132 VSVPYVRRRAEKDGGRDHAPGRGVAAAMAPVADVEERIHMLLVHGLCHLLNYDHETDDEF 191

Query: 149 CVMEGLERSILE 160
             M  LE  +LE
Sbjct: 192 EDMVALEDELLE 203


>gi|86131105|ref|ZP_01049704.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85818516|gb|EAQ39676.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 135

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K+ + EL+ +F D   +  +N ++   D  T+++SF     +      ++ GD+ ++ E 
Sbjct: 30  KKIVGELNYIFCDDAYLHKINVDFLDHDTFTDIISFDYTQGN------VVSGDMYISVER 83

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +E  A      F + L  +++HG LH  GY     ++A +M   E + L
Sbjct: 84  VEENAQDFNCSFRDELSRVMVHGILHYCGYKDKSIEEAKLMRSKENTYL 132


>gi|149278196|ref|ZP_01884334.1| hypothetical protein PBAL39_11582 [Pedobacter sp. BAL39]
 gi|149230962|gb|EDM36343.1| hypothetical protein PBAL39_11582 [Pedobacter sp. BAL39]
          Length = 143

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL+ +      +  +N EY   D  T+V++F  + A       ++ GDI ++ E I+  A
Sbjct: 40  ELNFILCSDEYLLRINQEYLNHDTYTDVITFDHSEALK-----MIAGDIFISIERIQENA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGY 140
              G   +  L  ++IHG LHLLGY
Sbjct: 95  KNFGHTTQQELCRVMIHGTLHLLGY 119


>gi|88855036|ref|ZP_01129701.1| hypothetical protein A20C1_04121 [marine actinobacterium PHSC20C1]
 gi|88815564|gb|EAR25421.1| hypothetical protein A20C1_04121 [marine actinobacterium PHSC20C1]
          Length = 153

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEI 110
            EL +VF D   +E L+ ++     PT+VLSFP              + +LGDIV+  ++
Sbjct: 35  AELGIVFVDEAAMEQLHVQWMDEPGPTDVLSFPMDELRPGTEDRQTPAGLLGDIVVCPQV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L  HG LHLLG+DH + ++   M GL+R IL
Sbjct: 95  AISQAETAGHPPLEEMLLLTTHGLLHLLGFDHAEPEEEKEMFGLQREIL 143


>gi|218131741|ref|ZP_03460545.1| hypothetical protein BACEGG_03362 [Bacteroides eggerthii DSM 20697]
 gi|317474643|ref|ZP_07933917.1| hypothetical protein HMPREF1016_00896 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217986044|gb|EEC52383.1| hypothetical protein BACEGG_03362 [Bacteroides eggerthii DSM 20697]
 gi|316909324|gb|EFV31004.1| hypothetical protein HMPREF1016_00896 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 137

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYE 109
           ++ I E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ +
Sbjct: 31  EKRIGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGNRLSGDLFISLD 83

Query: 110 IIEIEA-NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +   A    G ++E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 84  TVRTNAEQFAGNDYERELHRVIIHGILHLCGINDKGPGEREIMEAAENKAL 134


>gi|325281349|ref|YP_004253891.1| metalloprotease ybeY [Odoribacter splanchnicus DSM 20712]
 gi|324313158|gb|ADY33711.1| metalloprotease ybeY [Odoribacter splanchnicus DSM 20712]
          Length = 143

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIEA 115
           ++ +F D   I  +N +Y   D  T+V++F       D C   +L GD+ ++ + ++  +
Sbjct: 41  INFIFCDDDYILAVNRQYLKHDYYTDVITF-------DYCEGDILSGDVFISLDTVKSNS 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            +    FEN    +I H  LHL+G+    D D+  M   E   L+
Sbjct: 94  EMFSTFFENEFCRVICHSVLHLIGFKDKTDVDSKEMRKNENICLD 138


>gi|323359831|ref|YP_004226227.1| metal-dependent hydrolase [Microbacterium testaceum StLB037]
 gi|323276202|dbj|BAJ76347.1| predicted metal-dependent hydrolase [Microbacterium testaceum
           StLB037]
          Length = 155

 Score = 42.0 bits (97), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---AFASSDGCSSL-MLGDIVLAYEI 110
            ++++V  D   +E+L+ ++     PT+VLSFP       S D  +   +LGDIVL   +
Sbjct: 35  ADVAIVLVDEGAMESLHVQWMDEPGPTDVLSFPMDELRPGSEDAPTPAGLLGDIVLCPSV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            E +A       ++ L+ L  HG LHLLG+DH +  +   M GL+R ++
Sbjct: 95  AEAQAVTAQHSTQDELILLTTHGLLHLLGFDHAEPDEEREMFGLQRELI 143


>gi|329956354|ref|ZP_08296951.1| translation metalloprotein YbeY [Bacteroides clarus YIT 12056]
 gi|328524251|gb|EGF51321.1| translation metalloprotein YbeY [Bacteroides clarus YIT 12056]
          Length = 137

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 9/111 (8%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYE 109
           ++ + E++ +F    +I  +N  Y   D  T++++F       D C    L GD+ ++ +
Sbjct: 31  EKRVGEIAYIFCSDEKILEVNRRYLQHDYYTDIITF-------DYCEGNRLSGDLFISLD 83

Query: 110 IIEIEA-NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +   A    G ++E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 84  TVRTNAEQFAGNDYERELYRVIIHGILHLCGINDKGPGEREIMEAAENKAL 134


>gi|257460682|ref|ZP_05625783.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
 gi|257442013|gb|EEV17155.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
          Length = 209

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           +LG +V+  +++E++A  LG   ++    L  HG LH+LGYDH  D
Sbjct: 134 LLGSVVINLDLVELKAAQLGHGRDDETALLFTHGLLHVLGYDHESD 179



 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 59 LVFTDSHRIETLNFEYRGIDKPTNVLSF---PTAFA 91
          L+F     +  LN + RGIDK T+VLSF   P AFA
Sbjct: 26 LIFVRGEEMRQLNAQTRGIDKATDVLSFPLDPAAFA 61


>gi|329960651|ref|ZP_08298994.1| translation metalloprotein YbeY [Bacteroides fluxus YIT 12057]
 gi|328532524|gb|EGF59318.1| translation metalloprotein YbeY [Bacteroides fluxus YIT 12057]
          Length = 137

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 9/110 (8%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEI 110
           + I E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + 
Sbjct: 32  KRIGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGNRLSGDLFISLDT 84

Query: 111 IEIEA-NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   A    G ++E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 85  VRTNAEQFAGNDYERELYRVIIHGILHLCGINDKGPGEREIMEEAENKAL 134


>gi|327403529|ref|YP_004344367.1| metalloprotease ybeY [Fluviicola taffensis DSM 16823]
 gi|327319037|gb|AEA43529.1| metalloprotease ybeY [Fluviicola taffensis DSM 16823]
          Length = 146

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 6/104 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++SL+F     +  +N EY   D  T++++F   +   D    L+ GD+ ++ + +   A
Sbjct: 37  DISLIFCSDEHLLEMNREYLQHDFFTDIITFD--YTEED----LVSGDLFISVDRVRDNA 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +     F++ L  + +HG LHL GY    D+D  +M   E  +L
Sbjct: 91  DEFDVLFQDELHRVCVHGLLHLCGYKDKSDEDEKLMRQKENDML 134


>gi|298711736|emb|CBJ32782.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 296

 Score = 41.6 bits (96), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 43/147 (29%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-AFASSDGC-------SSLMLGD--IV 105
           ++  V T    +  LN +YRG+   T++LSFP    + S G        + + LGD  I 
Sbjct: 139 DVGAVLTTDKEVFRLNRQYRGMSTSTDILSFPNHDMSGSPGVLPKVRFPAEMDLGDMFIS 198

Query: 106 LAYEIIEI----------------------------EANVLGK-----EFENHLVHLIIH 132
           LAY   +I                            E  V G      + +     L++H
Sbjct: 199 LAYVDRQIKRDREEQAAAVAAAAAGGGGQEEEWWDSERGVSGAMSRVFDVQERASMLLVH 258

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSIL 159
           G +HLLGYDH  + D   M  +E  +L
Sbjct: 259 GLIHLLGYDHETESDYKAMVAVEEEVL 285


>gi|307110839|gb|EFN59074.1| hypothetical protein CHLNCDRAFT_13914 [Chlorella variabilis]
          Length = 109

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 23/32 (71%)

Query: 55 VELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
          +ELSLV  D   +  LN E+RG+D PT+VLSF
Sbjct: 11 LELSLVLCDDAHMRGLNAEWRGVDAPTDVLSF 42


>gi|298373323|ref|ZP_06983312.1| metalloprotease [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274375|gb|EFI15927.1| metalloprotease [Bacteroidetes oral taxon 274 str. F0058]
          Length = 136

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++S +F D  +I  +N ++   D  T+V++F   +   D    ++ GDI ++ E +E  A
Sbjct: 36  DVSFIFCDDIKILEINKQFLNHDYYTDVITFD--YTEGD----VIGGDIFISLETVESNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLG 139
                 F+N L  ++IHG LHL G
Sbjct: 90  KEFLTTFDNELKRVMIHGILHLCG 113


>gi|313203915|ref|YP_004042572.1| hypothetical protein Palpr_1441 [Paludibacter propionicigenes WB4]
 gi|312443231|gb|ADQ79587.1| protein of unknown function UPF0054 [Paludibacter propionicigenes
           WB4]
          Length = 138

 Score = 41.6 bits (96), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAY 108
           F  + + E++ +F    RI  +N +Y   D  T++++F  +       SS++ GDI ++ 
Sbjct: 29  FYGKKVGEIAYIFCSDERILEINKQYLNHDYYTDIITFDYS------ESSVISGDIFISI 82

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           + ++  A       E  L  ++IHG LHL G
Sbjct: 83  DTVKSNAEEFNVSIEEELKRILIHGILHLCG 113


>gi|303326746|ref|ZP_07357188.1| cupin domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862734|gb|EFL85666.1| cupin domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 141

 Score = 41.2 bits (95), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 10/93 (10%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VEL L+  D   +   N  +     PTNVLSFP      D     + G ++L+ + +  E
Sbjct: 43  VELHLL--DDAAVSAANRRFMNCIGPTNVLSFP---GGED-----LPGILLLSLDTLARE 92

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             + G+E   H + L+ HG  HL G DH    D
Sbjct: 93  CLLYGQEPAEHALRLLAHGMGHLAGLDHGPAMD 125


>gi|255010260|ref|ZP_05282386.1| hypothetical protein Bfra3_14062 [Bacteroides fragilis 3_1_12]
 gi|313148055|ref|ZP_07810248.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136822|gb|EFR54182.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 139

 Score = 41.2 bits (95), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 8/109 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEI 110
           + I E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ E 
Sbjct: 33  KRIGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCQGDRLSGDLFISLET 85

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           ++  +      ++  L   IIHG LHL G +     +  +ME  E   L
Sbjct: 86  VKTNSEQFNTTYDEELHRTIIHGILHLCGINDKGPGEREIMEAAENRAL 134


>gi|193215488|ref|YP_001996687.1| hypothetical protein Ctha_1783 [Chloroherpeton thalassium ATCC
           35110]
 gi|238692691|sp|B3QTP2|RRMF_CHLT3 RecName: Full=Probable rRNA maturation factor
 gi|193088965|gb|ACF14240.1| protein of unknown function UPF0054 [Chloroherpeton thalassium ATCC
           35110]
          Length = 141

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S V+     I  +N E+   D PT+ +SF           + + G+  ++ + +   A
Sbjct: 35  EISAVYCGDRLIRKINIEHLAHDYPTDTISFRL------NSGNAIEGEFYISCDTVRRNA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYD 141
                 FEN L+ + IH  LHL+G++
Sbjct: 89  QEYESSFENELLRVTIHSVLHLIGFE 114


>gi|313157525|gb|EFR56943.1| translation metalloprotein YbeY [Alistipes sp. HGB5]
          Length = 143

 Score = 40.8 bits (94), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++S +F  + R+  +N +Y G D  T+V++F   ++   G + ++ GDI +  E +   A
Sbjct: 37  DVSYIFCSAQRLLEMNRQYLGHDYFTDVITFD--YSDRKG-ARVISGDIFIDVETVADNA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLG 139
            + G      +  +++HG LHL G
Sbjct: 94  RLYGFSTLQEMRRVVVHGVLHLCG 117


>gi|325299508|ref|YP_004259425.1| metalloprotease ybeY [Bacteroides salanitronis DSM 18170]
 gi|324319061|gb|ADY36952.1| metalloprotease ybeY [Bacteroides salanitronis DSM 18170]
          Length = 140

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 12/124 (9%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           + KAV+    K       + E++ +F    +I  +N +Y   D  T++++F      S+G
Sbjct: 22  WVKAVAQTYGK------KVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITFD----YSEG 71

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
             + + GD+ ++ + +   A      ++  L  +IIHG LHL G +     +  +ME  E
Sbjct: 72  --NRIAGDLFISLDTVRTNAEQFNAPYDTELHRVIIHGILHLCGINDKGPGEREIMEAAE 129

Query: 156 RSIL 159
              L
Sbjct: 130 NKAL 133


>gi|218258573|ref|ZP_03474916.1| hypothetical protein PRABACTJOHN_00571 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225343|gb|EEC97993.1| hypothetical protein PRABACTJOHN_00571 [Parabacteroides johnsonii
           DSM 18315]
          Length = 144

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 11/141 (7%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           A + ++I L      +  +AV N + +      + + ++S +F    +I  +N +Y   D
Sbjct: 4   AFYAEDIKL----PAIKKRAVGNWVKEVAATYGKKVGDISYIFCSDEKILEVNRQYLQHD 59

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
             T++++F   + S D  S    GD+ ++ + ++  +      +   L   IIHG LHL 
Sbjct: 60  YYTDIITFD--YTSGDKIS----GDLFISLDTVKTNSETFNTSYNEELHRTIIHGILHLC 113

Query: 139 GYDHVDDKDACVMEGLERSIL 159
           G +     +  +ME  E   L
Sbjct: 114 GINDKGPGEREIMEANENKAL 134


>gi|319900528|ref|YP_004160256.1| hypothetical protein Bache_0647 [Bacteroides helcogenes P 36-108]
 gi|319415559|gb|ADV42670.1| protein of unknown function UPF0054 [Bacteroides helcogenes P
           36-108]
          Length = 138

 Score = 40.8 bits (94), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 9/106 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIE 114
           E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + +   
Sbjct: 36  EIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGNRLSGDLFISLDTVRTN 88

Query: 115 A-NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A    G ++E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 89  AEQFAGNDYERELYRVIIHGILHLCGINDKGPGEREIMEEAENKAL 134


>gi|305665799|ref|YP_003862086.1| hypothetical protein FB2170_05900 [Maribacter sp. HTCC2170]
 gi|88710565|gb|EAR02797.1| hypothetical protein FB2170_05900 [Maribacter sp. HTCC2170]
          Length = 140

 Score = 40.8 bits (94), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++ +F +   +  +N ++   D  T++++F      +DG  +++ GD+ ++ E IE  A 
Sbjct: 36  INFIFCEDDYLLKVNQQHLKHDYFTDIITFDY----TDG--NIVSGDVFISTERIEENAG 89

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           + G  F   L+ ++ HG LHLLGY+   + +   M   E
Sbjct: 90  LFGVNFNTELLRVMSHGILHLLGYNDKSEDEVIKMRAKE 128


>gi|294054666|ref|YP_003548324.1| protein of unknown function UPF0054 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293613999|gb|ADE54154.1| protein of unknown function UPF0054 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 153

 Score = 40.4 bits (93), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           + G+F  ++  ELS+VF     I  ++ ++     PT+V++FP              G+I
Sbjct: 31  ASGHFPIQS-GELSIVFVGDPEIGQIHDDFMDDPSPTDVITFPA------DPEMDFAGEI 83

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           +++ +    ++  L       L   ++HG+LHL GYD +++ D   M   E+  L+
Sbjct: 84  IVSVDHAIRKSKELDLPLTRELSLYLVHGWLHLAGYDDLNEADRAEMRKAEQIALD 139


>gi|71654855|ref|XP_816039.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881140|gb|EAN94188.1| hypothetical protein, conserved [Trypanosoma cruzi]
 gi|322822620|gb|EFZ28616.1| hypothetical protein TCSYLVIO_5140 [Trypanosoma cruzi]
          Length = 207

 Score = 40.4 bits (93), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 36/145 (24%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLS------------------FPTA---FASS 93
           VELS+ F    +++ LN E RGID+PT+VL+                  FP        S
Sbjct: 39  VELSIHFIRLSQMQLLNHERRGIDRPTDVLTVSGSGSGSPDASWVNGVLFPDKSHIVCVS 98

Query: 94  DGCSS------------LMLGDIVLAYEIIEIEANVLGKE---FENHLVHLIIHGFLHLL 138
           DG  +            L LG+I ++ E + +       +   F ++L   + H  LH L
Sbjct: 99  DGLRASEWAAPSRRDLLLDLGEIYVSVEEMWMRCLRYPHKNLPFHDYLQVALTHALLHAL 158

Query: 139 GYDHVDDKDACVMEGLERSILEDLG 163
           GYDH   +    M   E+ +L  L 
Sbjct: 159 GYDHDTPERWKKMSRREKFMLHQLA 183


>gi|291514792|emb|CBK64002.1| conserved hypothetical protein TIGR00043 [Alistipes shahii WAL
           8301]
          Length = 145

 Score = 40.4 bits (93), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 3/84 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++ +F  + R+  +N +Y G D  T+V++F   ++   G + ++ GDI +  E +   A
Sbjct: 37  DVTYIFCSAQRLLEMNRQYLGHDYFTDVITFD--YSDRKG-ARIVSGDIFIDVETVADNA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLG 139
              G      +  +++HG LHL G
Sbjct: 94  RQYGATTLQEMRRVVVHGILHLCG 117


>gi|281341183|gb|EFB16767.1| hypothetical protein PANDA_007691 [Ailuropoda melanoleuca]
          Length = 137

 Score = 40.4 bits (93), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP             D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRMYREKNIPTDVLSFPFHENIKAGELPQPDFQDDYNLGDIFLGV 95

Query: 109 EIIEIEANVLGKE-FENHLVHLIIHGFLHLLGYDH 142
           E I  +    G E + + L     HG  HLLG+ H
Sbjct: 96  EYIFQQCR--GHEDYYDILTVTATHGLCHLLGFTH 128


>gi|88801787|ref|ZP_01117315.1| hypothetical protein PI23P_03972 [Polaribacter irgensii 23-P]
 gi|88782445|gb|EAR13622.1| hypothetical protein PI23P_03972 [Polaribacter irgensii 23-P]
          Length = 137

 Score = 40.4 bits (93), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL+ +F D   +  LN E+   D  T+++SF  +         L+ GDI ++ E +   A
Sbjct: 35  ELNYIFCDDAYLLKLNVEFLQHDTFTDIISFDNSIGK------LISGDIFISTERVAENA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
                 F+  L  ++IHG LH +G+     KD  + E  E +  E+  +
Sbjct: 89  TDYKVSFQEELQRVMIHGVLHCVGF-----KDKTMEEQEEMTRQENTAL 132


>gi|193212442|ref|YP_001998395.1| hypothetical protein Cpar_0779 [Chlorobaculum parvum NCIB 8327]
 gi|238692633|sp|B3QMP2|RRMF_CHLP8 RecName: Full=Probable rRNA maturation factor
 gi|193085919|gb|ACF11195.1| protein of unknown function UPF0054 [Chlorobaculum parvum NCIB
           8327]
          Length = 141

 Score = 40.4 bits (93), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           RT+ E + A+A+  +I +       +  +  ++  +  I  +N ++   D  T+ ++F  
Sbjct: 11  RTIDEALLAEAIQLVIGE---EGGKVGSIEAIYCGNKMIRRINRDFLNHDYATDTITF-- 65

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
               ++G    + G+  ++ ++IE  A   G  FE+ L+ + IH  LHL+GYD
Sbjct: 66  --GYNEGGE--VEGEFYISLDVIESNARRFGVMFEDELLRVTIHSALHLMGYD 114


>gi|89889741|ref|ZP_01201252.1| conserved hypothetical protein, UPF0054 family [Flavobacteria
           bacterium BBFL7]
 gi|89518014|gb|EAS20670.1| conserved hypothetical protein, UPF0054 family [Flavobacteria
           bacterium BBFL7]
          Length = 139

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 11/120 (9%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E+ F+K +  + S      ++I +LS VF     +  +N +Y   D  T++++F      
Sbjct: 15  EIYFSKWLDAIASSE---NKSIGDLSYVFCTDEFLLDINQQYLNHDTLTDIITF------ 65

Query: 93  SDGCS-SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
            D C   L+ G+I ++ + ++  A+     F   L+ ++ HG LHLLGY    D++  +M
Sbjct: 66  -DYCDDQLIHGEIYISIDRVKENASDFQVTFTEELLRVMAHGLLHLLGYGDKLDEEKVIM 124


>gi|228471545|ref|ZP_04056320.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228277121|gb|EEK15801.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 138

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++ +F +   +  +N +Y   D  T++++F        G  +L+  DI ++ E +   A
Sbjct: 36  DINYIFCNDEYLHKINVDYLQHDTLTDIITFDY------GKDNLLASDIYISIERVRENA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGY 140
              G +F   L+ ++ HG LHL GY
Sbjct: 90  QEFGVDFSTELLRVMSHGILHLCGY 114


>gi|163786964|ref|ZP_02181412.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|163789246|ref|ZP_02183688.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159875461|gb|EDP69523.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878824|gb|EDP72880.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 136

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 37  AKAVSNLISKGYFVKENIVE--LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           ++ +S  ISK    +EN  E  ++ +F     +  LN ++   D  T+++SF  +     
Sbjct: 15  SEQISKWISKT-ISEENCKEGEINYIFCSDEYLHRLNVDFLNHDTLTDIISFDYSVGKE- 72

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                + GD+ ++ + ++  A      FE+ +  +IIHG LH  GY    ++D  +M
Sbjct: 73  -----LHGDVYISVDRVKENAFEFKTAFEDEISRVIIHGVLHYCGYKDKSEEDEMLM 124


>gi|299139982|ref|ZP_07033152.1| protein of unknown function UPF0054 [Acidobacterium sp. MP5ACTX8]
 gi|298597982|gb|EFI54150.1| protein of unknown function UPF0054 [Acidobacterium sp. MP5ACTX8]
          Length = 192

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ ++ +D   +  LN E+RG DK T+VLSFP    +       + GD+ ++ +    +A
Sbjct: 43  EVEVLLSDDRTLRRLNREFRGKDKATDVLSFP----APPELEGQLAGDLAISLDTALKQA 98

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSIL 159
              G    + +  L++HG LHL G DH VD+ +    E + R+ L
Sbjct: 99  QEQGHTLRDEVRVLLLHGLLHLYGMDHEVDEGEMAAREAVLRTQL 143


>gi|196234338|ref|ZP_03133167.1| protein of unknown function UPF0054 [Chthoniobacter flavus
           Ellin428]
 gi|196221605|gb|EDY16146.1| protein of unknown function UPF0054 [Chthoniobacter flavus
           Ellin428]
          Length = 146

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 14/133 (10%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           LR L  +   + + +  + G F    + E+ +       IE ++  +      T+V++F 
Sbjct: 19  LRKLAPLALERCLEH-SADGRFALRQLEEVEVAIVTDRVIEDVHLRFLKTPGATDVITFE 77

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                         G+IV++ E     A     +    L   IIHG LHL GYD +   D
Sbjct: 78  -------------YGEIVISAETAAAYARQYKHDVNRELGLYIIHGLLHLNGYDDLTPGD 124

Query: 148 ACVMEGLERSILE 160
           A +M   ++ ILE
Sbjct: 125 AELMHRTQQDILE 137


>gi|162448297|ref|YP_001610664.1| hypothetical protein sce0028 [Sorangium cellulosum 'So ce 56']
 gi|161158879|emb|CAN90184.1| hypothetical protein sce0028 [Sorangium cellulosum 'So ce 56']
          Length = 201

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--------------- 99
           VELS+   +   I  LN  YR  DKPT+VL+FP      +G  S                
Sbjct: 57  VELSVALVNDEAIHELNRSYRRKDKPTDVLAFP--MLDQNGADSRRRGRRGPVDPSVWRG 114

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           +LGD++++ +    +A    +   + +  L+ HG LHLLGYDH  D +   M  L R +
Sbjct: 115 LLGDVIVSIDTAARQAAERDRPLLDEITMLLGHGLLHLLGYDHKTDAEEREMTDLTREL 173


>gi|212692566|ref|ZP_03300694.1| hypothetical protein BACDOR_02063 [Bacteroides dorei DSM 17855]
 gi|237709119|ref|ZP_04539600.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724398|ref|ZP_04554879.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265752644|ref|ZP_06088213.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212664851|gb|EEB25423.1| hypothetical protein BACDOR_02063 [Bacteroides dorei DSM 17855]
 gi|229437267|gb|EEO47344.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229456815|gb|EEO62536.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263235830|gb|EEZ21325.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 138

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-SSLMLGDIVLAYEI 110
           + + E++ +F    +I  +N +Y   D  T++++F       D C  + + GD+ ++ + 
Sbjct: 32  KRVGEIAYIFCSDDKILEVNQQYLQHDYYTDIITF-------DYCEGNRISGDLFISLDT 84

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   A    + ++  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 85  VRTNAEQFEQPYDRELHRVIIHGILHLCGINDKGPGEREIMEAAENKAL 133


>gi|258648907|ref|ZP_05736376.1| putative metalloprotease [Prevotella tannerae ATCC 51259]
 gi|260850939|gb|EEX70808.1| putative metalloprotease [Prevotella tannerae ATCC 51259]
          Length = 139

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++ +F D  +I  +N +Y   D  T++++F      ++G  +++ GD+ ++ + +   A
Sbjct: 36  EIAYIFCDDEKILEVNQQYLNHDYYTDIITFDY----TEG--NVLSGDLFISLDTVRTNA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
                 +   L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 90  EQRQISYREELDRVIIHGILHLCGINDKGPGERQLMEAAENKAL 133


>gi|224142850|ref|XP_002324751.1| predicted protein [Populus trichocarpa]
 gi|222866185|gb|EEF03316.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 2/110 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           +ELS++  +   I  LN E+R  D  T+VLS        D    LMLGDIV++ E    +
Sbjct: 154 IELSVMLCNDEFIRKLNKEWRDEDHATDVLSMSQHVPGLD-LPILMLGDIVISVETAARQ 212

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLG 163
           A   G    +    L++HG LHL G+DH + ++    M+  E  +LE LG
Sbjct: 213 AEERGHTLIDETRVLLVHGLLHLFGFDHEISEEAEAEMDKEEGVLLESLG 262


>gi|21674205|ref|NP_662270.1| hypothetical protein CT1383 [Chlorobium tepidum TLS]
 gi|62901450|sp|Q8KCN1|RRMF_CHLTE RecName: Full=Probable rRNA maturation factor
 gi|21647369|gb|AAM72612.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 137

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           RT+ E + A+ +  +I +       +  +  ++  +  I  +N ++ G D  T+ ++F  
Sbjct: 11  RTIDETLLAEVIRLVIGE---EGGAVGSIEAIYCGNKMIRRINRDFLGHDYVTDTITF-- 65

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
               ++G    + G+  ++ ++IE  A   G  FE+ L+ + IH  LHL+GYD
Sbjct: 66  --GYNEGGE--VDGEFYISLDVIESNARRFGVSFEDELLRVTIHSALHLMGYD 114


>gi|154494262|ref|ZP_02033582.1| hypothetical protein PARMER_03613 [Parabacteroides merdae ATCC
           43184]
 gi|154085946|gb|EDN84991.1| hypothetical protein PARMER_03613 [Parabacteroides merdae ATCC
           43184]
          Length = 148

 Score = 39.7 bits (91), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 7/131 (5%)

Query: 30  TLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           T    +  +AV N + +      + + ++S +F    +I  +N +Y   D  T++++F  
Sbjct: 10  TKLPAIKKRAVGNWVKEVAATYGKKVGDISYIFCSDEKILEVNRQYLQHDYYTDIITFD- 68

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            + S D  S    GD+ ++ + ++  +      +   L   IIHG LHL G +     + 
Sbjct: 69  -YTSGDKIS----GDLFISLDTVKTNSEAFNTPYNEELHRTIIHGILHLCGINDKGPGER 123

Query: 149 CVMEGLERSIL 159
            +ME  E   L
Sbjct: 124 ELMEANENKAL 134


>gi|124010286|ref|ZP_01694939.1| conserved hypothetical protein, putative [Microscilla marina ATCC
           23134]
 gi|123983671|gb|EAY24111.1| conserved hypothetical protein, putative [Microscilla marina ATCC
           23134]
          Length = 157

 Score = 39.7 bits (91), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L+ +F +   +  +N EY   D  T++++F  +         L+ GDI ++ + I   A 
Sbjct: 53  LNYIFCNDAYLHQINVEYLDHDTYTDIITFDNS-----EEEQLIEGDIFISIDRIRENAA 107

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
                F   L  ++ HG LHLLG+    D +  +M   E   L
Sbjct: 108 TYNASFAVELHRVMAHGLLHLLGFGDKTDDEKLIMRTQEDKAL 150


>gi|254880983|ref|ZP_05253693.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319639991|ref|ZP_07994718.1| metalloprotease [Bacteroides sp. 3_1_40A]
 gi|254833776|gb|EET14085.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317388269|gb|EFV69121.1| metalloprotease [Bacteroides sp. 3_1_40A]
          Length = 138

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E++ +F    +I  +N +Y   D  T++++F   +   D  S    GD+ ++ + +
Sbjct: 32  KRVGEIAYIFCSDDKILEVNRQYLQHDYYTDIITFD--YCEGDRIS----GDLFISLDTV 85

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              A    + ++  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 86  RSNAEQFEQPYDRELHRVIIHGILHLCGINDKGPGEREIMEAAENKAL 133


>gi|320170652|gb|EFW47551.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 204

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 26/138 (18%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--------------PT----- 88
           +FV E  ++  +    SH + +     R   +PT++L+F              P      
Sbjct: 42  HFVGETRMKALVAQAQSHELASAQPPPRSA-RPTDILAFGNPMDVAADGLHKHPASSLEE 100

Query: 89  ------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                 A+ S+ G     +G++ L   +IE +       FE  L  L+ HG  HLLG+DH
Sbjct: 101 MKKCNLAWKSAYGDPVRDIGELFLCPAVIERDCLKDQVTFEGRLPVLLAHGLCHLLGHDH 160

Query: 143 VDDKDACVMEGLERSILE 160
              + +  M  LE+ +L+
Sbjct: 161 DTMRTSAQMFQLEQQLLQ 178


>gi|150003785|ref|YP_001298529.1| hypothetical protein BVU_1217 [Bacteroides vulgatus ATCC 8482]
 gi|294777391|ref|ZP_06742842.1| metalloprotein, YbeY family [Bacteroides vulgatus PC510]
 gi|172048643|sp|A6KZP3|RRMF_BACV8 RecName: Full=Probable rRNA maturation factor
 gi|149932209|gb|ABR38907.1| conserved hypothetical protein with conserved domain [Bacteroides
           vulgatus ATCC 8482]
 gi|294448459|gb|EFG17008.1| metalloprotein, YbeY family [Bacteroides vulgatus PC510]
          Length = 138

 Score = 39.3 bits (90), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E++ +F    +I  +N +Y   D  T++++F   +   D  S    GD+ ++ + +
Sbjct: 32  KRVGEIAYIFCSDDKILEVNRQYLQHDYYTDIITFD--YCEGDRIS----GDLFISLDTV 85

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              A    + ++  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 86  RSNAEQFEQPYDRELHRVIIHGILHLCGINDKGPGEREIMEAAENKAL 133


>gi|289425171|ref|ZP_06426948.1| metalloprotein, YbeY family [Propionibacterium acnes SK187]
 gi|289427200|ref|ZP_06428916.1| metalloprotein, YbeY family [Propionibacterium acnes J165]
 gi|295130497|ref|YP_003581160.1| metalloprotein, YbeY family [Propionibacterium acnes SK137]
 gi|289154149|gb|EFD02837.1| metalloprotein, YbeY family [Propionibacterium acnes SK187]
 gi|289159669|gb|EFD07857.1| metalloprotein, YbeY family [Propionibacterium acnes J165]
 gi|291376558|gb|ADE00413.1| metalloprotein, YbeY family [Propionibacterium acnes SK137]
 gi|313764557|gb|EFS35921.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL013PA1]
 gi|313772405|gb|EFS38371.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL074PA1]
 gi|313801806|gb|EFS43040.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL110PA2]
 gi|313807415|gb|EFS45902.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL087PA2]
 gi|313809923|gb|EFS47644.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL083PA1]
 gi|313816098|gb|EFS53812.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL059PA1]
 gi|313818461|gb|EFS56175.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL046PA2]
 gi|313820224|gb|EFS57938.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL036PA1]
 gi|313822967|gb|EFS60681.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL036PA2]
 gi|313825105|gb|EFS62819.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL063PA1]
 gi|313827673|gb|EFS65387.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL063PA2]
 gi|313830254|gb|EFS67968.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL007PA1]
 gi|313834055|gb|EFS71769.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL056PA1]
 gi|313838632|gb|EFS76346.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL086PA1]
 gi|314915553|gb|EFS79384.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL005PA4]
 gi|314918493|gb|EFS82324.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL050PA1]
 gi|314919980|gb|EFS83811.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL050PA3]
 gi|314925452|gb|EFS89283.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL036PA3]
 gi|314931993|gb|EFS95824.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL067PA1]
 gi|314955862|gb|EFT00262.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL027PA1]
 gi|314958343|gb|EFT02446.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL002PA1]
 gi|314960102|gb|EFT04204.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL002PA2]
 gi|314962904|gb|EFT07004.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL082PA1]
 gi|314968019|gb|EFT12118.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL037PA1]
 gi|314973260|gb|EFT17356.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL053PA1]
 gi|314975935|gb|EFT20030.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL045PA1]
 gi|314978308|gb|EFT22402.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL072PA2]
 gi|314984047|gb|EFT28139.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL005PA1]
 gi|314987810|gb|EFT31901.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL005PA2]
 gi|314990031|gb|EFT34122.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL005PA3]
 gi|315080748|gb|EFT52724.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL078PA1]
 gi|315084418|gb|EFT56394.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL027PA2]
 gi|315085758|gb|EFT57734.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL002PA3]
 gi|315088824|gb|EFT60800.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL072PA1]
 gi|315096172|gb|EFT68148.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL038PA1]
 gi|315098434|gb|EFT70410.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL059PA2]
 gi|315101209|gb|EFT73185.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL046PA1]
 gi|315108431|gb|EFT80407.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL030PA2]
 gi|327326089|gb|EGE67879.1| putative metalloprotease [Propionibacterium acnes HL096PA2]
 gi|327332040|gb|EGE73777.1| putative metalloprotease [Propionibacterium acnes HL096PA3]
 gi|327443243|gb|EGE89897.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL013PA2]
 gi|327446029|gb|EGE92683.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL043PA2]
 gi|327447993|gb|EGE94647.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL043PA1]
 gi|327450883|gb|EGE97537.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL087PA3]
 gi|327453768|gb|EGF00423.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL083PA2]
 gi|328753570|gb|EGF67186.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL020PA1]
 gi|328754303|gb|EGF67919.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL087PA1]
 gi|328754445|gb|EGF68061.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL025PA2]
 gi|328760410|gb|EGF73978.1| putative metalloprotease [Propionibacterium acnes HL099PA1]
 gi|332675333|gb|AEE72149.1| putative metal-dependent hydrolase [Propionibacterium acnes 266]
          Length = 155

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEII 111
           ELS++  D   +E  + ++ G+  PT+VLSFP     A    +   S +LGDIVL   + 
Sbjct: 35  ELSIILVDEETMEAYHEKFMGLPGPTDVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVT 94

Query: 112 EIEANVLGK 120
             +A   G+
Sbjct: 95  ARQAAENGR 103


>gi|213581737|ref|ZP_03363563.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 39

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +LGYDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 1   MLGYDHIDDDEAEEMESLETEIMLAMGYEDPY 32


>gi|157876147|ref|XP_001686434.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68129508|emb|CAJ08051.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 213

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 30/51 (58%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIV 105
             L+L F     +  LN++Y+G+D+PT+VL+F  A  +    + L+ GD +
Sbjct: 37  TRLNLEFVSLAHMRQLNYKYKGLDRPTDVLTFAPAGEADSFVNDLLFGDFL 87


>gi|110598628|ref|ZP_01386894.1| Protein of unknown function UPF0054 [Chlorobium ferrooxidans DSM
           13031]
 gi|110339740|gb|EAT58249.1| Protein of unknown function UPF0054 [Chlorobium ferrooxidans DSM
           13031]
          Length = 149

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R + E + + AV  ++    F  +++V    V+  +  I+ +N E+ G D PT+ ++F  
Sbjct: 22  REVPEQLLSDAVLLVLETEEFTVDSVVG---VYCGNKMIQRINREFLGHDYPTDTVTFRY 78

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +          + G+  ++ +++   A     +F   L+ + IH  LHL+GYD    ++ 
Sbjct: 79  SKDRE------VDGEFYISLDVVRENAARFDADFLQELLRVTIHSALHLIGYDDQSPEER 132

Query: 149 CVMEGLERSILEDLGIN 165
             M+  E   L  L  N
Sbjct: 133 AGMQEKEAFYLARLAQN 149


>gi|50842421|ref|YP_055648.1| putative metalloprotease [Propionibacterium acnes KPA171202]
 gi|282854119|ref|ZP_06263456.1| metalloprotein, YbeY/ UPF0054family [Propionibacterium acnes J139]
 gi|59799026|sp|Q6A976|RRMF_PROAC RecName: Full=Probable rRNA maturation factor
 gi|50840023|gb|AAT82690.1| conserved protein [Propionibacterium acnes KPA171202]
 gi|282583572|gb|EFB88952.1| metalloprotein, YbeY/ UPF0054family [Propionibacterium acnes J139]
 gi|314923094|gb|EFS86925.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL001PA1]
 gi|314966863|gb|EFT10962.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL082PA2]
 gi|314981205|gb|EFT25299.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL110PA3]
 gi|315091776|gb|EFT63752.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL110PA4]
 gi|315093216|gb|EFT65192.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL060PA1]
 gi|315103280|gb|EFT75256.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL050PA2]
 gi|315105485|gb|EFT77461.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL030PA1]
          Length = 155

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEII 111
           ELS++  D   +E  + ++ G+  PT+VLSFP     A    +   S +LGDIVL   + 
Sbjct: 35  ELSIILVDEETMEAYHEKFMGLPGPTDVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVT 94

Query: 112 EIEANVLGK 120
             +A   G+
Sbjct: 95  ARQAAENGR 103


>gi|189501732|ref|YP_001957449.1| hypothetical protein Aasi_0282 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|238692302|sp|B3ER68|RRMF_AMOA5 RecName: Full=Probable rRNA maturation factor
 gi|189497173|gb|ACE05720.1| hypothetical protein Aasi_0282 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 147

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           +V L+ +F   + +   N +Y   D  T+V++F  A    +     + G+I ++ E +  
Sbjct: 38  LVNLNFIFCSDNFLHKKNLKYLQHDTLTDVITFSYAEDQKN-----IEGEIYISIERVSD 92

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYD 141
            A     +F   L  ++IHG LHLLGY+
Sbjct: 93  NATTYQIDFWQELYTVMIHGVLHLLGYN 120


>gi|326488921|dbj|BAJ98072.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 590

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S++  + + I+ LN E+RG D  T++LS  + F       +LMLGDIV++ E    +
Sbjct: 168 VEVSVLVCNDNFIQNLNKEWRGEDCATDMLSV-SQFIPDLDVPTLMLGDIVISVETAARQ 226

Query: 115 ANVLG 119
           A   G
Sbjct: 227 AEARG 231


>gi|328480085|gb|EGF49072.1| metalloprotease [Lactobacillus rhamnosus MTCC 5462]
          Length = 35

 Score = 38.9 bits (89), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/33 (51%), Positives = 22/33 (66%)

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HGFLHL GYDH+  +D  VM  L++ IL   G+
Sbjct: 1   HGFLHLNGYDHIKPEDEAVMIPLQKKILTAYGL 33


>gi|327327688|gb|EGE69464.1| putative metalloprotease [Propionibacterium acnes HL103PA1]
          Length = 155

 Score = 38.9 bits (89), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEII 111
           ELS++  D   +E  + ++ G+  PT+VLSFP     A    +   S +LGDIVL   + 
Sbjct: 35  ELSIILVDEETMEAYHEKFMGLPGPTDVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVT 94

Query: 112 EIEANVLGK 120
             +A   G+
Sbjct: 95  ARQAAENGR 103


>gi|225156450|ref|ZP_03724786.1| protein of unknown function UPF0054 [Opitutaceae bacterium TAV2]
 gi|224802958|gb|EEG21204.1| protein of unknown function UPF0054 [Opitutaceae bacterium TAV2]
          Length = 179

 Score = 38.9 bits (89), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 6/104 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELSL F     +  L+ ++  +D PT        F ++ G  S   G+I ++ +     A
Sbjct: 50  ELSLAFLSDAALARLHADF--LDDPTTTDVI--TFEATPGMGSA--GEICVSVDTAARYA 103

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              G +F   L   I+HG+LHL GYD +       M   E+  +
Sbjct: 104 REHGHDFAEELALYIVHGWLHLAGYDDLQPMKKRRMRAAEKRAI 147


>gi|332828365|gb|EGK01074.1| metalloprotease [Dysgonomonas gadei ATCC BAA-286]
          Length = 139

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K+ + ++S +F    +I  +N +Y   D  T++++F      +      + GDI ++ + 
Sbjct: 32  KKRVGDISFIFCSDKKILEINNQYLQHDYYTDIITFDYTEGET------ISGDIFISLDT 85

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           ++  A      +   +  +IIHG LHL G +     +   M G E   L+ L
Sbjct: 86  VKSNAEKFETNYNEEIHRIIIHGILHLCGINDKGPGEREFMTGCENKALKML 137


>gi|302342384|ref|YP_003806913.1| hypothetical protein Deba_0949 [Desulfarculus baarsii DSM 2075]
 gi|301638997|gb|ADK84319.1| protein of unknown function UPF0054 [Desulfarculus baarsii DSM
           2075]
          Length = 140

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
           SL+  D   I  +N +Y     PTNVL+F        G +  +LGD+V++ +  + EA  
Sbjct: 21  SLLICDDVEIAQINGQYLDRRGPTNVLAFAMQEGDGAGVNPQILGDVVVSIDTAQREAAE 80

Query: 118 LGKEFENHLVH 128
            G + + H V 
Sbjct: 81  NGLDPDEHFVR 91


>gi|320106115|ref|YP_004181705.1| hypothetical protein AciPR4_0878 [Terriglobus saanensis SP1PR4]
 gi|319924636|gb|ADV81711.1| protein of unknown function UPF0054 [Terriglobus saanensis SP1PR4]
          Length = 156

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++++  D  R++ LN  +R  +K T+VLSFP    S +     + GD+ ++ +  E +A
Sbjct: 35  DVTVLLADDARVKDLNRTFRKKNKATDVLSFPAGEGSDE-----IAGDLAISLDTAEKQA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE-RSILE 160
              G    + +  L +HG LHL G DH  DK     + LE R+ LE
Sbjct: 90  ESFGHTLYDEVRVLTLHGLLHLAGLDHEIDKGEMAAKELELRTKLE 135


>gi|327538122|gb|EGF24808.1| protein belonging to uncharacterized protein family UPF0054
           [Rhodopirellula baltica WH47]
          Length = 193

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 13/114 (11%)

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE-----ANV 117
           D   I  +N E+   D PT+V+SFP           ++ G++V ++E   IE     +N 
Sbjct: 60  DDATIHPINREFLQHDYPTDVISFPYELEPP-----MVEGELVASFETA-IENASEPSNP 113

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           L    E  L+  ++HG LH++G+D    +    M   E + ++ +GI  P   D
Sbjct: 114 LSPREE--LLLYVVHGTLHIVGHDDQSPEPRAAMRRAEIAAMKLIGIELPLSND 165


>gi|313837274|gb|EFS74988.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL037PA2]
 gi|314928051|gb|EFS91882.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL044PA1]
 gi|314972045|gb|EFT16143.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL037PA3]
 gi|328907175|gb|EGG26941.1| metalloprotein, YbeY family [Propionibacterium sp. P08]
          Length = 155

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEII 111
           ELS++  D   +E  + ++ G+  PT+VLSFP     A    +   S +LGDIVL   + 
Sbjct: 35  ELSIILIDEQTMEAYHEKFMGLPGPTDVLSFPMDEMRAPVDREDPPSGLLGDIVLCPTVT 94

Query: 112 EIEANVLGK 120
             +A   G+
Sbjct: 95  ARQAAENGR 103


>gi|255529923|ref|YP_003090295.1| hypothetical protein Phep_0007 [Pedobacter heparinus DSM 2366]
 gi|255342907|gb|ACU02233.1| protein of unknown function UPF0054 [Pedobacter heparinus DSM 2366]
          Length = 142

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM 100
           S +  +GY ++E    L+ +      +  +N +Y   D  T+V++F  A          +
Sbjct: 29  SAIAEEGYVLRE----LNFILCSDEYLLRINQDYLQHDTYTDVITFDNAEELK-----TI 79

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           +GDI ++ E ++  A  L       L  ++IHG LHLLGY
Sbjct: 80  VGDIFISIERVQENARALKLPVAEELCRVMIHGTLHLLGY 119


>gi|312129899|ref|YP_003997239.1| hypothetical protein Lbys_1166 [Leadbetterella byssophila DSM
           17132]
 gi|311906445|gb|ADQ16886.1| protein of unknown function UPF0054 [Leadbetterella byssophila DSM
           17132]
          Length = 152

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + EL+ +F     +  +N +Y      T++++F  +         ++ GDI ++ + +
Sbjct: 42  KKVGELNYIFLSDEDLLEINIQYLDHHTYTDIITFDNSEEEK-----MIEGDIFISVDRV 96

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME-GLERSI 158
              A      FE  L+ ++ HG LHLLG     ++D+ +M  G E++I
Sbjct: 97  RENAQTFKVSFEQELLRVMAHGVLHLLGLKDKTEEDSKLMRAGEEKAI 144


>gi|32473188|ref|NP_866182.1| hypothetical protein RB4579 [Rhodopirellula baltica SH 1]
 gi|46577385|sp|Q7USC9|RRMF_RHOBA RecName: Full=Probable rRNA maturation factor
 gi|32397867|emb|CAD73868.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 194

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 13/114 (11%)

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE-----ANV 117
           D   I  +N E+   D PT+V+SFP           ++ G++V ++E   IE     +N 
Sbjct: 61  DDATIHPINREFLQHDYPTDVISFPYELEPP-----MVEGELVASFETA-IENASEPSNP 114

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           L    E  L+  ++HG LH++G+D    +    M   E + ++ +GI  P   D
Sbjct: 115 LSPREE--LLLYVVHGTLHIVGHDDQSPEPRAAMRRAEIAAMKLIGIELPLSND 166


>gi|84999364|ref|XP_954403.1| hypothetical protein [Theileria annulata]
 gi|65305401|emb|CAI73726.1| hypothetical protein, conserved [Theileria annulata]
          Length = 524

 Score = 38.1 bits (87), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 20/126 (15%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLS-----------FPTAFASSDGCSSLMLGDIV 105
           L +   D   ++ +NFE  G +KPT+++S           F    +         LG+I 
Sbjct: 386 LDIFIEDEKNMKRINFEQFGGNKPTDIISLRDDLLYLKSDFHKNRSPLKPPEHYHLGEIF 445

Query: 106 LAYEIIEIEANVLG---------KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +   +IE E  + G          +    +  ++ HG LHLLGYDH   +    M  +E 
Sbjct: 446 ICPGVIESENMIRGGVAARMKGISDINIRMCFIMAHGILHLLGYDHEKAEWFREMAEMED 505

Query: 157 SILEDL 162
           ++L++ 
Sbjct: 506 ALLDEF 511


>gi|255037549|ref|YP_003088170.1| hypothetical protein Dfer_3801 [Dyadobacter fermentans DSM 18053]
 gi|254950305|gb|ACT95005.1| protein of unknown function UPF0054 [Dyadobacter fermentans DSM
           18053]
          Length = 146

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 11/122 (9%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           K  SN  S+GY     + +L+ +F     +  +N +Y   D  T++++F  +   +    
Sbjct: 33  KNASN--SEGY----EVSQLNYIFCSDEYLLEINKQYLDHDYFTDIITFDNSEEDNQ--- 83

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             + GDI ++ + +   A     +F+  +  ++IHG LHL G+D   +     M   E  
Sbjct: 84  --LEGDIYVSVDRVRENAATFHTDFDTEMRRVLIHGLLHLAGHDDTSEALKTAMRAKEDE 141

Query: 158 IL 159
            L
Sbjct: 142 YL 143


>gi|196001605|ref|XP_002110670.1| hypothetical protein TRIADDRAFT_54920 [Trichoplax adhaerens]
 gi|190586621|gb|EDV26674.1| hypothetical protein TRIADDRAFT_54920 [Trichoplax adhaerens]
          Length = 174

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 13/97 (13%)

Query: 81  TNVLSFP--TAFASSDGCSSLM-----LGDIVLAYEII--EIEANVLGKEFENHLVHLII 131
           T++LSFP      +S    S++     LGDI +  ++I    + ++L ++   +    + 
Sbjct: 71  TDILSFPFHENLRASLSSKSILPWECDLGDIFICPKMICQRFDKSILQEQLPVY----VT 126

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HG  HLLGY H D+K    M   ER ILE     + Y
Sbjct: 127 HGICHLLGYIHDDEKSQIEMHIKERDILEKFNRANGY 163


>gi|160888660|ref|ZP_02069663.1| hypothetical protein BACUNI_01077 [Bacteroides uniformis ATCC 8492]
 gi|270295007|ref|ZP_06201208.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478000|ref|ZP_07937182.1| hypothetical protein HMPREF1007_00298 [Bacteroides sp. 4_1_36]
 gi|156861974|gb|EDO55405.1| hypothetical protein BACUNI_01077 [Bacteroides uniformis ATCC 8492]
 gi|270274254|gb|EFA20115.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905789|gb|EFV27561.1| hypothetical protein HMPREF1007_00298 [Bacteroides sp. 4_1_36]
          Length = 137

 Score = 38.1 bits (87), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEI 110
           + + E++ +F    +I  +N +Y   D  T++++F       D C    L GD+ ++ + 
Sbjct: 32  KRVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF-------DYCEGNRLSGDLFISLDT 84

Query: 111 IEIEANVLG-KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +   A       +E  L  +IIHG LHL G +     +  +ME  E   L
Sbjct: 85  VRTNAEQFADNNYERELYRVIIHGILHLCGINDKGPGEREIMEEAENKAL 134


>gi|319953028|ref|YP_004164295.1| metalloprotease ybey [Cellulophaga algicola DSM 14237]
 gi|319421688|gb|ADV48797.1| metalloprotease ybeY [Cellulophaga algicola DSM 14237]
          Length = 139

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS-LMLGDIVLAYEIIEIEA 115
           LS +F D   +  +N +Y   D  T++++F       D C    + GD+ ++ E +   A
Sbjct: 36  LSYIFCDDAYLLDINMKYLDHDTYTDIVTF-------DYCEGDTIAGDLFISIERVLENA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
                +F   L  ++ HG LHL GY    D DA +M   E 
Sbjct: 89  KEYNVDFLEELHRVMSHGVLHLAGYKDKTDMDAALMRKKEE 129


>gi|194336788|ref|YP_002018582.1| protein of unknown function UPF0054 [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309265|gb|ACF43965.1| protein of unknown function UPF0054 [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 139

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 9/112 (8%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + + E +  KAV  ++    F  E+IV    V+  +  I+ +N E+ G D PT+ ++F  
Sbjct: 10  KEIPEQLLEKAVLLVLENEGFTVESIVG---VYCGNKMIQRINREFLGHDYPTDTITFRY 66

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
              +       + G+  ++ ++++  A     +F+  L+ + +H  LHL+GY
Sbjct: 67  NKGAE------IDGEFYISLDVVKENAARFSVDFQQELLRVTLHSALHLIGY 112


>gi|326798706|ref|YP_004316525.1| metalloprotease ybeY [Sphingobacterium sp. 21]
 gi|326549470|gb|ADZ77855.1| metalloprotease ybeY [Sphingobacterium sp. 21]
          Length = 144

 Score = 38.1 bits (87), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S +F     +  +N EY   D  T++++F     S D   +++ GDI ++ + I+  A
Sbjct: 40  EISFIFCSDEYLHKINVEYLNHDTYTDIITFDN---SED--ENVIAGDIFISIDRIKENA 94

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGY 140
                +  + L  +IIHG LHL GY
Sbjct: 95  KSFLVKEVDELHRVIIHGILHLCGY 119


>gi|167753840|ref|ZP_02425967.1| hypothetical protein ALIPUT_02125 [Alistipes putredinis DSM 17216]
 gi|167658465|gb|EDS02595.1| hypothetical protein ALIPUT_02125 [Alistipes putredinis DSM 17216]
          Length = 148

 Score = 37.7 bits (86), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 3/84 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++ +F  + R+  +N ++ G D  T+V++F   ++   G + ++ GDI +  E +   A
Sbjct: 37  DVTYIFCSAARLLDMNRQFLGHDYYTDVITFD--YSDRKG-ARIVSGDIFIDVETVADNA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLG 139
              G      +  +++HG LHL G
Sbjct: 94  REYGAAKLTEMRRVVVHGLLHLCG 117


>gi|167737212|ref|ZP_02409986.1| hypothetical protein Bpse14_04051 [Burkholderia pseudomallei 14]
          Length = 39

 Score = 37.7 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 132 HGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPY 168
           HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 1   HGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 38


>gi|307069660|ref|YP_003878137.1| hypothetical protein ZICARI_187 [Candidatus Zinderia insecticola
           CARI]
 gi|306482920|gb|ADM89791.1| hypothetical protein ZICARI_187 [Candidatus Zinderia insecticola
           CARI]
          Length = 139

 Score = 37.7 bits (86), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           +I+ +NF ++     TN+L+F   +        ++  +I +  +I++ E      + +N+
Sbjct: 43  KIKKINFTFKKKKNVTNILTFKNIYN-----KIIIDSNIYICLKILKKECKNKNIKLKNY 97

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
             ++I+HG LH   + H + K+   M+  E
Sbjct: 98  FFYIIMHGILHSYNFKHNNFKNYKEMKKKE 127


>gi|313676469|ref|YP_004054465.1| hypothetical protein Ftrac_2379 [Marivirga tractuosa DSM 4126]
 gi|312943167|gb|ADR22357.1| protein of unknown function UPF0054 [Marivirga tractuosa DSM 4126]
          Length = 142

 Score = 37.7 bits (86), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           I EL+ +F     +  +N ++   D  T++++F      S   ++ +  DI ++ + +  
Sbjct: 36  IDELNYIFCSDKFLHKINVDFLDHDTYTDIITFD--LKESTTGNNAIESDIFISIDRVTE 93

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            A  L   F+  L  ++ HG LHL+G++   + D   M   E   +E
Sbjct: 94  NAENLNLNFKEELARVMAHGLLHLIGFNDKSEADRQEMREAENKAIE 140


>gi|224005883|ref|XP_002291902.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972421|gb|EED90753.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 272

 Score = 37.7 bits (86), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 15/68 (22%)

Query: 108 YEIIEIEAN-------------VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
           YE IE+E +             V   E   H+  LI+HG LHL+GYDH++D D  +M   
Sbjct: 186 YEYIEVEVDEYDDRGVAPAMLKVYNPEIRLHM--LIVHGMLHLVGYDHIEDDDYELMVVR 243

Query: 155 ERSILEDL 162
           E  ++ +L
Sbjct: 244 EDEVMAEL 251


>gi|212550624|ref|YP_002308941.1| hypothetical protein CFPG_267 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229554235|sp|B6YQQ8|RRMF_AZOPC RecName: Full=Probable rRNA maturation factor
 gi|212548862|dbj|BAG83530.1| conserved hypothetical protein [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 139

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++ +F  +  I  +N  Y   D  T++++F   ++  D    ++ GD+ +A ++I+  +
Sbjct: 37  DITCIFCSNDEILRINNFYLNHDCYTDIITFD--YSKGD----IISGDLFIALDMIKYNS 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
                 +   L  +IIHG LHL G++    KD  VM   E   LE +
Sbjct: 91  MKYNVNYFEELYRVIIHGILHLCGFNDKLIKDIKVMREGENRALEKI 137


>gi|313206593|ref|YP_004045770.1| hypothetical protein Riean_1103 [Riemerella anatipestifer DSM
           15868]
 gi|312445909|gb|ADQ82264.1| protein of unknown function UPF0054 [Riemerella anatipestifer DSM
           15868]
 gi|315022088|gb|EFT35117.1| predicted metal-dependent hydrolase [Riemerella anatipestifer
           RA-YM]
 gi|325335965|gb|ADZ12239.1| uncharacterized protein family UPF0054 [Riemerella anatipestifer
           RA-GD]
          Length = 137

 Score = 37.4 bits (85), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++ +F D   +  +N ++   D  T++++F     ++      + GDI ++   I   A
Sbjct: 35  KINYIFCDDEYLLKINQDHLQHDYYTDIITFDYVRGNT------ISGDIFVSLPRISDNA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           + L K++++  + ++ HG LHL GY    ++D   M   E
Sbjct: 89  STLSKDYQSEFLRVLAHGVLHLCGYKDKTEEDIKEMRNKE 128


>gi|74001574|ref|XP_855646.1| PREDICTED: similar to UPF0054 protein C21orf57 isoform 2 [Canis
          familiaris]
          Length = 73

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 23/32 (71%)

Query: 56 ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
          +L L+  D+  ++ LN  YRG D+PT+VLSFP
Sbjct: 36 DLGLLCVDNEGMQRLNRAYRGDDRPTDVLSFP 67


>gi|284040393|ref|YP_003390323.1| hypothetical protein Slin_5558 [Spirosoma linguale DSM 74]
 gi|283819686|gb|ADB41524.1| protein of unknown function UPF0054 [Spirosoma linguale DSM 74]
          Length = 137

 Score = 37.4 bits (85), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 9/107 (8%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           ++GY    ++ +L+ +F     +  +N +Y   D  T++++F    +  +G    + GD+
Sbjct: 29  AEGY----SVGDLNYMFCSDEYLLQVNRDYLQHDYYTDIITFD--MSEEEG---KIEGDV 79

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
            ++ E +   AN L    E  +  ++ HG LHL GY    D++A +M
Sbjct: 80  FVSVERVIDNANKLAVPAEQEMRRVLAHGLLHLCGYGDKTDEEAALM 126


>gi|221505230|gb|EEE30884.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 772

 Score = 37.0 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           L IH  LHLLG+DH ++ DA  ME +E ++ 
Sbjct: 413 LFIHAVLHLLGFDHEEEGDAREMEAVEEALF 443


>gi|300774540|ref|ZP_07084403.1| possible metal dependent hydrolase [Chryseobacterium gleum ATCC
           35910]
 gi|300506355|gb|EFK37490.1| possible metal dependent hydrolase [Chryseobacterium gleum ATCC
           35910]
          Length = 139

 Score = 37.0 bits (84), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 54/106 (50%), Gaps = 11/106 (10%)

Query: 36  FAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           + K + +LI S+G    + + E++ +F D   +  +N +Y   D  T++++F      + 
Sbjct: 17  YKKWLEDLILSEG----KKLGEINYIFCDDEYLLKINQDYLQHDYYTDIITFDYVKGKT- 71

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
                +  +I ++ + I   A+ L +++E  L  ++ HG LHL GY
Sbjct: 72  -----ISAEIFVSLQRISDNASTLSRDYEEELRRVLAHGILHLAGY 112


>gi|221483947|gb|EEE22251.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 776

 Score = 37.0 bits (84), Expect = 0.91,   Method: Composition-based stats.
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           L IH  LHLLG+DH ++ DA  ME +E ++ 
Sbjct: 413 LFIHAVLHLLGFDHEEEGDAREMEAVEAAVF 443


>gi|313792245|gb|EFS40346.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL110PA1]
 gi|315078119|gb|EFT50170.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL053PA2]
 gi|327453040|gb|EGE99694.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL092PA1]
          Length = 155

 Score = 37.0 bits (84), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP----TAFASSDGCSSLMLGDIVLAYEII 111
           ELS++  D   +E  + ++ G+  PT+VLSFP          +   S +LGDIVL   + 
Sbjct: 35  ELSIILVDEETMEAYHEKFMGLPGPTDVLSFPMDEMRVPGDDEDPPSGLLGDIVLCPTVT 94

Query: 112 EIEANVLGK 120
             +A   G+
Sbjct: 95  ARQAAENGR 103


>gi|281204298|gb|EFA78494.1| transmembrane protein [Polysphondylium pallidum PN500]
          Length = 1924

 Score = 37.0 bits (84), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 12/61 (19%)

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANV---LGKEFENHLVHLIIHGFLHLLGYDH 142
           FP  F  SDG +S  + D V      E++ NV   L +EFEN     +   FLH LG DH
Sbjct: 358 FPNHFKRSDGTTSFYVADTV------EVDNNVTRHLDEEFENDDWDAM---FLHYLGLDH 408

Query: 143 V 143
           +
Sbjct: 409 I 409


>gi|333029485|ref|ZP_08457546.1| metalloprotease ybeY [Bacteroides coprosuis DSM 18011]
 gi|332740082|gb|EGJ70564.1| metalloprotease ybeY [Bacteroides coprosuis DSM 18011]
          Length = 159

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 11/110 (10%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-SLMLGDIVLAYEIIEIE 114
           E++ +F    +I  +N  Y   D  T++++F       D C  +++ GD+ ++ + ++  
Sbjct: 50  EIAYIFCSDEKILEVNRTYLQHDYYTDIITF-------DYCKGNIISGDLFISLDTVKTN 102

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +      +   L   IIHG LHL G   ++DK     E +E++  E L I
Sbjct: 103 SEQFNTPYNEELHRTIIHGILHLCG---INDKGPGEREIMEQAENEALTI 149


>gi|150009548|ref|YP_001304291.1| hypothetical protein BDI_2961 [Parabacteroides distasonis ATCC
           8503]
 gi|255013159|ref|ZP_05285285.1| hypothetical protein B2_04585 [Bacteroides sp. 2_1_7]
 gi|166228935|sp|A6LG55|RRMF_PARD8 RecName: Full=Probable rRNA maturation factor
 gi|149937972|gb|ABR44669.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 142

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 23/145 (15%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLI---SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           A + ++I L      +  KAVS  I   ++ Y  K    ++S +F    +I  +N +Y  
Sbjct: 4   AYYAEDIQL----PAIKKKAVSGWIKAVAETYGKKTG--DISYIFCSDEKILEVNRQYLQ 57

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            D  T++++F     +       + GD+ ++ + +   A     ++   L   IIHG LH
Sbjct: 58  HDYYTDIITFDYTEGNK------ISGDLFISLDTVRTNAETFHTDYNEELHRTIIHGILH 111

Query: 137 LLGYDHVDDKDACVMEGLERSILED 161
           L G   ++DK        ER I+E+
Sbjct: 112 LCG---INDKGPG-----EREIMEE 128


>gi|298373953|ref|ZP_06983911.1| metalloprotease [Bacteroides sp. 3_1_19]
 gi|298268321|gb|EFI09976.1| metalloprotease [Bacteroides sp. 3_1_19]
          Length = 142

 Score = 37.0 bits (84), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 23/145 (15%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLI---SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           A + ++I L      +  KAVS  I   ++ Y  K    ++S +F    +I  +N +Y  
Sbjct: 4   AYYAEDIQL----PAIKKKAVSGWIKAVAETYGKKTG--DISYIFCSDEKILEVNRQYLQ 57

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            D  T++++F     +       + GD+ ++ + +   A     ++   L   IIHG LH
Sbjct: 58  HDYYTDIITFDYTEGNK------ISGDLFISLDTVRTNAETFHTDYNEELHRTIIHGILH 111

Query: 137 LLGYDHVDDKDACVMEGLERSILED 161
           L G   ++DK        ER I+E+
Sbjct: 112 LCG---INDKGPG-----EREIMEE 128


>gi|261749198|ref|YP_003256883.1| hypothetical protein BPLAN_108 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497290|gb|ACX83740.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 137

 Score = 37.0 bits (84), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++ +F + H +  LN +Y   D  T+V++F  A++S+    S   GD+ ++ + +   + 
Sbjct: 37  INYIFCNDHYLLNLNKKYLQKDYYTDVIAF--AYSSTPPNIS---GDVFISIDRVLENSQ 91

Query: 117 VLGKEFENHLVHLIIHGFLHLLGY-DHVDDK 146
              + F+  L  ++IH  LH LGY D +++K
Sbjct: 92  QWNQLFQVELKRVMIHAILHFLGYEDRINEK 122


>gi|237836653|ref|XP_002367624.1| phosphopantethiene--protein transferase domain containing protein
           [Toxoplasma gondii ME49]
 gi|211965288|gb|EEB00484.1| phosphopantethiene--protein transferase domain containing protein
           [Toxoplasma gondii ME49]
          Length = 772

 Score = 36.6 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           L IH  LHLLG+DH ++ DA  ME +E ++ 
Sbjct: 413 LFIHAVLHLLGFDHEEEGDAREMEAVEAALF 443


>gi|58700115|ref|ZP_00374639.1| metal-binding protein [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533369|gb|EAL57844.1| metal-binding protein [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 35

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 20/31 (64%)

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LHLLGYDH    +  +M+ LER IL  LG N
Sbjct: 1   LHLLGYDHQKKDEEIIMKNLEREILASLGYN 31


>gi|325286234|ref|YP_004262024.1| metalloprotease ybeY [Cellulophaga lytica DSM 7489]
 gi|324321688|gb|ADY29153.1| metalloprotease ybeY [Cellulophaga lytica DSM 7489]
          Length = 139

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++ +F D   +  +N +Y   D  T++++F      +DG   ++  DI ++ E ++  A
Sbjct: 35  DINYIFCDDSYLLNINQQYLNHDTYTDIITFD----YTDG--KVISSDIYISVERVKENA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                +F+  ++ ++ HG LHL GY     ++A +M   E
Sbjct: 89  VDFKVDFDVEMLRVMAHGLLHLAGYKDKSTEEAALMRSKE 128


>gi|300770444|ref|ZP_07080323.1| possible metal dependent hydrolase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762920|gb|EFK59737.1| possible metal dependent hydrolase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 142

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 8/96 (8%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           S+G+   + + EL+ +F+    +  +N +Y   D  T++++F      S      + GDI
Sbjct: 31  SEGF---KRVGELNFIFSSDAYLLEINKQYLNHDTFTDIVTF-----DSSEEEDTIAGDI 82

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
            ++ E I+  A        + L  ++IHG LHL GY
Sbjct: 83  FISIERIQDNAEKFKVAERDELHRVVIHGVLHLCGY 118


>gi|91215358|ref|ZP_01252329.1| hypothetical protein P700755_09598 [Psychroflexus torquis ATCC
           700755]
 gi|91186310|gb|EAS72682.1| hypothetical protein P700755_09598 [Psychroflexus torquis ATCC
           700755]
          Length = 143

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           ++ + EL+ VF     +  +N  Y   D  T++++F   +   D  S+    +I ++ + 
Sbjct: 33  QKTLGELTYVFCSDEYLLDINQSYLQHDTLTDIITFD--YTEGDSIST----EIYISIDR 86

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
           ++  A   G +FE  L  ++ HG LH  GY  +  ++  +M   E
Sbjct: 87  VKENAEEFGVDFEKELKRVMAHGVLHCCGYKDLTQEEKDLMRAKE 131


>gi|110639867|ref|YP_680077.1| hypothetical protein CHU_3501 [Cytophaga hutchinsonii ATCC 33406]
 gi|123354224|sp|Q11PC9|RRMF_CYTH3 RecName: Full=Probable rRNA maturation factor
 gi|110282548|gb|ABG60734.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 143

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 10/135 (7%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +  LR   E+   +   N I+K    K +I+EL+ +F     +  +N ++   D  T+++
Sbjct: 14  QYQLRQRAEI---RTWLNTIAKK--EKYSILELNYIFCSDEYLLQMNRDFLDHDYYTDII 68

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           +F  +          + GDI ++ + ++  A +     ++ L  ++ HG LHL GY    
Sbjct: 69  TFDNS-----EVKGKIEGDIFISIDRVKDNAQLQHSTVKDELHRVLAHGLLHLTGYKDKT 123

Query: 145 DKDACVMEGLERSIL 159
            K+  +M   E + L
Sbjct: 124 TKEKEMMRAKEDASL 138


>gi|322502702|emb|CBZ37785.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 213

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 28/51 (54%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIV 105
             LSL F     +  LN +Y+G D+PT+VL+F  A  +    + L+ GD +
Sbjct: 37  TRLSLEFVSLAHMRQLNCKYKGSDRPTDVLTFTPAGEADSFVNDLLFGDFL 87


>gi|262383157|ref|ZP_06076294.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296035|gb|EEY83966.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 143

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++S +F    +I  +N +Y   D  T++++F     +       + GD+ ++ + +   A
Sbjct: 37  DISYIFCSDEKILEVNRQYLQHDYYTDIITFDYTEGNK------ISGDLFISLDTVRTNA 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
                ++   L   IIHG LHL G   ++DK        ER I+E+
Sbjct: 91  ETFHTDYNEELHRTIIHGILHLCG---INDKGPG-----EREIMEE 128


>gi|227538918|ref|ZP_03968967.1| possible metal dependent hydrolase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227241121|gb|EEI91136.1| possible metal dependent hydrolase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 142

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 8/96 (8%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           S+G+   + + EL+ +F+    +  +N +Y   D  T++++F      S      + GDI
Sbjct: 31  SEGF---KRVGELNFIFSSDAYLLEINKQYLNHDTFTDIVTF-----DSSEEEDTIAGDI 82

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
            ++ E I+  A        + L  ++IHG LHL GY
Sbjct: 83  FISIERIQDNAEKFKVAERDELHRVVIHGVLHLCGY 118


>gi|256838280|ref|ZP_05543790.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739199|gb|EEU52523.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 142

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++S +F    +I  +N +Y   D  T++++F     +       + GD+ ++ + +   A
Sbjct: 37  DISYIFCSDEKILEVNRQYLQHDYYTDIITFDYTEGNK------ISGDLFISLDTVRTNA 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
                ++   L   IIHG LHL G   ++DK        ER I+E+
Sbjct: 91  ETFHTDYNEELHRTIIHGILHLCG---INDKGPG-----EREIMEE 128


>gi|301311742|ref|ZP_07217667.1| putative metalloprotease [Bacteroides sp. 20_3]
 gi|300830302|gb|EFK60947.1| putative metalloprotease [Bacteroides sp. 20_3]
          Length = 143

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++S +F    +I  +N +Y   D  T++++F     +       + GD+ ++ + +   A
Sbjct: 37  DISYIFCSDEKILEVNRQYLQHDYYTDIITFDYTEGNK------ISGDLFISLDTVRTNA 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
                ++   L   IIHG LHL G   ++DK        ER I+E+
Sbjct: 91  ETFHTDYNEELHRTIIHGILHLCG---INDKGPG-----EREIMEE 128


>gi|169840971|ref|ZP_02874084.1| Hypothetical Metal-Binding Protein [candidate division TM7
           single-cell isolate TM7a]
          Length = 34

 Score = 36.2 bits (82), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 19/27 (70%)

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSIL 159
           G LHLLGYDH++++D  VM   E  IL
Sbjct: 1   GMLHLLGYDHIEEEDKAVMRRREEEIL 27


>gi|78189140|ref|YP_379478.1| hypothetical protein Cag_1173 [Chlorobium chlorochromatii CaD3]
 gi|123579746|sp|Q3ARE0|RRMF_CHLCH RecName: Full=Probable rRNA maturation factor
 gi|78171339|gb|ABB28435.1| Protein of unknown function UPF0054 [Chlorobium chlorochromatii
           CaD3]
          Length = 156

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           I  ++ V+  +   + +N +Y   D PT+ ++F      S+G    + G+  ++ ++I  
Sbjct: 33  IATITGVYCGNRMSQRINRDYLNHDYPTDTITF----CYSEG--KAIEGEFYISLDVIRC 86

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            A      FE  L+ + IH  LHL G +    ++   M+  E   L+
Sbjct: 87  NARHFNVTFEEELLRVTIHSALHLTGMNDYLPEERVAMQAKEDYYLQ 133


>gi|323698302|ref|ZP_08110214.1| protein of unknown function UPF0054 [Desulfovibrio sp. ND132]
 gi|323458234|gb|EGB14099.1| protein of unknown function UPF0054 [Desulfovibrio desulfuricans
           ND132]
          Length = 164

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 15/97 (15%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-------------MLGDIV 105
           L   D   I  LN E+ G   PTN+LSFP      DG  +L              LG++ 
Sbjct: 46  LKLVDDREIARLNREFLGCTGPTNILSFPAR--DGDGTDALADGEVGDPEDDGEFLGELA 103

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           L+ + +  E ++ G+    HL  L+ HG LHL G+DH
Sbjct: 104 LSVDALARETDLYGQLPLEHLARLLAHGLLHLAGFDH 140


>gi|332872342|ref|XP_003319178.1| PREDICTED: rRNA maturation factor homolog isoform 3 [Pan
           troglodytes]
 gi|332872344|ref|XP_003319179.1| PREDICTED: rRNA maturation factor homolog isoform 4 [Pan
           troglodytes]
          Length = 121

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRVYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIFLGV 95

Query: 109 EII 111
           E I
Sbjct: 96  EYI 98


>gi|308809559|ref|XP_003082089.1| unnamed protein product [Ostreococcus tauri]
 gi|116060556|emb|CAL55892.1| unnamed protein product [Ostreococcus tauri]
          Length = 470

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           +ELS+       I +LN  YR  D  T+VLSFP   A S G  ++ LGD+V++ +    +
Sbjct: 84  MELSVALCSDEYIRSLNAGYRQKDSATDVLSFP---AESFGPMAV-LGDVVVSVDTAATQ 139

Query: 115 AN 116
           A 
Sbjct: 140 AR 141


>gi|223940463|ref|ZP_03632314.1| protein of unknown function UPF0054 [bacterium Ellin514]
 gi|223890866|gb|EEF57376.1| protein of unknown function UPF0054 [bacterium Ellin514]
          Length = 159

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T+V++F   ++ S G   L +G++ +  +   ++A      +++  +  I+HG LHL G
Sbjct: 63  STDVITFD--YSDSPGSEPL-IGELFICVDEALVQAIRFKTTWQSETMRYIVHGLLHLKG 119

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YD ++      M+  E  +L++L + 
Sbjct: 120 YDDLETTARRKMKREENKLLKELRVR 145


>gi|326335988|ref|ZP_08202165.1| metal dependent hydrolase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691952|gb|EGD33914.1| metal dependent hydrolase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 138

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++ +F +   +  +N +Y   D  T++++F        G  + +  DI ++ E ++  A
Sbjct: 36  DINYIFCNDEYLHKINVDYLQHDTLTDIITFDY------GKDNTLSSDIYISVERVKENA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGY 140
              G +    L+ ++ HG LHL GY
Sbjct: 90  QEYGVDLPTELLRVMAHGILHLCGY 114


>gi|54607074|ref|NP_001006114.1| rRNA maturation factor homolog isoform 2 [Homo sapiens]
 gi|55824657|gb|AAH22828.2| Chromosome 21 open reading frame 57 [Homo sapiens]
 gi|110645888|gb|AAI19771.1| Chromosome 21 open reading frame 57 [Homo sapiens]
 gi|114108258|gb|AAI22866.1| Chromosome 21 open reading frame 57 [Homo sapiens]
 gi|119629694|gb|EAX09289.1| chromosome 21 open reading frame 57, isoform CRA_b [Homo sapiens]
 gi|124297721|gb|AAI31554.1| Chromosome 21 open reading frame 57 [Homo sapiens]
 gi|221040460|dbj|BAH11937.1| unnamed protein product [Homo sapiens]
          Length = 121

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIFLGV 95

Query: 109 EII 111
           E I
Sbjct: 96  EYI 98


>gi|301092866|ref|XP_002997284.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]
 gi|262111419|gb|EEY69471.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]
          Length = 1287

 Score = 35.4 bits (80), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 15/70 (21%)

Query: 75   RGIDKPTNVLSFPTAFASSDG-CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
            R + KP  VL    AF+S D  C   +L               V+GKEF N  + LI H 
Sbjct: 1196 RSLLKPARVLILDEAFSSVDQECDKKLL--------------TVVGKEFANSTIFLITHR 1241

Query: 134  FLHLLGYDHV 143
               +LG+D +
Sbjct: 1242 LDQVLGFDRI 1251


>gi|116255645|ref|YP_771478.1| hypothetical protein pRL110444 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115260293|emb|CAK03397.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 442

 Score = 35.4 bits (80), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 76  GIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG-- 133
           G D      S P A A+ D  S+ ML + ++A     +E +V   +    +V  +I G  
Sbjct: 173 GTDSELKADSAPIALATDDATSAKMLMEALIAAPTFNLERSVGKAQGLGDVVSGLISGPR 232

Query: 134 -----FLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
                FL+ L Y  +  +   V E L +S+L  L +  P
Sbjct: 233 AAVARFLNQLTYYEMKKRAGIVGEALTKSVLSKLVLQQP 271


>gi|94987342|ref|YP_595275.1| metal-dependent hydrolase [Lawsonia intracellularis PHE/MN1-00]
 gi|145558844|sp|Q1MPX3|RRMF_LAWIP RecName: Full=Probable rRNA maturation factor
 gi|94731591|emb|CAJ54954.1| predicted metal-dependent hydrolase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 133

 Score = 35.4 bits (80), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 15/129 (11%)

Query: 21  LWGDEIHLRTL--CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           L G+E H+  L  C + F   +  ++S   F K   +E+ LV +D+  I   N  Y    
Sbjct: 5   LLGNE-HIWKLPFCRLEFVAILEKMLS---FAKLQTIEVYLV-SDT-TIAFFNLHYMNCL 58

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
             TNVLSFP      D     + G I+L+ + +  E+ +  +   ++ + L+ HG  H+ 
Sbjct: 59  GITNVLSFP--MDDED-----LAGSIILSVDAVCRESLLYRQPILDYCLSLLSHGIAHIA 111

Query: 139 GYDHVDDKD 147
           GY H  + D
Sbjct: 112 GYTHGVEMD 120


>gi|213027668|ref|ZP_03342115.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 36

 Score = 35.0 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           +LGD+++  +++E EA    K  E H  H+++HG
Sbjct: 3   LLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHG 36


>gi|297621266|ref|YP_003709403.1| hypothetical protein wcw_1038 [Waddlia chondrophila WSU 86-1044]
 gi|297376567|gb|ADI38397.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
          Length = 153

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI-IEIE 114
           E+S+ F D+  I  L+  +      T+ +SFP       G    +LG++ +  +  I+  
Sbjct: 36  EVSIQFVDTQMICDLHHRFFNDPTVTDCISFPIDQDGDTG--YRVLGEVFVCPKTGIDYA 93

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
              L   +E   ++ IIHG LHL+GYD + + +  + E  +R +
Sbjct: 94  QEHLKNPYEEISLY-IIHGLLHLMGYDDIGEDEPRMREAEKRHL 136


>gi|15835320|ref|NP_297079.1| hypothetical protein TC0705 [Chlamydia muridarum Nigg]
 gi|270285492|ref|ZP_06194886.1| hypothetical protein CmurN_03563 [Chlamydia muridarum Nigg]
 gi|270289504|ref|ZP_06195806.1| hypothetical protein CmurW_03658 [Chlamydia muridarum Weiss]
 gi|301336889|ref|ZP_07225091.1| hypothetical protein CmurM_03620 [Chlamydia muridarum MopnTet14]
 gi|62901393|sp|Q9PJX1|RRMF_CHLMU RecName: Full=Probable rRNA maturation factor
 gi|7190736|gb|AAF39519.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
          Length = 161

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 22/109 (20%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           F+D    +T+      ID+P  + SFP            +LG+   A+         LG+
Sbjct: 63  FSDPSLTDTITL---PIDRP-GIQSFPH-----------VLGE---AFVSPRAAMRFLGQ 104

Query: 121 EFENHLVH----LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             E  L H     ++H  LH+LGYD   D+D  +M   E S L  L  N
Sbjct: 105 YTEAQLYHEISRYVVHSLLHMLGYDDQTDEDKRIMREQEDSSLTFLAQN 153


>gi|119629699|gb|EAX09294.1| chromosome 21 open reading frame 57, isoform CRA_f [Homo sapiens]
          Length = 144

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-------TAFASSDGCSSLMLGDIVLAY 108
           +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI L  
Sbjct: 36  DLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIFLGV 95

Query: 109 EII 111
           E I
Sbjct: 96  EYI 98


>gi|146099524|ref|XP_001468666.1| hypothetical protein [Leishmania infantum]
 gi|134073034|emb|CAM71753.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 213

 Score = 35.0 bits (79), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIV 105
             L+L F     +  LN +Y+G D+PT+VL+F  A  +    + L+ GD +
Sbjct: 37  TRLNLEFVSLAHMRQLNCKYKGSDRPTDVLTFTPAGEADSFVNDLLFGDFL 87


>gi|255536700|ref|YP_003097071.1| predicted metal-dependent hydrolase [Flavobacteriaceae bacterium
           3519-10]
 gi|255342896|gb|ACU09009.1| predicted metal-dependent hydrolase [Flavobacteriaceae bacterium
           3519-10]
          Length = 142

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 11/109 (10%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L+ VF     +  +N EY   D  T++++F      +      + GDI ++   I   A 
Sbjct: 43  LNYVFCSDEYLLKINREYLDHDYLTDIITFDYVKGKT------VSGDIFVSLHRISENAL 96

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +    F+  L+ +  HG LHL GY     KD   +E  E    ED  IN
Sbjct: 97  LHDNSFDTELLRVTAHGLLHLCGY-----KDKTEVEISEMRSKEDFYIN 140


>gi|86144117|ref|ZP_01062454.1| hypothetical protein MED217_18401 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829379|gb|EAQ47844.1| hypothetical protein MED217_18401 [Leeuwenhoekiella blandensis
           MED217]
          Length = 137

 Score = 34.3 bits (77), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           I  L  VF     +  +N ++   D  T++++F      ++G  +++ G+I ++ + +  
Sbjct: 33  IDSLGYVFCSDDFLLEINQQFLDHDTLTDIVTFDY----TEG--TILNGEIYISTDRVAD 86

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGY-DHVDDK 146
            A     +F+  L  +IIHG LH+ GY D  DD+
Sbjct: 87  NAKDFNVDFDTELRRVIIHGLLHMCGYGDKTDDE 120


>gi|213422920|ref|ZP_03355946.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 36

 Score = 34.3 bits (77), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 140 YDHVDDKDACVMEGLERSILEDLGINDPY 168
           YDH+DD +A  ME LE  I+  +G  DPY
Sbjct: 1   YDHIDDDEAEEMESLETEIMLAMGYEDPY 29


>gi|297597588|ref|NP_001044196.2| Os01g0739400 [Oryza sativa Japonica Group]
 gi|255673671|dbj|BAF06110.2| Os01g0739400 [Oryza sativa Japonica Group]
          Length = 251

 Score = 33.9 bits (76), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S++  + + I+ LN E+RG D    +LS        D    LMLGDIV++ E    +
Sbjct: 171 VEVSVLLCNDNFIQNLNKEWRGEDSCIEMLSMSQYIPDLD-VPILMLGDIVISVETAARQ 229

Query: 115 ANVLG 119
           A   G
Sbjct: 230 AEERG 234


>gi|156098161|ref|XP_001615113.1| holo-(acyl-carrier protein) synthase [Plasmodium vivax SaI-1]
 gi|148803987|gb|EDL45386.1| holo-(acyl-carrier protein) synthase, putative [Plasmodium vivax]
          Length = 511

 Score = 33.9 bits (76), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 24/130 (18%)

Query: 19  NALWGDEIHLRTLCEVV------------FAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           N +WG       L E+V            F K V  LI   + ++    +L++ F     
Sbjct: 29  NPMWGGNYERNGLLEIVNNQTEVPIDLAHFEKEVRKLI---HLMRFEDFQLNITFVSLKE 85

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCS---------SLMLGDIVLAYEIIEIEANV 117
           ++ +N  +RG ++PT+V+S      S +G S          L  GDI L    I  E  +
Sbjct: 86  MKEVNRTHRGKNEPTDVISLLHCVHSGEGVSPGGDFASGGGLRSGDIYLCPAYISRECVL 145

Query: 118 LGKEFENHLV 127
               +E  L+
Sbjct: 146 ARVRYERGLL 155


Searching..................................................done


Results from round 2




>gi|254780427|ref|YP_003064840.1| hypothetical protein CLIBASIA_01560 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040104|gb|ACT56900.1| hypothetical protein CLIBASIA_01560 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 171

 Score =  254 bits (650), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV
Sbjct: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK
Sbjct: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD
Sbjct: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171


>gi|222147353|ref|YP_002548310.1| hypothetical protein Avi_0440 [Agrobacterium vitis S4]
 gi|254803905|sp|B9JZJ4|RRMF_AGRVS RecName: Full=Probable rRNA maturation factor
 gi|221734343|gb|ACM35306.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 167

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/162 (45%), Positives = 96/162 (59%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + +LD+QIA+E   W DE  L  L   +   A   + ++G        E+SLVFT    I
Sbjct: 1   MKKLDVQIAIEADGWPDEAELEALSTRILDHAADFIAAEGQPFAPMPAEVSLVFTGDTEI 60

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           + +N E+RG DKPTNVLSFP            MLGDIV+A + +E EA  L K   +HL 
Sbjct: 61  QAINSEWRGQDKPTNVLSFPAYPIEPGDKPGPMLGDIVIARQTVEREAAELEKTITDHLT 120

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           HL++HGFLHL GYDH+ + +A  MEGLE  IL  LG++DPY 
Sbjct: 121 HLMVHGFLHLFGYDHMTEDEAEEMEGLETRILAGLGLSDPYA 162


>gi|241202783|ref|YP_002973879.1| hypothetical protein Rleg_0029 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856673|gb|ACS54340.1| protein of unknown function UPF0054 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 171

 Score =  211 bits (537), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 79/163 (48%), Positives = 102/163 (62%), Gaps = 1/163 (0%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHR 66
           +  LD+QI+VE+  W  E  L + CE V   AV  L  S+         E+SLVFTD   
Sbjct: 1   MAELDIQISVEDIGWPGEETLLSFCERVLGAAVVYLSDSEKQPFPTLPPEVSLVFTDDAS 60

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ +N E+RG DK TNVLSFP            MLGDI++A E +E EA  L K F++HL
Sbjct: 61  IQDINAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETLEREAAELEKSFDDHL 120

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 121 THLLVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 163


>gi|86356031|ref|YP_467923.1| hypothetical protein RHE_CH00374 [Rhizobium etli CFN 42]
 gi|123513247|sp|Q2KD90|RRMF_RHIEC RecName: Full=Probable rRNA maturation factor
 gi|86280133|gb|ABC89196.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 171

 Score =  211 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 77/163 (47%), Positives = 101/163 (61%), Gaps = 1/163 (0%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDSHR 66
           +  LD+QI++E+  W  E  L   CE V   A   L   +     +   E+SLVFTD   
Sbjct: 1   MAELDIQISIEDIGWPGEETLLVFCERVLGAAAIYLRDNEKQPFPKMPPEVSLVFTDDAS 60

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ +N E+RG DKPTNVLSFP            MLGDI++A E +E EA  L K F++HL
Sbjct: 61  IQDINAEWRGKDKPTNVLSFPAFPVQRGKVPGPMLGDIIIARETVEREAQELEKSFDDHL 120

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HGFLHLLGYDH+++ +A  MEGLE  IL  LG++DPYE
Sbjct: 121 THLLVHGFLHLLGYDHMNNAEAETMEGLETRILAQLGLSDPYE 163


>gi|116250162|ref|YP_766000.1| hypothetical protein RL0393 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|145558823|sp|Q1MMB8|RRMF_RHIL3 RecName: Full=Probable rRNA maturation factor
 gi|115254810|emb|CAK05884.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 171

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 77/163 (47%), Positives = 100/163 (61%), Gaps = 1/163 (0%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDSHR 66
           +  LD+QI+VE+  W  E  L + CE V   A   L          +  E+SLVFTD   
Sbjct: 1   MAELDIQISVEDIGWPGEETLLSFCERVLGAAAVYLRDSEKQPFPTMAPEVSLVFTDDAS 60

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ +N E+RG DK TNVLSFP            MLGDI++A E +E EA  L K F++HL
Sbjct: 61  IQDINAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETLEREAAELEKSFDDHL 120

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 121 THLLVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 163


>gi|190890044|ref|YP_001976586.1| hypothetical protein RHECIAT_CH0000414 [Rhizobium etli CIAT 652]
 gi|238692546|sp|B3PZB4|RRMF_RHIE6 RecName: Full=Probable rRNA maturation factor
 gi|190695323|gb|ACE89408.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 171

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 78/163 (47%), Positives = 102/163 (62%), Gaps = 1/163 (0%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVF-AKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           +  LD+QI++EN  W +E  L   C  V  A AV    S+         E+SLVFTD   
Sbjct: 1   MAELDIQISIENIGWPEEETLLAFCGRVLGAAAVYLRDSEKQPFPTMPPEVSLVFTDDAS 60

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ +N E+RG DK TNVLSFP            MLGDI++A E +E EA+ L K F++HL
Sbjct: 61  IQDINAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETVEREAHELEKSFDDHL 120

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 121 THLLVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 163


>gi|327188595|gb|EGE55805.1| hypothetical protein RHECNPAF_850041 [Rhizobium etli CNPAF512]
          Length = 171

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/163 (47%), Positives = 102/163 (62%), Gaps = 1/163 (0%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVF-AKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           +  LD+QI++EN  W +E  L   C  V  A AV    S+         E+SLVFTD   
Sbjct: 1   MAELDIQISIENIGWPEEETLLAFCGHVLGAAAVYLRDSEKQPFPTLPPEVSLVFTDDAS 60

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ +N E+RG DK TNVLSFP            MLGDI++A E +E EA+ L K F++HL
Sbjct: 61  IQDINAEWRGKDKATNVLSFPAFPVQPGKMPGPMLGDIIIARETVEREAHELEKSFDDHL 120

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 121 THLLVHGFLHLLGYDHMNSAEAEIMEGLETRILAQLGLSDPYE 163


>gi|15964160|ref|NP_384513.1| hypothetical protein SMc01113 [Sinorhizobium meliloti 1021]
 gi|307301305|ref|ZP_07581067.1| protein of unknown function UPF0054 [Sinorhizobium meliloti BL225C]
 gi|307317976|ref|ZP_07597413.1| protein of unknown function UPF0054 [Sinorhizobium meliloti AK83]
 gi|26006908|sp|Q92SI5|RRMF_RHIME RecName: Full=Probable rRNA maturation factor
 gi|15073336|emb|CAC41844.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306896378|gb|EFN27127.1| protein of unknown function UPF0054 [Sinorhizobium meliloti AK83]
 gi|306903761|gb|EFN34348.1| protein of unknown function UPF0054 [Sinorhizobium meliloti BL225C]
          Length = 168

 Score =  206 bits (526), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 77/159 (48%), Positives = 97/159 (61%), Gaps = 1/159 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE   W  E  L++ CE V   A   L   +   +     ELSLVFTD   I  
Sbjct: 4   LDIQISVEAGDWPPEDELQSFCERVLEAAADFLAREENQPLPAQAAELSLVFTDDQSIRA 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+RG DK TNVLSFP    +       MLGDIV+A+E +  EA  L K F+ HL HL
Sbjct: 64  INAEWRGQDKATNVLSFPAFPVTPGRMPGPMLGDIVVAHETLRREAAELEKPFDAHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HGFLHL GYDH++D +A  MEGLE  IL  LG++DPY
Sbjct: 124 LVHGFLHLFGYDHIEDDEAERMEGLETRILARLGLSDPY 162


>gi|209547629|ref|YP_002279546.1| hypothetical protein Rleg2_0017 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226701630|sp|B5ZMX9|RRMF_RHILW RecName: Full=Probable rRNA maturation factor
 gi|209533385|gb|ACI53320.1| protein of unknown function UPF0054 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 171

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/163 (47%), Positives = 101/163 (61%), Gaps = 1/163 (0%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNL-ISKGYFVKENIVELSLVFTDSHR 66
           +  LD+QI+V++  W  E  L + CE V   AV  L  S+         E+SLVFTD   
Sbjct: 1   MAELDIQISVDDIGWPGEETLLSFCERVLGAAVIYLRDSEKQPFPTMPPEVSLVFTDDAS 60

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ +N E+RG DK TNVLSFP            MLGDI++A E +E E   L K F++HL
Sbjct: 61  IQDINAEWRGKDKATNVLSFPAFPVRPGKMPGPMLGDIIIARETVERETIELEKSFDDHL 120

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 121 THLLVHGFLHLLGYDHMNSDEAEIMEGLETRILAQLGLSDPYE 163


>gi|222084695|ref|YP_002543224.1| hypothetical protein Arad_0658 [Agrobacterium radiobacter K84]
 gi|221722143|gb|ACM25299.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 169

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 75/163 (46%), Positives = 99/163 (60%), Gaps = 1/163 (0%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDSHR 66
           +  LD+QI+VE   W  E  L+ L E V   A + L   +     +  +E+SLVFTD   
Sbjct: 2   MAELDIQISVEEGDWPSEDVLQALAERVLGVAAAYLKKNEKQPFPKTALEVSLVFTDDAA 61

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I  +N E+R  DK TNVLSFP       G    MLGDI++A E +E EA  L K F++HL
Sbjct: 62  IREINAEWREQDKATNVLSFPAFPLVPGGKPGPMLGDIIIARETVEREAVELEKSFDDHL 121

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HGFLHL GYDH+++ +A  MEGLE  IL  LG++DPY 
Sbjct: 122 THLMVHGFLHLFGYDHMNNSEAERMEGLETRILAGLGLSDPYA 164


>gi|153008092|ref|YP_001369307.1| hypothetical protein Oant_0756 [Ochrobactrum anthropi ATCC 49188]
 gi|166228855|sp|A6WWX4|RRMF_OCHA4 RecName: Full=Probable rRNA maturation factor
 gi|151559980|gb|ABS13478.1| protein of unknown function UPF0054 [Ochrobactrum anthropi ATCC
           49188]
          Length = 162

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/160 (50%), Positives = 95/160 (59%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I VE   W DE  L  L       A +NL      +K    ELS+VFTD   I+TL
Sbjct: 6   IHIDIMVEAGNWPDETALEGLVRKSVEAAWANL-----GLKSAASELSVVFTDDASIQTL 60

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFP     +      MLGDI++A E +E EA   GK  ENHL HL+
Sbjct: 61  NAEWRGKDKPTNVLSFPAFPVKAGAQPGPMLGDIIIARETVEREAREEGKPLENHLAHLV 120

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHLLGYDH  D +A VMEG ER IL  L I DPY V
Sbjct: 121 VHGFLHLLGYDHETDAEAEVMEGREREILHALAIPDPYAV 160


>gi|306843573|ref|ZP_07476174.1| conserved hypothetical protein [Brucella sp. BO1]
 gi|306276264|gb|EFM57964.1| conserved hypothetical protein [Brucella sp. BO1]
          Length = 195

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/160 (50%), Positives = 96/160 (60%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ L
Sbjct: 33  IHIDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLL 87

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL+
Sbjct: 88  NGEWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLV 147

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 148 VHGFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 187


>gi|189025205|ref|YP_001935973.1| Diacyglycerol kinase [Brucella abortus S19]
 gi|237816495|ref|ZP_04595488.1| conserved hypothetical protein [Brucella abortus str. 2308 A]
 gi|189020777|gb|ACD73499.1| Diacyglycerol kinase [Brucella abortus S19]
 gi|237788562|gb|EEP62777.1| conserved hypothetical protein [Brucella abortus str. 2308 A]
          Length = 190

 Score =  204 bits (519), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 80/160 (50%), Positives = 96/160 (60%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ L
Sbjct: 28  IHIDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLL 82

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL+
Sbjct: 83  NGEWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLV 142

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 143 VHGFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 182


>gi|306837707|ref|ZP_07470576.1| conserved hypothetical protein [Brucella sp. NF 2653]
 gi|306407265|gb|EFM63475.1| conserved hypothetical protein [Brucella sp. NF 2653]
          Length = 195

 Score =  204 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 79/160 (49%), Positives = 96/160 (60%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ L
Sbjct: 33  IHIDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLL 87

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFP     +      +LGDIV+A E +E EA   GK  ENHL HL+
Sbjct: 88  NGEWRGKDKPTNVLSFPAFPVKAGSQPGPLLGDIVIARETVEREAKEEGKPIENHLSHLV 147

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 148 VHGFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 187


>gi|227820630|ref|YP_002824600.1| hypothetical protein NGR_c00430 [Sinorhizobium fredii NGR234]
 gi|254799468|sp|C3MF10|RRMF_RHISN RecName: Full=Probable rRNA maturation factor
 gi|227339629|gb|ACP23847.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 173

 Score =  203 bits (518), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 77/159 (48%), Positives = 100/159 (62%), Gaps = 1/159 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKG-YFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE   W  E  L+ L   +    V+ LI++      ++  ELSLVFTD   I  
Sbjct: 4   LDIQISVEEGDWPSEDELQGLSTRILDVTVAFLIAEEKQPFPDDPPELSLVFTDDQSIRE 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+R  DKPTNVLSFP    +       MLGDI++AYE +E EA  + K FE HL HL
Sbjct: 64  INAEWRNQDKPTNVLSFPAFPVTPGNMPGPMLGDIIVAYETLEREAAEMEKPFEEHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HGFLHL GYDH++D +A  MEGLE  IL  LG++DPY
Sbjct: 124 LVHGFLHLFGYDHIEDDEAERMEGLETRILARLGLSDPY 162


>gi|37197841|dbj|BAC93679.1| predicted metal-dependent hydrolase [Vibrio vulnificus YJ016]
          Length = 250

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     D+  L +      A+     + K     +   E+++   DS     
Sbjct: 100 ELDLQLAVE-----DQNGLPS------AQDFQTWLDKTIPPFQPQAEVTIRIVDSQESHQ 148

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H+
Sbjct: 149 LNHDYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEQEAIEQDKPLMAHWAHM 206

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 207 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFTDPYLAE 248


>gi|150395270|ref|YP_001325737.1| hypothetical protein Smed_0042 [Sinorhizobium medicae WSM419]
 gi|166227780|sp|A6U5H2|RRMF_SINMW RecName: Full=Probable rRNA maturation factor
 gi|150026785|gb|ABR58902.1| protein of unknown function UPF0054 [Sinorhizobium medicae WSM419]
          Length = 168

 Score =  202 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 78/159 (49%), Positives = 99/159 (62%), Gaps = 1/159 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKG-YFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE   W  E  L++  EVV   A   L  +    +     ELSLVFTD   I+ 
Sbjct: 4   LDIQISVEAGDWPPEDELQSFSEVVLEAAADFLAREERQPLSAEAAELSLVFTDDQSIKA 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+RG DKPTNVLSFP    +      LMLGDIV+A+E +  EA  L K F+ HL HL
Sbjct: 64  INAEWRGQDKPTNVLSFPAFPVTPGKMPGLMLGDIVVAHETLRREAAELEKPFDAHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HGFLHL GYDH++D +A  ME LE  IL  LG++DPY
Sbjct: 124 LVHGFLHLFGYDHIEDDEAERMERLETRILARLGLSDPY 162


>gi|315122127|ref|YP_004062616.1| hypothetical protein CKC_01885 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495529|gb|ADR52128.1| hypothetical protein CKC_01885 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 163

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 112/166 (67%), Positives = 136/166 (81%), Gaps = 3/166 (1%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +N P+L+L IAVE+ LWG++  L  LCEVV AKA+S L SK  F  E+ +E+S VFTDS+
Sbjct: 1   MNPPKLNLHIAVESELWGEDFDLSVLCEVVLAKAISFLTSKKDFSLED-IEVSFVFTDSN 59

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           RI+ LN +YRGIDKPTNVLSFP+  +S    S  MLGDIVLAYE++E EANVLGK+F++H
Sbjct: 60  RIKELNAQYRGIDKPTNVLSFPSVLSSE--YSGAMLGDIVLAYEVMEAEANVLGKKFKDH 117

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           LVHLIIHGFLHLL YDHVDD+DA +MEGLERSIL DLGI+DPYE+D
Sbjct: 118 LVHLIIHGFLHLLRYDHVDDEDARLMEGLERSILADLGIDDPYELD 163


>gi|17988257|ref|NP_540891.1| diacyglycerol kinase [Brucella melitensis bv. 1 str. 16M]
 gi|161620064|ref|YP_001593951.1| hypothetical protein BCAN_A2198 [Brucella canis ATCC 23365]
 gi|163844169|ref|YP_001628574.1| hypothetical protein BSUIS_A1993 [Brucella suis ATCC 23445]
 gi|225626522|ref|ZP_03784561.1| conserved hypothetical protein [Brucella ceti str. Cudo]
 gi|225853581|ref|YP_002733814.1| hypothetical protein BMEA_A2215 [Brucella melitensis ATCC 23457]
 gi|254690287|ref|ZP_05153541.1| Diacyglycerol kinase [Brucella abortus bv. 6 str. 870]
 gi|254694775|ref|ZP_05156603.1| Diacyglycerol kinase [Brucella abortus bv. 3 str. Tulya]
 gi|254696403|ref|ZP_05158231.1| Diacyglycerol kinase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700785|ref|ZP_05162613.1| Diacyglycerol kinase [Brucella suis bv. 5 str. 513]
 gi|254705154|ref|ZP_05166982.1| Diacyglycerol kinase [Brucella suis bv. 3 str. 686]
 gi|254707329|ref|ZP_05169157.1| Diacyglycerol kinase [Brucella pinnipedialis M163/99/10]
 gi|254709130|ref|ZP_05170941.1| Diacyglycerol kinase [Brucella pinnipedialis B2/94]
 gi|254713445|ref|ZP_05175256.1| Diacyglycerol kinase [Brucella ceti M644/93/1]
 gi|254716199|ref|ZP_05178010.1| Diacyglycerol kinase [Brucella ceti M13/05/1]
 gi|254731316|ref|ZP_05189894.1| Diacyglycerol kinase [Brucella abortus bv. 4 str. 292]
 gi|256030655|ref|ZP_05444269.1| Diacyglycerol kinase [Brucella pinnipedialis M292/94/1]
 gi|256045759|ref|ZP_05448637.1| Diacyglycerol kinase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060116|ref|ZP_05450298.1| Diacyglycerol kinase [Brucella neotomae 5K33]
 gi|256112478|ref|ZP_05453399.1| Diacyglycerol kinase [Brucella melitensis bv. 3 str. Ether]
 gi|256158657|ref|ZP_05456540.1| Diacyglycerol kinase [Brucella ceti M490/95/1]
 gi|256254061|ref|ZP_05459597.1| Diacyglycerol kinase [Brucella ceti B1/94]
 gi|256258540|ref|ZP_05464076.1| Diacyglycerol kinase [Brucella abortus bv. 9 str. C68]
 gi|260169559|ref|ZP_05756370.1| Diacyglycerol kinase [Brucella sp. F5/99]
 gi|260755827|ref|ZP_05868175.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260759050|ref|ZP_05871398.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260760775|ref|ZP_05873118.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884852|ref|ZP_05896466.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261215102|ref|ZP_05929383.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261217973|ref|ZP_05932254.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221202|ref|ZP_05935483.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261314811|ref|ZP_05954008.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261316630|ref|ZP_05955827.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261321177|ref|ZP_05960374.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261324093|ref|ZP_05963290.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261751294|ref|ZP_05995003.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261755859|ref|ZP_05999568.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|265987702|ref|ZP_06100259.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265992176|ref|ZP_06104733.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993914|ref|ZP_06106471.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265997163|ref|ZP_06109720.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|294851380|ref|ZP_06792053.1| metalloprotease [Brucella sp. NVSL 07-0026]
 gi|54040443|sp|P67133|RRMF_BRUSU RecName: Full=Probable rRNA maturation factor
 gi|54042632|sp|P67132|RRMF_BRUME RecName: Full=Probable rRNA maturation factor
 gi|145572768|sp|Q57AA9|RRMF_BRUAB RecName: Full=Probable rRNA maturation factor
 gi|145572769|sp|Q2YQS6|RRMF_BRUA2 RecName: Full=Probable rRNA maturation factor
 gi|189039424|sp|B0CK02|RRMF_BRUSI RecName: Full=Probable rRNA maturation factor
 gi|189039776|sp|A9M9Y5|RRMF_BRUC2 RecName: Full=Probable rRNA maturation factor
 gi|254801689|sp|C0RG38|RRMF_BRUMB RecName: Full=Probable rRNA maturation factor
 gi|17984025|gb|AAL53155.1| diacyglycerol kinase [Brucella melitensis bv. 1 str. 16M]
 gi|161336875|gb|ABX63180.1| conserved hypothetical protein [Brucella canis ATCC 23365]
 gi|163674892|gb|ABY39003.1| conserved hypothetical protein [Brucella suis ATCC 23445]
 gi|225618179|gb|EEH15222.1| conserved hypothetical protein [Brucella ceti str. Cudo]
 gi|225641946|gb|ACO01860.1| conserved hypothetical protein [Brucella melitensis ATCC 23457]
 gi|260669368|gb|EEX56308.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671207|gb|EEX58028.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675935|gb|EEX62756.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260874380|gb|EEX81449.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260916709|gb|EEX83570.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260919786|gb|EEX86439.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260923062|gb|EEX89630.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261293867|gb|EEX97363.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261295853|gb|EEX99349.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261300073|gb|EEY03570.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261303837|gb|EEY07334.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261741047|gb|EEY28973.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261745612|gb|EEY33538.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262551631|gb|EEZ07621.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|262764895|gb|EEZ10816.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003242|gb|EEZ15535.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|264659899|gb|EEZ30160.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294819969|gb|EFG36968.1| metalloprotease [Brucella sp. NVSL 07-0026]
 gi|326410154|gb|ADZ67219.1| diacylglycerol kinase [Brucella melitensis M28]
 gi|326539872|gb|ADZ88087.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 168

 Score =  200 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 80/160 (50%), Positives = 96/160 (60%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ L
Sbjct: 6   IHIDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLL 60

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL+
Sbjct: 61  NGEWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLV 120

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 121 VHGFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 160


>gi|62290993|ref|YP_222786.1| hypothetical protein BruAb1_2129 [Brucella abortus bv. 1 str.
           9-941]
 gi|260546256|ref|ZP_05821996.1| diacylglycerol kinase [Brucella abortus NCTC 8038]
 gi|260563055|ref|ZP_05833541.1| diacylglycerol kinase [Brucella melitensis bv. 1 str. 16M]
 gi|260567377|ref|ZP_05837847.1| diacylglycerol kinase [Brucella suis bv. 4 str. 40]
 gi|261759087|ref|ZP_06002796.1| diacylglycerol kinase [Brucella sp. F5/99]
 gi|265999239|ref|ZP_05465467.2| diacylglycerol kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|297247379|ref|ZP_06931097.1| diacylglycerol kinase [Brucella abortus bv. 5 str. B3196]
 gi|62197125|gb|AAX75425.1| conserved hypothetical protein TIGR00043 [Brucella abortus bv. 1
           str. 9-941]
 gi|260096363|gb|EEW80239.1| diacylglycerol kinase [Brucella abortus NCTC 8038]
 gi|260153071|gb|EEW88163.1| diacylglycerol kinase [Brucella melitensis bv. 1 str. 16M]
 gi|260156895|gb|EEW91975.1| diacylglycerol kinase [Brucella suis bv. 4 str. 40]
 gi|261739071|gb|EEY27067.1| diacylglycerol kinase [Brucella sp. F5/99]
 gi|263092809|gb|EEZ16984.1| diacylglycerol kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|297174548|gb|EFH33895.1| diacylglycerol kinase [Brucella abortus bv. 5 str. B3196]
          Length = 171

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 80/160 (50%), Positives = 96/160 (60%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ L
Sbjct: 9   IHIDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLL 63

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL+
Sbjct: 64  NGEWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLV 123

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 124 VHGFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 163


>gi|254718193|ref|ZP_05180004.1| Diacyglycerol kinase [Brucella sp. 83/13]
 gi|265983151|ref|ZP_06095886.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|264661743|gb|EEZ32004.1| conserved hypothetical protein [Brucella sp. 83/13]
          Length = 168

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 79/160 (49%), Positives = 96/160 (60%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ L
Sbjct: 6   IHIDIMIEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLL 60

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFP     +      +LGDIV+A E +E EA   GK  ENHL HL+
Sbjct: 61  NGEWRGKDKPTNVLSFPAFPVKAGSQPGPLLGDIVIARETVEREAKEEGKPIENHLSHLV 120

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHLLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 121 VHGFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAV 160


>gi|306842736|ref|ZP_07475378.1| conserved hypothetical protein [Brucella sp. BO2]
 gi|306287080|gb|EFM58585.1| conserved hypothetical protein [Brucella sp. BO2]
          Length = 158

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/154 (51%), Positives = 93/154 (60%), Gaps = 5/154 (3%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN E+RG
Sbjct: 2   IEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQVLNGEWRG 56

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL++HGFLH
Sbjct: 57  KDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVHGFLH 116

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           LLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 117 LLGYDHETDEEAEVMEAREREILHALAIPDPYAV 150


>gi|239833204|ref|ZP_04681533.1| conserved hypothetical protein [Ochrobactrum intermedium LMG 3301]
 gi|239825471|gb|EEQ97039.1| conserved hypothetical protein [Ochrobactrum intermedium LMG 3301]
          Length = 162

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/160 (50%), Positives = 96/160 (60%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E   W +E  L  L       A SNL      +K    ELS+VFTD   I+TL
Sbjct: 6   IHIDIMIEAGNWQEENALEGLVRKSVEAAWSNL-----GLKSAASELSVVFTDDASIQTL 60

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFP     +      MLGDI++A E +E EA   GK  ENHLVHL+
Sbjct: 61  NAEWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIIIARETVEREALEEGKPLENHLVHLV 120

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHLLGYDH  D +A VMEG ER IL  L I DPY V
Sbjct: 121 VHGFLHLLGYDHETDAEAEVMEGREREILHALAIPDPYAV 160


>gi|23503004|ref|NP_699131.1| hypothetical protein BR2156 [Brucella suis 1330]
 gi|82700902|ref|YP_415476.1| hypothetical protein BAB1_2156 [Brucella melitensis biovar Abortus
           2308]
 gi|148560239|ref|YP_001259950.1| hypothetical protein BOV_2068 [Brucella ovis ATCC 25840]
 gi|256370551|ref|YP_003108062.1| metal-dependent hydrolase [Brucella microti CCM 4915]
 gi|23349044|gb|AAN31046.1| conserved hypothetical protein TIGR00043 [Brucella suis 1330]
 gi|82617003|emb|CAJ12112.1| Protein of unknown function UPF0054 [Brucella melitensis biovar
           Abortus 2308]
 gi|148371496|gb|ABQ61475.1| conserved hypothetical protein TIGR00043 [Brucella ovis ATCC 25840]
 gi|256000714|gb|ACU49113.1| metal-dependent hydrolase [Brucella microti CCM 4915]
          Length = 158

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/154 (51%), Positives = 93/154 (60%), Gaps = 5/154 (3%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E   W DE  L +L     A A +NL      +K    ELS+VFTD   I+ LN E+RG
Sbjct: 2   IEAGNWPDEASLESLVSKSVAAAWNNL-----GLKSATSELSVVFTDDASIQLLNGEWRG 56

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            DKPTNVLSFP     +      MLGDIV+A E +E EA   GK  ENHL HL++HGFLH
Sbjct: 57  KDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVHGFLH 116

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           LLGYDH  D++A VME  ER IL  L I DPY V
Sbjct: 117 LLGYDHETDEEAEVMEAREREILHALAIPDPYAV 150


>gi|157376605|ref|YP_001475205.1| putative metalloprotease [Shewanella sediminis HAW-EB3]
 gi|189040151|sp|A8FZ04|RRMF_SHESH RecName: Full=Probable rRNA maturation factor
 gi|157318979|gb|ABV38077.1| protein of unknown function UPF0054 [Shewanella sediminis HAW-EB3]
          Length = 158

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 14/160 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A+EN+    + +          K ++              EL++   D    + 
Sbjct: 11  DLDLQLAIENSQLPSKQNFELWVRTALPKTMAE------------AELTIRIVDEAESQE 58

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +       +LGD+++   ++E+EA    K  + H  H+
Sbjct: 59  LNSTYRGKDKPTNVLSFP--FEAPPEIEIPLLGDLIICAPVVELEALQQNKPLQAHWAHM 116

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HG LHLLGYDH++D +A  ME LE  ++E LG N+PY+
Sbjct: 117 VVHGCLHLLGYDHINDAEAEEMESLETQLVESLGFNNPYK 156


>gi|293397292|ref|ZP_06641564.1| metal-dependent hydrolase [Serratia odorifera DSM 4582]
 gi|291420210|gb|EFE93467.1| metal-dependent hydrolase [Serratia odorifera DSM 4582]
          Length = 157

 Score =  194 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVENA-LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA E+A    DE   +   E V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQIACEHANGLPDEAAFQRWLEGVLPQ------------FQAEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E 
Sbjct: 49  AESHQLNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAVEQGKALEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I++ LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMQGLGYQDPYLAE 153


>gi|253990621|ref|YP_003041977.1| metalloprotease [Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949]
 gi|253782071|emb|CAQ85235.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 155

 Score =  194 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQIA EN+    E       E +F + +  ++ +     +   E+++   D  
Sbjct: 1   MSSVILDLQIACENSQNLPE-------ETLFQRWLDGVLPQ----FQPESEVTIRIVDET 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H
Sbjct: 50  ESHDLNLTYRGKDKPTNVLSFP--FEAPPEVDLPLLGDLIICRQVVEKEAEEQQKTVEEH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH+ D +A  ME LE  I++ LG +DPY  +
Sbjct: 108 WAHMVVHGCLHLLGYDHIADDEAEEMESLETEIMQKLGYSDPYLAE 153


>gi|152985334|ref|YP_001346512.1| putative metalloprotease [Pseudomonas aeruginosa PA7]
 gi|150960492|gb|ABR82517.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 168

 Score =  193 bits (491), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 63/171 (36%), Positives = 85/171 (49%), Gaps = 15/171 (8%)

Query: 2   SVKKVNLP-RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           + + V +P  LDLQ+A + A    E   R  CE+   +   +             EL++ 
Sbjct: 3   AARAVTMPLELDLQVASDAADLPSEAQFRAWCELALRQRAES-------------ELTIR 49

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D      LN  YR  D  TNVLSFP      +     +LGD+V+   ++  EA    K
Sbjct: 50  LVDEAEGLELNSTYRHKDYATNVLSFPADVPE-EFLDIPLLGDLVICAPVVAREAREQHK 108

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             + H  HL+IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 109 PLQAHWAHLVIHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 159


>gi|300722330|ref|YP_003711615.1| putative metal-dependent hydrolase [Xenorhabdus nematophila ATCC
           19061]
 gi|297628832|emb|CBJ89410.1| putative metal-dependent hydrolase [Xenorhabdus nematophila ATCC
           19061]
          Length = 155

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQIA EN     E       E +F + +  ++ +     +   E+++   D  
Sbjct: 1   MSSVILDLQIACENPKGLPE-------EALFQRWLEGVLPQ----FQAESEVTIRLVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVL+FP  F S       +LGD+++  +++E EA    K  E H
Sbjct: 50  ESHDLNLTYRGKDKPTNVLTFP--FESPPEIELPLLGDLIICRQVVEKEAEEQQKTVEEH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH+D+ +A  ME LE  IL+ +G +DPY+++
Sbjct: 108 WAHMVVHGSLHLLGYDHIDNDEAEEMEFLETEILKKMGYSDPYQIE 153


>gi|290476184|ref|YP_003469084.1| putative metal-dependent hydrolase [Xenorhabdus bovienii SS-2004]
 gi|289175517|emb|CBJ82320.1| putative metal-dependent hydrolase [Xenorhabdus bovienii SS-2004]
          Length = 155

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 87/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           +N   LDLQIA EN     DE   +   E +  +             +   E+++   D 
Sbjct: 1   MNSVILDLQIACENPEGLPDEALFQRWLESILPQ------------FQAESEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAEEQQKTVEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H++IHG LHLLGYDH++D +A  ME LE  IL+ +G  DPY  +
Sbjct: 107 HWAHMVIHGSLHLLGYDHIEDDEAEEMESLETEILQKMGYADPYLAE 153


>gi|294142166|ref|YP_003558144.1| hypothetical protein SVI_3395 [Shewanella violacea DSS12]
 gi|293328635|dbj|BAJ03366.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 158

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/170 (37%), Positives = 87/170 (51%), Gaps = 15/170 (8%)

Query: 1   MSVKKVNLP-RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSL 59
           MS+   NL   LDLQIA++N                    ++              EL++
Sbjct: 1   MSLNHKNLELELDLQIAIDNKSLPSREDFELWVHSALRDTMTQ------------AELTI 48

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
              D    +TLN  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    
Sbjct: 49  RIVDKAESQTLNSSYRGKDKPTNVLSFP--FEAPPEIDIPLLGDLVICAPVVEFEAKQQN 106

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           K  + H  H+++HG LHLLGYDH+ D +A  ME LE  ++E LG N+PY+
Sbjct: 107 KSLKAHWAHMVVHGCLHLLGYDHIQDAEAEEMESLETQLIEKLGFNNPYK 156


>gi|114561894|ref|YP_749407.1| putative metalloprotease [Shewanella frigidimarina NCIMB 400]
 gi|122300720|sp|Q087J6|RRMF_SHEFN RecName: Full=Probable rRNA maturation factor
 gi|114333187|gb|ABI70569.1| protein of unknown function UPF0054 [Shewanella frigidimarina NCIMB
           400]
          Length = 156

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 15/169 (8%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           MS + ++L  LDLQIAV+N     +    T       +             + +VEL++ 
Sbjct: 1   MSQQGISL-DLDLQIAVDNPRLPTQAEFETWVRAAIGQT------------KPVVELTIR 47

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D    + LN  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K
Sbjct: 48  IVDIAESQQLNSTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLVICAPVVEQEAIEQNK 105

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               H  H++IHG LHLLGYDH+ D++A  ME LE  ++E LG ++PY+
Sbjct: 106 PLIAHWAHMVIHGSLHLLGYDHIIDEEADEMESLETQLVEGLGFDNPYK 154


>gi|303250397|ref|ZP_07336595.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252249|ref|ZP_07534146.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|302650723|gb|EFL80881.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860171|gb|EFM92187.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 163

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++ +         E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|320539650|ref|ZP_08039314.1| putative conserved protein [Serratia symbiotica str. Tucson]
 gi|320030262|gb|EFW12277.1| putative conserved protein [Serratia symbiotica str. Tucson]
          Length = 157

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA E++    DE   +   E V                +   E+++   D 
Sbjct: 1   MSQVILDLQIACEDSNNLPDETAFQRWLEAVL------------LQFQEEAEVTVRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G +  +LGD+++  +++E EA   GK  E 
Sbjct: 49  AESNELNLTYRGKDKPTNVLSFP--FEAPPGIALPLLGDLIICRQVVEQEAAEQGKTSEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D  A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDAAEEMESLETEIMHGLGYPDPYLAE 153


>gi|261341272|ref|ZP_05969130.1| putative metalloprotease [Enterobacter cancerogenus ATCC 35316]
 gi|288316577|gb|EFC55515.1| putative metalloprotease [Enterobacter cancerogenus ATCC 35316]
          Length = 155

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   DE   +T  + V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACEDNSGMPDEAQFQTWLDAVIPQ------------FQEESEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  + 
Sbjct: 49  AESHELNLTYRGKDKPTNVLSFP--FEAPPGMEMPLLGDLIICRQVVEQEAKEQQKPLDA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH+DD +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLALGYEDPYIAE 153


>gi|163752488|ref|ZP_02159677.1| hypothetical protein KT99_21054 [Shewanella benthica KT99]
 gi|161327632|gb|EDP98827.1| hypothetical protein KT99_21054 [Shewanella benthica KT99]
          Length = 158

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 62/170 (36%), Positives = 89/170 (52%), Gaps = 15/170 (8%)

Query: 1   MSVKKVNLP-RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSL 59
           MS+   NL   LDLQ+A +N     +        +     +            N  EL++
Sbjct: 1   MSLNHNNLELDLDLQVATDNERLPSQEDFELWVRIALRDTM------------NQAELTI 48

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
              D    +TLN  YRG DKPTNVLSFP  F +       +LGD+++   ++E EA    
Sbjct: 49  RIVDEAESQTLNSSYRGKDKPTNVLSFP--FEAPPEIDIPLLGDLIICAPVVEFEAKQQN 106

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           K  ++H  H+++HG LHLLGYDH+ D +A  ME LE  ++E LG N+PY+
Sbjct: 107 KSLQSHWAHMVVHGCLHLLGYDHIQDAEAEEMESLETQLIESLGFNNPYK 156


>gi|304395672|ref|ZP_07377555.1| protein of unknown function UPF0054 [Pantoea sp. aB]
 gi|304356966|gb|EFM21330.1| protein of unknown function UPF0054 [Pantoea sp. aB]
          Length = 157

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 13/163 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A EN     +       E +F + +S  ++      +   E+++   D  
Sbjct: 1   MSEVILDLQVACENTANLPD-------ESLFHRWLSAAVTP----FQPESEVTVRLVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H
Sbjct: 50  ESHELNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQGKSVEAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             H+++HG LHLLGYDH++D +A  MEGLE  I+  LG  DPY
Sbjct: 108 WAHMVVHGTLHLLGYDHIEDDEADEMEGLETEIMLALGYPDPY 150


>gi|226331002|ref|ZP_03806520.1| hypothetical protein PROPEN_04932 [Proteus penneri ATCC 35198]
 gi|225201797|gb|EEG84151.1| hypothetical protein PROPEN_04932 [Proteus penneri ATCC 35198]
          Length = 155

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN      E    T  E V  +             + + E+++   D 
Sbjct: 1   MSEVILDLQVASENTQGLPTEAQFMTWLEAVLPQ------------FQPVSEVTIRIVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHELNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEKEATEQSKTVEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H++IHG LHLLGYDH++D +A  MEGLE  IL++LG  DPY ++
Sbjct: 107 HWAHMVIHGCLHLLGYDHIEDDEAEEMEGLETEILQNLGYADPYLIE 153


>gi|167550793|ref|ZP_02344549.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168465846|ref|ZP_02699728.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195631609|gb|EDX50129.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|205324293|gb|EDZ12132.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 157

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           +N   LDLQ+A EN A   DE   +   + V  +             +   E+++   D 
Sbjct: 1   MNQVILDLQLACENHAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 153


>gi|308050554|ref|YP_003914120.1| hypothetical protein Fbal_2844 [Ferrimonas balearica DSM 9799]
 gi|307632744|gb|ADN77046.1| protein of unknown function UPF0054 [Ferrimonas balearica DSM 9799]
          Length = 148

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE      +  L +   +  A                  EL++  TD    + 
Sbjct: 2   ELDLQLAVEADNLPSQAQLESWAALALA-------------DRPDAELTIRITDEAESQQ 48

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+   ++  EA    K   +H  H+
Sbjct: 49  LNRDYRGKDKPTNVLSFP--FEAPPGIELPLLGDLVICAAVVAREAVEQEKAPMDHWAHM 106

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +IHG LHL+GYDH+DD+DA  ME LER +L  LGI DPY+
Sbjct: 107 VIHGCLHLIGYDHIDDEDAEEMESLERQLLAQLGIADPYQ 146


>gi|260461991|ref|ZP_05810236.1| protein of unknown function UPF0054 [Mesorhizobium opportunistum
           WSM2075]
 gi|259032238|gb|EEW33504.1| protein of unknown function UPF0054 [Mesorhizobium opportunistum
           WSM2075]
          Length = 166

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/159 (45%), Positives = 92/159 (57%), Gaps = 6/159 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ I++E   W  E  L  L +   A A +   + G        ELS+VF+D   I TL
Sbjct: 14  VEIDISIEAGDWPAEASLARLVDRAVAVAFAETGAAGQ------SELSIVFSDDAHIRTL 67

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++RG DKPTNVLSFP      DG    MLGDIVLA E +  EA +  K  ENH+ HL+
Sbjct: 68  NADWRGKDKPTNVLSFPAFPHVKDGPLPPMLGDIVLAAETVAREAALEDKPLENHITHLV 127

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           IHG LHL+GYDH  D +A  ME +ER+ L  L I DPY 
Sbjct: 128 IHGLLHLMGYDHETDTEAEAMEAVERAALARLAIPDPYA 166


>gi|218508193|ref|ZP_03506071.1| hypothetical protein RetlB5_11662 [Rhizobium etli Brasil 5]
          Length = 156

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 1/148 (0%)

Query: 23  GDEIHLRTLCEVVF-AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
            +E  L   C  V  A AV    S+         E+SLVFTD   I+ +N E+RG DK T
Sbjct: 1   PEEETLLAFCGRVLGAAAVYLRDSEKQPFPTMPPEVSLVFTDDASIQDINAEWRGKDKAT 60

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           NVLSFP            MLGDI++A E +E EA+ L K F++HL HL++HGFLHLLGYD
Sbjct: 61  NVLSFPAFPVQPGKMPGPMLGDIIIARETVEREAHELEKSFDDHLTHLLVHGFLHLLGYD 120

Query: 142 HVDDKDACVMEGLERSILEDLGINDPYE 169
           H++  +A +MEGLE  IL  LG++DPYE
Sbjct: 121 HMNSAEAEIMEGLETRILAQLGLSDPYE 148


>gi|37525277|ref|NP_928621.1| putative metalloprotease [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|46577360|sp|Q7N748|RRMF_PHOLL RecName: Full=Probable rRNA maturation factor
 gi|36784704|emb|CAE13604.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 155

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQIA E++    +  L             + +       ++  E+++   D  
Sbjct: 1   MSSVILDLQIACEHSQGLPKETL-----------FQHWLDGVLPQFQSESEVTIRIVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG +KPTNVLSFP  F +       +LGD+++  +++E EA    K  E H
Sbjct: 50  ESHDLNLTYRGKNKPTNVLSFP--FEAPPEIDLPLLGDLIICRQVVEKEAEEQQKTIEEH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I++ LG  DPY  +
Sbjct: 108 WAHMVVHGCLHLLGYDHIEDDEAEEMESLETEIMQKLGYADPYLAE 153


>gi|311280445|ref|YP_003942676.1| hypothetical protein Entcl_3146 [Enterobacter cloacae SCF1]
 gi|308749640|gb|ADO49392.1| protein of unknown function UPF0054 [Enterobacter cloacae SCF1]
          Length = 155

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A EN     E  L    E  F + +  +I +     +   E+++   D  
Sbjct: 1   MSAVILDLQLACEN-----EAGLPQ--EAQFQRWLDAVIPQ----FQEESEVTVRLVDDA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DK TNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H
Sbjct: 50  ESHELNLTYRGKDKSTNVLSFP--FEAPPGMEMPLLGDLIICRQVVEREAEEQGKPLEAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I+  LG +DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYDDPYIAE 153


>gi|56414203|ref|YP_151278.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197363127|ref|YP_002142764.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|62901210|sp|Q5PLS8|RRMF_SALPA RecName: Full=Probable rRNA maturation factor YbeY
 gi|238689934|sp|B5BCD3|RRMF_SALPK RecName: Full=Probable rRNA maturation factor YbeY
 gi|56128460|gb|AAV77966.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094604|emb|CAR60125.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 157

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN A   DE   +   + V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 153


>gi|296103384|ref|YP_003613530.1| putative metalloprotease [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057843|gb|ADF62581.1| putative metalloprotease [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295096598|emb|CBK85688.1| conserved hypothetical protein TIGR00043 [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 155

 Score =  190 bits (483), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +   + V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACEDNSGMPEEAQFQKWLDAVIPQ------------FQEESEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHELNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAKEQQKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYEDPYIAE 153


>gi|16759620|ref|NP_455237.1| metalloprotease [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|29142607|ref|NP_805949.1| metalloprotease [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|62179266|ref|YP_215683.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161615113|ref|YP_001589078.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168231684|ref|ZP_02656742.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168236656|ref|ZP_02661714.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168240518|ref|ZP_02665450.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168264398|ref|ZP_02686371.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168820206|ref|ZP_02832206.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443004|ref|YP_002039912.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448551|ref|YP_002044703.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194470785|ref|ZP_03076769.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194734762|ref|YP_002113779.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251252|ref|YP_002145645.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197262278|ref|ZP_03162352.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|200390340|ref|ZP_03216951.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204930535|ref|ZP_03221465.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213425076|ref|ZP_03357826.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213608001|ref|ZP_03368827.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647867|ref|ZP_03377920.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|224582503|ref|YP_002636301.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238911618|ref|ZP_04655455.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289825601|ref|ZP_06544787.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|26006915|sp|Q8Z8G6|RRMF_SALTI RecName: Full=Probable rRNA maturation factor YbeY
 gi|75484424|sp|Q57RQ9|RRMF_SALCH RecName: Full=Probable rRNA maturation factor YbeY
 gi|189041075|sp|A9MUI2|RRMF_SALPB RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704002|sp|B5EZB0|RRMF_SALA4 RecName: Full=Probable rRNA maturation factor YbeY
 gi|238690245|sp|B4TB72|RRMF_SALHS RecName: Full=Probable rRNA maturation factor YbeY
 gi|238693560|sp|B4SYM8|RRMF_SALNS RecName: Full=Probable rRNA maturation factor YbeY
 gi|238693645|sp|B4TPY8|RRMF_SALSV RecName: Full=Probable rRNA maturation factor YbeY
 gi|254807367|sp|C0PW97|RRMF_SALPC RecName: Full=Probable rRNA maturation factor YbeY
 gi|25331411|pir||AI0583 conserved hypothetical protein STY0714 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16501912|emb|CAD05139.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138238|gb|AAO69809.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62126899|gb|AAX64602.1| putative metal-dependent hydrolase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364477|gb|ABX68245.1| hypothetical protein SPAB_02880 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401667|gb|ACF61889.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406855|gb|ACF67074.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457149|gb|EDX45988.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194710264|gb|ACF89485.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197214955|gb|ACH52352.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197240533|gb|EDY23153.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197290423|gb|EDY29779.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|199602785|gb|EDZ01331.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204320469|gb|EDZ05672.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205334140|gb|EDZ20904.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205340341|gb|EDZ27105.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205343173|gb|EDZ29937.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347119|gb|EDZ33750.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|224467030|gb|ACN44860.1| hypothetical protein SPC_0685 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|320084941|emb|CBY94730.1| putative metalloprotease ybeY [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322613206|gb|EFY10149.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621274|gb|EFY18131.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623694|gb|EFY20532.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628966|gb|EFY25745.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631688|gb|EFY28442.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637576|gb|EFY34278.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641916|gb|EFY38546.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646760|gb|EFY43266.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651461|gb|EFY47841.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653088|gb|EFY49422.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658809|gb|EFY55064.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664922|gb|EFY61115.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668924|gb|EFY65076.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670570|gb|EFY66703.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675311|gb|EFY71387.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682218|gb|EFY78243.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684953|gb|EFY80950.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322713732|gb|EFZ05303.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323193989|gb|EFZ79191.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323197919|gb|EFZ83041.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202034|gb|EFZ87094.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207167|gb|EFZ92120.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210926|gb|EFZ95789.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214306|gb|EFZ99057.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219289|gb|EGA03780.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225500|gb|EGA09730.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231059|gb|EGA15175.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323234109|gb|EGA18198.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238196|gb|EGA22254.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242570|gb|EGA26594.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323248453|gb|EGA32387.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251332|gb|EGA35204.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323262139|gb|EGA45701.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264849|gb|EGA48350.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323272314|gb|EGA55721.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 157

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN A   DE   +   + V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 153


>gi|32033745|ref|ZP_00134040.1| COG0319: Predicted metal-dependent hydrolase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208174|ref|YP_001053399.1| putative metalloprotease [Actinobacillus pleuropneumoniae L20]
 gi|165976112|ref|YP_001651705.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190150005|ref|YP_001968530.1| hypothetical protein APP7_0736 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263336|ref|ZP_07544954.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
 gi|171855089|sp|A3N058|RRMF_ACTP2 RecName: Full=Probable rRNA maturation factor
 gi|238692332|sp|B3GXC9|RRMF_ACTP7 RecName: Full=Probable rRNA maturation factor
 gi|126096966|gb|ABN73794.1| hypothetical protein APL_0694 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|165876213|gb|ABY69261.1| hypothetical protein APJL_0692 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189915136|gb|ACE61388.1| hypothetical protein APP7_0736 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306871398|gb|EFN03124.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
          Length = 163

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++ +         E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESYELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|270263721|ref|ZP_06191990.1| putative metalloprotease YbeY [Serratia odorifera 4Rx13]
 gi|270042605|gb|EFA15700.1| putative metalloprotease YbeY [Serratia odorifera 4Rx13]
          Length = 157

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA  ++    DE   +   E V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQIACADSNGLPDEATFQRWLEGVLPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESNELNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAVEQDKALEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMHGLGYPDPYLAE 153


>gi|328545926|ref|YP_004306035.1| metalloprotease [polymorphum gilvum SL003B-26A1]
 gi|326415666|gb|ADZ72729.1| Putative metalloprotease [Polymorphum gilvum SL003B-26A1]
          Length = 178

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 72/164 (43%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
              L + +AVE   W D   L  L     A A  N   +         ELSLVF D   I
Sbjct: 13  PEDLQIDLAVEAGDWPDGARLEDLTRAAVAAAFRNAPLRTL----PGSELSLVFLDDDGI 68

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN  +R  DKPTNVLSF +   +  G    MLGDIVL+ + +  EA   G  F +H  
Sbjct: 69  RALNRSWRNKDKPTNVLSF-SGGDAVGGRYGPMLGDIVLSSDTLAREAKEQGISFCDHFS 127

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           HL++HG LHL GYDH  + +A +MEGLER IL DLGI DPY  D
Sbjct: 128 HLVVHGLLHLFGYDHQIEAEAEIMEGLERRILADLGIADPYAGD 171


>gi|262172030|ref|ZP_06039708.1| predicted metal-dependent hydrolase [Vibrio mimicus MB-451]
 gi|261893106|gb|EEY39092.1| predicted metal-dependent hydrolase [Vibrio mimicus MB-451]
          Length = 154

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     DE  L T  E  FA+ ++  I+      +   E+++   D      
Sbjct: 4   ELDLQLAVE-----DENGLPT--EADFAQWLTRTITP----FQPQAEVTIRIVDEEESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETKIMQEMGFTDPYLAE 152


>gi|307249902|ref|ZP_07531876.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|306858091|gb|EFM90173.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
          Length = 163

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++ +         E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLEQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWTHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|261822379|ref|YP_003260485.1| metalloprotease [Pectobacterium wasabiae WPP163]
 gi|261606392|gb|ACX88878.1| protein of unknown function UPF0054 [Pectobacterium wasabiae
           WPP163]
          Length = 159

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQIA E A    E       E  F + +  ++ +     + + E+++   D  
Sbjct: 1   MSQVILDLQIASEQAQGLPE-------EKDFQRWLEGVLPQ----FQEVSEVTIRIVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H
Sbjct: 50  ESRDLNNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEREAAEQEKTVEEH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYTDPYLAE 153


>gi|258621977|ref|ZP_05717006.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258627066|ref|ZP_05721862.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258580584|gb|EEW05537.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258585730|gb|EEW10450.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 154

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L T  E  FA+ ++  I+      +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----ENGLPT--EADFAQWLTRTITP----FQPQAEVTIRIVDEKESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|110834797|ref|YP_693656.1| hypothetical protein ABO_1936 [Alcanivorax borkumensis SK2]
 gi|123345401|sp|Q0VN64|RRMF_ALCBS RecName: Full=Probable rRNA maturation factor
 gi|110647908|emb|CAL17384.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 175

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 65/168 (38%), Positives = 87/168 (51%), Gaps = 13/168 (7%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           +  +  P +D+Q A +     DE HL   CE V   A++     G        +++L   
Sbjct: 1   MNGIPTPTVDIQWASDAPDAPDETHL---CEWVRHAAIAAGGVVG--------DITLRIV 49

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           D   I TLN +YR  D PTNVLSFP        +G    ++GDI++   ++  EAN   K
Sbjct: 50  DEEEIRTLNRDYRDKDAPTNVLSFPFEMPEGLPEGAMDPLVGDIIICAAVVRREANEQHK 109

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               H  H++ HG LHLLGYDH+DD DA VME LE   L +LG  DPY
Sbjct: 110 PLVAHWAHMVTHGVLHLLGYDHIDDDDAIVMETLEIRALGELGFPDPY 157


>gi|157369460|ref|YP_001477449.1| hypothetical protein Spro_1217 [Serratia proteamaculans 568]
 gi|166977828|sp|A8GB31|RRMF_SERP5 RecName: Full=Probable rRNA maturation factor
 gi|157321224|gb|ABV40321.1| protein of unknown function UPF0054 [Serratia proteamaculans 568]
          Length = 157

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A  +N+   DE   +   E V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACADNSGLPDEATFQRWLEGVLPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG+DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESNELNLTYRGMDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEREAAEQDKALEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMHGLGYPDPYLAE 153


>gi|322514461|ref|ZP_08067501.1| metal-dependent hydrolase [Actinobacillus ureae ATCC 25976]
 gi|322119624|gb|EFX91692.1| metal-dependent hydrolase [Actinobacillus ureae ATCC 25976]
          Length = 163

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++ K         E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLEQ--FTQWVQRALAHKAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+++   ++E EA       E+
Sbjct: 54  AESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRHVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|291616692|ref|YP_003519434.1| YbeY [Pantoea ananatis LMG 20103]
 gi|291151722|gb|ADD76306.1| YbeY [Pantoea ananatis LMG 20103]
 gi|327393117|dbj|BAK10539.1| hypothetical UPF0054 protein YbeY [Pantoea ananatis AJ13355]
          Length = 157

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 13/163 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A E        +L T  E  F + +   ++      +   E+++   D  
Sbjct: 1   MSDVILDLQLACEQTD-----NLPT--ESQFQRWLEAAVTP----FQPESEVTIRLVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H
Sbjct: 50  ESHELNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAQEQGKTPEAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             H++IHG LHLLGYDH++D +A  MEG+E  I+  LG  DPY
Sbjct: 108 WAHMVIHGTLHLLGYDHIEDSEAEEMEGIETEIMLALGYPDPY 150


>gi|308186035|ref|YP_003930166.1| metalloprotease [Pantoea vagans C9-1]
 gi|308056545|gb|ADO08717.1| Putative metalloprotease [Pantoea vagans C9-1]
          Length = 157

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/164 (38%), Positives = 87/164 (53%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A +N A   DE                  +S      +   E+++   D 
Sbjct: 1   MSEVILDLQVACDNTADLPDEGQF------------HRWLSAAVTPFQPESEVTVRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E 
Sbjct: 49  AESHELNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQGKSVEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH++D +A  MEGLE  I+  LG  DPY
Sbjct: 107 HWAHMVVHGTLHLLGYDHIEDDEADEMEGLETEIMLALGYPDPY 150


>gi|312882699|ref|ZP_07742436.1| putative metalloprotease [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369660|gb|EFP97175.1| putative metalloprotease [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 154

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIAVEN        L T  +++        +       +   E+++   D    + L
Sbjct: 5   LDLQIAVENDK-----DLPTYEDILL------WLDSTLAKFKPQAEVTVRVVDEPESQEL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K   +H  H++
Sbjct: 54  NHDYRGKDKPTNVLSFP--FEAPPGIDIDLLGDLVICKQVVEREAIEQNKPLISHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D++A  ME LE  I++ +G +DPY  +
Sbjct: 112 VHGCLHLLGYDHIEDQEAEEMESLETEIMKSMGYSDPYITE 152


>gi|212712960|ref|ZP_03321088.1| hypothetical protein PROVALCAL_04058 [Providencia alcalifaciens DSM
           30120]
 gi|212684438|gb|EEB43966.1| hypothetical protein PROVALCAL_04058 [Providencia alcalifaciens DSM
           30120]
          Length = 155

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 87/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA EN A    E   +     V  K             +   E+++   D 
Sbjct: 1   MSDVILDLQIASENTAGLPTEAMFQRWVNAVLPK------------FQAESEVTIRVVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHELNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAAEQQKSEEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  MEGLE  IL ++G  DPY  +
Sbjct: 107 HWAHMVVHGCLHLLGYDHIEDDEAEEMEGLETEILAEMGYADPYLAE 153


>gi|307245551|ref|ZP_07527638.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|307254505|ref|ZP_07536341.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307258964|ref|ZP_07540695.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|306853610|gb|EFM85828.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|306862555|gb|EFM94513.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306866988|gb|EFM98845.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
          Length = 163

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 64/164 (39%), Positives = 91/164 (55%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++ +         E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DK TNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESHELNLTYRGKDKSTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDAEAEEMEGLETEIMQSLGFEDPY 155


>gi|161504168|ref|YP_001571280.1| putative metalloprotease [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189041074|sp|A9MKB9|RRMF_SALAR RecName: Full=Probable rRNA maturation factor YbeY
 gi|160865515|gb|ABX22138.1| hypothetical protein SARI_02274 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 155

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN +   DE   +   + V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACENHSGLPDEAQFQRWLDGVIPQ------------FQEASEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQDKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 153


>gi|271499715|ref|YP_003332740.1| hypothetical protein Dd586_1151 [Dickeya dadantii Ech586]
 gi|270343270|gb|ACZ76035.1| protein of unknown function UPF0054 [Dickeya dadantii Ech586]
          Length = 161

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVENA-LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA EN+     E   +   E V  +             ++  E+++   D 
Sbjct: 1   MSQVILDLQIASENSHGLPSEADFQRWLEAVLPQ------------FQDEAEVTIRVVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA   GK  E 
Sbjct: 49  EESHHLNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAVEQGKSEEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPYLAE 153


>gi|227327388|ref|ZP_03831412.1| putative metalloprotease [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 159

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQIA E A    E       E  F + +  ++ +     + + E+++   D  
Sbjct: 1   MSQVILDLQIASEQAQGLPE-------EKDFQRWLEGVLPQ----FQEVSEVTIRIVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H
Sbjct: 50  ESRDLNNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEREAAEQEKTVEEH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDSEAEEMEALETEIMQGMGYADPYLAE 153


>gi|171473045|sp|A6V0C7|RRMF_PSEA7 RecName: Full=Probable rRNA maturation factor
          Length = 160

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 80/162 (49%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A + A    E   R  CE+   +   +             EL++   D      
Sbjct: 4   ELDLQVASDAADLPSEAQFRAWCELALRQRAES-------------ELTIRLVDEAEGLE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSFP      +     +LGD+V+   ++  EA    K  + H  HL
Sbjct: 51  LNSTYRHKDYATNVLSFPADVPE-EFLDIPLLGDLVICAPVVAREAREQHKPLQAHWAHL 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 110 VIHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 151


>gi|198244509|ref|YP_002214657.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205351953|ref|YP_002225754.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207856133|ref|YP_002242784.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|226704003|sp|B5FNB0|RRMF_SALDC RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704004|sp|B5QWB9|RRMF_SALEP RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704005|sp|B5R815|RRMF_SALG2 RecName: Full=Probable rRNA maturation factor YbeY
 gi|197939025|gb|ACH76358.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205271734|emb|CAR36568.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206707936|emb|CAR32225.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326622412|gb|EGE28757.1| Putative metalloprotease ybeY [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326626992|gb|EGE33335.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 157

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN A   DE   +   + V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  TESHDLNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 153


>gi|303252387|ref|ZP_07338553.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247668|ref|ZP_07529709.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|302648846|gb|EFL79036.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855836|gb|EFM87998.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
          Length = 163

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++ +         E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESYELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDVEAEEMEGLETEIMQSLGFEDPY 155


>gi|50120256|ref|YP_049423.1| putative metalloprotease [Pectobacterium atrosepticum SCRI1043]
 gi|59799108|sp|Q6D7K8|RRMF_ERWCT RecName: Full=Probable rRNA maturation factor
 gi|49610782|emb|CAG74227.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 159

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQIA E A    E       E  F + +  ++ +     + + E+++   D  
Sbjct: 1   MSQVILDLQIASEQAQGLPE-------EKDFQRWLEGVLPQ----FQEVSEVTIRIVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H
Sbjct: 50  ESRDLNNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEREAVEQEKTVEEH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPYLAE 153


>gi|16764045|ref|NP_459660.1| metalloprotease [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167990678|ref|ZP_02571778.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|17865774|sp|O87574|RRMF_SALTY RecName: Full=Probable rRNA maturation factor YbeY
 gi|16419182|gb|AAL19619.1| putative metal-dependent hydrolase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|205330884|gb|EDZ17648.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261245940|emb|CBG23742.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992404|gb|ACY87289.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157268|emb|CBW16756.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911700|dbj|BAJ35674.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321226248|gb|EFX51299.1| metal-dependent hydrolase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323128985|gb|ADX16415.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332987612|gb|AEF06595.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 157

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN A   DE   +   + V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPAGIEMPLLGDLIICRQVVEQEAQEQSKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 153


>gi|197284345|ref|YP_002150217.1| metalloprotease [Proteus mirabilis HI4320]
 gi|227358511|ref|ZP_03842836.1| metal-dependent hydrolase [Proteus mirabilis ATCC 29906]
 gi|238693170|sp|B4EV26|RRMF_PROMH RecName: Full=Probable rRNA maturation factor
 gi|194681832|emb|CAR41113.1| conserved hypothetical protein [Proteus mirabilis HI4320]
 gi|227161222|gb|EEI46296.1| metal-dependent hydrolase [Proteus mirabilis ATCC 29906]
          Length = 155

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN      E    T  E V  +             + I E+++   D 
Sbjct: 1   MSEVILDLQVATENTQGLPSEAQFITWLEAVLPQ------------FQPISEVTIRIVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG D+PTNVLSFP  F +       +LGD+++  +++E EA+   K  E 
Sbjct: 49  AESHELNLTYRGKDRPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEKEADEQNKTVEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H++IHG LHLLGYDH++D +A  MEGLE  IL+ LG  DPY ++
Sbjct: 107 HWAHMVIHGCLHLLGYDHIEDDEAEEMEGLETEILQKLGYEDPYLIE 153


>gi|156934830|ref|YP_001438746.1| putative metalloprotease [Cronobacter sakazakii ATCC BAA-894]
 gi|166228427|sp|A7MQS7|RRMF_ENTS8 RecName: Full=Probable rRNA maturation factor
 gi|156533084|gb|ABU77910.1| hypothetical protein ESA_02677 [Cronobacter sakazakii ATCC BAA-894]
          Length = 155

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVENA-LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E+     DE   +T    V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQVACEDTTGLPDEAQFQTWLNAVVPQ------------FQEESEVTVRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG+DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGMDKPTNVLSFP--FEAPPGIDMPLLGDLIICRQVVEREAREQEKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  MEG+E  I+  LG +DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEGIETEIMLALGFDDPYIAE 153


>gi|260597075|ref|YP_003209646.1| metal-binding heat shock protein [Cronobacter turicensis z3032]
 gi|260216252|emb|CBA29173.1| Putative metalloprotease ESA_02677 [Cronobacter turicensis z3032]
          Length = 155

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E+ +   DE   +T    V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQVACEDTSGLPDEAQFQTWLNAVVPQ------------FQEESEVTVRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG+DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    
Sbjct: 49  AESHDLNLTYRGMDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEREAREQEKPLAA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  MEG+E  I+  LG +DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEGIETEIMLALGFDDPYIAE 153


>gi|183598129|ref|ZP_02959622.1| hypothetical protein PROSTU_01494 [Providencia stuartii ATCC 25827]
 gi|188020288|gb|EDU58328.1| hypothetical protein PROSTU_01494 [Providencia stuartii ATCC 25827]
          Length = 155

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E      DE   +   E V  K             +   E+++   D 
Sbjct: 1   MSEVILDLQLACEETTGLPDEALFQRWLEAVLPK------------FQPQSEVTIRIVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E 
Sbjct: 49  EESHHLNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAIEQQKSAEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  IL +LG  DPY  +
Sbjct: 107 HWAHMVVHGCLHLLGYDHIEDDEAEEMESLETEILAELGYADPYLAE 153


>gi|242238552|ref|YP_002986733.1| metalloprotease [Dickeya dadantii Ech703]
 gi|242130609|gb|ACS84911.1| protein of unknown function UPF0054 [Dickeya dadantii Ech703]
          Length = 161

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA  N      E   +   E V  +             + + E+++   D 
Sbjct: 1   MSQVILDLQIACANQDGLPAESTFQRWLEAVLPQ------------FQEVAEVTVRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E 
Sbjct: 49  EESHHLNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAAEQEKTTEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY
Sbjct: 107 HWAHMVVHGCLHLLGYDHIEDSEAEEMEALETEIMQGMGYADPY 150


>gi|262402696|ref|ZP_06079257.1| predicted metal-dependent hydrolase [Vibrio sp. RC586]
 gi|262351478|gb|EEZ00611.1| predicted metal-dependent hydrolase [Vibrio sp. RC586]
          Length = 154

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L T  E  FA+ ++  I+      +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----ENGLPT--EADFAQWLTRTITP----FQPQAEVTIRIVDEKESHM 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|253687589|ref|YP_003016779.1| hypothetical protein PC1_1195 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259645749|sp|C6DBX6|RRMF_PECCP RecName: Full=Probable rRNA maturation factor
 gi|251754167|gb|ACT12243.1| protein of unknown function UPF0054 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 159

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQIA E A    E       E  F + +  ++ +     + + E+++   D  
Sbjct: 1   MSQVILDLQIASEQAQGLPE-------EKDFQRWLEGVLPQ----FQEVSEVTIRIVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H
Sbjct: 50  ESRDLNNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAAEQEKTVEEH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPYLAE 153


>gi|188534466|ref|YP_001908263.1| Conserved hypothetical protein (UPF0054) [Erwinia tasmaniensis
           Et1/99]
 gi|238689711|sp|B2VBL6|RRMF_ERWT9 RecName: Full=Probable rRNA maturation factor
 gi|188029508|emb|CAO97385.1| Conserved hypothetical protein (UPF0054) [Erwinia tasmaniensis
           Et1/99]
          Length = 155

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/159 (38%), Positives = 83/159 (52%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A EN      E   +   E V  +             +   E+++   D      
Sbjct: 6   LDLQLACENEQGLPAETDFQRWLEAVLPQ------------FQPESEVTIRLVDEAESRE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H  H+
Sbjct: 54  LNHTYRSKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAVEQGKTREAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +IHG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 112 VIHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYPDPY 150


>gi|163867520|ref|YP_001608719.1| hypothetical protein Btr_0248 [Bartonella tribocorum CIP 105476]
 gi|189039700|sp|A9IMW1|RRMF_BART1 RecName: Full=Probable rRNA maturation factor
 gi|161017166|emb|CAK00724.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 163

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/156 (42%), Positives = 93/156 (59%), Gaps = 5/156 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I V++A W DE  L  + E     A+ ++  +       + E+SL+FTD   +  +N 
Sbjct: 4   IDIMVKDAGWNDEKMLYNITEKALTTAMHHVSLENV-----VSEISLLFTDDEHMAKINA 58

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++RG +K TNVLSFP     +      MLGDI++A E + +EA   GK F++HL H+I+H
Sbjct: 59  QWRGKNKSTNVLSFPAFPIKAGNPPGPMLGDIIIARETVVLEAEKQGKTFQDHLTHMIVH 118

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LHLLGYDH  D +A  ME LER IL+ L I DPY
Sbjct: 119 GILHLLGYDHETDDEAHQMEKLEREILQKLSIKDPY 154


>gi|91792174|ref|YP_561825.1| putative metalloprotease [Shewanella denitrificans OS217]
 gi|123061206|sp|Q12R24|RRMF_SHEDO RecName: Full=Probable rRNA maturation factor
 gi|91714176|gb|ABE54102.1| protein of unknown function UPF0054 [Shewanella denitrificans
           OS217]
          Length = 153

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 14/160 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIAV++     +    T         +            +  EL++   +    ++
Sbjct: 6   DLDLQIAVDSNQLPSQADFETWVRTALGNTL------------DTAELTIRLVEIAESQS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+   ++E EA    K  + H  H+
Sbjct: 54  LNHDYRGKDKPTNVLSFP--FEAPPGMELPLLGDLVICVAVVEQEALEQNKPLQAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +IHG LHLLGYDH+ D++A  ME LE  ++E LG ++PY+
Sbjct: 112 VIHGCLHLLGYDHIIDQEAEEMESLETQLIEGLGFSNPYK 151


>gi|147673894|ref|YP_001216433.1| putative metalloprotease [Vibrio cholerae O395]
 gi|153827447|ref|ZP_01980114.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153831226|ref|ZP_01983893.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|183179697|ref|ZP_02957908.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|262168626|ref|ZP_06036321.1| predicted metal-dependent hydrolase [Vibrio cholerae RC27]
 gi|172047421|sp|A5F2X4|RRMF_VIBC3 RecName: Full=Probable rRNA maturation factor
 gi|146315777|gb|ABQ20316.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148873296|gb|EDL71431.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149738624|gb|EDM52977.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|183013108|gb|EDT88408.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|227012777|gb|ACP08987.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|262022744|gb|EEY41450.1| predicted metal-dependent hydrolase [Vibrio cholerae RC27]
          Length = 154

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          +S+     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLSRTITPFQPQAEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|251790530|ref|YP_003005251.1| putative metalloprotease [Dickeya zeae Ech1591]
 gi|247539151|gb|ACT07772.1| protein of unknown function UPF0054 [Dickeya zeae Ech1591]
          Length = 161

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA E +L    E   +   E V  +             + + E+++   D 
Sbjct: 1   MSQVILDLQIASEQSLGLPSEADFQRWLEAVLPQ------------FQEVAEVTIRVVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA   GK  E 
Sbjct: 49  EESHHLNLTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAVEQGKSTEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPYLAE 153


>gi|307256716|ref|ZP_07538495.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|307261160|ref|ZP_07542836.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|306864764|gb|EFM96668.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|306869142|gb|EFN00943.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
          Length = 163

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/164 (39%), Positives = 91/164 (55%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F + V   ++ +         E+++   D 
Sbjct: 1   MTTPIIDLQIAAENSE-----NLPSLAQ--FTQWVQRALAHEAQTEDFPETEITIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DK TNVLSFP  F   +G    +LGD+++  +++E EA       E+
Sbjct: 54  AESHELNLTYRGKDKSTNVLSFP--FEVPEGIELPLLGDLIICRQVVEKEAQEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D +A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDVEAEEMEGLETEIMQSLGFEDPY 155


>gi|319786434|ref|YP_004145909.1| hypothetical protein Psesu_0825 [Pseudoxanthomonas suwonensis 11-1]
 gi|317464946|gb|ADV26678.1| protein of unknown function UPF0054 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 163

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 2/142 (1%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
             V  A++    ++     +    +L++   D+   + LN  YRG D  TNVLSFP    
Sbjct: 19  AGVPAAQSFRKWVAAALAGRIREADLAIRIVDAPEGQALNRHYRGKDYATNVLSFPAEMP 78

Query: 92  S--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                G    +LGD+V+   ++  EA   GK    H  HL +HG LHLLG+DH DDK+A 
Sbjct: 79  EGLPKGIKFPLLGDLVICAPVVAREAAEQGKPLAAHYAHLTVHGTLHLLGWDHEDDKEAE 138

Query: 150 VMEGLERSILEDLGINDPYEVD 171
            ME LER IL  LG+ DPY  +
Sbjct: 139 AMEQLEREILAGLGLPDPYAAE 160


>gi|120555651|ref|YP_960002.1| hypothetical protein Maqu_2740 [Marinobacter aquaeolei VT8]
 gi|145572774|sp|A1U496|RRMF_MARAV RecName: Full=Probable rRNA maturation factor
 gi|120325500|gb|ABM19815.1| protein of unknown function UPF0054 [Marinobacter aquaeolei VT8]
          Length = 157

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 15/166 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   +DLQ+A +      +       E  +               EN  E+++   D+ 
Sbjct: 1   MSKVTVDLQMAFDGTGVPSKTLFEAWAEAAWQ-------------GENPTEVTIRIVDND 47

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN +YRG DKPTNVLSFP  F +  G +  + GD+V+   ++E EA    K+   H
Sbjct: 48  ESRELNHQYRGKDKPTNVLSFP--FEAPAGITVPLAGDLVICAPVVEQEAREQNKDAVAH 105

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHL GYDH++  +A VME LE  +L  LG  +PYE +
Sbjct: 106 WAHMVVHGMLHLQGYDHIEVNEAEVMEALEIRLLAQLGFANPYEAE 151


>gi|226943046|ref|YP_002798119.1| putative metalloprotease [Azotobacter vinelandii DJ]
 gi|259710170|sp|C1DMW4|RRMF_AZOVD RecName: Full=Probable rRNA maturation factor
 gi|226717973|gb|ACO77144.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 162

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 82/162 (50%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A    L   E   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVASVRPL-PAEDDFRRWCELALRQRSAD------------SELTIRLVDEEEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D PTNVLSFP            +LGD+V+   ++E EA    K  + H  HL
Sbjct: 50  LNRTWRHKDYPTNVLSFPAEVPEG-LLDIPLLGDLVICVPVVEREAAEQDKAADAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D +A  ME LER +L +LG  DPY+ D
Sbjct: 109 VIHGCLHLLGYDHIEDAEAEEMESLERDLLAELGYPDPYDGD 150


>gi|159184274|ref|NP_353390.2| hypothetical protein Atu0358 [Agrobacterium tumefaciens str. C58]
 gi|26006905|sp|Q8UID9|RRMF_AGRT5 RecName: Full=Probable rRNA maturation factor
 gi|159139601|gb|AAK86175.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 168

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 78/160 (48%), Positives = 96/160 (60%), Gaps = 1/160 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE   W  E +L      V   AV  L   +     +  VELSLVFTD   I  
Sbjct: 4   LDIQISVEAEGWSSEENLAAFATKVLNAAVDFLKREEEQPFPKMPVELSLVFTDDENIRE 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+R  DK TNVLSFP       G    MLGDIV+A E +E EA  L K FE+HL HL
Sbjct: 64  INAEWRDKDKATNVLSFPAFPLEPGGMPGPMLGDIVIARETVEREALELDKSFEDHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HGFLHL GYDH+D+++A  ME LE  IL  LG++DPY 
Sbjct: 124 LVHGFLHLFGYDHMDEEEAEEMESLETRILAVLGLSDPYA 163


>gi|262165202|ref|ZP_06032939.1| predicted metal-dependent hydrolase [Vibrio mimicus VM223]
 gi|262024918|gb|EEY43586.1| predicted metal-dependent hydrolase [Vibrio mimicus VM223]
          Length = 154

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     DE  L T  E  FA+ ++  I+      +   E+++   D      
Sbjct: 4   ELDLQLAVE-----DENGLPT--EADFAQWLTRTITP----FQPQAEVTIRIVDEEESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEHEAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|254361290|ref|ZP_04977433.1| possible metal-dependent hydrolase [Mannheimia haemolytica PHL213]
 gi|261493920|ref|ZP_05990429.1| putative metal-dependent hydrolase [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496864|ref|ZP_05993233.1| putative metal-dependent hydrolase [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|153092786|gb|EDN73829.1| possible metal-dependent hydrolase [Mannheimia haemolytica PHL213]
 gi|261307481|gb|EEY08815.1| putative metal-dependent hydrolase [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261310423|gb|EEY11617.1| putative metal-dependent hydrolase [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 160

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 84/159 (52%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +DLQIA EN      E    T  +   A        +         E+++   D      
Sbjct: 6   IDLQIACENTENLPSEQQFYTWVQKALA-------VEAKTDDFPESEITIRIVDEAESHE 58

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F + +G    +LGD+V+  +++E EA   G   E+H  HL
Sbjct: 59  LNLTYRGKDKPTNVLSFP--FEAPEGIEMPLLGDLVICRQVMEKEAEEQGISAESHWAHL 116

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            IHG LHLLGYDH+++ +A  ME LE  I++ LG  DPY
Sbjct: 117 AIHGTLHLLGYDHIEEDEAVEMESLETEIMQSLGYEDPY 155


>gi|283834042|ref|ZP_06353783.1| putative metalloprotease YbeY [Citrobacter youngae ATCC 29220]
 gi|291070183|gb|EFE08292.1| putative metalloprotease YbeY [Citrobacter youngae ATCC 29220]
          Length = 157

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A E     DE  L T  E  F   +  +I +     +   E+++   D  
Sbjct: 1   MSQVILDLQLACE-----DESGLPT--ESQFQGWLDAVIPQ----FQEESEVTIRLVDDA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DK TNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H
Sbjct: 50  ESHELNLTYRGKDKSTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEKEAQEQGKPLEAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYEDPYIAE 153


>gi|52425735|ref|YP_088872.1| putative metalloprotease [Mannheimia succiniciproducens MBEL55E]
 gi|59799096|sp|Q65RX3|RRMF_MANSM RecName: Full=Probable rRNA maturation factor
 gi|52307787|gb|AAU38287.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 156

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +    +DLQIA E     D+ +L TL +  F    +N +   +F      E+++   D  
Sbjct: 2   MKTVTIDLQIASE-----DQSNLPTLEQ--FTLWATNAVRAEHFEP----EITIRIVDEA 50

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LNF YRG D+PTNVLSFP  F   +     +LGD+V+  +++E EA   GK    H
Sbjct: 51  ESHELNFTYRGKDRPTNVLSFP--FECPEEVELPLLGDLVICRQVVEREAQEQGKPLTAH 108

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  D
Sbjct: 109 WAHMVVHGSLHLLGYDHIEDDEAVEMESLETEIMTGLGFEDPYSYD 154


>gi|297581339|ref|ZP_06943263.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534655|gb|EFH73492.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 154

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          +S+     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLSRTITPFQPQAEVTIRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++D+G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQDMGFTDPYLAE 152


>gi|121729827|ref|ZP_01682260.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229512947|ref|ZP_04402413.1| hypothetical protein VCB_000590 [Vibrio cholerae TMA 21]
 gi|121628431|gb|EAX60925.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229349840|gb|EEO14794.1| hypothetical protein VCB_000590 [Vibrio cholerae TMA 21]
          Length = 154

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          +++     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLTRTITPFQPQAEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|85058787|ref|YP_454489.1| hypothetical protein SG0809 [Sodalis glossinidius str. 'morsitans']
 gi|123519813|sp|Q2NUU1|RRMF_SODGM RecName: Full=Probable rRNA maturation factor
 gi|84779307|dbj|BAE74084.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 156

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A + A            E  F + +  ++     +  +  E+++   D  
Sbjct: 1   MSDVILDLQLACDEARGLP-------AEADFLRWLQGVLP----LFRDCAEVTVRLVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG D+PTNVLSFP  F +       +LGD+V+ ++++E EA    K  E H
Sbjct: 50  ESHELNMTYRGKDRPTNVLSFP--FEAPPEVELPLLGDLVICHQVVEREAQQQEKALEAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH+ D++A  ME LE  I++ LG  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIQDEEALEMESLETEIMQKLGYPDPYLAE 153


>gi|229529945|ref|ZP_04419335.1| hypothetical protein VCG_003049 [Vibrio cholerae 12129(1)]
 gi|229333719|gb|EEN99205.1| hypothetical protein VCG_003049 [Vibrio cholerae 12129(1)]
 gi|327483684|gb|AEA78091.1| metal-dependent hydrolase [Vibrio cholerae LMA3894-4]
          Length = 154

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          +++     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLTRTITPFQPQAEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++D+G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQDMGFTDPYLAE 152


>gi|240849890|ref|YP_002971278.1| hypothetical protein Bgr_02340 [Bartonella grahamii as4aup]
 gi|240267013|gb|ACS50601.1| hypothetical protein Bgr_02340 [Bartonella grahamii as4aup]
          Length = 163

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 5/157 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I V++  W DE  L  + E      + ++          + E+SL+FTD   +  +N 
Sbjct: 4   IDIMVKSGGWNDEKMLYNITEKALMTTMHHVSLANV-----VSEISLLFTDDKHMAQINA 58

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++R  +K TNVLSFP     +      MLGDI++A E + +EA   GK F++HL H+I+H
Sbjct: 59  QWRNKNKSTNVLSFPAFPLKAGNPPGPMLGDIIIARETVVLEAEKQGKTFQDHLTHMIVH 118

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           G LHLLGYDH  D +A  ME LER IL+ L I DPY 
Sbjct: 119 GILHLLGYDHETDNEAYQMEKLEREILQKLSIKDPYA 155


>gi|227114978|ref|ZP_03828634.1| putative metalloprotease [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 159

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQIA E      E       E  F + +  ++ +     + I E+++   D  
Sbjct: 1   MSQVILDLQIASEQTQGLPE-------EKDFQRWLEGVLPQ----FQEISEVTIRIVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E E+    K  E H
Sbjct: 50  ESRDLNNTYRGKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVERESAEQEKTVEEH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPYLAE 153


>gi|325291792|ref|YP_004277656.1| hypothetical protein AGROH133_03547 [Agrobacterium sp. H13-3]
 gi|325059645|gb|ADY63336.1| hypothetical protein AGROH133_03547 [Agrobacterium sp. H13-3]
          Length = 168

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 77/160 (48%), Positives = 94/160 (58%), Gaps = 1/160 (0%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIET 69
           LD+QI+VE   W  E  L          AV  L   +     +  VELSLVFTD   I  
Sbjct: 4   LDIQISVEAEGWSSEEDLLAFATKALDAAVDFLKREENQPFPKMPVELSLVFTDDENIRE 63

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N E+R  DK TNVLSFP       G    MLGDIV+A E +E EA  L K FE+HL HL
Sbjct: 64  INAEWRDKDKATNVLSFPAFPLEPGGMPGPMLGDIVIARETVEREALELEKSFEDHLTHL 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HGFLHL GYDH+D+++A  ME LE  IL  LG++DPY 
Sbjct: 124 LVHGFLHLFGYDHMDEEEAEEMESLETRILAVLGLSDPYA 163


>gi|260582082|ref|ZP_05849877.1| metal-dependent hydrolase [Haemophilus influenzae NT127]
 gi|260094972|gb|EEW78865.1| metal-dependent hydrolase [Haemophilus influenzae NT127]
          Length = 154

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN             E    +  +  +        N VE+++   D    + L
Sbjct: 6   VDLQIATENIEGLP-------TEEQIVQWATGAVQPEG----NEVEMTVRIVDEAESQEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I++ LG  DPY  +
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFADPYLAE 153


>gi|153213843|ref|ZP_01949049.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124115677|gb|EAY34497.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 154

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          +++     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLTRTITPFQAQAEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|254509288|ref|ZP_05121380.1| putative metalloprotease [Vibrio parahaemolyticus 16]
 gi|219547776|gb|EED24809.1| putative metalloprotease [Vibrio parahaemolyticus 16]
          Length = 154

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 15/163 (9%)

Query: 10  RLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQ AVE N     E   +T  +                  +   EL++   D     
Sbjct: 4   ELDLQFAVESNEGLPTEQDFQTWLDKTI------------IPFQQDAELTIRIVDEEESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F    G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  QLNHEYRGKDKPTNVLSFP--FEVPPGIEINLLGDLIICKQVVEREAQEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFEDPYLAE 152


>gi|323138530|ref|ZP_08073598.1| protein of unknown function UPF0054 [Methylocystis sp. ATCC 49242]
 gi|322396164|gb|EFX98697.1| protein of unknown function UPF0054 [Methylocystis sp. ATCC 49242]
          Length = 172

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 64/159 (40%), Positives = 84/159 (52%), Gaps = 7/159 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+ I +    W     L  L +     +++   +K         ELS+ F D   I  L
Sbjct: 3   VDIDILISTPAWESFEGLEALAQDCVRASLAESGAK----LAPGCELSVNFCDDAEIREL 58

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG DKPTNVLSFPT        +  +LGDIV+AYE +  EA    K   +H  H++
Sbjct: 59  NAEWRGKDKPTNVLSFPTPGT---LANRPLLGDIVIAYETVAREAGEQAKTLRDHTAHMV 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           IHGFLHL+GYDH    +A  ME LER I   LG+ DPY 
Sbjct: 116 IHGFLHLIGYDHETSAEAETMEALERRIAAGLGLRDPYA 154


>gi|315634775|ref|ZP_07890057.1| metal-dependent hydrolase [Aggregatibacter segnis ATCC 33393]
 gi|315476327|gb|EFU67077.1| metal-dependent hydrolase [Aggregatibacter segnis ATCC 33393]
          Length = 154

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E      E  L T      A+ +    +     + + VE+++   D      L
Sbjct: 6   IDLQIACE-----QESGLPT------AEQIEQWATAAVQPQSDEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLNYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAQEQDKPVMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLEAQIMTGLGFADPY 150


>gi|229523248|ref|ZP_04412655.1| hypothetical protein VIF_000104 [Vibrio cholerae TM 11079-80]
 gi|262190519|ref|ZP_06048763.1| predicted metal-dependent hydrolase [Vibrio cholerae CT 5369-93]
 gi|229339611|gb|EEO04626.1| hypothetical protein VIF_000104 [Vibrio cholerae TM 11079-80]
 gi|262033592|gb|EEY52086.1| predicted metal-dependent hydrolase [Vibrio cholerae CT 5369-93]
          Length = 154

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          +++     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLTRTITPFQPQAEVTIRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|71280897|ref|YP_270242.1| hypothetical protein CPS_3574 [Colwellia psychrerythraea 34H]
 gi|123631588|sp|Q47Y78|RRMF_COLP3 RecName: Full=Probable rRNA maturation factor
 gi|71146637|gb|AAZ27110.1| conserved hypothetical protein TIGR00043 [Colwellia psychrerythraea
           34H]
          Length = 155

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 10/158 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQ+A                +  F   V   +++         EL++   ++   + L
Sbjct: 5   IDLQVACTPTKLP--------TKEQFQLWVDTALAEVSSSPNQDFELTIRLVNNEESQQL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YR  DKPTNVLSFP  F   DG    +LGD+++  E+++ EA    K    H  HL+
Sbjct: 57  NKQYRDKDKPTNVLSFP--FEVPDGIELNLLGDLIICIEVMKQEAQEQNKALFEHWAHLV 114

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHL+G+DH+ D +A  ME +E +ILE LGI++PY
Sbjct: 115 IHGCLHLVGFDHISDTEALEMESIEITILEKLGISNPY 152


>gi|145298101|ref|YP_001140942.1| hypothetical protein ASA_1072 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166228140|sp|A4SJX2|RRMF_AERS4 RecName: Full=Probable rRNA maturation factor
 gi|142850873|gb|ABO89194.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 154

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 15/162 (9%)

Query: 11  LDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A  +      E  L+   +                  +   E+++   D      
Sbjct: 5   LDLQLACADTDGLPGEAQLQGWLDGTI------------LGFQEEAEVTVRIVDEAESRE 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  E H  H+
Sbjct: 53  LNLTYRGKDKPTNVLSFP--FEAPPGMELPLLGDLVICRQVVEQEATEQNKPLEAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LER I+++LG  DPY  D
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMEQLERDIMQELGFADPYLND 152


>gi|15602910|ref|NP_245982.1| putative metalloprotease [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431990|sp|P57900|RRMF_PASMU RecName: Full=Probable rRNA maturation factor
 gi|12721379|gb|AAK03129.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 158

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 61/159 (38%), Positives = 84/159 (52%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +DLQ+  EN      E  ++           S+            VE+++   D      
Sbjct: 6   IDLQLVCENTDNLPSEAQIQAWANRAIQPEFSD------------VEMTVRIVDEAESHD 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F   D     +LGD+V+  +++E EA   GK    H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FECPDEVELSLLGDLVICRQVVEKEAEEQGKPLMAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH++D +A  MEGLE  I++ LG +DPY
Sbjct: 112 VVHGCLHLLGYDHIEDAEAEEMEGLETEIMQSLGFDDPY 150


>gi|68248555|ref|YP_247667.1| putative metalloprotease [Haemophilus influenzae 86-028NP]
 gi|148827164|ref|YP_001291917.1| putative metalloprotease [Haemophilus influenzae PittGG]
 gi|81337018|sp|Q4QPP0|RRMF_HAEI8 RecName: Full=Probable rRNA maturation factor
 gi|166228383|sp|A5UFH8|RRMF_HAEIG RecName: Full=Probable rRNA maturation factor
 gi|68056754|gb|AAX87007.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|148718406|gb|ABQ99533.1| hypothetical protein CGSHiGG_02480 [Haemophilus influenzae PittGG]
 gi|309972862|gb|ADO96063.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 154

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN           +  +   + +    +     + N VE+++   D      L
Sbjct: 6   VDLQIATEN-----------IEGLPTEEQIVQWATGAVQPEGNEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY  +
Sbjct: 113 VHGCLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPYLAE 153


>gi|319403638|emb|CBI77223.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 158

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 67/159 (42%), Positives = 91/159 (57%), Gaps = 5/159 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + I +E+A W +E  L  + E      + +L      + E   ELSL+FTD   +  
Sbjct: 1   MISIDITIESAKWNNEKMLYNITEKALVTTLQHLS-----LNEITSELSLLFTDDTHMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N  +R  +KPTNVLSFP     +     LMLGDIV+A E +  EA    K F++HL H+
Sbjct: 56  INARWRNHNKPTNVLSFPAFPLKAGQNPKLMLGDIVIAQETVMREAEEEKKSFQDHLTHI 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IIHG LHLLGYDH  + +A  ME LE+ IL+ L I DPY
Sbjct: 116 IIHGILHLLGYDHETNDEANQMEKLEKEILQKLTIKDPY 154


>gi|301168606|emb|CBW28195.1| conserved protein [Haemophilus influenzae 10810]
          Length = 154

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN             E    +  +  I        N VE+++   D      L
Sbjct: 6   VDLQIATENIEGLP-------TEEQIVQWATAAIQPEG----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY  +
Sbjct: 113 VHGCLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPYLAE 153


>gi|307130058|ref|YP_003882074.1| hypothetical protein Dda3937_02469 [Dickeya dadantii 3937]
 gi|306527587|gb|ADM97517.1| conserved protein [Dickeya dadantii 3937]
          Length = 161

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA EN +    E   +   E V  +             + + E+++   D 
Sbjct: 1   MSQVILDLQIASENNSGLPSEADFQRWLEAVLPQ------------FQEVAEVTIRVVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YR  DKPTNVLSFP  F +       +LGD+++  +++E EA   GK  E 
Sbjct: 49  EESHHLNLTYRCKDKPTNVLSFP--FEAPPEVELPLLGDLIICRQVVEQEAVEQGKSAEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDSEAEEMEALETEIMQSMGYADPYLAE 153


>gi|302185145|ref|ZP_07261818.1| putative metalloprotease [Pseudomonas syringae pv. syringae 642]
          Length = 166

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 87/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E +   DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVASETSA-PDEAQFRLWCEMGLRQRSAD------------SELTIRLVDESEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSVDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEADEMEALERTLLEELGYPDPYADD 150


>gi|152969255|ref|YP_001334364.1| putative metalloprotease [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206580847|ref|YP_002239693.1| conserved hypothetical protein TIGR00043 [Klebsiella pneumoniae
           342]
 gi|238893719|ref|YP_002918453.1| putative metalloprotease [Klebsiella pneumoniae NTUH-K2044]
 gi|262041256|ref|ZP_06014467.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288936535|ref|YP_003440594.1| hypothetical protein Kvar_3682 [Klebsiella variicola At-22]
 gi|290510409|ref|ZP_06549779.1| metalloprotease [Klebsiella sp. 1_1_55]
 gi|330005962|ref|ZP_08305446.1| translation metalloprotein YbeY [Klebsiella sp. MS 92-3]
 gi|167016753|sp|A6T6B3|RRMF_KLEP7 RecName: Full=Probable rRNA maturation factor
 gi|226701661|sp|B5XZQ2|RRMF_KLEP3 RecName: Full=Probable rRNA maturation factor
 gi|150954104|gb|ABR76134.1| hypothetical protein KPN_00684 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206569905|gb|ACI11681.1| conserved hypothetical protein TIGR00043 [Klebsiella pneumoniae
           342]
 gi|238546035|dbj|BAH62386.1| hypothetical protein KP1_1641 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041372|gb|EEW42432.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288891244|gb|ADC59562.1| protein of unknown function UPF0054 [Klebsiella variicola At-22]
 gi|289777125|gb|EFD85123.1| metalloprotease [Klebsiella sp. 1_1_55]
 gi|328536034|gb|EGF62440.1| translation metalloprotein YbeY [Klebsiella sp. MS 92-3]
          Length = 157

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E  +   DE   +   + V                +   EL++   D 
Sbjct: 1   MSQVILDLQLACEETSGLPDEALFQRWVDAVIP------------PFQEESELTIRLVDV 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA+  GK  E 
Sbjct: 49  AESHELNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEASEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH++D +A  MEGLE  I+  LG  DPY
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEGLETEIMLALGYEDPY 150


>gi|254285630|ref|ZP_04960594.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150424492|gb|EDN16429.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 154

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          +++     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLTRTITPFQTQAEVTIRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G +  +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPPGMAMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++D+G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQDMGFTDPYLAE 152


>gi|320157149|ref|YP_004189528.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
 gi|319932461|gb|ADV87325.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
          Length = 154

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     D+  L +      A+     + K     +   E+++   DS     
Sbjct: 4   ELDLQLAVE-----DQNGLPS------AQDFQTWLDKTIPPFQPQAEVTIRIVDSQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEQEAIEQDKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFTDPYLAE 152


>gi|319774955|ref|YP_004137443.1| hypothetical protein HICON_02870 [Haemophilus influenzae F3047]
 gi|329123148|ref|ZP_08251718.1| metal-dependent hydrolase [Haemophilus aegyptius ATCC 11116]
 gi|317449546|emb|CBY85750.1| conserved protein [Haemophilus influenzae F3047]
 gi|327471703|gb|EGF17145.1| metal-dependent hydrolase [Haemophilus aegyptius ATCC 11116]
          Length = 154

 Score =  186 bits (473), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 15/162 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +DLQIA EN      E  +     V                + N VE+++   D      
Sbjct: 6   VDLQIATENIEGLPTEEQIVQWATVAIQ------------PEGNEVEMTVRIVDEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H+
Sbjct: 54  LNLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ LG +DPY  +
Sbjct: 112 VVHGCLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPYLAE 153


>gi|332288753|ref|YP_004419605.1| putative metalloprotease [Gallibacterium anatis UMN179]
 gi|330431649|gb|AEC16708.1| putative metalloprotease [Gallibacterium anatis UMN179]
          Length = 158

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E     D+ +L TL      +  +   ++    +++ VE+++   D      L
Sbjct: 9   VDLQIASE-----DQSNLPTL------QQFTYWATQAVKPQQDNVEMTIRIVDEEESHHL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           NF YRG D+PTNVLSFP  F   +G +  +LGD+V+  +++E EA       E H  HL 
Sbjct: 58  NFTYRGKDRPTNVLSFP--FEVPEGIALPLLGDLVICRQVVEKEAQEQQISLEAHYAHLT 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  +G  DPY
Sbjct: 116 VHGCLHLLGYDHIEDDEAEEMENLETEIMLSMGYADPY 153


>gi|300715841|ref|YP_003740644.1| conserved uncharacterized protein YbeY [Erwinia billingiae Eb661]
 gi|299061677|emb|CAX58793.1| conserved uncharacterized protein YbeY [Erwinia billingiae Eb661]
          Length = 157

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E  A    E   R   E V  +             +   E+++   D 
Sbjct: 1   MSTVILDLQLACEKPAGLPAESDFRRWLEAVLPQ------------FQEESEVTVRVVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    
Sbjct: 49  AESHELNHTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEKEAAEQEKPVLA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH++D +A  ME +E  I+  LG +DPY
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEADEMESIETEIMLALGYDDPY 150


>gi|319406554|emb|CBI80196.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 158

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 67/159 (42%), Positives = 91/159 (57%), Gaps = 5/159 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + I +E+A W +E  L  + E      + +L      + E   ELSL+FTD   +  
Sbjct: 1   MVSIDITIESAKWNNEKMLYNITEKALVTTLQHLS-----LNEITSELSLLFTDDTHMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N  +R  +KPTNVLSFP     +     LMLGDIV+A E +  EA    K F++HL H+
Sbjct: 56  INARWRNHNKPTNVLSFPAFPLKAGQNPKLMLGDIVIAQETVMREAEEEKKSFQDHLTHI 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IIHG LHLLGYDH  + +A  ME LE+ IL+ L I DPY
Sbjct: 116 IIHGILHLLGYDHETNDEANQMEKLEKEILQKLTIKDPY 154


>gi|229047214|ref|NP_933708.2| putative metalloprotease [Vibrio vulnificus YJ016]
 gi|46577353|sp|Q7MN02|RRMF_VIBVY RecName: Full=Probable rRNA maturation factor
          Length = 154

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     D+  L +      A+     + K     +   E+++   DS     
Sbjct: 4   ELDLQLAVE-----DQNGLPS------AQDFQTWLDKTIPPFQPQAEVTIRIVDSQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEQEAIEQDKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFTDPYLAE 152


>gi|268590391|ref|ZP_06124612.1| putative metalloprotease [Providencia rettgeri DSM 1131]
 gi|291314304|gb|EFE54757.1| putative metalloprotease [Providencia rettgeri DSM 1131]
          Length = 155

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/161 (39%), Positives = 89/161 (55%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA EN             E  F + ++ ++ K     + + E+++   D      L
Sbjct: 6   LDLQIACENPNGLP-------SEAEFQRWLAAVLPK----FQALSEVTIRVVDEQESHHL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E H  H++
Sbjct: 55  NLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAIDQQKTAEEHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  MEGLE  IL +LG  DPY  +
Sbjct: 113 VHGCLHLLGYDHIEDDEAEEMEGLETEILAELGYEDPYLAE 153


>gi|256821543|ref|YP_003145506.1| hypothetical protein Kkor_0317 [Kangiella koreensis DSM 16069]
 gi|256795082|gb|ACV25738.1| protein of unknown function UPF0054 [Kangiella koreensis DSM 16069]
          Length = 169

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 3/160 (1%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A +++   DEI ++      F    +         +    E+++   +    + L
Sbjct: 9   LDLQVACDSSTVPDEIDIKQWLATAFEVEAAKFGRAKTLAQP--FEMTVRVVEQAESQAL 66

Query: 71  NFEYRGIDKPTNVLSFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           N +YRG D PTNVLSFP       +G    +LGD+ +  E++E EA    KE  +H  H+
Sbjct: 67  NNDYRGKDNPTNVLSFPFEMPEGIEGLELSILGDLAICAEVVEQEAAEQKKELRSHWTHM 126

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HG LHLLGYDH+ D +A  ME LE  IL  LG+ +PY+
Sbjct: 127 VVHGGLHLLGYDHIKDNEALEMESLEIEILAQLGVENPYQ 166


>gi|261343535|ref|ZP_05971180.1| putative metalloprotease [Providencia rustigianii DSM 4541]
 gi|282568684|gb|EFB74219.1| putative metalloprotease [Providencia rustigianii DSM 4541]
          Length = 155

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA EN      E   +     V  K             +   E+++   D 
Sbjct: 1   MSDVILDLQIASENIEGLPSEAMFQHWVNAVLPK------------FQAESEVTIRIVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVVEKEATEQQKSEEE 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  MEGLE  IL ++G  DPY  +
Sbjct: 107 HWAHMVVHGCLHLLGYDHIEDDEAEEMEGLETEILAEMGYADPYLAE 153


>gi|145630707|ref|ZP_01786486.1| hypothetical protein CGSHi22421_02154 [Haemophilus influenzae
           R3021]
 gi|144983833|gb|EDJ91283.1| hypothetical protein CGSHi22421_02154 [Haemophilus influenzae
           R3021]
          Length = 154

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN           +  +   + +    +     + N VE+++   D    + L
Sbjct: 6   VDLQIATEN-----------IEGLPTEEQIVQWATGAVQPEGNEVEMTVRIVDEAESQEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY  +
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPYLAE 153


>gi|237730636|ref|ZP_04561117.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906175|gb|EEH92093.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 155

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A E     DE  L T  E  F   +  +I +     +   E+++   D  
Sbjct: 1   MSQVILDLQLACE-----DESGLPT--ESQFQGWLDAVIPQ----FQEESEVTIRLVDDA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DK TNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H
Sbjct: 50  ESHDLNLTYRGKDKSTNVLSFP--FEAPPGIEMSLLGDLIICRQVVEKEAQEQGKPLEAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYEDPYIAE 153


>gi|251791997|ref|YP_003006717.1| putative metalloprotease [Aggregatibacter aphrophilus NJ8700]
 gi|247533384|gb|ACS96630.1| putative metalloprotease in flp 5' region [Aggregatibacter
           aphrophilus NJ8700]
          Length = 154

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E      E  L T      A+ +    +     + + VE+++   D      L
Sbjct: 6   IDLQIACE-----QETGLPT------AEQIEQWATVAVQPQTDEVEMTVRIVDEAESHAL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA   GK    H  H++
Sbjct: 55  NLNYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAQEQGKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMIGLGFVDPY 150


>gi|323495443|ref|ZP_08100520.1| metal-binding heat shock protein [Vibrio brasiliensis LMG 20546]
 gi|323310366|gb|EGA63553.1| metal-binding heat shock protein [Vibrio brasiliensis LMG 20546]
          Length = 154

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE+     E  L +L ++         +S      +   E+++   D      
Sbjct: 4   ELDLQLAVES-----EDGLPSLEDIQL------WLSSAVTKFQPQAEVTVRIVDEQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEREAIEQNKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFEDPYLAE 152


>gi|319405108|emb|CBI78712.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 158

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/159 (42%), Positives = 93/159 (58%), Gaps = 5/159 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + I +E+A W DE  L  + +      + +L      + E   ELSL+FTD  R+  
Sbjct: 1   MIAIDITIESAKWNDEEMLYNITDKALVTTLQHLS-----LNEITSELSLLFTDDTRMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N ++R  +KPTNVLSFP     +     LMLGDIV+A E +  EA    K F++HL H+
Sbjct: 56  INAQWRHHNKPTNVLSFPAFPLKAGQNPRLMLGDIVIAQETVMREAEEERKSFQDHLTHI 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IIHG LHLLGYDH  + +A  ME LE+ IL+ L I DPY
Sbjct: 116 IIHGILHLLGYDHETNNEANQMEKLEKEILQKLSIKDPY 154


>gi|121601777|ref|YP_989494.1| hypothetical protein BARBAKC583_1245 [Bartonella bacilliformis
           KC583]
 gi|145572753|sp|A1UU41|RRMF_BARBK RecName: Full=Probable rRNA maturation factor
 gi|120613954|gb|ABM44555.1| conserved hypothetical protein TIGR00043 [Bartonella bacilliformis
           KC583]
          Length = 158

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 69/159 (43%), Positives = 94/159 (59%), Gaps = 5/159 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + + +ENA WGDE  L T+ E      +  L      + +   ELSL+FT++ R+  
Sbjct: 1   MISINMTIENAEWGDEKILYTITEKALIATIDRLS-----LTQVTSELSLLFTNNMRMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N ++R  +KPTNVLSFP     +      MLGDIVLA E I  EA   GK F +HL H+
Sbjct: 56  INTQWRNKNKPTNVLSFPAFPLKAGQNPGPMLGDIVLARETIVYEAEEEGKSFHDHLTHM 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I+HG LHLLGYDH  D +A  ME LE+ IL+ + I +PY
Sbjct: 116 IVHGILHLLGYDHETDDEAYQMEELEKEILQKIAIKNPY 154


>gi|15640976|ref|NP_230607.1| putative metalloprotease [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591013|ref|ZP_01678330.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153820004|ref|ZP_01972671.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153823312|ref|ZP_01975979.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227081134|ref|YP_002809685.1| hypothetical protein VCM66_0916 [Vibrio cholerae M66-2]
 gi|229505440|ref|ZP_04394950.1| hypothetical protein VCF_000648 [Vibrio cholerae BX 330286]
 gi|229510890|ref|ZP_04400369.1| hypothetical protein VCE_002297 [Vibrio cholerae B33]
 gi|229518011|ref|ZP_04407455.1| hypothetical protein VCC_002035 [Vibrio cholerae RC9]
 gi|229608459|ref|YP_002879107.1| metalloprotease [Vibrio cholerae MJ-1236]
 gi|254848091|ref|ZP_05237441.1| metalloprotease [Vibrio cholerae MO10]
 gi|255744743|ref|ZP_05418694.1| predicted metal-dependent hydrolase [Vibrio cholera CIRS 101]
 gi|262161123|ref|ZP_06030234.1| predicted metal-dependent hydrolase [Vibrio cholerae INDRE 91/1]
 gi|298498924|ref|ZP_07008731.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|26006919|sp|Q9KTE2|RRMF_VIBCH RecName: Full=Probable rRNA maturation factor
 gi|254807269|sp|C3LTK8|RRMF_VIBCM RecName: Full=Probable rRNA maturation factor
 gi|9655419|gb|AAF94122.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547123|gb|EAX57255.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|126509455|gb|EAZ72049.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519176|gb|EAZ76399.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227009022|gb|ACP05234.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229344726|gb|EEO09700.1| hypothetical protein VCC_002035 [Vibrio cholerae RC9]
 gi|229350855|gb|EEO15796.1| hypothetical protein VCE_002297 [Vibrio cholerae B33]
 gi|229357663|gb|EEO22580.1| hypothetical protein VCF_000648 [Vibrio cholerae BX 330286]
 gi|229371114|gb|ACQ61537.1| hypothetical protein VCD_003377 [Vibrio cholerae MJ-1236]
 gi|254843796|gb|EET22210.1| metalloprotease [Vibrio cholerae MO10]
 gi|255737774|gb|EET93168.1| predicted metal-dependent hydrolase [Vibrio cholera CIRS 101]
 gi|262028873|gb|EEY47526.1| predicted metal-dependent hydrolase [Vibrio cholerae INDRE 91/1]
 gi|297543257|gb|EFH79307.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 154

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          +++     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLTRTITPFQAQAEVTVRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPSGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|310766986|gb|ADP11936.1| conserved uncharacterized protein YbeY [Erwinia sp. Ejp617]
          Length = 155

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           +    LDLQ+A ++      E   +   E V  +             +   E+++   D 
Sbjct: 1   MTQVILDLQLACKSEQGLPTEADFQRWLEAVLPQ------------FQPESEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHQLNHTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQEKVLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H++IHG LHLLGYDH+ D +A  ME LE  I+  LG  DPY
Sbjct: 107 HWAHMVIHGSLHLLGYDHIVDDEAEEMESLETEIMLALGYPDPY 150


>gi|229525570|ref|ZP_04414975.1| hypothetical protein VCA_003202 [Vibrio cholerae bv. albensis
           VL426]
 gi|229339151|gb|EEO04168.1| hypothetical protein VCA_003202 [Vibrio cholerae bv. albensis
           VL426]
          Length = 154

 Score =  185 bits (471), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  E          + +     +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EHGLPSEAEFAL------WLIRTITPFQPQAEVTIRIVDEAESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K  + H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FETPPGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFTDPYLAE 152


>gi|15599177|ref|NP_252671.1| metalloprotease [Pseudomonas aeruginosa PAO1]
 gi|107103500|ref|ZP_01367418.1| hypothetical protein PaerPA_01004570 [Pseudomonas aeruginosa PACS2]
 gi|116052021|ref|YP_789136.1| putative metalloprotease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254236875|ref|ZP_04930198.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254242668|ref|ZP_04935990.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296387490|ref|ZP_06876965.1| putative metalloprotease [Pseudomonas aeruginosa PAb1]
 gi|313109422|ref|ZP_07795382.1| hypothetical protein PA39016_001790022 [Pseudomonas aeruginosa
           39016]
 gi|26006910|sp|Q9HX37|RRMF_PSEAE RecName: Full=Probable rRNA maturation factor
 gi|122261168|sp|Q02SF0|RRMF_PSEAB RecName: Full=Probable rRNA maturation factor
 gi|9950173|gb|AAG07369.1|AE004816_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115587242|gb|ABJ13257.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168806|gb|EAZ54317.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126196046|gb|EAZ60109.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|310881884|gb|EFQ40478.1| hypothetical protein PA39016_001790022 [Pseudomonas aeruginosa
           39016]
          Length = 160

 Score =  185 bits (471), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 78/162 (48%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A        E   R  CE+   +                 EL++   D      
Sbjct: 4   ELDLQVASAAPDLPSEAQFRAWCELALRQR-------------PESELTIRLVDEAEGLE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSFP A    +     +LGD+V+   ++  EA    K  + H  HL
Sbjct: 51  LNSTYRHKDYATNVLSFP-ADVPDELLDIPLLGDLVICAPVVAREALEQRKPLQAHWAHL 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 110 VIHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 151


>gi|323499964|ref|ZP_08104922.1| metal-binding heat shock protein [Vibrio sinaloensis DSM 21326]
 gi|323314981|gb|EGA68034.1| metal-binding heat shock protein [Vibrio sinaloensis DSM 21326]
          Length = 155

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     DE  L T  +      +   ++      +   E+++   D      
Sbjct: 4   ELDLQLAVE-----DESGLPTFDD------IHLWLNSAVAKFQPQAEVTVRLVDEQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LNF+YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNFDYRGKDKPTNVLSFP--FEAPPGIEMDLLGDLIICRQVVEREAIEQQKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQEMGFLDPYLAE 152


>gi|127513853|ref|YP_001095050.1| putative metalloprotease [Shewanella loihica PV-4]
 gi|171855250|sp|A3QH43|RRMF_SHELP RecName: Full=Probable rRNA maturation factor
 gi|126639148|gb|ABO24791.1| protein of unknown function UPF0054 [Shewanella loihica PV-4]
          Length = 157

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A +      +    +   +     +               E+++   D    + L
Sbjct: 11  LDLQVATQAEQLPSQEEFESWVRLALGNVM------------PEAEMTIRLVDEAESQQL 58

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F S       +LGD+V+   ++E EA + GK    H  H++
Sbjct: 59  NHTYRGKDKPTNVLSFP--FESPPEVELPLLGDLVICVPVVEQEAEIQGKSLTAHWAHMV 116

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH+ D +A  ME LE  ++E LG  +PY+
Sbjct: 117 VHGCLHLLGYDHIIDSEAEEMESLETQLIESLGFPNPYK 155


>gi|229845426|ref|ZP_04465556.1| putative metalloprotease [Haemophilus influenzae 6P18H1]
 gi|319896426|ref|YP_004134619.1| hypothetical protein HIBPF00040 [Haemophilus influenzae F3031]
 gi|229811622|gb|EEP47321.1| putative metalloprotease [Haemophilus influenzae 6P18H1]
 gi|317431928|emb|CBY80274.1| conserved protein [Haemophilus influenzae F3031]
          Length = 154

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN           +  +   + +    +     + N VE+++   D      L
Sbjct: 6   VDLQIATEN-----------IEGLPTEEQIVQWATGAVQPEGNEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY  +
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPYLAE 153


>gi|259909114|ref|YP_002649470.1| hypothetical protein YbeY [Erwinia pyrifoliae Ep1/96]
 gi|224964736|emb|CAX56253.1| conserved uncharacterized protein YbeY [Erwinia pyrifoliae Ep1/96]
 gi|283479141|emb|CAY75057.1| putative metalloprotease ybeY [Erwinia pyrifoliae DSM 12163]
          Length = 155

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           +    LDLQ+A ++      E   +   E V  +             +   E+++   D 
Sbjct: 1   MTQVILDLQLACKSEQGLPTEGDFQRWLEAVLPQ------------FQPESEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHQLNHTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQEKVLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H++IHG LHLLGYDH+ D +A  ME LE  I+  LG  DPY
Sbjct: 107 HWAHMVIHGSLHLLGYDHIVDDEAEEMESLETEIMLALGYPDPY 150


>gi|16271980|ref|NP_438177.1| putative metalloprotease [Haemophilus influenzae Rd KW20]
 gi|145636793|ref|ZP_01792459.1| hypothetical protein CGSHiHH_06750 [Haemophilus influenzae PittHH]
 gi|145641868|ref|ZP_01797443.1| hypothetical protein CGSHiR3021_01322 [Haemophilus influenzae
           R3021]
 gi|260580692|ref|ZP_05848519.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|2495567|sp|P71335|RRMF_HAEIN RecName: Full=Probable rRNA maturation factor
 gi|60593985|pdb|1XAX|A Chain A, Nmr Structure Of Hi0004, A Putative Essential Gene Product
           From Haemophilus Influenzae
 gi|1572948|gb|AAC21683.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|145270091|gb|EDK10028.1| hypothetical protein CGSHiHH_06750 [Haemophilus influenzae PittHH]
 gi|145273490|gb|EDK13361.1| hypothetical protein CGSHiR3021_01322 [Haemophilus influenzae
           22.4-21]
 gi|260092754|gb|EEW76690.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 154

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN           +  +   + +    +     + N VE+++   D      L
Sbjct: 6   VDLQIATEN-----------IEGLPTEEQIVQWATGAVQPEGNEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA+   K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREASEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY  +
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPYLAE 153


>gi|229846922|ref|ZP_04467028.1| putative metalloprotease [Haemophilus influenzae 7P49H1]
 gi|229810006|gb|EEP45726.1| putative metalloprotease [Haemophilus influenzae 7P49H1]
          Length = 154

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN           +  +   + +    +     + N VE+++   D      L
Sbjct: 6   VDLQIATEN-----------IEGLPTEEQIVQWATGAVQPEGNEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAVEQDKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY  +
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPYLAE 153


>gi|218708743|ref|YP_002416364.1| putative metalloprotease [Vibrio splendidus LGP32]
 gi|254806592|sp|B7VKG1|RRMF_VIBSL RecName: Full=Probable rRNA maturation factor
 gi|218321762|emb|CAV17717.1| Hypothetical protein VS_0722 [Vibrio splendidus LGP32]
          Length = 153

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L T       + +   + K     +   EL++   D+     
Sbjct: 4   ELDLQLAVEN-----EQGLPT------EQDIQLWLDKTIPQFQENAELTVRIVDTQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHEYRGKDKPTNVLSFP--FEAPPGIELDLLGDLIICRQVVEKEAEEQSKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY ++
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQSMGFEDPYILE 152


>gi|260913090|ref|ZP_05919572.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632677|gb|EEX50846.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 156

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN       +L T  +      +    ++    + + VE+++   D      L
Sbjct: 6   IDLQIATENTE-----NLPTEAQ------IQEWANRAVQPELSDVEMTVRIVDEAESHDL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           NF YRG DKPTNVLSFP  F   D     +LGD+V+  +++E EA   GK    H  H++
Sbjct: 55  NFTYRGKDKPTNVLSFP--FECPDEVELGLLGDLVICRQVVEKEAEEQGKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I++ LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMENLETEIMQSLGFEDPY 150


>gi|148981400|ref|ZP_01816396.1| hypothetical protein VSWAT3_09548 [Vibrionales bacterium SWAT-3]
 gi|145960892|gb|EDK26222.1| hypothetical protein VSWAT3_09548 [Vibrionales bacterium SWAT-3]
          Length = 153

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L T  ++         + K     +   EL++   D+     
Sbjct: 4   ELDLQLAVEN-----EQGLPTEHDIQL------WLDKTIPQFQKSAELTIRIVDTEESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G     LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHEYRGKDKPTNVLSFP--FEAPPGIELDFLGDLIICRQVVEKEAEEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY ++
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQAMGFEDPYILE 152


>gi|27363747|ref|NP_759275.1| metal-binding heat shock protein [Vibrio vulnificus CMCP6]
 gi|29428187|sp|Q8DFE6|RRMF_VIBVU RecName: Full=Probable rRNA maturation factor
 gi|27359863|gb|AAO08802.1| predicted metal-dependent hydrolase [Vibrio vulnificus CMCP6]
          Length = 154

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     D+  L +      A+     + K     +   E+++   DS     
Sbjct: 4   ELDLQLAVE-----DQNGLPS------AQDFQTWLDKTIPPFQPQAEVTIRIVDSQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGMEMDLLGDLVICRQVVEQEAIDQDKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGFTDPYLAE 152


>gi|59711364|ref|YP_204140.1| putative metalloprotease [Vibrio fischeri ES114]
 gi|71658769|sp|Q5E6U4|RRMF_VIBF1 RecName: Full=Probable rRNA maturation factor
 gi|59479465|gb|AAW85252.1| conserved protein [Vibrio fischeri ES114]
          Length = 153

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/163 (38%), Positives = 85/163 (52%), Gaps = 15/163 (9%)

Query: 10  RLDLQIAVENA-LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQIA EN      E  L T    V  +             +   EL++   D     
Sbjct: 4   ELDLQIACENENGLPSEKELMTWLNAVIPQ------------FQPQAELTIRIVDEKESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  ELNHEYRGKDKPTNVLSFP--FEAPPGLELNLLGDLIICRQVVEEEAIEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +++HG LHLLGYDH++D +A  ME LE  +++ +G  DPY  +
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETELMQGMGFEDPYIAE 152


>gi|229592785|ref|YP_002874904.1| putative metalloprotease [Pseudomonas fluorescens SBW25]
 gi|259647080|sp|C3K2K8|RRMF_PSEFS RecName: Full=Probable rRNA maturation factor
 gi|229364651|emb|CAY52573.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 164

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E      E   R  C +   +  ++             EL++   D      
Sbjct: 3   ELDLQLATEAPA-PSEAQFREWCALALRQRTAD------------SELTIRLVDEPEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP A    +     +LGD+V+  E++E EA   GKE E H  HL
Sbjct: 50  LNHTWRQKDYATNVLSFP-ADVPDELLDIPLLGDLVICVEVVEREAKEQGKELEAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD +A  ME LE+++L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDDEAEEMETLEQTLLAELGHPDPYADD 150


>gi|84394392|ref|ZP_00993111.1| hypothetical protein V12B01_09906 [Vibrio splendidus 12B01]
 gi|84374994|gb|EAP91922.1| hypothetical protein V12B01_09906 [Vibrio splendidus 12B01]
          Length = 153

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIAVEN     E  L T       + +   + K     +   EL++   D+     
Sbjct: 4   ELDLQIAVEN-----EQGLPT------EQDIQLWLDKTIPQFQENAELTVRIVDTEESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F    G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEVPPGMELDLLGDLIICRQVVEKEAEEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY ++
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQTMGFEDPYILE 152


>gi|145629144|ref|ZP_01784943.1| hypothetical protein CGSHi22121_10090 [Haemophilus influenzae
           22.1-21]
 gi|145633443|ref|ZP_01789173.1| hypothetical protein CGSHi3655_04405 [Haemophilus influenzae 3655]
 gi|145639708|ref|ZP_01795311.1| hypothetical protein CGSHiII_09331 [Haemophilus influenzae PittII]
 gi|148825715|ref|YP_001290468.1| putative metalloprotease [Haemophilus influenzae PittEE]
 gi|166229102|sp|A5UBD4|RRMF_HAEIE RecName: Full=Probable rRNA maturation factor
 gi|144978647|gb|EDJ88370.1| hypothetical protein CGSHi22121_10090 [Haemophilus influenzae
           22.1-21]
 gi|144986006|gb|EDJ92608.1| hypothetical protein CGSHi3655_04405 [Haemophilus influenzae 3655]
 gi|145271265|gb|EDK11179.1| hypothetical protein CGSHiII_09331 [Haemophilus influenzae PittII]
 gi|148715875|gb|ABQ98085.1| hypothetical protein CGSHiEE_03300 [Haemophilus influenzae PittEE]
 gi|309750677|gb|ADO80661.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 154

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA EN             E    +  +  I        N VE+++   D      L
Sbjct: 6   VDLQIATENIEGLP-------TEEQIVQWATAAIQPEG----NEVEMTVRIVDEAESHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAAEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I++ LG +DPY  +
Sbjct: 113 VHGGLHLLGYDHIEDDEAEEMESLETQIMQGLGFDDPYLAE 153


>gi|326796265|ref|YP_004314085.1| metalloprotease ybeY [Marinomonas mediterranea MMB-1]
 gi|326547029|gb|ADZ92249.1| metalloprotease ybeY [Marinomonas mediterranea MMB-1]
          Length = 155

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/160 (39%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 10  RLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQIA E N             E    K             +   E+++   D    +
Sbjct: 5   DLDLQIATEENDGLPSHKEFEFWAESALPK-----------DHDTCYEMTIRLVDEEESQ 53

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN EYRG +KPTNVLSFP  F   DG    +LGD+V+  +++E EA    K+  +H  H
Sbjct: 54  TLNNEYRGKNKPTNVLSFP--FEVPDGVELPLLGDLVICRQVVEREARDQKKDLNHHWCH 111

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +++HG LHL GYDH+ D +A  ME LE  IL  L I DPY
Sbjct: 112 MVVHGILHLRGYDHIKDDEAEEMEALETQILATLNIPDPY 151


>gi|260773263|ref|ZP_05882179.1| predicted metal-dependent hydrolase [Vibrio metschnikovii CIP
           69.14]
 gi|260612402|gb|EEX37605.1| predicted metal-dependent hydrolase [Vibrio metschnikovii CIP
           69.14]
          Length = 154

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIAVE     DE  L +  + +         S      ++  E+++   D      
Sbjct: 4   ELDLQIAVE-----DEQGLPSFDDFLI------WFSAAVTPFQSQAEVTIRIVDQAESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +       +LGD+V+  +++E EA    K    H  H+
Sbjct: 53  LNLNYRGKDKPTNVLSFP--FEAPAEIELDLLGDLVICRQVVEQEALEQEKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH+DD++A  ME LE  I++++G +DPY  +
Sbjct: 111 VVHGTLHLLGYDHIDDQEADEMEALETEIMQNMGFDDPYLAE 152


>gi|238786073|ref|ZP_04630031.1| metalloprotease [Yersinia bercovieri ATCC 43970]
 gi|238713012|gb|EEQ05066.1| metalloprotease [Yersinia bercovieri ATCC 43970]
          Length = 154

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 57/159 (35%), Positives = 81/159 (50%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA  N+     E   +   E V  +             + + E+++   D      
Sbjct: 3   LDLQIACANSQGLPTEADFQQWLEAVLPQ------------FQEVSEVTIRLVDEAESHQ 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA    K    H  H+
Sbjct: 51  LNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAVEQEKALFAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 109 VVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 147


>gi|254503442|ref|ZP_05115593.1| conserved hypothetical protein TIGR00043, putative [Labrenzia
           alexandrii DFL-11]
 gi|222439513|gb|EEE46192.1| conserved hypothetical protein TIGR00043, putative [Labrenzia
           alexandrii DFL-11]
          Length = 173

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/157 (45%), Positives = 89/157 (56%), Gaps = 5/157 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + IAVE   W DE  L  L +   A A+     +         E+SL+FT+   I+ LN 
Sbjct: 13  IDIAVEAGDWPDETALIKLAQTAIAAALKGADLEVL----EKAEVSLLFTNDEGIQKLNH 68

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++R  DKPTNVLSFP      D     +LGDIV AYE +  EA  LG EF NHL HL +H
Sbjct: 69  QWRDKDKPTNVLSFPGN-DPQDDVYGPLLGDIVFAYETVAKEAEELGIEFNNHLTHLTVH 127

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           G LHL  YDH +  +A +ME LE +IL  LGI+DPY 
Sbjct: 128 GLLHLFDYDHQEKDEAELMESLETAILAGLGIDDPYA 164


>gi|91228824|ref|ZP_01262731.1| hypothetical protein V12G01_00175 [Vibrio alginolyticus 12G01]
 gi|269965465|ref|ZP_06179584.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91187629|gb|EAS73954.1| hypothetical protein V12G01_00175 [Vibrio alginolyticus 12G01]
 gi|269829944|gb|EEZ84174.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 154

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  +          + K   + +   E+++   D     T
Sbjct: 4   ELDLQLAVEN-----EEGLPSQQDFQL------WLDKTIPLFQPQAEVTIRIVDEQESHT 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHEYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEKEAVEQSKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPYIAE 152


>gi|86148577|ref|ZP_01066862.1| hypothetical protein MED222_02087 [Vibrio sp. MED222]
 gi|85833643|gb|EAQ51816.1| hypothetical protein MED222_02087 [Vibrio sp. MED222]
          Length = 153

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L T       + +   + K     +   EL++   D+     
Sbjct: 4   ELDLQLAVEN-----EQGLPT------EQDIQLWLDKTIPQFQESAELTVRIVDTQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGVELDLLGDLIICRQVVEKEAEEQSKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY ++
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQTMGFEDPYILE 152


>gi|258544939|ref|ZP_05705173.1| metalloprotease [Cardiobacterium hominis ATCC 15826]
 gi|258519859|gb|EEV88718.1| metalloprotease [Cardiobacterium hominis ATCC 15826]
          Length = 161

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 6/159 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L I  +    G++    +  E    + +    ++     E  +EL++   D+  ++ L
Sbjct: 1   MSLTIDYQTEELGNDERFPS--EKRLQRWLET--ARATLAIEEALELTIRLVDNDEMQEL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N EYRG D PTNVLSFP  +   +     +LGD+V+A  ++  EA    K  E H  H++
Sbjct: 57  NREYRGKDYPTNVLSFPCDWDLPE--EPRLLGDVVIAAAVVNREAKEQKKTMEAHWAHIV 114

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           IHGFLHLLGYDH++D DA  ME  ER+IL  LG  DPY 
Sbjct: 115 IHGFLHLLGYDHIEDADAEKMENTERNILAQLGYADPYA 153


>gi|117617448|ref|YP_857734.1| hypothetical protein AHA_3243 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|145558811|sp|A0KN83|RRMF_AERHH RecName: Full=Probable rRNA maturation factor
 gi|117558855|gb|ABK35803.1| conserved hypothetical protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 154

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 15/162 (9%)

Query: 11  LDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A         E  L+   +                  +   E+++   D      
Sbjct: 5   LDLQLASASTDGLPSEAQLQGWLDGTI------------LGFQQEAEVTVRIVDEAESNE 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA   GK    H  H+
Sbjct: 53  LNLTYRGKDKPTNVLSFP--FEAPPGLELPLLGDLVICRQVVEREAAEQGKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LER I+++LG  DPY  D
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMETLERDIMQELGFADPYLND 152


>gi|254427071|ref|ZP_05040778.1| conserved hypothetical protein TIGR00043, putative [Alcanivorax sp.
           DG881]
 gi|196193240|gb|EDX88199.1| conserved hypothetical protein TIGR00043, putative [Alcanivorax sp.
           DG881]
          Length = 175

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 64/168 (38%), Positives = 87/168 (51%), Gaps = 13/168 (7%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           +  +  P +D+Q A +     DE HL   CE V   A++     G        +++L   
Sbjct: 1   MNGIPTPTVDIQWASDAPDAPDEPHL---CEWVRHAAIAAGGVVG--------DITLRIV 49

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           D   I TLN +YR  D  TNVLSFP        +G    +LGDI++   ++  EA+   K
Sbjct: 50  DEDEIRTLNRDYRDKDATTNVLSFPFDMPEGLPEGAVEPLLGDIIICDAVVCREASEQHK 109

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             + H  H++ HG LHLLGYDH+DD DA VME LE   L +LG  DPY
Sbjct: 110 PLDAHWAHMVTHGVLHLLGYDHIDDDDALVMETLEIRALGELGFPDPY 157


>gi|153840647|ref|ZP_01993314.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|260900743|ref|ZP_05909138.1| putative metalloprotease [Vibrio parahaemolyticus AQ4037]
 gi|149745688|gb|EDM56819.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|308108997|gb|EFO46537.1| putative metalloprotease [Vibrio parahaemolyticus AQ4037]
          Length = 154

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  +          + K   + +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EEGLPSQQDFQL------WLDKTIPLFQPQAEVTIRIVDEKESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHEYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEKEAIEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPYIAE 152


>gi|33152458|ref|NP_873811.1| putative metalloprotease [Haemophilus ducreyi 35000HP]
 gi|46577397|sp|Q7VLN5|RRMF_HAEDU RecName: Full=Probable rRNA maturation factor
 gi|33148681|gb|AAP96200.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 158

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 64/164 (39%), Positives = 88/164 (53%), Gaps = 10/164 (6%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDSHRI 67
           P +DLQIA EN+               F+  V + ++ +       + EL++   D    
Sbjct: 3   PIIDLQIASENSQGLPSAQ-------QFSDWVKHALTYEAQTSNIPLTELTIRIVDEAES 55

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +I+E EA       + H  
Sbjct: 56  HHLNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLIICRQIVEKEALEQKISLDAHWA 113

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           HL IHG LHLLGYDH+D+ +A  MEGLE  I++ LG  DPY  +
Sbjct: 114 HLTIHGTLHLLGYDHIDEHEAEQMEGLESDIMQQLGFQDPYLAE 157


>gi|167625136|ref|YP_001675430.1| putative metalloprotease [Shewanella halifaxensis HAW-EB4]
 gi|189039845|sp|B0TR40|RRMF_SHEHH RecName: Full=Probable rRNA maturation factor
 gi|167355158|gb|ABZ77771.1| protein of unknown function UPF0054 [Shewanella halifaxensis
           HAW-EB4]
          Length = 156

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIAVE      +  L    +      +S              EL++   D    + 
Sbjct: 9   DLDLQIAVEGFELPSQAELELWVKTALRDTMSE------------AELTIRIVDVEESQE 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+   +++ EA    K    H  H+
Sbjct: 57  LNSTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLVICAAVVKQEAMDQNKPLIAHWAHM 114

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HG LHLLGYDH+DD +A  ME LE  ++E LG  +PY+
Sbjct: 115 VVHGCLHLLGYDHIDDSEAEEMESLETHLIESLGYINPYK 154


>gi|123443202|ref|YP_001007176.1| putative metalloprotease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160872|ref|YP_004297449.1| putative metalloprotease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|145572776|sp|A1JQ74|RRMF_YERE8 RecName: Full=Probable rRNA maturation factor
 gi|122090163|emb|CAL13026.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318604775|emb|CBY26273.1| metal-dependent hydrolase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665102|gb|ADZ41746.1| putative metalloprotease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863404|emb|CBX73526.1| putative metalloprotease YE2987 [Yersinia enterocolitica W22703]
          Length = 157

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA  ++     E   +   E V  +             + + E+++   D 
Sbjct: 1   MSQVILDLQIACADSQGLPTEADFQHWLEAVLPQ------------FQEVSEVTIRVVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E EA    K    
Sbjct: 49  AESHELNLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAVEQEKALLA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 107 HWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 150


>gi|49473879|ref|YP_031921.1| hypothetical protein BQ02120 [Bartonella quintana str. Toulouse]
 gi|59799034|sp|Q6G0N3|RRMF_BARQU RecName: Full=Probable rRNA maturation factor
 gi|49239382|emb|CAF25715.1| hypothetical protein BQ02120 [Bartonella quintana str. Toulouse]
          Length = 158

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 5/160 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + I VE+A W +E  L  + E      +++L  +       + E+SL+FTD   +  
Sbjct: 1   MITIDITVESARWNNEKMLYDITEKALKTTMNHLSLENV-----VSEISLLFTDDKHMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N ++R  +K TNVLSFP     +     LMLGDI++A E + +EA   GK F++HL H+
Sbjct: 56  INAQWRNKNKSTNVLSFPALPLKAGDPPGLMLGDIIIAQETVVLEAKKEGKSFQDHLTHM 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           I+HG LHLLGY+H  + +AC ME LER IL  L INDPY 
Sbjct: 116 IVHGILHLLGYNHETNDEACQMEELEREILLKLSINDPYA 155


>gi|170728027|ref|YP_001762053.1| putative metalloprotease [Shewanella woodyi ATCC 51908]
 gi|238688644|sp|B1KDV6|RRMF_SHEWM RecName: Full=Probable rRNA maturation factor
 gi|169813374|gb|ACA87958.1| protein of unknown function UPF0054 [Shewanella woodyi ATCC 51908]
          Length = 158

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA +N     +              ++              EL++   D+   + L
Sbjct: 12  LDLQIATDNKQLPTQQDFELWVRTALRNTMTE------------AELTVRVVDAEESQAL 59

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+++   ++E EA    K  + H  H++
Sbjct: 60  NSTYRGKDKPTNVLSFP--FEAPAEIELPLLGDLIICASVVEHEAIQQNKPLQAHWAHMV 117

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D +A  ME +E  ++E LG N+PY+
Sbjct: 118 VHGCLHLLGYDHINDIEAEEMESIETQLIESLGFNNPYK 156


>gi|262394982|ref|YP_003286836.1| putative metal-dependent hydrolase [Vibrio sp. Ex25]
 gi|262338576|gb|ACY52371.1| predicted metal-dependent hydrolase [Vibrio sp. Ex25]
          Length = 154

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  +          + K   + +   E+++   D     T
Sbjct: 4   ELDLQLAVEN-----EEGLPSQQDFQL------WLDKTIPLFQPQAEVTIRIVDEQESHT 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHEYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEKEAIEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPYIAE 152


>gi|28897505|ref|NP_797110.1| putative metalloprotease [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363860|ref|ZP_05776612.1| putative metalloprotease [Vibrio parahaemolyticus K5030]
 gi|260878353|ref|ZP_05890708.1| putative metalloprotease [Vibrio parahaemolyticus AN-5034]
 gi|260898987|ref|ZP_05907428.1| putative metalloprotease [Vibrio parahaemolyticus Peru-466]
 gi|31077048|sp|Q87RP6|RRMF_VIBPA RecName: Full=Probable rRNA maturation factor
 gi|28805717|dbj|BAC58994.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308087470|gb|EFO37165.1| putative metalloprotease [Vibrio parahaemolyticus Peru-466]
 gi|308090264|gb|EFO39959.1| putative metalloprotease [Vibrio parahaemolyticus AN-5034]
 gi|308114631|gb|EFO52171.1| putative metalloprotease [Vibrio parahaemolyticus K5030]
 gi|328472486|gb|EGF43349.1| metal-binding heat shock protein [Vibrio parahaemolyticus 10329]
          Length = 154

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVEN     E  L +  +          + K   + +   E+++   D      
Sbjct: 4   ELDLQLAVEN-----EEGLPSQQDFQL------WLDKTIPLFQPQAEVTIRIVDEKESHA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHEYRGKDKPTNVLSFP--FEAPPGMEIDLLGDLIICRQVVEKEAIEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPYIAE 152


>gi|88798162|ref|ZP_01113748.1| hypothetical protein MED297_12927 [Reinekea sp. MED297]
 gi|88778938|gb|EAR10127.1| hypothetical protein MED297_12927 [Reinekea sp. MED297]
          Length = 163

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 61/168 (36%), Positives = 84/168 (50%), Gaps = 14/168 (8%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +    LDLQIA +      E   R              +S      +  VE+S+    + 
Sbjct: 1   MTELTLDLQIATDAENIPAEASFRQW------------VSAALSGYDREVEMSIRVVSAE 48

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
             + LN  YRG DKPTNVLSFP        D     +LGD+V+   ++E EA    K   
Sbjct: 49  ESQDLNATYRGKDKPTNVLSFPFEAPPGVADAGIDRLLGDLVICAPVVEEEAQAQRKHLS 108

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +H  H+++HG LHLLGYDH++D +A  ME  ER+IL  L I DPY+ +
Sbjct: 109 HHWAHMVVHGTLHLLGYDHIEDDEAEQMEQAERTILAALSIPDPYQGE 156


>gi|325578691|ref|ZP_08148767.1| metal-dependent hydrolase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159730|gb|EGC71861.1| metal-dependent hydrolase [Haemophilus parainfluenzae ATCC 33392]
          Length = 154

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +DLQ+A EN      E  +                      + + VE+++   D      
Sbjct: 6   IDLQLACENTEGLPSEEQILQWATAAVQ------------PESDNVEMTVRIVDKAESHD 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H+
Sbjct: 54  LNLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAIEQEKPLMAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I+HG LHLLGYDH++D +A  ME LE  I++ LG  DPY
Sbjct: 112 IVHGSLHLLGYDHIEDDEAEEMESLETEIMQGLGFADPY 150


>gi|301155988|emb|CBW15458.1| conserved protein [Haemophilus parainfluenzae T3T1]
          Length = 154

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 15/159 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +DLQ+A EN      E  +                      + + VE+++   D      
Sbjct: 6   IDLQLASENTEGLPSEAQILQWATAAVQ------------PESDNVEMTVRIVDEAESHD 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H+
Sbjct: 54  LNLTYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAIEQEKPLMAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I+HG LHLLGYDH+DD +A  ME LE  I++ LG  DPY
Sbjct: 112 IVHGSLHLLGYDHIDDDEAEEMESLETEIMQGLGFADPY 150


>gi|285018848|ref|YP_003376559.1| hypothetical protein XALc_2084 [Xanthomonas albilineans GPE PC73]
 gi|283474066|emb|CBA16567.1| hypothetical protein XALc_2084 [Xanthomonas albilineans]
          Length = 161

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 53/137 (38%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SD 94
           A +    ++     +    +L++   D      LN  YRG D  TNVLSFP         
Sbjct: 24  ATSFRKWVAVALKGRIREADLAIRLVDQREGRALNQHYRGKDYATNVLSFPAELPDGLPK 83

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
           G    +LGD+V+   ++  EA   GK    H  HL +HG LHLLG+DH DDK+A  ME L
Sbjct: 84  GIRLPLLGDLVICAPVVAREAAEQGKPLNAHYAHLTVHGVLHLLGWDHEDDKEAEAMEQL 143

Query: 155 ERSILEDLGINDPYEVD 171
           ER IL +LG++DPY  +
Sbjct: 144 ERQILGELGLSDPYAGE 160


>gi|292487619|ref|YP_003530491.1| putative metalloprotease ybeY [Erwinia amylovora CFBP1430]
 gi|292898857|ref|YP_003538226.1| hypothetical protein EAM_1139 [Erwinia amylovora ATCC 49946]
 gi|291198705|emb|CBJ45814.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|291553038|emb|CBA20083.1| putative metalloprotease ybeY [Erwinia amylovora CFBP1430]
 gi|312171726|emb|CBX79984.1| putative metalloprotease ybeY [Erwinia amylovora ATCC BAA-2158]
          Length = 155

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           +    LDLQ+A E+      E   +   E V  +             ++  E+++   D 
Sbjct: 1   MTQVILDLQLACESQQGLPTEADFQRWLEAVLPQ------------FQSESEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG +KPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHHLNHTYRGKEKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEHEAAEQEKALEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H++IHG LHLLGYDH+ D +A  ME LE  I+  LG  DPY
Sbjct: 107 HWAHMVIHGSLHLLGYDHIVDDEAEEMESLETEIMLALGYPDPY 150


>gi|119477444|ref|ZP_01617635.1| hypothetical protein GP2143_00682 [marine gamma proteobacterium
           HTCC2143]
 gi|119449370|gb|EAW30609.1| hypothetical protein GP2143_00682 [marine gamma proteobacterium
           HTCC2143]
          Length = 166

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 81/166 (48%), Gaps = 14/166 (8%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +    +DLQIA E+             +   A              +  VEL++   D  
Sbjct: 1   MTTVAVDLQIASEDDDHPPPASFEQWVQAAVA------------SHQENVELTVRIVDEE 48

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
             + LN  YRGI+KPTNVLSFP      D     +LGD+++   ++  EA    K    H
Sbjct: 49  ESQYLNDRYRGINKPTNVLSFPADL--PDHIDIPLLGDLIICAPVVAQEAKAQNKPCLCH 106

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH+DD DA  ME LE  IL  L I +PY ++
Sbjct: 107 WAHMVVHGTLHLLGYDHIDDHDAEEMEALEVKILASLEIANPYSIN 152


>gi|218889735|ref|YP_002438599.1| putative metalloprotease [Pseudomonas aeruginosa LESB58]
 gi|226696066|sp|B7V9D4|RRMF_PSEA8 RecName: Full=Probable rRNA maturation factor
 gi|218769958|emb|CAW25720.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
          Length = 160

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 77/162 (47%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A        E   R  CE+   +                 EL++   D      
Sbjct: 4   ELDLQVASAAPDLPSEAQFRAWCELALRQR-------------PESELTIRLVDEAEGLE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSF  A    +     +LGD+V+   ++  EA    K  + H  HL
Sbjct: 51  LNSTYRHKDYATNVLSF-LADVPDELLDIPLLGDLVICAPVVAREALEQRKPLQAHWAHL 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 110 VIHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 151


>gi|304413111|ref|ZP_07394584.1| hypothetical protein REG_0098 [Candidatus Regiella insecticola
           LSR1]
 gi|304283954|gb|EFL92347.1| hypothetical protein REG_0098 [Candidatus Regiella insecticola
           LSR1]
          Length = 177

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 13/159 (8%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQI    N     E +  +  E +  K          F   +  E+++   D      
Sbjct: 29  LDLQIVCTHNKKLPTEANFNSWLEAIQVK----------FQSLSEAEMTIRLVDEAESRQ 78

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LNF YR  DKPTNVLSFP+        +   LGD+V+  +++E EA    K    H  H+
Sbjct: 79  LNFIYRDKDKPTNVLSFPSTLPEE--INLPWLGDLVICRQVVEREAVEQNKTLLAHWAHM 136

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HG LHLLGYDH+ D++A  ME LE  IL+ LG  D Y
Sbjct: 137 VVHGTLHLLGYDHITDEEAQEMESLETDILQTLGYPDAY 175


>gi|70732739|ref|YP_262502.1| putative metalloprotease [Pseudomonas fluorescens Pf-5]
 gi|123652712|sp|Q4K5I1|RRMF_PSEF5 RecName: Full=Probable rRNA maturation factor
 gi|68347038|gb|AAY94644.1| conserved hypothetical protein TIGR00043 [Pseudomonas fluorescens
           Pf-5]
          Length = 152

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ A +     DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQRASQQPAPSDE-QFRQWCELALRQRTAD------------SELTIRLVDEAEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA   GKE + H  HL
Sbjct: 50  LNHTWRHKDYATNVLSFP-ADVPDELLDIPLLGDLVICIAVVEREAAEQGKELQAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD +A  ME LER++L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDDEAEEMEALERTLLAELGHPDPYADD 150


>gi|94501474|ref|ZP_01307993.1| hypothetical protein RED65_05912 [Oceanobacter sp. RED65]
 gi|94426439|gb|EAT11428.1| hypothetical protein RED65_05912 [Oceanobacter sp. RED65]
          Length = 154

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 14/161 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +D+QIA+E         L++      A                  ELS+   D+   ++
Sbjct: 3   DVDVQIAIEGDNLPTPTQLQSWVTAALA------------SLRPEAELSIRLVDNSESQS 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           LN EYRG DKPTNVLSFP        +  +  ++GD+V+ + ++  EA    K  E+H  
Sbjct: 51  LNHEYRGKDKPTNVLSFPFEIPPELAEIENFTLIGDLVICHPVVCQEAAEQKKPLEHHYA 110

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H++IHG LHLLGYDH+++ +A  ME LE  IL  L I DPY
Sbjct: 111 HMVIHGCLHLLGYDHINEDEAEEMERLETDILATLNIPDPY 151


>gi|293391337|ref|ZP_06635671.1| putative metalloprotease in flp 5' region [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951871|gb|EFE01990.1| putative metalloprotease in flp 5' region [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 154

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA       DE  L T      A  +    +     +   +E+++   D      L
Sbjct: 6   IDLQIAS-----ADESGLPT------AAQIEQWATAAVQPQSGEIEMTVRIVDETESHAL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NLNYRGKDRPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAQEQEKPLMAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMIGLGFVDPY 150


>gi|153835655|ref|ZP_01988322.1| conserved hypothetical protein [Vibrio harveyi HY01]
 gi|156973537|ref|YP_001444444.1| putative metalloprotease [Vibrio harveyi ATCC BAA-1116]
 gi|269961559|ref|ZP_06175921.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|166228922|sp|A7N1G7|RRMF_VIBHB RecName: Full=Probable rRNA maturation factor
 gi|148867723|gb|EDL66985.1| conserved hypothetical protein [Vibrio harveyi HY01]
 gi|156525131|gb|ABU70217.1| hypothetical protein VIBHAR_01228 [Vibrio harveyi ATCC BAA-1116]
 gi|269833600|gb|EEZ87697.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 154

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 15/163 (9%)

Query: 10  RLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQ+AVEN      E   +   +                + +   EL++   D     
Sbjct: 4   ELDLQLAVENEEGLPSEQDFQLWLDKTIP------------LFQPQAELTIRIVDEQESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F    G    +LGD+++  +++E EA    K    H  H
Sbjct: 52  ELNHEYRGKDKPTNVLSFP--FEVPPGMEMDLLGDLIICRQVVEKEAVEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETEIMQGMGYEDPYIAE 152


>gi|149377494|ref|ZP_01895235.1| predicted metal-dependent hydrolase [Marinobacter algicola DG893]
 gi|149358186|gb|EDM46667.1| predicted metal-dependent hydrolase [Marinobacter algicola DG893]
          Length = 157

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 15/166 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   +DLQ AVE     +++         +             + EN  E+++    S 
Sbjct: 1   MSELTVDLQRAVEAPGVPEDVEFERWARAAW-------------LGENPSEVTIRIVASD 47

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN +YRG   PTNVLSFP  F +  G +  + GD+++   ++E EA    K  + H
Sbjct: 48  ESADLNSQYRGKSGPTNVLSFP--FEAPAGITVPLAGDLIICAPVVEKEATEQQKTLKEH 105

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHL GYDH++D DA VME LE  +L  LG ++PYE +
Sbjct: 106 WAHMVVHGMLHLQGYDHIEDNDAEVMEALEIRLLGQLGFSNPYETE 151


>gi|288942384|ref|YP_003444624.1| hypothetical protein Alvin_2683 [Allochromatium vinosum DSM 180]
 gi|288897756|gb|ADC63592.1| protein of unknown function UPF0054 [Allochromatium vinosum DSM
           180]
          Length = 178

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/164 (38%), Positives = 81/164 (49%), Gaps = 10/164 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E+A                A+            +    EL++   D    + 
Sbjct: 6   ELDLQVATEDADHPLPPRFERWVRAALAQV-------DPPFQRARAELTIRLVDPDESQA 58

Query: 70  LNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN +YRG DKPTNVLSFP         D     +LGD+V+  E++  EA   GK  E H 
Sbjct: 59  LNLQYRGRDKPTNVLSFPFEAPPGLDADDPIHDLLGDLVICTEVVRREALEQGKTPEAHW 118

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            H+++HG LHLL YDHV D +A VME LE +IL  LG   PYE 
Sbjct: 119 AHMVVHGVLHLLDYDHVTDAEAAVMETLETAILGGLGFPPPYED 162


>gi|83648012|ref|YP_436447.1| metal-dependent hydrolase [Hahella chejuensis KCTC 2396]
 gi|123531265|sp|Q2SBF2|RRMF_HAHCH RecName: Full=Probable rRNA maturation factor
 gi|83636055|gb|ABC32022.1| predicted metal-dependent hydrolase [Hahella chejuensis KCTC 2396]
          Length = 156

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 15/162 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +D+QIA E A    E  L    +                 +    E+++   D+     
Sbjct: 4   DVDIQIASEEADLPSEEQLILWAQAALR-------------ETGDREVTIRIVDAEESRE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G +  +LGD+V+   ++  EA    K    H  H+
Sbjct: 51  LNAQYRGKDKPTNVLSFP--FENPPGLTLPLLGDLVICAPVVFNEAVEQQKTAAAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHL GYDH+ D++A VME LE  ++  LG   PY  +
Sbjct: 109 VIHGMLHLQGYDHIIDEEAEVMESLETELVTSLGFPPPYATN 150


>gi|212636646|ref|YP_002313171.1| putative metalloprotease [Shewanella piezotolerans WP3]
 gi|226706243|sp|B8CSF8|RRMF_SHEPW RecName: Full=Probable rRNA maturation factor
 gi|212558130|gb|ACJ30584.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 156

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 14/160 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE         +    +     ++            +  EL++   D    + 
Sbjct: 9   ELDLQVAVEGVELPSVQEMELWVKTALRDSM------------DQAELTIRIVDVAESQM 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+   +++ EA    K    H  H+
Sbjct: 57  LNSTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLVVCAAVVKQEAIDQNKPLNAHWAHM 114

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HG LHLLGYDH++D +A  ME LE  ++E LG N+PY+
Sbjct: 115 VVHGCLHLLGYDHIEDIEAEEMESLETQLIESLGYNNPYQ 154


>gi|152979599|ref|YP_001345228.1| putative metalloprotease [Actinobacillus succinogenes 130Z]
 gi|171704389|sp|A6VQP6|RRMF_ACTSZ RecName: Full=Probable rRNA maturation factor
 gi|150841322|gb|ABR75293.1| protein of unknown function UPF0054 [Actinobacillus succinogenes
           130Z]
          Length = 156

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/161 (37%), Positives = 86/161 (53%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQI  E     D+ +L T  +  F +  +  +           E+++   D      L
Sbjct: 7   IDLQIVSE-----DQTNLPTPEQ--FTQWATAAVRAEALEP----EITIRIVDEAESHDL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D+PTNVLSFP  F   +     +LGD+V+  +++E EA   GK    H  H++
Sbjct: 56  NLTYRGKDRPTNVLSFP--FECPEEVELPLLGDLVICRQVVEREAEQQGKPLPAHWAHMV 113

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I+ +LG  DPY  D
Sbjct: 114 VHGCLHLLGYDHIEDDEAVEMESLETQIMTELGFEDPYSYD 154


>gi|261867460|ref|YP_003255382.1| putative metalloprotease [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|46577549|sp|Q9JRS8|RRMF_AGGAC RecName: Full=Probable rRNA maturation factor
 gi|8096199|dbj|BAA96100.1| unnamed protein product [Actinobacillus actinomycetemcomitans]
 gi|261412792|gb|ACX82163.1| putative metalloprotease in flp 5' region [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 154

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA       DE  L T      A  +    +     +   VE+++   D      L
Sbjct: 6   IDLQIAS-----ADESGLPT------AAQIEQWATAAVQPQSGEVEMTVRIVDETESHAL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           NF YRG D PTNVLSFP  F   D     +LGD+V+  +++E EA    K    H  H++
Sbjct: 55  NFNYRGKDHPTNVLSFP--FECPDEVELPLLGDLVICRQVVEREAQEQEKPLIAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMESLETQIMMGLGFVDPY 150


>gi|299133382|ref|ZP_07026577.1| protein of unknown function UPF0054 [Afipia sp. 1NLS2]
 gi|298593519|gb|EFI53719.1| protein of unknown function UPF0054 [Afipia sp. 1NLS2]
          Length = 164

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 75/161 (46%), Positives = 90/161 (55%), Gaps = 7/161 (4%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
            P  D+ IA     W  +     + +   A A S +      +     E++++ TD  RI
Sbjct: 4   PPTADVLIA--ADCWQAQADAEAVIQRAIAAAASFV-----ELPAEDTEVAVMLTDDARI 56

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN E+R  DK TNVLSFP A         LMLGDI +AYE    EA   GK F+NHL 
Sbjct: 57  RELNKEWRDQDKATNVLSFPAAQPPGATPQPLMLGDIAIAYETTRFEAETEGKPFQNHLS 116

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HL IHGFLHLLGYDH+DD +A  MEGLER IL  LGI DPY
Sbjct: 117 HLAIHGFLHLLGYDHLDDDEAEEMEGLERDILAKLGIADPY 157


>gi|254521495|ref|ZP_05133550.1| conserved hypothetical protein TIGR00043 [Stenotrophomonas sp.
           SKA14]
 gi|219719086|gb|EED37611.1| conserved hypothetical protein TIGR00043 [Stenotrophomonas sp.
           SKA14]
          Length = 156

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/163 (38%), Positives = 85/163 (52%), Gaps = 10/163 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L +AV  AL    +       V F K V+  +      +    +L++   D+   ++L
Sbjct: 1   MRLDVAVNYALPRTGLP----AAVSFRKWVAAALK----GRIREADLAIRVVDAKEGQSL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N  YRG D  TNVLSFP         G    +LGD+V+   ++  EA+  GK    H  H
Sbjct: 53  NRHYRGKDYATNVLSFPAELPEGLPKGVKFPLLGDLVICAPVVAREADEQGKALNAHYAH 112

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           L +HG LHLLG+DH DDK+A  ME LER IL +LGI DPY  +
Sbjct: 113 LTVHGVLHLLGWDHEDDKEAEAMEQLEREILAELGIADPYAGE 155


>gi|49080770|gb|AAT50056.1| PA3982 [synthetic construct]
          Length = 161

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 78/162 (48%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A        E   R  CE+   +                 EL++   D      
Sbjct: 4   ELDLQVASAAPDLPSEAQFRAWCELALRQR-------------PESELTIRLVDEAEGLE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TN+LSFP A    +     +LGD+V+   ++  EA    K  + H  HL
Sbjct: 51  LNSTYRHKDYATNLLSFP-ADVPDELLDIPLLGDLVICAPVVAREALEQRKPLQAHWAHL 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD +A  ME LER +L +LG  DPY  D
Sbjct: 110 VIHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACD 151


>gi|260767224|ref|ZP_05876165.1| predicted metal-dependent hydrolase [Vibrio furnissii CIP 102972]
 gi|260617732|gb|EEX42910.1| predicted metal-dependent hydrolase [Vibrio furnissii CIP 102972]
 gi|315180849|gb|ADT87763.1| hypothetical protein vfu_A02642 [Vibrio furnissii NCTC 11218]
          Length = 154

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 83/162 (51%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A        E  L T       +  +  +       +   E+++   D      
Sbjct: 4   ELDLQLA-----AASEDGLPT------REQFATWLQTAIVPFQPQAEVTIRIVDEPESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DK TNVLSFP  F +  G    +LGD+V+  +++E EA    K    H  H+
Sbjct: 53  LNLEYRGKDKSTNVLSFP--FEAPPGIEMDLLGDLVICRQVVEREAVEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I++ +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMQTMGFEDPYLAE 152


>gi|157962956|ref|YP_001502990.1| putative metalloprotease [Shewanella pealeana ATCC 700345]
 gi|189039823|sp|A8H7B8|RRMF_SHEPA RecName: Full=Probable rRNA maturation factor
 gi|157847956|gb|ABV88455.1| protein of unknown function UPF0054 [Shewanella pealeana ATCC
           700345]
          Length = 156

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LD+Q+AVE      +  L    +      +S              EL++   D    + 
Sbjct: 9   DLDVQVAVEGFELPSQAELELWVKTALRDTMSE------------AELTIRIVDVEESQE 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+   ++E EA    K    H  H+
Sbjct: 57  LNMTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLVICAAVVEQEAIDQNKPLLAHWAHM 114

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HG LHLLGYDH++D +A  ME LE  ++E LG  +PY+
Sbjct: 115 VVHGCLHLLGYDHIEDVEAEEMESLETQLIESLGYINPYK 154


>gi|319898346|ref|YP_004158439.1| hypothetical protein BARCL_0168 [Bartonella clarridgeiae 73]
 gi|319402310|emb|CBI75849.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 158

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 5/159 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + + +E+A WGDE  L  + E      + +L      + E   ELSL+FTD   +  
Sbjct: 1   MIAIDMTIESAKWGDEKMLYNITEKALTTTLQHLS-----LNEVRSELSLLFTDDKHMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N ++R  +K TNVLSFP+    +     LMLGDI++A E I  EA    K F++HL H+
Sbjct: 56  INAQWRHQNKSTNVLSFPSFPLKAGQNPGLMLGDIIIAQETIMREAEEEKKSFQDHLTHI 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IIHG LHLLGY+H  + +A  ME LER IL+ L I DPY
Sbjct: 116 IIHGILHLLGYNHETNDEANQMEKLEREILQKLSIKDPY 154


>gi|260774883|ref|ZP_05883784.1| predicted metal-dependent hydrolase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609138|gb|EEX35296.1| predicted metal-dependent hydrolase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 156

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+AVE     DE  L +      ++ V   ++      +   E+++   D      
Sbjct: 4   ELDLQLAVE-----DEKGLPS------SEDVHLWLTSAVAKFQPQAEVTVRIVDEQESHQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA+   K    H  H+
Sbjct: 53  LNHDYRGKDKPTNVLSFP--FEAPPGIEMDLLGDLIICRQVVEQEADQQSKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I+  +G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMESLETEIMLGMGFEDPYIAE 152


>gi|194365130|ref|YP_002027740.1| putative metalloprotease [Stenotrophomonas maltophilia R551-3]
 gi|238693470|sp|B4SQK2|RRMF_STRM5 RecName: Full=Probable rRNA maturation factor
 gi|194347934|gb|ACF51057.1| protein of unknown function UPF0054 [Stenotrophomonas maltophilia
           R551-3]
          Length = 161

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 10/161 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +A+  AL    +       V F K V+  +      +    +L++   D+   ++LN 
Sbjct: 8   LDVAISYALPRAGLP----AAVSFRKWVAAALK----GRIREADLAIRVVDAKEGQSLNR 59

Query: 73  EYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
            YRG D  TNVLSFP         G    +LGD+V+   ++  EA+  GK    H  HL 
Sbjct: 60  HYRGKDYATNVLSFPADVPEGLPKGVKFPLLGDLVICAPVVAREADEQGKALNAHYAHLT 119

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLG+DH DDK+A  ME LER IL +LGI DPY  +
Sbjct: 120 VHGVLHLLGWDHEDDKEAEAMEQLEREILAELGIADPYAGE 160


>gi|114319557|ref|YP_741240.1| hypothetical protein Mlg_0396 [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312505|sp|Q0ABN7|RRMF_ALHEH RecName: Full=Probable rRNA maturation factor
 gi|114225951|gb|ABI55750.1| protein of unknown function UPF0054 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 166

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 64/171 (37%), Positives = 85/171 (49%), Gaps = 7/171 (4%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M+    + P LDL++      +          E  F + VS  ++ G         L++ 
Sbjct: 1   MTAAVNDAPALDLEV-----QYVVAWRAGLPPEAAFRRWVSAALAAGGHTGPAA--LAVR 53

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D      LN +YRG D PTNVLSFP             LGD+V+   ++E EA   GK
Sbjct: 54  VVDKAEGRRLNHDYRGRDYPTNVLSFPFEAPPGLDEPLPELGDLVICAPVVEREAREQGK 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +H  HL++HG LHLLGYDH   ++A  MEGLER IL  LGI DPY +D
Sbjct: 114 PEADHWAHLVVHGVLHLLGYDHEAAEEAEAMEGLERRILAGLGIADPYRLD 164


>gi|49475036|ref|YP_033077.1| hypothetical protein BH02240 [Bartonella henselae str. Houston-1]
 gi|59799036|sp|Q6G4V8|RRMF_BARHE RecName: Full=Probable rRNA maturation factor
 gi|49237841|emb|CAF27036.1| hypothetical protein BH02240 [Bartonella henselae str. Houston-1]
          Length = 158

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 63/160 (39%), Positives = 91/160 (56%), Gaps = 5/160 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + I VE+  W DE  L  + E      + +L  +       + E+SL+FTD   +  
Sbjct: 1   MITIDILVESDGWNDEKMLYNITEKALKTIMHHLSLENV-----VSEISLLFTDDKHMAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N ++RG +K TNVLSFP            MLGDI++A E + +EA    K F++HL H+
Sbjct: 56  INAQWRGKNKSTNVLSFPAFPLKVGDSPGPMLGDIIIARETVVLEAENEAKSFQDHLTHM 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           I+HG LHLLGY+H  +++A  ME LER IL+ L I DPY 
Sbjct: 116 IVHGILHLLGYNHETNEEASHMEELERKILQKLSIKDPYA 155


>gi|312963221|ref|ZP_07777705.1| metalloprotease [Pseudomonas fluorescens WH6]
 gi|311282487|gb|EFQ61084.1| metalloprotease [Pseudomonas fluorescens WH6]
          Length = 152

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 14/163 (8%)

Query: 10  RLDLQIAVENALW-GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            L+L + +E+      E   R  C +   +  ++             EL++   D     
Sbjct: 1   MLELDLQLESTKPAPSEARFREWCALALRQRTAD------------SELTIRLVDEPEGR 48

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA   GK  E H  H
Sbjct: 49  ELNRTWRQKDYATNVLSFP-ADVPDELLDIPLLGDLVICVAVVEREAKEQGKALEAHWAH 107

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           L+IHG LHLLGYDH+DD +A  ME LER++L +LG  DPY  D
Sbjct: 108 LVIHGCLHLLGYDHIDDDEAEEMEALERTLLAELGHPDPYADD 150


>gi|330445219|ref|ZP_08308871.1| conserved protein involved in translation [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489410|dbj|GAA03368.1| conserved protein involved in translation [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 154

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ A E+             E  F + +   ++      +   E+++   D      L
Sbjct: 5   LDLQYATESQDGLP-------TEAEFQQWLDAAVTP----FQADAEVTIRLVDEADSHEL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N EYRG D+PTNVLSFP  F +  G    +LGD+++  +++E EA    K  + H  H++
Sbjct: 54  NLEYRGKDRPTNVLSFP--FEAPPGIELELLGDLIICRQVVEKEALEQNKPLKAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D +A  MEGLE  I++++G  DPY
Sbjct: 112 VHGSLHLLGYDHIEDDEAEEMEGLETEIMQNMGFVDPY 149


>gi|218658441|ref|ZP_03514371.1| hypothetical protein RetlI_01597 [Rhizobium etli IE4771]
          Length = 127

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 62/114 (54%), Positives = 80/114 (70%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+SLVFTD   I+ +N E+RG DK TNVLSFP            MLGDI++A E +E EA
Sbjct: 6   EVSLVFTDDASIQDINAEWRGKDKATNVLSFPAFPVKPGKMPGPMLGDIIIARETVEREA 65

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           + L K  ++HL HL++HGFLHLLGYDH++  +A +MEGLE  IL  LG++DPYE
Sbjct: 66  HELEKSLDDHLTHLLVHGFLHLLGYDHMNSTEAEIMEGLETRILAQLGLSDPYE 119


>gi|325920327|ref|ZP_08182264.1| hypothetical protein TIGR00043 [Xanthomonas gardneri ATCC 19865]
 gi|325549189|gb|EGD20106.1| hypothetical protein TIGR00043 [Xanthomonas gardneri ATCC 19865]
          Length = 166

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 65/173 (37%), Positives = 87/173 (50%), Gaps = 10/173 (5%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M V  +    + L +AV  AL    +       V F K V+  +      +    +L++ 
Sbjct: 1   MLVFPMTKGPIRLDVAVSYALPRAGLPSA----VSFRKWVAAALK----GRIREADLAVR 52

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVL 118
             D     +LN  YRG D  TNVLSFP         G    +LGD+V+   ++  EA   
Sbjct: 53  IVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLPKGVKMPLLGDLVICAPVVAREAAEQ 112

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +H  HL +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY  +
Sbjct: 113 GKSLASHYAHLTVHGTLHLLGWDHADDKEADAMEQLEREILADLGIDDPYAGE 165


>gi|323259260|gb|EGA42903.1| metal-binding heat shock protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
          Length = 146

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F + +  +I +     +   E+++   D      LN  YRG DKPTNVLSFP  F 
Sbjct: 9   DEAQFQRWLDGVIPQ----FQEEAEVTIRLVDEAESHDLNLTYRGKDKPTNVLSFP--FE 62

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           +  G    +LGD+++  +++E EA    K  E H  H+++HG LHLLGYDH+DD +A  M
Sbjct: 63  APPGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEM 122

Query: 152 EGLERSILEDLGINDPYEVD 171
           E LE  I+  +G  DPY  +
Sbjct: 123 ESLETEIMLAMGYEDPYIAE 142


>gi|88860581|ref|ZP_01135219.1| hypothetical protein PTD2_16192 [Pseudoalteromonas tunicata D2]
 gi|88817779|gb|EAR27596.1| hypothetical protein PTD2_16192 [Pseudoalteromonas tunicata D2]
          Length = 152

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 14/164 (8%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +  LDLQIA E          +                    + +   EL++   D    
Sbjct: 1   MTELDLQIASEFKDLPSFEQFQLWAHSTLD------------LFKEESELTIRIADEAES 48

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           + LN +YRG +KPTNVLSFP  F +  G    ++GD+++  +++  EA    K F +H  
Sbjct: 49  QQLNNDYRGKNKPTNVLSFP--FEAPPGIELPLVGDLIICPQVVYQEALEQEKSFHDHFA 106

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H+++HG LHLLG+DH++ +DA  ME  E+ IL  LGI+DPY  D
Sbjct: 107 HMVVHGCLHLLGFDHIEAEDAEEMESNEKEILAKLGISDPYRDD 150


>gi|209883672|ref|YP_002287529.1| putative metalloprotease [Oligotropha carboxidovorans OM5]
 gi|209871868|gb|ACI91664.1| putative metalloprotease [Oligotropha carboxidovorans OM5]
          Length = 167

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 73/164 (44%), Positives = 91/164 (55%), Gaps = 10/164 (6%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
            P  D+ IA     W  E    ++ +   A A + +      +     EL+++ TD   I
Sbjct: 4   PPTADVLIA--ADCWKAEAEAESIVQNAIATAATFVT-----LPAEATELAVMLTDDASI 56

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
             LN E+RG DKPTNVLSFP A    +       LMLGDI +AYE    EA    K F +
Sbjct: 57  RDLNREWRGQDKPTNVLSFPAAPLPGNTTQDGVPLMLGDIAIAYETTRREAETDAKPFPH 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HL HL +HGFLHLLGYDH++D +A VME LER IL  LGI DPY
Sbjct: 117 HLSHLAVHGFLHLLGYDHIEDSEAEVMEELERRILAKLGIADPY 160


>gi|190573586|ref|YP_001971431.1| putative metalloprotease [Stenotrophomonas maltophilia K279a]
 gi|229553943|sp|B2FJ87|RRMF_STRMK RecName: Full=Probable rRNA maturation factor
 gi|190011508|emb|CAQ45126.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 161

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 10/161 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +A+  AL    +       V F + V+  +      +    +L++   D+   ++LN 
Sbjct: 8   LDVAISYALPRAGLP----AAVSFRRWVAAALK----GRIREADLAIRVVDAKEGQSLNR 59

Query: 73  EYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
            YRG D  TNVLSFP         G    +LGD+V+   ++  EA+  GK    H  HL 
Sbjct: 60  HYRGKDYATNVLSFPAEVPEGLPKGVKFPLLGDLVICAPVVAREADEQGKALNAHYAHLT 119

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLG+DH DDK+A  ME LER IL +LGI+DPY  +
Sbjct: 120 VHGVLHLLGWDHEDDKEAEAMEQLEREILAELGIDDPYAGE 160


>gi|126666979|ref|ZP_01737955.1| predicted metal-dependent hydrolase [Marinobacter sp. ELB17]
 gi|126628695|gb|EAZ99316.1| predicted metal-dependent hydrolase [Marinobacter sp. ELB17]
          Length = 158

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 61/164 (37%), Positives = 87/164 (53%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +N   LDLQ+  + A    E   R   ++ +               +   E+++   D  
Sbjct: 1   MNFVTLDLQLVSDAANIPSEDQFRQWSQLAWQ-------------GDEPTEVTIRIVDES 47

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            ++ LNF+YRG DKPTNVLSFP  F +  G   L+ GD+V+   I+  EA    K+   H
Sbjct: 48  EMQALNFQYRGKDKPTNVLSFP--FEAPAGIQILLAGDLVICAPIVAQEAREQYKDTHAH 105

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             H+IIHG LHL  YDH+DD +A  MEGLE  +L  +GI +PY+
Sbjct: 106 WAHMIIHGMLHLQSYDHIDDNEAEEMEGLEIRLLAQIGITNPYD 149


>gi|307545981|ref|YP_003898460.1| hypothetical protein HELO_3391 [Halomonas elongata DSM 2581]
 gi|307218005|emb|CBV43275.1| K07042 [Halomonas elongata DSM 2581]
          Length = 171

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 12/162 (7%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P +D Q+A+E      +  L      V ++             E   EL++ F D+    
Sbjct: 5   PDIDRQVALEVEDLPRQADLEAWVTGVLSR----------HPDETRHELTIRFVDAEESR 54

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN +YR  D+PTNVLSFP  F S    +  +LGD+V+ + ++  EA    K   +H  H
Sbjct: 55  HLNRDYRDRDRPTNVLSFP--FESPPTVALPLLGDLVICHPVVVDEAETQHKSLLDHYAH 112

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +++HG LHLLGYDH++D +A VME LER IL +LGI DPY  
Sbjct: 113 MVVHGTLHLLGYDHIEDDEAEVMEALEREILAELGIADPYAT 154


>gi|51595458|ref|YP_069649.1| metalloprotease [Yersinia pseudotuberculosis IP 32953]
 gi|153949147|ref|YP_001401879.1| metalloprotease [Yersinia pseudotuberculosis IP 31758]
 gi|186894489|ref|YP_001871601.1| putative metalloprotease [Yersinia pseudotuberculosis PB1/+]
 gi|59799101|sp|Q66DD5|RRMF_YERPS RecName: Full=Probable rRNA maturation factor
 gi|166988546|sp|A7FKV1|RRMF_YERP3 RecName: Full=Probable rRNA maturation factor
 gi|238691434|sp|B2K894|RRMF_YERPB RecName: Full=Probable rRNA maturation factor
 gi|51588740|emb|CAH20351.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|152960642|gb|ABS48103.1| conserved hypothetical protein TIGR00043 [Yersinia
           pseudotuberculosis IP 31758]
 gi|186697515|gb|ACC88144.1| protein of unknown function UPF0054 [Yersinia pseudotuberculosis
           PB1/+]
          Length = 157

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA  ++     E   +   E V              + + + E+++   D 
Sbjct: 1   MSQVILDLQIACADSQGLPTEGDFQRWLEAVLP------------LFQPVSEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA    K    
Sbjct: 49  AESHDLNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEKEAIEQEKALLA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH+DD +A  ME +E  I+  LG  DPY
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMELIETEIMHGLGYPDPY 150


>gi|254448604|ref|ZP_05062063.1| hypothetical protein GP5015_1989 [gamma proteobacterium HTCC5015]
 gi|198261793|gb|EDY86079.1| hypothetical protein GP5015_1989 [gamma proteobacterium HTCC5015]
          Length = 155

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 10/161 (6%)

Query: 10  RLDLQIAVENALW-GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           +LD+  +V+ A W   E  +R       A A++   S G  V    +EL L        +
Sbjct: 4   QLDIDPSVQGARWLPSEADVREWTSATLA-AITRSFSAGVEVSFKWLELEL-------SQ 55

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +LN +YRG D PTNVLSFP      DG    +LGDI +   ++E EA   GK    H  H
Sbjct: 56  SLNCDYRGKDSPTNVLSFPMQMPPIDG-ELELLGDIAICPAVVEREAGEQGKPLRAHWAH 114

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +++HG LHL GYDH++D +A  ME LER IL  LGI DPY 
Sbjct: 115 MVVHGMLHLCGYDHIEDTEALEMEALERDILASLGIEDPYR 155


>gi|21231768|ref|NP_637685.1| putative metalloprotease [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768106|ref|YP_242868.1| putative metalloprotease [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991236|ref|YP_001903246.1| putative metalloprotease [Xanthomonas campestris pv. campestris
           str. B100]
 gi|26006927|sp|Q8P8B2|RRMF_XANCP RecName: Full=Probable rRNA maturation factor
 gi|81305917|sp|Q4UVS5|RRMF_XANC8 RecName: Full=Probable rRNA maturation factor
 gi|229554360|sp|B0RRV9|RRMF_XANCB RecName: Full=Probable rRNA maturation factor
 gi|21113476|gb|AAM41609.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573438|gb|AAY48848.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732996|emb|CAP51194.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 161

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/138 (40%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--S 93
           F K V+  +      +    +L++   D     +LN  YRG D  TNVLSFP        
Sbjct: 27  FRKWVAAALK----GRIREADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAEMPQGLP 82

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
            G    +LGD+V+   ++  EA   GK    H  HL +HG LHLLG+DH DDK+A  ME 
Sbjct: 83  KGVKMPLLGDLVICAPVVAREAAEQGKSLSAHYAHLTVHGTLHLLGWDHEDDKEADAMEQ 142

Query: 154 LERSILEDLGINDPYEVD 171
           LER IL +LGI+DPY  +
Sbjct: 143 LEREILAELGIDDPYAGE 160


>gi|254251465|ref|ZP_04944783.1| hypothetical protein BDAG_00652 [Burkholderia dolosa AUO158]
 gi|124894074|gb|EAY67954.1| hypothetical protein BDAG_00652 [Burkholderia dolosa AUO158]
          Length = 270

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 78/162 (48%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  I    F   +  +L++ F       
Sbjct: 121 PELDLSV-----QYGDEIAPDVRKTLPKRKLIAEWIEPALF---SSAQLTVRFVGEEEGR 172

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN  YR  D PTNVL+F             ++GD+VL   ++E EA   GK  + H  H
Sbjct: 173 TLNAGYRHKDYPTNVLTFAY----DPAPDGTVIGDLVLCCPVVEKEAQEQGKPLDAHYAH 228

Query: 129 LIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY 
Sbjct: 229 LLVHGVLHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYR 270


>gi|209966241|ref|YP_002299156.1| hypothetical protein RC1_2976 [Rhodospirillum centenum SW]
 gi|209959707|gb|ACJ00344.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 226

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 35/187 (18%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +AVE+  W  E  L    E +   A    +++G  V +   ELS+V  D   + TLN +Y
Sbjct: 19  VAVESGGW--ETDLPD-AETLVLTAAEAALARGEGVPDGPAELSVVLADDATVRTLNRDY 75

Query: 75  RGIDKPTNVLSFPTAFASSD--------------------------------GCSSLMLG 102
           RG D+PTNVLSF       D                                    ++LG
Sbjct: 76  RGKDRPTNVLSFALYADGDDADTPPEGLEVEQDGPEGDIPGDDDAEDSLAQGDAPPVLLG 135

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           D++LAYE +  EA    K   +HL HL++HG LHLLGYDH+ D DA  ME LE  IL  L
Sbjct: 136 DVILAYETVVREAGEQNKPLADHLTHLVVHGVLHLLGYDHITDPDAERMERLETEILAGL 195

Query: 163 GINDPYE 169
           GI+DPY 
Sbjct: 196 GISDPYA 202


>gi|75674215|ref|YP_316636.1| hypothetical protein Nwi_0016 [Nitrobacter winogradskyi Nb-255]
 gi|123614405|sp|Q3SWQ7|RRMF_NITWN RecName: Full=Probable rRNA maturation factor
 gi|74419085|gb|ABA03284.1| Protein of unknown function [Nitrobacter winogradskyi Nb-255]
          Length = 190

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/159 (42%), Positives = 86/159 (54%), Gaps = 8/159 (5%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +I V    W  E       E V  +A++   +          EL+++ TD   I TLN  
Sbjct: 31  EILVVADCWRAEAG----AEAVIHRAIATA-AGMVDKDTGDAELAIMLTDDAGIRTLNAN 85

Query: 74  YRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           +RG+DKPTNVLSFP    +          MLGDI +AYE +  EA    K F++HL HL 
Sbjct: 86  WRGLDKPTNVLSFPALQPTGPCLPDDPPRMLGDIAIAYETLRREAGDERKTFDHHLSHLA 145

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HGFLHL+GYDH  D +A  ME LER IL  LGI DPY 
Sbjct: 146 VHGFLHLIGYDHETDGEAEEMESLERQILAQLGIPDPYA 184


>gi|58582392|ref|YP_201408.1| putative metalloprotease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624266|ref|YP_451638.1| putative metalloprotease [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|62901406|sp|Q5GZ48|RRMF_XANOR RecName: Full=Probable rRNA maturation factor
 gi|123521734|sp|Q2P263|RRMF_XANOM RecName: Full=Probable rRNA maturation factor
 gi|58426986|gb|AAW76023.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368206|dbj|BAE69364.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 161

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/163 (38%), Positives = 83/163 (50%), Gaps = 10/163 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L +AV  AL    +       V F K V+  +      +    +L++   D     +L
Sbjct: 6   IRLDVAVSYALPRAGLPSA----VSFRKWVAAALK----GRIREADLAVRLVDEKEGCSL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N  YRG D  TNVLSFP         G    +LGD+V+   ++  EA   GK    H  H
Sbjct: 58  NHHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVAREAAEQGKSLAAHYAH 117

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           L +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY  +
Sbjct: 118 LTVHGTLHLLGWDHDDDKEADAMEQLEREILADLGIDDPYAGE 160


>gi|224827049|ref|ZP_03700146.1| protein of unknown function UPF0054 [Lutiella nitroferrum 2002]
 gi|224600715|gb|EEG06901.1| protein of unknown function UPF0054 [Lutiella nitroferrum 2002]
          Length = 168

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/162 (33%), Positives = 69/162 (42%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L L I  + A       L+          V               ++SL+  +      
Sbjct: 18  ELTLDIRSDAADLPRAADLQRWARAALQADV------------QKAQISLLLVEGEEGRA 65

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG D  TNVLSF      +     L  GD+VL   ++  EA         H  HL
Sbjct: 66  LNRDYRGKDYATNVLSFALNEGETLPGMPLF-GDLVLCVPVVAREAAEQDTPLAAHYAHL 124

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            +HG LHL GYDH DD +A VME LE +IL  LG  DPY  +
Sbjct: 125 TVHGMLHLQGYDHEDDDEAEVMEALETAILAKLGYPDPYAAE 166


>gi|27375904|ref|NP_767433.1| hypothetical protein bll0793 [Bradyrhizobium japonicum USDA 110]
 gi|46577464|sp|Q89W99|RRMF_BRAJA RecName: Full=Probable rRNA maturation factor
 gi|27349042|dbj|BAC46058.1| bll0793 [Bradyrhizobium japonicum USDA 110]
          Length = 183

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/171 (40%), Positives = 94/171 (54%), Gaps = 9/171 (5%)

Query: 4   KKVNLPRLDL-QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           K ++ P L + ++ V    W  E     + +   A A  ++            E++++ T
Sbjct: 13  KTMSHPNLPMTEVLVVADCWQREPDSEAVIQRAVAAAAESVDE-----DVAEAEVAVMLT 67

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLG 119
           D   I TLN  +RGIDKPTNVLSFP      +   G +  MLGDI +AYE +  EA+   
Sbjct: 68  DDAGIRTLNSNWRGIDKPTNVLSFPALQPEGEWKEGDAPRMLGDIAIAYETMRREADEEK 127

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           K F++HL HL +HGFLHL+GYDH +D DA  ME LE  IL  LGI DPY  
Sbjct: 128 KPFDHHLSHLAVHGFLHLIGYDHENDDDAEEMEALETQILAHLGIPDPYAD 178


>gi|170718769|ref|YP_001783953.1| hypothetical protein HSM_0615 [Haemophilus somnus 2336]
 gi|238688012|sp|B0US54|RRMF_HAES2 RecName: Full=Probable rRNA maturation factor
 gi|168826898|gb|ACA32269.1| protein of unknown function UPF0054 [Haemophilus somnus 2336]
          Length = 154

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E+A      +L ++ ++          +     + +  E+++   D      L
Sbjct: 6   IDLQIASEDA-----TNLPSVEQIQL------WANAAIRAENSQPEMTVRIVDEEESHHL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F   D     ++GD+V+  +++E EA    K    H  H+I
Sbjct: 55  NLTYRGKDKPTNVLSFP--FECPDEIELPLIGDLVICRQVVEREATEQEKPLMAHWAHMI 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY ++
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMERLETEIMLSLGFTDPYIIE 153


>gi|21243197|ref|NP_642779.1| metalloprotease [Xanthomonas axonopodis pv. citri str. 306]
 gi|294624980|ref|ZP_06703631.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664274|ref|ZP_06729644.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|26006928|sp|Q8PJR6|RRMF_XANAC RecName: Full=Probable rRNA maturation factor
 gi|21108723|gb|AAM37315.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|292600702|gb|EFF44788.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605946|gb|EFF49227.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 161

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/138 (41%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--S 93
           F K V+  +      +    +L++   D     +LN  YRG D  TNVLSFP        
Sbjct: 27  FRKWVAAALK----GRIREADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLP 82

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
            G    +LGD+V+   ++  EA   GK    H  HL +HG LHLLG+DH DDK+A  ME 
Sbjct: 83  KGIKMPLLGDLVICAPVVAREAAEQGKSLAAHYAHLTVHGTLHLLGWDHEDDKEAEAMEQ 142

Query: 154 LERSILEDLGINDPYEVD 171
           LER IL DLGI+DPY  +
Sbjct: 143 LEREILADLGIDDPYAGE 160


>gi|113460492|ref|YP_718555.1| metal-dependent hydrolase [Haemophilus somnus 129PT]
 gi|123327121|sp|Q0I1E6|RRMF_HAES1 RecName: Full=Probable rRNA maturation factor
 gi|112822535|gb|ABI24624.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 154

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA E     D  +L ++ ++          +     + +  E+++   D      L
Sbjct: 6   IDLQIASE-----DVTNLPSVEQIQL------WANAAIRAENSQPEMTVRIVDEEESHHL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F   D     ++GD+V+  +++E EA    K    H  H+I
Sbjct: 55  NLTYRGKDKPTNVLSFP--FECPDEIELPLIGDLVICRQVVEREATEQEKPLMAHWAHMI 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D +A  ME LE  I+  LG  DPY ++
Sbjct: 113 VHGSLHLLGYDHIEDDEAEEMERLETEIMLSLGFTDPYIIE 153


>gi|325914749|ref|ZP_08177087.1| hypothetical protein TIGR00043 [Xanthomonas vesicatoria ATCC 35937]
 gi|325539026|gb|EGD10684.1| hypothetical protein TIGR00043 [Xanthomonas vesicatoria ATCC 35937]
          Length = 161

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/161 (39%), Positives = 81/161 (50%), Gaps = 10/161 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +AV  AL    +       V F K V+  +      +    +L++   D     +LN 
Sbjct: 8   LDVAVSYALPRAGLPSA----VSFRKWVAAALK----GRIREADLAVRVVDEKEGCSLNH 59

Query: 73  EYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
            YRG D  TNVLSFP         G    +LGD+V+   ++  EA   GK    H  HL 
Sbjct: 60  HYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVAREAAEQGKSLAAHYAHLT 119

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLG+DH DDK+A  ME LER IL DLGI DPY  +
Sbjct: 120 VHGTLHLLGWDHEDDKEADAMEQLEREILADLGIEDPYAGE 160


>gi|289671363|ref|ZP_06492438.1| putative metalloprotease [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 161

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/161 (39%), Positives = 82/161 (50%), Gaps = 10/161 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +AV  AL    +       V F K V+  +      +    +L++   D     +LN 
Sbjct: 8   LDVAVSYALPRAGLPSA----VSFRKWVAAALK----GRIREADLAVRVVDEKEGCSLNH 59

Query: 73  EYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
            YRG D  TNVLSFP         G    +LGD+V+   ++  EA   GK    H  HL 
Sbjct: 60  HYRGKDYATNVLSFPAELPKGLPQGIKMPLLGDLVICAPVVAREAAEQGKSLAAHYAHLT 119

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY  +
Sbjct: 120 VHGTLHLLGWDHEDDKEADAMEQLEREILADLGIDDPYAGE 160


>gi|152996922|ref|YP_001341757.1| hypothetical protein Mmwyl1_2911 [Marinomonas sp. MWYL1]
 gi|189039860|sp|A6VZE3|RRMF_MARMS RecName: Full=Probable rRNA maturation factor
 gi|150837846|gb|ABR71822.1| protein of unknown function UPF0054 [Marinomonas sp. MWYL1]
          Length = 154

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/160 (39%), Positives = 82/160 (51%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQIA E  A    E   R   E    +             +   E+++   D     
Sbjct: 5   ELDLQIATEETANLPSEADFRLWVEKALPEV------------DEEFEVTIRIVDEEESH 52

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP  F +  G    +LGD+V+  +I+  EA    KE  +H  H
Sbjct: 53  ALNHEYRGKDKPTNVLSFP--FEAPPGLELPLLGDLVICAQIVAKEAAEQNKELFHHWAH 110

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           + IHG LHL GYDH++D +A  ME +E  +L  L I+DPY
Sbjct: 111 MTIHGILHLRGYDHINDDEADEMESIETELLASLSISDPY 150


>gi|92115656|ref|YP_575385.1| hypothetical protein Nham_0023 [Nitrobacter hamburgensis X14]
 gi|122418988|sp|Q1QS72|RRMF_NITHX RecName: Full=Probable rRNA maturation factor
 gi|91798550|gb|ABE60925.1| protein of unknown function UPF0054 [Nitrobacter hamburgensis X14]
          Length = 190

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/159 (43%), Positives = 85/159 (53%), Gaps = 8/159 (5%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ V    W  E     +       A     +          EL+++ TD   I TLN  
Sbjct: 31  EVLVVAECWRAEAGAEAIIHRAVETA-----AGMVDTDTGDAELAIMLTDDAGIRTLNAN 85

Query: 74  YRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           +RGIDKPTNVLSFP      A S   +  MLGDI +AYE +  EA    K F++HL HL 
Sbjct: 86  WRGIDKPTNVLSFPALQPTGAPSPDDAPRMLGDIAIAYETLRREACDEHKPFDHHLSHLT 145

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           IHGFLHL+GYDH  D++A  ME LER IL  LGI DPY 
Sbjct: 146 IHGFLHLIGYDHETDEEAGEMENLERKILARLGIPDPYA 184


>gi|238897293|ref|YP_002922970.1| putative metal-dependent hydrolase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259585969|sp|C4K8I5|RRMF_HAMD5 RecName: Full=Probable rRNA maturation factor
 gi|229465048|gb|ACQ66822.1| putative metal-dependent hydrolase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 151

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 15/165 (9%)

Query: 6   VNLPRLDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           +N   LDLQIA  +N    +E   +              +S      +   E+++   D 
Sbjct: 1   MNQIILDLQIACVDNQGLPNENDFQLW------------LSSAISPFKKNAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LNF+YR IDKPTNVLSFP  F S       +LGD+++  +I+E EA +  K    
Sbjct: 49  IESRQLNFQYRQIDKPTNVLSFP--FISPVQVPLPLLGDLIICRQIVEKEAVLQKKALWA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           H  H+++HG LHLLGYDH+ + DA  ME +E  I+  LG  +PY+
Sbjct: 107 HWAHMVVHGALHLLGYDHILNDDAKKMESIETEIMMYLGYPNPYD 151


>gi|289665628|ref|ZP_06487209.1| putative metalloprotease [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 161

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/161 (39%), Positives = 82/161 (50%), Gaps = 10/161 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +AV  AL    +       V F K V+  +      +    +L++   D     +LN 
Sbjct: 8   LDVAVSYALPRAGLPSA----VSFRKWVAAALK----GRIREADLAVRVVDEKEGCSLNH 59

Query: 73  EYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
            YRG D  TNVLSFP         G    +LGD+V+   ++  EA   GK    H  HL 
Sbjct: 60  HYRGKDYATNVLSFPAKLPEGLPKGIKMPLLGDLVICAPVVAREAAEQGKSLAAHYAHLT 119

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY  +
Sbjct: 120 VHGTLHLLGWDHEDDKEADAMEQLEREILADLGIDDPYAGE 160


>gi|166711740|ref|ZP_02242947.1| hypothetical protein Xoryp_09845 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 161

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/163 (38%), Positives = 84/163 (51%), Gaps = 10/163 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L +AV  AL    +       V F K V+  +      +    +L++   D     +L
Sbjct: 6   IRLDVAVSYALPRAGLPSA----VSFRKWVAAALK----GRIREADLAVRVVDEKEGCSL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N+ YRG D  TNVLSFP         G    +LGD+V+   ++  EA   GK    H  H
Sbjct: 58  NYHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVAREAAEQGKSLAAHYAH 117

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           L +HG LHLLG+DH DDK+A  ME LER IL DLGI+DPY  +
Sbjct: 118 LTVHGTLHLLGWDHDDDKEADAMEQLEREILADLGIDDPYAGE 160


>gi|239996132|ref|ZP_04716656.1| hypothetical protein AmacA2_16882 [Alteromonas macleodii ATCC
           27126]
          Length = 158

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/155 (42%), Positives = 89/155 (57%), Gaps = 4/155 (2%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I V+ A  GDE  L  +      +  +N + K   + E   E+++ FTD    ++LN EY
Sbjct: 5   IDVQQAFEGDEAILSAIPSPSELELWANAVLKYEGLAEQ--EVTIRFTDEAESQSLNHEY 62

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           RG DKPTNVLSFP  F +  G    +LGD+V+   +I  EA    K+  NH  H+ +HG 
Sbjct: 63  RGKDKPTNVLSFP--FEAPPGIEINLLGDLVICAPVISREAEEQHKDVSNHYAHMTVHGL 120

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           LHL+GYDH+DD +A  ME  E  IL  LGI +PYE
Sbjct: 121 LHLMGYDHIDDAEAEEMESKEIDILAHLGIANPYE 155


>gi|188582642|ref|YP_001926087.1| hypothetical protein Mpop_3401 [Methylobacterium populi BJ001]
 gi|179346140|gb|ACB81552.1| protein of unknown function UPF0054 [Methylobacterium populi BJ001]
          Length = 161

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   +      E    +AV   ++         VE+S++  D   ++TLN
Sbjct: 5   EIDIAVEDARWEQAVP---DLEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQTLN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A        +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAADGPLQPGMARPLGDVVLAYDTLLRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYEV 170
           HG LHLLG DH   + +A  ME LE + L  LGI +PY+ 
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRTLGIPNPYDD 161


>gi|254562379|ref|YP_003069474.1| metalloprotease [Methylobacterium extorquens DM4]
 gi|254269657|emb|CAX25629.1| putative metalloprotease [Methylobacterium extorquens DM4]
          Length = 161

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   I      E    +AV   ++         VE+S++  D   ++ LN
Sbjct: 5   EIDIAVEDARWEQAIP---ELEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQELN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A   S    +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAAEQPSQPGVARPLGDVVLAYDTLVRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYEV 170
           HG LHLLG DH   + +A  ME LE + L  LG+ +PY+ 
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRALGVPNPYDD 161


>gi|163852621|ref|YP_001640664.1| hypothetical protein Mext_3206 [Methylobacterium extorquens PA1]
 gi|163664226|gb|ABY31593.1| protein of unknown function UPF0054 [Methylobacterium extorquens
           PA1]
          Length = 161

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   I      E    +AV   ++         VE+S++  D   ++ LN
Sbjct: 5   EIDIAVEDARWEQAIP---ELEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQELN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A   S    +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAAEQPSQPGLARPLGDVVLAYDTLVRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYEV 170
           HG LHLLG DH   + +A  ME LE + L  LG+ +PY+ 
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRALGVPNPYDD 161


>gi|119470864|ref|ZP_01613475.1| hypothetical protein ATW7_05976 [Alteromonadales bacterium TW-7]
 gi|119446091|gb|EAW27370.1| hypothetical protein ATW7_05976 [Alteromonadales bacterium TW-7]
          Length = 152

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E      E       +   ++              +  EL++V +D  + + 
Sbjct: 4   ELDLQIACEFDNLPSEAQFALWADKALSQ------------YRDESELTIVISDEAQSQQ 51

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG +KPTNVLSF   F +  G    ++GD+V+   I+  EA    K F +H  H+
Sbjct: 52  LNNDYRGKNKPTNVLSF--EFEAPPGIELPLVGDLVICPAIVLAEAVEQEKSFHDHFAHM 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLG+DH+  +DA  ME +E+ +L +L I DPY  +
Sbjct: 110 VIHGCLHLLGFDHIKSEDALQMESIEKQLLAELNIADPYRDE 151


>gi|170747071|ref|YP_001753331.1| hypothetical protein Mrad2831_0637 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170653593|gb|ACB22648.1| protein of unknown function UPF0054 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 159

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 4/159 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ +AVE+A W   +      E +  +AV   ++      +  VE+S++ TD   +  LN
Sbjct: 4   EIDLAVEDARWETAV---ADLEALVTRAVEAGLAVAPEKPDGPVEVSVLLTDDAAVRELN 60

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +RG DKPTNVLSFP A       +++ LGD+VLAYE +  E+    K  +NHL HL++
Sbjct: 61  RTWRGKDKPTNVLSFPAAPQPRHAGTAVPLGDVVLAYETLVRESAEQSKPLQNHLAHLLV 120

Query: 132 HGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
           HG LH LG DH + + +A  ME LE + L  LGI DPY 
Sbjct: 121 HGTLHCLGQDHEIGETEADAMEALEVAALATLGIPDPYA 159


>gi|77359990|ref|YP_339565.1| hypothetical protein PSHAa1044 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|123589178|sp|Q3IK77|RRMF_PSEHT RecName: Full=Probable rRNA maturation factor
 gi|76874901|emb|CAI86122.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 152

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E      E       +   ++              +  EL++V +D  + + 
Sbjct: 4   ELDLQIACEFDNLPSEAQFALWADKALSQ------------YRDESELTIVISDEAQSQQ 51

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG +KPTNVLSF   F +  G    ++GD+V+   I+  EA    K F +H  H+
Sbjct: 52  LNNDYRGKNKPTNVLSF--EFEAPPGIDIPLVGDLVICPAIVLAEAIEQEKSFHDHFAHM 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLG+DH+  +DA  ME +E+ +L +L I DPY  +
Sbjct: 110 VIHGCLHLLGFDHIKSEDAFEMESIEKQLLAELNIADPYRDE 151


>gi|307942737|ref|ZP_07658082.1| putative metalloprotease [Roseibium sp. TrichSKD4]
 gi|307773533|gb|EFO32749.1| putative metalloprotease [Roseibium sp. TrichSKD4]
          Length = 171

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 6/159 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L + +++E   WG    L+ LCE    +AV+  ++ G FV  +  ELS+V TD   I+ L
Sbjct: 10  LTIDLSIEAGDWGPLEPLKKLCE----RAVAETLASGLFVVPHS-ELSVVLTDDASIKVL 64

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R  DKPTNVLSFP +    D     +LGDIV+A E +  EA+ +G EF  HL HL 
Sbjct: 65  NNNWRQKDKPTNVLSFPGS-DPDDERYGPLLGDIVVALETVTREADEMGIEFPAHLTHLF 123

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHL  YDH D ++A VME  ER I+  LG  DPYE
Sbjct: 124 VHGLLHLFDYDHQDLEEAEVMERKERQIMRCLGYEDPYE 162


>gi|316931569|ref|YP_004106551.1| hypothetical protein Rpdx1_0174 [Rhodopseudomonas palustris DX-1]
 gi|315599283|gb|ADU41818.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           DX-1]
          Length = 167

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 66/157 (42%), Positives = 87/157 (55%), Gaps = 6/157 (3%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ +E   W  E       E V  +A+    ++         EL+++ TD   I  LN  
Sbjct: 10  EVVIEADCWQAESS----AEAVVLRAIETA-AEAIDAGTGGAELAVMLTDDEHIRALNAS 64

Query: 74  YRGIDKPTNVLSFPTAFAS-SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +RG DKPTNVLSFP A        +  MLGDI +AY+ +  EA+  GK F +HL HL +H
Sbjct: 65  FRGKDKPTNVLSFPAAQPEVQPDGAPRMLGDIAIAYQTVRREADDEGKPFGHHLSHLAVH 124

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           GFLHL+GYDH  D+ A  ME  ER+IL  LGI DPY 
Sbjct: 125 GFLHLVGYDHETDQQADEMEDAERTILARLGIPDPYA 161


>gi|121997682|ref|YP_001002469.1| hypothetical protein Hhal_0891 [Halorhodospira halophila SL1]
 gi|145558843|sp|A1WVF5|RRMF_HALHL RecName: Full=Probable rRNA maturation factor
 gi|121589087|gb|ABM61667.1| protein of unknown function UPF0054 [Halorhodospira halophila SL1]
          Length = 154

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 1/134 (0%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-DG 95
           A+ V   +   +       EL++   D      LN +YRG DKPTNVLSFP         
Sbjct: 19  AERVQAWLEPVFEAHGRGGELTVRIVDEDESRALNRDYRGRDKPTNVLSFPCELPPGLPA 78

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            ++ +LGD+V+   ++  EA   GK   +H  H+++HG LHLLGYDH D   A  ME  E
Sbjct: 79  EAAQILGDLVVCAPVVAREAAEQGKPEADHWAHMLVHGALHLLGYDHEDPAQAERMEAEE 138

Query: 156 RSILEDLGINDPYE 169
           R IL  LG+ DPY+
Sbjct: 139 RRILAALGVPDPYQ 152


>gi|254490268|ref|ZP_05103457.1| conserved hypothetical protein TIGR00043, putative [Methylophaga
           thiooxidans DMS010]
 gi|224464401|gb|EEF80661.1| conserved hypothetical protein TIGR00043, putative [Methylophaga
           thiooxydans DMS010]
          Length = 155

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 80/160 (50%), Gaps = 15/160 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D Q A  +    DE   +   E   A              E   ELS+   D      L
Sbjct: 5   VDFQPAF-DGDTPDEAAFQRWAEAALATV------------EEDCELSIRLVDEDESAEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG   PTNVLSFP  F S       +LGD+V+   I+E EA    K  E+H  H++
Sbjct: 52  NSQYRGKTGPTNVLSFP--FDSDIALEPTLLGDLVICVPIVEKEAQQQDKIAEHHWAHMV 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           IHG LHLLGYDH++D +A  ME LE  IL  + I +PYE+
Sbjct: 110 IHGCLHLLGYDHIEDDEAEEMETLEIQILHKMNITNPYEL 149


>gi|332532465|ref|ZP_08408343.1| A heat shock protein involved in translation, predicted protease
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038108|gb|EGI74555.1| A heat shock protein involved in translation, predicted protease
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 152

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E      E       +   ++              +  ELS+V +D  + + 
Sbjct: 4   ELDLQIACEFDNLPSEEQFALWADKALSQ------------YRDESELSIVISDEAQSQQ 51

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG +KPTNVLSF   F +  G    ++GD+++   I+  EA    K F +H  H+
Sbjct: 52  LNNDYRGKNKPTNVLSF--EFEAPPGIDIPLVGDLIICPAIVLAEAIEQEKSFHDHFAHM 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLG+DH+   DA  ME +E+ +L +L I DPY  D
Sbjct: 110 VIHGCLHLLGFDHIKSDDALEMESIEKQLLAELNIADPYRDD 151


>gi|319408020|emb|CBI81674.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 158

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 5/159 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + I +E++ W +E  L  +        + +L      + +   ELSL+FT+   I  
Sbjct: 1   MITIDITIEDSEWDNEDVLYDITTKALTTTMHHLS-----LNQVTSELSLLFTNDDHIAQ 55

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N ++R  +KPTNVLSFP            MLGDI++A E I  EA   GK F++HL H+
Sbjct: 56  INAQWRSQNKPTNVLSFPAFPLKVGQNPKPMLGDIIIARETIMREAKEEGKSFQDHLTHM 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I+HG LHLLGY+H  + +A  ME LER IL  L I +PY
Sbjct: 116 IVHGLLHLLGYNHETNDEANQMEMLEREILSKLSIKNPY 154


>gi|240139954|ref|YP_002964431.1| putative metalloprotease [Methylobacterium extorquens AM1]
 gi|240009928|gb|ACS41154.1| putative metalloprotease [Methylobacterium extorquens AM1]
          Length = 161

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   I      E    +AV   ++         VE+S++  D   ++ LN
Sbjct: 5   EIDIAVEDARWEQAIP---ELEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQALN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A   S    +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAAEQPSQPGLARPLGDVVLAYDTLVRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYEV 170
           HG LHLLG DH   + +A  ME LE + L  LG+ +PY+ 
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRALGVPNPYDD 161


>gi|304393796|ref|ZP_07375721.1| putative metalloprotease [Ahrensia sp. R2A130]
 gi|303293995|gb|EFL88370.1| putative metalloprotease [Ahrensia sp. R2A130]
          Length = 172

 Score =  176 bits (447), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 66/161 (40%), Positives = 89/161 (55%), Gaps = 6/161 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +   + +E   WGDE  L TL E   A A  +++           E S +FT+   +  
Sbjct: 1   MIAFDLTIEGGEWGDEAALATLIERTLATAAPHIVD----GLPEDAETSFLFTNDEAVRV 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN ++RG DKPTNVLSF        G  + +LGDI +A E +  EA    K F+NHL H+
Sbjct: 57  LNRDWRGQDKPTNVLSFAAN--EGGGPVTPLLGDIAIAQETVAREAEEQAKSFDNHLTHM 114

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           I+HG LHL+G+DH +D +A  ME LER IL DL + DPY  
Sbjct: 115 IVHGLLHLIGHDHENDTEADEMEALERRILADLSMADPYAD 155


>gi|218531462|ref|YP_002422278.1| hypothetical protein Mchl_3530 [Methylobacterium chloromethanicum
           CM4]
 gi|218523765|gb|ACK84350.1| protein of unknown function UPF0054 [Methylobacterium
           chloromethanicum CM4]
          Length = 161

 Score =  176 bits (447), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 4/160 (2%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ IAVE+A W   I      E    +AV   ++         VE+S++  D   ++ LN
Sbjct: 5   EIDIAVEDARWEQAIP---ELEAFTLRAVEAGLAILPDSAAGPVEVSVLLADDATVQALN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  DKPTNVLSFP A        +  LGD+VLAY+ +  E+    K FE+H  HL++
Sbjct: 62  RTWRNKDKPTNVLSFPAAEQPFQPGVARPLGDVVLAYDTLVRESAEQSKPFEHHFAHLLV 121

Query: 132 HGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYEV 170
           HG LHLLG DH   + +A  ME LE + L  LG+ +PY+ 
Sbjct: 122 HGTLHLLGQDHETGEAEADAMEALEVAALRALGVPNPYDD 161


>gi|91974722|ref|YP_567381.1| hypothetical protein RPD_0240 [Rhodopseudomonas palustris BisB5]
 gi|123735849|sp|Q13EK9|RRMF_RHOPS RecName: Full=Probable rRNA maturation factor
 gi|91681178|gb|ABE37480.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           BisB5]
          Length = 195

 Score =  176 bits (447), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 11/163 (6%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ +    W  E    ++       A + + +          EL+++ TD   +  LN  
Sbjct: 33  EVVIAADCWQAEASAESVVLRAIEAAATMIDA-----DTGDAELAVMLTDDDGVRALNAS 87

Query: 74  YRGIDKPTNVLSFPTAFAS------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           YRGIDKPTNVLSFP             G +  MLGDI +AY+ +  EA+  GK F +HL 
Sbjct: 88  YRGIDKPTNVLSFPAPQPDYQDACQDSGGAPQMLGDIAIAYQTVRREADDEGKPFAHHLS 147

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           HL +HGFLHL+GYDH  D +A  ME  ERSIL  LGI DPY  
Sbjct: 148 HLAVHGFLHLVGYDHETDAEAETMESTERSILAGLGIPDPYAD 190


>gi|23015403|ref|ZP_00055180.1| COG0319: Predicted metal-dependent hydrolase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 164

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 9/162 (5%)

Query: 11  LDLQIAVENALWGDEI-HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +D+ + ++   W D +      C  + A A+         + E +VELS+V  D   ++ 
Sbjct: 5   IDIAVDIQYPAWTDVLPDAEARCGRLAATAL-----GAVDLPEGVVELSIVLADDATVQG 59

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGC---SSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN ++RG D+PTNVLSF +           + L+LGD++LAYE    EA   GK   +H 
Sbjct: 60  LNRDWRGKDQPTNVLSFASLDDEDAPLVPGAPLLLGDVILAYETCAAEAKDQGKTLADHF 119

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            HL++HG LHLLGYDH+DD++A  ME LE ++L  LGI DPY
Sbjct: 120 GHLVVHGVLHLLGYDHMDDEEAAEMESLETTLLAALGIADPY 161


>gi|90407493|ref|ZP_01215676.1| hypothetical protein PCNPT3_11282 [Psychromonas sp. CNPT3]
 gi|90311414|gb|EAS39516.1| hypothetical protein PCNPT3_11282 [Psychromonas sp. CNPT3]
          Length = 157

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 9/158 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA       DE  L +L   +    +   I KG  +     EL++   DS   + L
Sbjct: 5   IDLQIAT-----MDEKALPSLA--LIETWIKEAIIKGSSITREEAELTVRIVDSVESQQL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YR  DKPTNVLSFP  F +  G    +LGD+V+  +I+E EA    K+   H  H++
Sbjct: 58  NGQYRHKDKPTNVLSFP--FQAPMGIQLPLLGDLVICKQIVEQEALEQNKDLNAHWAHML 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLG+DH+ ++ A  ME LE  IL  LG   PY
Sbjct: 116 IHGSLHLLGFDHIIEQQALEMESLETKILVTLGFPPPY 153


>gi|146337217|ref|YP_001202265.1| putative metal-dependent hydrolase [Bradyrhizobium sp. ORS278]
 gi|146190023|emb|CAL74015.1| conserved hypothetical protein; putative metal-dependent hydrolase
           [Bradyrhizobium sp. ORS278]
          Length = 180

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/160 (40%), Positives = 85/160 (53%), Gaps = 8/160 (5%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ V    W D+     + +     A   + +          E++++ TD   I TLN  
Sbjct: 21  EVIVAADCWQDQPDAEDVIQRAIIAAAEMVDA-----DVGDAEIAVMLTDDGGIRTLNSN 75

Query: 74  YRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           +RGIDKPTNVLSFP         D  +  MLGDI +AYE +  EA+   K F +HL HL 
Sbjct: 76  WRGIDKPTNVLSFPALQPTGPRGDEDAPRMLGDIAIAYETMRREADEEQKPFAHHLSHLT 135

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHL+GYDH  D +A  ME LE  IL  LGI DPY  
Sbjct: 136 VHGFLHLIGYDHETDDEAEEMEALETEILAHLGIPDPYAD 175


>gi|154245756|ref|YP_001416714.1| hypothetical protein Xaut_1812 [Xanthobacter autotrophicus Py2]
 gi|154159841|gb|ABS67057.1| protein of unknown function UPF0054 [Xanthobacter autotrophicus
           Py2]
          Length = 176

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/158 (41%), Positives = 86/158 (54%), Gaps = 4/158 (2%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + + VE   W          EV+  +A    ++          E+++  TD  RI  LN 
Sbjct: 20  IDVLVEADGWSALPD----AEVICVRAAQAALAACGDEVPEPCEVAITLTDDARIRVLNR 75

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+RG DK TNVLSFP      D  +   LGDI++A E +  EA    K   +HL HL++H
Sbjct: 76  EWRGKDKATNVLSFPQPDLPDDVDAPQPLGDIIVALETLTGEARAEDKTAGHHLAHLVVH 135

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           G LHLLGYDH+DD +A  ME LER IL  LGI+DPY +
Sbjct: 136 GTLHLLGYDHIDDTEAEEMEALERRILAGLGIDDPYAL 173


>gi|71909141|ref|YP_286728.1| hypothetical protein Daro_3529 [Dechloromonas aromatica RCB]
 gi|123626555|sp|Q47A73|RRMF_DECAR RecName: Full=Probable rRNA maturation factor
 gi|71848762|gb|AAZ48258.1| Protein of unknown function UPF0054 [Dechloromonas aromatica RCB]
          Length = 149

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 81/164 (49%), Gaps = 17/164 (10%)

Query: 7   NLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           N P   L ++V+ A   + + LR      F +     +  G        E+++   D+  
Sbjct: 3   NAPSNRLNLSVQYACNREGLPLR----ADFVRWARAALVGGG-------EVTIRLVDADE 51

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            ++LN EYRG D  TNVLSFP           +++GD+V+   ++  EA    K  E H 
Sbjct: 52  GQSLNKEYRGKDYATNVLSFPY------DTEPVVMGDLVVCPSVVSKEAAEQNKPLEAHY 105

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            HL +HG LHL G+DH +D DA  ME  ER IL  +G  DPY V
Sbjct: 106 AHLTVHGMLHLQGWDHDNDDDAQAMEDEEREILAAMGYPDPYAV 149


>gi|315127053|ref|YP_004069056.1| hypothetical protein PSM_A1982 [Pseudoalteromonas sp. SM9913]
 gi|315015567|gb|ADT68905.1| hypothetical protein PSM_A1982 [Pseudoalteromonas sp. SM9913]
          Length = 152

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E              + V ++              +  EL++V +D  + + 
Sbjct: 4   ELDLQIACEFDNLPSLEQFAMWADKVLSQ------------YRDESELTIVISDEAQSQQ 51

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG +KPTNVLSF   F +  G    ++GD+++   I+  EA    K F +H  H+
Sbjct: 52  LNNDYRGKNKPTNVLSF--EFEAPPGIDIPLVGDLIICPAIVLAEAQEQEKSFHDHFAHM 109

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLG+DH+  +DA  ME +E+ +L +L I DPY  D
Sbjct: 110 VIHGCLHLLGFDHIKSEDALEMESIEKQLLAELNIADPYRDD 151


>gi|87119368|ref|ZP_01075266.1| hypothetical protein MED121_13900 [Marinomonas sp. MED121]
 gi|86165759|gb|EAQ67026.1| hypothetical protein MED121_13900 [Marinomonas sp. MED121]
          Length = 154

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 15/160 (9%)

Query: 10  RLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQ+A ++      E       +    +             +   EL++   D    +
Sbjct: 5   DLDLQLASQDTKGLPSEADFMQWIQPALPQ------------NDTCFELTVRIVDEEESQ 52

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN +YRG DK TNVLSFP  F   DG    +LGD+V+  +++E EA    K+  +H  H
Sbjct: 53  NLNHQYRGKDKSTNVLSFP--FEVPDGIELPLLGDLVICRQVVEKEAVEQNKKLFHHWAH 110

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++IHG LHL G+DH+ + DA  ME LE SIL  L I +PY
Sbjct: 111 MVIHGTLHLRGFDHIKEDDAQEMESLEISILGQLDIPNPY 150


>gi|78048198|ref|YP_364373.1| putative metalloprotease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325925033|ref|ZP_08186455.1| hypothetical protein TIGR00043 [Xanthomonas perforans 91-118]
 gi|123730288|sp|Q3BS90|RRMF_XANC5 RecName: Full=Probable rRNA maturation factor
 gi|78036628|emb|CAJ24319.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325544545|gb|EGD15906.1| hypothetical protein TIGR00043 [Xanthomonas perforans 91-118]
          Length = 161

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/138 (41%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--S 93
           F K V+  +      +    +L++   D     +LN  YRG D  TNVLSFP        
Sbjct: 27  FRKWVAAALK----GRIREADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLP 82

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
            G    +LGD+V+   ++  EA   GK    H  HL +HG LHLLG+DH DDK+A  ME 
Sbjct: 83  KGIKMPLLGDLVICAPVVAREAAEQGKLLAAHYAHLTVHGTLHLLGWDHEDDKEAEAMEQ 142

Query: 154 LERSILEDLGINDPYEVD 171
           LER IL DLGI+DPY  +
Sbjct: 143 LEREILADLGIDDPYAGE 160


>gi|260431175|ref|ZP_05785146.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415003|gb|EEX08262.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 164

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 20/172 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L+I+VE++ W          E +  +AVS  ++    +  ++ E+S++  D  RI  L
Sbjct: 1   MNLEISVEDSRW-------QRLEELSRRAVSATLAYLR-MNPDLCEVSILGCDDSRIAEL 52

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+RG   PTNVLS+P                  D    ++LGDI ++Y+    EAN  
Sbjct: 53  NNEFRGKPAPTNVLSWPAEDLAPEEPGATPPLPEPDFTGEIVLGDIAISYDTCLREANEA 112

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GK  ++H+VHLI+HG LHLLGYDHV D DA +MEG E  IL  LGI++PY V
Sbjct: 113 GKSMDDHVVHLIVHGVLHLLGYDHVRDPDATLMEGCEIEILGKLGIDNPYNV 164


>gi|317047310|ref|YP_004114958.1| hypothetical protein Pat9b_1080 [Pantoea sp. At-9b]
 gi|316948927|gb|ADU68402.1| protein of unknown function UPF0054 [Pantoea sp. At-9b]
          Length = 157

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A  E+    +E   +   E                  +   E+++   D 
Sbjct: 1   MSAVILDLQLACAESQGLPEEAAFQRWLEAAVT------------PFQPESEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E 
Sbjct: 49  AESHELNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAVEQGKSLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 107 HWAHMVVHGTLHLLGYDHIEDDEAEEMEALETEIMLALGYPDPY 150


>gi|92114457|ref|YP_574385.1| hypothetical protein Csal_2336 [Chromohalobacter salexigens DSM
           3043]
 gi|122419590|sp|Q1QV22|RRMF_CHRSD RecName: Full=Probable rRNA maturation factor
 gi|91797547|gb|ABE59686.1| protein of unknown function UPF0054 [Chromohalobacter salexigens
           DSM 3043]
          Length = 154

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/164 (39%), Positives = 88/164 (53%), Gaps = 14/164 (8%)

Query: 8   LPRLDLQIAVENA--LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
            P +D Q+A+E A  L   +  L      V A+              +  ELS+ F  + 
Sbjct: 2   TPDIDRQVALETATELLPTQADLEAWVGAVLAR----------HPDTDRHELSVRFVTAD 51

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
             + LN +YRG DKPTNVLSFP  F +  G    +LGD+ + + ++  EA   GK   +H
Sbjct: 52  ESQALNRDYRGKDKPTNVLSFP--FEAPPGLPLALLGDLAICHAVVVDEAAEQGKPLAHH 109

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             H++IHG LHLLGYDH+DD++A  ME LER +L    I DPY 
Sbjct: 110 YAHMVIHGTLHLLGYDHIDDREAEEMEALERELLAHFAIGDPYA 153


>gi|134296888|ref|YP_001120623.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           vietnamiensis G4]
 gi|134140045|gb|ABO55788.1| protein of unknown function UPF0054 [Burkholderia vietnamiensis G4]
          Length = 258

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L+ +++V+   +GDEI       +   K ++  I    F      +L++ F       T
Sbjct: 108 ELEFELSVQ---YGDEITAELRKTLPKRKLIAEWIEPALFA---SAQLTVRFVGEEEGRT 161

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D PTNVL+F             ++GD+VL   ++E EA    K    H  HL
Sbjct: 162 LNAGYRHKDYPTNVLTFAY----DPAPDGTVIGDLVLCCPVVEKEAREQNKPLAAHYAHL 217

Query: 130 IIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   D DA  ME LE  IL  LG  +PY+
Sbjct: 218 LVHGALHAQGYDHETSDADAAEMEALEIDILAKLGFPNPYQ 258


>gi|85714183|ref|ZP_01045172.1| hypothetical protein NB311A_08503 [Nitrobacter sp. Nb-311A]
 gi|85699309|gb|EAQ37177.1| hypothetical protein NB311A_08503 [Nitrobacter sp. Nb-311A]
          Length = 190

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 71/158 (44%), Positives = 83/158 (52%), Gaps = 8/158 (5%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +I V    W  E     +       A     +          EL+++ TD   I TLN  
Sbjct: 31  EILVVADCWRAEADAEAIIHHAIETA-----AGMVDEDTGDAELAIMLTDDAGIHTLNAN 85

Query: 74  YRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           +RGIDKPTNVLSFP       S  G    MLGDI +AYE +  EA+   K F +HL HL 
Sbjct: 86  WRGIDKPTNVLSFPALQPTGPSLPGDPPRMLGDIAIAYETLRREADNEHKPFSHHLSHLA 145

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHGFLHL+GYDH  D DA  ME LER IL  LGI DPY
Sbjct: 146 IHGFLHLIGYDHETDADAVEMENLERKILAQLGIPDPY 183


>gi|283784429|ref|YP_003364294.1| hypothetical protein ROD_06711 [Citrobacter rodentium ICC168]
 gi|282947883|emb|CBG87445.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 155

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN A   +E   +T       +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACENNAGLPEEARFQTWLNAAIPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAREQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|254787741|ref|YP_003075170.1| hypothetical protein TERTU_3876 [Teredinibacter turnerae T7901]
 gi|237685656|gb|ACR12920.1| conserved hypothetical protein TIGR00043 [Teredinibacter turnerae
           T7901]
          Length = 155

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 80/162 (49%), Gaps = 13/162 (8%)

Query: 10  RLDLQIA--VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +LD Q A  VE +   DE  L +    VFA           F + N   + +   D    
Sbjct: 4   QLDFQNASTVETSAMPDERDLLSWLNAVFA------SQPATFTEPN---ICVRIVDEGES 54

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           E LN  YRG   PTNVLSFP       G    +LGD+V+  +++  EA    K    H  
Sbjct: 55  EELNSTYRGKHSPTNVLSFPADLPP--GVDIELLGDLVICAQVVAREAEEQAKAPAAHWA 112

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           H+++HG LHLLGYDH++D +A  ME LE  IL+ L    PYE
Sbjct: 113 HMVVHGCLHLLGYDHIEDDEADAMEALETKILQALDFPPPYE 154


>gi|78067492|ref|YP_370261.1| putative metalloprotease [Burkholderia sp. 383]
 gi|77968237|gb|ABB09617.1| protein of unknown function UPF0054 [Burkholderia sp. 383]
          Length = 258

 Score =  174 bits (441), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 5   KVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
            +  P LDL +      +GDEI       +   K ++  I    F      +L++ F   
Sbjct: 105 ALREPELDLSV-----QYGDEITSDVRKTLPKRKLIAEWIEPALFA---SAQLTVRFVGE 156

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA+  GK    
Sbjct: 157 EEGRTLNAGYRHKDYPTNVLTFAYDAAP----DGTVIGDLVLCCPVVEKEAHEQGKPLTA 212

Query: 125 HLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           H  HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 213 HYAHLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 258


>gi|325524865|gb|EGD02813.1| putative metalloprotease fusion protein [Burkholderia sp. TJI49]
          Length = 258

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 58/161 (36%), Positives = 79/161 (49%), Gaps = 11/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L+L ++V+   +GDEI       +   K ++  I    F      +L++ F       T
Sbjct: 108 ELELDLSVQ---YGDEITSEVRKTLPKRKLIAEWIEPALFA---SAQLTVRFVGEEEGRT 161

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D PTNVL+F    A        ++GD+VL   ++E EA   GK    H  HL
Sbjct: 162 LNAGYRHKDYPTNVLTFAYDAAP----DGTVIGDLVLCCPVVEKEAREQGKPLAAHYAHL 217

Query: 130 IIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY 
Sbjct: 218 LVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYR 258


>gi|312797210|ref|YP_004030132.1| hypothetical protein [Burkholderia rhizoxinica HKI 454]
 gi|312168985|emb|CBW75988.1| Hypothetical metal-binding protein [Burkholderia rhizoxinica HKI
           454]
          Length = 157

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 7/133 (5%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
              ++  +    F      EL++ F D      LN  YRG D PTNVL+F    + ++  
Sbjct: 29  RARIAGWVRAALFAP---AELTIRFVDEQEGRALNRSYRGKDYPTNVLTFAYGESDNEPV 85

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           S    GD+VL   ++E EA    K  + H  HLI+HG LH  GYDH DD+ A  ME +E 
Sbjct: 86  S----GDLVLCCPVVESEAREQHKPLDAHYAHLIVHGVLHAQGYDHEDDEQAREMESIET 141

Query: 157 SILEDLGINDPYE 169
            IL  LG  DPY 
Sbjct: 142 DILARLGYPDPYA 154


>gi|331005427|ref|ZP_08328807.1| A heat shock protein involved in translation [gamma proteobacterium
           IMCC1989]
 gi|330420760|gb|EGG95046.1| A heat shock protein involved in translation [gamma proteobacterium
           IMCC1989]
          Length = 177

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 3/161 (1%)

Query: 11  LDLQIAVENALW-GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +D Q A  +A +  +E  L                           EL++   D    + 
Sbjct: 14  IDRQNASSSADYLPNEDDLVRWVNTALTHPQVFGGVLLNKPSLVQAELTIRLVDEPESQQ 73

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YR  DKPTNVLSFP      D     +LGD+++   ++  EA    K  ++H  H+
Sbjct: 74  LNNDYRQKDKPTNVLSFPADL--PDIVDLPLLGDLIICAPVVIKEAEEQQKPLQSHWAHM 131

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           ++HG LHLLGYDH+D+ DA +ME +E  +L  +GI  PY V
Sbjct: 132 VVHGTLHLLGYDHIDENDANIMEAIETDVLAAMGIACPYTV 172


>gi|163797132|ref|ZP_02191087.1| hypothetical protein BAL199_11501 [alpha proteobacterium BAL199]
 gi|159177648|gb|EDP62201.1| hypothetical protein BAL199_11501 [alpha proteobacterium BAL199]
          Length = 182

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 70/168 (41%), Positives = 91/168 (54%), Gaps = 8/168 (4%)

Query: 2   SVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVF 61
           S        +DL + V++  W     L    E V  KAV   +     ++   VELS+V 
Sbjct: 12  SRSSATAATVDLMVRVDHTDWR---ALLDDPETVVEKAVLAALDA---LEPEAVELSVVL 65

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
            D   +  LN ++RG D PTNVLSFP AF    G     LGD++LA E ++ EA   GK 
Sbjct: 66  ADDAAVRALNRDHRGKDAPTNVLSFPPAFVPPAG--PRPLGDVILALETVQREAVEQGKA 123

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             +HL HL++HG LHL GYDH  + DA  ME LER+IL  LG+ DPY 
Sbjct: 124 TVDHLRHLVVHGVLHLSGYDHETESDAEEMEDLERTILAGLGVADPYA 171


>gi|332306416|ref|YP_004434267.1| hypothetical protein Glaag_2054 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173745|gb|AEE22999.1| protein of unknown function UPF0054 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 152

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 13/160 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA       D ++L    +  F + +  +++      +   E+++   D    + L
Sbjct: 5   VDLQIA------SDALNLPKTDD--FQRWLDAVLANQQLSNQ---EITVRIVDKEESQDL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G S  +LGD+V+   ++  EA    K   +H  H+I
Sbjct: 54  NHTYRGKDKPTNVLSFP--FEAPPGLSLNLLGDLVVCASVVADEAKEQHKALAHHWAHMI 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HG LHLLG+DH+ D +A  ME +E  IL+   I+DPY+ 
Sbjct: 112 VHGALHLLGFDHITDDEAQQMEAVEVIILKQFSIDDPYQD 151


>gi|71276466|ref|ZP_00652742.1| Protein of unknown function UPF0054 [Xylella fastidiosa Dixon]
 gi|71898875|ref|ZP_00681042.1| Protein of unknown function UPF0054 [Xylella fastidiosa Ann-1]
 gi|71162782|gb|EAO12508.1| Protein of unknown function UPF0054 [Xylella fastidiosa Dixon]
 gi|71731287|gb|EAO33351.1| Protein of unknown function UPF0054 [Xylella fastidiosa Ann-1]
          Length = 213

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K V+  +      +    +L++   D      LN+ YR  D  TNVLSFP        
Sbjct: 79  FRKWVAATLQ----GRIRKADLAIRIVDEKEGRALNYHYRNKDYATNVLSFPAQLPEPFP 134

Query: 96  --CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                 +LGDIV+   +I  EA   GK    H  HL +HG LHLLG++H D ++A  ME 
Sbjct: 135 KALKIPLLGDIVMCAPVIAREATEQGKSLSAHYAHLTVHGTLHLLGWNHEDHQEADAMEQ 194

Query: 154 LERSILEDLGINDPY 168
           LER IL +LGI+DPY
Sbjct: 195 LEREILANLGISDPY 209


>gi|167585514|ref|ZP_02377902.1| hypothetical protein BuboB_09264 [Burkholderia ubonensis Bu]
          Length = 259

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 57/162 (35%), Positives = 78/162 (48%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI           K ++  I+   F      +L++ F       
Sbjct: 110 PELDLAV-----QYGDEITGDVRKACPKRKLIAEWIAPALFAD---AQLTVRFVGEEEGR 161

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +LN  YR  D PTNVL+F       +     ++GD+VL   ++E EA   GK  + H  H
Sbjct: 162 SLNDSYRHKDYPTNVLTFAY----DEAPDGTVIGDLVLCCPVVEKEAREQGKPLDAHYAH 217

Query: 129 LIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY 
Sbjct: 218 LLVHGVLHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYR 259


>gi|269139974|ref|YP_003296675.1| hypothetical protein ETAE_2629 [Edwardsiella tarda EIB202]
 gi|267985635|gb|ACY85464.1| hypothetical protein ETAE_2629 [Edwardsiella tarda EIB202]
 gi|304559807|gb|ADM42471.1| heat shock protein [Edwardsiella tarda FL6-60]
          Length = 157

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 15/162 (9%)

Query: 11  LDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA  E      E       E V  +              +  E+++   D      
Sbjct: 6   LDLQIACVETPGLPAEGDFLRWLEAVLPR------------FRDEAEVTIRLVDEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D+PTNVLSFP  F +  G    +LGD+V+  +++E EA        +H  H+
Sbjct: 54  LNLTYRGKDRPTNVLSFP--FEAPPGIELPLLGDMVICRQVVEREAQEQNIAPLSHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH+ D++A  ME LE  I++ LG  DPY  +
Sbjct: 112 VVHGSLHLLGYDHISDEEAEEMESLEADIMQALGYPDPYAAE 153


>gi|262274720|ref|ZP_06052531.1| predicted metal-dependent hydrolase [Grimontia hollisae CIP 101886]
 gi|262221283|gb|EEY72597.1| predicted metal-dependent hydrolase [Grimontia hollisae CIP 101886]
          Length = 154

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA +N    D +   T  +  F +AV +             E+++   D    ++L
Sbjct: 5   VDLQIATQNT---DNLPTDTQFQQWFEQAVQSF--------REQAEVTIRLVDEEESQSL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA    K+   H  H++
Sbjct: 54  NRDYRGKDKPTNVLSFP--FDAPPGIELDLLGDLVICRQVVEKEAEEQNKDLFAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHLLGYDH++D++A  ME LE SI+  LG ++PY  D
Sbjct: 112 VHGSLHLLGYDHINDEEAEEMESLEISIMNALGFDNPYAAD 152


>gi|192359229|ref|YP_001982117.1| hypothetical protein CJA_1637 [Cellvibrio japonicus Ueda107]
 gi|254800588|sp|B3PER3|RRMF_CELJU RecName: Full=Probable rRNA maturation factor
 gi|190685394|gb|ACE83072.1| hypothetical protein CJA_1637 [Cellvibrio japonicus Ueda107]
          Length = 177

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 13/164 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++  ++D++I   +     E H+R                     + +  E+S+   D+ 
Sbjct: 1   MSKYQIDIEINSASQQLPSEEHIRQWISTALDS-----------QQLDEAEVSVYIVDTD 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN EYR  D  TNVLSFP            +LGD+V+   ++E EA+   K  + H
Sbjct: 50  EGRDLNREYRERDYATNVLSFPADIPPE--VEIPLLGDLVVCAPVVEHEADEQHKPLDAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             H++IHG LHLLGYDH+D+ +A  ME LE  +L  LG  DPY+
Sbjct: 108 WAHMLIHGSLHLLGYDHIDNDEAETMEALETQLLARLGYADPYD 151


>gi|188576119|ref|YP_001913048.1| putative metalloprotease [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520571|gb|ACD58516.1| conserved hypothetical protein, putative [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 137

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/138 (41%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--S 93
           F K V+  +      +    +L++   D     +LN  YRG D  TNVLSFP        
Sbjct: 3   FRKWVAAALK----GRIREADLAVRVVDEKEGCSLNHHYRGKDYATNVLSFPAELPEGLP 58

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
            G    +LGD+V+   ++  EA   GK    H  HL +HG LHLLG+DH DDK+A  ME 
Sbjct: 59  KGIKMPLLGDLVICAPVVAREAAEQGKSLAAHYAHLTVHGTLHLLGWDHDDDKEADAMEQ 118

Query: 154 LERSILEDLGINDPYEVD 171
           LER IL DLGI+DPY  +
Sbjct: 119 LEREILADLGIDDPYAGE 136


>gi|71902417|ref|ZP_00684373.1| Protein of unknown function UPF0054 [Xylella fastidiosa Ann-1]
 gi|71727855|gb|EAO30096.1| Protein of unknown function UPF0054 [Xylella fastidiosa Ann-1]
          Length = 213

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K V+  +      +    +L++   D      LN+ YR  D  TNVLSFP        
Sbjct: 79  FRKWVAATLQ----GRIRKADLAIRIVDEKEGRALNYHYRNKDYATNVLSFPAQLPEPFP 134

Query: 96  --CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                 +LGDIV+   +I  EA   GK    H  HL +HG LHLLG++H D ++A  ME 
Sbjct: 135 KALKIPLLGDIVMCAPVIAREATEQGKSLSAHYAHLTVHGTLHLLGWNHEDHQEADAMEQ 194

Query: 154 LERSILEDLGINDPY 168
           LER IL +LGI+DPY
Sbjct: 195 LEREILANLGISDPY 209


>gi|89092051|ref|ZP_01165006.1| hypothetical protein MED92_07786 [Oceanospirillum sp. MED92]
 gi|89083786|gb|EAR63003.1| hypothetical protein MED92_07786 [Oceanospirillum sp. MED92]
          Length = 151

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/160 (33%), Positives = 79/160 (49%), Gaps = 15/160 (9%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           D+Q  VE      E   +   E   ++              +  E+ +        + LN
Sbjct: 6   DIQFEVE-GNLPSESDFQRWVEAALSE------------FRDEGEICIRVVSPEESQELN 52

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             YR  DKPTNVLSFP  F   +G    +LGD+++  E++  EA+   K   +H  H+++
Sbjct: 53  HTYRDKDKPTNVLSFP--FDIPEGIPIQLLGDLIICAEVVVTEASEQNKALFDHWAHMVV 110

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           HG LHL+G+DH+ D +A  ME LER IL  L I DPY  +
Sbjct: 111 HGCLHLIGFDHIKDDEAEEMENLERQILASLDIADPYRDE 150


>gi|114706888|ref|ZP_01439788.1| hypothetical protein FP2506_18769 [Fulvimarina pelagi HTCC2506]
 gi|114537836|gb|EAU40960.1| hypothetical protein FP2506_18769 [Fulvimarina pelagi HTCC2506]
          Length = 188

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/168 (38%), Positives = 89/168 (52%), Gaps = 3/168 (1%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           V +     + L ++VE+  W   +      E      +  +  +  F K    ELS+  +
Sbjct: 11  VPETGASWVSLALSVEDDRWEAALGNP---EAFVTATLDAVARRFEFSKPFASELSVTLS 67

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D   +  +N ++R  DKPTNVLSFP            +LGD++LAYE    EA    K F
Sbjct: 68  DDETVREINGQWREKDKPTNVLSFPMVDLEPGERPGPLLGDLILAYETCAREAAGEAKPF 127

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            NH  HL++HGFLH LGYDH++D +A  ME LE SIL  LGI DPY+V
Sbjct: 128 VNHARHLLVHGFLHCLGYDHIEDDEAEEMEALETSILAGLGIPDPYDV 175


>gi|99080031|ref|YP_612185.1| hypothetical protein TM1040_0190 [Ruegeria sp. TM1040]
 gi|99036311|gb|ABF62923.1| protein of unknown function UPF0054 [Ruegeria sp. TM1040]
          Length = 194

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 18/174 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           R+ L + +E+A W D   L    +   +  ++ L      +++   E++++  D  RI  
Sbjct: 24  RMILDVVIEDARW-DAAALEKQAQEAVSATLAYL-----ELEDEDWEVTVLGCDDARIAD 77

Query: 70  LNFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANV 117
           LN E+R   KPTNVLS+P                  D      LGDI ++Y+    EAN+
Sbjct: 78  LNAEFREKPKPTNVLSWPAQELAAAQDGGQPTPPEVDFMGDAALGDIAISYDTCVKEANL 137

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             K  E+H+ HL++HG LHLLGYDH+ D DA +ME LE  IL  LGI DPY ++
Sbjct: 138 AHKSREDHVRHLLVHGTLHLLGYDHIRDGDATIMETLEVGILGKLGIPDPYIIE 191


>gi|317491141|ref|ZP_07949577.1| hypothetical protein HMPREF0864_00340 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920688|gb|EFV42011.1| hypothetical protein HMPREF0864_00340 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 164

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/170 (36%), Positives = 88/170 (51%), Gaps = 15/170 (8%)

Query: 3   VKKVNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVF 61
            + ++   LDLQIA EN      E   R   E V  K             +   E+++  
Sbjct: 5   QQNMSNVILDLQIACENTEGLPAEADFRLWLEAVLPK------------FQEEAEVTIRL 52

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
            D      LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA      
Sbjct: 53  VDEAESHELNMTYRGKDKPTNVLSFP--FEAPPGIELPLLGDMIICRQVVEAEAKEQEIT 110

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             +H  H+++HG LHLLGYDH+ D++A  ME LE  I+++LG  DPY  +
Sbjct: 111 LLSHWAHMVVHGSLHLLGYDHIIDEEAEEMEALEAEIMQELGYPDPYAAE 160


>gi|330811910|ref|YP_004356372.1| hypothetical protein PSEBR_a4946 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380018|gb|AEA71368.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 152

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E+A    E   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVACEHAA-PSEAQFRQWCELALRQRSAD------------SELTIRLVDEPEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA    K  E H  HL
Sbjct: 50  LNHTWRQKDYATNVLSFP-ADVPDELLDIPLLGDLVICVPVVEREAAEQDKTPEAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D +A  ME LER++L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIEDDEAEEMEALERTLLAELGHPDPYAGD 150


>gi|109898525|ref|YP_661780.1| hypothetical protein Patl_2208 [Pseudoalteromonas atlantica T6c]
 gi|123064566|sp|Q15TR2|RRMF_PSEA6 RecName: Full=Probable rRNA maturation factor
 gi|109700806|gb|ABG40726.1| protein of unknown function UPF0054 [Pseudoalteromonas atlantica
           T6c]
          Length = 152

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 13/160 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQ+A + A        +     V A             + +  EL++   ++   + L
Sbjct: 5   VDLQVASDAANLPSADDFQRWLNAVLA-----------HQQLSEHELTVRIVETQESQEL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +  G S  +LGD+V+  +++  EA+   K+  +H  H+I
Sbjct: 54  NLTYRGKDKPTNVLSFP--FEAPPGLSLNLLGDLVVCADVVAHEADEQHKKLHHHWAHMI 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HG LHLLG+DH++D +A  ME LE  IL+   I+DPY+ 
Sbjct: 112 VHGALHLLGFDHINDDEAKEMEALEVDILKQFSIDDPYQD 151


>gi|194439895|ref|ZP_03071958.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|253774357|ref|YP_003037188.1| metalloprotease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160738|ref|YP_003043846.1| putative metalloprotease [Escherichia coli B str. REL606]
 gi|300907838|ref|ZP_07125454.1| hypothetical protein HMPREF9536_05750 [Escherichia coli MS 84-1]
 gi|300931596|ref|ZP_07146908.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           187-1]
 gi|301302142|ref|ZP_07208275.1| hypothetical protein HMPREF9347_00710 [Escherichia coli MS 124-1]
 gi|194421189|gb|EDX37213.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|242376433|emb|CAQ31135.1| conserved protein involved in translation [Escherichia coli
           BL21(DE3)]
 gi|253325401|gb|ACT30003.1| protein of unknown function UPF0054 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972639|gb|ACT38310.1| hypothetical protein ECB_00627 [Escherichia coli B str. REL606]
 gi|253976833|gb|ACT42503.1| hypothetical protein ECD_00627 [Escherichia coli BL21(DE3)]
 gi|300400470|gb|EFJ84008.1| hypothetical protein HMPREF9536_05750 [Escherichia coli MS 84-1]
 gi|300460620|gb|EFK24113.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           187-1]
 gi|300842694|gb|EFK70454.1| hypothetical protein HMPREF9347_00710 [Escherichia coli MS 124-1]
 gi|315255034|gb|EFU35002.1| putative metalloprotease YbeY [Escherichia coli MS 85-1]
 gi|323963227|gb|EGB58795.1| hypothetical protein ERGG_00413 [Escherichia coli H489]
 gi|332342006|gb|AEE55340.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 155

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQKESEVTIRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|221134936|ref|ZP_03561239.1| hypothetical protein GHTCC_08396 [Glaciecola sp. HTCC2999]
          Length = 162

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 98/162 (60%), Gaps = 6/162 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +D+Q A+       E   + L + +  K V+++++      +++ EL++ F DS   ++
Sbjct: 7   DIDIQWAISEPSQLSETQAQ-LSDDIIIKTVTSVLNNHN---DSVGELTIRFVDSVESQS 62

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  DKPTNVLSFP      D   S +LGD+++   +++ EA    K   +H  HL
Sbjct: 63  LNHTYRDKDKPTNVLSFPAEI--PDFIESTLLGDLIICDAVVKTEAKEQQKSLIHHYQHL 120

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           I+HG LHLLG+DH+++ +A VME  E ++L +LGI+DPY+VD
Sbjct: 121 IVHGTLHLLGFDHIENNEAVVMENHEIAVLNELGIDDPYQVD 162


>gi|300113053|ref|YP_003759628.1| hypothetical protein Nwat_0337 [Nitrosococcus watsonii C-113]
 gi|299538990|gb|ADJ27307.1| protein of unknown function UPF0054 [Nitrosococcus watsonii C-113]
          Length = 153

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 70/136 (51%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
                     +      +    E+++  TD +    LN  YR  +  TN+LSFP    S 
Sbjct: 16  APLQADFQRWVEAALLNQSKAGEVTIRVTDENEAAELNRRYRRKEGATNILSFPFEIPSC 75

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                 +LGD+++   ++  EA    K+ ++H  HL++HG LHLLG+DH  + +A  ME 
Sbjct: 76  VPFDIPLLGDLIICAPVVAREALEQAKKEQDHWAHLVVHGVLHLLGFDHQQEVEAQQMEA 135

Query: 154 LERSILEDLGINDPYE 169
           LE +ILE LG +DPYE
Sbjct: 136 LEVTILESLGYSDPYE 151


>gi|253999827|ref|YP_003051890.1| hypothetical protein Msip34_2121 [Methylovorus sp. SIP3-4]
 gi|253986506|gb|ACT51363.1| protein of unknown function UPF0054 [Methylovorus sp. SIP3-4]
          Length = 155

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 76/166 (45%), Gaps = 23/166 (13%)

Query: 8   LPR--LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +PR  +D+Q+A E A    +   R                          EL+L   D  
Sbjct: 1   MPRLAMDVQVASEAANIPADKLFRKWARATLRV---------------DTELALRIVDED 45

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN +YRG D  TNVL+FP            ++GDI+L   ++  EA   GK  E H
Sbjct: 46  EGRALNRDYRGKDYATNVLTFPLTE------EPHLMGDIILCAPVVAREAAEQGKPIEAH 99

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             HL +HG LHL GYDH  +  A +MEGLE  I+  LG +DPY  +
Sbjct: 100 YAHLTVHGVLHLHGYDHETEPQAELMEGLETEIVTKLGYSDPYAAE 145


>gi|332140831|ref|YP_004426569.1| hypothetical protein MADE_1007145 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693281|sp|B4S0S0|RRMF_ALTMD RecName: Full=Probable rRNA maturation factor
 gi|327550853|gb|AEA97571.1| hypothetical protein MADE_1007145 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 158

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 4/157 (2%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I V+ A  G+E+    +      +  +N + K   + +   E+++ FTD    ++LN EY
Sbjct: 5   IDVQQAFEGEEVISIDIPSPAELELWANAVLKYEGLSDQ--EVTIRFTDEAESQSLNSEY 62

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           RG  KPTNVLSFP  F +  G    +LGD+V+   +I  EA    K+  +H  H+ +HG 
Sbjct: 63  RGKHKPTNVLSFP--FEAPPGIEINLLGDLVICAPVISREAEEQDKQVSDHYAHMTVHGL 120

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           LHL+GYDH+DD +A  MEG E  IL  LGI++PY+ D
Sbjct: 121 LHLMGYDHIDDAEAEEMEGKEIDILAQLGIDNPYDAD 157


>gi|292493859|ref|YP_003529298.1| hypothetical protein Nhal_3899 [Nitrosococcus halophilus Nc4]
 gi|291582454|gb|ADE16911.1| protein of unknown function UPF0054 [Nitrosococcus halophilus Nc4]
          Length = 153

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 8/159 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + + V+ A+    I L    +V F + V  ++      +    E+++   D   +  L
Sbjct: 1   MSIAVQVQYAVSRTGIPL----QVDFQRWVEAVL----VNQSKEGEVTIRIADEAEVAEL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N+ YR  +  TNVLSFP   ++       +LGD+V+   ++  EA    KE   H  HL+
Sbjct: 53  NWRYRYKEGATNVLSFPFELSAPLPFQISLLGDLVICAPVVAREALEHAKEERAHWAHLV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLG+DH  + +A  ME +E +IL+ LG  +PYE
Sbjct: 113 VHGVLHLLGFDHQQEAEAQQMEAMEITILKSLGYPNPYE 151


>gi|288959690|ref|YP_003450031.1| metal-dependent hydrolase [Azospirillum sp. B510]
 gi|288911998|dbj|BAI73487.1| metal-dependent hydrolase [Azospirillum sp. B510]
          Length = 168

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 9/164 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+ ++ E   W  +       E +  +A    ++  Y  +E   ELS+V  D   +  L
Sbjct: 5   VDITVSREAGDWAGD------AEWLAERAALAALAATYDDEEGPAELSVVLADDALVHQL 58

Query: 71  NFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           N +YRG DKPTNVLSF          +    +MLGD++LA+E +  EA+  GK  E+HL 
Sbjct: 59  NRDYRGKDKPTNVLSFALTEAEEPEPEEGMPVMLGDVILAFETVVREASEQGKSLEDHLT 118

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           HL++HG LHLLGYDH  D +A  ME LE  +L   GI DPY  +
Sbjct: 119 HLVMHGVLHLLGYDHETDDEAEEMEALETRLLASFGIADPYAAN 162


>gi|170703554|ref|ZP_02894307.1| protein of unknown function UPF0054 [Burkholderia ambifaria
           IOP40-10]
 gi|170131542|gb|EDT00117.1| protein of unknown function UPF0054 [Burkholderia ambifaria
           IOP40-10]
          Length = 261

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 11/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L+L ++V+   +GDEI           K ++  I    F   +  +L++ F       T
Sbjct: 111 ELELDLSVQ---YGDEITGDVRKACPKRKLIAEWIEPALF---SSAQLTVRFVGEEEGRT 164

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D PTNVL+F             ++GD+VL   ++E EA   GK    H  HL
Sbjct: 165 LNDGYRHKDYPTNVLTFAY----DPAPDGTVIGDLVLCCPVVEKEAQEQGKPLAAHYAHL 220

Query: 130 IIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   ++DA  ME LE +IL  LG  +PY+
Sbjct: 221 LVHGALHAQGYDHETSEEDAAEMEALEVAILAKLGFPNPYQ 261


>gi|165976379|ref|YP_001651972.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251112|ref|ZP_07337298.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|165876480|gb|ABY69528.1| hypothetical protein APJL_0970 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302650122|gb|EFL80292.1| putative metalloprotease [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 163

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 8/163 (4%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P +DLQIA EN+      +L +L ++      + L  +         E+++   D  
Sbjct: 1   MTTPMIDLQIACENSE-----NLPSLEQLTLWVQ-TALAYEAQTEDFPETEMTIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESH 112

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL IHG LHLLGYDH++D++A  MEGLE  I++ LG  DPY
Sbjct: 113 WAHLAIHGTLHLLGYDHIEDEEAEEMEGLETEIMQKLGFADPY 155


>gi|300927234|ref|ZP_07142966.1| hypothetical protein HMPREF9548_05209 [Escherichia coli MS 182-1]
 gi|301329191|ref|ZP_07222182.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 78-1]
 gi|300416800|gb|EFK00111.1| hypothetical protein HMPREF9548_05209 [Escherichia coli MS 182-1]
 gi|300844479|gb|EFK72239.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 78-1]
          Length = 155

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A EN     E       E  F   ++ +I +     +   E+++   D+ 
Sbjct: 1   MSQVILDLQLACENNSGLPE-------ESQFQTWLNAVIPQ----FQEESEVTIRVVDTA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H
Sbjct: 50  ESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 108 WAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|240949197|ref|ZP_04753541.1| putative metalloprotease [Actinobacillus minor NM305]
 gi|240296313|gb|EER46957.1| putative metalloprotease [Actinobacillus minor NM305]
          Length = 163

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 8/163 (4%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           + +P +DLQIA EN+      +L +L ++      + L  +         E+++   D  
Sbjct: 1   MTIPMIDLQIACENSE-----NLPSLEQLTLWVK-TALAYEAQTEDFPETEMTIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESH 112

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL IHG LHLLGYDH++D++A  MEGLE  I++ LG  DPY
Sbjct: 113 WAHLAIHGTLHLLGYDHIEDEEAEEMEGLETEIMQKLGFADPY 155


>gi|238791655|ref|ZP_04635293.1| metalloprotease [Yersinia intermedia ATCC 29909]
 gi|238729271|gb|EEQ20787.1| metalloprotease [Yersinia intermedia ATCC 29909]
          Length = 120

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
           + E+++   D      LN  YRG DKPTNVLSFP  F +       +LGD+++  +++E 
Sbjct: 1   MAEVTVRLVDEAESHELNLTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQ 58

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 59  EAIEQEKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 113


>gi|254475005|ref|ZP_05088391.1| diacyglycerol kinase [Ruegeria sp. R11]
 gi|214029248|gb|EEB70083.1| diacyglycerol kinase [Ruegeria sp. R11]
          Length = 189

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/173 (39%), Positives = 93/173 (53%), Gaps = 18/173 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L I++E   W     L T  E +  +A   ++S  + +     E+S++  D  RI  L
Sbjct: 14  MGLDISIEEDRW-----LETDLEPLVIEATEAVLS-HFRLDPEACEISVLACDDARIAVL 67

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N ++R   KPTNVLS+P                 +D    + LGDI +AYE    EA   
Sbjct: 68  NEDFRQKAKPTNVLSWPAEELAAEEPGGTPMAPEADFTGEIPLGDIAIAYETCAREAQEA 127

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +HL HLI+HG LHLLGYDH+ D DA +MEGLE  IL  +GI+DPY V+
Sbjct: 128 GKPLADHLRHLIVHGLLHLLGYDHIRDPDATLMEGLEVEILGKMGIDDPYTVE 180


>gi|28199652|ref|NP_779966.1| putative metalloprotease [Xylella fastidiosa Temecula1]
 gi|170731019|ref|YP_001776452.1| putative metalloprotease [Xylella fastidiosa M12]
 gi|182682398|ref|YP_001830558.1| putative metalloprotease [Xylella fastidiosa M23]
 gi|32130366|sp|Q87AP2|RRMF_XYLFT RecName: Full=Probable rRNA maturation factor
 gi|238687948|sp|B0U4P3|RRMF_XYLFM RecName: Full=Probable rRNA maturation factor
 gi|238691098|sp|B2I8U3|RRMF_XYLF2 RecName: Full=Probable rRNA maturation factor
 gi|28057767|gb|AAO29615.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
 gi|167965812|gb|ACA12822.1| conserved hypothetical protein [Xylella fastidiosa M12]
 gi|182632508|gb|ACB93284.1| protein of unknown function UPF0054 [Xylella fastidiosa M23]
 gi|307578678|gb|ADN62647.1| putative metalloprotease [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 161

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K V+  +      +    +L++   D      LN+ YR  D  TNVLSFP        
Sbjct: 27  FRKWVAATLQ----GRIRKADLAIRIVDEKEGRALNYHYRNKDYATNVLSFPAQLPEPFP 82

Query: 96  --CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                 +LGDIV+   +I  EA   GK    H  HL +HG LHLLG++H D ++A  ME 
Sbjct: 83  KALKIPLLGDIVMCAPVIAREATEQGKSLSAHYAHLTVHGTLHLLGWNHEDHQEADAMEQ 142

Query: 154 LERSILEDLGINDPY 168
           LER IL +LGI+DPY
Sbjct: 143 LEREILANLGISDPY 157


>gi|313201801|ref|YP_004040459.1| hypothetical protein MPQ_2072 [Methylovorus sp. MP688]
 gi|312441117|gb|ADQ85223.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 150

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/161 (34%), Positives = 73/161 (45%), Gaps = 21/161 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+Q+A E A    +   R                          EL+L   D      L
Sbjct: 1   MDVQVASEAANIPADKLFRKWARATLRV---------------DTELALRIVDEDEGRAL 45

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG D  TNVL+FP            ++GDI+L   ++  EA   GK  E H  HL 
Sbjct: 46  NRDYRGKDYATNVLTFPLTE------EPHLMGDIILCAPVVAREAAEQGKPIEAHYAHLT 99

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HG LHL GYDH  +  A +MEGLE  I+  LG +DPY  +
Sbjct: 100 VHGVLHLHGYDHETEPQAELMEGLETEIVTKLGYSDPYAAE 140


>gi|322833886|ref|YP_004213913.1| hypothetical protein Rahaq_3192 [Rahnella sp. Y9602]
 gi|321169087|gb|ADW74786.1| protein of unknown function UPF0054 [Rahnella sp. Y9602]
          Length = 157

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/164 (39%), Positives = 89/164 (54%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           +N   LDLQIA E+A     E   +T  E V  +             +   E+++   D 
Sbjct: 1   MNTVILDLQIACEDAAGLPSENDFQTWLEAVLPQ------------FQEESEVTIRLVDI 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG+DKPTNVLSFP  F +  G    +LGD+++  +++E EA    KE   
Sbjct: 49  PESHELNMTYRGMDKPTNVLSFP--FEAPPGMEMPLLGDLIICRQVVEKEAKEQDKELLA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H++IHG LHLLGYDH+ D++A  ME +E  I++ LG  DPY
Sbjct: 107 HWAHMVIHGSLHLLGYDHIVDEEAEEMESIETEIMQGLGYPDPY 150


>gi|258511950|ref|YP_003185384.1| hypothetical protein Aaci_1983 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478676|gb|ACV58995.1| protein of unknown function UPF0054 [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 157

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 11/163 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +N   +D+   VE  L       +   E V   A   +  +G        E+S++F D  
Sbjct: 1   MNRLSIDVTCEVEWPLPPPHGDAQAFVERVLEAAAERIGVQG--------EVSVLFVDDD 52

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFAS---SDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
            I  LN  YR +D+PT+VLSFP               MLGDIV++ +    +A   G   
Sbjct: 53  AIHELNRTYRQVDRPTDVLSFPMNEGEALADPDDVEPMLGDIVVSVDRAREQAEAYGHSL 112

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           E  +  L++HGFLHL GYDH D+     M GL+  IL+ +G+ 
Sbjct: 113 EREVAFLLVHGFLHLNGYDHEDEAGEREMFGLQEEILQGIGLA 155


>gi|187730605|ref|YP_001879332.1| putative metalloprotease [Shigella boydii CDC 3083-94]
 gi|238691682|sp|B2TU61|RRMF_SHIB3 RecName: Full=Probable rRNA maturation factor YbeY
 gi|187427597|gb|ACD06871.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
          Length = 155

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETKIMLALGYEDPYIAE 153


>gi|194434467|ref|ZP_03066728.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|194417318|gb|EDX33426.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|320178450|gb|EFW53418.1| putative metalloprotease [Shigella boydii ATCC 9905]
 gi|332094331|gb|EGI99382.1| hypothetical protein SB521682_0667 [Shigella boydii 5216-82]
 gi|332096773|gb|EGJ01763.1| hypothetical protein SD15574_0958 [Shigella dysenteriae 155-74]
          Length = 155

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTVRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|197335301|ref|YP_002155519.1| putative metalloprotease [Vibrio fischeri MJ11]
 gi|226702102|sp|B5FBL1|RRMF_VIBFM RecName: Full=Probable rRNA maturation factor
 gi|197316791|gb|ACH66238.1| putative metalloprotease [Vibrio fischeri MJ11]
          Length = 153

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 58/163 (35%), Positives = 79/163 (48%), Gaps = 15/163 (9%)

Query: 10  RLDLQIAVENA-LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            LDLQIA EN      E  L T    V  +             +   EL++   D     
Sbjct: 4   ELDLQIACENENGLPSEKDLMTWLNAVIPQ------------FQPQAELTIRIVDEKESH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG DKPTNVLSFP           L    +++  +++E EA    K    H  H
Sbjct: 52  ELNHEYRGKDKPTNVLSFPFEAPPGLELDLLGD--LIICRQVVEEEAIEQNKPLLAHWAH 109

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +++HG LHLLGYDH++D +A  ME LE  +++ +G  DPY  +
Sbjct: 110 MVVHGSLHLLGYDHIEDDEAEEMESLETELMQGMGFEDPYIAE 152


>gi|300692458|ref|YP_003753453.1| metalloprotease [Ralstonia solanacearum PSI07]
 gi|299079518|emb|CBJ52196.1| Putative metalloprotease [Ralstonia solanacearum PSI07]
          Length = 255

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 58/165 (35%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
                L L + V++   GDE+           K +   I+   F      +L++ F    
Sbjct: 100 AGAEMLTLDLTVQH---GDELKAAARKACPKQKDIEAWIAPALFAD---AQLNVRFVGEE 153

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YR  D  TNVL+F  +    D  S+    DIVL   ++E EA   GK    H
Sbjct: 154 EGRTLNRTYRDKDYATNVLTFSYSETEDDPVSA----DIVLCCPVVEKEAKDQGKPLRAH 209

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             HLI+HG LH  GYDH D  +A  MEGLE  +L  LG  DPY  
Sbjct: 210 YAHLIVHGALHAQGYDHEDPAEAKEMEGLETEVLAGLGFPDPYAD 254


>gi|84687997|ref|ZP_01015860.1| hypothetical protein 1099457000237_RB2654_18208 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84663978|gb|EAQ10479.1| hypothetical protein RB2654_18208 [Rhodobacterales bacterium
           HTCC2654]
          Length = 162

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/165 (38%), Positives = 87/165 (52%), Gaps = 15/165 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+  W   + L  L E   A  ++ L   G        E++L+  D  RI  L
Sbjct: 1   MIVDVVYEDDRWV-ALGLEALAETACAATLAKLGIAG-------AEIALLACDDDRIAAL 52

Query: 71  NFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           N E+R    PTNVLS+P+                 + LGDI +AY+    EA   GK   
Sbjct: 53  NTEFRDKPTPTNVLSWPSEERGADQPGGDPYPPEDMELGDIAIAYDTCAREAAEAGKPMV 112

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +H+ HL++HG LHLLGYDH+DDKDA +MEGLE  IL  +G+ DPY
Sbjct: 113 DHVTHLVVHGTLHLLGYDHIDDKDAALMEGLETEILGKMGLADPY 157


>gi|118590491|ref|ZP_01547893.1| hypothetical protein SIAM614_02911 [Stappia aggregata IAM 12614]
 gi|118436954|gb|EAV43593.1| hypothetical protein SIAM614_02911 [Stappia aggregata IAM 12614]
          Length = 189

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + +++E   W  E  L    E + AKAV+   +          E+SL+FTD   I  LN 
Sbjct: 29  IDLSIEAGDWPAEAQL----EAITAKAVAAAFAGADLEVLEGTEVSLLFTDDASIRQLNA 84

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++R  DK TNVLSFP +    D     +LGDIV AYE +  EA  LG EF +HL HL +H
Sbjct: 85  KWRDKDKATNVLSFPGSDPQGD-VYGPLLGDIVFAYETVAAEAADLGIEFSDHLTHLTVH 143

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           G LHL  YDH + ++A +ME LE++IL  LGI+DPY  
Sbjct: 144 GLLHLFDYDHQESEEAELMESLEKAILASLGIDDPYAD 181


>gi|171321299|ref|ZP_02910261.1| protein of unknown function UPF0054 [Burkholderia ambifaria MEX-5]
 gi|171093426|gb|EDT38609.1| protein of unknown function UPF0054 [Burkholderia ambifaria MEX-5]
          Length = 261

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 12/166 (7%)

Query: 6   VNLPR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
            N PR L+  ++V+   +GDEI           K ++  I    F   +  +L++ F   
Sbjct: 106 ANEPRELEFDLSVQ---YGDEITGDVRKACPKRKLIAEWIEPALF---SSAQLTVRFVGE 159

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               TLN  YR  D PTNVL+F             ++GD+VL   ++E EA+  GK    
Sbjct: 160 EEGRTLNDGYRHKDYPTNVLTFAY----DPAPDGTVIGDLVLCCPVVEKEAHEQGKPLAA 215

Query: 125 HLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           H  HL++HG LH  GYDH   D+DA  ME LE +IL  LG  +PY+
Sbjct: 216 HYAHLLVHGALHAQGYDHETSDEDAAEMEALEVAILAKLGFPNPYQ 261


>gi|52081079|ref|YP_079870.1| putative metalloprotease [Bacillus licheniformis ATCC 14580]
 gi|52786458|ref|YP_092287.1| putative metalloprotease [Bacillus licheniformis ATCC 14580]
 gi|319644963|ref|ZP_07999196.1| metalloprotease [Bacillus sp. BT1B_CT2]
 gi|59799095|sp|Q65H70|RRMF_BACLD RecName: Full=Probable rRNA maturation factor
 gi|52004290|gb|AAU24232.1| Conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|52348960|gb|AAU41594.1| YqfG [Bacillus licheniformis ATCC 14580]
 gi|317392772|gb|EFV73566.1| metalloprotease [Bacillus sp. BT1B_CT2]
          Length = 158

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 14/159 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L I  E     ++        + FA A   +         +  E+S+   ++  I+ +N 
Sbjct: 5   LDITDETGRVPEDRLAEIEKLLQFAAAEEGV--------ADGAEVSVTIVNNEEIQKINK 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           EYRG D PT+V+SF                   +LGDI+++ +    +A   G      L
Sbjct: 57  EYRGKDYPTDVISFALEEDGEGEVEIIGADMPPVLGDIIISVDKAREQAEEYGHSLMREL 116

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L +HGFLHLLGYDH+ +++   M   ++ IL   G++
Sbjct: 117 GFLTVHGFLHLLGYDHMTEEEEKEMFTKQKEILNRYGLS 155


>gi|329296078|ref|ZP_08253414.1| hypothetical protein Pstas_04461 [Plautia stali symbiont]
          Length = 157

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 13/163 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A       DE  L    E  F + +   ++      +   E+++   D  
Sbjct: 1   MSTVILDLQLAC-----ADENGLP--AEAAFQRWLEAAVTP----FQPESEVTIRLVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA   GK  E H
Sbjct: 50  ESHELNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAAEQGKSPEAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             H+++HG LHLLGYDH++D++A  ME LE  I+  LG  DPY
Sbjct: 108 WAHMVVHGTLHLLGYDHIEDEEAEEMEALETEIMLALGYPDPY 150


>gi|85713015|ref|ZP_01044053.1| Predicted metal-dependent hydrolase [Idiomarina baltica OS145]
 gi|85693184|gb|EAQ31144.1| Predicted metal-dependent hydrolase [Idiomarina baltica OS145]
          Length = 156

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 12/161 (7%)

Query: 12  DLQIAVENA-LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           D Q+A E A     +  +    E   A A                EL++   D     +L
Sbjct: 6   DYQVACETASELPQQADIELWVETALALA---------GYDNTEAELTVRVVDPAEGRSL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+R  D  TNVLSFP  F +       +LGD+V+  +++E EA+   K   +H  H++
Sbjct: 57  NHEFRSKDYATNVLSFP--FEAPIEMPIPLLGDLVICAQVVEREADEQQKPLMHHWTHMV 114

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH++D +A  ME +E+  L  L I DPY+++
Sbjct: 115 IHGTLHLLGYDHIEDAEAEHMERIEKDALARLDIPDPYQIN 155


>gi|223041409|ref|ZP_03611612.1| putative metal-dependent hydrolase [Actinobacillus minor 202]
 gi|190692223|gb|ACE87879.1| putative metal-dependent hydrolase [Actinobacillus minor 202]
          Length = 163

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/164 (40%), Positives = 92/164 (56%), Gaps = 10/164 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE-NIVELSLVFTDS 64
           +  P +DLQIA EN+      +L +L +  F   V   ++     +E    E+++   D 
Sbjct: 1   MTTPIIDLQIACENSE-----NLPSLEQ--FMLWVQTALAYEAQTEEFPETEMTIRIVDE 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+
Sbjct: 54  AESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLES 111

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  HL IHG LHLLGYDH++D++A  MEGLE  I++ LG  DPY
Sbjct: 112 HWAHLAIHGTLHLLGYDHIEDEEAEEMEGLETEIMQKLGFADPY 155


>gi|16128642|ref|NP_415192.1| metal-binding heat shock protein required for rRNA maturation
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24112043|ref|NP_706553.1| putative metalloprotease [Shigella flexneri 2a str. 301]
 gi|30062154|ref|NP_836325.1| putative metalloprotease [Shigella flexneri 2a str. 2457T]
 gi|74311195|ref|YP_309614.1| putative metalloprotease [Shigella sonnei Ss046]
 gi|82543103|ref|YP_407050.1| metalloprotease [Shigella boydii Sb227]
 gi|89107528|ref|AP_001308.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|91209702|ref|YP_539688.1| putative metalloprotease [Escherichia coli UTI89]
 gi|110804693|ref|YP_688213.1| putative metalloprotease [Shigella flexneri 5 str. 8401]
 gi|157156781|ref|YP_001461830.1| putative metalloprotease [Escherichia coli E24377A]
 gi|157160147|ref|YP_001457465.1| putative metalloprotease [Escherichia coli HS]
 gi|170020984|ref|YP_001725938.1| putative metalloprotease [Escherichia coli ATCC 8739]
 gi|170080339|ref|YP_001729659.1| hypothetical protein ECDH10B_0728 [Escherichia coli str. K-12
           substr. DH10B]
 gi|188492875|ref|ZP_03000145.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|191168675|ref|ZP_03030455.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|193063449|ref|ZP_03044539.1| conserved hypothetical protein [Escherichia coli E22]
 gi|193069038|ref|ZP_03049996.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194429738|ref|ZP_03062254.1| conserved hypothetical protein [Escherichia coli B171]
 gi|209917921|ref|YP_002292005.1| putative metalloprotease [Escherichia coli SE11]
 gi|218549764|ref|YP_002383555.1| metalloprotease [Escherichia fergusonii ATCC 35469]
 gi|218553201|ref|YP_002386114.1| putative metalloprotease [Escherichia coli IAI1]
 gi|218557590|ref|YP_002390503.1| metalloprotease [Escherichia coli S88]
 gi|218694098|ref|YP_002401765.1| putative metalloprotease [Escherichia coli 55989]
 gi|237707372|ref|ZP_04537853.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238899936|ref|YP_002925732.1| hypothetical protein BWG_0530 [Escherichia coli BW2952]
 gi|256020611|ref|ZP_05434476.1| putative metalloprotease [Shigella sp. D9]
 gi|256023730|ref|ZP_05437595.1| putative metalloprotease [Escherichia sp. 4_1_40B]
 gi|260842885|ref|YP_003220663.1| hypothetical protein ECO103_0666 [Escherichia coli O103:H2 str.
           12009]
 gi|260853910|ref|YP_003227801.1| hypothetical protein ECO26_0734 [Escherichia coli O26:H11 str.
           11368]
 gi|260866807|ref|YP_003233209.1| hypothetical protein ECO111_0689 [Escherichia coli O111:H- str.
           11128]
 gi|291281608|ref|YP_003498426.1| hypothetical protein G2583_0822 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293413953|ref|ZP_06656602.1| metalloprotease ybeY [Escherichia coli B185]
 gi|293418772|ref|ZP_06661207.1| metalloprotease ybeY [Escherichia coli B088]
 gi|300817820|ref|ZP_07098034.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           107-1]
 gi|300823023|ref|ZP_07103157.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           119-7]
 gi|300937872|ref|ZP_07152665.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 21-1]
 gi|300951161|ref|ZP_07165024.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           116-1]
 gi|300959235|ref|ZP_07171310.1| hypothetical protein HMPREF9547_04899 [Escherichia coli MS 175-1]
 gi|301028857|ref|ZP_07192033.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           196-1]
 gi|301643925|ref|ZP_07243952.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           146-1]
 gi|307137275|ref|ZP_07496631.1| putative metalloprotease [Escherichia coli H736]
 gi|307312624|ref|ZP_07592256.1| protein of unknown function UPF0054 [Escherichia coli W]
 gi|309795472|ref|ZP_07689889.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           145-7]
 gi|312970736|ref|ZP_07784917.1| uncharacterized family UPF0054 family protein [Escherichia coli
           1827-70]
 gi|331641162|ref|ZP_08342297.1| putative metalloprotease YbeY [Escherichia coli H736]
 gi|331651672|ref|ZP_08352691.1| putative metalloprotease YbeY [Escherichia coli M718]
 gi|331667014|ref|ZP_08367888.1| putative metalloprotease YbeY [Escherichia coli TA271]
 gi|331672192|ref|ZP_08372984.1| putative metalloprotease YbeY [Escherichia coli TA280]
 gi|331676321|ref|ZP_08377033.1| putative metalloprotease YbeY [Escherichia coli H591]
 gi|332281801|ref|ZP_08394214.1| conserved hypothetical protein [Shigella sp. D9]
 gi|62906654|sp|P0A898|RRMF_ECOLI RecName: Full=Probable rRNA maturation factor YbeY
 gi|62906655|sp|P0A899|RRMF_SHIFL RecName: Full=Probable rRNA maturation factor YbeY
 gi|122424610|sp|Q1REQ7|RRMF_ECOUT RecName: Full=Probable rRNA maturation factor YbeY
 gi|122957569|sp|Q0T6R8|RRMF_SHIF8 RecName: Full=Probable rRNA maturation factor YbeY
 gi|123560316|sp|Q324N6|RRMF_SHIBS RecName: Full=Probable rRNA maturation factor YbeY
 gi|123617771|sp|Q3Z4D3|RRMF_SHISS RecName: Full=Probable rRNA maturation factor YbeY
 gi|166919068|sp|A7ZJ51|RRMF_ECO24 RecName: Full=Probable rRNA maturation factor YbeY
 gi|166919069|sp|A7ZXS8|RRMF_ECOHS RecName: Full=Probable rRNA maturation factor YbeY
 gi|189041073|sp|B1IYE9|RRMF_ECOLC RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704001|sp|B6HYM8|RRMF_ECOSE RecName: Full=Probable rRNA maturation factor YbeY
 gi|226710475|sp|B7MFS5|RRMF_ECO45 RecName: Full=Probable rRNA maturation factor YbeY
 gi|226710477|sp|B7M5I6|RRMF_ECO8A RecName: Full=Probable rRNA maturation factor YbeY
 gi|226710480|sp|B7LKU5|RRMF_ESCF3 RecName: Full=Probable rRNA maturation factor YbeY
 gi|229485211|sp|B1X654|RRMF_ECODH RecName: Full=Probable rRNA maturation factor YbeY
 gi|254807365|sp|B7L9K6|RRMF_ECO55 RecName: Full=Probable rRNA maturation factor YbeY
 gi|259710207|sp|C4ZWE6|RRMF_ECOBW RecName: Full=Probable rRNA maturation factor YbeY
 gi|56554600|pdb|1XM5|A Chain A, Crystal Structure Of Metal-Dependent Hydrolase Ybey From
           E. Coli, Pfam Upf0054
 gi|56554601|pdb|1XM5|B Chain B, Crystal Structure Of Metal-Dependent Hydrolase Ybey From
           E. Coli, Pfam Upf0054
 gi|56554602|pdb|1XM5|C Chain C, Crystal Structure Of Metal-Dependent Hydrolase Ybey From
           E. Coli, Pfam Upf0054
 gi|56554603|pdb|1XM5|D Chain D, Crystal Structure Of Metal-Dependent Hydrolase Ybey From
           E. Coli, Pfam Upf0054
 gi|1778578|gb|AAB40861.1| HI0004 homolog [Escherichia coli]
 gi|1786880|gb|AAC73760.1| metal-binding heat shock protein required for rRNA maturation
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062278|dbj|BAA35314.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|24050866|gb|AAN42260.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040399|gb|AAP16131.1| hypothetical protein S0645 [Shigella flexneri 2a str. 2457T]
 gi|73854672|gb|AAZ87379.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81244514|gb|ABB65222.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|91071276|gb|ABE06157.1| hypothetical protein UTI89_C0657 [Escherichia coli UTI89]
 gi|110614241|gb|ABF02908.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|157065827|gb|ABV05082.1| conserved hypothetical protein [Escherichia coli HS]
 gi|157078811|gb|ABV18519.1| conserved hypothetical protein [Escherichia coli E24377A]
 gi|169755912|gb|ACA78611.1| protein of unknown function UPF0054 [Escherichia coli ATCC 8739]
 gi|169888174|gb|ACB01881.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188488074|gb|EDU63177.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|190901267|gb|EDV61036.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|192931033|gb|EDV83637.1| conserved hypothetical protein [Escherichia coli E22]
 gi|192957582|gb|EDV88027.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194412219|gb|EDX28525.1| conserved hypothetical protein [Escherichia coli B171]
 gi|209776878|gb|ACI86751.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|209776884|gb|ACI86754.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|209911180|dbj|BAG76254.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218350830|emb|CAU96526.1| putative metal-dependent hydrolase [Escherichia coli 55989]
 gi|218357305|emb|CAQ89940.1| putative metal-dependent hydrolase [Escherichia fergusonii ATCC
           35469]
 gi|218359969|emb|CAQ97513.1| putative metal-dependent hydrolase [Escherichia coli IAI1]
 gi|218364359|emb|CAR02034.1| putative metal-dependent hydrolase [Escherichia coli S88]
 gi|226898582|gb|EEH84841.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238860283|gb|ACR62281.1| conserved protein [Escherichia coli BW2952]
 gi|257752559|dbj|BAI24061.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257758032|dbj|BAI29529.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257763163|dbj|BAI34658.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|260450174|gb|ACX40596.1| protein of unknown function UPF0054 [Escherichia coli DH1]
 gi|281600007|gb|ADA72991.1| putative metal-dependent hydrolase [Shigella flexneri 2002017]
 gi|284920459|emb|CBG33520.1| conserved hypothetical protein [Escherichia coli 042]
 gi|290761481|gb|ADD55442.1| conserved hypothetical protein [Escherichia coli O55:H7 str.
           CB9615]
 gi|291325300|gb|EFE64715.1| metalloprotease ybeY [Escherichia coli B088]
 gi|291434011|gb|EFF06984.1| metalloprotease ybeY [Escherichia coli B185]
 gi|294491060|gb|ADE89816.1| conserved hypothetical protein [Escherichia coli IHE3034]
 gi|299878162|gb|EFI86373.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           196-1]
 gi|300314164|gb|EFJ63948.1| hypothetical protein HMPREF9547_04899 [Escherichia coli MS 175-1]
 gi|300449564|gb|EFK13184.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           116-1]
 gi|300457115|gb|EFK20608.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 21-1]
 gi|300524372|gb|EFK45441.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           119-7]
 gi|300529517|gb|EFK50579.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           107-1]
 gi|301077695|gb|EFK92501.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           146-1]
 gi|306907326|gb|EFN37831.1| protein of unknown function UPF0054 [Escherichia coli W]
 gi|307627910|gb|ADN72214.1| putative metalloprotease [Escherichia coli UM146]
 gi|308120847|gb|EFO58109.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           145-7]
 gi|309700897|emb|CBJ00194.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
 gi|310337385|gb|EFQ02523.1| uncharacterized family UPF0054 family protein [Escherichia coli
           1827-70]
 gi|313649695|gb|EFS14119.1| uncharacterized family UPF0054 family protein [Shigella flexneri 2a
           str. 2457T]
 gi|315059913|gb|ADT74240.1| conserved protein [Escherichia coli W]
 gi|315135325|dbj|BAJ42484.1| hypothetical protein ECDH1ME8569_0628 [Escherichia coli DH1]
 gi|315287092|gb|EFU46506.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           110-3]
 gi|315616420|gb|EFU97037.1| uncharacterized family UPF0054 family protein [Escherichia coli
           3431]
 gi|320174709|gb|EFW49841.1| putative metalloprotease [Shigella dysenteriae CDC 74-1112]
 gi|320183047|gb|EFW57912.1| putative metalloprotease [Shigella flexneri CDC 796-83]
 gi|320198215|gb|EFW72819.1| putative metalloprotease [Escherichia coli EC4100B]
 gi|320638109|gb|EFX07873.1| metal-binding heat shock protein [Escherichia coli O157:H7 str.
           G5101]
 gi|320643513|gb|EFX12683.1| metal-binding heat shock protein [Escherichia coli O157:H- str.
           493-89]
 gi|320648848|gb|EFX17475.1| metal-binding heat shock protein [Escherichia coli O157:H- str. H
           2687]
 gi|320654432|gb|EFX22479.1| metal-binding heat shock protein [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320660114|gb|EFX27644.1| metal-binding heat shock protein [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664912|gb|EFX32047.1| metal-binding heat shock protein [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153614|gb|EFZ39862.1| hypothetical protein ECEPECA14_4414 [Escherichia coli EPECa14]
 gi|323158886|gb|EFZ44897.1| hypothetical protein ECE128010_4803 [Escherichia coli E128010]
 gi|323170784|gb|EFZ56434.1| hypothetical protein ECLT68_4849 [Escherichia coli LT-68]
 gi|323179862|gb|EFZ65419.1| hypothetical protein ECOK1180_1271 [Escherichia coli 1180]
 gi|323379523|gb|ADX51791.1| protein of unknown function UPF0054 [Escherichia coli KO11]
 gi|323938420|gb|EGB34674.1| hypothetical protein ERCG_00456 [Escherichia coli E1520]
 gi|323943073|gb|EGB39232.1| hypothetical protein ERDG_00410 [Escherichia coli E482]
 gi|323945134|gb|EGB41196.1| hypothetical protein EREG_03318 [Escherichia coli H120]
 gi|323952770|gb|EGB48638.1| hypothetical protein ERKG_00543 [Escherichia coli H252]
 gi|323958412|gb|EGB54118.1| hypothetical protein ERLG_00402 [Escherichia coli H263]
 gi|323967605|gb|EGB63021.1| hypothetical protein ERJG_01183 [Escherichia coli M863]
 gi|323972113|gb|EGB67327.1| hypothetical protein ERHG_01926 [Escherichia coli TA007]
 gi|323976359|gb|EGB71449.1| hypothetical protein ERFG_02795 [Escherichia coli TW10509]
 gi|324006278|gb|EGB75497.1| hypothetical protein HMPREF9532_04037 [Escherichia coli MS 57-2]
 gi|324016066|gb|EGB85285.1| hypothetical protein HMPREF9542_05327 [Escherichia coli MS 117-3]
 gi|324114780|gb|EGC08748.1| hypothetical protein ERIG_00774 [Escherichia fergusonii B253]
 gi|324116733|gb|EGC10648.1| hypothetical protein ERBG_03409 [Escherichia coli E1167]
 gi|325498162|gb|EGC96021.1| metal-binding heat shock protein required for rRNA maturation
           [Escherichia fergusonii ECD227]
 gi|327254343|gb|EGE65965.1| hypothetical protein ECSTEC7V_0796 [Escherichia coli STEC_7v]
 gi|331037960|gb|EGI10180.1| putative metalloprotease YbeY [Escherichia coli H736]
 gi|331049950|gb|EGI22008.1| putative metalloprotease YbeY [Escherichia coli M718]
 gi|331066238|gb|EGI38122.1| putative metalloprotease YbeY [Escherichia coli TA271]
 gi|331070659|gb|EGI42022.1| putative metalloprotease YbeY [Escherichia coli TA280]
 gi|331076379|gb|EGI47661.1| putative metalloprotease YbeY [Escherichia coli H591]
 gi|332097751|gb|EGJ02725.1| hypothetical protein SB359474_0560 [Shigella boydii 3594-74]
 gi|332104153|gb|EGJ07499.1| conserved hypothetical protein [Shigella sp. D9]
 gi|332760969|gb|EGJ91257.1| hypothetical protein SF434370_0836 [Shigella flexneri 4343-70]
 gi|332761159|gb|EGJ91445.1| hypothetical protein SF274771_0770 [Shigella flexneri 2747-71]
 gi|332763338|gb|EGJ93578.1| hypothetical protein SFK671_0733 [Shigella flexneri K-671]
 gi|332768237|gb|EGJ98422.1| conserved protein involved in translation [Shigella flexneri
           2930-71]
 gi|333007427|gb|EGK26907.1| hypothetical protein SFVA6_1074 [Shigella flexneri VA-6]
 gi|333008105|gb|EGK27581.1| hypothetical protein SFK218_0936 [Shigella flexneri K-218]
 gi|333010075|gb|EGK29510.1| hypothetical protein SFK272_0934 [Shigella flexneri K-272]
 gi|333020906|gb|EGK40166.1| hypothetical protein SFK227_0890 [Shigella flexneri K-227]
 gi|333021512|gb|EGK40762.1| hypothetical protein SFK304_0840 [Shigella flexneri K-304]
          Length = 155

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|71733514|ref|YP_276505.1| metalloprotease [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|123635049|sp|Q48DN6|RRMF_PSE14 RecName: Full=Probable rRNA maturation factor
 gi|71554067|gb|AAZ33278.1| conserved hypothetical protein TIGR00043 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320322686|gb|EFW78779.1| putative metalloprotease [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330529|gb|EFW86508.1| putative metalloprotease [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330873683|gb|EGH07832.1| metal-binding heat shock protein [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 166

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E +   DE   R  CE+   +  ++             EL++   D +    
Sbjct: 3   ELDLQIASETSA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDENEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A A  D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADAPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYAED 150


>gi|330892982|gb|EGH25643.1| metal-binding heat shock protein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 161

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E +   DE   R  CE+   +  ++             EL++   D +    
Sbjct: 3   ELDLQIASETSA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDENEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYAED 150


>gi|119944306|ref|YP_941986.1| hypothetical protein Ping_0533 [Psychromonas ingrahamii 37]
 gi|145558834|sp|A1SSC2|RRMF_PSYIN RecName: Full=Probable rRNA maturation factor
 gi|119862910|gb|ABM02387.1| hypothetical protein UPF0054 [Psychromonas ingrahamii 37]
          Length = 158

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/158 (38%), Positives = 82/158 (51%), Gaps = 9/158 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQIA       D   L       F K +   I  G        EL++   D   I  L
Sbjct: 5   VDLQIAC-----SDPNDLPMPA--SFEKWIEAAILGGSESHREEAELTVRIVDQDEIMQL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YR I K TNVL+FP  F +  G +  +LGD+++  E++E EA + GK    H  H+ 
Sbjct: 58  NHQYRNISKTTNVLAFP--FQNPPGLTLPLLGDLIICKEVVESEAKLQGKSLTAHWAHMS 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IH  LHLLGYDH++  +A  ME LE  +L +LG  DPY
Sbjct: 116 IHSTLHLLGYDHIEQAEAVEMESLETKLLTELGFTDPY 153


>gi|254247271|ref|ZP_04940592.1| hypothetical protein BCPG_02058 [Burkholderia cenocepacia PC184]
 gi|124872047|gb|EAY63763.1| hypothetical protein BCPG_02058 [Burkholderia cenocepacia PC184]
          Length = 270

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 12/165 (7%)

Query: 7   NLPR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           + PR L+L ++V+   +GDEI       +   K ++  I    F      +L++ F   +
Sbjct: 116 DEPRALELDLSVQ---YGDEITSDVRKTLPKRKLIAEWIEPALFA---SAQLTVRFVGEN 169

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA+  GK    H
Sbjct: 170 EGRTLNAGYRHKDYPTNVLTFAYDAAP----DGTVIGDLVLCCPVVEKEAHDQGKPLAAH 225

Query: 126 LVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
             HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 226 YAHLLVHGALHAQGYDHETNDEDAAEMEALEVDILAKLGFPNPYQ 270


>gi|157146731|ref|YP_001454050.1| putative metalloprotease [Citrobacter koseri ATCC BAA-895]
 gi|166228386|sp|A8AJF1|RRMF_CITK8 RecName: Full=Probable rRNA maturation factor
 gi|157083936|gb|ABV13614.1| hypothetical protein CKO_02504 [Citrobacter koseri ATCC BAA-895]
          Length = 155

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E+ +   +E   +T    V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACEDHSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPPGMEMPLLGDLIICRQVVEQEAKEQDKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPY 150


>gi|159043564|ref|YP_001532358.1| hypothetical protein Dshi_1015 [Dinoroseobacter shibae DFL 12]
 gi|189038542|sp|A8LSE3|RRMF_DINSH RecName: Full=Probable rRNA maturation factor
 gi|157911324|gb|ABV92757.1| protein of unknown function UPF0054 [Dinoroseobacter shibae DFL 12]
          Length = 181

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/181 (35%), Positives = 90/181 (49%), Gaps = 18/181 (9%)

Query: 2   SVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVF 61
           +++  +  R  ++IA E+A W D + L  L        +  L      +     E+S++ 
Sbjct: 4   TIRPDDPARATVEIATEDAAW-DALDLEALAGRAVDATLVALD-----LPPAAFEVSILA 57

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------------LGDIVLAYE 109
            D  RI TLN E+RG   PTNVLS+P    + D                  LGD+ LA+ 
Sbjct: 58  CDDARIATLNGEFRGKPTPTNVLSWPAEDRAPDTPGGAPHLPDPGDPMAAELGDLALAHG 117

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               EA   GK   +H+ HLI+HG LHLLG+DH  D DA  MEGLE  IL+ L + +PYE
Sbjct: 118 TCAREAAEAGKPLADHVTHLIVHGTLHLLGFDHETDADAARMEGLEVKILQTLNMANPYE 177

Query: 170 V 170
            
Sbjct: 178 T 178


>gi|218699023|ref|YP_002406652.1| putative metalloprotease [Escherichia coli IAI39]
 gi|226710476|sp|B7NM10|RRMF_ECO7I RecName: Full=Probable rRNA maturation factor YbeY
 gi|218369009|emb|CAR16763.1| putative metal-dependent hydrolase [Escherichia coli IAI39]
          Length = 155

 Score =  170 bits (431), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   DS
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDS 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHCLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|15837505|ref|NP_298193.1| putative metalloprotease [Xylella fastidiosa 9a5c]
 gi|26006920|sp|Q9PEX5|RRMF_XYLFA RecName: Full=Probable rRNA maturation factor
 gi|9105822|gb|AAF83713.1|AE003930_3 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 161

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 6/138 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-- 93
           F K V+  +      +    +L++   D      LN+ YR  D  TNVLSFP        
Sbjct: 27  FRKWVAATLQ----GRIRKADLAIRIVDEKEGRALNYHYRNKDYATNVLSFPAQLPEPLP 82

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                 +LGDIV+   +I  EA   GK    H  HL +HG LHLLG++H D ++A  ME 
Sbjct: 83  KALKIPLLGDIVMCAPVIAREAAEQGKSLSAHYAHLTVHGTLHLLGWNHEDHQEADAMEQ 142

Query: 154 LERSILEDLGINDPYEVD 171
           LER IL +LGI+DPY  +
Sbjct: 143 LEREILANLGISDPYLEE 160


>gi|170767743|ref|ZP_02902196.1| conserved hypothetical protein [Escherichia albertii TW07627]
 gi|170123231|gb|EDS92162.1| conserved hypothetical protein [Escherichia albertii TW07627]
          Length = 155

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGQPEESQFQTWLNAVIPQ------------FQEESEVTIRLVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEQEALEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|189351456|ref|YP_001947084.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           multivorans ATCC 17616]
 gi|189335478|dbj|BAG44548.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 258

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 11/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
             +L ++V+   +GDEI       +   K ++  +    F      ++++ F       T
Sbjct: 108 EQELDLSVQ---YGDEITSEVRKTLPKRKLIAEWLEPALFA---NAQITVRFVGETEGRT 161

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D PTNVL+F             ++GD+VL   ++E EA    K    H  HL
Sbjct: 162 LNAGYRHKDYPTNVLTFAY----DPAPDGTVIGDLVLCCPVVEKEAREQDKPLAAHYAHL 217

Query: 130 IIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY 
Sbjct: 218 LVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYR 258


>gi|169832186|ref|YP_001718168.1| cytidine deaminase [Candidatus Desulforudis audaxviator MP104C]
 gi|169639030|gb|ACA60536.1| cytidine deaminase [Candidatus Desulforudis audaxviator MP104C]
          Length = 301

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
            +  +AV + ++ G       VE+S+   D   I  LN  +RG D+PT+VLSFP      
Sbjct: 20  ALITRAVESALAGG---DRRRVEVSVALVDDEYIHDLNRRFRGQDRPTDVLSFPMGEEEP 76

Query: 94  ---DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
              D    L+LGD+V++      +A   G   +  +  L +HG LHLLGYDH  D+DA  
Sbjct: 77  GAGDEPGVLLLGDVVISLPAAARQAAEYGHGLDREVARLAVHGTLHLLGYDHEQDEDASR 136

Query: 151 MEGLERSILEDLG 163
           M+  E ++L  LG
Sbjct: 137 MQEREDAVLAVLG 149


>gi|163757741|ref|ZP_02164830.1| hypothetical protein HPDFL43_20062 [Hoeflea phototrophica DFL-43]
 gi|162285243|gb|EDQ35525.1| hypothetical protein HPDFL43_20062 [Hoeflea phototrophica DFL-43]
          Length = 171

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/164 (40%), Positives = 91/164 (55%), Gaps = 1/164 (0%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDS 64
           +  P   L +A+E   WGDE  +  L +     A ++L   +         E+SLV  D 
Sbjct: 2   IPEPLFSLALALEAGEWGDEARIEALAQTALEAAAADLTRNEAQPFPSEPPEVSLVLADD 61

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
             +  +N E+R   KPTNVLSFP    +       MLGDI+LA E IE EA  LGK  + 
Sbjct: 62  AMMTGINSEWRAQAKPTNVLSFPAFPLTPGAMPGPMLGDIILARETIEREAGDLGKPVDE 121

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H+ HL++HGFLHL GYDH+ ++DA  ME +E  IL  L ++DPY
Sbjct: 122 HITHLVVHGFLHLFGYDHIQNEDAEKMEAIETRILTSLNLSDPY 165


>gi|220935458|ref|YP_002514357.1| metal-dependent hydrolase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996768|gb|ACL73370.1| metal-dependent hydrolase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 149

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 54/158 (34%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++Q+A E A    E  L       +               E+   + +   D      LN
Sbjct: 6   EIQLASEAADIPVEASLERWAAAAWQ------------GDEDEASVVIRVVDEAESAELN 53

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             YR    PTNVLSFP  F +    +   LGD+V+   ++  EA   GK  E H  H++I
Sbjct: 54  GTYRHKQGPTNVLSFP--FEAPPEFAEGHLGDLVICAPVVLREAAEQGKTAEAHWAHMVI 111

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           HG LHL G+DH++D +A  ME LE+ IL  LG  +PYE
Sbjct: 112 HGMLHLQGHDHIEDAEAARMEALEKEILSGLGYENPYE 149


>gi|289209297|ref|YP_003461363.1| hypothetical protein TK90_2137 [Thioalkalivibrio sp. K90mix]
 gi|288944928|gb|ADC72627.1| protein of unknown function UPF0054 [Thioalkalivibrio sp. K90mix]
          Length = 171

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 48/134 (35%), Positives = 66/134 (49%), Gaps = 1/134 (0%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-DGC 96
            A  +  ++  +      +++L   D+     LN  +RG D  TNVLSFP          
Sbjct: 20  AATLHRAARAAWRGTGRADVALRVVDADEGLELNRGFRGRDYATNVLSFPAPDLPPMAAG 79

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LGDIVL   ++  EA   GK    H  H+++HG LHL G DH +  +A  ME +ER
Sbjct: 80  EPRYLGDIVLCAPVLAREAAEQGKSLRAHYSHMVVHGLLHLQGMDHQESGEAEAMEAVER 139

Query: 157 SILEDLGINDPYEV 170
           SIL  LG  DPY+ 
Sbjct: 140 SILAGLGYPDPYQT 153


>gi|82775936|ref|YP_402283.1| putative metalloprotease [Shigella dysenteriae Sd197]
 gi|309786321|ref|ZP_07680947.1| uncharacterized family UPF0054 family protein [Shigella dysenteriae
           1617]
 gi|123563234|sp|Q32IR3|RRMF_SHIDS RecName: Full=Probable rRNA maturation factor YbeY
 gi|81240084|gb|ABB60794.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308925715|gb|EFP71196.1| uncharacterized family UPF0054 family protein [Shigella dysenteriae
           1617]
          Length = 155

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 91/167 (54%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E++++  D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTILVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|238028584|ref|YP_002912815.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           glumae BGR1]
 gi|237877778|gb|ACR30111.1| Hypothetical protein bglu_1g30480 [Burkholderia glumae BGR1]
          Length = 272

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 11/159 (6%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           +L++ V+   +GDEI       +   K ++  +S          +L++ F        LN
Sbjct: 124 ELELVVQ---YGDEITTAQRKTLPKRKLIAEWLSTSLSAD---AQLTVRFVGEQEGRELN 177

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             YR  D PTNVL+F    A         +GD+V+   ++E EA    K    H  HL++
Sbjct: 178 RGYRKKDYPTNVLTFAYDAAP----DGTTIGDLVICCPVVEKEAAEQDKPLLAHYAHLLV 233

Query: 132 HGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           HG LH  GYDH   ++DA  ME LE  IL  LG  +PY+
Sbjct: 234 HGALHAQGYDHERSEEDAAEMEALETDILAKLGFPNPYQ 272


>gi|217979026|ref|YP_002363173.1| protein of unknown function UPF0054 [Methylocella silvestris BL2]
 gi|254801577|sp|B8ETG9|RRMF_METSB RecName: Full=Probable rRNA maturation factor
 gi|217504402|gb|ACK51811.1| protein of unknown function UPF0054 [Methylocella silvestris BL2]
          Length = 176

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 74/157 (47%), Positives = 95/157 (60%), Gaps = 7/157 (4%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + IAVE   W       TL E V  + +S   +K         E+S+VF D   I  LN 
Sbjct: 5   IDIAVEAEAWESFEDPATLAETVIVQTISQSGAK----LAAEAEISIVFCDDAFIADLNR 60

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++RG+DKPTNVLSFP+    +    + +LGDIV+AYE  E EA   GK F +H+ HLI H
Sbjct: 61  KWRGVDKPTNVLSFPSGGPIA---VTPVLGDIVIAYETTEREAQEAGKPFRDHVAHLIAH 117

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           GFLHL+GYDH+   DA  ME LERS+L  LGI+DPY+
Sbjct: 118 GFLHLIGYDHLAAADAEAMEALERSVLARLGIDDPYQ 154


>gi|300920524|ref|ZP_07136950.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           115-1]
 gi|300412463|gb|EFJ95773.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           115-1]
          Length = 155

 Score =  169 bits (430), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 15/162 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +             +   E+++   D+    +
Sbjct: 6   LDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDTAESHS 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 54  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 112 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|298369902|ref|ZP_06981218.1| metalloprotease [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281362|gb|EFI22851.1| metalloprotease [Neisseria sp. oral taxon 014 str. F0314]
          Length = 171

 Score =  169 bits (430), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 2/137 (1%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SD 94
            K            +    ++SL+  D       N +YRG D  TNVLSF         D
Sbjct: 33  EKDFYRWAWLAVKQRYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPD 92

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
             S  + GD+++  +++  EA   GK  E H  HL +HG LHL+GYDH++D DA  ME L
Sbjct: 93  QFSDGLCGDLIICPQVVFKEAAEQGKTAEQHFAHLTLHGTLHLMGYDHIEDHDAEEMEAL 152

Query: 155 ERSILEDLGINDPYEVD 171
           E  +++ L   +PY  D
Sbjct: 153 EIRLMQALNYPNPYRED 169


>gi|107023630|ref|YP_621957.1| unkown domain/ metalloprotease fusion protein [Burkholderia
           cenocepacia AU 1054]
 gi|116690715|ref|YP_836338.1| putative metalloprotease [Burkholderia cenocepacia HI2424]
 gi|170734058|ref|YP_001766005.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           cenocepacia MC0-3]
 gi|105893819|gb|ABF76984.1| protein of unknown function UPF0054 [Burkholderia cenocepacia AU
           1054]
 gi|116648804|gb|ABK09445.1| protein of unknown function UPF0054 [Burkholderia cenocepacia
           HI2424]
 gi|169817300|gb|ACA91883.1| protein of unknown function UPF0054 [Burkholderia cenocepacia
           MC0-3]
          Length = 258

 Score =  169 bits (430), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 12/165 (7%)

Query: 7   NLPR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           + PR L+L ++V+   +GDEI       +   K ++  I    F      +L++ F   +
Sbjct: 104 DEPRALELDLSVQ---YGDEITSDVRKTLPKRKLIAEWIEPALFA---SAQLTVRFVGEN 157

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA+  GK    H
Sbjct: 158 EGRTLNAGYRHKDYPTNVLTFAYDAAP----DGTVIGDLVLCCPVVEKEAHDQGKPLAAH 213

Query: 126 LVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
             HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 214 YAHLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 258


>gi|295695438|ref|YP_003588676.1| protein of unknown function UPF0054 [Bacillus tusciae DSM 2912]
 gi|295411040|gb|ADG05532.1| protein of unknown function UPF0054 [Bacillus tusciae DSM 2912]
          Length = 162

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 7/137 (5%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E + +  +    S+         E+S+V  D  RI  LN +YRG+D+PT+VLSF     
Sbjct: 20  VERLLSAVLEEAASREGV---EAAEVSVVLVDDERIHELNRDYRGVDRPTDVLSFAMREG 76

Query: 92  SSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             +   +     +LGDIV++ E  E +AN  G      L  L +HGFLHLLGYDH   + 
Sbjct: 77  EGEPVQTEEGRELLGDIVISVETAERQANQYGHSLRRELAFLAVHGFLHLLGYDHQSPEQ 136

Query: 148 ACVMEGLERSILEDLGI 164
             VM G +  +L  LG+
Sbjct: 137 ERVMFGKQEEVLSALGL 153


>gi|257482208|ref|ZP_05636249.1| putative metalloprotease [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289625795|ref|ZP_06458749.1| putative metalloprotease [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648420|ref|ZP_06479763.1| putative metalloprotease [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298489003|ref|ZP_07007026.1| predicted metal-dependent hydrolase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156501|gb|EFH97598.1| predicted metal-dependent hydrolase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330867191|gb|EGH01900.1| metal-binding heat shock protein [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330871079|gb|EGH05788.1| metal-binding heat shock protein [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|331011327|gb|EGH91383.1| metal-binding heat shock protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 166

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E +   DE   R  CE+   +  ++             EL++   D +    
Sbjct: 3   ELDLQIASETSA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDENEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYAED 150


>gi|172061653|ref|YP_001809305.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           ambifaria MC40-6]
 gi|171994170|gb|ACB65089.1| protein of unknown function UPF0054 [Burkholderia ambifaria MC40-6]
          Length = 261

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 11/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L+  ++V+   +GDEI           K ++  I    F   +  +L++ F       T
Sbjct: 111 ELEFDLSVQ---YGDEITGDVRKACPKRKLIAEWIEPALF---SSAQLTVRFVGEEEGRT 164

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D PTNVL+F             ++GD+VL   ++E EA   GK    H  HL
Sbjct: 165 LNDGYRHKDYPTNVLTFAY----DPLPDGTVIGDLVLCCPVVEKEAQEQGKPLAAHYAHL 220

Query: 130 IIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   ++DA  ME LE +IL  LG  +PY+
Sbjct: 221 LVHGALHAQGYDHETSEEDAAEMEALEVAILAKLGFPNPYQ 261


>gi|146329108|ref|YP_001210119.1| hypothetical protein DNO_1243 [Dichelobacter nodosus VCS1703A]
 gi|172047331|sp|A5EXA5|RRMF_DICNV RecName: Full=Probable rRNA maturation factor
 gi|146232578|gb|ABQ13556.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
          Length = 155

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 4/154 (2%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I ++              E    + +   ++      +  +E+++   D+  I  LN EY
Sbjct: 4   IVIDYQTESIPDDWLYPAEWRIQRWLDCALT--VLAIDEALEVTIRLVDNDEITELNAEY 61

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           RG + PTNVLSFP  +   +     +LGDIV+A +I+  EA    K+ E H  H+ IHG 
Sbjct: 62  RGKNAPTNVLSFPCDWDLPE--EPRLLGDIVIAVQIVNQEAKAQKKKMEQHWAHMTIHGL 119

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           LHLL YDH+++K+A +ME LER+IL  LG  DPY
Sbjct: 120 LHLLDYDHIEEKEAQIMEDLERTILAQLGFPDPY 153


>gi|15800372|ref|NP_286384.1| putative metalloprotease [Escherichia coli O157:H7 EDL933]
 gi|15829951|ref|NP_308724.1| metalloprotease [Escherichia coli O157:H7 str. Sakai]
 gi|168752228|ref|ZP_02777250.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758301|ref|ZP_02783308.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764665|ref|ZP_02789672.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168767105|ref|ZP_02792112.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777601|ref|ZP_02802608.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779149|ref|ZP_02804156.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786508|ref|ZP_02811515.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168802432|ref|ZP_02827439.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|195939396|ref|ZP_03084778.1| putative metalloprotease [Escherichia coli O157:H7 str. EC4024]
 gi|208808538|ref|ZP_03250875.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816422|ref|ZP_03257601.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822844|ref|ZP_03263162.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209397406|ref|YP_002269294.1| hypothetical protein ECH74115_0752 [Escherichia coli O157:H7 str.
           EC4115]
 gi|217326196|ref|ZP_03442280.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254791822|ref|YP_003076659.1| putative metalloprotease [Escherichia coli O157:H7 str. TW14359]
 gi|261224127|ref|ZP_05938408.1| hypothetical protein EscherichiacoliO157_05909 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257821|ref|ZP_05950354.1| hypothetical protein EscherichiacoliO157EcO_18684 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|26006914|sp|Q8XBK1|RRMF_ECO57 RecName: Full=Probable rRNA maturation factor YbeY
 gi|226704000|sp|B5YQL0|RRMF_ECO5E RecName: Full=Probable rRNA maturation factor YbeY
 gi|12513568|gb|AAG54992.1|AE005245_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13360155|dbj|BAB34120.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767195|gb|EDU31039.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188013886|gb|EDU52008.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189002868|gb|EDU71854.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354845|gb|EDU73264.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363348|gb|EDU81767.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365375|gb|EDU83791.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373611|gb|EDU92027.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189375556|gb|EDU93972.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208728339|gb|EDZ77940.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733070|gb|EDZ81758.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208737037|gb|EDZ84721.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158806|gb|ACI36239.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209776880|gb|ACI86752.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|209776882|gb|ACI86753.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|209776886|gb|ACI86755.1| hypothetical protein ECs0697 [Escherichia coli]
 gi|217322417|gb|EEC30841.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254591222|gb|ACT70583.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|320193065|gb|EFW67705.1| putative metalloprotease [Escherichia coli O157:H7 str. EC1212]
 gi|326341409|gb|EGD65201.1| putative metalloprotease [Escherichia coli O157:H7 str. 1044]
 gi|326345811|gb|EGD69550.1| putative metalloprotease [Escherichia coli O157:H7 str. 1125]
          Length = 155

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQMVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|115352799|ref|YP_774638.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           ambifaria AMMD]
 gi|115282787|gb|ABI88304.1| protein of unknown function UPF0054 [Burkholderia ambifaria AMMD]
          Length = 261

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 11/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L+  ++V+   +GDE+           K ++  I    F   +  +L++ F       T
Sbjct: 111 ELEFDLSVQ---YGDEVTGDVRKACPKRKLIAEWIEPALF---SSAQLTVRFVGEEEGRT 164

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D PTNVL+F             ++GD+VL   ++E EA   GK    H  HL
Sbjct: 165 LNDGYRHKDYPTNVLTFAY----DPLPDGTVIGDLVLCCPVVEKEAQEQGKPLAAHYAHL 220

Query: 130 IIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   ++DA  ME LE +IL  LG  +PY+
Sbjct: 221 LVHGALHAQGYDHETSEEDAAEMEALEVAILAKLGFPNPYQ 261


>gi|149192274|ref|ZP_01870486.1| hypothetical protein VSAK1_11415 [Vibrio shilonii AK1]
 gi|148833889|gb|EDL50914.1| hypothetical protein VSAK1_11415 [Vibrio shilonii AK1]
          Length = 154

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIAVE+     E  L +  E          + K     +   EL++   D    + 
Sbjct: 4   ELDLQIAVES-----EQGLPSADE------FQGWLDKTITPFQQDAELTIRIVDEEESQQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNRDYRGKDKPTNVLSFP--FEAPPGVEMDLLGDMIICRQVVEKEAIEQSKPLIAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I+ D+G +DPY V+
Sbjct: 111 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLDMGFDDPYLVE 152


>gi|206559302|ref|YP_002230063.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           cenocepacia J2315]
 gi|198035340|emb|CAR51215.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 258

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 12/165 (7%)

Query: 7   NLPR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           + PR L+L ++V+   +GDEI       +   K ++  +    F      +L++ F   +
Sbjct: 104 DEPRALELDLSVQ---YGDEITSDVRKTLPKRKLIAEWLEPALFA---SAQLTVRFVGEN 157

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA+  GK    H
Sbjct: 158 EGRTLNAGYRHKDYPTNVLTFAYDAAP----DGTVIGDLVLCCPVVEKEAHDQGKPLMAH 213

Query: 126 LVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
             HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 214 YAHLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 258


>gi|262374160|ref|ZP_06067437.1| metal-dependent hydrolase [Acinetobacter junii SH205]
 gi|262311171|gb|EEY92258.1| metal-dependent hydrolase [Acinetobacter junii SH205]
          Length = 161

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 8/164 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++     +++ L+        K +   +    F  +   E+ +   D      L
Sbjct: 1   MKINLSLQQDFQANDLPLK---RGQIKKQIETALRHVGF--DADCEIGIACVDLAESHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG--CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +  LGD+V+   ++  EA    K   +H  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEMLSLLEAEPLGDLVICIPVVLQEAAEQQKTPSDHFTH 115

Query: 129 LIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGINDPYEVD 171
           L++HG LHLLGYDH   + +A  ME LE  IL+ LGI++PY+ D
Sbjct: 116 LLVHGILHLLGYDHETSEVEAEEMEALEIEILKKLGISNPYQAD 159


>gi|26246634|ref|NP_752674.1| putative metalloprotease [Escherichia coli CFT073]
 gi|110640881|ref|YP_668609.1| putative metalloprotease [Escherichia coli 536]
 gi|170681098|ref|YP_001742777.1| putative metalloprotease [Escherichia coli SMS-3-5]
 gi|191173958|ref|ZP_03035476.1| conserved hypothetical protein [Escherichia coli F11]
 gi|215485692|ref|YP_002328123.1| putative metalloprotease [Escherichia coli O127:H6 str. E2348/69]
 gi|227884367|ref|ZP_04002172.1| metal-dependent hydrolase [Escherichia coli 83972]
 gi|293408784|ref|ZP_06652623.1| metalloprotease [Escherichia coli B354]
 gi|300989981|ref|ZP_07179057.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 45-1]
 gi|300996643|ref|ZP_07181501.1| hypothetical protein HMPREF9553_04968 [Escherichia coli MS 200-1]
 gi|301025207|ref|ZP_07188778.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 69-1]
 gi|301049851|ref|ZP_07196789.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           185-1]
 gi|306812917|ref|ZP_07447110.1| putative metalloprotease [Escherichia coli NC101]
 gi|312965100|ref|ZP_07779337.1| uncharacterized family UPF0054 family protein [Escherichia coli
           2362-75]
 gi|331645816|ref|ZP_08346919.1| putative metalloprotease YbeY [Escherichia coli M605]
 gi|331656681|ref|ZP_08357643.1| putative metalloprotease YbeY [Escherichia coli TA206]
 gi|331682077|ref|ZP_08382701.1| putative metalloprotease YbeY [Escherichia coli H299]
 gi|29428208|sp|Q8FJY3|RRMF_ECOL6 RecName: Full=Probable rRNA maturation factor YbeY
 gi|123049385|sp|Q0TK21|RRMF_ECOL5 RecName: Full=Probable rRNA maturation factor YbeY
 gi|226710479|sp|B1LLB0|RRMF_ECOSM RecName: Full=Probable rRNA maturation factor YbeY
 gi|254807364|sp|B7UKU2|RRMF_ECO27 RecName: Full=Probable rRNA maturation factor YbeY
 gi|26107033|gb|AAN79217.1|AE016757_121 Hypothetical protein ybeY [Escherichia coli CFT073]
 gi|110342473|gb|ABG68710.1| hypothetical protein YbeY [Escherichia coli 536]
 gi|170518816|gb|ACB16994.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
 gi|190905734|gb|EDV65355.1| conserved hypothetical protein [Escherichia coli F11]
 gi|215263764|emb|CAS08100.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|222032412|emb|CAP75151.1| metalloprotease ybeY [Escherichia coli LF82]
 gi|227838453|gb|EEJ48919.1| metal-dependent hydrolase [Escherichia coli 83972]
 gi|281177807|dbj|BAI54137.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|291471962|gb|EFF14445.1| metalloprotease [Escherichia coli B354]
 gi|300298385|gb|EFJ54770.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           185-1]
 gi|300304472|gb|EFJ58992.1| hypothetical protein HMPREF9553_04968 [Escherichia coli MS 200-1]
 gi|300396159|gb|EFJ79697.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 69-1]
 gi|300407256|gb|EFJ90794.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 45-1]
 gi|305853680|gb|EFM54119.1| putative metalloprotease [Escherichia coli NC101]
 gi|307552523|gb|ADN45298.1| putative metal-dependent hydrolase YbeY [Escherichia coli ABU
           83972]
 gi|312290191|gb|EFR18074.1| uncharacterized family UPF0054 family protein [Escherichia coli
           2362-75]
 gi|312945199|gb|ADR26026.1| putative metalloprotease [Escherichia coli O83:H1 str. NRG 857C]
 gi|315292082|gb|EFU51434.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           153-1]
 gi|315299191|gb|EFU58445.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 16-3]
 gi|320194165|gb|EFW68797.1| putative metalloprotease [Escherichia coli WV_060327]
 gi|323191292|gb|EFZ76556.1| hypothetical protein ECRN5871_0581 [Escherichia coli RN587/1]
 gi|324010386|gb|EGB79605.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS 60-1]
 gi|330910416|gb|EGH38926.1| metal-dependent hydrolase [Escherichia coli AA86]
 gi|331044568|gb|EGI16695.1| putative metalloprotease YbeY [Escherichia coli M605]
 gi|331054929|gb|EGI26938.1| putative metalloprotease YbeY [Escherichia coli TA206]
 gi|331080756|gb|EGI51930.1| putative metalloprotease YbeY [Escherichia coli H299]
          Length = 155

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME +E  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEAIETEIMLALGYEDPYIAE 153


>gi|238762865|ref|ZP_04623833.1| metalloprotease [Yersinia kristensenii ATCC 33638]
 gi|238698876|gb|EEP91625.1| metalloprotease [Yersinia kristensenii ATCC 33638]
          Length = 130

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD 103
           +       + + E+++   D      LN  YRG DKPTNVLSFP  F +       +LGD
Sbjct: 1   MEAVLPQFQEVSEVTIRVVDEAESHELNLTYRGKDKPTNVLSFP--FEAPPEIELPLLGD 58

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +++  +++E EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I+++LG
Sbjct: 59  LIICRQVVEQEAVEQEKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQNLG 118

Query: 164 INDPY 168
             DPY
Sbjct: 119 YPDPY 123


>gi|218288622|ref|ZP_03492899.1| protein of unknown function UPF0054 [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241279|gb|EED08454.1| protein of unknown function UPF0054 [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 157

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 11/163 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +N   +D+   VE  L       +   E V   A   +  +G        E+S++F +  
Sbjct: 1   MNRLSIDVTCEVEWPLTPPHGDAQAFVERVLEAAAERIGVRG--------EVSVLFVNDD 52

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
            I  LN  YR +D+PT+VLSFP               MLGDIV++ +    +A   G   
Sbjct: 53  AIHELNRTYRQVDRPTDVLSFPMNEGEELADPDEVDPMLGDIVVSVDRAREQAEAYGHSL 112

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           E  +  L++HGFLHL GYDH D+     M GL+  IL+ +G++
Sbjct: 113 EREVAFLLVHGFLHLNGYDHEDEAGEREMFGLQEEILQGIGLS 155


>gi|13474616|ref|NP_106185.1| hypothetical protein mlr5536 [Mesorhizobium loti MAFF303099]
 gi|26006933|sp|Q98BK1|RRMF_RHILO RecName: Full=Probable rRNA maturation factor
 gi|14025370|dbj|BAB51971.1| mlr5536 [Mesorhizobium loti MAFF303099]
          Length = 166

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/161 (45%), Positives = 92/161 (57%), Gaps = 6/161 (3%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P +D+ I+VE   W DE  L  L +     A +     G        ELS+VF+D   I 
Sbjct: 12  PPVDIDISVEAGDWPDEAGLARLVDRAVDAAFAETGVTGR------SELSVVFSDDAHIR 65

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN E+RG DKPTNVLSFP    +  G    MLGDIVLA E +  EA +  K  +NH+ H
Sbjct: 66  TLNAEWRGKDKPTNVLSFPAFPFAQGGPLPPMLGDIVLAAETVSREAALEDKPVQNHITH 125

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           L+IHG LHLLG+DH  D +A  ME +ER+ L  L I DPY 
Sbjct: 126 LVIHGLLHLLGHDHETDAEAEAMEAIERAALARLAIPDPYA 166


>gi|323163922|gb|EFZ49731.1| hypothetical protein SS53G_5761 [Shigella sonnei 53G]
 gi|323184986|gb|EFZ70353.1| hypothetical protein ECOK1357_1645 [Escherichia coli 1357]
          Length = 152

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 15/162 (9%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A E N+   +E   +T    V  +             +   E+++   D+    +
Sbjct: 3   LDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDTAESHS 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E H  H+
Sbjct: 51  LNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 109 VVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 150


>gi|238795392|ref|ZP_04638907.1| metalloprotease [Yersinia mollaretii ATCC 43969]
 gi|238720511|gb|EEQ12312.1| metalloprotease [Yersinia mollaretii ATCC 43969]
          Length = 127

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 2/119 (1%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
             + + E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +
Sbjct: 4   QFQAVSEVTIRLVDEAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQ 61

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++E EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 62  VVEQEAVEQEKALFAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 120


>gi|56708799|ref|YP_164840.1| hypothetical protein SPOA0008 [Ruegeria pomeroyi DSS-3]
 gi|59799077|sp|Q5LLL4|RRMF_SILPO RecName: Full=Probable rRNA maturation factor
 gi|56680484|gb|AAV97149.1| conserved hypothetical protein TIGR00043 [Ruegeria pomeroyi DSS-3]
          Length = 165

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 20/173 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L + +E+  W     L  L +   +  ++ +      +   + E+SL+  D  RI  L
Sbjct: 1   MTLDLTLEDPRW---TILPPLADRAISATLAQM-----GLDPELCEISLLGCDDARITAL 52

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R    PTNVLS+P                  D   ++ LGDI +A++  + EA+  
Sbjct: 53  NAEFREKPSPTNVLSWPAEDLAAETPGGTPLAPEPDFTGAVPLGDIAIAFDTCQREADAA 112

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +H+ HLI+HG LHLLGYDH+ D+DA +MEGLE  IL +LGI+DPY ++
Sbjct: 113 GKPIADHVTHLIVHGLLHLLGYDHIRDEDATLMEGLETRILGNLGIDDPYTME 165


>gi|289675769|ref|ZP_06496659.1| putative metalloprotease [Pseudomonas syringae pv. syringae FF5]
 gi|330895568|gb|EGH27876.1| metal-binding heat shock protein [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330976850|gb|EGH76881.1| metal-binding heat shock protein [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 166

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 87/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E +   DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQIASETSA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNNTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSIDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|284159397|ref|YP_441146.3| hypothetical protein BTH_I0589 [Burkholderia thailandensis E264]
 gi|123537980|sp|Q2T103|RRMF_BURTA RecName: Full=Probable rRNA maturation factor
 gi|83655057|gb|ABC39120.1| conserved hypothetical protein TIGR00043, putative [Burkholderia
           thailandensis E264]
          Length = 437

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 288 PELDLAV-----QYGDEIGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 339

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 340 TLNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 395

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 396 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 437


>gi|66047574|ref|YP_237415.1| putative metalloprotease [Pseudomonas syringae pv. syringae B728a]
 gi|75500575|sp|Q4ZN95|RRMF_PSEU2 RecName: Full=Probable rRNA maturation factor
 gi|63258281|gb|AAY39377.1| Protein of unknown function UPF0054 [Pseudomonas syringae pv.
           syringae B728a]
 gi|330969454|gb|EGH69520.1| metal-binding heat shock protein [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 166

 Score =  169 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E +   DE  LR  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVASETSA-PDEARLRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNNTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSVDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|330963482|gb|EGH63742.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 166

 Score =  169 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E     DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVASETPA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|323143880|ref|ZP_08078544.1| translation metalloprotein YbeY [Succinatimonas hippei YIT 12066]
 gi|322416352|gb|EFY07022.1| translation metalloprotein YbeY [Succinatimonas hippei YIT 12066]
          Length = 157

 Score =  169 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/158 (41%), Positives = 88/158 (55%), Gaps = 11/158 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DLQ+A++      +  L  + E+    A S LI   Y       E+++    S  I+ L
Sbjct: 5   IDLQVAID-----PKESLPDIDELTLW-AKSALIGADY---HKDSEITVRIVASDEIQEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N EYR  D PTN+LSFP  F   D     +LGD+++  EI+  EA V  K ++ H  HLI
Sbjct: 56  NREYRHKDCPTNILSFP--FECPDVIDLPLLGDLIICDEIVRREAKVQEKTYKEHFAHLI 113

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++ KDA  ME LE  I+  LG  DPY
Sbjct: 114 VHGCLHLLGYDHIEAKDAAKMEPLEVKIITKLGYPDPY 151


>gi|325981204|ref|YP_004293606.1| hypothetical protein NAL212_0499 [Nitrosomonas sp. AL212]
 gi|325530723|gb|ADZ25444.1| protein of unknown function UPF0054 [Nitrosomonas sp. AL212]
          Length = 168

 Score =  169 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/166 (33%), Positives = 71/166 (42%), Gaps = 21/166 (12%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           V++ N  RL +Q A E          R   +V   +                 E+ L   
Sbjct: 15  VQRANSFRLMVQYATECTAVPGRPQFRRWAKVALMQ---------------EAEVVLRLV 59

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D      LN ++R  +  TNVL+F    A        + GDI+L   +I  EA    K  
Sbjct: 60  DEKEGRELNQQFRNKNYATNVLTFVYDDAEP------LTGDIILCAPVISEEAQQQNKNL 113

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             H  HL IHG LHL GYDH++D DA  ME LE  IL  LG  +PY
Sbjct: 114 MAHYAHLTIHGLLHLQGYDHIEDSDATAMEQLEIQILTKLGFTNPY 159


>gi|325267029|ref|ZP_08133699.1| metal-dependent hydrolase [Kingella denitrificans ATCC 33394]
 gi|324981529|gb|EGC17171.1| metal-dependent hydrolase [Kingella denitrificans ATCC 33394]
          Length = 167

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 6/139 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F + + + +   Y       ELSLV  D       N +YRG D  TNVLSF     
Sbjct: 33  DEKQFYRWIWHALKSHY----RRAELSLVLLDEEEARAYNRDYRGKDYATNVLSFALNEG 88

Query: 92  SS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
            S        + GD+++  +++  EA   GK   +H  HL+IHG LHL+G+DH++D+DA 
Sbjct: 89  ESMFADTQDTLYGDLIICPQVVAREAAEQGKPLHHHFAHLVIHGTLHLMGFDHIEDEDAD 148

Query: 150 VMEGLERSILEDLGINDPY 168
            ME LE  +L  L I +PY
Sbjct: 149 QMEALEIELLRQLNIPNPY 167


>gi|238790780|ref|ZP_04634539.1| metalloprotease [Yersinia frederiksenii ATCC 33641]
 gi|238721138|gb|EEQ12819.1| metalloprotease [Yersinia frederiksenii ATCC 33641]
          Length = 127

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 2/119 (1%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
             + + E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +
Sbjct: 4   QFQEVAEVTIRLVDEAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQ 61

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++E EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I+++LG  DPY
Sbjct: 62  VVEQEAVEQDKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQNLGYPDPY 120


>gi|254284310|ref|ZP_04959278.1| putative metalloprotease BUsg_427 [gamma proteobacterium NOR51-B]
 gi|219680513|gb|EED36862.1| putative metalloprotease BUsg_427 [gamma proteobacterium NOR51-B]
          Length = 162

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 2/142 (1%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            L    +  F++ V+  +  G        E+S+       I   N +YR  ++PTNVLSF
Sbjct: 12  GLEAPDDDSFSRWVNAALVSGQHAGCFTPEVSVRIAGEREITAFNQQYRDRNRPTNVLSF 71

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           P +        S +LGDIV+   ++  EA       E+H  HL +HG LHLLG+DH+ D 
Sbjct: 72  PASVPPE--VESGLLGDIVICAPVVIAEAREQECSLESHWAHLTVHGTLHLLGFDHIRDD 129

Query: 147 DACVMEGLERSILEDLGINDPY 168
           +A +ME LE S L +LG  +PY
Sbjct: 130 EAEIMEALEVSALAELGFGNPY 151


>gi|28871921|ref|NP_794540.1| hypothetical protein PSPTO_4806 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|37999558|sp|Q87VX9|RRMF_PSESM RecName: Full=Probable rRNA maturation factor
 gi|28855174|gb|AAO58235.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 166

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E     DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQIASETPA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|148555304|ref|YP_001262886.1| hypothetical protein Swit_2389 [Sphingomonas wittichii RW1]
 gi|166228577|sp|A5V8Y2|RRMF_SPHWW RecName: Full=Probable rRNA maturation factor
 gi|148500494|gb|ABQ68748.1| protein of unknown function UPF0054 [Sphingomonas wittichii RW1]
          Length = 169

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/165 (36%), Positives = 82/165 (49%), Gaps = 7/165 (4%)

Query: 13  LQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           +++AV+    W D      L       A+             + E+S+  TD   +  LN
Sbjct: 2   IEVAVQAEPDWADGTDWERLAIEAVTAAMRTTPHAAMLDAAYMAEVSIRLTDDDEVHALN 61

Query: 72  FEYRGIDKPTNVLSFPT------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            +YR  DKPTNVLSFP           +     ++LGDI+LA  +   EA   G     H
Sbjct: 62  RQYRQKDKPTNVLSFPMVQDDLIEGLDNSDDGEVLLGDIILARGVCVREAAEKGVPTAEH 121

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             HLI+HG LHLLGYDH++D +A  ME LER  L  LGI+DPY +
Sbjct: 122 ATHLIVHGTLHLLGYDHIEDDEAEAMEDLERVALATLGIDDPYAI 166


>gi|56550970|ref|YP_161809.1| hypothetical protein ZMO0074 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761440|ref|ZP_04759528.1| protein of unknown function UPF0054 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753355|ref|YP_003226248.1| hypothetical protein Za10_1119 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|59799005|sp|Q5NRF6|RRMF_ZYMMO RecName: Full=Probable rRNA maturation factor
 gi|56542544|gb|AAV88698.1| protein of unknown function UPF0054 [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374347|gb|EER63844.1| protein of unknown function UPF0054 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552718|gb|ACV75664.1| protein of unknown function UPF0054 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 176

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 9/165 (5%)

Query: 15  IAVE---NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           I VE   + LW ++ +   L +    +AVS   S     K+   E+S+ F+D+  +  LN
Sbjct: 2   ITVEADISDLWPEQSNWEALAQTACQQAVSVSASDFLLAKDYETEISVCFSDNDTVHALN 61

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAYEIIEIEANVLGKEFENH 125
             +R  D+PTNVLSFP   A           S  +LGDI+LA+++ + EA   G   ENH
Sbjct: 62  KTWRDKDRPTNVLSFPMMEAEELAEIKNRVGSECLLGDIILAFDVAKKEALEKGISLENH 121

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           + HLI HG LHLLGYDH+ D +A +ME LER  L  L I DPY  
Sbjct: 122 VTHLITHGTLHLLGYDHILDNEAEIMEDLERKALAQLDIPDPYSD 166


>gi|332975865|gb|EGK12743.1| metal-dependent hydrolase [Desmospora sp. 8437]
          Length = 157

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSS 98
           L+      +    E+++   D   I  LN EYR +D+PT+VLSFP      +        
Sbjct: 28  LMQAAETEQTPPAEVAVTIVDDEEIHRLNREYRQVDRPTDVLSFPQWEPGEEWGSPEGEP 87

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L LGDIV++      +A   G   E  L  L +HGFLHLLGYDH  D++   M   + +I
Sbjct: 88  LPLGDIVISLPRAREQAAQYGHSLERELGFLAVHGFLHLLGYDHGTDEEEEEMFSRQEAI 147

Query: 159 LEDLGIN 165
           L  +G+ 
Sbjct: 148 LSRVGLT 154


>gi|330944991|gb|EGH46777.1| metal-binding heat shock protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 166

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 87/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E +   DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQIASETSA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNNTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSIDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|56476161|ref|YP_157750.1| hypothetical protein ebA1336 [Aromatoleum aromaticum EbN1]
 gi|62901202|sp|Q5P762|RRMF_AROAE RecName: Full=Probable rRNA maturation factor
 gi|56312204|emb|CAI06849.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 154

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 14/157 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L + V+ A+ G E   R+    +  +     +           E+++          LN 
Sbjct: 12  LALTVQRAI-GAENRARSPTSALIRRWALAAL-------RGDAEMTVRLVGEAEGRRLNR 63

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +YRG D  TNVL+F    +        + GD+VL   ++  EA   GK  E H  HLI+H
Sbjct: 64  DYRGKDYATNVLTFVYDESE------RLAGDLVLCVPVVAREAAEQGKPLEAHFAHLIVH 117

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           G LHL G+DH    +A  ME LE  +L  LG  +PY 
Sbjct: 118 GMLHLQGFDHEAPDEAEEMETLETRVLATLGYPNPYA 154


>gi|241662039|ref|YP_002980399.1| unkown domain/ metalloprotease fusion protein [Ralstonia pickettii
           12D]
 gi|240864066|gb|ACS61727.1| protein of unknown function UPF0054 [Ralstonia pickettii 12D]
          Length = 270

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/165 (36%), Positives = 79/165 (47%), Gaps = 10/165 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
                L L + V+   +GDE+       +   + +   I+   F      +L++ F    
Sbjct: 115 AGAEMLTLDLTVQ---YGDELKAAARKALPKERDIEAWIAPALFAD---AQLNVRFVGEE 168

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YRG D  TNVL+F  A ++ D  S+    DIVL   ++E EA    K    H
Sbjct: 169 EGRTLNRTYRGKDYATNVLTFSYAESAEDPVSA----DIVLCCAVVEKEAKEQKKPLTAH 224

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             HLI+HG LH  GYDH D  DA  MEG+E  IL DLG  DPY  
Sbjct: 225 YAHLIVHGALHAQGYDHEDAADAKEMEGIETEILRDLGFADPYAD 269


>gi|218703992|ref|YP_002411511.1| putative metalloprotease [Escherichia coli UMN026]
 gi|293403920|ref|ZP_06647914.1| metalloprotease [Escherichia coli FVEC1412]
 gi|298379695|ref|ZP_06989300.1| metalloprotease ybeY [Escherichia coli FVEC1302]
 gi|300901172|ref|ZP_07119276.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           198-1]
 gi|331662026|ref|ZP_08362949.1| putative metalloprotease YbeY [Escherichia coli TA143]
 gi|226710478|sp|B7N9R4|RRMF_ECOLU RecName: Full=Probable rRNA maturation factor YbeY
 gi|218431089|emb|CAR11965.1| putative metal-dependent hydrolase [Escherichia coli UMN026]
 gi|291428506|gb|EFF01531.1| metalloprotease [Escherichia coli FVEC1412]
 gi|298279393|gb|EFI20901.1| metalloprotease ybeY [Escherichia coli FVEC1302]
 gi|300355386|gb|EFJ71256.1| conserved hypothetical protein TIGR00043 [Escherichia coli MS
           198-1]
 gi|331060448|gb|EGI32412.1| putative metalloprotease YbeY [Escherichia coli TA143]
          Length = 155

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLIYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 153


>gi|126735011|ref|ZP_01750757.1| hypothetical protein RCCS2_14079 [Roseobacter sp. CCS2]
 gi|126715566|gb|EBA12431.1| hypothetical protein RCCS2_14079 [Roseobacter sp. CCS2]
          Length = 166

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 18/171 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +   VE+  WGD   +  L ++    A+  L      ++ ++ E+S++  D  RI  L
Sbjct: 1   MTVDCVVEDPRWGD---INALAQIATDAALERL-----GLESSVFEISVLACDDARIAVL 52

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N  +RG  KPTNVLS+P+             +        LGDI +A++    EA   GK
Sbjct: 53  NEGFRGKPKPTNVLSWPSDERAAAIDGEMPLAPRPGPDNELGDIAIAFDTCTREAAEAGK 112

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             ++H +HL++HG LHLLG+DH  D+DA +MEGLE  IL  LGI DPY  +
Sbjct: 113 TMQDHTIHLLVHGTLHLLGFDHERDRDATLMEGLETEILGKLGIPDPYRDE 163


>gi|330953008|gb|EGH53268.1| metal-binding heat shock protein [Pseudomonas syringae Cit 7]
          Length = 166

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 87/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E +   DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQIASETSA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAVEQGKSVDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|146308796|ref|YP_001189261.1| putative metalloprotease [Pseudomonas mendocina ymp]
 gi|166990901|sp|A4XYW3|RRMF_PSEMY RecName: Full=Probable rRNA maturation factor
 gi|145576997|gb|ABP86529.1| protein of unknown function UPF0054 [Pseudomonas mendocina ymp]
          Length = 151

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 83/162 (51%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A  +    DE  LR  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQLAS-DGQHPDEAQLRRWCELALRQRTAD------------SELTIRLVDEEEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP            +LGD+V+   ++E EA   GK  E H  HL
Sbjct: 50  LNRTWRHKDYATNVLSFPAEIPDGI-LDIPLLGDLVICVPVLEREAAEQGKTLEAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+++ +A  ME LER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIEEDEALEMEELERQLLAELGHPDPYAGD 150


>gi|254482458|ref|ZP_05095697.1| conserved hypothetical protein TIGR00043, putative [marine gamma
           proteobacterium HTCC2148]
 gi|214037149|gb|EEB77817.1| conserved hypothetical protein TIGR00043, putative [marine gamma
           proteobacterium HTCC2148]
          Length = 159

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 11  LDLQIAVENAL---WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           ++LQ+ ++NA      DE  +R     V +             +    E+S+   D   +
Sbjct: 1   MNLQVDIQNASGESAPDEEDIRGWISTVLS-----------GRRSADTEISVRLVDIEEM 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN  YR    PTNVLSFP+          L  GDIV+   ++  EA    K  + H  
Sbjct: 50  TKLNQGYRDKSGPTNVLSFPSDLPPELDLPLL--GDIVICAPVVCDEAKSQQKILQAHWA 107

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H+ +HG LHLLGYDH+++ +A  ME LE  IL  L    PY+ +
Sbjct: 108 HMTVHGTLHLLGYDHIEEDEALAMEALETEILTSLNYPCPYQGE 151


>gi|213966837|ref|ZP_03394988.1| conserved hypothetical protein TIGR00043 [Pseudomonas syringae pv.
           tomato T1]
 gi|301381968|ref|ZP_07230386.1| putative metalloprotease [Pseudomonas syringae pv. tomato Max13]
 gi|302058772|ref|ZP_07250313.1| putative metalloprotease [Pseudomonas syringae pv. tomato K40]
 gi|302135148|ref|ZP_07261138.1| putative metalloprotease [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213928687|gb|EEB62231.1| conserved hypothetical protein TIGR00043 [Pseudomonas syringae pv.
           tomato T1]
 gi|330873561|gb|EGH07710.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 166

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E     DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVASETPA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|163739045|ref|ZP_02146458.1| hypothetical protein RGBS107_09406 [Phaeobacter gallaeciensis
           BS107]
 gi|161387850|gb|EDQ12206.1| hypothetical protein RGBS107_09406 [Phaeobacter gallaeciensis
           BS107]
          Length = 176

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 68/173 (39%), Positives = 90/173 (52%), Gaps = 18/173 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L I++E+  W D   L T         + +     + +  +  ELSL+  D  RI  L
Sbjct: 1   MTLDISIEDTRWQD-ADLTTHAVQAIHAVLGH-----FGLDADDCELSLLACDDARIMEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R   KPTNVLS+P                 +D    + LGDI +AYE    EA   
Sbjct: 55  NTEFRQKAKPTNVLSWPAEDLSSEEAGDEPLLPEADFTGEIPLGDIAIAYETCAREAEDA 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +HL HLI+HG LHLLGYDH+ D DA +ME LE  IL  +GI+DPY +D
Sbjct: 115 GKSLADHLRHLIVHGVLHLLGYDHIRDPDATLMERLEVQILGKMGIDDPYTLD 167


>gi|294637488|ref|ZP_06715774.1| putative metalloprotease [Edwardsiella tarda ATCC 23685]
 gi|291089320|gb|EFE21881.1| putative metalloprotease [Edwardsiella tarda ATCC 23685]
          Length = 157

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 15/162 (9%)

Query: 11  LDLQIAVENA-LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA ++A     E       E V  +              +  E+++   D      
Sbjct: 6   LDLQIACDDAPGLPAEGDFLRWLEAVLPR------------FRDEAEVTIRLVDEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D+PTNVLSFP  F +       +LGD+V+  +++E+EA        +H  H+
Sbjct: 54  LNLTYRGKDRPTNVLSFP--FEAPPEIELPLLGDMVICRQVVELEAQQQNITPLSHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH+ D++A  ME LE  I++ LG  DPY  +
Sbjct: 112 VVHGALHLLGYDHISDEEAEEMESLEADIMQALGYPDPYAAE 153


>gi|219870682|ref|YP_002475057.1| putative metalloprotease [Haemophilus parasuis SH0165]
 gi|254803906|sp|B8F457|RRMF_HAEPS RecName: Full=Probable rRNA maturation factor
 gi|219690886|gb|ACL32109.1| metalloprotease [Haemophilus parasuis SH0165]
          Length = 162

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 10/162 (6%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +DLQIA EN +        +   +   A        +         E+++   D      
Sbjct: 5   IDLQIASENTVGLPTAAQFQHWVDKALAM-------EAKTADYPETEITIRIVDEAESHE 57

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA    K  E H  HL
Sbjct: 58  LNLTYRGKDKPTNVLSFP--FEVPEGIQLPLLGDLIICRQVVEKEAVEQEKPLEAHWAHL 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            IHG LHLLGYDH+ D++A  ME LE  I++ LG +DPY  +
Sbjct: 116 AIHGTLHLLGYDHLTDEEAEEMESLETEIMQSLGFDDPYIAE 157


>gi|119775709|ref|YP_928449.1| putative metalloprotease [Shewanella amazonensis SB2B]
 gi|145572772|sp|A1S8S3|RRMF_SHEAM RecName: Full=Probable rRNA maturation factor
 gi|119768209|gb|ABM00780.1| protein of unknown function UPF0054 [Shewanella amazonensis SB2B]
          Length = 153

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 84/159 (52%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ AV       E    T   V     +            +  EL++   D+   + L
Sbjct: 7   LDLQFAVNPGNLPTEAEFETWVRVALGDTL------------DEAELTIRIVDATESQQL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG DKPTNVLSFP  F +  G    +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NRDYRGKDKPTNVLSFP--FEAPPGMELPLLGDLVICASVVENEALEQHKALEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH+DD +A  ME LE ++L  LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIDDAEAEEMEALETTLLTGLGYPDPYK 151


>gi|225025308|ref|ZP_03714500.1| hypothetical protein EIKCOROL_02206 [Eikenella corrodens ATCC
           23834]
 gi|224941926|gb|EEG23135.1| hypothetical protein EIKCOROL_02206 [Eikenella corrodens ATCC
           23834]
          Length = 175

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 10/145 (6%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E  F +     +   Y       E+ L+  D       N +YR  D  TNVLSF      
Sbjct: 33  EAQFRRWAWQAVKSQY----RRAEIGLLLLDEETARAYNRDYRQKDYATNVLSFALDEGE 88

Query: 93  SD------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                   G   ++ GD+V+  +++  EA   GK  E H  HL +HG LHL+G+DH++  
Sbjct: 89  QAALAGLSGSLPVLRGDLVICPQVVVREAAEQGKILEAHFAHLTLHGVLHLMGHDHIEPD 148

Query: 147 DACVMEGLERSILEDLGINDPYEVD 171
           +A  ME LE  ++  LG  +PY  D
Sbjct: 149 EAEAMEALEIRLMNQLGYPNPYAQD 173


>gi|167855765|ref|ZP_02478519.1| hypothetical protein HPS_06120 [Haemophilus parasuis 29755]
 gi|167853105|gb|EDS24365.1| hypothetical protein HPS_06120 [Haemophilus parasuis 29755]
          Length = 162

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 10/162 (6%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +DLQIA EN +        +   +   A        +         E+++   D      
Sbjct: 5   IDLQIASENTVGLPTAAQFQHWVDKALAM-------EAKTADYPETEITIRIVDEAESHE 57

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA    K  E H  HL
Sbjct: 58  LNLTYRGKDKPTNVLSFP--FEMPEGIELPLLGDLIICRQVVEKEAVEQEKPLEAHWAHL 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            IHG LHLLGYDH+ D++A  ME LE  I++ LG +DPY  +
Sbjct: 116 AIHGTLHLLGYDHLTDEEAEEMESLETEIMQSLGFDDPYIAE 157


>gi|187927509|ref|YP_001897996.1| unkown domain/putative metalloprotease fusion protein [Ralstonia
           pickettii 12J]
 gi|309779789|ref|ZP_07674544.1| hypothetical protein HMPREF1004_01138 [Ralstonia sp. 5_7_47FAA]
 gi|187724399|gb|ACD25564.1| protein of unknown function UPF0054 [Ralstonia pickettii 12J]
 gi|308921366|gb|EFP67008.1| hypothetical protein HMPREF1004_01138 [Ralstonia sp. 5_7_47FAA]
          Length = 270

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/165 (36%), Positives = 79/165 (47%), Gaps = 10/165 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
                L L + V+   +GDE+       +   + +   I+   F      +L++ F    
Sbjct: 115 AGAEMLTLDLTVQ---YGDELKAAARKALPKERDIEGWIAPALFAD---AQLNVRFVGEE 168

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YRG D  TNVL+F  A ++ D  S+    DIVL   ++E EA    K    H
Sbjct: 169 EGRTLNRTYRGKDYATNVLTFSYAESAEDPVSA----DIVLCCTVVEKEAKEQKKPLLAH 224

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             HLI+HG LH  GYDH D  DA  MEG+E  IL DLG  DPY  
Sbjct: 225 YAHLIVHGALHAQGYDHEDAADAKEMEGIETEILRDLGFADPYAD 269


>gi|218688476|ref|YP_002396688.1| putative metalloprotease [Escherichia coli ED1a]
 gi|254807366|sp|B7MPH5|RRMF_ECO81 RecName: Full=Probable rRNA maturation factor YbeY
 gi|218426040|emb|CAR06857.1| putative metal-dependent hydrolase [Escherichia coli ED1a]
          Length = 155

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F    G    +LGD+++  +++E EA   GK  E 
Sbjct: 49  AESHCLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLIICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME +E  I+  LG  DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEAIETEIMLALGYEDPYIAE 153


>gi|170719818|ref|YP_001747506.1| putative metalloprotease [Pseudomonas putida W619]
 gi|229890245|sp|B1J201|RRMF_PSEPW RecName: Full=Probable rRNA maturation factor
 gi|169757821|gb|ACA71137.1| protein of unknown function UPF0054 [Pseudomonas putida W619]
          Length = 157

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ A  +A   D+  LR  CE+   +  ++             E+++   D      
Sbjct: 3   ELDLQRAT-DAATPDDAALRAWCELALRQRSAD------------SEMTIRLVDEAEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSFP A    +     +LGD+V+   ++E EA   GK  + H  HL
Sbjct: 50  LNHTYRHKDYATNVLSFP-ADVPDELLDIPLLGDLVICVPVVEREAAEQGKSLQAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D +A  ME LER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIEDDEAEEMEALERELLAELGHPDPYADD 150


>gi|163741714|ref|ZP_02149104.1| hypothetical protein RG210_04075 [Phaeobacter gallaeciensis 2.10]
 gi|161384887|gb|EDQ09266.1| hypothetical protein RG210_04075 [Phaeobacter gallaeciensis 2.10]
          Length = 176

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 68/173 (39%), Positives = 90/173 (52%), Gaps = 18/173 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L I++E+  W D   L T         + +     + +  +  ELSL+  D  RI  L
Sbjct: 1   MTLDISIEDTRWQD-ADLTTHAVQAIHAVLGH-----FGLDADDCELSLLACDDARIMEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R   KPTNVLS+P                 +D    + LGDI +AYE    EA   
Sbjct: 55  NTEFRQKAKPTNVLSWPVEDLSSEEAGDEPLLPEADFTGEIPLGDIAIAYETCAREAEDA 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           GK   +HL HLI+HG LHLLGYDH+ D DA +ME LE  IL  +GI+DPY +D
Sbjct: 115 GKSLADHLRHLIVHGVLHLLGYDHIRDPDATLMERLEVQILGKMGIDDPYTLD 167


>gi|330818259|ref|YP_004361964.1| hypothetical protein bgla_1g34050 [Burkholderia gladioli BSR3]
 gi|327370652|gb|AEA62008.1| hypothetical protein bgla_1g34050 [Burkholderia gladioli BSR3]
          Length = 269

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 55/165 (33%), Positives = 77/165 (46%), Gaps = 13/165 (7%)

Query: 5   KVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
               P L+L +      +GDEI      ++   K ++  +S   F   +  +L++ F   
Sbjct: 116 PAGEPELELVV-----QYGDEIAASQRKKLPKPKLIAEWLSTALF---SDAQLTVRFVGE 167

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YR  D PTNVL+F    A         +GD+VL   ++E EA    K    
Sbjct: 168 KEGRELNGGYRKKDYPTNVLTFAYDQAP----DGTTIGDLVLCCPVVEKEAGEQDKTLVA 223

Query: 125 HLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPY 168
           H  HL++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY
Sbjct: 224 HYAHLLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPY 268


>gi|238920800|ref|YP_002934315.1| hypothetical protein NT01EI_2926 [Edwardsiella ictaluri 93-146]
 gi|259646922|sp|C5BGB7|RRMF_EDWI9 RecName: Full=Probable rRNA maturation factor
 gi|238870369|gb|ACR70080.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 157

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 15/162 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A  +      E       E V  +              +  E+++   D      
Sbjct: 6   LDLQLACADLQGLPAEGDFLRWLEAVLPR------------FRDEAEVTIRLVDEAESHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D+PTNVLSFP  F +  G    +LGD+V+  +++E EA        +H  H+
Sbjct: 54  LNLTYRGKDRPTNVLSFP--FEAPPGIELPLLGDMVICRQVVEREAQEQNISQLSHWAHM 111

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH+ D++A  ME LE  I++ LG  DPY  +
Sbjct: 112 VVHGSLHLLGYDHISDEEAEEMESLEAEIMQVLGYPDPYAAE 153


>gi|78484820|ref|YP_390745.1| hypothetical protein Tcr_0475 [Thiomicrospira crunogena XCL-2]
 gi|123555910|sp|Q31IF2|RRMF_THICR RecName: Full=Probable rRNA maturation factor
 gi|78363106|gb|ABB41071.1| Conserved hypothetical protein; UPF0054 [Thiomicrospira crunogena
           XCL-2]
          Length = 160

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/164 (40%), Positives = 85/164 (51%), Gaps = 10/164 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD Q+A E     DE  L T  + +  K V   +       E   EL++   D   I+TL
Sbjct: 4   LDYQVAAEE---VDEAELPTYEQCL--KWVEVALLDDRLDGE--TELTIRIVDEDEIQTL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFAS---SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           N +YRG D+ TNVLSFP          G     +GD+V+  +++  EA    K  E H  
Sbjct: 57  NRDYRGKDQTTNVLSFPFENPPVLVDLGEELPYIGDLVICAQVVAQEAKAQHKPLEAHWA 116

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H++IHG LHL G DHVDD +A  ME LE  IL DLG + PYE D
Sbjct: 117 HMVIHGCLHLQGMDHVDDDEAIKMEALEAEILADLGYDSPYESD 160


>gi|146310843|ref|YP_001175917.1| putative metalloprotease [Enterobacter sp. 638]
 gi|166977725|sp|A4W836|RRMF_ENT38 RecName: Full=Probable rRNA maturation factor
 gi|145317719|gb|ABP59866.1| protein of unknown function UPF0054 [Enterobacter sp. 638]
          Length = 155

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 62/166 (37%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++   LDLQ+A E+     E       E  F K +  +I +     +   E+++   D  
Sbjct: 1   MSQVILDLQLACEDNSGLPE-------ESQFQKWLDAVIPQ----FQEESEVTIRVVDEA 49

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  + H
Sbjct: 50  ESHELNLTYRGKDKPTNVLSFP--FEAPPGIELPLLGDLIICRQVVEQEAKEQQKPLDAH 107

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H++IHG LHLLGYDH++D++A  ME LE  I+  LG  DPY  +
Sbjct: 108 WAHMVIHGSLHLLGYDHIEDEEAEEMESLETEIMLALGYEDPYIAE 153


>gi|254486624|ref|ZP_05099829.1| conserved hypothetical protein TIGR00043 [Roseobacter sp. GAI101]
 gi|214043493|gb|EEB84131.1| conserved hypothetical protein TIGR00043 [Roseobacter sp. GAI101]
          Length = 171

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/171 (38%), Positives = 90/171 (52%), Gaps = 18/171 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L I  E+  W   + L TL E      + +L      +  ++ E++++  D  RI  LN 
Sbjct: 4   LDIVEEDPRWA-ALDLETLAESALITTLKHL-----NLDPDVSEITILACDDARIADLNA 57

Query: 73  EYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           ++RG   PTNVLS+P                ++D    L LGDI ++Y+    EA   GK
Sbjct: 58  DFRGKPTPTNVLSWPADERGAAQDGGLPLTVTADFDGMLELGDIAISYDTCAKEARAAGK 117

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +H+ HLIIHG LHLLGYDH  D DA +MEG+E  IL  LG++DPY  D
Sbjct: 118 SMTDHVTHLIIHGTLHLLGYDHDRDADATLMEGIEVEILGKLGLDDPYRED 168


>gi|317128316|ref|YP_004094598.1| hypothetical protein Bcell_1604 [Bacillus cellulosilyticus DSM
           2522]
 gi|315473264|gb|ADU29867.1| protein of unknown function UPF0054 [Bacillus cellulosilyticus DSM
           2522]
          Length = 156

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS----SLMLGDIVLAY 108
              E+S+ F +  +I+ LN EYR  D+PT+VLSF          +      +LGDI+++ 
Sbjct: 39  KDAEVSITFVEDDKIQELNREYRDKDQPTDVLSFALNEGDQQPITGEGLPELLGDIIISV 98

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              + +A   G  F   L  L +HGFLHLLGYDH  +++   M   +  ILE  G+ 
Sbjct: 99  PRAKQQAEEYGHGFNRELCFLAVHGFLHLLGYDHNTEEEEREMFKKQEEILEKYGLK 155


>gi|90420540|ref|ZP_01228447.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335268|gb|EAS49021.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 203

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 6/163 (3%)

Query: 11  LDLQIAVENALWGDEI--HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           L + + VE+  W D     +  +    F+ A + L   G  V     E+SL   D   + 
Sbjct: 18  LTVALTVEDPRWDDAGLGDIPAMAAETFSVAAARLGLPGDLVS----EISLTLADDETVR 73

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+R  DKPTN+LSFP A  +       +LGD+++A+E +  EA+   K F +H  H
Sbjct: 74  AVNAEWRNKDKPTNILSFPMADLAPGERPGPLLGDLLVAFETVAREADEEAKAFADHFRH 133

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           L++HGFLHL+G DH+ D +A  ME  E +IL + GI DPY  +
Sbjct: 134 LLVHGFLHLMGLDHMVDTEADDMEAAEIAILAEFGIADPYGDE 176


>gi|17545248|ref|NP_518650.1| metalloprotease [Ralstonia solanacearum GMI1000]
 gi|17427539|emb|CAD14057.1| hypothetical protein RSc0529 [Ralstonia solanacearum GMI1000]
          Length = 255

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 58/161 (36%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L L + V++   GD +       +   K +   I+   F      +L++ F D     T
Sbjct: 104 MLTLDLTVQH---GDALKAAARKALPKQKDIEAWIAPALFAD---AQLNVRFVDEEEGRT 157

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D  TNVL+F  A    D  ++    DIVL   ++E EA   GK    H  HL
Sbjct: 158 LNHTYRGKDYATNVLTFSYAETEDDPVAA----DIVLCCPVVEQEAKDQGKPLRAHYAHL 213

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           I+HG LH  GYDH D   A  MEG+E  +L  LG  DPY  
Sbjct: 214 IVHGALHAQGYDHEDPAQAEEMEGIETEVLAGLGFPDPYAD 254


>gi|77163774|ref|YP_342299.1| hypothetical protein Noc_0239 [Nitrosococcus oceani ATCC 19707]
 gi|123595149|sp|Q3JEH7|RRMF_NITOC RecName: Full=Probable rRNA maturation factor
 gi|76882088|gb|ABA56769.1| Protein of unknown function UPF0054 [Nitrosococcus oceani ATCC
           19707]
          Length = 153

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 46/138 (33%), Positives = 67/138 (48%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
             V         +      +    E+++          LN+ YR  +  TN+LSFP    
Sbjct: 14  ASVPLQADFLRWVKAALVNQSKAGEITIRVASESEAAQLNWRYRHKEGATNILSFPFEVP 73

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           S       +LGD+V+   ++  EA    K+ + H  HL++HG LHLLG+DH  + +A  M
Sbjct: 74  SCVSLDVPLLGDLVICAPVVAREALEQTKKEQAHWAHLVVHGVLHLLGFDHQQEVEAQQM 133

Query: 152 EGLERSILEDLGINDPYE 169
           E LE +ILE LG  DPYE
Sbjct: 134 ESLEVTILESLGYPDPYE 151


>gi|161523783|ref|YP_001578795.1| fused unkown domain/putative metalloprotease [Burkholderia
           multivorans ATCC 17616]
 gi|221200107|ref|ZP_03573150.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 gi|221206740|ref|ZP_03579752.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221211287|ref|ZP_03584266.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|160341212|gb|ABX14298.1| protein of unknown function UPF0054 [Burkholderia multivorans ATCC
           17616]
 gi|221168648|gb|EEE01116.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221173395|gb|EEE05830.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221180346|gb|EEE12750.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 237

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 11/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
             +L ++V+   +GDEI       +   K ++  +    F      ++++ F       T
Sbjct: 87  EQELDLSVQ---YGDEITSEVRKTLPKRKLIAEWLEPALFA---NAQITVRFVGETEGRT 140

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D PTNVL+F             ++GD+VL   ++E EA    K    H  HL
Sbjct: 141 LNAGYRHKDYPTNVLTFAY----DPAPDGTVIGDLVLCCPVVEKEAREQDKPLAAHYAHL 196

Query: 130 IIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY 
Sbjct: 197 LVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYR 237


>gi|238755073|ref|ZP_04616421.1| metalloprotease [Yersinia ruckeri ATCC 29473]
 gi|238706777|gb|EEP99146.1| metalloprotease [Yersinia ruckeri ATCC 29473]
          Length = 127

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
             +   E+++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +
Sbjct: 4   QFQEESEVTIRVVDEAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQ 61

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++E EA    K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 62  VVEQEAVEQNKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQGLGYPDPY 120


>gi|329897208|ref|ZP_08271948.1| heat shock protein involved in translation [gamma proteobacterium
           IMCC3088]
 gi|328921363|gb|EGG28757.1| heat shock protein involved in translation [gamma proteobacterium
           IMCC3088]
          Length = 157

 Score =  167 bits (423), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 59/158 (37%), Positives = 83/158 (52%), Gaps = 11/158 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ + V+ A  GD        +  F + VS  +            + L   DS+ I+ L
Sbjct: 1   MNISVCVDRACGGDSPD-----DDSFRRWVSAALKACRKSGH----VDLKIVDSNEIQYL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG D  TNVLSFP+      G  S +LGD+ L   +IE EA+   K   +H  HL 
Sbjct: 52  NKTYRGKDAATNVLSFPSELPP--GIPSDLLGDLALCTPVIEREASEQRKVLMHHWAHLT 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHL+G+DH++D DA +ME LE  IL  L + +PY
Sbjct: 110 IHGTLHLIGFDHIEDTDAEIMESLEIDILASLSLPNPY 147


>gi|254435169|ref|ZP_05048676.1| conserved hypothetical protein TIGR00043 [Nitrosococcus oceani
           AFC27]
 gi|207088280|gb|EDZ65552.1| conserved hypothetical protein TIGR00043 [Nitrosococcus oceani
           AFC27]
          Length = 143

 Score =  167 bits (423), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 46/138 (33%), Positives = 67/138 (48%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
             V         +      +    E+++          LN+ YR  +  TN+LSFP    
Sbjct: 4   ASVPLQADFLRWVKAALVNQSKAGEITIRVASESEAAQLNWRYRHKEGATNILSFPFEVP 63

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           S       +LGD+V+   ++  EA    K+ + H  HL++HG LHLLG+DH  + +A  M
Sbjct: 64  SCVSLDVPLLGDLVICAPVVAREALEQTKKEQAHWAHLVVHGVLHLLGFDHQQEVEAQQM 123

Query: 152 EGLERSILEDLGINDPYE 169
           E LE +ILE LG  DPYE
Sbjct: 124 ESLEVTILESLGYPDPYE 141


>gi|56460051|ref|YP_155332.1| metal-dependent hydrolase [Idiomarina loihiensis L2TR]
 gi|59799006|sp|Q5QYC3|RRMF_IDILO RecName: Full=Probable rRNA maturation factor
 gi|56179061|gb|AAV81783.1| Predicted metal-dependent hydrolase [Idiomarina loihiensis L2TR]
          Length = 163

 Score =  167 bits (423), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 3/138 (2%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E      V+  +       +  VEL++        + LN E+R  D  TNVLSFP  F S
Sbjct: 20  ENAVHSWVAATLDY-LQENDKAVELTVRIAALEEAQQLNNEFRNKDYATNVLSFP--FNS 76

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGD+V+   ++E EA    K   +H  H++IHG LHLLGYDH++D +A  ME
Sbjct: 77  PVELPVTLLGDLVICQSVVEREAEEQQKSAIDHWTHMVIHGTLHLLGYDHIEDDEAEEME 136

Query: 153 GLERSILEDLGINDPYEV 170
            +ER+IL  LGI+DPY+ 
Sbjct: 137 QIERNILASLGISDPYQT 154


>gi|154254050|ref|YP_001414874.1| hypothetical protein Plav_3619 [Parvibaculum lavamentivorans DS-1]
 gi|171769693|sp|A7HZ84|RRMF_PARL1 RecName: Full=Probable rRNA maturation factor
 gi|154158000|gb|ABS65217.1| protein of unknown function UPF0054 [Parvibaculum lavamentivorans
           DS-1]
          Length = 185

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 67/168 (39%), Positives = 86/168 (51%), Gaps = 15/168 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++++  E   W               +A  +  +      +   EL +V  D   +  L
Sbjct: 22  LEIEVLREAGDWESSTD------ETVRRAAEHAYAVAR--GDESAELCIVLGDDALVAKL 73

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSS-------LMLGDIVLAYEIIEIEANVLGKEFE 123
           N  YRG + PTNVLSFP A     G           +LGD+VLA E I  EA    K+F 
Sbjct: 74  NKAYRGKEGPTNVLSFPAAEMPDTGAPEAVFGGATPLLGDVVLARETIAREALDQNKKFA 133

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +HL HL +HG LHLLG+DH++D DA  ME LER ILEDLGI DPY  D
Sbjct: 134 DHLSHLTVHGVLHLLGHDHMEDVDADEMEALERDILEDLGIADPYGAD 181


>gi|331014757|gb|EGH94813.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 166

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E     DE   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVASETPA-PDEALFRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|259415656|ref|ZP_05739577.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
 gi|259348886|gb|EEW60648.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
          Length = 170

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/173 (38%), Positives = 90/173 (52%), Gaps = 18/173 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L + +E+A W D   L    EV  A  ++ L      + +   E++++  D  RI  L
Sbjct: 1   MILDVVIEDARW-DAAALNKQAEVAVAATLAYL-----ELLDEDWEVTVLGCDDARIADL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R   KPTNVLS+P                  D      LGDI ++YE    EA + 
Sbjct: 55  NAEFREKPKPTNVLSWPAQELAAAQEGGQPAPPEVDFMGDAALGDIAISYETCMKEAEIA 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            K  E+H+ HL++HG LHLLGYDH+ D DA VME LE  IL  LGI DPY ++
Sbjct: 115 QKPPEDHIRHLLVHGTLHLLGYDHIRDGDATVMETLEVGILGKLGIPDPYIIE 167


>gi|119504407|ref|ZP_01626487.1| Predicted metal-dependent hydrolase [marine gamma proteobacterium
           HTCC2080]
 gi|119459915|gb|EAW41010.1| Predicted metal-dependent hydrolase [marine gamma proteobacterium
           HTCC2080]
          Length = 163

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 2/141 (1%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           +    +  F + V+   S          ELS+  +++  +  LN  +R    PTNVLSFP
Sbjct: 13  IEAPEDESFKRWVNATCSMLGADPTAQPELSIRISNTDEMTQLNQRFRNRSGPTNVLSFP 72

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
              ++   C   +LGDIV+   ++  EA   GK    H  HL +HG LHLLGYDH  D  
Sbjct: 73  ADISAEIPCE--LLGDIVICSPLVWKEAQEQGKPPICHWAHLTVHGVLHLLGYDHETDDA 130

Query: 148 ACVMEGLERSILEDLGINDPY 168
           A  ME LE  IL+  G +DPY
Sbjct: 131 AQNMEALETQILQQFGCSDPY 151


>gi|217969296|ref|YP_002354530.1| unkown domain/ metalloprotease fusion protein [Thauera sp. MZ1T]
 gi|217506623|gb|ACK53634.1| protein of unknown function UPF0054 [Thauera sp. MZ1T]
          Length = 274

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 6/121 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS------LMLGDIVLAYE 109
           ++++          LN +YRG D  TNVL+F  A                + GD+VL   
Sbjct: 152 QVTVRLVGEAEGRALNRDYRGKDYATNVLTFAYAEGEDLPGLPAAAADVPLAGDLVLCVP 211

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++  EA   GK  E H  HL++HG LHL GYDH ++ +A  ME LE +IL +LG  DPY 
Sbjct: 212 VVVREAAAQGKTLEAHFAHLVVHGMLHLQGYDHENETEAAEMEALETAILRELGYADPYA 271

Query: 170 V 170
           +
Sbjct: 272 L 272


>gi|90421994|ref|YP_530364.1| hypothetical protein RPC_0470 [Rhodopseudomonas palustris BisB18]
 gi|122477512|sp|Q21C41|RRMF_RHOPB RecName: Full=Probable rRNA maturation factor
 gi|90104008|gb|ABD86045.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           BisB18]
          Length = 168

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 66/157 (42%), Positives = 87/157 (55%), Gaps = 3/157 (1%)

Query: 16  AVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           A E  +  D        E +  +A+    +       +  EL+++ TD   ++TLN  +R
Sbjct: 8   ATEVLIVADCWQAEAEAEAIVLRAIEAAAAMTDADTADA-ELAVMLTDDAGVQTLNANWR 66

Query: 76  GIDKPTNVLSFPTAFASSDGCS--SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           GIDKPTNVLSFP      D       MLGDI +AY+    EA+  GK F++HL HL +HG
Sbjct: 67  GIDKPTNVLSFPALQPEGDAPDDAPKMLGDIAIAYQTTRREADDEGKPFDHHLSHLAVHG 126

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           FLHL+GYDH  D +A  ME LER IL  LG+ DPY  
Sbjct: 127 FLHLVGYDHEKDAEAEAMESLEREILAQLGVPDPYAD 163


>gi|83746118|ref|ZP_00943173.1| Hypothetical Metal-Binding Protein [Ralstonia solanacearum UW551]
 gi|207742382|ref|YP_002258774.1| hypothetical protein RSIPO_00569 [Ralstonia solanacearum IPO1609]
 gi|83727301|gb|EAP74424.1| Hypothetical Metal-Binding Protein [Ralstonia solanacearum UW551]
 gi|206593772|emb|CAQ60699.1| hypothetical protein RSIPO_00569 [Ralstonia solanacearum IPO1609]
          Length = 254

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
            +   L L + V++   GD +           K +   I+   F      +L++ F D  
Sbjct: 99  ADAEMLTLDLTVQH---GDALKAAARKACPKQKDIEAWIAPALFAD---AQLNVRFVDEE 152

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YRG D  TNVL+F  A    D  S+    D+VL   ++E EA    K    H
Sbjct: 153 EGRTLNRTYRGKDYATNVLTFSYAETEHDPVSA----DVVLCCPVVEKEAKDQDKPLRAH 208

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             HLI+HG LH  GYDH +  +A  MEG+E ++L +LG  DPY  
Sbjct: 209 YAHLIVHGALHAQGYDHENPAEAKEMEGIETAVLAELGFPDPYAD 253


>gi|145558836|sp|Q39D49|RRMF_BURS3 RecName: Full=Probable rRNA maturation factor
          Length = 172

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 5   KVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
            +  P LDL +      +GDEI       +   K ++  I    F      +L++ F   
Sbjct: 19  ALREPELDLSV-----QYGDEITSDVRKTLPKRKLIAEWIEPALFA---SAQLTVRFVGE 70

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               TLN  YR  D PTNVL+F    A        ++GD+VL   ++E EA+  GK    
Sbjct: 71  EEGRTLNAGYRHKDYPTNVLTFAYDAAP----DGTVIGDLVLCCPVVEKEAHEQGKPLTA 126

Query: 125 HLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           H  HL++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 127 HYAHLLVHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 172


>gi|330987618|gb|EGH85721.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 166

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E +   D+   R  CE+   +  ++             EL++   D +    
Sbjct: 3   ELDLQIASETSA-PDKARFRLWCEMGLRQRSAD------------SELTIRLVDENEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG   PY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPAPYAED 150


>gi|77461173|ref|YP_350680.1| putative metalloprotease [Pseudomonas fluorescens Pf0-1]
 gi|123603159|sp|Q3K6B5|RRMF_PSEPF RecName: Full=Probable rRNA maturation factor
 gi|77385176|gb|ABA76689.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 164

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 84/162 (51%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E      E   R  CE+   +  ++             E+++   D      
Sbjct: 3   ELDLQIATEAPA-PTEAEFRQWCELALRQRTAD------------SEMTIRLVDEDEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP      +     +LGD+V+   ++E EA   GKE + H  HL
Sbjct: 50  LNHTWRHKDYATNVLSFPAE-VPDEFLDIPLLGDLVICVAVVEREATEQGKELKAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEALERELLAELGYPDPYADD 150


>gi|146284075|ref|YP_001174228.1| putative metalloprotease [Pseudomonas stutzeri A1501]
 gi|166232639|sp|A4VQY5|RRMF_PSEU5 RecName: Full=Probable rRNA maturation factor
 gi|145572280|gb|ABP81386.1| predicted metal-dependent hydrolase [Pseudomonas stutzeri A1501]
 gi|327482392|gb|AEA85702.1| putative metalloprotease [Pseudomonas stutzeri DSM 4166]
          Length = 160

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 80/162 (49%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ A           L+  CE+   +            +    EL++   D      
Sbjct: 3   ELDLQCAS-TGAAPAAADLQRWCELALRQ------------RSGDSELTIRLVDEEEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP A    +     +LGD+V+   ++E EA   GK  + H  HL
Sbjct: 50  LNRTWRQKDYATNVLSFP-ADVPDEFLDIPLLGDLVICVPVVEREAAEQGKTLDAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D +A  ME LER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIEDAEAEEMEALERQLLAELGHPDPYAED 150


>gi|86136019|ref|ZP_01054598.1| hypothetical protein MED193_17889 [Roseobacter sp. MED193]
 gi|85826893|gb|EAQ47089.1| hypothetical protein MED193_17889 [Roseobacter sp. MED193]
          Length = 170

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/173 (38%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L+I +E++ W  E  L  L       A+ +     + +     E++L+  D  +I  L
Sbjct: 1   MALEITIEDSRW-QEAGLEALAHQAVGAALGH-----FGLDPEDCEIALLACDDDQIAGL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R    PTNVLS+P                 +D    + LGDI +AY+    EA+  
Sbjct: 55  NAEFREKPVPTNVLSWPAEDLAASEPGGQPAVPEADFTGEIPLGDIAIAYDTCLREADAA 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            K   +HL HLI+HG LHLLGYDH+ D DA VMEGLE  IL +LG++DPY VD
Sbjct: 115 NKPLADHLRHLIVHGVLHLLGYDHISDLDATVMEGLEVEILGNLGLDDPYTVD 167


>gi|254516560|ref|ZP_05128619.1| putative metalloprotease H16_A0526 [gamma proteobacterium NOR5-3]
 gi|219674983|gb|EED31350.1| putative metalloprotease H16_A0526 [gamma proteobacterium NOR5-3]
          Length = 163

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 2/147 (1%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E   ++  +    +A    + +    +    E +L   D+  ++ LN +YRG D+PTNVL
Sbjct: 9   ETLEKSPDDQTLLRAAECALLQSNANRHKHWEAALRIVDAKEMQQLNAQYRGKDRPTNVL 68

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SFP    +    +  +LGDIV+   +++ EA   GK    H  H++IHG LHLLG+DH  
Sbjct: 69  SFPADLPAD--VTLDLLGDIVICAPVVQEEAATQGKPLAAHWDHMLIHGVLHLLGFDHES 126

Query: 145 DKDACVMEGLERSILEDLGINDPYEVD 171
           D +A  ME LE   L  LG   PY+ D
Sbjct: 127 DAEATHMELLETQALATLGWPCPYQAD 153


>gi|94676735|ref|YP_588542.1| hypothetical protein BCI_0064 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|145572748|sp|Q1LU22|RRMF_BAUCH RecName: Full=Probable rRNA maturation factor
 gi|94219885|gb|ABF14044.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 155

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 13/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ+A ++        L               +     +     E+++   D      L
Sbjct: 6   LDLQVACDHRCNLPSEDL-----------FMYWLYMVLPLFRKKAEVTIRLVDEAESYNL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG +  TNVLSFP  F +      ++LGDI++  +++E EA    K  E +  H++
Sbjct: 55  NKIYRGQNHSTNVLSFP--FKAPSPVKLVLLGDIIICRQVVEREAQEQNKILEAYWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH  +++A  ME LE  I+  LG  +PYE +
Sbjct: 113 IHGSLHLLGYDHFIEQNAKKMEYLETKIMHKLGYLNPYETE 153


>gi|117622868|ref|YP_851781.1| putative metalloprotease [Escherichia coli APEC O1]
 gi|145558845|sp|A1A8S7|RRMF_ECOK1 RecName: Full=Probable rRNA maturation factor YbeY
 gi|115511992|gb|ABJ00067.1| putative metal-dependent hydrolase [Escherichia coli APEC O1]
          Length = 155

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 6   VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1   MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQEESEVTIRVVDT 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 49  AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  L   DPY  +
Sbjct: 107 HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALDYEDPYIAE 153


>gi|294670470|ref|ZP_06735350.1| hypothetical protein NEIELOOT_02187 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307749|gb|EFE48992.1| hypothetical protein NEIELOOT_02187 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 172

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 3/138 (2%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS---S 93
            +       +         ++SL+  D       N +YRG D  TNVLSF         +
Sbjct: 33  ERDFYRWAWQAVKQHHRHADISLLLLDEEPARACNRDYRGKDYATNVLSFALDEGETMYA 92

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
              S  + GD+V+  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A  ME 
Sbjct: 93  PALSDGLHGDLVICPQVVFKEAAEQGKTPEQHFAHLTIHGVLHLMGYDHIEDTEAEEMEA 152

Query: 154 LERSILEDLGINDPYEVD 171
           LE  +L  L   DPY  D
Sbjct: 153 LETRLLNQLAYPDPYSQD 170


>gi|207727982|ref|YP_002256376.1| hypothetical protein RSMK04405 [Ralstonia solanacearum MolK2]
 gi|206591225|emb|CAQ56837.1| hypothetical protein RSMK04405 [Ralstonia solanacearum MolK2]
          Length = 254

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
            +   L L + V++   GD +           K +   I+   F      +L++ F D  
Sbjct: 99  ADAEMLTLDLTVQH---GDALKAAARKACPKQKDIEAWIAPALFAD---AQLNVRFVDEE 152

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YRG D  TNVL+F  A    D  S+    D+VL   ++E EA    K    H
Sbjct: 153 EGRTLNRTYRGKDYATNVLTFSYAETEHDPVSA----DVVLCCPVVEKEAKDQDKPLRAH 208

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             HLI+HG LH  GYDH +  +A  MEG+E ++L +LG  DPY  
Sbjct: 209 YAHLIVHGALHAQGYDHENPAEAKEMEGIETAVLAELGFPDPYAD 253


>gi|257092863|ref|YP_003166504.1| hypothetical protein CAP2UW1_1247 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045387|gb|ACV34575.1| protein of unknown function UPF0054 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 144

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 18/160 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +Q A        +  +RT                     +   ++++ F D+     LN 
Sbjct: 1   MQYACLANELPQKPQVRTWARAAID-----------VDGKRRGQITVRFVDADEARRLNR 49

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +YR  D  TNVLSFP A         ++ GD+VL   ++  EA   GK  E H  HLI+H
Sbjct: 50  DYRHRDYATNVLSFPYAR------EPVVCGDLVLCAPVVAREAAEQGKPLEAHYAHLIVH 103

Query: 133 GFLHLLGYDHVDDK-DACVMEGLERSILEDLGINDPYEVD 171
           G LHL GYDH      A  ME  ER +L  LG  DPY ++
Sbjct: 104 GLLHLQGYDHETSARQAAEMESRERRVLHALGYPDPYAME 143


>gi|319779780|ref|YP_004139256.1| hypothetical protein Mesci_0031 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165668|gb|ADV09206.1| protein of unknown function UPF0054 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 166

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/163 (46%), Positives = 93/163 (57%), Gaps = 7/163 (4%)

Query: 7   NLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           N+P +D+ IAVE   W DE  L  L +     A +     G        ELSLVF+D   
Sbjct: 11  NIP-VDIDIAVEAGNWPDEASLTRLVDRAVKAAFAETGVAGR------SELSLVFSDDAH 63

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ LN  +RG DKPTNVLSFP    +  G    MLGDIVLA E +  EA +  K  ENH+
Sbjct: 64  IQVLNAGWRGKDKPTNVLSFPAFPFAQGGPLPPMLGDIVLAAETVAHEAVLEDKPVENHI 123

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL+IHG LHLLGYDH  + +A  ME +ER+ L  L I DPY 
Sbjct: 124 THLVIHGLLHLLGYDHETEAEAEAMEAVERAALARLAIPDPYA 166


>gi|304310520|ref|YP_003810118.1| Protein of unknown function UPF0054 [gamma proteobacterium HdN1]
 gi|301796253|emb|CBL44461.1| Protein of unknown function UPF0054 [gamma proteobacterium HdN1]
          Length = 166

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 79/160 (49%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALW--GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           LD  +  E+ +     E       +  F  AV+              EL+L         
Sbjct: 4   LDFVLQNEDEIEGVPSEADCLRWAQAAFD-AVTQKSPLNPADNPIPWELTLRVVLPTESR 62

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYRG D PTNVLSFP  F +  G S  +LGD+ +  EI+E EA   GK    H  H
Sbjct: 63  ELNREYRGKDAPTNVLSFP--FEAPPGISIPILGDLAICAEIVEQEAREQGKASNAHWAH 120

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++IHG LHLLG+DH+ D +A  ME LE S+L    I DPY
Sbjct: 121 MVIHGTLHLLGFDHIHDDEADAMEALEISLLAGFDITDPY 160


>gi|237798428|ref|ZP_04586889.1| metal-binding heat shock protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021280|gb|EGI01337.1| metal-binding heat shock protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 166

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E +    E   R  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVASETSA-PSEAQFRLWCEMGLRQRSAD------------SELTVRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKDYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSIDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHLDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|300705109|ref|YP_003746712.1| metalloprotease [Ralstonia solanacearum CFBP2957]
 gi|299072773|emb|CBJ44128.1| Putative metalloprotease [Ralstonia solanacearum CFBP2957]
          Length = 254

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 10/163 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
            +   L L + V++   GD +           K +   I+   F      +L++ F D  
Sbjct: 99  ADAEMLTLDLTVQH---GDALKGAARKACPKQKDIEAWIAPALFAD---AQLNVRFVDEE 152

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
              TLN  YRG D  TNVL+F  A    D  S+    D+VL   ++E EA   GK    H
Sbjct: 153 EGRTLNRTYRGKDYATNVLTFSYAETEHDPVSA----DVVLCCPVVEKEAKDQGKPLRAH 208

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HLI+HG LH  GYDH +  +A  MEG+E ++L +LG  DPY
Sbjct: 209 YAHLIVHGALHAQGYDHENPAEAKEMEGIETAVLTELGFPDPY 251


>gi|226951970|ref|ZP_03822434.1| metalloprotease [Acinetobacter sp. ATCC 27244]
 gi|226837308|gb|EEH69691.1| metalloprotease [Acinetobacter sp. ATCC 27244]
          Length = 161

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 8/164 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +    F  +   E+ +   D      L
Sbjct: 1   MKINLSLQQDFQTAELPLK---RGQIKKHIETALRHVGF--DADCEIGIACVDLAESHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG--CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +  LGD+V+   ++  EA    K   +H  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEKMLSLLDAEPLGDLVICMPVVLQEAKEQQKTPMDHFTH 115

Query: 129 LIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGINDPYEVD 171
           L++HG LHLLGYDH   + DA  ME LE +IL+ L I +PY+ D
Sbjct: 116 LLVHGILHLLGYDHETSESDAEEMEALEIAILKKLNIANPYQAD 159


>gi|299067910|emb|CBJ39124.1| Putative metalloprotease [Ralstonia solanacearum CMR15]
          Length = 255

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 76/160 (47%), Gaps = 10/160 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L L + V++   GD +       +   K +   I+   F      +L++ F D     T
Sbjct: 104 MLTLDLTVQH---GDALKAAARKALPKHKDIEAWIAPALFAD---AQLNVRFVDEEEGRT 157

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D  TNVL+F  A    D  ++    DIVL   ++E EA   GK    H  HL
Sbjct: 158 LNHTYRGKDYATNVLTFSYAETEDDPVAA----DIVLCCPVVEKEAKDQGKPLRAHYAHL 213

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           I+HG LH  GYDH D   A  MEG+E  +L  LG  DPY 
Sbjct: 214 IVHGALHAQGYDHEDPAQAEEMEGIETEVLAGLGFPDPYA 253


>gi|212638691|ref|YP_002315211.1| putative metal-dependent hydrolase [Anoxybacillus flavithermus WK1]
 gi|212560171|gb|ACJ33226.1| Predicted metal-dependent hydrolase [Anoxybacillus flavithermus
           WK1]
          Length = 194

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE +  T  ++   + +    +K   V  +  E+S+ F D+ +I  +N +YRG D+PT+V
Sbjct: 47  DETNEMTEEQMNLIEQLLQHAAKEEHV-PDEAEVSVTFVDNEKIREINRDYRGKDQPTDV 105

Query: 84  LSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           +SF       +  +        +LGDI+++      +A   G  F   L  L +HGFLHL
Sbjct: 106 ISFALEEMGEEEIAIVGADVPPVLGDIIISVPKAREQAEQYGHSFMRELGFLAVHGFLHL 165

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH  +++  VM   +  +L+  G+ 
Sbjct: 166 LGYDHETEEEEKVMFAKQEQLLQQFGLT 193


>gi|307252587|ref|ZP_07534481.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306859909|gb|EFM91928.1| metalloprotease [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 159

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 8/159 (5%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +DLQIA EN+      +L +L ++      + L  +         E+++   D      
Sbjct: 1   MIDLQIACENSE-----NLPSLEQLTLWVQ-TALAYEAQTEDFPETEMTIRIVDEAESHE 54

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H  HL
Sbjct: 55  LNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESHWAHL 112

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            IHG LHLLGYDH++D++A  MEGLE  I++ LG  DPY
Sbjct: 113 AIHGTLHLLGYDHIEDEEAEEMEGLETEIMQKLGFADPY 151


>gi|149907592|ref|ZP_01896339.1| hypothetical protein PE36_06882 [Moritella sp. PE36]
 gi|149809262|gb|EDM69191.1| hypothetical protein PE36_06882 [Moritella sp. PE36]
          Length = 153

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 15/162 (9%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQIA EN      E  L      V  +             ++  E+++   D+   + 
Sbjct: 5   LDLQIATENEQKLPTEAQLNAWLNAVVKR------------FQDSAEVTIRIVDNTESQQ 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG DKPTNVLSFP  F   +G    +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNNDYRGKDKPTNVLSFP--FEVPEGIELDLLGDLIICKQVVEREAKEQQKPLTAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+ D++A  MEGLE  I+ +L   DPY  +
Sbjct: 111 VIHGTLHLLGYDHIIDEEAEEMEGLETEIMLELEFEDPYITE 152


>gi|294649234|ref|ZP_06726672.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824901|gb|EFF83666.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 161

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 8/164 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +    F  +   E+ +   D      L
Sbjct: 1   MKINLSLQQDFQTAELPLK---RSQIKKHIETALRHVGF--DADCEIGIACVDLAESHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG--CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +  LGD+V+   ++  EA    K   +H  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEMLSLLDAEPLGDLVICMPVVLQEAEEQQKTPMDHFTH 115

Query: 129 LIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGINDPYEVD 171
           L++HG LHLLGYDH   + DA  ME LE +IL+ L I +PY+ D
Sbjct: 116 LLVHGILHLLGYDHETSESDAEEMEALEIAILKKLNIANPYQAD 159


>gi|290968420|ref|ZP_06559959.1| metalloprotein, YbeY/ UPF0054 family [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781416|gb|EFD94005.1| metalloprotein, YbeY/ UPF0054 family [Megasphaera genomosp. type_1
           str. 28L]
          Length = 157

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE--NIVELSLVFTDSHRIE 68
           +++ I  E A         +  +  + K ++ + S+   V       E+S++   +  I 
Sbjct: 1   MNITITYEEA---------SFQQDAYEKIITRVCSEAALVYGLGPKAEISILLCHNEYIH 51

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSL---MLGDIVLAYEIIEIEANVLGKEFENH 125
            LN +YR ID+PT+VLSF       DG       +LGDI+++ E +  +A   G  FE  
Sbjct: 52  ALNKQYRHIDRPTDVLSFALNEGEDDGYDGPDTALLGDIIISLEKVAEQAAEYGHSFERE 111

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           L +L IHG LH+LGYDH++ +D   M G E  IL  LG 
Sbjct: 112 LAYLTIHGMLHILGYDHMEPEDKAEMRGEEEFILRRLGY 150


>gi|237746579|ref|ZP_04577059.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229377930|gb|EEO28021.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 176

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 71/172 (41%), Gaps = 30/172 (17%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + D      L      + V   +           +++L F D+     LN +YRG D  
Sbjct: 12  QYPDPRFKDILTRQKLRRWVQASLQM-------PADITLRFVDAEEGRALNRDYRGKDYA 64

Query: 81  TNVLSFPTAFAS----------SDGCSSLML-------------GDIVLAYEIIEIEANV 117
           TNVL+FP                D  + L L              DIVL  +++E EA  
Sbjct: 65  TNVLTFPYDDMEAFDLSAIGLSGDDPAPLELTSLATSPGAQTARADIVLCTDVLEAEAKE 124

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             K  + H  HL++HG LH  GYDH +D +A  ME LE  IL  LG  DPY 
Sbjct: 125 QAKSLDAHAAHLVVHGVLHAQGYDHTNDAEAGEMETLETKILAKLGYPDPYR 176


>gi|90416862|ref|ZP_01224791.1| hypothetical protein GB2207_06363 [marine gamma proteobacterium
           HTCC2207]
 gi|90331209|gb|EAS46453.1| hypothetical protein GB2207_06363 [marine gamma proteobacterium
           HTCC2207]
          Length = 164

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+Q A  +    DE  ++                     + +  ELS+   D       
Sbjct: 5   IDIQKACASEDSPDEDSIKRWLGAAIR------------DERDECELSIRIVDEQESADF 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG    TNVLSFP    + +     +LGD+V+   ++  EA+   K  + H  H++
Sbjct: 53  NQRYRGKSGATNVLSFPFDAVTPEPLP--ILGDLVICAPVVIREASDQQKTVDAHWAHIV 110

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           IHG LHLLGYDH++D+DA  MEGLE  I+  L    PY +
Sbjct: 111 IHGVLHLLGYDHIEDQDAEQMEGLETEIMLKLDFPAPYRI 150


>gi|330505000|ref|YP_004381869.1| putative metalloprotease [Pseudomonas mendocina NK-01]
 gi|328919286|gb|AEB60117.1| putative metalloprotease [Pseudomonas mendocina NK-01]
          Length = 159

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A  +    DE  LR  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQLAT-DGQHPDEAQLRRWCELALRQRTAD------------SELTIRLVDEAEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP            +LGD+V+   ++E EA   GK  + H  HL
Sbjct: 50  LNHTWRHKDYATNVLSFPAEIPDGI-LDIPLLGDLVICVPVVEREAAEQGKALDAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +IHG LHLLGYDH+++ +A  ME LER +L +LG  DPY 
Sbjct: 109 VIHGCLHLLGYDHIEEDEALEMEELERQLLAELGHPDPYA 148


>gi|325478360|gb|EGC81475.1| translation metalloprotein YbeY [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 448

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           ++   K V+ ++       E+  E+S+ F D   I  LN E+RG+D+PT+VLSFP     
Sbjct: 16  DIDLEKTVAEVLKTEGL--EDNYEVSITFVDRKEIHKLNKEFRGVDRPTDVLSFPLDDEI 73

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                 +MLGDIV+  ++ + +A   G      +++L  H  LHLLGYDH+++ +   M 
Sbjct: 74  LIPNEDIMLGDIVICLDVAKDQAIEFGHSLRREVMYLTCHSTLHLLGYDHMEEDEKREMR 133

Query: 153 GLERSILEDL 162
             E+ ++++L
Sbjct: 134 TREKEVMKNL 143


>gi|332969607|gb|EGK08625.1| metal-dependent hydrolase [Kingella kingae ATCC 23330]
          Length = 170

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 5/171 (2%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M  +  + P L +Q   +       I+  +  +V   K     I           ELSLV
Sbjct: 1   MKKQTKHFPFLRVQ---QQRFALAYINNSSANDVPSEKQFYQWIWHALKNFYRYAELSLV 57

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML--GDIVLAYEIIEIEANVL 118
             D       N +YR  D  TNVLSF              +  GD+++  +++  EA   
Sbjct: 58  LLDEEAARQYNRDYRQKDYATNVLSFAHNEGEFSFVEQDNILRGDLIICPQVVAKEAAEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           GK   +H  HL+IHG LHL+G+DH+ D +A  ME LE  +L  L I +PY 
Sbjct: 118 GKSLHDHFAHLVIHGTLHLIGFDHIQDDEAEQMEQLETELLAQLRIANPYA 168


>gi|254496479|ref|ZP_05109355.1| metal dependent hydrolase [Legionella drancourtii LLAP12]
 gi|254354296|gb|EET12955.1| metal dependent hydrolase [Legionella drancourtii LLAP12]
          Length = 158

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 12/161 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+Q A +  L  DE              ++++ S      +   EL++ F +   I  L
Sbjct: 5   IDIQNATDEPLAIDENE------------ITHVASLALRDYQKKAELTVRFVNHEEITYL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  +KPTNVL+FP+           +LGD+++  +++  E+N L K  E H   ++
Sbjct: 53  NNTYRKKNKPTNVLAFPSELPLEIQLECPLLGDVIICPDVLLAESNELNKTLEAHWSLIL 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+ D+DA VM+ +E  +L +LG  +PY+ +
Sbjct: 113 IHGILHLLGYDHIKDEDAAVMQSIEIKLLAELGYANPYDAE 153


>gi|145572763|sp|Q1GK93|RRMF_SILST RecName: Full=Probable rRNA maturation factor
          Length = 170

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/173 (35%), Positives = 91/173 (52%), Gaps = 18/173 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L + +E+A W D   L    +   +  ++ L      +++   E++++  D  RI  L
Sbjct: 1   MILDVVIEDARW-DAAALEKQAQEAVSATLAYL-----ELEDEDWEVTVLGCDDARIADL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R   KPTNVLS+P                  D      LGDI ++Y+    EAN+ 
Sbjct: 55  NAEFREKPKPTNVLSWPAQELAAAQDGGQPTPPEVDFMGDAALGDIAISYDTCVKEANLA 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            K  E+H+ HL++HG LHLLGYDH+ D DA +ME LE  IL  LGI DPY ++
Sbjct: 115 HKSREDHVRHLLVHGTLHLLGYDHIRDGDATIMETLEVGILGKLGIPDPYIIE 167


>gi|115522233|ref|YP_779144.1| hypothetical protein RPE_0204 [Rhodopseudomonas palustris BisA53]
 gi|122298061|sp|Q07V70|RRMF_RHOP5 RecName: Full=Probable rRNA maturation factor
 gi|115516180|gb|ABJ04164.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           BisA53]
          Length = 172

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/157 (41%), Positives = 89/157 (56%), Gaps = 3/157 (1%)

Query: 16  AVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           A E  +  D     +  E V  +A+    +     +    EL+++ +D   + TLN  +R
Sbjct: 7   ATEVLIVADCWQAESEAEAVVLRAIEAA-AAMVDAETADAELAVMLSDDAGVRTLNANWR 65

Query: 76  GIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           G+DKPTNVLSFP    S+     +  MLGDI +AYE    EA+  GK F++HL HL +HG
Sbjct: 66  GLDKPTNVLSFPALQPSATMPDDAPRMLGDIAIAYETTRREADDEGKPFDHHLSHLAVHG 125

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           FLHL+GYDH  + +A  ME LER IL  LG+ DPY  
Sbjct: 126 FLHLVGYDHETESEAEAMEQLERRILAQLGVPDPYAD 162


>gi|284009229|emb|CBA76319.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 164

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 85/162 (52%), Gaps = 15/162 (9%)

Query: 11  LDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A  ++    DE   +   E    +             +   E+++   D    + 
Sbjct: 15  LDLQLACSDHNGLPDETTFQHWLEAFLPQ------------FQAESEITIRIVDIAESQY 62

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D PTNVLSFP  F + D     +LGD+V+  +++E EA    K  + H  H+
Sbjct: 63  LNLTYRGKDNPTNVLSFP--FEALDNIPLPLLGDLVICRQVVEKEAIEQHKTLDAHWAHM 120

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH +D +A  ME +E  I++ LG  DPY+ +
Sbjct: 121 VIHGCLHLLGYDHQNDFEAEEMETIETEIMQKLGYPDPYQHE 162


>gi|329847362|ref|ZP_08262390.1| uncharacterized protein family UPF0054 family protein
           [Asticcacaulis biprosthecum C19]
 gi|328842425|gb|EGF91994.1| uncharacterized protein family UPF0054 family protein
           [Asticcacaulis biprosthecum C19]
          Length = 160

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 7/162 (4%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P +D++I  E   W D +        V   AV+  +    F  +   ++ ++  D   ++
Sbjct: 3   PLIDIEI--EEDGWLDALP---DAVDVVETAVTAALKAVNFTDQ--ADVVVLLCDDAEMK 55

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN EYR  DK TNVLSFP   +         LGD+ L  +    EA   GK  +NH++H
Sbjct: 56  RLNAEYRNKDKATNVLSFPAPKSMQIKGVLDHLGDMALGLQTCVREAREQGKTLKNHVLH 115

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           L +HG LHLLGYDH+ D +A  ME LERSIL++LG+ DPY  
Sbjct: 116 LSVHGTLHLLGYDHLHDAEAETMENLERSILKNLGVADPYAD 157


>gi|89069598|ref|ZP_01156937.1| hypothetical protein OG2516_13526 [Oceanicola granulosus HTCC2516]
 gi|89044796|gb|EAR50896.1| hypothetical protein OG2516_13526 [Oceanicola granulosus HTCC2516]
          Length = 163

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/167 (39%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + + VE A W + + L  L E   A  +  L      +  ++ E++L+  D  RI  L
Sbjct: 1   MSVDVIVEEARW-EAVGLAALAEPAVAATLERL-----GLDPDLYEVTLLGCDDARIAAL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF---------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           N ++RG   PTNVLS+P+                 +   LGDI +AYE    EA+  GK 
Sbjct: 55  NGDFRGKPAPTNVLSWPSEERGARIAGETPLPPEPTDPELGDIAIAYETCAREASEAGKP 114

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            E H  HLI+HG LHLLGYDH  D DA +MEGLE  IL  LG+ DPY
Sbjct: 115 LETHATHLIVHGTLHLLGYDHERDGDATLMEGLEVEILGKLGLPDPY 161


>gi|56963443|ref|YP_175174.1| metal-dependent hydrolase [Bacillus clausii KSM-K16]
 gi|59799080|sp|Q5WHE2|RRMF_BACSK RecName: Full=Probable rRNA maturation factor
 gi|56909686|dbj|BAD64213.1| metal-dependent hydrolase [Bacillus clausii KSM-K16]
          Length = 160

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 9/154 (5%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           +    DE    +  ++   K V N  ++   + +   E+S+ FT    I  LN E+RGID
Sbjct: 3   DVELNDEGQFLSSEQLQLVKDVLNHAAQEVSLSQQS-EVSVTFTTEEDIHELNREHRGID 61

Query: 79  KPTNVLSFPTAFASSDGCS--------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           +PT+VLSF     +SD             +LGDIV++   +E +A   G  FE  L  L+
Sbjct: 62  RPTDVLSFALNDETSDFDPTFHEELGLPNLLGDIVISVPHVERQAADYGHSFERELAFLV 121

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +HGFLHLLGYDH+++++   M   +  IL+  G+
Sbjct: 122 VHGFLHLLGYDHMNEEEEKQMFTKQEEILQSYGL 155


>gi|83854732|ref|ZP_00948262.1| hypothetical protein NAS141_08391 [Sulfitobacter sp. NAS-14.1]
 gi|83842575|gb|EAP81742.1| hypothetical protein NAS141_08391 [Sulfitobacter sp. NAS-14.1]
          Length = 174

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/171 (37%), Positives = 89/171 (52%), Gaps = 18/171 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +  E+  W   + L TLC      A+++L      +  +  E++++  D   I TLN 
Sbjct: 4   LDVIEEDPRWA-GLDLDTLCPRAMRAALAHLS-----LDADTAEVTVLACDDAHIATLNA 57

Query: 73  EYRGIDKPTNVLSFPTAF--ASSDGCSSLM----------LGDIVLAYEIIEIEANVLGK 120
           ++R    PTNVLS+P     A  DG   L           LGDI ++Y+    EA   G+
Sbjct: 58  DFRDKPTPTNVLSWPAEERGAVRDGELPLPVTPGFDNMLELGDIAISYDTCHAEAEAAGR 117

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +H+ HLI+HG LHLLGYDH  D DA +ME LE  IL  LG++DPY  D
Sbjct: 118 PMADHVTHLIVHGLLHLLGYDHERDGDATLMERLEVEILGKLGLDDPYRDD 168


>gi|254295427|ref|YP_003061450.1| hypothetical protein Hbal_3085 [Hirschia baltica ATCC 49814]
 gi|254043958|gb|ACT60753.1| protein of unknown function UPF0054 [Hirschia baltica ATCC 49814]
          Length = 161

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 8/164 (4%)

Query: 5   KVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
             N   L + + +E+  W   +     CE +   A+     K    +  +VE  ++ T+ 
Sbjct: 2   PDNPVILSVDLRIEDDGWSVALD---DCEAIIETALEAAAQKTG--ESGLVE--VLLTND 54

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
             ++TLN ++RG DKPT+VLSFP   AS  G  +  LGD+ L  ++ + +++ LG++F  
Sbjct: 55  AEMQTLNAQWRGKDKPTDVLSFPAEGASMPGMQT-FLGDLALGLDVAKADSDKLGRDFRL 113

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H++HL++HGFLHLLGYDH+ D +A  MEGLE  IL  LG+ DPY
Sbjct: 114 HVMHLLVHGFLHLLGYDHMSDDEANTMEGLEAQILAPLGLPDPY 157


>gi|255319764|ref|ZP_05360969.1| putative metalloprotease [Acinetobacter radioresistens SK82]
 gi|262380298|ref|ZP_06073452.1| metal-dependent hydrolase [Acinetobacter radioresistens SH164]
 gi|255303083|gb|EET82295.1| putative metalloprotease [Acinetobacter radioresistens SK82]
 gi|262297744|gb|EEY85659.1| metal-dependent hydrolase [Acinetobacter radioresistens SH164]
          Length = 159

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 8/164 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L ++++      E+ L+        K +   +   +   +   E+ +   D  + + L
Sbjct: 1   MKLSLSLQQTFVAPELVLK---RAYLKKVIETTLR--HLDVKQDCEIGIACVDLDQSQQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N EYR  DKPTNVLSFP+          ++  LGD+V+   ++  EA    K    H  H
Sbjct: 56  NLEYRRKDKPTNVLSFPSEIPEEILPMLAARPLGDLVICIPVVLQEAAEQQKVPVEHFTH 115

Query: 129 LIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYEVD 171
           +++HG LHLLGYDH + D+DA  ME LE  IL  LG+N+PY+ +
Sbjct: 116 MLVHGTLHLLGYDHEISDEDADEMEALEIEILAKLGLNNPYQEE 159


>gi|147677227|ref|YP_001211442.1| putative metalloprotease [Pelotomaculum thermopropionicum SI]
 gi|189040627|sp|A5D3W2|RRMF_PELTS RecName: Full=Probable rRNA maturation factor
 gi|146273324|dbj|BAF59073.1| predicted metal-dependent hydrolase [Pelotomaculum
           thermopropionicum SI]
          Length = 152

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS- 93
           +  +A   ++    + +E   E+SLVF D   I  LN +YRG+D PT+VLSF        
Sbjct: 21  LLTRAAQEVLKAEGYGEE--AEVSLVFVDDAYIHGLNRQYRGVDAPTDVLSFAMQEGEPL 78

Query: 94  -DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
             G   L+LGD+V++ +  E +A   G   +    +L +HG LHLLGYDH  +++  +M 
Sbjct: 79  AGGEEELILGDVVISLQAAERQAGEYGHSLQREAAYLAVHGVLHLLGYDHQGEEERKIMR 138

Query: 153 GLERSILEDLGIN 165
             E  +L  L + 
Sbjct: 139 RKEEEVLGRLNLT 151


>gi|307610143|emb|CBW99689.1| hypothetical protein LPW_14571 [Legionella pneumophila 130b]
          Length = 158

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 75/132 (56%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           ++ L S      +   EL++   D   +  LN  YR  +KPTNVL+FP +   +      
Sbjct: 22  ITKLASLALRDHKQDAELTVRLVDVEEMTYLNHTYRKKNKPTNVLAFPCSLPENIELECP 81

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGD+V+  E++  E+    K    H   ++IHG LHLLGYDH+ D++A +M+ LE  +L
Sbjct: 82  LLGDVVICPEVLLAESAQFNKSLHAHWSLILIHGVLHLLGYDHIKDEEASIMQMLEAKLL 141

Query: 160 EDLGINDPYEVD 171
            +LG  +PYEV+
Sbjct: 142 AELGYANPYEVE 153


>gi|83941255|ref|ZP_00953717.1| hypothetical protein EE36_03463 [Sulfitobacter sp. EE-36]
 gi|83847075|gb|EAP84950.1| hypothetical protein EE36_03463 [Sulfitobacter sp. EE-36]
          Length = 174

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 18/171 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L +  E+  W   + L TLC       +++L      +  +  E++++  D   I TLN 
Sbjct: 4   LDVIEEDPRWA-GLDLDTLCPRAMRATLAHLS-----LDADTAEVTVLACDDAHIATLNA 57

Query: 73  EYRGIDKPTNVLSFPTAF--ASSDGCSSLM----------LGDIVLAYEIIEIEANVLGK 120
           ++R    PTNVLS+P     A+ DG   L           LGDI ++Y+    EA   G+
Sbjct: 58  DFRDKPTPTNVLSWPAEERGAARDGELPLPVTPGFDNMLELGDIAISYDTCHAEAEAAGR 117

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +H+ HLI+HG LHLLGYDH  D DA +ME LE  IL  LG++DPY  D
Sbjct: 118 PMADHVTHLIVHGLLHLLGYDHERDGDATLMERLEVEILGKLGLDDPYRDD 168


>gi|52841670|ref|YP_095469.1| metal dependent hydrolase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54294525|ref|YP_126940.1| hypothetical protein lpl1601 [Legionella pneumophila str. Lens]
 gi|54297350|ref|YP_123719.1| hypothetical protein lpp1395 [Legionella pneumophila str. Paris]
 gi|148358971|ref|YP_001250178.1| metal dependent hydrolase [Legionella pneumophila str. Corby]
 gi|296107020|ref|YP_003618720.1| Predicted metal-dependent hydrolase [Legionella pneumophila 2300/99
           Alcoy]
 gi|59799081|sp|Q5WW59|RRMF_LEGPL RecName: Full=Probable rRNA maturation factor
 gi|59799082|sp|Q5X5C5|RRMF_LEGPA RecName: Full=Probable rRNA maturation factor
 gi|59799085|sp|Q5ZVK0|RRMF_LEGPH RecName: Full=Probable rRNA maturation factor
 gi|166235104|sp|A5IBT2|RRMF_LEGPC RecName: Full=Probable rRNA maturation factor
 gi|52628781|gb|AAU27522.1| metal dependent hydrolase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53751135|emb|CAH12546.1| hypothetical protein lpp1395 [Legionella pneumophila str. Paris]
 gi|53754357|emb|CAH15841.1| hypothetical protein lpl1601 [Legionella pneumophila str. Lens]
 gi|148280744|gb|ABQ54832.1| metal dependent hydrolase [Legionella pneumophila str. Corby]
 gi|295648921|gb|ADG24768.1| Predicted metal-dependent hydrolase [Legionella pneumophila 2300/99
           Alcoy]
          Length = 158

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 76/132 (57%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           ++ L S      +   EL++   D   +  LN  YR  +KPTNVL+FP +  ++      
Sbjct: 22  ITKLASLALRDHKQDAELTVRLVDVEEMTYLNHTYRKKNKPTNVLAFPCSLPANIELECP 81

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGD+V+  E++  E+    K    H   ++IHG LHLLGYDH+ D++A +M+ LE  +L
Sbjct: 82  LLGDVVICPEVLLAESAQFNKSLHAHWSLILIHGVLHLLGYDHIKDEEASIMQMLEAKLL 141

Query: 160 EDLGINDPYEVD 171
            +LG  +PYEV+
Sbjct: 142 AELGYANPYEVE 153


>gi|313895824|ref|ZP_07829378.1| translation metalloprotein YbeY [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975249|gb|EFR40710.1| translation metalloprotein YbeY [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 154

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 9/156 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I +  +   +E+ +    E    +AV  +   G        E+S+  T+   I  +N 
Sbjct: 2   MEITI--SAQPEELCIAPGDEAAVRRAVETV---GRLYGAEGAEVSVTLTNDAYIHEINR 56

Query: 73  EYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +YRG+D+PT+V+SF    +      D  +  +LGD+V++ E    +A   G  +   L  
Sbjct: 57  QYRGVDRPTDVISFALMESEEPEILDDPAGDVLGDLVISLERARAQAEEYGHSYLRELSF 116

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           L +HG LHLLGYDH++D +   ME  +R ++E LGI
Sbjct: 117 LTVHGMLHLLGYDHMEDAERAEMEEEQRHVMEALGI 152


>gi|237810909|ref|YP_002895360.1| putative conserved hypothetical protein [Burkholderia pseudomallei
           MSHR346]
 gi|237506403|gb|ACQ98721.1| putative conserved hypothetical protein [Burkholderia pseudomallei
           MSHR346]
          Length = 274

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 125 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 176

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 177 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 232

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 233 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 274


>gi|22125096|ref|NP_668519.1| putative metalloprotease [Yersinia pestis KIM 10]
 gi|45440925|ref|NP_992464.1| putative metalloprotease [Yersinia pestis biovar Microtus str.
           91001]
 gi|108808472|ref|YP_652388.1| putative metalloprotease [Yersinia pestis Antiqua]
 gi|108811268|ref|YP_647035.1| putative metalloprotease [Yersinia pestis Nepal516]
 gi|145599897|ref|YP_001163973.1| putative metalloprotease [Yersinia pestis Pestoides F]
 gi|149365481|ref|ZP_01887516.1| hypothetical protein YPE_0646 [Yersinia pestis CA88-4125]
 gi|162421082|ref|YP_001606319.1| putative metalloprotease [Yersinia pestis Angola]
 gi|165925376|ref|ZP_02221208.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937587|ref|ZP_02226149.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008624|ref|ZP_02229522.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212421|ref|ZP_02238456.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399628|ref|ZP_02305152.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167422550|ref|ZP_02314303.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423805|ref|ZP_02315558.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467946|ref|ZP_02332650.1| hypothetical protein YpesF_08614 [Yersinia pestis FV-1]
 gi|218929699|ref|YP_002347574.1| putative metalloprotease [Yersinia pestis CO92]
 gi|229838166|ref|ZP_04458325.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229895958|ref|ZP_04511128.1| conserved protein [Yersinia pestis Pestoides A]
 gi|229898723|ref|ZP_04513868.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901506|ref|ZP_04516628.1| conserved protein [Yersinia pestis Nepal516]
 gi|270489692|ref|ZP_06206766.1| metalloprotein, YbeY/ UPF0054family [Yersinia pestis KIM D27]
 gi|294504422|ref|YP_003568484.1| hypothetical protein YPZ3_2312 [Yersinia pestis Z176003]
 gi|26006931|sp|Q8ZDF0|RRMF_YERPE RecName: Full=Probable rRNA maturation factor
 gi|123245656|sp|Q1C529|RRMF_YERPA RecName: Full=Probable rRNA maturation factor
 gi|123246625|sp|Q1CKP5|RRMF_YERPN RecName: Full=Probable rRNA maturation factor
 gi|166228416|sp|A4TNY8|RRMF_YERPP RecName: Full=Probable rRNA maturation factor
 gi|226701655|sp|A9R6Y0|RRMF_YERPG RecName: Full=Probable rRNA maturation factor
 gi|21957951|gb|AAM84770.1|AE013722_9 hypothetical protein y1193 [Yersinia pestis KIM 10]
 gi|45435784|gb|AAS61341.1| Predicted metal-dependent hydrolase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108774916|gb|ABG17435.1| hypothetical protein YPN_1104 [Yersinia pestis Nepal516]
 gi|108780385|gb|ABG14443.1| hypothetical protein YPA_2479 [Yersinia pestis Antiqua]
 gi|115348310|emb|CAL21241.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|145211593|gb|ABP41000.1| hypothetical protein YPDSF_2634 [Yersinia pestis Pestoides F]
 gi|149291894|gb|EDM41968.1| hypothetical protein YPE_0646 [Yersinia pestis CA88-4125]
 gi|162353897|gb|ABX87845.1| conserved hypothetical protein TIGR00043 [Yersinia pestis Angola]
 gi|165914337|gb|EDR32952.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922983|gb|EDR40134.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165993006|gb|EDR45307.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206352|gb|EDR50832.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166958564|gb|EDR55585.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167052132|gb|EDR63540.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057975|gb|EDR67721.1| conserved hypothetical protein TIGR00043 [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229681435|gb|EEO77529.1| conserved protein [Yersinia pestis Nepal516]
 gi|229688271|gb|EEO80342.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229694532|gb|EEO84579.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700881|gb|EEO88910.1| conserved protein [Yersinia pestis Pestoides A]
 gi|262362588|gb|ACY59309.1| hypothetical protein YPD4_2402 [Yersinia pestis D106004]
 gi|262366408|gb|ACY62965.1| hypothetical protein YPD8_2290 [Yersinia pestis D182038]
 gi|270338196|gb|EFA48973.1| metalloprotein, YbeY/ UPF0054family [Yersinia pestis KIM D27]
 gi|294354881|gb|ADE65222.1| hypothetical protein YPZ3_2312 [Yersinia pestis Z176003]
 gi|320016177|gb|ADV99748.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 157

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA  ++     E   +   E V              + + + E+++   D 
Sbjct: 1   MSQVILDLQIACADSQGLPTEGDFQRWLEAVLP------------LFQPVSEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA    K    
Sbjct: 49  AESHDLNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEKEAIEQEKALLA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH+DD++A  ME +E  I+  LG  DPY
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDEEAEEMELIETEIMHGLGYPDPY 150


>gi|238022353|ref|ZP_04602779.1| hypothetical protein GCWU000324_02260 [Kingella oralis ATCC 51147]
 gi|237866967|gb|EEP68009.1| hypothetical protein GCWU000324_02260 [Kingella oralis ATCC 51147]
          Length = 167

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 6/140 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F + + + +   Y    +  E+SL+  D       N +YR  D  TNVLSF     
Sbjct: 32  SERQFYQWIWHALKHEY----HRAEISLLLLDEADARAYNRDYRQKDYATNVLSFALNEG 87

Query: 92  S--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                     + GD+++  +++  EA   GK   +H  HL++HG LHL+GYDH++D +A 
Sbjct: 88  EMMLPAQDDTLRGDLIICPQVVRREATEQGKLLAHHYAHLVLHGTLHLMGYDHINDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYE 169
            ME LE  +L  LGI +PYE
Sbjct: 148 EMEALETRLLAQLGIANPYE 167


>gi|88705748|ref|ZP_01103458.1| Protein of unknown function, UPF0054 [Congregibacter litoralis
           KT71]
 gi|88700261|gb|EAQ97370.1| Protein of unknown function, UPF0054 [Congregibacter litoralis
           KT71]
          Length = 163

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E   ++  +    +A    ++ G        E +L   D   ++ LN +YR  + PTNVL
Sbjct: 9   ETVEKSPDDQTLLRAAETALTVGSPAAHGHWEAALRIVDEAEMQQLNAQYRARNTPTNVL 68

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SFP    +    +  +LGDIV+   +++ EA   GK    H  H+++HG LHLLG+DH  
Sbjct: 69  SFPADLPAD--VTLNLLGDIVICAPVVKKEATNQGKPLAAHWDHMLVHGVLHLLGFDHES 126

Query: 145 DKDACVMEGLERSILEDLGINDPYEVD 171
           D +A  ME LE   L  LG   PY  D
Sbjct: 127 DAEATHMESLETQALATLGWPCPYNAD 153


>gi|167718180|ref|ZP_02401416.1| hypothetical protein BpseD_04113 [Burkholderia pseudomallei DM98]
 gi|167901393|ref|ZP_02488598.1| hypothetical protein BpseN_03886 [Burkholderia pseudomallei NCTC
           13177]
          Length = 273

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 124 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 175

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 176 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 231

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 232 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 273


>gi|228993242|ref|YP_001057758.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           pseudomallei 668]
          Length = 273

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 124 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 175

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 176 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 231

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 232 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 273


>gi|237809458|ref|YP_002893898.1| hypothetical protein Tola_2719 [Tolumonas auensis DSM 9187]
 gi|259646893|sp|C4LBN8|RRMF_TOLAT RecName: Full=Probable rRNA maturation factor
 gi|237501719|gb|ACQ94312.1| protein of unknown function UPF0054 [Tolumonas auensis DSM 9187]
          Length = 155

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 12/161 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQIA       D   L +  E  F + +   +       +   E+++   D      L
Sbjct: 5   LDLQIAC-----ADSTGLPS--ETQFQQWLDTAV----LPFQQEAEVTIRLVDEAESNEL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP      +     +LGD+++  +++E EA    K  E+H  H++
Sbjct: 54  NLTYRGKDKPTNVLSFPFE-CPPEVEDFPLLGDLIICRQVVEKEALEQQKTLESHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH++D++A  ME LE+  ++ LG  DPY+ D
Sbjct: 113 IHGSLHLLGYDHIEDEEAEEMEALEKEFMQTLGFPDPYKDD 153


>gi|3639064|gb|AAC36473.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 140

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F   +  +I +     +   E+++   D      L   YRG DKPTNVLSFP  F 
Sbjct: 5   DEAQFQTWLDGVIPQ----FQEEAEVTIRLVDEAETPDLILTYRGKDKPTNVLSFP--FE 58

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           +  G    +LGD++++ +++E EA       E H  H+++HG LHLLGYDH+DD +A  M
Sbjct: 59  APAGIEMPLLGDLIISRQVVEQEAQEQTNPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEM 118

Query: 152 EGLERSILEDLGINDPYEVD 171
           E LE  I+  +G  DPY  +
Sbjct: 119 ESLETEIMLAMGYEDPYIAE 138


>gi|126219079|gb|ABN82585.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           668]
          Length = 274

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 125 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 176

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 177 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 232

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 233 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 274


>gi|323490063|ref|ZP_08095284.1| putative metalloprotease [Planococcus donghaensis MPA1U2]
 gi|323396359|gb|EGA89184.1| putative metalloprotease [Planococcus donghaensis MPA1U2]
          Length = 160

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 11/157 (7%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           IA++   + DE       E+ F K +    +K   V ++  E+S+ F  +  I  +N EY
Sbjct: 2   IAID---FMDETESLDQKELDFVKKILEHAAKQEKVTDS--EVSVTFVTNEMIRDINREY 56

Query: 75  RGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           RG D+PT+V+SF                   MLGDI+++ +  + +A   G  FE  L  
Sbjct: 57  RGKDQPTDVISFAMEELGEGETAIIGSQEPRMLGDIIISLDRTKEQAEDFGHSFERELGF 116

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L IHGFLHLLGYDH+ ++D   M   +  IL  LGI 
Sbjct: 117 LAIHGFLHLLGYDHMTEEDEKKMFSRQEEILVSLGIT 153


>gi|145572775|sp|Q0BC19|RRMF_BURCM RecName: Full=Probable rRNA maturation factor
          Length = 175

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 11/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L+  ++V+   +GDE+           K ++  I    F   +  +L++ F       T
Sbjct: 25  ELEFDLSVQ---YGDEVTGDVRKACPKRKLIAEWIEPALF---SSAQLTVRFVGEEEGRT 78

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D PTNVL+F             ++GD+VL   ++E EA   GK    H  HL
Sbjct: 79  LNDGYRHKDYPTNVLTFAY----DPLPDGTVIGDLVLCCPVVEKEAQEQGKPLAAHYAHL 134

Query: 130 IIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           ++HG LH  GYDH   ++DA  ME LE +IL  LG  +PY+
Sbjct: 135 LVHGALHAQGYDHETSEEDAAEMEALEVAILAKLGFPNPYQ 175


>gi|145572766|sp|Q1BTS1|RRMF_BURCA RecName: Full=Probable rRNA maturation factor
 gi|145572773|sp|A0KAB8|RRMF_BURCH RecName: Full=Probable rRNA maturation factor
          Length = 172

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 11/160 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L+L ++V+   +GDEI       +   K ++  I    F      +L++ F   +   TL
Sbjct: 23  LELDLSVQ---YGDEITSDVRKTLPKRKLIAEWIEPALFA---SAQLTVRFVGENEGRTL 76

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR  D PTNVL+F    A        ++GD+VL   ++E EA+  GK    H  HL+
Sbjct: 77  NAGYRHKDYPTNVLTFAYDAAP----DGTVIGDLVLCCPVVEKEAHDQGKPLAAHYAHLL 132

Query: 131 IHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           +HG LH  GYDH   D+DA  ME LE  IL  LG  +PY+
Sbjct: 133 VHGALHAQGYDHETSDEDAAEMEALEVDILAKLGFPNPYQ 172


>gi|238752612|ref|ZP_04614085.1| metalloprotease [Yersinia rohdei ATCC 43380]
 gi|238709203|gb|EEQ01448.1| metalloprotease [Yersinia rohdei ATCC 43380]
          Length = 117

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +++   D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA 
Sbjct: 1   MTIRIVDEAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAI 58

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
              K    H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 59  EQEKALLAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 110


>gi|332285329|ref|YP_004417240.1| hypothetical protein PT7_2076 [Pusillimonas sp. T7-7]
 gi|330429282|gb|AEC20616.1| hypothetical protein PT7_2076 [Pusillimonas sp. T7-7]
          Length = 164

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 7/161 (4%)

Query: 12  DLQIAVENALWGDEIH---LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           +L + V+ A+   E+    LR   +   +  +      G   +     L+L   D+    
Sbjct: 4   ELALTVQYAIPAAELPRWRLRRWVQHALSGVLKAEAEAGAPGRFRAAALALRLVDADEGR 63

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN E+R  D  TNVL+F            +  GDIVL   ++  EA    K   +H  H
Sbjct: 64  RLNREFRHKDYATNVLTFEYGIDP----EGVASGDIVLCLPVLYREAAEQKKSILDHAAH 119

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           L +HG LH LGYDH++ ++A  ME LE +IL  +G  DPY+
Sbjct: 120 LTVHGVLHALGYDHIEPEEATDMEELETAILAKMGFADPYQ 160


>gi|167822819|ref|ZP_02454290.1| hypothetical protein Bpseu9_04036 [Burkholderia pseudomallei 9]
          Length = 273

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F        ++ F  +    
Sbjct: 124 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIFSDTQF---TVRFVGADEGR 175

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 176 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 231

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 232 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 273


>gi|82703810|ref|YP_413376.1| hypothetical protein Nmul_A2697 [Nitrosospira multiformis ATCC
           25196]
 gi|123543797|sp|Q2Y5I7|RRMF_NITMU RecName: Full=Probable rRNA maturation factor
 gi|82411875|gb|ABB75984.1| Protein of unknown function UPF0054 [Nitrosospira multiformis ATCC
           25196]
          Length = 189

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 15/146 (10%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----- 86
              +  K V   ++       +  E++L   D      LN ++R  D  TNVL+F     
Sbjct: 40  SRALLRKWVKAALA-------HDAEIALRIVDEEEGHRLNRDFRNKDYATNVLTFVYRDG 92

Query: 87  ---PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
              P +       +  + GDIVL   ++E EA    K+   H  HL +HG LHL GYDH 
Sbjct: 93  QIHPDSPLGEKRGAYPLTGDIVLCAPVVENEAGQQQKDLMAHYAHLTVHGVLHLQGYDHQ 152

Query: 144 DDKDACVMEGLERSILEDLGINDPYE 169
           +D+DA  ME  E  IL  LG  DPY 
Sbjct: 153 EDEDAKNMEETETRILAWLGYEDPYA 178


>gi|227500708|ref|ZP_03930757.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
 gi|227217166|gb|EEI82515.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
          Length = 443

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +    K +  ++       E+  E+S+ F D   I+ LN E+R ID+ T+VLSFP     
Sbjct: 16  DADLEKTIREVLKTEGL--EDNYEVSITFVDREEIQRLNKEFRNIDRQTDVLSFPLDDDM 73

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           +     +MLGDIV+  ++ + +A   G      +++L  H  LHLLGYDH+++ D   M 
Sbjct: 74  NLPGEDIMLGDIVICMDVAKDQAREFGHSLRREIMYLTCHSTLHLLGYDHMEEDDKRKMR 133

Query: 153 GLERSILEDL 162
             E+ I+ +L
Sbjct: 134 AREKEIMRNL 143


>gi|226196767|ref|ZP_03792347.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           Pakistan 9]
 gi|225931298|gb|EEH27305.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           Pakistan 9]
          Length = 274

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F        ++ F  +    
Sbjct: 125 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIFSDTQF---TVRFVGADEGR 176

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 177 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 232

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 233 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 274


>gi|224476678|ref|YP_002634284.1| hypothetical protein Sca_1192 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254799973|sp|B9DNL6|RRMF_STACT RecName: Full=Probable rRNA maturation factor
 gi|222421285|emb|CAL28099.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 153

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 5/135 (3%)

Query: 36  FAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           + + + NL+  +K     E+  ELS+ F +   I+ +N +YR  DK T+V+SF       
Sbjct: 17  WYQQIDNLLTFAKKEEKIEDDAELSVTFVNKQEIQEINRDYRNKDKVTDVISFALEEDEP 76

Query: 94  D---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           D        +LGDI++  ++ + +A   G  FE  L  L +HGFLHLLGYDH+++ D   
Sbjct: 77  DIEGLDMPRVLGDIIICADVAKEQAEEYGHSFERELGFLALHGFLHLLGYDHMNEADEKE 136

Query: 151 MEGLERSILEDLGIN 165
           M G ++ IL++ G+ 
Sbjct: 137 MFGRQKLILDNYGLT 151


>gi|110636245|ref|YP_676453.1| hypothetical protein Meso_3921 [Mesorhizobium sp. BNC1]
 gi|123161515|sp|Q11BD7|RRMF_MESSB RecName: Full=Probable rRNA maturation factor
 gi|110287229|gb|ABG65288.1| protein of unknown function UPF0054 [Chelativorans sp. BNC1]
          Length = 163

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/169 (39%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M   + + P   +  AV    W  E  LR L E       +   +           LS++
Sbjct: 1   MVEGEASSPAFTIDYAVATGDWPAEDVLRGLVER------AVTAAAARTDGPLQASLSVL 54

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           FTD   +  LN  +RG DKPTNVLSFP   +     +    GDI L YE +  EA   GK
Sbjct: 55  FTDDAEMRALNARFRGKDKPTNVLSFPAPDSMVPPGTPRHFGDIALGYETVSREAKEEGK 114

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            FE+HL HL++HGFLHL G+DH  + +A  ME LER IL+ L I DPY 
Sbjct: 115 SFEHHLTHLVVHGFLHLAGHDHETEVEAEEMEQLEREILQSLAIGDPYA 163


>gi|325276220|ref|ZP_08142019.1| metal-binding heat shock protein [Pseudomonas sp. TJI-51]
 gi|324098649|gb|EGB96696.1| metal-binding heat shock protein [Pseudomonas sp. TJI-51]
          Length = 157

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LD+Q A + A   D+   R  CE+   +  ++             E+++   D      
Sbjct: 3   ELDIQRATDAAAPSDD-DFRRWCELALRQRSAD------------SEMTIRLVDEAEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSFP A    D     +LGD+V+   ++E EA   GK    H  HL
Sbjct: 50  LNHTYRHKDYATNVLSFP-ADVPDDLLDIPLLGDLVICVAVVEREAAEQGKALNAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  MEGLER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIDDEEAEEMEGLERELLAELGHPDPYADD 150


>gi|255659361|ref|ZP_05404770.1| putative metalloprotease [Mitsuokella multacida DSM 20544]
 gi|260848445|gb|EEX68452.1| putative metalloprotease [Mitsuokella multacida DSM 20544]
          Length = 154

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 4/129 (3%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GC 96
           +     G        E+S+  T++  I  LN +YRGID+PT+VLSF    +       G 
Sbjct: 24  AAAQKVGELYGVENGEVSITLTNNAYIHELNRQYRGIDRPTDVLSFALNESEEPEVTGGA 83

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
              +LGD+V++ E  E +A   G   +  +  L +HG LHLLGYDH+++K+   ME  +R
Sbjct: 84  DINVLGDLVISVERAEEQAKDFGHSVKREMAFLTVHGMLHLLGYDHMEEKERLEMEQEQR 143

Query: 157 SILEDLGIN 165
            ++E LGI 
Sbjct: 144 FVMEKLGIP 152


>gi|94309396|ref|YP_582606.1| unkown domain/putative metalloprotease fusion protein [Cupriavidus
           metallidurans CH34]
 gi|93353248|gb|ABF07337.1| putative metal-dependent hydrolase [Cupriavidus metallidurans CH34]
          Length = 245

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 66/133 (49%), Gaps = 7/133 (5%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
            K +   +    +       L++ F D     TLN  YRG D  TNVL+F  A    D  
Sbjct: 116 RKQIEKWVKSALYADAA---LTVRFVDETEGRTLNRSYRGKDYATNVLTFAYAENDDDPV 172

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +    GDIVL   ++E EA    K  E H  HLI+HG LH  GY+H DD +A  ME +E 
Sbjct: 173 A----GDIVLCCPVVESEAKAQKKSLEAHYAHLIVHGVLHAQGYEHDDDTEAEEMEAIET 228

Query: 157 SILEDLGINDPYE 169
             L+ LG  DPY+
Sbjct: 229 ETLQALGFEDPYK 241


>gi|330828615|ref|YP_004391567.1| metalloprotease [Aeromonas veronii B565]
 gi|328803751|gb|AEB48950.1| metalloprotease [Aeromonas veronii B565]
          Length = 154

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 15/162 (9%)

Query: 11  LDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ+A         E  L+   +                  +   E+++   D      
Sbjct: 5   LDLQLASASTDGLPTEAQLQGWLDGTI------------LGFQQEAEVTVRIVDEAESNE 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG DKPTNVLSFP  F +  G    +LGD+V+  +++E EA   GK    H  H+
Sbjct: 53  LNLTYRGKDKPTNVLSFP--FEAPPGLELPLLGDLVICRQVVEREAEEQGKPLMAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D++A  ME LER I+++LG  DPY  D
Sbjct: 111 VVHGSLHLLGYDHIEDEEAEEMEALERDIMQELGFADPYLND 152


>gi|15613926|ref|NP_242229.1| hypothetical protein BH1363 [Bacillus halodurans C-125]
 gi|20140844|sp|Q9KD56|RRMF_BACHD RecName: Full=Probable rRNA maturation factor
 gi|10173979|dbj|BAB05082.1| BH1363 [Bacillus halodurans C-125]
          Length = 159

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++QI        D     T  +    + + +  ++   + E   ELSL F     I+ L
Sbjct: 1   MNIQI-----DMIDHTDTLTEKQETLIRELLHEAARYEKLAEGTYELSLSFVSDEEIQEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFA-------SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           N +YRG D+PT+V+SF              +  +  +LGDI+++    + +A   G  FE
Sbjct: 56  NRDYRGKDQPTDVISFALNEVGEGEQPVEPEAGTPNLLGDIIVSIPRCQEQAEAYGHSFE 115

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L  LI+HGFLHLLGYDH+ + +   M   +  IL   G+ 
Sbjct: 116 RELAFLIVHGFLHLLGYDHMSEDEEKKMFMRQEDILTAYGLT 157


>gi|209694557|ref|YP_002262485.1| putative metalloprotease [Aliivibrio salmonicida LFI1238]
 gi|226703999|sp|B6EIN6|RRMF_ALISL RecName: Full=Probable rRNA maturation factor
 gi|208008508|emb|CAQ78679.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 153

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA EN     E  L +       K   + ++      +   EL++   D      
Sbjct: 4   ELDLQIACEN-----EKDLPS------EKDFMSWLNAVLPQFQPQAELTIRIVDEKESHE 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG+DKPTNVLSFP  F +       +LGD+++  +++E EA    K    H  H+
Sbjct: 53  LNHQYRGMDKPTNVLSFP--FEAPPEVEIDLLGDLIICRQVVEKEAVEQNKPLLAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D++A  ME LE  +++++G  DPY  +
Sbjct: 111 VVHGSLHLLGYDHIEDEEAEEMESLETELMQEMGFEDPYLAE 152


>gi|153873752|ref|ZP_02002229.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152069781|gb|EDN67770.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 181

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           + VEL++   D    + LN ++R    PTN+LSFP  F S       +LGD+V+   ++ 
Sbjct: 62  SQVELTIRIVDDEEAKQLNEKWRQRPNPTNILSFP--FESPLDLEIPLLGDLVICASVVA 119

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            EA    K  + H  HL+IHG LHLLGYDH++      ME  E  IL DLG ++PY++
Sbjct: 120 REATEQYKSLDAHWAHLVIHGTLHLLGYDHIEIAQEQFMESTEICILYDLGYSNPYQL 177


>gi|46577519|sp|Q8Y208|RRMF_RALSO RecName: Full=Probable rRNA maturation factor
          Length = 187

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/161 (36%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L L + V++   GD +       +   K +   I+   F      +L++ F D     T
Sbjct: 36  MLTLDLTVQH---GDALKAAARKALPKQKDIEAWIAPALFAD---AQLNVRFVDEEEGRT 89

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D  TNVL+F  A    D  ++    DIVL   ++E EA   GK    H  HL
Sbjct: 90  LNHTYRGKDYATNVLTFSYAETEDDPVAA----DIVLCCPVVEQEAKDQGKPLRAHYAHL 145

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           I+HG LH  GYDH D   A  MEG+E  +L  LG  DPY  
Sbjct: 146 IVHGALHAQGYDHEDPAQAEEMEGIETEVLAGLGFPDPYAD 186


>gi|89100467|ref|ZP_01173329.1| hypothetical protein B14911_05536 [Bacillus sp. NRRL B-14911]
 gi|89084810|gb|EAR63949.1| hypothetical protein B14911_05536 [Bacillus sp. NRRL B-14911]
          Length = 156

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 7/153 (4%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  + DE +      +   + + N  ++   V E   ELS+ F  + RI+ +N EYR  D
Sbjct: 4   NIDFLDETNEVKSSHIEQVEKLLNFAAEKENV-EAGSELSVTFVTNDRIQEINREYRDKD 62

Query: 79  KPTNVLSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           KPT+V+SF                   +LGDI+++ +  E +A   G  FE  L  L +H
Sbjct: 63  KPTDVISFAMEELGEGETEIAGEGIPRVLGDIIISIQRTEEQAGEYGHSFERELGFLAVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLHLLGYDH  D++   M G ++ IL++ G+ 
Sbjct: 123 GFLHLLGYDHETDEEEREMFGRQKDILDEYGLT 155


>gi|26991468|ref|NP_746893.1| putative metalloprotease [Pseudomonas putida KT2440]
 gi|37999614|sp|Q88DN6|RRMF_PSEPK RecName: Full=Probable rRNA maturation factor
 gi|24986545|gb|AAN70357.1|AE016677_8 conserved hypothetical protein TIGR00043 [Pseudomonas putida
           KT2440]
          Length = 157

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LD+Q A + A   D   LR  CE+   +  ++             E+++   D      
Sbjct: 3   ELDIQRATDAATPEDAA-LRRWCELALRQRSAD------------SEMTIRLVDEAEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSFP A    D     +LGD+V+   ++E EA   GK  E H  HL
Sbjct: 50  LNHTYRHKDYATNVLSFP-ADVPDDLLDIPLLGDLVICVAVVEREAAEQGKSLEAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D++A  ME LER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIEDEEAEEMESLERELLAELGHPDPYADD 150


>gi|90022942|ref|YP_528769.1| lipoate-protein ligase B [Saccharophagus degradans 2-40]
 gi|123090090|sp|Q21FH2|RRMF_SACD2 RecName: Full=Probable rRNA maturation factor
 gi|89952542|gb|ABD82557.1| protein of unknown function UPF0054 [Saccharophagus degradans 2-40]
          Length = 149

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 8/156 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L I ++ A   D   L +       K     +      + N  ELS+   D    + LN 
Sbjct: 2   LTIDIQQASTADASQLPS------DKQFEIWVEAALQQRMNEAELSIRIVDEDESQALNL 55

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +YRG DK TNVLSFP      DG    +LGD+V+  +++  EA   GK    H  H+++H
Sbjct: 56  QYRGKDKSTNVLSFPCEL--PDGVELPLLGDLVICAQVVAKEALEQGKLLHAHWAHMVVH 113

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LHLLGYDH++D +A  ME +E  +L +LG  +PY
Sbjct: 114 GTLHLLGYDHIEDGEAEEMEAIEIQVLLELGYPNPY 149


>gi|296447883|ref|ZP_06889794.1| protein of unknown function UPF0054 [Methylosinus trichosporium
           OB3b]
 gi|296254624|gb|EFH01740.1| protein of unknown function UPF0054 [Methylosinus trichosporium
           OB3b]
          Length = 168

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/158 (44%), Positives = 87/158 (55%), Gaps = 7/158 (4%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
            + I V    W  +  L  L +      V+   ++         ELS+ FTD   I  LN
Sbjct: 4   SIDIIVTAPCWEQQTGLDELTQSTVRGCVAVTAAR----LAQDCELSVNFTDDATIRELN 59

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
            ++RGIDKPTNVLSF            L LGDIV+A+E +  EA+  GK FE HL HLII
Sbjct: 60  AQWRGIDKPTNVLSF---ETPGPLARRLSLGDIVIAHETVAREADEQGKSFEAHLTHLII 116

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           HGFLHL+GYDH   ++A  ME LER I   LG+ DPYE
Sbjct: 117 HGFLHLIGYDHQAAREAEEMEALERRIAATLGLADPYE 154


>gi|138896065|ref|YP_001126518.1| putative metalloprotease [Geobacillus thermodenitrificans NG80-2]
 gi|196248958|ref|ZP_03147658.1| protein of unknown function UPF0054 [Geobacillus sp. G11MC16]
 gi|166228371|sp|A4IR19|RRMF_GEOTN RecName: Full=Probable rRNA maturation factor
 gi|134267578|gb|ABO67773.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211834|gb|EDY06593.1| protein of unknown function UPF0054 [Geobacillus sp. G11MC16]
          Length = 156

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 14/162 (8%)

Query: 11  LDLQI-AVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + +QI  ++         + TL +++   A    + +G        E+S+ F D+ RI  
Sbjct: 1   MTIQIDFIDETNEVTAEQIETLEQLIREAAAVENVPEG-------AEVSVSFVDNERIRV 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFE 123
           +N +YRG D PT+VLSF                   +LGDI+++    + +A   G  F 
Sbjct: 54  MNRDYRGKDAPTDVLSFALEEEGEGEIDIIGADVPPVLGDIIISIPKAKEQAAEYGHSFM 113

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L  L +HGFLHLLGYDH  +++  VM   +  IL   G+ 
Sbjct: 114 RELGFLAVHGFLHLLGYDHETEEEERVMFAKQEEILTRFGLT 155


>gi|167814343|ref|ZP_02446023.1| hypothetical protein Bpse9_04323 [Burkholderia pseudomallei 91]
 gi|167844394|ref|ZP_02469902.1| hypothetical protein BpseB_03824 [Burkholderia pseudomallei B7210]
 gi|167892907|ref|ZP_02480309.1| hypothetical protein Bpse7_04011 [Burkholderia pseudomallei 7894]
 gi|167909622|ref|ZP_02496713.1| hypothetical protein Bpse112_03959 [Burkholderia pseudomallei 112]
 gi|167917637|ref|ZP_02504728.1| hypothetical protein BpseBC_03726 [Burkholderia pseudomallei
           BCC215]
 gi|229269498|ref|YP_107301.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           pseudomallei K96243]
 gi|229335614|ref|YP_001065003.2| putative metalloprotease [Burkholderia pseudomallei 1106a]
 gi|254187673|ref|ZP_04894185.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196964|ref|ZP_04903388.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           S13]
 gi|254296215|ref|ZP_04963672.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           406e]
 gi|157806091|gb|EDO83261.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           406e]
 gi|157935353|gb|EDO91023.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169653707|gb|EDS86400.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           S13]
          Length = 270

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 121 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 172

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 173 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 228

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 229 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 270


>gi|312898796|ref|ZP_07758184.1| conserved hypothetical protein TIGR00043 [Megasphaera
           micronuciformis F0359]
 gi|310619958|gb|EFQ03530.1| conserved hypothetical protein TIGR00043 [Megasphaera
           micronuciformis F0359]
          Length = 157

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAY 108
           +   ELS+V  D+  I  LN  YR ID+PT+VLSF          DG  + +LGDIV++ 
Sbjct: 35  DEDAELSVVLCDNAYIHELNKTYRNIDRPTDVLSFALNEGEEEGYDGPDTKLLGDIVISL 94

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +    ++   G  FE  L +L +HG LH+LGYDH+ D+D   M   E  +L  LG 
Sbjct: 95  DKTREQSEEYGHSFERELAYLTVHGMLHILGYDHMTDEDKAEMRKEEEFVLHRLGF 150


>gi|229086872|ref|ZP_04219032.1| metalloprotease [Bacillus cereus Rock3-44]
 gi|228696447|gb|EEL49272.1| metalloprotease [Bacillus cereus Rock3-44]
          Length = 136

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI+ +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 16  EDGTELSVTFVDNERIQEINRDYRDKDQPTDVISFAMEDMGEGEMEIVGVEMPRMLGDLI 75

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ D+D   M G ++ ILE  G+
Sbjct: 76  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTDEDEKEMFGKQKEILEAFGL 134


>gi|228999095|ref|ZP_04158677.1| metalloprotease [Bacillus mycoides Rock3-17]
 gi|229006643|ref|ZP_04164277.1| metalloprotease [Bacillus mycoides Rock1-4]
 gi|228754504|gb|EEM03915.1| metalloprotease [Bacillus mycoides Rock1-4]
 gi|228760712|gb|EEM09676.1| metalloprotease [Bacillus mycoides Rock3-17]
          Length = 143

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI+ +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGTELSVTFVDNERIQEINRDYRDKDQPTDVISFAMEDMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ D+D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTDEDEKEMFGKQKEILEAFGL 141


>gi|119386401|ref|YP_917456.1| hypothetical protein Pden_3693 [Paracoccus denitrificans PD1222]
 gi|145558815|sp|A1B8B6|RRMF_PARDP RecName: Full=Probable rRNA maturation factor
 gi|119376996|gb|ABL71760.1| protein of unknown function UPF0054 [Paracoccus denitrificans
           PD1222]
          Length = 174

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/163 (39%), Positives = 86/163 (52%), Gaps = 15/163 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E+  W D   L  + E   A+AV   +    F      ++ ++  D  RI  LN 
Sbjct: 15  VDIVLEDDRWED-ADLPAMAERA-ARAVGEWLGLDAF------QVVVMGCDDARIAALNA 66

Query: 73  EYRGIDKPTNVLSFPTAFAS-------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           E+RG  KPTNVLS+P             +   +  LGDI ++Y+    EA   GK F +H
Sbjct: 67  EFRGKPKPTNVLSWPAVEFEAREPGAHPEPPGAEELGDIAISYDTCLREAEAQGKPFADH 126

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL++H  LHL GYDH+DD+DA  ME  ERSIL  LGI DPY
Sbjct: 127 ATHLLVHAMLHLAGYDHIDDEDAETMEDAERSILGKLGIPDPY 169


>gi|217420118|ref|ZP_03451624.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           576]
 gi|242316823|ref|ZP_04815839.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1106b]
 gi|52208729|emb|CAH34665.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|126226010|gb|ABN89550.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1106a]
 gi|217397422|gb|EEC37438.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           576]
 gi|242140062|gb|EES26464.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1106b]
          Length = 271

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 122 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 173

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 174 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 229

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 230 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 271


>gi|302333246|gb|ADL23439.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 155

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L +  + K + +L+  +K     E+  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVKDAWYKQIKDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFAL 71

Query: 89  AFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                D          +LGDI++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPDIDFSGFDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
            + D   M G + +IL   G+ 
Sbjct: 132 TEADEKEMFGRQDTILNAYGLT 153


>gi|134279773|ref|ZP_01766485.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           305]
 gi|254181743|ref|ZP_04888340.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1655]
 gi|134248973|gb|EBA49055.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           305]
 gi|184212281|gb|EDU09324.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1655]
          Length = 271

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 122 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 173

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 174 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 229

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 230 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 271


>gi|332993748|gb|AEF03803.1| hypothetical protein ambt_11410 [Alteromonas sp. SN2]
          Length = 155

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 4/152 (2%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           + A   DE   + +  +   +A +N +       E   E+++ FTD    +TLN EYRG 
Sbjct: 8   QQAYEADEGMAKAIPSLEQIEAWANAVLVAENTGEQ--EITVRFTDDEESQTLNHEYRGK 65

Query: 78  DKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           DKPTNVLSFP  F    G    +LGD+V+   +I  EA    K   NH  H+++HG LHL
Sbjct: 66  DKPTNVLSFP--FEVPPGIEMNLLGDLVICVPVIMREAEEQDKTPTNHYAHMVVHGILHL 123

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           LGYDH+DD DA +ME  E  IL  L I +PY+
Sbjct: 124 LGYDHIDDADADIMEAKEIRILASLNIGNPYQ 155


>gi|304320424|ref|YP_003854067.1| hypothetical protein PB2503_04252 [Parvularcula bermudensis
           HTCC2503]
 gi|303299326|gb|ADM08925.1| hypothetical protein PB2503_04252 [Parvularcula bermudensis
           HTCC2503]
          Length = 158

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/115 (47%), Positives = 70/115 (60%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++L  TD   ++ LN  +RG D PTNVLSFP    S+     L LGDI +AY +   EA 
Sbjct: 40  IALRLTDDTELQALNKSFRGKDTPTNVLSFPADPFSTPPGEDLFLGDIAIAYGVCAREAE 99

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
                 + HL HLI+HGFLHLLGYDH  D DA VME LE ++++ LG  +PY  D
Sbjct: 100 ARAFPLDRHLAHLILHGFLHLLGYDHQSDADAAVMEDLEATLMDRLGYGNPYAGD 154


>gi|169829170|ref|YP_001699328.1| hypothetical protein Bsph_3714 [Lysinibacillus sphaericus C3-41]
 gi|238688186|sp|B1HTJ4|RRMF_LYSSC RecName: Full=Probable rRNA maturation factor
 gi|168993658|gb|ACA41198.1| UPF0054 protein [Lysinibacillus sphaericus C3-41]
          Length = 157

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIV 105
           E   E+S+ F  +  I+ +N EYRG D+PT+V+SF                   +LGDI+
Sbjct: 36  EPETEVSVTFVTNDTIQDINREYRGKDQPTDVISFALEELGEGEMAVTFEGMPRVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++ +  + +A      FE  L  L +HGFLHLLGYDH++ ++  VM   +  IL+  G+
Sbjct: 96  ISTDRAKEQAEEYNHSFERELGFLAVHGFLHLLGYDHMEPEEEKVMFTKQDEILQTFGL 154


>gi|257065846|ref|YP_003152102.1| hypothetical protein Apre_0330 [Anaerococcus prevotii DSM 20548]
 gi|256797726|gb|ACV28381.1| protein of unknown function UPF0054 [Anaerococcus prevotii DSM
           20548]
          Length = 446

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +    + V  ++      ++   E+S+ F D   I  LN E+R +D+PT+VLSFP     
Sbjct: 16  DADLERTVKEVLKTEGLGED--YEVSITFVDREEIHRLNREFRDVDRPTDVLSFPLDDTI 73

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
               +  MLGDIV+  ++ + +A   G      +++L  H  LHLLGYDH+++ +   M 
Sbjct: 74  DLPDADKMLGDIVICLDVAKDQAMEFGHSLRREIMYLTCHSTLHLLGYDHMEEDEKREMR 133

Query: 153 GLERSILEDL 162
             E+ ++ +L
Sbjct: 134 RREKEVMRNL 143


>gi|148549866|ref|YP_001269968.1| putative metalloprotease [Pseudomonas putida F1]
 gi|167012965|sp|A5W9H4|RRMF_PSEP1 RecName: Full=Probable rRNA maturation factor
 gi|148513924|gb|ABQ80784.1| protein of unknown function UPF0054 [Pseudomonas putida F1]
 gi|313500768|gb|ADR62134.1| Putative metalloprotease [Pseudomonas putida BIRD-1]
          Length = 157

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LD+Q A + A   D   LR  CE+   +  ++             E+++   D      
Sbjct: 3   ELDIQRATDAATPEDAA-LRRWCELALRQRSAD------------SEMTIRLVDEAEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSFP A    +     +LGD+V+   ++E EA   GK  E H  HL
Sbjct: 50  LNHTYRHKDYATNVLSFP-ADVPDELLDIPLLGDLVICVAVVEREAAEQGKSLEAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D++A  ME LER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIEDEEAEEMESLERELLAELGHPDPYADD 150


>gi|53724679|ref|YP_102057.1| unkown domain/metalloprotease fusion protein [Burkholderia mallei
           ATCC 23344]
 gi|228969302|ref|YP_332300.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           pseudomallei 1710b]
 gi|229008326|ref|YP_994019.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           mallei SAVP1]
 gi|229027669|ref|YP_001081961.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           mallei NCTC 10247]
 gi|229780993|ref|YP_001028317.2| unkown domain/putative metalloprotease fusion protein [Burkholderia
           mallei NCTC 10229]
 gi|254208717|ref|ZP_04915065.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei JHU]
 gi|52428102|gb|AAU48695.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei ATCC
           23344]
 gi|147750593|gb|EDK57662.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei JHU]
          Length = 270

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F        ++ F  +    
Sbjct: 121 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIFSDTQF---TVRFVGADEGR 172

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 173 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 228

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 229 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 270


>gi|315497216|ref|YP_004086020.1| hypothetical protein Astex_0168 [Asticcacaulis excentricus CB 48]
 gi|315415228|gb|ADU11869.1| protein of unknown function UPF0054 [Asticcacaulis excentricus CB
           48]
          Length = 156

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I VE+  W + +        V   A+       Y   +  ++L ++ TD   ++ LN 
Sbjct: 8   IDIEVEHDNWTEALP---EVSAVVTGAIEATF--AYLGAKEQLDLVVLLTDDAEMKALNK 62

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           E+R  + PTNVLSFP             LGDI   +E    EA    K  + H+ HL +H
Sbjct: 63  EFRQKNAPTNVLSFPAP-----DMMHPHLGDIAFGFETCVREAKEQKKTLKAHVAHLSVH 117

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LHLLGYDH++D +A  ME LER IL  LGI DPY
Sbjct: 118 GALHLLGYDHINDPEAEEMEDLERKILHGLGIADPY 153


>gi|294676667|ref|YP_003577282.1| hypothetical protein RCAP_rcc01117 [Rhodobacter capsulatus SB 1003]
 gi|294475487|gb|ADE84875.1| protein of unknown function UPF0054 [Rhodobacter capsulatus SB
           1003]
          Length = 170

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 13/160 (8%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           +E   + +     ++ V+ ++     +     E+SL+  D  RI  LN E+RG   PTNV
Sbjct: 11  EEAAWQGIDLAGLSERVARIVLTDQELDPEAWEISLIGCDDARIADLNAEFRGKPTPTNV 70

Query: 84  LSFPTAFASSDGCSSLM-------------LGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           LS+P    +++                   LGDI ++Y+    EA   GK   +H+ HL+
Sbjct: 71  LSWPAQDLAAEDDGEEPYFPEPFVPGERDSLGDIAISYQTCLREAEAAGKSVHDHVTHLV 130

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           IHG LHLLGYDH+ D DA +ME +E  IL  LGI +PYE+
Sbjct: 131 IHGVLHLLGYDHIRDADAQLMESIEVRILAALGIANPYEI 170


>gi|228993045|ref|ZP_04152968.1| metalloprotease [Bacillus pseudomycoides DSM 12442]
 gi|228766693|gb|EEM15333.1| metalloprotease [Bacillus pseudomycoides DSM 12442]
          Length = 143

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI+ +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGTELSVTFVDNERIQEINRDYRDKDQPTDVISFAMEDMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ D+D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTDEDEQEMFGKQKEILEAFGL 141


>gi|238562536|ref|ZP_00440243.2| putative conserved hypothetical protein [Burkholderia mallei GB8
           horse 4]
 gi|251767812|ref|ZP_02268483.2| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           PRL-20]
 gi|254177000|ref|ZP_04883657.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei ATCC
           10399]
 gi|254203741|ref|ZP_04910101.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei FMH]
 gi|254260739|ref|ZP_04951793.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1710a]
 gi|254360231|ref|ZP_04976501.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           2002721280]
 gi|76578267|gb|ABA47742.1| conserved hypothetical protein TIGR00043, putative [Burkholderia
           pseudomallei 1710b]
 gi|121228785|gb|ABM51303.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           SAVP1]
 gi|124294661|gb|ABN03930.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei NCTC
           10229]
 gi|126243959|gb|ABO07052.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei NCTC
           10247]
 gi|147745253|gb|EDK52333.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei FMH]
 gi|148029471|gb|EDK87376.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           2002721280]
 gi|160698041|gb|EDP88011.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei ATCC
           10399]
 gi|238522405|gb|EEP85849.1| putative conserved hypothetical protein [Burkholderia mallei GB8
           horse 4]
 gi|243061633|gb|EES43819.1| conserved hypothetical protein TIGR00043 [Burkholderia mallei
           PRL-20]
 gi|254219428|gb|EET08812.1| conserved hypothetical protein TIGR00043 [Burkholderia pseudomallei
           1710a]
          Length = 271

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F        ++ F  +    
Sbjct: 122 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIFSDTQF---TVRFVGADEGR 173

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 174 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 229

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 230 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 271


>gi|254467206|ref|ZP_05080617.1| conserved hypothetical protein TIGR00043 [Rhodobacterales bacterium
           Y4I]
 gi|206688114|gb|EDZ48596.1| conserved hypothetical protein TIGR00043 [Rhodobacterales bacterium
           Y4I]
          Length = 170

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/173 (35%), Positives = 87/173 (50%), Gaps = 18/173 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L I +E+A W  +  L  L E          +   + +   + E+SL+  D   I  L
Sbjct: 1   MTLDITIEDARW-QQAGLEPLAEEA-----VAAVLAHFGLDAEMCEISLLGCDDAEIAGL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R    PTNVLS+P                  D    + LGDI ++Y     EA+  
Sbjct: 55  NAEFREKPVPTNVLSWPAEERAADTDGGTPVPPEPDFTGEIPLGDIAISYGTCAREASEA 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           G+   +H  HLI+HG LHLLGYDH+ D+DA +MEG+E  IL  +GI +PY V+
Sbjct: 115 GRTLADHARHLIVHGTLHLLGYDHIRDRDAALMEGIEVLILGKMGIANPYIVE 167


>gi|56421026|ref|YP_148344.1| putative metalloprotease [Geobacillus kaustophilus HTA426]
 gi|261418491|ref|YP_003252173.1| metalloprotease [Geobacillus sp. Y412MC61]
 gi|297529343|ref|YP_003670618.1| hypothetical protein GC56T3_0999 [Geobacillus sp. C56-T3]
 gi|319767548|ref|YP_004133049.1| hypothetical protein GYMC52_2525 [Geobacillus sp. Y412MC52]
 gi|59799076|sp|Q5KX10|RRMF_GEOKA RecName: Full=Probable rRNA maturation factor
 gi|56380868|dbj|BAD76776.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
 gi|261374948|gb|ACX77691.1| protein of unknown function UPF0054 [Geobacillus sp. Y412MC61]
 gi|297252595|gb|ADI26041.1| protein of unknown function UPF0054 [Geobacillus sp. C56-T3]
 gi|317112414|gb|ADU94906.1| protein of unknown function UPF0054 [Geobacillus sp. Y412MC52]
          Length = 156

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 40  VSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---- 93
           +  L+++   ++   +  E+S+ F D+ RI  +N +YRG D PT+VLSF           
Sbjct: 22  IERLLAEAAALENVPDGAEVSVTFVDNERIRAMNRDYRGKDAPTDVLSFALEEEGEEEVH 81

Query: 94  --DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                   +LGDIV++    + +A   G  F   L  L +HGFLHLLGYDH  +++  VM
Sbjct: 82  IVGADMPPVLGDIVISIPKAKEQAAAYGHSFMRELGFLAVHGFLHLLGYDHGTEEEERVM 141

Query: 152 EGLERSILEDLGIN 165
              +  IL   G+ 
Sbjct: 142 FAKQEDILARFGLT 155


>gi|299535808|ref|ZP_07049129.1| hypothetical protein BFZC1_07283 [Lysinibacillus fusiformis ZC1]
 gi|298729008|gb|EFI69562.1| hypothetical protein BFZC1_07283 [Lysinibacillus fusiformis ZC1]
          Length = 157

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E   E+S+ F  +  I+ +N EYRG D+PT+V+SF                   +LGDI+
Sbjct: 36  EPETEVSVTFVTNKAIQDINREYRGKDQPTDVISFALEELGQGEMEVIFEGMPRVLGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++ +  + +A      FE  L  L +HGFLHLLGYDH+  ++  VM   +  IL+  G+
Sbjct: 96  ISTDRAKEQAEEYNHSFERELGFLAVHGFLHLLGYDHMKPEEEKVMFAKQDEILQTYGL 154


>gi|261253664|ref|ZP_05946237.1| predicted metal-dependent hydrolase [Vibrio orientalis CIP 102891]
 gi|260937055|gb|EEX93044.1| predicted metal-dependent hydrolase [Vibrio orientalis CIP 102891]
          Length = 110

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D      LN +YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  
Sbjct: 2   DEKESHQLNHDYRGKDKPTNVLSFP--FEAPPGIEIDLLGDLIICRQVVEREAIEQNKPL 59

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             H  H+++HG LHLLGYDH++D +A  ME LE  I++ +G NDPY  +
Sbjct: 60  MAHWAHMVVHGSLHLLGYDHIEDDEAEKMESLETEIMQRMGFNDPYIDE 108


>gi|313114170|ref|ZP_07799722.1| conserved hypothetical protein TIGR00043 [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310623579|gb|EFQ06982.1| conserved hypothetical protein TIGR00043 [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 163

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + + +   ++  +A + ++   +F  E   E+S+ F D+  I  LN +YR    PT+VLS
Sbjct: 14  VKVPSGLRILIRRACNAVLEYEHF--EAPAEISVTFVDNAAIAELNNQYRNKPMPTDVLS 71

Query: 86  FPTA----FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP      +   +     MLGDIV++ E  + +AN+ G   +  +  L +H  LHLLGYD
Sbjct: 72  FPLGVNGKYDVDENNGCKMLGDIVISMERAQEQANLYGHPLQREVAFLTVHSMLHLLGYD 131

Query: 142 HVDDK-DACVMEGLERSILEDLGIN 165
           H +   +A  M   E ++L  LG+ 
Sbjct: 132 HENGGLEAMRMREKEEAVLLQLGLP 156


>gi|91775004|ref|YP_544760.1| hypothetical protein Mfla_0649 [Methylobacillus flagellatus KT]
 gi|122400164|sp|Q1H3L8|RRMF_METFK RecName: Full=Probable rRNA maturation factor
 gi|91708991|gb|ABE48919.1| protein of unknown function UPF0054 [Methylobacillus flagellatus
           KT]
          Length = 149

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 23/166 (13%)

Query: 8   LPR--LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +PR  +++Q A E     +E   R                          E +L   D  
Sbjct: 1   MPRLAMNVQYASEWDSLPNEKQFRKWARAALRV---------------DTEATLRIVDEE 45

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN +YRG D  TNVL+FP            ++GDI+L   ++  EA       E+H
Sbjct: 46  EGRMLNRDYRGKDYATNVLTFPLEE------EPWLVGDIILCAPVVAREAAEQNITLESH 99

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             HL +HG LH+ GYDH D+  A +ME +E   +  LG  DPY  +
Sbjct: 100 YAHLTVHGILHMHGYDHEDEHQAELMESIESFTMIQLGYPDPYSSE 145


>gi|54310005|ref|YP_131025.1| putative metalloprotease [Photobacterium profundum SS9]
 gi|59799114|sp|Q6LNA3|RRMF_PHOPR RecName: Full=Probable rRNA maturation factor
 gi|46914444|emb|CAG21223.1| Putative predicted metal dependent hydrolase [Photobacterium
           profundum SS9]
          Length = 154

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 15/162 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ A EN      E   +   E                + ++  E+++   D    + 
Sbjct: 5   LDLQYATENQEGLPSEDKFQQWFEAAVT------------LFQSDAEITIRIVDVKESQA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++EIEA    K    H  H+
Sbjct: 53  LNLEYRGKDKPTNVLSFP--FEAPPGIELDLLGDLIICRQVVEIEAKEQDKPLNAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D++A  ME LE  I+E +G  DP+  +
Sbjct: 111 VVHGTLHLLGYDHIEDEEAEEMEYLETEIIEKMGFADPFAAE 152


>gi|21283251|ref|NP_646339.1| hypothetical protein MW1522 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486405|ref|YP_043626.1| hypothetical protein SAS1508 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|253733180|ref|ZP_04867345.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|300911792|ref|ZP_07129235.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|26006922|sp|Q8NWB4|RRMF_STAAW RecName: Full=Probable rRNA maturation factor
 gi|56749708|sp|Q6G8Z7|RRMF_STAAS RecName: Full=Probable rRNA maturation factor
 gi|21204691|dbj|BAB95387.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244848|emb|CAG43309.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|253728720|gb|EES97449.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|300886038|gb|EFK81240.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 155

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L +  + K + +L+  +K     E+  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFAL 71

Query: 89  AFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                +          +LGDI++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPEIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
            + D   M G + +IL   G+ 
Sbjct: 132 TEADEKEMFGRQDTILNAYGLT 153


>gi|319651597|ref|ZP_08005724.1| hypothetical protein HMPREF1013_02336 [Bacillus sp. 2_A_57_CT2]
 gi|317396664|gb|EFV77375.1| hypothetical protein HMPREF1013_02336 [Bacillus sp. 2_A_57_CT2]
          Length = 156

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 7/153 (4%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  + DE +     ++   + + N  +    V E   E+S+ F  + RI  +N EYR  D
Sbjct: 4   NIDFLDETNELQENDIAKIEELINFAASKESV-EPESEVSITFVTNERIREINREYRDKD 62

Query: 79  KPTNVLSFPTAFASSD------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +PT+V+SF                   +LGDI+++    + +A   G  F   L  L +H
Sbjct: 63  RPTDVISFAMEELGEGEIELIGADMPRVLGDIIISVAKAKEQAEEYGHSFIRELGFLAVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLHLLGYDH + +D   M   ++ IL++ G+ 
Sbjct: 123 GFLHLLGYDHENPEDEKKMFSRQKDILDEFGLT 155


>gi|24372762|ref|NP_716804.1| putative metalloprotease [Shewanella oneidensis MR-1]
 gi|29428198|sp|Q8EHN9|RRMF_SHEON RecName: Full=Probable rRNA maturation factor
 gi|24346837|gb|AAN54249.1|AE015561_9 conserved hypothetical protein TIGR00043 [Shewanella oneidensis
           MR-1]
          Length = 153

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+Q A  +     E  L    +     ++               EL++   D+   + L
Sbjct: 7   LDVQYATTSDYLPSEEQLALWVKTAIGNSM------------KQAELTIRIVDARESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NGTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICASVVENEAREQDKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTDPYK 151


>gi|239827762|ref|YP_002950386.1| metalloprotease [Geobacillus sp. WCH70]
 gi|259646848|sp|C5D4S8|RRMF_GEOSW RecName: Full=Probable rRNA maturation factor
 gi|239808055|gb|ACS25120.1| protein of unknown function UPF0054 [Geobacillus sp. WCH70]
          Length = 156

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 7/153 (4%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  + DE +  T  ++   + + N  ++   V  +  E+ + F D+ RI  +N +YRG D
Sbjct: 4   NIDFIDETNEVTKEQMNIIEQLLNYAAEIEHV-PSGAEVGISFVDNERIRIINRDYRGKD 62

Query: 79  KPTNVLSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +PT+V+SF                   +LGDI+++    + +A   G  F   L  L +H
Sbjct: 63  QPTDVISFALEEKGEGEVEIVDADIPPLLGDIIISIPKAKEQAKEYGHSFMRELGFLAVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLHLLGYDH  +++  +M   ++ ILE  G+ 
Sbjct: 123 GFLHLLGYDHKTEEEEKIMFSKQKDILERYGLT 155


>gi|295100850|emb|CBK98395.1| conserved hypothetical protein TIGR00043 [Faecalibacterium
           prausnitzii L2-6]
          Length = 163

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           I + +   ++  +A + ++   +F  ++  E+S+ F D+  I  LN +YR    PT+VLS
Sbjct: 14  IKVPSGLRILIRRACNAVLEYEHF--DDPAEISVTFVDNAAIAELNNQYRNKPMPTDVLS 71

Query: 86  FPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP          +     MLGDIV++ E  + +A + G   +  +  L +H  LHLLGYD
Sbjct: 72  FPLGENGVYDVDENNGCKMLGDIVISMERAQEQATLYGHPLQREVAFLTVHSMLHLLGYD 131

Query: 142 HVDDK-DACVMEGLERSILEDLGIN 165
           H +   +A  M   E ++L  LG+ 
Sbjct: 132 HENGGLEAMRMREKEEAVLTQLGLP 156


>gi|49483818|ref|YP_041042.1| hypothetical protein SAR1647 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82751173|ref|YP_416914.1| hypothetical protein SAB1442c [Staphylococcus aureus RF122]
 gi|257425695|ref|ZP_05602119.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428356|ref|ZP_05604754.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430993|ref|ZP_05607373.1| metalloprotease [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433681|ref|ZP_05610039.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436595|ref|ZP_05612639.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|258423998|ref|ZP_05686880.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|282904152|ref|ZP_06312040.1| putative metalloprotease [Staphylococcus aureus subsp. aureus C160]
 gi|282905979|ref|ZP_06313834.1| metalloprotease [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908889|ref|ZP_06316707.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911208|ref|ZP_06319010.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914377|ref|ZP_06322163.1| putative metalloprotease [Staphylococcus aureus subsp. aureus M899]
 gi|282916840|ref|ZP_06324598.1| metalloprotease [Staphylococcus aureus subsp. aureus D139]
 gi|282919346|ref|ZP_06327081.1| metalloprotease [Staphylococcus aureus subsp. aureus C427]
 gi|282924671|ref|ZP_06332339.1| metalloprotease [Staphylococcus aureus subsp. aureus C101]
 gi|283770646|ref|ZP_06343538.1| metalloprotease [Staphylococcus aureus subsp. aureus H19]
 gi|283958334|ref|ZP_06375785.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503451|ref|ZP_06667298.1| metalloprotease [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510468|ref|ZP_06669174.1| metalloprotease [Staphylococcus aureus subsp. aureus M809]
 gi|293531008|ref|ZP_06671690.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295428148|ref|ZP_06820780.1| metalloprotease [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590886|ref|ZP_06949524.1| hypothetical metal-binding protein [Staphylococcus aureus subsp.
           aureus MN8]
 gi|56749737|sp|Q6GGD0|RRMF_STAAR RecName: Full=Probable rRNA maturation factor
 gi|123547820|sp|Q2YT09|RRMF_STAAB RecName: Full=Probable rRNA maturation factor
 gi|49241947|emb|CAG40642.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82656704|emb|CAI81131.1| conserved hypothetical UPF0054 protein [Staphylococcus aureus
           RF122]
 gi|257271389|gb|EEV03535.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275197|gb|EEV06684.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278423|gb|EEV09059.1| metalloprotease [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281774|gb|EEV11911.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283946|gb|EEV14069.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257845619|gb|EEV69651.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|282313506|gb|EFB43901.1| metalloprotease [Staphylococcus aureus subsp. aureus C101]
 gi|282317156|gb|EFB47530.1| metalloprotease [Staphylococcus aureus subsp. aureus C427]
 gi|282319327|gb|EFB49679.1| metalloprotease [Staphylococcus aureus subsp. aureus D139]
 gi|282321558|gb|EFB51883.1| putative metalloprotease [Staphylococcus aureus subsp. aureus M899]
 gi|282324903|gb|EFB55213.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327153|gb|EFB57448.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331271|gb|EFB60785.1| metalloprotease [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595770|gb|EFC00734.1| putative metalloprotease [Staphylococcus aureus subsp. aureus C160]
 gi|283460793|gb|EFC07883.1| metalloprotease [Staphylococcus aureus subsp. aureus H19]
 gi|283470848|emb|CAQ50059.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283790483|gb|EFC29300.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920276|gb|EFD97342.1| putative metalloprotease [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291095117|gb|EFE25382.1| metalloprotease [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466832|gb|EFF09352.1| metalloprotease [Staphylococcus aureus subsp. aureus M809]
 gi|295128506|gb|EFG58140.1| metalloprotease [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575772|gb|EFH94488.1| hypothetical metal-binding protein [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298694852|gb|ADI98074.1| conserved hypothetical UPF0054 protein [Staphylococcus aureus
           subsp. aureus ED133]
 gi|312437961|gb|ADQ77032.1| hypothetical metal-binding protein [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315195473|gb|EFU25860.1| hypothetical protein CGSSa00_07380 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 155

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L +  + K + +L+  +K     E+  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFAL 71

Query: 89  AFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                D          +LGDI++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPDIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
            + D   M G + +IL   G+ 
Sbjct: 132 TEADEKEMFGRQDTILNAYGLT 153


>gi|117924738|ref|YP_865355.1| hypothetical protein Mmc1_1438 [Magnetococcus sp. MC-1]
 gi|145572756|sp|A0L7K6|RRMF_MAGSM RecName: Full=Probable rRNA maturation factor
 gi|117608494|gb|ABK43949.1| protein of unknown function UPF0054 [Magnetococcus sp. MC-1]
          Length = 147

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------ 97
            S  +      +E+S++ +D   ++ LN +YRG DKPTN+LSF     + D         
Sbjct: 14  ASPAFGWALAPLEVSVLLSDDEAVQALNAQYRGKDKPTNILSFAMEEEADDAMPMPIMAG 73

Query: 98  -SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLE 155
              +LGD++LAY+ ++ EA    K F+ HL HL++HG LHLLGYDH   + +A   E  E
Sbjct: 74  EPRLLGDLILAYQTVQREAAEQDKPFDQHLTHLLVHGTLHLLGYDHERSEDEAQQQEARE 133

Query: 156 RSILEDLGINDPY 168
            +IL  LG+ +PY
Sbjct: 134 IAILAQLGLPNPY 146


>gi|149926994|ref|ZP_01915252.1| hypothetical protein LMED105_09072 [Limnobacter sp. MED105]
 gi|149824215|gb|EDM83435.1| hypothetical protein LMED105_09072 [Limnobacter sp. MED105]
          Length = 165

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +A++ A+  D      +      +      +K  F+  +  ++++        + LN ++
Sbjct: 11  VAIQWAMQADHPPFSEVDNSRIRRW-----AKACFM--DRADITIRMVGEEEGQQLNRDF 63

Query: 75  RGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           RG D  TNVL+FP       +D    + + DIV+   ++E EA   GK+  +HL HLI+H
Sbjct: 64  RGKDYATNVLTFPMDMPDLGADSGLPVFMADIVICPAVVEREALEQGKDPIDHLAHLIVH 123

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LH  GY H  D  A +ME  E  IL+   I++PY
Sbjct: 124 GCLHAQGYVHESDNQAELMENREIEILKRFKISNPY 159


>gi|314936309|ref|ZP_07843656.1| putative metalloprotease [Staphylococcus hominis subsp. hominis
           C80]
 gi|313654928|gb|EFS18673.1| putative metalloprotease [Staphylococcus hominis subsp. hominis
           C80]
          Length = 153

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 8/148 (5%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKP 80
           I       +V  K    +     F KE        ELS+ F D   I+ +N  YR  DK 
Sbjct: 4   IDFNDHTNLVKDKWYHQIEDLINFAKEKENIHEDAELSVTFVDKDEIQEINKNYRDKDKV 63

Query: 81  TNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           T+V+SF       D        +LGDI++  ++ + +A      FE  L  L +HGFLHL
Sbjct: 64  TDVISFALEEDEPDIIGLDIPRVLGDIIICTDVAKEQAESYNHSFERELGFLALHGFLHL 123

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH++++D   M G ++ IL   G+ 
Sbjct: 124 LGYDHMNEEDEKEMFGRQKEILNAYGLT 151


>gi|160872543|ref|ZP_02062675.1| conserved hypothetical protein [Rickettsiella grylli]
 gi|159121342|gb|EDP46680.1| conserved hypothetical protein [Rickettsiella grylli]
          Length = 157

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/170 (33%), Positives = 74/170 (43%), Gaps = 16/170 (9%)

Query: 1   MSVKKVNLPRLD--LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           M   K+N  R+   LQI V N+       L+       +    N I            ++
Sbjct: 1   MHKTKINEKRIKITLQIRVRNSFIPSRYFLKRWVHTALSGQTENNI------------VN 48

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           +          LN  YR     TN+LSFP  F      +S  LGD+VL    I  EA   
Sbjct: 49  IRLVTQKESAKLNTLYRHKKGATNILSFP--FEPPPQVTSPFLGDLVLCATHINQEAKQQ 106

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K    H  HLIIHG LHL+GYDH    +A  ME LE  +L++LG  +PY
Sbjct: 107 QKTRLAHWAHLIIHGCLHLIGYDHAHRHEAVKMETLEIQLLKELGYENPY 156


>gi|167568853|ref|ZP_02361727.1| hypothetical protein BoklC_03336 [Burkholderia oklahomensis C6786]
          Length = 262

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDE+       +   K ++  +    F   +  + ++ F  +    
Sbjct: 113 PELDLAV-----QYGDEVGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 164

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 165 ALNNSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 220

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY 
Sbjct: 221 LLVHGALHAQGYDHERGDEDAAEMEALEIDILAKLGFPNPYR 262


>gi|295687477|ref|YP_003591170.1| hypothetical protein Cseg_0020 [Caulobacter segnis ATCC 21756]
 gi|295429380|gb|ADG08552.1| protein of unknown function UPF0054 [Caulobacter segnis ATCC 21756]
          Length = 157

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 10/161 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E+  W          E +  +A   ++     ++     + ++ T+   ++ L
Sbjct: 3   ITVDIEIEDEAWTKAAE---DAEALVWRAAQAVLDAHEDIEGQG--IVILLTNDDTVQGL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++R  D  TNVLSFP+             GDI LAY +   EA   GK   +HL HL+
Sbjct: 58  NRDFRQKDYATNVLSFPSPPNPEGQI-----GDIALAYGVCAREAEEQGKPLAHHLQHLV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            HG LHLLGYDH  D +A  ME LER IL  L + DPY  D
Sbjct: 113 AHGVLHLLGYDHESDDEAEAMEALEREILAGLDVPDPYASD 153


>gi|229543817|ref|ZP_04432876.1| protein of unknown function UPF0054 [Bacillus coagulans 36D1]
 gi|229324956|gb|EEN90632.1| protein of unknown function UPF0054 [Bacillus coagulans 36D1]
          Length = 156

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE +      +   + + +  ++   V E+  ELS+ FTD+  I  +N +YRG D+PT+V
Sbjct: 9   DETNELEAEHLELVRTLLDYAARQEGV-EDGTELSVTFTDNEGIREINRDYRGKDQPTDV 67

Query: 84  LSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           +SF                   +LGDI+++      +A   G  FE  L  L +HGFLHL
Sbjct: 68  ISFALEEMGEGEIEITGAEIPRVLGDIIISVPRAREQAEEYGHSFERELGFLAVHGFLHL 127

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH+  +D   M G +  IL+  G+ 
Sbjct: 128 LGYDHMTKEDETEMFGRQNEILDRYGLK 155


>gi|126652812|ref|ZP_01724957.1| hypothetical protein BB14905_09040 [Bacillus sp. B14905]
 gi|126590348|gb|EAZ84468.1| hypothetical protein BB14905_09040 [Bacillus sp. B14905]
          Length = 157

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIV 105
           E   E+S+ F  +  I+ +N EYRG D+PT+V+SF                   +LGDI+
Sbjct: 36  EPETEVSVTFVTNDTIQDINREYRGKDQPTDVISFALEELGEGEMTVTFEGMPRILGDII 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++ +  + +A      FE  L  L +HGFLHLLGYDH++ ++  VM   +  IL+  G+
Sbjct: 96  ISTDRAKEQAEEYNHSFERELGFLAVHGFLHLLGYDHMEPEEEKVMFTKQDEILQTFGL 154


>gi|297207711|ref|ZP_06924146.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|296887728|gb|EFH26626.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
          Length = 155

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L +  + K + +L+  +K     E+  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFAL 71

Query: 89  AFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                +          +LGDI++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDVPEIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
            + D   M G + +IL   G+ 
Sbjct: 132 TEADEKEMFGRQDTILNAYGLT 153


>gi|198282886|ref|YP_002219207.1| hypothetical protein Lferr_0750 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198247407|gb|ACH83000.1| protein of unknown function UPF0054 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 165

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 2/161 (1%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + RL L++AV++ +    +  R        +A+S   S      + I ELSL F     +
Sbjct: 1   MSRLYLRMAVDDVVAAMPLPPRGEVRRSILQALSA-PSARVSADDRIRELSLTFVGDAEM 59

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN  YR    PTN LSFP   A        +LGDIV+A  ++  EA   GK   +H  
Sbjct: 60  AALNEGYRHKAAPTNCLSFPQD-ALPVLFRRDLLGDIVIAPAVVGREAAAQGKSLRDHYR 118

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HL+IH  LHLLGYDH    DA  ME LE  +L ++G+ DPY
Sbjct: 119 HLLIHSTLHLLGYDHELAADAQEMEALETRLLAEMGVADPY 159


>gi|269469147|gb|EEZ80692.1| hypothetical protein Sup05_0085 [uncultured SUP05 cluster
           bacterium]
          Length = 146

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           + +   EL +       I+ LN  YR  D+PTNVLSFP+          ++LGDIV+   
Sbjct: 29  LGKGKSELLIRIVGKVEIQNLNKTYRDKDQPTNVLSFPSDL--PIEIDEMILGDIVICTS 86

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           I+  EA +  K FE+HL+H+ IHG LHLLGYDHV+  DA  ME LE  ILE + IN+PYE
Sbjct: 87  IVANEAKLQNKTFEHHLIHMAIHGTLHLLGYDHVEPMDAQKMESLEIKILEKMQINNPYE 146


>gi|254671437|emb|CBA08953.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 251

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA      +L +  E  F +   + +  GY       ++S
Sbjct: 83  RAKKYPFLTLQRQRFHLNFENA--SSAANLPS--EHDFYRWAWSALKSGY----RRADIS 134

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF      +  C  S  + GD+++  +++  EA 
Sbjct: 135 LILLDEEAARAYNRDYRGKDYATNVLSFALNEGETLPCQVSEKLYGDLIICPQVVLKEAA 194

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY  D
Sbjct: 195 EQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMRAAGYPNPYRED 249


>gi|257439766|ref|ZP_05615521.1| putative metalloprotease [Faecalibacterium prausnitzii A2-165]
 gi|257197786|gb|EEU96070.1| putative metalloprotease [Faecalibacterium prausnitzii A2-165]
          Length = 163

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 7/145 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + + +   ++  +A + ++   +F  +   E+S+ F D+  I  LN +YR    PT+VLS
Sbjct: 14  VKVPSGLRILIRRACNAVLEYEHF--DEPAEISVTFVDNAAIAELNNQYRNKPMPTDVLS 71

Query: 86  FPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP          +     MLGDIV++ E  + +A + G   +  +  L +H  LHLLGYD
Sbjct: 72  FPLGENGVYDVDENNGCKMLGDIVISMERAQEQATLYGHPLQREVAFLTVHSMLHLLGYD 131

Query: 142 HVDDK-DACVMEGLERSILEDLGIN 165
           H +   +A  M   E ++L  LG+ 
Sbjct: 132 HENGGLEAMRMREKEEAVLTQLGLP 156


>gi|330960149|gb|EGH60409.1| metal-binding heat shock protein [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 166

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ+A E      E  LR  CE+   +  ++             EL++   D      
Sbjct: 3   ELDLQVASETPA-PREDQLRLWCEMGLRQRSAD------------SELTIRLVDETEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKDYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKLIDAHWAHM 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHLDDEEAEEMEALERTLLEELGYPDPYADD 150


>gi|16124310|ref|NP_418874.1| hypothetical protein CC_0054 [Caulobacter crescentus CB15]
 gi|221232991|ref|YP_002515427.1| metal-dependent hydrolase [Caulobacter crescentus NA1000]
 gi|26006909|sp|Q9AC14|RRMF_CAUCR RecName: Full=Probable rRNA maturation factor
 gi|254799469|sp|B8GX09|RRMF_CAUCN RecName: Full=Probable rRNA maturation factor
 gi|13421148|gb|AAK22042.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220962163|gb|ACL93519.1| predicted metal-dependent hydrolase [Caulobacter crescentus NA1000]
          Length = 157

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 10/161 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I +E+  W          E +  +A   ++     ++     + ++ TD   ++ L
Sbjct: 3   ITVDIEIEDEAW---TTAEADAEALVWRAAQAVLDAHEDIEGQG--IVILLTDDDSVQAL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++R  D  TNVLSFP+             GDI LAY +   EA   GK   +HL HL+
Sbjct: 58  NRDFRKKDYATNVLSFPSPPNPEGQI-----GDIALAYGVCAREAAEQGKPLAHHLQHLV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            HG LHLLGYDH  D +A  ME LER IL  L + DPY  D
Sbjct: 113 AHGVLHLLGYDHERDDEAEAMEALEREILAGLDVPDPYASD 153


>gi|257140192|ref|ZP_05588454.1| unkown domain/putative metalloprotease fusion protein [Burkholderia
           thailandensis E264]
          Length = 265

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 116 PELDLAV-----QYGDEIGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 167

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 168 TLNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 223

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 224 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 265


>gi|90414092|ref|ZP_01222075.1| hypothetical protein P3TCK_25855 [Photobacterium profundum 3TCK]
 gi|90324887|gb|EAS41415.1| hypothetical protein P3TCK_25855 [Photobacterium profundum 3TCK]
          Length = 154

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 15/162 (9%)

Query: 11  LDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           LDLQ A EN      E   +   E                + ++  E+++   D    + 
Sbjct: 5   LDLQYATENQEGLPSEDEFQQWFEAAVT------------LFQSDAEITIRIVDVKESQA 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYRG DKPTNVLSFP  F +  G    +LGD+++  +++EIEA    K    H  H+
Sbjct: 53  LNLEYRGKDKPTNVLSFP--FETPPGIELDLLGDLIICRQVVEIEAKEQDKPLNAHWAHM 110

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D++A  ME LE  I+E +G  DP+  +
Sbjct: 111 VVHGTLHLLGYDHIEDEEAEEMESLETEIIEKMGFADPFAAE 152


>gi|307822346|ref|ZP_07652578.1| protein of unknown function UPF0054 [Methylobacter tundripaludum
           SV96]
 gi|307736912|gb|EFO07757.1| protein of unknown function UPF0054 [Methylobacter tundripaludum
           SV96]
          Length = 153

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++Q   E+A   D+  ++   +                      E+ +   D      L
Sbjct: 4   IEIQAVFESAGQPDQQQIQLWVDTALD------------DYGQDTEIVVRIVDEQESAEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YR    PTN+LSFP      +G    +LGD+V+   ++E EA    K   +H  H+I
Sbjct: 52  NEQYRHKSGPTNILSFPV--DVPEGIELDLLGDLVICAPVVEKEALEQDKLLAHHWAHII 109

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH+DD +A +ME  E +IL  L IN+PY
Sbjct: 110 VHGVLHLLGYDHIDDDEAELMENKEIAILNKLHINNPY 147


>gi|86747718|ref|YP_484214.1| hypothetical protein RPB_0592 [Rhodopseudomonas palustris HaA2]
 gi|123004691|sp|Q2J2K7|RRMF_RHOP2 RecName: Full=Probable rRNA maturation factor
 gi|86570746|gb|ABD05303.1| Protein of unknown function UPF0054 [Rhodopseudomonas palustris
           HaA2]
          Length = 195

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/163 (39%), Positives = 84/163 (51%), Gaps = 11/163 (6%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ +    W  E       E    +A+    +          EL+++ TD   I  LN  
Sbjct: 33  EVVIAADCWRSEAS----AEATVLRAIEAA-AAMVDADTGEAELAVMLTDDDGIRALNAS 87

Query: 74  YRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           YRG DKPTNVLSFP       G       +  +LGDI +AY+ +  EA+  GK F++HL 
Sbjct: 88  YRGQDKPTNVLSFPAPQPDYQGAAQGSDVAPKLLGDIAIAYQTVRREADDEGKRFDHHLS 147

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           HL +HGFLHL+GYDH  D +A  ME  ER IL  LGI DPY  
Sbjct: 148 HLAVHGFLHLVGYDHETDAEAETMEAAERRILAGLGIPDPYAD 190


>gi|146279876|ref|YP_001170034.1| hypothetical protein Rsph17025_3874 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145558117|gb|ABP72729.1| hypothetical protein Rsph17025_3874 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 167

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 61/169 (36%), Positives = 82/169 (48%), Gaps = 19/169 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +   +E+  W +E+ L  L         + L  +          L ++  D  RI  LN 
Sbjct: 5   VDTVIEDGRW-EELDLPALATRAAEATFAGLDLRPEGFI-----LVVMGCDDARIAELNG 58

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCS-------------SLMLGDIVLAYEIIEIEANVLG 119
            +R   KPTNVLS+P+   +SD                   LGDI +AYE    EA   G
Sbjct: 59  TFRQKGKPTNVLSWPSEERASDEAGVAPEPPEPGEPEDPEHLGDIAIAYETCAREAAEQG 118

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           K   +H+ HL++HG LHLLGYDHVD+ DA +ME  E  IL  LG+ DPY
Sbjct: 119 KPVPDHVTHLLVHGILHLLGYDHVDEADADLMEATETRILAGLGVPDPY 167


>gi|15924560|ref|NP_372094.1| hypothetical protein SAV1570 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927150|ref|NP_374683.1| hypothetical protein SA1399 [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651963|ref|YP_186467.1| hypothetical protein SACOL1627 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160129|ref|YP_494225.1| hypothetical protein SAUSA300_1530 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195379|ref|YP_500183.1| hypothetical protein SAOUHSC_01672 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268054|ref|YP_001246997.1| hypothetical protein SaurJH9_1628 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394122|ref|YP_001316797.1| hypothetical protein SaurJH1_1662 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221685|ref|YP_001332507.1| hypothetical protein NWMN_1473 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156979888|ref|YP_001442147.1| hypothetical protein SAHV_1557 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509798|ref|YP_001575457.1| hypothetical protein USA300HOU_1571 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221140010|ref|ZP_03564503.1| hypothetical protein SauraJ_00070 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253316045|ref|ZP_04839258.1| hypothetical protein SauraC_07852 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255006356|ref|ZP_05144957.2| hypothetical protein SauraM_07805 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257793646|ref|ZP_05642625.1| metalloprotease [Staphylococcus aureus A9781]
 gi|258411054|ref|ZP_05681334.1| metalloprotease [Staphylococcus aureus A9763]
 gi|258420142|ref|ZP_05683097.1| metalloprotease [Staphylococcus aureus A9719]
 gi|258437402|ref|ZP_05689386.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443608|ref|ZP_05691947.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258446815|ref|ZP_05694969.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258448729|ref|ZP_05696841.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258450601|ref|ZP_05698663.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258453546|ref|ZP_05701524.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262049144|ref|ZP_06022021.1| hypothetical protein SAD30_0301 [Staphylococcus aureus D30]
 gi|262051230|ref|ZP_06023454.1| hypothetical protein SA930_1661 [Staphylococcus aureus 930918-3]
 gi|269203198|ref|YP_003282467.1| hypothetical protein SAAV_1562 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893071|ref|ZP_06301305.1| metalloprotease [Staphylococcus aureus A8117]
 gi|282920119|ref|ZP_06327844.1| metalloprotease [Staphylococcus aureus A9765]
 gi|282928203|ref|ZP_06335808.1| metalloprotease [Staphylococcus aureus A10102]
 gi|284024629|ref|ZP_06379027.1| hypothetical protein Saura13_08560 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294848601|ref|ZP_06789347.1| metalloprotease [Staphylococcus aureus A9754]
 gi|295406693|ref|ZP_06816498.1| metalloprotease [Staphylococcus aureus A8819]
 gi|296275808|ref|ZP_06858315.1| hypothetical protein SauraMR_05652 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297245725|ref|ZP_06929590.1| metalloprotease [Staphylococcus aureus A8796]
 gi|304380841|ref|ZP_07363501.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54040164|sp|P67137|RRMF_STAAN RecName: Full=Probable rRNA maturation factor
 gi|54042633|sp|P67136|RRMF_STAAM RecName: Full=Probable rRNA maturation factor
 gi|62901407|sp|Q5HFJ0|RRMF_STAAC RecName: Full=Probable rRNA maturation factor
 gi|122539405|sp|Q2FY02|RRMF_STAA8 RecName: Full=Probable rRNA maturation factor
 gi|123485628|sp|Q2FGF3|RRMF_STAA3 RecName: Full=Probable rRNA maturation factor
 gi|166231407|sp|A7X2W8|RRMF_STAA1 RecName: Full=Probable rRNA maturation factor
 gi|172048907|sp|A6QHB3|RRMF_STAAE RecName: Full=Probable rRNA maturation factor
 gi|189038954|sp|A8Z4A9|RRMF_STAAT RecName: Full=Probable rRNA maturation factor
 gi|189038968|sp|A5IT98|RRMF_STAA9 RecName: Full=Probable rRNA maturation factor
 gi|189038976|sp|A6U242|RRMF_STAA2 RecName: Full=Probable rRNA maturation factor
 gi|13701368|dbj|BAB42662.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247341|dbj|BAB57732.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|57286149|gb|AAW38243.1| conserved hypothetical protein TIGR00043 [Staphylococcus aureus
           subsp. aureus COL]
 gi|87126103|gb|ABD20617.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202937|gb|ABD30747.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741123|gb|ABQ49421.1| protein of unknown function UPF0054 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946574|gb|ABR52510.1| protein of unknown function UPF0054 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150374485|dbj|BAF67745.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722023|dbj|BAF78440.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160368607|gb|ABX29578.1| hypothetical protein USA300HOU_1571 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|257787618|gb|EEV25958.1| metalloprotease [Staphylococcus aureus A9781]
 gi|257840204|gb|EEV64668.1| metalloprotease [Staphylococcus aureus A9763]
 gi|257843853|gb|EEV68247.1| metalloprotease [Staphylococcus aureus A9719]
 gi|257848607|gb|EEV72595.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257851014|gb|EEV74957.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257854390|gb|EEV77339.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257858007|gb|EEV80896.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257861759|gb|EEV84558.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257864277|gb|EEV87027.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|259160867|gb|EEW45887.1| hypothetical protein SA930_1661 [Staphylococcus aureus 930918-3]
 gi|259162813|gb|EEW47378.1| hypothetical protein SAD30_0301 [Staphylococcus aureus D30]
 gi|262075488|gb|ACY11461.1| hypothetical protein SAAV_1562 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941060|emb|CBI49444.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282590010|gb|EFB95092.1| metalloprotease [Staphylococcus aureus A10102]
 gi|282594467|gb|EFB99452.1| metalloprotease [Staphylococcus aureus A9765]
 gi|282764389|gb|EFC04515.1| metalloprotease [Staphylococcus aureus A8117]
 gi|285817252|gb|ADC37739.1| predicted metal-dependent hydrolase [Staphylococcus aureus
           04-02981]
 gi|294824627|gb|EFG41050.1| metalloprotease [Staphylococcus aureus A9754]
 gi|294968440|gb|EFG44464.1| metalloprotease [Staphylococcus aureus A8819]
 gi|297177376|gb|EFH36628.1| metalloprotease [Staphylococcus aureus A8796]
 gi|302751400|gb|ADL65577.1| putative metalloprotease [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340568|gb|EFM06502.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312829958|emb|CBX34800.1| uncharacterized protein family UPF0054 family protein
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129849|gb|EFT85839.1| hypothetical protein CGSSa03_02148 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315198734|gb|EFU29062.1| hypothetical protein CGSSa01_09439 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140545|gb|EFW32399.1| conserved hypothetical protein TIGR00043 [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320144082|gb|EFW35851.1| conserved hypothetical protein TIGR00043 [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|329314246|gb|AEB88659.1| Putative metalloprotease [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727414|gb|EGG63870.1| translation metalloprotein YbeY [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329728375|gb|EGG64812.1| translation metalloprotein YbeY [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 155

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L +  + K + +L+  +K     E+  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFAL 71

Query: 89  AFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                +          +LGDI++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPEIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
            + D   M G + +IL   G+ 
Sbjct: 132 TEADEKEMFGRQDTILNAYGLT 153


>gi|167561618|ref|ZP_02354534.1| hypothetical protein BoklE_03576 [Burkholderia oklahomensis EO147]
          Length = 262

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDE+       +   K ++  +    F   +  + ++ F  +    
Sbjct: 113 PELDLAV-----QYGDEVGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 164

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 165 ALNNSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 220

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   D+DA  ME LE  IL  LG  +PY 
Sbjct: 221 LLVHGALHAQGYDHERGDEDAAEMEALEIDILAKLGFPNPYR 262


>gi|288555741|ref|YP_003427676.1| putative metalloprotease [Bacillus pseudofirmus OF4]
 gi|288546901|gb|ADC50784.1| putative metalloprotease [Bacillus pseudofirmus OF4]
          Length = 156

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 6/127 (4%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---- 100
           +  Y   +  VELS+ F D  RI+ +N EYRG D PT+V+SF       D    +M    
Sbjct: 29  AAEYERLDGEVELSITFVDEKRIQEINAEYRGKDIPTDVISFALNDEVEDEADMIMAGMP 88

Query: 101 --LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++   I  +A   G  FE  L  L++HGFLHLLGYDH+ ++D   M   +  I
Sbjct: 89  NALGDIIISVAHISRQAEEYGHSFERELGFLVVHGFLHLLGYDHMTEQDEKAMFSRQEEI 148

Query: 159 LEDLGIN 165
           L   G+ 
Sbjct: 149 LSAYGLT 155


>gi|319400906|gb|EFV89125.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 155

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L E  +   +  L+  +K      N  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVETSWFDQIDQLLTFAKKKENIHNDAELSVTFVDKEEIQNINKVYRDKDKVTDVISFAL 71

Query: 89  AFASS-----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                     D     +LGDI++  ++ + +A   G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPEIDFNDFEIPRVLGDIIICTDVAKEQAESYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
           +D D   M G + +IL + G+ 
Sbjct: 132 NDNDEKEMFGRQDAILNEFGLT 153


>gi|145558828|sp|Q1LR89|RRMF_RALME RecName: Full=Probable rRNA maturation factor
          Length = 197

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 66/133 (49%), Gaps = 7/133 (5%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
            K +   +    +       L++ F D     TLN  YRG D  TNVL+F  A    D  
Sbjct: 68  RKQIEKWVKSALYADAA---LTVRFVDETEGRTLNRSYRGKDYATNVLTFAYAENDDDPV 124

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +    GDIVL   ++E EA    K  E H  HLI+HG LH  GY+H DD +A  ME +E 
Sbjct: 125 A----GDIVLCCPVVESEAKAQKKSLEAHYAHLIVHGVLHAQGYEHDDDTEAEEMEAIET 180

Query: 157 SILEDLGINDPYE 169
             L+ LG  DPY+
Sbjct: 181 ETLQALGFEDPYK 193


>gi|229013523|ref|ZP_04170657.1| metalloprotease [Bacillus mycoides DSM 2048]
 gi|228747760|gb|EEL97629.1| metalloprotease [Bacillus mycoides DSM 2048]
          Length = 136

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 16  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 75

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 76  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 134


>gi|83595101|ref|YP_428853.1| hypothetical protein Rru_A3772 [Rhodospirillum rubrum ATCC 11170]
 gi|123525364|sp|Q2RMS9|RRMF_RHORT RecName: Full=Probable rRNA maturation factor
 gi|83578015|gb|ABC24566.1| Protein of unknown function UPF0054 [Rhodospirillum rubrum ATCC
           11170]
          Length = 200

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/165 (39%), Positives = 92/165 (55%), Gaps = 7/165 (4%)

Query: 13  LQIAVENALWGDEI---HLRTLCEVVFAKAVSNLISKGYFVKEN-IVELSLVFTDSHRIE 68
           +++AV+ A    E     +  L E     AV+     GY +     +E+SL+ TD   ++
Sbjct: 25  VRLAVDGAEGPWEALVPGVAALVEQAVLAAVAAGDPSGYGLTPGTPLEISLLLTDDAAVQ 84

Query: 69  TLNFEYRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            LN +YRG DKPTNVLSF          +    ++LGD+ LA E +  EA  LG    +H
Sbjct: 85  ALNRDYRGQDKPTNVLSFAALDAEEPLPEDGEPVLLGDVALARETVVREAADLGIAPADH 144

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           + HL++HG LHLLGYDH ++++A  MEGLE +IL   GI DPY  
Sbjct: 145 VFHLVVHGVLHLLGYDHEEEEEALDMEGLETAILGARGIADPYAD 189


>gi|228476121|ref|ZP_04060829.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|228269944|gb|EEK11424.1| conserved hypothetical protein [Staphylococcus hominis SK119]
          Length = 153

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 3/124 (2%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLML 101
           +K         ELS+ F D   I+ +N  YR  DK T+V+SF       D        +L
Sbjct: 28  AKEKENIHEDAELSVTFVDKDEIQEINKNYRDKDKVTDVISFALEEDEPDIIGLDIPRVL 87

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI++  ++ + +A      FE  L  L +HGFLHLLGYDH++++D   M G ++ IL  
Sbjct: 88  GDIIICTDVAKEQAESYNHSFERELGFLALHGFLHLLGYDHMNEEDEKEMFGRQKEILNA 147

Query: 162 LGIN 165
            G+ 
Sbjct: 148 YGLT 151


>gi|160876547|ref|YP_001555863.1| putative metalloprotease [Shewanella baltica OS195]
 gi|189040143|sp|A9KZZ5|RRMF_SHEB9 RecName: Full=Probable rRNA maturation factor
 gi|160862069|gb|ABX50603.1| protein of unknown function UPF0054 [Shewanella baltica OS195]
 gi|315268741|gb|ADT95594.1| protein of unknown function UPF0054 [Shewanella baltica OS678]
          Length = 153

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDL + +++A   D +      +  FA  V+N I        N  EL++   DS   + L
Sbjct: 3   LDLALDIQHATTCDWLP----TDEQFALWVTNAIGNSM----NEAELTIRIVDSRESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENEAREQQKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIEGLGFTDPYK 151


>gi|113969346|ref|YP_733139.1| putative metalloprotease [Shewanella sp. MR-4]
 gi|122944050|sp|Q0HLI5|RRMF_SHESM RecName: Full=Probable rRNA maturation factor
 gi|113884030|gb|ABI38082.1| protein of unknown function UPF0054 [Shewanella sp. MR-4]
          Length = 153

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+Q A  +     E       +     ++               EL++   DS   + L
Sbjct: 7   LDVQYATASDYLPSEEQFALWVKTAIGNSMEQ------------AELTIRIVDSRESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICATVVENEAREQDKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTDPYK 151


>gi|329733127|gb|EGG69464.1| translation metalloprotein YbeY [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 155

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L +  + K + +L+  +K     ++  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVKDAWYKQIEDLLEFAKKEEHIQDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFAL 71

Query: 89  AFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                +          +LGDI++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPEIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
            + D   M G + +IL   G+ 
Sbjct: 132 TEADEKEMFGRQDTILNAYGLT 153


>gi|167835504|ref|ZP_02462387.1| hypothetical protein Bpse38_03366 [Burkholderia thailandensis
           MSMB43]
          Length = 268

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 119 PELDLAV-----QYGDEIGDAQRKPLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 170

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   I+E EA   GK    H  H
Sbjct: 171 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPIVEKEAREQGKTLVAHYAH 226

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 227 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 268


>gi|117919455|ref|YP_868647.1| putative metalloprotease [Shewanella sp. ANA-3]
 gi|145572749|sp|A0KTX2|RRMF_SHESA RecName: Full=Probable rRNA maturation factor
 gi|117611787|gb|ABK47241.1| protein of unknown function UPF0054 [Shewanella sp. ANA-3]
          Length = 153

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+Q A  +     E       +     ++               EL++   D+   + L
Sbjct: 7   LDVQYATASDYLPSEDQFALWVKTAIGNSMEQ------------AELTIRIVDARESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENEAREQDKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTDPYK 151


>gi|224542132|ref|ZP_03682671.1| hypothetical protein CATMIT_01307 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524969|gb|EEF94074.1| hypothetical protein CATMIT_01307 [Catenibacterium mitsuokai DSM
           15897]
          Length = 155

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++    +N +   E +       +  +A+  L        E+ VE+S V  D  RI  +
Sbjct: 1   MNIDFVFDNEVDNFENNYEQDFTAIIEQALKTL------GIEDDVEVSCVLVDDERIHEI 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM--LGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N EYR ID+ T+V+SF            +   LGDI ++ +  + +A   G      +  
Sbjct: 55  NREYRHIDRSTDVISFAMEDNDQFYVEGMPRTLGDIFISVDHAKKQAEEYGHSLRREMCF 114

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L  HG LHLLGYDH+ D+    M GL+  IL  L I 
Sbjct: 115 LFTHGILHLLGYDHMTDEQEKEMFGLQDEILGALSIE 151


>gi|39933523|ref|NP_945799.1| hypothetical protein RPA0446 [Rhodopseudomonas palustris CGA009]
 gi|59799039|sp|Q6NCM6|RRMF_RHOPA RecName: Full=Probable rRNA maturation factor
 gi|39647369|emb|CAE25890.1| Protein of unknown function UPF0054 [Rhodopseudomonas palustris
           CGA009]
          Length = 190

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/157 (40%), Positives = 87/157 (55%), Gaps = 6/157 (3%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ +E   W  E       E    +A+    +          EL+++ TD   I  LN  
Sbjct: 33  EVVIEADCWQAEAS----AEATVLRAIETA-ADAVDADTGGAELAVMLTDDDHIRQLNAS 87

Query: 74  YRGIDKPTNVLSFPTAFAS-SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +RG DKPTNVLSFP A        +  MLGDI +AY+ +  EA+  GK F++HL HL +H
Sbjct: 88  FRGKDKPTNVLSFPAAQPEVQPDGAPRMLGDIAIAYQTVRREADDEGKPFDHHLSHLAVH 147

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           GFLHL+GYDH  +++A  ME  ER+IL  LGI DPY 
Sbjct: 148 GFLHLVGYDHETEEEAEEMEDAERAILARLGIPDPYA 184


>gi|289550659|ref|YP_003471563.1| predicted metal-dependent hydrolase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658154|ref|ZP_07911026.1| putative metal-dependent hydrolase [Staphylococcus lugdunensis
           M23590]
 gi|289180191|gb|ADC87436.1| predicted metal-dependent hydrolase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496483|gb|EFU84806.1| putative metal-dependent hydrolase [Staphylococcus lugdunensis
           M23590]
          Length = 153

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKP 80
           I      ++V       +     F KE        ELS+ F D   I+ +N  YR  DK 
Sbjct: 4   IDFSDHTQMVDEAWFQQIDDLLNFAKEQEGITQDAELSVTFVDKEEIQQINKIYRDKDKV 63

Query: 81  TNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           T+V+SF       +        +LGDI++  ++ + +A   G  FE  L  L +HGFLHL
Sbjct: 64  TDVISFALEEDEPEITGLEIPRVLGDIIICTDVAQEQATTYGHSFERELGFLALHGFLHL 123

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH++++D   M G + +IL   G+ 
Sbjct: 124 LGYDHMNEEDEKKMFGRQETILTAYGLT 151


>gi|50593431|gb|AAT79462.1| putative metal-dependent hydrolase [Agrobacterium luteum]
          Length = 186

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/156 (39%), Positives = 82/156 (52%), Gaps = 6/156 (3%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           +  WG E     L       A++         +   +E+S+  +D+  ++TLN  YRG D
Sbjct: 27  SPQWGTEPEWPDLAARAAKAAIAASSRADLMSRNFDIEVSVKLSDNAEVQTLNKAYRGKD 86

Query: 79  KPTNVLSFPTAFAS------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           KPTNVLSFP           +      +LGDI+LAYE    EA      F +H+ HLI+H
Sbjct: 87  KPTNVLSFPQIQPDLLDTLANTDDGEALLGDIILAYETCRDEAVAKDISFSSHITHLIVH 146

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LHLLGYDH ++ DA VME  E + L  LGI +PY
Sbjct: 147 GSLHLLGYDHENEVDAGVMENCEINALATLGIANPY 182


>gi|253732223|ref|ZP_04866388.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253724012|gb|EES92741.1| possible metal-dependent hydrolase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 155

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L +  + K + +L+  +K     E+  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVKDAWYKQIEDLLELAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFAL 71

Query: 89  AFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                +          +LGDI++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPEIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
            + D   M G + +IL   G+ 
Sbjct: 132 TEADEKEMFGRQDTILNAYGLT 153


>gi|167579898|ref|ZP_02372772.1| hypothetical protein BthaT_17231 [Burkholderia thailandensis TXDOH]
 gi|167617971|ref|ZP_02386602.1| hypothetical protein BthaB_16811 [Burkholderia thailandensis Bt4]
          Length = 265

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 116 PELDLAV-----QYGDEIGDAQRRSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 167

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           TLN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 168 TLNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 223

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 224 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 265


>gi|134300321|ref|YP_001113817.1| putative metalloprotease [Desulfotomaculum reducens MI-1]
 gi|189039698|sp|A4J7D9|RRMF_DESRM RecName: Full=Probable rRNA maturation factor
 gi|134053021|gb|ABO50992.1| protein of unknown function UPF0054 [Desulfotomaculum reducens
           MI-1]
          Length = 153

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 9/144 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E +L  L E V   ++    S+GY       E+ L+F D + I +LN EYRGIDK T+VL
Sbjct: 15  EENLLKLVESVVKVSLE---SEGY---SPDAEVGLIFVDDNYIRSLNAEYRGIDKATDVL 68

Query: 85  SFPTAFASSDGCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           SF                +LGDIV++    + +A   G  F   + +L  HG LHLLGYD
Sbjct: 69  SFALNEGEEMPEEEEAEDLLGDIVISLPTAQRQAAEYGHSFNREVAYLTAHGSLHLLGYD 128

Query: 142 HVDDKDACVMEGLERSILEDLGIN 165
           H+ ++D  VM   E  ILE LGIN
Sbjct: 129 HMTEEDRQVMRQKEEGILERLGIN 152


>gi|90581603|ref|ZP_01237394.1| hypothetical protein VAS14_00556 [Vibrio angustum S14]
 gi|90437186|gb|EAS62386.1| hypothetical protein VAS14_00556 [Vibrio angustum S14]
          Length = 154

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ A E+           L  +         ++      +   E+++   D      L
Sbjct: 5   LDLQHATES-----------LDGLPTEAEFQQWLNAAVIPFQADAEVTIRLVDEKESHAL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N EYRG D+PTNVLSFP  F +  G    +LGD+++  +++E EA    K  + H  H++
Sbjct: 54  NLEYRGKDRPTNVLSFP--FEAPPGMELELLGDLIICRQVVEKEALEQNKPLKAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D++A  MEGLE  I++++G  DPY
Sbjct: 112 VHGSLHLLGYDHIEDEEAEEMEGLETEIMQNMGFVDPY 149


>gi|319892627|ref|YP_004149502.1| metal-dependent hydrolase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162323|gb|ADV05866.1| metal-dependent hydrolase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464335|gb|ADX76488.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 153

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 3/124 (2%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLML 101
           +K     +   ELS+ F D   I+ +N +YR  DK T+V+SF                +L
Sbjct: 28  AKNEEGIDEDAELSVTFVDKAEIQEINRDYRQKDKVTDVISFAFEEEEDIFEGMDVPRVL 87

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI++  ++   +A   G  FE  L  L +HGFLHLLGYDH+ ++D  VM G ++ IL  
Sbjct: 88  GDIIICTDVAAEQAEQYGHSFERELGFLALHGFLHLLGYDHMTEEDEKVMFGRQKDILNQ 147

Query: 162 LGIN 165
            G+ 
Sbjct: 148 FGLT 151


>gi|228929346|ref|ZP_04092371.1| metalloprotease [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228935623|ref|ZP_04098438.1| metalloprotease [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228948016|ref|ZP_04110302.1| metalloprotease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228987553|ref|ZP_04147672.1| metalloprotease [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|229093372|ref|ZP_04224479.1| metalloprotease [Bacillus cereus Rock3-42]
 gi|229123841|ref|ZP_04253035.1| metalloprotease [Bacillus cereus 95/8201]
 gi|229141040|ref|ZP_04269583.1| metalloprotease [Bacillus cereus BDRD-ST26]
 gi|229157917|ref|ZP_04285991.1| metalloprotease [Bacillus cereus ATCC 4342]
 gi|229186542|ref|ZP_04313704.1| metalloprotease [Bacillus cereus BGSC 6E1]
 gi|229198429|ref|ZP_04325135.1| metalloprotease [Bacillus cereus m1293]
 gi|228585129|gb|EEK43241.1| metalloprotease [Bacillus cereus m1293]
 gi|228596973|gb|EEK54631.1| metalloprotease [Bacillus cereus BGSC 6E1]
 gi|228625576|gb|EEK82329.1| metalloprotease [Bacillus cereus ATCC 4342]
 gi|228642473|gb|EEK98761.1| metalloprotease [Bacillus cereus BDRD-ST26]
 gi|228659662|gb|EEL15308.1| metalloprotease [Bacillus cereus 95/8201]
 gi|228690028|gb|EEL43829.1| metalloprotease [Bacillus cereus Rock3-42]
 gi|228772285|gb|EEM20732.1| metalloprotease [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|228811706|gb|EEM58041.1| metalloprotease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228824063|gb|EEM69880.1| metalloprotease [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228830360|gb|EEM75972.1| metalloprotease [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
          Length = 143

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 141


>gi|229061996|ref|ZP_04199322.1| metalloprotease [Bacillus cereus AH603]
 gi|229135128|ref|ZP_04263930.1| metalloprotease [Bacillus cereus BDRD-ST196]
 gi|228648357|gb|EEL04390.1| metalloprotease [Bacillus cereus BDRD-ST196]
 gi|228717305|gb|EEL68978.1| metalloprotease [Bacillus cereus AH603]
          Length = 143

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 141


>gi|323440468|gb|EGA98180.1| hypothetical protein SAO11_0764 [Staphylococcus aureus O11]
 gi|323443242|gb|EGB00860.1| hypothetical protein SAO46_0891 [Staphylococcus aureus O46]
          Length = 155

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L +  + K + +L+  +K     E+  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFAL 71

Query: 89  AFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                D          +LGDI++  ++ + +AN  G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPDIDYSDLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
            + D   M G + +IL   G+ 
Sbjct: 132 TEADEKEMFGRQDTILNAYGLT 153


>gi|229163248|ref|ZP_04291203.1| metalloprotease [Bacillus cereus R309803]
 gi|228620311|gb|EEK77182.1| metalloprotease [Bacillus cereus R309803]
          Length = 143

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 141


>gi|103487640|ref|YP_617201.1| hypothetical protein Sala_2159 [Sphingopyxis alaskensis RB2256]
 gi|123078201|sp|Q1GR54|RRMF_SPHAL RecName: Full=Probable rRNA maturation factor
 gi|98977717|gb|ABF53868.1| protein of unknown function UPF0054 [Sphingopyxis alaskensis
           RB2256]
          Length = 168

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/157 (38%), Positives = 79/157 (50%), Gaps = 6/157 (3%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A W D +          A A +            +VE+++  TD   + TLN ++RG DK
Sbjct: 10  APWPDALDWAARAAEAVAAAFAITPFAALADAAPLVEVAVRLTDDAEVHTLNRDFRGRDK 69

Query: 80  PTNVLSFPT------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           PTNVLSFP          ++     ++LGDIVLA E    EA+  G     H  HLI+HG
Sbjct: 70  PTNVLSFPQVQNDLLESLANSDDGEILLGDIVLARETCAREADEKGVSLAAHATHLIVHG 129

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            LHL+GYDH+DD  A  ME LE   L  LGI +PY  
Sbjct: 130 ALHLVGYDHMDDVSAAAMEALEVKALASLGIANPYAD 166


>gi|229169051|ref|ZP_04296767.1| metalloprotease [Bacillus cereus AH621]
 gi|228614460|gb|EEK71569.1| metalloprotease [Bacillus cereus AH621]
          Length = 143

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 141


>gi|23099408|ref|NP_692874.1| putative metalloprotease [Oceanobacillus iheyensis HTE831]
 gi|29428201|sp|Q8EPX8|RRMF_OCEIH RecName: Full=Probable rRNA maturation factor
 gi|22777637|dbj|BAC13909.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 154

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE +  +   +   + + +  ++   V  +  ELS+ F D+  I+ LN  YR  D PT+V
Sbjct: 7   DETNSVSEDYIDLIQRLLDFAAQKEGV-TSEAELSVNFVDNKEIQVLNRNYRQKDTPTDV 65

Query: 84  LSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           +SF    ++ D          L+LGDIV++ +  + ++       E  L  L +HGFLHL
Sbjct: 66  ISFAMQESNEDEMEIIGADGPLVLGDIVISVDKAKEQSIEYDHSLERELGFLAVHGFLHL 125

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH+ ++D   M   +  IL + G+ 
Sbjct: 126 LGYDHMKEEDEKKMFSRQEEILGEFGVE 153


>gi|254511649|ref|ZP_05123716.1| conserved hypothetical protein TIGR00043 [Rhodobacteraceae
           bacterium KLH11]
 gi|221535360|gb|EEE38348.1| conserved hypothetical protein TIGR00043 [Rhodobacteraceae
           bacterium KLH11]
          Length = 164

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 20/172 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L++ +E+  W          E +   A++ ++     ++ ++ E+SL+  +  RI  L
Sbjct: 1   MNLEVTLEDDRW-------QALEPLARHAIAEVLGYC-GLEADLCEISLLGCNDARIAIL 52

Query: 71  NFEYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N E+R    PTNVLS+P                  D    + LGDI ++Y+    EA   
Sbjct: 53  NAEFRETPTPTNVLSWPAEDLAADLPGDKPRQPKPDFTGEIALGDIAISYDTCAREAAEA 112

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GK    H+ HLI+HG LHLLGYDH+ D DA +ME +E  IL  LGI+DPY V
Sbjct: 113 GKPMGAHVTHLIVHGALHLLGYDHIRDPDATLMEAVEVEILGKLGIDDPYNV 164


>gi|121534218|ref|ZP_01666043.1| protein of unknown function UPF0054 [Thermosinus carboxydivorans
           Nor1]
 gi|121307321|gb|EAX48238.1| protein of unknown function UPF0054 [Thermosinus carboxydivorans
           Nor1]
          Length = 155

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---- 94
           AV N  ++ Y + E   E+S+V  D   I  LN +YR  D PT+VLSF            
Sbjct: 24  AVLNKAAEVYGLSEQ-TEVSIVLVDDEYIFELNRQYRDKDVPTDVLSFALNEGDEPAIIN 82

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
             ++++LGDIV++ E    +A   G   E  L +L +HG LHLLGYDH  +++   M   
Sbjct: 83  DPAAMLLGDIVISLETAARQAEEFGHGLERELAYLTLHGMLHLLGYDHETEEERVKMRNE 142

Query: 155 ERSILEDLGIN 165
           E  IL  LGI 
Sbjct: 143 EEYILSQLGIT 153


>gi|242242843|ref|ZP_04797288.1| possible metal-dependent hydrolase [Staphylococcus epidermidis
           W23144]
 gi|242233706|gb|EES36018.1| possible metal-dependent hydrolase [Staphylococcus epidermidis
           W23144]
          Length = 155

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-----DGCSSL 99
           +K      N  ELS+   D   I+ +N  YR  DK T+V+SF            D     
Sbjct: 28  AKKKENIHNDAELSVTLVDKEEIQNINKVYRDKDKVTDVISFALEEDEPEIDFNDFDIPR 87

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDI++  ++ + +A   G  FE  L  L +HGFLHLLGYDH++D D   M G + +IL
Sbjct: 88  VLGDIIICTDVAKEQAESYGHSFERELGFLALHGFLHLLGYDHMNDNDEKEMFGRQDAIL 147

Query: 160 EDLGIN 165
            + G+ 
Sbjct: 148 NEFGLT 153


>gi|261366880|ref|ZP_05979763.1| putative metalloprotease [Subdoligranulum variabile DSM 15176]
 gi|282570994|gb|EFB76529.1| putative metalloprotease [Subdoligranulum variabile DSM 15176]
          Length = 166

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + + +   ++  ++ + ++    F  E   E+S+ F D+HRI  LN +YR  D  T+VLS
Sbjct: 14  VKIPSGLRILIRRSCNAVLDFEKF--EGSAEISVTFVDNHRIHELNKQYRDKDSATDVLS 71

Query: 86  FPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP      +   +     +LGDIV++ E    +A + G   +  + +L +H  LHLLGYD
Sbjct: 72  FPMGENGEYDIDEDNGCKILGDIVISMERAMEQAELYGHSLQREVAYLTVHSMLHLLGYD 131

Query: 142 HVDDK-DACVMEGLERSILEDLGIN 165
           H     +A  M   E ++L  LG+ 
Sbjct: 132 HEASGLEAVRMREKEEAVLIKLGLP 156


>gi|153001814|ref|YP_001367495.1| putative metalloprotease [Shewanella baltica OS185]
 gi|304410290|ref|ZP_07391909.1| protein of unknown function UPF0054 [Shewanella baltica OS183]
 gi|307301999|ref|ZP_07581757.1| protein of unknown function UPF0054 [Shewanella baltica BA175]
 gi|166229104|sp|A6WRJ3|RRMF_SHEB8 RecName: Full=Probable rRNA maturation factor
 gi|151366432|gb|ABS09432.1| protein of unknown function UPF0054 [Shewanella baltica OS185]
 gi|304351699|gb|EFM16098.1| protein of unknown function UPF0054 [Shewanella baltica OS183]
 gi|306914037|gb|EFN44458.1| protein of unknown function UPF0054 [Shewanella baltica BA175]
          Length = 153

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDL + +++A   D +      +  FA  V+  I        N  EL++   DS   + L
Sbjct: 3   LDLALDIQHATTCDWLP----TDEQFALWVTTAIGNSM----NEAELTIRIVDSRESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENEAREQQKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIEGLGFTDPYK 151


>gi|312110181|ref|YP_003988497.1| hypothetical protein GY4MC1_1074 [Geobacillus sp. Y4.1MC1]
 gi|311215282|gb|ADP73886.1| protein of unknown function UPF0054 [Geobacillus sp. Y4.1MC1]
          Length = 156

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 7/153 (4%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  + DE +  T  ++   + + N  ++   V +   E+ + F D+ RI  +N +YRG D
Sbjct: 4   NIDFIDETNEVTKEQMEMIERLLNYAAETEHVPDG-AEVGVSFVDNERIRIINRDYRGKD 62

Query: 79  KPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +PT+V+SF                + L+LGDI+++    + +A   G  F   L  L +H
Sbjct: 63  QPTDVISFALEEKGEGEIEIVGADAPLLLGDIIISIPKAKEQAEEYGHSFMRELGFLAVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLHLLGYDH  +++  +M   ++ ILE  G+ 
Sbjct: 123 GFLHLLGYDHKTEEEEKIMFSKQKDILERYGLT 155


>gi|50086161|ref|YP_047671.1| hypothetical protein ACIAD3160 [Acinetobacter sp. ADP1]
 gi|59799110|sp|Q6F7W6|RRMF_ACIAD RecName: Full=Probable rRNA maturation factor
 gi|49532137|emb|CAG69849.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
          Length = 159

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 8/162 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L ++++ A    ++ L+        KA+   +   +   +   E+ +   D  +   L
Sbjct: 1   MKLNLSLQQAFKSPDLALK---RAHIKKAIETTLD--HVEVKTDSEIGIACVDHEQSHRL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N EYRG DK TNVLSFP+           +  LGD+V+   ++  EA    K  + H +H
Sbjct: 56  NLEYRGKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMH 115

Query: 129 LIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           +++HG LHLLGYDH   D+DA  ME LE  IL  LG+ +PY+
Sbjct: 116 MLVHGTLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQ 157


>gi|120597877|ref|YP_962451.1| putative metalloprotease [Shewanella sp. W3-18-1]
 gi|146293951|ref|YP_001184375.1| putative metalloprotease [Shewanella putrefaciens CN-32]
 gi|145572750|sp|A1RGV2|RRMF_SHESW RecName: Full=Probable rRNA maturation factor
 gi|166200358|sp|A4Y9E3|RRMF_SHEPC RecName: Full=Probable rRNA maturation factor
 gi|120557970|gb|ABM23897.1| protein of unknown function UPF0054 [Shewanella sp. W3-18-1]
 gi|145565641|gb|ABP76576.1| protein of unknown function UPF0054 [Shewanella putrefaciens CN-32]
 gi|319427328|gb|ADV55402.1| protein of unknown function UPF0054 [Shewanella putrefaciens 200]
          Length = 153

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 14/159 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+Q A  +     E  L    +                   +  EL++   DS   + L
Sbjct: 7   LDVQYATTSDWLPTEEQLMLWAKTAI------------GNGMDRAELTIRIVDSRESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPAEIELPLLGDLVICAAVVENEAREQNKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  +PY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTNPYK 151


>gi|319760452|ref|YP_004124390.1| hypothetical protein BVAF_319 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039166|gb|ADV33716.1| conserved hypothetical protein [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 155

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 12/158 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L+LQIA  N           L  +   K     I K +F+    +EL++   D   +  L
Sbjct: 7   LNLQIACTN-----------LYGIPNKKIFQKWIKKIFFLYNKKIELTIRIVDIQEMLYL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N+ Y G   PTNVLSFP       G  S +LGDIV+  +IIE E+         H  H+I
Sbjct: 56  NWYYAGKKHPTNVLSFPFK-TPLKGILSSLLGDIVICKQIIEYESKQYNISSIMHWAHMI 114

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGYDH+ +KDA +M  +E +I++  G ++ Y
Sbjct: 115 IHGSLHLLGYDHILNKDAELMHQMELNIMQKFGYHNYY 152


>gi|295399217|ref|ZP_06809199.1| protein of unknown function UPF0054 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978683|gb|EFG54279.1| protein of unknown function UPF0054 [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 156

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 7/153 (4%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  + DE +  T  ++   + + N  ++   V +   E+ + F D+ RI  +N +YRG D
Sbjct: 4   NIDFIDETNEVTKEQMEMIERLLNYAAETEHVPDG-AEVGVSFVDNERIRIINRDYRGKD 62

Query: 79  KPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +PT+V+SF                + L+LGDI+++    + +A   G  F   L  L +H
Sbjct: 63  QPTDVISFALEEKGEGEIEIVGADAPLLLGDIIISIPKAKEQAEEYGHSFMRELGFLAVH 122

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLHLLGYDH  +++  +M   ++ ILE  G+ 
Sbjct: 123 GFLHLLGYDHKTEEEEKIMFSKQKDILEQYGLT 155


>gi|152976733|ref|YP_001376250.1| putative metalloprotease [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189039807|sp|A7GSZ7|RRMF_BACCN RecName: Full=Probable rRNA maturation factor
 gi|152025485|gb|ABS23255.1| protein of unknown function UPF0054 [Bacillus cytotoxicus NVH
           391-98]
          Length = 156

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YRG D+PT+V+SF                   MLGD++
Sbjct: 36  EDGTELSVTFVDNERIREINRDYRGKDQPTDVISFALEDMGEGEVEIIGADMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ IL   G+
Sbjct: 96  ISIPRTKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGKQKEILGAFGL 154


>gi|254373021|ref|ZP_04988510.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570748|gb|EDN36402.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 168

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 44  AEVNLSIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 103

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 104 NEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 159


>gi|104783749|ref|YP_610247.1| putative metalloprotease [Pseudomonas entomophila L48]
 gi|122401726|sp|Q1I4H2|RRMF_PSEE4 RecName: Full=Probable rRNA maturation factor
 gi|95112736|emb|CAK17464.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 157

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/162 (38%), Positives = 83/162 (51%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQ    +A   D+   R  CE+   +  ++             E+++   D      
Sbjct: 3   ELDLQ-RATDAAAPDDAAFRRWCELALRQRTAD------------SEMTIRLVDEAEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSFP A    D     +LGD+V+   ++E EA   GK  E H  HL
Sbjct: 50  LNHTYRHKDYATNVLSFP-ADVPDDLLDIPLLGDLVICVPVVEREAREQGKALEAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG LHLLGYDH++D +A  ME LER +L +LG  DPY  D
Sbjct: 109 VIHGCLHLLGYDHIEDDEAEEMEALERELLAELGHPDPYADD 150


>gi|297539315|ref|YP_003675084.1| hypothetical protein M301_2139 [Methylotenera sp. 301]
 gi|297258662|gb|ADI30507.1| protein of unknown function UPF0054 [Methylotenera sp. 301]
          Length = 145

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +P L+L  AV+ A   +++  R+   +    A+               E ++   D    
Sbjct: 1   MPTLNL--AVQYASTLNDLPSRSQFRLWAKAAI-----------RVDTEAAIRIVDEAEG 47

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN  YRG D  TNVL+FP            ++GDI++   ++  EA    K  E H  
Sbjct: 48  RELNKAYRGKDYATNVLTFPLTE------EPHLMGDIIICAPVVAAEALAQNKPLEAHYA 101

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HL +HG LHL GYDH  +  A +ME LE +I+  LG  +PY
Sbjct: 102 HLTVHGILHLHGYDHEVEAQAELMESLETAIITKLGYANPY 142


>gi|160945168|ref|ZP_02092394.1| hypothetical protein FAEPRAM212_02687 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442899|gb|EDP19904.1| hypothetical protein FAEPRAM212_02687 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105595|emb|CBL03139.1| conserved hypothetical protein TIGR00043 [Faecalibacterium
           prausnitzii SL3/3]
          Length = 163

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + + +   ++  +A + ++   +F  +   E+S+ F D+  I  LN +YR    PT+VLS
Sbjct: 14  VKVPSGLRILIRRACNAVLEYEHF--DRPAEISVTFVDNAAIAELNNQYRNKPMPTDVLS 71

Query: 86  FPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP          +    +MLGDIV++ E    +AN+ G   +  +  L +H  LHLLGYD
Sbjct: 72  FPLGENGKYDIDENNGCMMLGDIVISMERAMEQANLYGHPLQREVAFLTVHSMLHLLGYD 131

Query: 142 HVDDK-DACVMEGLERSILEDLGIN 165
           H +   +A  M   E ++L  LG+ 
Sbjct: 132 HENGGLEAMRMREKEEAVLLQLGLP 156


>gi|167643996|ref|YP_001681659.1| hypothetical protein Caul_0023 [Caulobacter sp. K31]
 gi|189030198|sp|B0T157|RRMF_CAUSK RecName: Full=Probable rRNA maturation factor
 gi|167346426|gb|ABZ69161.1| protein of unknown function UPF0054 [Caulobacter sp. K31]
          Length = 162

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L + I +E+  W          E +  +A   ++     ++ +   + ++  D   ++TL
Sbjct: 3   LTVDIEIEDEAW---TKAEPEVEALVWRAAQAVLDAHEDIEGHG--IVILLADDDSVQTL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++R  D  TNVLSFP+   S        +GDI LA+ + + EA   GK   +HL HL+
Sbjct: 58  NRDFRQKDYATNVLSFPSV-TSPGANPEGQIGDIALAFGVCQREAAEQGKSLAHHLQHLV 116

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HG LHLLGYDH DD DA  ME  ER IL  L I DPY 
Sbjct: 117 AHGVLHLLGYDHQDDADAEAMEAFEREILAGLDIPDPYA 155


>gi|56707741|ref|YP_169637.1| hypothetical protein FTT_0616c [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670212|ref|YP_666769.1| hypothetical protein FTF0616c [Francisella tularensis subsp.
           tularensis FSC198]
 gi|254370244|ref|ZP_04986250.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874554|ref|ZP_05247264.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|59799004|sp|Q5NH55|RRMF_FRATT RecName: Full=Probable rRNA maturation factor
 gi|123359556|sp|Q14IK7|RRMF_FRAT1 RecName: Full=Probable rRNA maturation factor
 gi|56604233|emb|CAG45249.1| cconserved hypothetical protein, UPF0054 family [Francisella
           tularensis subsp. tularensis SCHU S4]
 gi|110320545|emb|CAL08632.1| cconserved hypothetical protein, UPF0054 family [Francisella
           tularensis subsp. tularensis FSC198]
 gi|151568488|gb|EDN34142.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840553|gb|EET18989.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 168

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 44  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 103

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 104 NEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 159


>gi|268611989|ref|ZP_06145716.1| hypothetical protein RflaF_21081 [Ruminococcus flavefaciens FD-1]
          Length = 170

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 8/147 (5%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E+ +     ++  +    +++   F K+   E+S+ F  ++ I+ LN  YR  D  T+VL
Sbjct: 14  EVKVPVGIRLLIRRCCQAVLTTENFGKD--AEVSVSFVSNNEIKNLNKIYRNKDSVTDVL 71

Query: 85  SFPTAFAS-----SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           SFP          +    ++ LGD+V++ E    +A   G   E  +  L +H  LHLLG
Sbjct: 72  SFPLTGDDGTVEINPETGAVQLGDVVISLETAVKQAQNYGHSLEREVGFLTVHSMLHLLG 131

Query: 140 YDHVDDK-DACVMEGLERSILEDLGIN 165
           YDH   + D  +M   E S+LE LGI+
Sbjct: 132 YDHETSQLDQRIMREKEESVLEKLGIS 158


>gi|89053194|ref|YP_508645.1| hypothetical protein Jann_0703 [Jannaschia sp. CCS1]
 gi|122499500|sp|Q28UJ2|RRMF_JANSC RecName: Full=Probable rRNA maturation factor
 gi|88862743|gb|ABD53620.1| protein of unknown function UPF0054 [Jannaschia sp. CCS1]
          Length = 160

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 14/166 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ I ++   W D + L  L +      +++L      +  +   LS++  D  RI TL
Sbjct: 1   MEIDILIDAPHW-DALDLCGLAQSACVATLTDLS-----LDPDDFALSILACDDARIATL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM--------LGDIVLAYEIIEIEANVLGKEF 122
           N ++RG   PTNVLS+P+   + +   ++         LGD+ LA+E    EA   GK  
Sbjct: 55  NTQFRGKPTPTNVLSWPSEDRAPETPGAMPHLSDLAAELGDLALAFETCAREAADGGKPL 114

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            +H+ HLI+HG LH LG+DH  D DA +ME LE  IL  LG+ DPY
Sbjct: 115 PDHISHLIVHGLLHCLGFDHETDADADLMERLETRILARLGVPDPY 160


>gi|299822888|ref|ZP_07054774.1| probable metalloprotease [Listeria grayi DSM 20601]
 gi|299816417|gb|EFI83655.1| probable metalloprotease [Listeria grayi DSM 20601]
          Length = 161

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +PRL+L +  E      E +      + FA          Y   E   E+S+ FTD+ RI
Sbjct: 1   MPRLELDMIDETEKLPKETNALVFDILQFAA--------DYLKLEEGTEMSVTFTDNERI 52

Query: 68  ETLNFEYRGIDKPTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
             +N EYR  D+ T+V+SF             +   +      LGDI+++ E  E +A  
Sbjct: 53  REINREYRDKDQATDVISFALEELGEGETEIDWGELEVEVPRNLGDIIISTEKAEEQAAS 112

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            G   E  +  L +HG LHLLGYDH++ ++  VM GL++ +L+  G+
Sbjct: 113 YGHTKEREVGFLAVHGLLHLLGYDHMEKEEEKVMFGLQKEVLDAYGL 159


>gi|229031951|ref|ZP_04187938.1| metalloprotease [Bacillus cereus AH1271]
 gi|229174977|ref|ZP_04302497.1| metalloprotease [Bacillus cereus MM3]
 gi|228608645|gb|EEK65947.1| metalloprotease [Bacillus cereus MM3]
 gi|228729415|gb|EEL80405.1| metalloprotease [Bacillus cereus AH1271]
          Length = 143

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 141


>gi|329911493|ref|ZP_08275544.1| A heat shock protein involved in translation, putative protease
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545865|gb|EGF30976.1| A heat shock protein involved in translation, putative protease
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 154

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 3/141 (2%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
             L  +V    V   +    F      EL++ F DS    TLN +YR  D  TNVL+F  
Sbjct: 16  PRLATLVTRPLVRRWVQAALFAP---AELTVRFVDSDEGRTLNRDYRSKDYATNVLTFAY 72

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                D    +   D++L  ++++ EA   GK    H  HL++HG +H  GYDH D+ +A
Sbjct: 73  NDGEEDPNDDITRADLILCTDVLQAEALAQGKPLLAHAAHLVVHGVMHAQGYDHEDEVEA 132

Query: 149 CVMEGLERSILEDLGINDPYE 169
             ME LE  +L  LG  +PY+
Sbjct: 133 DEMEALEIEVLAKLGFGNPYQ 153


>gi|228916935|ref|ZP_04080497.1| metalloprotease [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228842759|gb|EEM87845.1| metalloprotease [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 143

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKGILEAFGL 141


>gi|328675995|gb|AEB28670.1| hypothetical protein FN3523_0813 [Francisella cf. novicida 3523]
          Length = 162

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E+++    +  I+ +N ++R  DKPTN++SF         +  +   LGDIV+A  ++E
Sbjct: 38  AEVNVNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPEDIADDFLGDIVIAPAVLE 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA   GKE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 98  KEAKEQGKELNHHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 153


>gi|229104934|ref|ZP_04235591.1| metalloprotease [Bacillus cereus Rock3-28]
 gi|228678508|gb|EEL32728.1| metalloprotease [Bacillus cereus Rock3-28]
          Length = 143

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGTEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 141


>gi|229098774|ref|ZP_04229712.1| metalloprotease [Bacillus cereus Rock3-29]
 gi|229117799|ref|ZP_04247164.1| metalloprotease [Bacillus cereus Rock1-3]
 gi|228665662|gb|EEL21139.1| metalloprotease [Bacillus cereus Rock1-3]
 gi|228684618|gb|EEL38558.1| metalloprotease [Bacillus cereus Rock3-29]
          Length = 143

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 141


>gi|319409916|emb|CBY90241.1| putative metalloprotease NMB0538 [Neisseria meningitidis WUE 2594]
          Length = 251

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 112 AERDFYRWAWSALKNEY----RRADISLILLDEEEARDYNRDYRGKDYATNVLSFALNEG 167

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
            +  C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 168 ETLPCQVSEKLYGDLIICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 227

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 228 IMEAEEIRLMRAAGFPNPYQED 249


>gi|89074962|ref|ZP_01161407.1| hypothetical protein SKA34_20817 [Photobacterium sp. SKA34]
 gi|89049201|gb|EAR54765.1| hypothetical protein SKA34_20817 [Photobacterium sp. SKA34]
          Length = 154

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/158 (35%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDLQ A E+           L  +         ++      +   E+++   D     TL
Sbjct: 5   LDLQHATES-----------LDGLPTEAEFQQWLNAAVIPFQADAEVTIRLVDEKESHTL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N EYR  D+PTNVLSFP  F +  G    +LGD+++  +++E EA    K  + H  H++
Sbjct: 54  NLEYRDKDRPTNVLSFP--FEAPPGVELELLGDLIICRQVVEKEALEQNKPLKAHWAHMV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH++D++A  ME LE  I++++G  DPY
Sbjct: 112 VHGSLHLLGYDHIEDEEAEEMENLETEIMQNMGFVDPY 149


>gi|149183353|ref|ZP_01861791.1| hypothetical protein BSG1_06587 [Bacillus sp. SG-1]
 gi|148848950|gb|EDL63162.1| hypothetical protein BSG1_06587 [Bacillus sp. SG-1]
          Length = 156

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 12/160 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L+I      + DE +  +  +    +++ +  + G    E   EL++ F  + RI+ +
Sbjct: 1   MNLEI-----DFLDETNKLSESDRELVQSLLDY-AAGQENVEPASELTVSFVTNERIQEI 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFEN 124
           N EYR  D+PT+V+SF       D           +LGDI+++ E  + +A+  G  F  
Sbjct: 55  NKEYRDKDQPTDVISFALEELGEDETVIVGDGIPRILGDIIISVEKAKDQADEYGHSFSR 114

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            L  L +HGFLHLLGYDH++++D   M G ++ IL+  G+
Sbjct: 115 ELGFLALHGFLHLLGYDHMNEEDEKRMFGRQKEILDGYGL 154


>gi|57867019|ref|YP_188713.1| hypothetical protein SERP1137 [Staphylococcus epidermidis RP62A]
 gi|62901408|sp|Q5HNX7|RRMF_STAEQ RecName: Full=Probable rRNA maturation factor
 gi|57637677|gb|AAW54465.1| conserved hypothetical protein TIGR00043 [Staphylococcus
           epidermidis RP62A]
          Length = 155

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L E  +   +  L+  +K      N  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVETSWLDQIDQLLTFAKKKENIHNDAELSVTFVDKDEIQNINKVYRDKDKVTDVISFAL 71

Query: 89  AFASS-----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                     D     +LGDI++  ++ + ++   G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPEIDFNDFDIPRVLGDIIICTDVAKEQSESYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
           +D D   M G + +IL + G+ 
Sbjct: 132 NDNDEKEMFGRQDAILNEFGLT 153


>gi|319935426|ref|ZP_08009863.1| metalloprotease [Coprobacillus sp. 29_1]
 gi|319809642|gb|EFW06055.1| metalloprotease [Coprobacillus sp. 29_1]
          Length = 153

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 5/150 (3%)

Query: 19  NALWGDEIHL-RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           + ++ DE+ L +   E  F K V   +   Y   E+ VELS +  D  RI  +N EYR I
Sbjct: 4   DFVYEDELKLSKDNYEQQFIKIVEAALQ--YLKIEDDVELSCIIVDDERIHEINKEYRNI 61

Query: 78  DKPTNVLSFPTAFASSDGCSSLM--LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           D+ T+V+SF          + +   LGDI ++Y    I+A       +  +  L  HG L
Sbjct: 62  DRSTDVISFALEDNDQFYVAGMPRSLGDIFISYHHACIQAEEYQHTLKREMCFLFTHGLL 121

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HLLGYDH++++D   M  L++ IL  LGI 
Sbjct: 122 HLLGYDHMNEEDEKEMFTLQKEILNQLGIE 151


>gi|27468175|ref|NP_764812.1| hypothetical protein SE1257 [Staphylococcus epidermidis ATCC 12228]
 gi|251810987|ref|ZP_04825460.1| metal-dependent hydrolase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876004|ref|ZP_06284871.1| metalloprotein, YbeY/ UPF0054family [Staphylococcus epidermidis
           SK135]
 gi|29428185|sp|Q8CSD3|RRMF_STAES RecName: Full=Probable rRNA maturation factor
 gi|27315721|gb|AAO04856.1|AE016748_90 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|251805497|gb|EES58154.1| metal-dependent hydrolase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295029|gb|EFA87556.1| metalloprotein, YbeY/ UPF0054family [Staphylococcus epidermidis
           SK135]
 gi|329725400|gb|EGG61883.1| translation metalloprotein YbeY [Staphylococcus epidermidis VCU144]
 gi|329737264|gb|EGG73518.1| translation metalloprotein YbeY [Staphylococcus epidermidis VCU028]
          Length = 155

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L E  +   +  L+  +K      N  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVETSWFDQIDQLLTFAKKKENIHNDAELSVTFVDKDEIQNINKVYRDKDKVTDVISFAL 71

Query: 89  AFASS-----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                     D     +LGDI++  ++ + ++   G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPEIDFNDFDIPRVLGDIIICTDVAKEQSESYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
           +D D   M G + +IL + G+ 
Sbjct: 132 NDNDEKEMFGRQDAILNEFGLT 153


>gi|154686792|ref|YP_001421953.1| putative metalloprotease [Bacillus amyloliquefaciens FZB42]
 gi|189039682|sp|A7Z6U6|RRMF_BACA2 RecName: Full=Probable rRNA maturation factor
 gi|154352643|gb|ABS74722.1| YqfG [Bacillus amyloliquefaciens FZB42]
          Length = 157

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE +  +   +   + +    ++   V++   E+S+    +  I  +N +YRG D PT+V
Sbjct: 9   DETNSVSADALQEVEKLLQFAAEKEGVQDQ-AEVSVTIVTNEEIREINRDYRGKDTPTDV 67

Query: 84  LSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           +SF                   +LGDI+++ +  + +A   G  F   L  L +HGFLHL
Sbjct: 68  ISFALEEEGEDEVEIVGADMPPVLGDIIISADRTKEQAEEYGHSFMRELGFLAVHGFLHL 127

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH+  ++   M   ++ +L++ G+ 
Sbjct: 128 LGYDHMTKEEEEEMFSKQKDLLDEYGLT 155


>gi|256851189|ref|ZP_05556578.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260660613|ref|ZP_05861528.1| metal-dependent hydrolase [Lactobacillus jensenii 115-3-CHN]
 gi|282934655|ref|ZP_06339898.1| putative metalloprotease [Lactobacillus jensenii 208-1]
 gi|297206054|ref|ZP_06923449.1| metal-dependent hydrolase [Lactobacillus jensenii JV-V16]
 gi|256616251|gb|EEU21439.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260548335|gb|EEX24310.1| metal-dependent hydrolase [Lactobacillus jensenii 115-3-CHN]
 gi|281301230|gb|EFA93531.1| putative metalloprotease [Lactobacillus jensenii 208-1]
 gi|297149180|gb|EFH29478.1| metal-dependent hydrolase [Lactobacillus jensenii JV-V16]
          Length = 174

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE +        + K + +L+  +K    K+N +E+S+ F D  +   +N +YRG
Sbjct: 5   DITYNDETNFLADTSRDWRKWIMDLLLMAKKEISKDNNLEMSINFVDEDKSHQINRDYRG 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D   +  +GD+ +   +I+  A   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGEEGVDLSSFIEDPDFTEDIGDLFMCISVIKRHAEEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH++  +A  M G++  +LE+ G+ 
Sbjct: 125 YTLVHGFLHLNGYDHIEPAEAKEMFGIQGKVLEEYGLP 162


>gi|85705230|ref|ZP_01036329.1| hypothetical protein ROS217_17217 [Roseovarius sp. 217]
 gi|85670103|gb|EAQ24965.1| hypothetical protein ROS217_17217 [Roseovarius sp. 217]
          Length = 162

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 16/165 (9%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
            + +E+  W     L  L E      + +L      +     E+S++  D  RI  LN +
Sbjct: 4   DVVIEDDRW-QAAGLEHLAERAARATLEHLS-----LDPEAWEISVLGCDDARIAALNED 57

Query: 74  YRGIDKPTNVLSFPTAFASSDGC----------SSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +R   +PTNVLS+P+    ++                LGDI +A+E    EA    K   
Sbjct: 58  FRDKPQPTNVLSWPSEERGAEAAGVRPGLPVSGPDPELGDIAIAWETCLREAAEGDKSLA 117

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +H+ HLI+H  LHLLGYDH+ D+DA +ME  E  IL  LG++DPY
Sbjct: 118 DHVTHLIVHAVLHLLGYDHLRDQDATLMETTEVEILGKLGVSDPY 162


>gi|293366469|ref|ZP_06613146.1| metal-dependent hydrolase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319238|gb|EFE59607.1| metal-dependent hydrolase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329735371|gb|EGG71663.1| translation metalloprotein YbeY [Staphylococcus epidermidis VCU045]
          Length = 155

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 31  LCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           L E  +   +  L+  +K      N  ELS+ F D   I+ +N  YR  DK T+V+SF  
Sbjct: 12  LVETSWFDQIDQLLTFAKKKENIHNDAELSVTFVDKDEIQNINKVYRDKDKVTDVISFAL 71

Query: 89  AFASS-----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                     D     +LGDI++  ++ + ++   G  FE  L  L +HGFLHLLGYDH+
Sbjct: 72  EEDEPEIDFNDFDIPRVLGDIIICRDVAKEQSESYGHSFERELGFLALHGFLHLLGYDHM 131

Query: 144 DDKDACVMEGLERSILEDLGIN 165
           +D D   M G + +IL + G+ 
Sbjct: 132 NDNDEKEMFGRQDAILNEFGLT 153


>gi|192288881|ref|YP_001989486.1| hypothetical protein Rpal_0450 [Rhodopseudomonas palustris TIE-1]
 gi|192282630|gb|ACE99010.1| protein of unknown function UPF0054 [Rhodopseudomonas palustris
           TIE-1]
          Length = 167

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/157 (40%), Positives = 86/157 (54%), Gaps = 6/157 (3%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ +E   W  E       E    +A+    +          EL+++ TD   I  LN  
Sbjct: 10  EVVIEADCWQAEAS----AEATVLRAIETA-ADAVDADTGGAELAVMLTDDDHIRQLNAS 64

Query: 74  YRGIDKPTNVLSFPTAFAS-SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +R  DKPTNVLSFP A        +  MLGDI +AY+ +  EA+  GK F++HL HL +H
Sbjct: 65  FRDKDKPTNVLSFPAAQPEVQPDGAPRMLGDIAIAYQTVRREADDEGKPFDHHLSHLAVH 124

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           GFLHL+GYDH  D++A  ME  ER+IL  LGI DPY 
Sbjct: 125 GFLHLVGYDHETDEEAEEMEDAERAILARLGIPDPYA 161


>gi|332686716|ref|YP_004456490.1| metal-dependent hydrolase [Melissococcus plutonius ATCC 35311]
 gi|332370725|dbj|BAK21681.1| metal-dependent hydrolase [Melissococcus plutonius ATCC 35311]
          Length = 159

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 14/159 (8%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVK-ENIVELSLVFTDSHRIETLNFEYRGI 77
           +  + DE +     E  F K    L     F+K  +  E+S+ FT + +I+ +N ++RG 
Sbjct: 2   DITFIDETN--QFSENYFTKIKELLQFSADFLKLPDTTEMSVTFTTNEKIQQINQKFRGK 59

Query: 78  DKPTNVLSFPTAFASSDG-----------CSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + PT+V+SF       D                 LGDI+++ E  E +A   G  FE  L
Sbjct: 60  NVPTDVISFALEDEGEDEFPIILDEMLTSLPPKNLGDIIISIEKAEEQAQDYGHSFEREL 119

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L +HGFLHL GYDH++++D   M  L+R IL+D G+ 
Sbjct: 120 GFLAVHGFLHLNGYDHMNEEDEKEMFDLQRKILDDYGLK 158


>gi|254374471|ref|ZP_04989952.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151572190|gb|EDN37844.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 168

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 44  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 103

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 104 NEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 159


>gi|75762398|ref|ZP_00742269.1| Hypothetical metal-binding protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218899469|ref|YP_002447880.1| hypothetical protein BCG9842_B0816 [Bacillus cereus G9842]
 gi|226708103|sp|B7IYF4|RRMF_BACC2 RecName: Full=Probable rRNA maturation factor
 gi|74490110|gb|EAO53455.1| Hypothetical metal-binding protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218542257|gb|ACK94651.1| conserved hypothetical protein TIGR00043 [Bacillus cereus G9842]
          Length = 156

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 8/149 (5%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           D I      +  +   +  ++ K   ++  E+  E+S+ F D+ RI  +N +YR  D+PT
Sbjct: 6   DFIDETEEVKEAYMSLIREVLEKAAQMENIEDGAEVSVTFVDNERIREINRDYRDKDQPT 65

Query: 82  NVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           +V+SF                   MLGD++++    + +A   G  F+  L  L +HGFL
Sbjct: 66  DVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFL 125

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HLLGYDH+ +++   M G ++ ILE  G+
Sbjct: 126 HLLGYDHMTEEEEKEMFGRQKEILEAFGL 154


>gi|47567867|ref|ZP_00238575.1| conserved hypothetical protein protein TIGR00043 [Bacillus cereus
           G9241]
 gi|47555544|gb|EAL13887.1| conserved hypothetical protein protein TIGR00043 [Bacillus cereus
           G9241]
          Length = 156

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 154


>gi|308174320|ref|YP_003921025.1| metal-dependent hydrolase [Bacillus amyloliquefaciens DSM 7]
 gi|307607184|emb|CBI43555.1| putative metal-dependent hydrolase [Bacillus amyloliquefaciens DSM
           7]
 gi|328554267|gb|AEB24759.1| metal-binding heat shock protein [Bacillus amyloliquefaciens TA208]
 gi|328912664|gb|AEB64260.1| putative metal-dependent hydrolase [Bacillus amyloliquefaciens LL3]
          Length = 157

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE +  +   +   + +    ++   V++   E+S+    +  I  +N +YRG D PT+V
Sbjct: 9   DETNSVSADALQEVEKLLQFAAEKEGVQDQ-AEVSVTIVTNDEIREINRDYRGKDTPTDV 67

Query: 84  LSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           +SF                   +LGDI+++ +  + +A   G  F   L  L +HGFLHL
Sbjct: 68  ISFALEEEGEDEVEIVGADMPPVLGDIIISADRTKEQAEEYGHSFMRELGFLAVHGFLHL 127

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH+  ++   M   ++ +L++ G+ 
Sbjct: 128 LGYDHMTKEEEEEMFSKQKDLLDEYGLT 155


>gi|84515223|ref|ZP_01002585.1| hypothetical protein SKA53_01156 [Loktanella vestfoldensis SKA53]
 gi|84510506|gb|EAQ06961.1| hypothetical protein SKA53_01156 [Loktanella vestfoldensis SKA53]
          Length = 164

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 16/170 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + + VE+  W        +     A+  S+ +     ++ ++ E++++  D  RI  L
Sbjct: 1   MSVDVVVEDLRWA------AVDIDALAQQASDAVFDRLGLEPSVFEIAVLACDDARIAAL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N ++RG   PTNVLS+P+               D      LGDI +AY+    EA   G 
Sbjct: 55  NADFRGKPAPTNVLSWPSDERAPAVAGEMPLPPDPVMDTELGDIAIAYDTCLREAEAAGS 114

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +F +H +HL++HG LHLLG+DH  D DA +MEGLE  IL  +G+++PY  
Sbjct: 115 QFIHHCLHLLVHGTLHLLGFDHERDLDATLMEGLEVEILGKMGVDNPYRD 164


>gi|254877220|ref|ZP_05249930.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843241|gb|EET21655.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 169

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEI 110
           +  E++L    +  I+ +N ++R  DKPTN++SF         +  +    GDIV+A E+
Sbjct: 47  SQAEVNLSIVSNQEIQQINKQFRHKDKPTNIISFEFEKPEGLPEDIADNFWGDIVIAPEV 106

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++ EA    K  ++H  H+ IHG LHLLGYDH+DD +A  ME LE  +L +LGI +PY
Sbjct: 107 LKKEAKEQNKNLDDHWQHIFIHGLLHLLGYDHIDDIEAEEMENLEIELLAELGIANPY 164


>gi|332678363|gb|AEE87492.1| predicted metal-dependent hydrolase [Francisella cf. novicida Fx1]
          Length = 162

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 38  AEVNLSIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 98  NEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 153


>gi|42783429|ref|NP_980676.1| putative metalloprotease [Bacillus cereus ATCC 10987]
 gi|59799126|sp|Q730N3|RRMF_BACC1 RecName: Full=Probable rRNA maturation factor
 gi|42739358|gb|AAS43284.1| conserved hypothetical protein TIGR00043 [Bacillus cereus ATCC
           10987]
          Length = 156

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 154


>gi|229019527|ref|ZP_04176344.1| metalloprotease [Bacillus cereus AH1273]
 gi|229025769|ref|ZP_04182168.1| metalloprotease [Bacillus cereus AH1272]
 gi|228735477|gb|EEL86073.1| metalloprotease [Bacillus cereus AH1272]
 gi|228741783|gb|EEL91966.1| metalloprotease [Bacillus cereus AH1273]
          Length = 143

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD------GCSSLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 23  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIIGAEMPRMLGDLI 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 83  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 141


>gi|157693031|ref|YP_001487493.1| putative metalloprotease [Bacillus pumilus SAFR-032]
 gi|166987419|sp|A8FFB6|RRMF_BACP2 RecName: Full=Probable rRNA maturation factor
 gi|157681789|gb|ABV62933.1| possible metal-dependent hydrolase [Bacillus pumilus SAFR-032]
          Length = 159

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 8/149 (5%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE    +  ++   + +    +    VK+   E+S+    +  I  +N EYRG D PT+V
Sbjct: 9   DETGQVSKEQLEEVEKLLQFAADALEVKDQ-AEVSVTIVSNEEIHQINKEYRGKDAPTDV 67

Query: 84  LSFPTAFASSDGCS-------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           +SF                    +LGDI+++ +  + +A   G  F   L  L IHGFLH
Sbjct: 68  ISFALEEEGEGEIEIIGADDIPPVLGDIIISVDRTKEQAEEYGHSFMRELGFLTIHGFLH 127

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LLG+DH+ ++D   M   +  IL+D G++
Sbjct: 128 LLGFDHMTEEDEKEMFAKQTKILDDYGLS 156


>gi|224456812|ref|ZP_03665285.1| hypothetical protein FtultM_03352 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158912|gb|ADA78303.1| hypothetical protein NE061598_03525 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 162

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 38  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 98  NEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 153


>gi|114046573|ref|YP_737123.1| putative metalloprotease [Shewanella sp. MR-7]
 gi|123131666|sp|Q0HXT9|RRMF_SHESR RecName: Full=Probable rRNA maturation factor
 gi|113888015|gb|ABI42066.1| protein of unknown function UPF0054 [Shewanella sp. MR-7]
          Length = 153

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDL + V+ A   D +       +    A+ N + +         EL++   D+   + L
Sbjct: 3   LDLALDVQYATASDYLPSEEQFSLWVKTAIGNSMEQ--------AELTIRIVDARESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENEAREQDKILEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTDPYK 151


>gi|242373875|ref|ZP_04819449.1| metal-dependent hydrolase [Staphylococcus epidermidis M23864:W1]
 gi|242348429|gb|EES40031.1| metal-dependent hydrolase [Staphylococcus epidermidis M23864:W1]
          Length = 155

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-----SL 99
           +K     E+  ELS+ F D   I+ +N  YR  DK T+V+SF       D          
Sbjct: 28  AKKQENIESDAELSVTFVDKDEIQNINKVYRDKDKVTDVISFALEEDEPDIDMNDLEIPR 87

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDI++  ++ + +A   G  FE  L  L +HGFLHLLGYDH+ + D   M G + +IL
Sbjct: 88  VLGDIIICTDVAQEQAESYGHSFERELGFLALHGFLHLLGYDHMTEDDEKEMFGRQDAIL 147

Query: 160 EDLGIN 165
              G+ 
Sbjct: 148 NSYGLT 153


>gi|228902826|ref|ZP_04066971.1| metalloprotease [Bacillus thuringiensis IBL 4222]
 gi|228967368|ref|ZP_04128403.1| metalloprotease [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228792403|gb|EEM39970.1| metalloprotease [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228856835|gb|EEN01350.1| metalloprotease [Bacillus thuringiensis IBL 4222]
          Length = 154

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 8/149 (5%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           D I      +  +   +  ++ K   ++  E+  E+S+ F D+ RI  +N +YR  D+PT
Sbjct: 4   DFIDETEEVKEAYMSLIREVLEKAAQMENIEDGAEVSVTFVDNERIREINRDYRDKDQPT 63

Query: 82  NVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           +V+SF                   MLGD++++    + +A   G  F+  L  L +HGFL
Sbjct: 64  DVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFL 123

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HLLGYDH+ +++   M G ++ ILE  G+
Sbjct: 124 HLLGYDHMTEEEEKEMFGRQKEILEAFGL 152


>gi|197106913|ref|YP_002132290.1| hypothetical protein PHZ_c3452 [Phenylobacterium zucineum HLK1]
 gi|196480333|gb|ACG79861.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 154

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 59/158 (37%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I VE+  W   +      E +   A    ++      E    ++L+  D   +  LN 
Sbjct: 2   IDIEVEDPAWTAALP---DAEALVRAAAKAALASEGAGGEG---VTLLLADDAAVRELNA 55

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            +RG D  TNVLSFP             LGD+ LA  +   EA   GK   +HL HL++H
Sbjct: 56  RFRGKDSATNVLSFPAP-----PNPERHLGDVALACGVCAREAAEQGKPLAHHLQHLVVH 110

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           G LHLLGYDH+ + +A  MEGLER IL  LG+ DPY V
Sbjct: 111 GVLHLLGYDHMREDEAEAMEGLERDILAGLGVPDPYAV 148


>gi|30264373|ref|NP_846750.1| putative metalloprotease [Bacillus anthracis str. Ames]
 gi|47529824|ref|YP_021173.1| putative metalloprotease [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187198|ref|YP_030450.1| putative metalloprotease [Bacillus anthracis str. Sterne]
 gi|49478831|ref|YP_038358.1| putative metalloprotease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52141201|ref|YP_085629.1| putative metalloprotease [Bacillus cereus E33L]
 gi|118479472|ref|YP_896623.1| putative metalloprotease [Bacillus thuringiensis str. Al Hakam]
 gi|165872063|ref|ZP_02216703.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0488]
 gi|167634675|ref|ZP_02392995.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0442]
 gi|167638548|ref|ZP_02396824.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0193]
 gi|170687424|ref|ZP_02878641.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0465]
 gi|170707368|ref|ZP_02897822.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0389]
 gi|177653283|ref|ZP_02935535.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0174]
 gi|190566886|ref|ZP_03019802.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis
           Tsiankovskii-I]
 gi|196034368|ref|ZP_03101777.1| conserved hypothetical protein TIGR00043 [Bacillus cereus W]
 gi|196039279|ref|ZP_03106585.1| conserved hypothetical protein TIGR00043 [Bacillus cereus
           NVH0597-99]
 gi|196046290|ref|ZP_03113516.1| conserved hypothetical protein TIGR00043 [Bacillus cereus 03BB108]
 gi|206978415|ref|ZP_03239284.1| conserved hypothetical protein TIGR00043 [Bacillus cereus H3081.97]
 gi|217961793|ref|YP_002340363.1| putative metalloprotease [Bacillus cereus AH187]
 gi|218905440|ref|YP_002453274.1| conserved hypothetical protein TIGR00043 [Bacillus cereus AH820]
 gi|222097748|ref|YP_002531805.1| metalloprotease [Bacillus cereus Q1]
 gi|225866284|ref|YP_002751662.1| conserved hypothetical protein TIGR00043 [Bacillus cereus 03BB102]
 gi|227817079|ref|YP_002817088.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           CDC 684]
 gi|229601436|ref|YP_002868592.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0248]
 gi|254684060|ref|ZP_05147920.1| putative metalloprotease [Bacillus anthracis str. CNEVA-9066]
 gi|254721894|ref|ZP_05183683.1| putative metalloprotease [Bacillus anthracis str. A1055]
 gi|254736408|ref|ZP_05194114.1| putative metalloprotease [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741446|ref|ZP_05199133.1| putative metalloprotease [Bacillus anthracis str. Kruger B]
 gi|254750884|ref|ZP_05202923.1| putative metalloprotease [Bacillus anthracis str. Vollum]
 gi|254757788|ref|ZP_05209815.1| putative metalloprotease [Bacillus anthracis str. Australia 94]
 gi|301055795|ref|YP_003794006.1| hypothetical protein BACI_c42720 [Bacillus anthracis CI]
 gi|33301868|sp|Q81LT4|RRMF_BACAN RecName: Full=Probable rRNA maturation factor
 gi|59799092|sp|Q634N8|RRMF_BACCZ RecName: Full=Probable rRNA maturation factor
 gi|59799112|sp|Q6HDL8|RRMF_BACHK RecName: Full=Probable rRNA maturation factor
 gi|145558821|sp|A0RIS3|RRMF_BACAH RecName: Full=Probable rRNA maturation factor
 gi|226706167|sp|B7JN28|RRMF_BACC0 RecName: Full=Probable rRNA maturation factor
 gi|226706184|sp|B7HPK2|RRMF_BACC7 RecName: Full=Probable rRNA maturation factor
 gi|254803861|sp|B9IY70|RRMF_BACCQ RecName: Full=Probable rRNA maturation factor
 gi|254803907|sp|C1ESJ7|RRMF_BACC3 RecName: Full=Probable rRNA maturation factor
 gi|254803928|sp|C3P8K9|RRMF_BACAA RecName: Full=Probable rRNA maturation factor
 gi|254803930|sp|C3L5Q6|RRMF_BACAC RecName: Full=Probable rRNA maturation factor
 gi|30259031|gb|AAP28236.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           Ames]
 gi|47504972|gb|AAT33648.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49181125|gb|AAT56501.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           Sterne]
 gi|49330387|gb|AAT61033.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51974670|gb|AAU16220.1| conserved hypothetical protein [Bacillus cereus E33L]
 gi|118418697|gb|ABK87116.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|164712194|gb|EDR17731.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0488]
 gi|167513396|gb|EDR88766.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0193]
 gi|167530127|gb|EDR92862.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0442]
 gi|170127612|gb|EDS96485.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0389]
 gi|170668619|gb|EDT19365.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0465]
 gi|172081565|gb|EDT66637.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0174]
 gi|190561877|gb|EDV15846.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992910|gb|EDX56869.1| conserved hypothetical protein TIGR00043 [Bacillus cereus W]
 gi|196022760|gb|EDX61441.1| conserved hypothetical protein TIGR00043 [Bacillus cereus 03BB108]
 gi|196029906|gb|EDX68507.1| conserved hypothetical protein TIGR00043 [Bacillus cereus
           NVH0597-99]
 gi|206743371|gb|EDZ54809.1| conserved hypothetical protein TIGR00043 [Bacillus cereus H3081.97]
 gi|217066303|gb|ACJ80553.1| conserved hypothetical protein TIGR00043 [Bacillus cereus AH187]
 gi|218537495|gb|ACK89893.1| conserved hypothetical protein TIGR00043 [Bacillus cereus AH820]
 gi|221241806|gb|ACM14516.1| Predicted metal-dependent hydrolase [Bacillus cereus Q1]
 gi|225787544|gb|ACO27761.1| conserved hypothetical protein TIGR00043 [Bacillus cereus 03BB102]
 gi|227007063|gb|ACP16806.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           CDC 684]
 gi|229265844|gb|ACQ47481.1| conserved hypothetical protein TIGR00043 [Bacillus anthracis str.
           A0248]
 gi|300377964|gb|ADK06868.1| protein of unknown function UPF0054 [Bacillus cereus biovar
           anthracis str. CI]
 gi|324328207|gb|ADY23467.1| metal-binding heat shock protein [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 156

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 154


>gi|194017716|ref|ZP_03056326.1| conserved hypothetical protein [Bacillus pumilus ATCC 7061]
 gi|194010616|gb|EDW20188.1| conserved hypothetical protein [Bacillus pumilus ATCC 7061]
          Length = 159

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + +  E      E        + FA  V  +        ++  E+S+    +  I  +N 
Sbjct: 5   IDLIDETGQVSKEQLEEVEKLLQFAADVLEV--------KDQAEVSVTIVSNEEIHQINK 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCS-------SLMLGDIVLAYEIIEIEANVLGKEFENH 125
           EYRG D PT+V+SF                    +LGDI+++ +  + +A   G  F   
Sbjct: 57  EYRGKDAPTDVISFALEEEGEGEIEIIGADDIPPVLGDIIISVDRTKEQAEEYGHSFMRE 116

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L  L IHGFLHLLG+DH+ ++D   M   +  IL+D G++
Sbjct: 117 LGFLTIHGFLHLLGFDHMTEEDEKEMFAKQTKILDDYGLS 156


>gi|254804422|ref|YP_003082643.1| hypothetical protein NMO_0420 [Neisseria meningitidis alpha14]
 gi|254667965|emb|CBA04232.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
          Length = 251

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 56/175 (32%), Positives = 81/175 (46%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA     I      E  F +   + +   Y       ++S
Sbjct: 83  RAKQYPFLTLQRQRFHLNFENASSAAGIP----AERDFYRWAWSALKNEY----RRADIS 134

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++  EA 
Sbjct: 135 LILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVLKEAA 194

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 195 EQGKTPERHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 249


>gi|313884192|ref|ZP_07817958.1| translation metalloprotein YbeY [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620639|gb|EFR32062.1| translation metalloprotein YbeY [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 157

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+ +  +  +V   + V  L  +   + +N  E+ +    +  I  LN +YR ID+PT+V
Sbjct: 7   DDNNFLSQAQVELVQDVIKLAGQKLILPDN-FEVDISIVTNEAIHELNRDYRNIDRPTDV 65

Query: 84  LSFPTAFASSDGCSS---------LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           LSF     + D             + LGDI++++  I+ +A   G  FE  L  L +HGF
Sbjct: 66  LSFALEETAEDDPFGQIDMSEELGIFLGDIIISFPKIQEQATEYGHSFERELAFLAVHGF 125

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LHL GYDH        M GL+  +L   G+ 
Sbjct: 126 LHLNGYDHQSPDQEKEMFGLQEEVLSAYGLE 156


>gi|163942059|ref|YP_001646943.1| putative metalloprotease [Bacillus weihenstephanensis KBAB4]
 gi|226701663|sp|A9VHT0|RRMF_BACWK RecName: Full=Probable rRNA maturation factor
 gi|163864256|gb|ABY45315.1| protein of unknown function UPF0054 [Bacillus weihenstephanensis
           KBAB4]
          Length = 156

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E   ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 154


>gi|161869467|ref|YP_001598633.1| hypothetical protein NMCC_0479 [Neisseria meningitidis 053442]
 gi|161595020|gb|ABX72680.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 211

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA     I      E  F +   + +   Y       ++S
Sbjct: 43  RAKKYPFLTLQRQRFHLNFENASSAAGIP----AERDFYRWAWSALKNEY----RRADIS 94

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF            S  + GD+++  +++  EA 
Sbjct: 95  LILLDEEEARAYNRDYRGKDYATNVLSFALNEGETLPGQVSEKLYGDLIICPQVVLKEAA 154

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 155 EQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFPNPYQED 209


>gi|270160107|ref|ZP_06188763.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|289165115|ref|YP_003455253.1| metal-dependent hydrolase [Legionella longbeachae NSW150]
 gi|269988446|gb|EEZ94701.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|288858288|emb|CBJ12156.1| putative metal-dependent hydrolase [Legionella longbeachae NSW150]
          Length = 158

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 12/161 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+Q A +  L   E  L  L  +                 +   EL++       +  L
Sbjct: 5   IDIQNATDEYLPISEDQLTHLASLTLR------------DYKKEAELTIRLVTPEEMLQL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N+ YR I+K TNVL+FP    +       +LGD+++  +++  E+  L K  E+H   ++
Sbjct: 53  NYTYRKINKTTNVLAFPCTLPTEVQLDYSLLGDVIICPQVLLDESKQLNKTLESHWALIV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           IHG LHLLGYDH+ D DA +M+ +E  +L +LG  +PY+ +
Sbjct: 113 IHGILHLLGYDHIKDDDAAIMQSIEIKLLTELGFANPYDAE 153


>gi|71892097|ref|YP_277827.1| hypothetical protein BPEN_324 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|123641012|sp|Q492Z0|RRMF_BLOPB RecName: Full=Probable rRNA maturation factor
 gi|71796203|gb|AAZ40954.1| conserved hypothetical protein [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 157

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 7   NLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           N   +DLQ+A +N           L  +   K   + +S  + + +  +EL++   D   
Sbjct: 4   NQVIIDLQLACKN-----------LHGLPNRKMFQSWVSAIFSIYKKKIELTVRIVDIKE 52

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  LN+ Y   D PTNVLSFP  F    G  S +LGD+VL  +IIE E+        +H 
Sbjct: 53  MHYLNWYYLKKDCPTNVLSFP--FTPPLGMKSPLLGDVVLCRQIIEYESKEKNVPGRSHW 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            H+IIHG LHLLGY+H+ DK+A +M+ +ER+IL+  G 
Sbjct: 111 AHMIIHGSLHLLGYNHIVDKEAILMQRVERNILQKCGY 148


>gi|228954587|ref|ZP_04116612.1| metalloprotease [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229071806|ref|ZP_04205021.1| metalloprotease [Bacillus cereus F65185]
 gi|229081563|ref|ZP_04214061.1| metalloprotease [Bacillus cereus Rock4-2]
 gi|229180580|ref|ZP_04307922.1| metalloprotease [Bacillus cereus 172560W]
 gi|229192512|ref|ZP_04319475.1| metalloprotease [Bacillus cereus ATCC 10876]
 gi|228591089|gb|EEK48945.1| metalloprotease [Bacillus cereus ATCC 10876]
 gi|228603004|gb|EEK60483.1| metalloprotease [Bacillus cereus 172560W]
 gi|228701768|gb|EEL54256.1| metalloprotease [Bacillus cereus Rock4-2]
 gi|228711401|gb|EEL63361.1| metalloprotease [Bacillus cereus F65185]
 gi|228805244|gb|EEM51838.1| metalloprotease [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 154

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 8/149 (5%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           D I      +  +   +  ++ K   ++  E+  E+S+ F D+ RI  +N +YR  D+PT
Sbjct: 4   DFIDETEEVKEAYMSLIREVLEKAAQMENIEDGAEVSVTFVDNERIREINRDYRDKDQPT 63

Query: 82  NVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           +V+SF                   MLGD++++    + +A   G  F+  L  L +HGFL
Sbjct: 64  DVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFL 123

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 124 HLLGYDHMTEEDEKEMFGRQKEILEAFGL 152


>gi|302389485|ref|YP_003825306.1| protein of unknown function UPF0054 [Thermosediminibacter oceani
           DSM 16646]
 gi|302200113|gb|ADL07683.1| protein of unknown function UPF0054 [Thermosediminibacter oceani
           DSM 16646]
          Length = 162

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 8/139 (5%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E +  K V   +       E  VE+S+VF D+  I  LN  YRG D PT+VLSF     S
Sbjct: 20  EELVKKIVEFALDFEGVAGE--VEVSVVFVDNDYIRELNRSYRGKDMPTDVLSFSMRETS 77

Query: 93  SDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           +D           MLGDIV++ E    +A+  G  FE  + +L++HG LHLLGYDH +++
Sbjct: 78  ADEAFDGNEEVERMLGDIVISLEKAREQADAFGHSFEREVGYLVVHGVLHLLGYDHEEER 137

Query: 147 DACVMEGLERSILEDLGIN 165
           D  +M   E  +L    + 
Sbjct: 138 DKKIMREKEEEVLRAFRLT 156


>gi|329924060|ref|ZP_08279323.1| translation metalloprotein YbeY [Paenibacillus sp. HGF5]
 gi|328940899|gb|EGG37207.1| translation metalloprotein YbeY [Paenibacillus sp. HGF5]
          Length = 165

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 19/169 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + LQ+A     W +E     + E + A   + L   G        E+ L F D   I  L
Sbjct: 1   MSLQLA-----WNNEQEDFQISEELIALLEAILQKAGEAEGVTDGEVDLTFVDDEGIHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLMLGDIVLAYEIIEIEAN 116
           N EYRGID+PT+VLSF     ++D                   +LGDI+++    ++++ 
Sbjct: 56  NREYRGIDRPTDVLSFAMNEITNDELEIIYELEEGEELESVPDVLGDIIISVPRAKLQSE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E  L  L +HGFLHLLGYDH D+     M G + ++L ++G+ 
Sbjct: 116 EYGHSLERELGFLFVHGFLHLLGYDHQDEASEAEMMGKQEAVLAEVGLT 164


>gi|167010863|ref|ZP_02275794.1| hypothetical protein Ftulh_09158 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254369232|ref|ZP_04985244.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|145558840|sp|Q2A3U8|RRMF_FRATH RecName: Full=Probable rRNA maturation factor
 gi|157122182|gb|EDO66322.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 168

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 44  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 103

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 104 NEAKEQNKEINDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 159


>gi|167630510|ref|YP_001681009.1| hypothetical protein HM1_2448 [Heliobacterium modesticaldum Ice1]
 gi|238687861|sp|B0TAE8|RRMF_HELMI RecName: Full=Probable rRNA maturation factor
 gi|167593250|gb|ABZ84998.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
          Length = 166

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 9/162 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L I  E         +    +++  +     + +  +  E+  E+SLV T+  +I  L
Sbjct: 1   MELYIVDEREGVTKAPEMEESWQLMLEQLAFACLEEVGYPLED-TEISLVLTNDEKIRRL 59

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS--------SLMLGDIVLAYEIIEIEANVLGKEF 122
           N EYR ID+PT+VLSF       D             +LGDI+++ E  E +A   G   
Sbjct: 60  NAEYRNIDQPTDVLSFAMEEGLDDEADFHFDDPTAGKVLGDIIISVETAERQAQEYGHSL 119

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E  +  L +HG LHLLGYDH D++    M  LE  IL + G+
Sbjct: 120 EREMGFLFVHGMLHLLGYDHCDEEQRSRMRALEEKILRNQGL 161


>gi|228923055|ref|ZP_04086348.1| metalloprotease [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228836688|gb|EEM82036.1| metalloprotease [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 154

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           D I      +  +   +  ++ K   ++  E+ VE+S+ F D+ RI  +N +YR  D+PT
Sbjct: 4   DFIDETEEVKEAYMSLIREVLEKAAQMENIEDGVEVSVTFVDNERIREINRDYRDKDQPT 63

Query: 82  NVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           +V+SF                   MLGD++++    + +A   G  F+  L  L +HGFL
Sbjct: 64  DVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFL 123

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 124 HLLGYDHMTEEDEKEMFGRQKEILEAFGL 152


>gi|89256242|ref|YP_513604.1| hypothetical protein FTL_0884 [Francisella tularensis subsp.
           holarctica LVS]
 gi|89144073|emb|CAJ79323.1| cconserved hypothetical protein, UPF0054 family [Francisella
           tularensis subsp. holarctica LVS]
          Length = 173

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 49  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 108

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 109 NEAKEQNKEINDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 164


>gi|167626246|ref|YP_001676746.1| hypothetical protein Fphi_0025 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189030202|sp|B0TXS6|RRMF_FRAP2 RecName: Full=Probable rRNA maturation factor
 gi|167596247|gb|ABZ86245.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 158

 Score =  156 bits (396), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 2/118 (1%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEI 110
           +  E+++    +  I+ +N ++R  DKPTN++SF         +  ++   GDIV+A E+
Sbjct: 36  SQAEVNVSIVSNQEIQQINKQFRHKDKPTNIISFEFEKPEGLPEDIAANFWGDIVIAPEV 95

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++ EA    K  ++H  H+ IHG LHLLGYDH+DD +A  ME LE  +L +LGI +PY
Sbjct: 96  LKKEAKEQNKNLDDHWQHIFIHGLLHLLGYDHIDDIEAEEMENLEIELLAELGIANPY 153


>gi|296504797|ref|YP_003666497.1| putative metalloprotease [Bacillus thuringiensis BMB171]
 gi|296325849|gb|ADH08777.1| putative metalloprotease [Bacillus thuringiensis BMB171]
          Length = 156

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 154


>gi|238854660|ref|ZP_04644990.1| putative metalloprotease [Lactobacillus jensenii 269-3]
 gi|260664397|ref|ZP_05865249.1| metal-dependent hydrolase [Lactobacillus jensenii SJ-7A-US]
 gi|282932949|ref|ZP_06338346.1| putative metalloprotease [Lactobacillus jensenii 208-1]
 gi|313472199|ref|ZP_07812691.1| putative metalloprotease [Lactobacillus jensenii 1153]
 gi|238832450|gb|EEQ24757.1| putative metalloprotease [Lactobacillus jensenii 269-3]
 gi|239529579|gb|EEQ68580.1| putative metalloprotease [Lactobacillus jensenii 1153]
 gi|260561462|gb|EEX27434.1| metal-dependent hydrolase [Lactobacillus jensenii SJ-7A-US]
 gi|281302984|gb|EFA95189.1| putative metalloprotease [Lactobacillus jensenii 208-1]
          Length = 174

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE +        + K + +L+  +K    KEN +E+S+ F D  +   +N +YR 
Sbjct: 5   DITYNDETNFLADTSRDWRKWIMDLLLMAKKEIGKENNLEMSINFVDEDKSHQINRDYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D   +  +GD+ +   +I+  A      F+    
Sbjct: 65  KDRPTDVISFAIEDGEEGVDLASFISDPDFTEDIGDLFMCISVIKRHAEEYETGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH++  +A  M G++  +LE+ G+ 
Sbjct: 125 YTLVHGFLHLNGYDHIEPAEAKEMFGIQGKVLEEYGLP 162


>gi|53804491|ref|YP_113914.1| hypothetical protein MCA1457 [Methylococcus capsulatus str. Bath]
 gi|59799087|sp|Q608N3|RRMF_METCA RecName: Full=Probable rRNA maturation factor
 gi|53758252|gb|AAU92543.1| conserved hypothetical protein TIGR00043 [Methylococcus capsulatus
           str. Bath]
          Length = 150

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 57/160 (35%), Positives = 79/160 (49%), Gaps = 17/160 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L LQ A  +A+  D    R   E    K                 E+ +   D      
Sbjct: 3   DLTLQRASTSAV-PDSAAFRLWAEAALEK--------------PHAEVVIRIVDREESAA 47

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG   PTNVLSFP  F   +G  + +LGD+V+   ++E EA   GK  E H  H+
Sbjct: 48  LNSTYRGKTGPTNVLSFP--FVVPEGVPNDLLGDLVICAPVVEREAAEQGKPVEAHWAHM 105

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HG LHL GYDH+++ +A +ME  E +IL  LG+ +PY 
Sbjct: 106 VVHGMLHLQGYDHIEEAEAEIMENREIAILRGLGMENPYR 145


>gi|323703317|ref|ZP_08114967.1| protein of unknown function UPF0054 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531680|gb|EGB21569.1| protein of unknown function UPF0054 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 153

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
             E +L  L E V    + +L ++GY  +    E+ L+F D   I++LN EYRGIDKPT+
Sbjct: 13  PVEDNLYQLVEAVV---MESLKAEGYSTE---AEVGLIFVDDGYIQSLNAEYRGIDKPTD 66

Query: 83  VLSFPTAFASSDGCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           VLSF                +LGDIV++      ++   G  FE  +  L  HG LHLLG
Sbjct: 67  VLSFAMHEGEPMPEEEEAEDLLGDIVISLPTALRQSKEYGHSFEREVAFLTAHGALHLLG 126

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YDH  + +  VM   E +IL  L I 
Sbjct: 127 YDHQTEAERQVMREKEEAILGRLNIT 152


>gi|218233833|ref|YP_002369110.1| putative metalloprotease [Bacillus cereus B4264]
 gi|226706180|sp|B7HCS7|RRMF_BACC4 RecName: Full=Probable rRNA maturation factor
 gi|218161790|gb|ACK61782.1| conserved hypothetical protein TIGR00043 [Bacillus cereus B4264]
          Length = 156

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 154


>gi|295706636|ref|YP_003599711.1| hypothetical protein BMD_4537 [Bacillus megaterium DSM 319]
 gi|294804295|gb|ADF41361.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 156

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 37  AKAVSNLISKG--YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
            K +  L+     Y   +   E+S+ F D+ RI+ +N +YR  ++PT+V+SF       D
Sbjct: 19  QKELEQLLEAAAIYENLQEDAEVSVTFVDNDRIQEINHQYRHKNQPTDVISFALEEMGED 78

Query: 95  GC------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                      +LGDIV++      +A      F   L  L +HGFLHLLGYDH   +D 
Sbjct: 79  EMQIIGDEMPRVLGDIVISIPKAHEQAEEYNHSFMRELGFLTVHGFLHLLGYDHETSEDE 138

Query: 149 CVMEGLERSILEDLGIN 165
             M   ++ ILE  G++
Sbjct: 139 KEMFTRQKDILEQYGLS 155


>gi|149914113|ref|ZP_01902645.1| S-adenosylmethionine synthetase [Roseobacter sp. AzwK-3b]
 gi|149812397|gb|EDM72228.1| S-adenosylmethionine synthetase [Roseobacter sp. AzwK-3b]
          Length = 165

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 19/164 (11%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E+  W   + L  L E     A+++L      +  +  E++++  D  RI  LN ++R  
Sbjct: 8   EDDRWQT-LDLPGLAETAARAALTHL-----GLAPDAWEIAILACDDARIAALNADFRDK 61

Query: 78  DKPTNVLSFPTAFASSD-------------GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
             PTNVLS+P    + D               +   LGDI +A++  + EA   GK   +
Sbjct: 62  PVPTNVLSWPETDLAPDTPGARPEAPAQAGDDAPTPLGDIAIAWDTCQREAEAAGKPLPD 121

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H+ HLI+H  LHLLGYDH+ D+DA +ME  E +IL  LG+ DPY
Sbjct: 122 HVTHLIVHAVLHLLGYDHIRDQDATLMETTEVAILGKLGVPDPY 165


>gi|228910137|ref|ZP_04073957.1| metalloprotease [Bacillus thuringiensis IBL 200]
 gi|228849654|gb|EEM94488.1| metalloprotease [Bacillus thuringiensis IBL 200]
          Length = 154

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E   E+S+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 34  EGGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 152


>gi|30022381|ref|NP_834012.1| putative metalloprotease [Bacillus cereus ATCC 14579]
 gi|33301866|sp|Q812T1|RRMF_BACCR RecName: Full=Probable rRNA maturation factor
 gi|29897939|gb|AAP11213.1| hypothetical Metal-Binding Protein [Bacillus cereus ATCC 14579]
          Length = 156

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 154


>gi|170025228|ref|YP_001721733.1| putative metalloprotease [Yersinia pseudotuberculosis YPIII]
 gi|238688388|sp|B1JG97|RRMF_YERPY RecName: Full=Probable rRNA maturation factor
 gi|169751762|gb|ACA69280.1| protein of unknown function UPF0054 [Yersinia pseudotuberculosis
           YPIII]
          Length = 157

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 15/164 (9%)

Query: 6   VNLPRLDLQIAV-ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQIA  ++     E   +   E V              + + + E+++   D 
Sbjct: 1   MSQVILDLQIACADSQGLPTEGDFQRWLEAVLP------------LFQPVSEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA    K    
Sbjct: 49  AESHDLNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEKEAIEQEKALLA 106

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H  H+++HG LHLLGYDH+DD +A  ME +E  I+  LG  DPY
Sbjct: 107 HWAHMVVHGSLHLLGYDHIDDDEAEEMELIEIEIMHGLGYPDPY 150


>gi|11387300|sp|P57517|RRMF_BUCAI RecName: Full=Probable rRNA maturation factor
          Length = 155

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 6/133 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K +  ++ K    K+NI  +++   D   I+ LNF YR  +KPTN+LSFP  F     
Sbjct: 24  FKKWIQKILCK----KKNINIITIRIVDEWEIKKLNFNYRKKNKPTNILSFP--FNKFIK 77

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            +  +LGD+VL   IIE E+    K  E+H  H+ IHG LHLLGYDH ++K+A +ME LE
Sbjct: 78  INYKLLGDLVLCKNIIEKESLKYNKSLESHWAHITIHGTLHLLGYDHQNNKEADIMERLE 137

Query: 156 RSILEDLGINDPY 168
             I+  L    P+
Sbjct: 138 NKIMLSLNYKKPH 150


>gi|225175056|ref|ZP_03729052.1| protein of unknown function UPF0054 [Dethiobacter alkaliphilus AHT
           1]
 gi|225169232|gb|EEG78030.1| protein of unknown function UPF0054 [Dethiobacter alkaliphilus AHT
           1]
          Length = 155

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            DE ++     +V A  +    +       +  E+SL   D   I  LN  +R +D PT+
Sbjct: 6   NDEQNIPLSSGIVSAMEIITKAALVDHNFPSDAEVSLTLCDDATIHELNKTWRSVDAPTD 65

Query: 83  VLSFPTAFASS---DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           VLSFP     +        LMLGD++++ E    +A   G   E  +++L +HG LHLLG
Sbjct: 66  VLSFPLLGDMTLKVPPGEELMLGDVIISVERARAQAQEFGHSVEREILYLYVHGLLHLLG 125

Query: 140 YDHVDDKDACVMEGLERSILEDLG 163
           YDH+++++   M  LE  +L+++G
Sbjct: 126 YDHLEEEEKREMRSLEEKLLKEVG 149


>gi|148244289|ref|YP_001218983.1| hypothetical protein COSY_0125 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166200323|sp|A5CXS1|RRMF_VESOH RecName: Full=Probable rRNA maturation factor
 gi|146326116|dbj|BAF61259.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 145

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/117 (47%), Positives = 71/117 (60%), Gaps = 2/117 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           +   EL +   D   I+ LN  YR  D+PTNVLSFPT           +LGD+V+  +I+
Sbjct: 31  KGESELLVRLVDEAEIQNLNKVYRYKDEPTNVLSFPTDL--PIEIDEKILGDVVICIQIV 88

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             E+    K F NHL+H+ +HG LHLLGYDH+D KDA  M  LER IL  +GIN+PY
Sbjct: 89  LKESIEQHKSFNNHLMHMAVHGTLHLLGYDHIDTKDAQNMANLERKILAKIGINNPY 145


>gi|289578131|ref|YP_003476758.1| hypothetical protein Thit_0920 [Thermoanaerobacter italicus Ab9]
 gi|289527844|gb|ADD02196.1| protein of unknown function UPF0054 [Thermoanaerobacter italicus
           Ab9]
          Length = 159

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 12/142 (8%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E +  K +  ++     +  + VE+S+ F D+  I  LN  YRGIDKPT+VLSFP A   
Sbjct: 18  EELVKKVIKTVLKVEEVI--DNVEVSVSFVDNEEIRKLNKYYRGIDKPTDVLSFPLAEFE 75

Query: 93  S----------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                      +      +GDIV++ E    ++   G  FE  + +L  H  LHLLGYDH
Sbjct: 76  ETYDKIEKIDQESEEVQPIGDIVISLEKALEQSMEYGHSFEREVAYLTAHSMLHLLGYDH 135

Query: 143 VDDKDACVMEGLERSILEDLGI 164
             +++  +M   E  I+  L I
Sbjct: 136 QTEEERKIMRQKEEEIMARLNI 157


>gi|238758021|ref|ZP_04619202.1| metalloprotease [Yersinia aldovae ATCC 35236]
 gi|238703775|gb|EEP96311.1| metalloprotease [Yersinia aldovae ATCC 35236]
          Length = 112

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 2/106 (1%)

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D      LN  YRG DK TNVLSFP  F +       +LGD+++  +++E EA    K  
Sbjct: 2   DDAESHELNLTYRGKDKSTNVLSFP--FEAPPEIELPLLGDLIICRQVVEQEAIEQEKAL 59

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             H  H+++HG LHLLGYDH+ D +A  ME +E  I++ LG  DPY
Sbjct: 60  LAHWAHMVVHGSLHLLGYDHIVDDEAEEMESIETEIMQSLGYPDPY 105


>gi|254671890|emb|CBA04156.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
 gi|308388724|gb|ADO31044.1| hypothetical protein NMBB_0581 [Neisseria meningitidis alpha710]
          Length = 251

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 112 AERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 167

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 168 EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 227

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 228 IMEAEEIRLMRAAGFPNPYQED 249


>gi|118497656|ref|YP_898706.1| hypothetical protein FTN_1065 [Francisella tularensis subsp.
           novicida U112]
 gi|194323628|ref|ZP_03057404.1| conserved hypothetical protein, putative [Francisella tularensis
           subsp. novicida FTE]
 gi|208779717|ref|ZP_03247061.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|145572751|sp|A0Q6T7|RRMF_FRATN RecName: Full=Probable rRNA maturation factor
 gi|118423562|gb|ABK89952.1| conserved protein of unknown function [Francisella novicida U112]
 gi|194321992|gb|EDX19474.1| conserved hypothetical protein, putative [Francisella tularensis
           subsp. novicida FTE]
 gi|208744172|gb|EDZ90472.1| conserved hypothetical protein [Francisella novicida FTG]
          Length = 162

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 38  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 98  NEAKEQNKELNDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 153


>gi|291484979|dbj|BAI86054.1| putative metalloprotease [Bacillus subtilis subsp. natto BEST195]
          Length = 157

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 18/161 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETL 70
           + I  E     +E            K V NL+  +      ++  E+S+    +  I  +
Sbjct: 5   IDIVDETGSVSEE----------LLKEVENLLQFAAEREGVQDQAEVSVTIVSNDDIHQI 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           N EYRG D PT+V+SF                   +LGDI+++ +    +A      F+ 
Sbjct: 55  NKEYRGKDAPTDVISFALEEEGEGEIEIVGAEMPPVLGDIIISADRTREQAEEYNHSFKR 114

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            L  L +HGFLHLLGYDH+  ++   M   ++ +L+  G+ 
Sbjct: 115 ELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLK 155


>gi|59799019|sp|Q63X65|RRMF_BURPS RecName: Full=Probable rRNA maturation factor
          Length = 184

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 35  PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 86

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 87  ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 142

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 143 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 184


>gi|261405613|ref|YP_003241854.1| hypothetical protein GYMC10_1764 [Paenibacillus sp. Y412MC10]
 gi|261282076|gb|ACX64047.1| protein of unknown function UPF0054 [Paenibacillus sp. Y412MC10]
          Length = 165

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 19/169 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + LQ+A     W +E     + E + A   + L   G        E+ L F D   I  L
Sbjct: 1   MSLQLA-----WNNEQEDFQIGEELIALLEAILQKAGEAEGVTDGEVDLTFVDDEGIHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLMLGDIVLAYEIIEIEAN 116
           N EYRGID+PT+VLSF     ++D                   +LGDI+++    ++++ 
Sbjct: 56  NREYRGIDRPTDVLSFAMNEITNDELEIIYELEEGEELESVPDVLGDIIISVPRAKLQSE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E  L  L +HGFLHLLGYDH D+     M G + ++L ++G+ 
Sbjct: 116 EYGHSLERELGFLFVHGFLHLLGYDHQDEASEAEMMGKQEAVLAEVGLT 164


>gi|217972291|ref|YP_002357042.1| putative metalloprotease [Shewanella baltica OS223]
 gi|254799938|sp|B8E6K8|RRMF_SHEB2 RecName: Full=Probable rRNA maturation factor
 gi|217497426|gb|ACK45619.1| protein of unknown function UPF0054 [Shewanella baltica OS223]
          Length = 153

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/159 (38%), Positives = 88/159 (55%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDL + +++A   D +      +  FA   +  I        +  EL++   DS   + L
Sbjct: 3   LDLALDIQHATTCDWLP----TDEQFALWATTAIGNSM----DEAELTIRIVDSRESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENEAREQQKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIEGLGFTDPYK 151


>gi|228960568|ref|ZP_04122217.1| metalloprotease [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229048022|ref|ZP_04193598.1| metalloprotease [Bacillus cereus AH676]
 gi|229111776|ref|ZP_04241324.1| metalloprotease [Bacillus cereus Rock1-15]
 gi|229129580|ref|ZP_04258550.1| metalloprotease [Bacillus cereus BDRD-Cer4]
 gi|229146888|ref|ZP_04275253.1| metalloprotease [Bacillus cereus BDRD-ST24]
 gi|229152503|ref|ZP_04280695.1| metalloprotease [Bacillus cereus m1550]
 gi|228631111|gb|EEK87748.1| metalloprotease [Bacillus cereus m1550]
 gi|228636716|gb|EEK93181.1| metalloprotease [Bacillus cereus BDRD-ST24]
 gi|228653897|gb|EEL09765.1| metalloprotease [Bacillus cereus BDRD-Cer4]
 gi|228671770|gb|EEL27066.1| metalloprotease [Bacillus cereus Rock1-15]
 gi|228723479|gb|EEL74848.1| metalloprotease [Bacillus cereus AH676]
 gi|228799168|gb|EEM46136.1| metalloprotease [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 154

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 34  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGL 152


>gi|313903261|ref|ZP_07836653.1| protein of unknown function UPF0054 [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466349|gb|EFR61871.1| protein of unknown function UPF0054 [Thermaerobacter subterraneus
           DSM 13965]
          Length = 177

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +    + +    V  L++         VE+SL F D   I+ LN  YRG D PT+V
Sbjct: 21  DRLAVPPHWDRLLPAVVGRLLAAEGLGVP--VEISLTFVDDVAIQELNRRYRGKDAPTDV 78

Query: 84  LSFPTAFASS---------------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           LSFP                      G   + LGD+V++ E    +A   G   +  + +
Sbjct: 79  LSFPQLEPDEVAALVRAPAVPAQVAPGPEPVPLGDVVISLERAAAQARDYGHSLDREVGY 138

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
           L+ HG LHLLGYDH D +    M     + L D G++ P
Sbjct: 139 LLAHGVLHLLGYDHPDAERERRMHEKAEAALADCGLSRP 177


>gi|30250260|ref|NP_842330.1| hypothetical protein NE2333 [Nitrosomonas europaea ATCC 19718]
 gi|46577433|sp|Q82SI9|RRMF_NITEU RecName: Full=Probable rRNA maturation factor
 gi|30181055|emb|CAD86245.1| Uncharacterized protein family UPF0054 [Nitrosomonas europaea ATCC
           19718]
          Length = 164

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/168 (34%), Positives = 79/168 (47%), Gaps = 15/168 (8%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           ++   V  P  + ++ +      D+  +      +F K V   +SK         E+ + 
Sbjct: 8   LTKNPVESPDHEQELVLTVQYVADKTDIPN--RRLFRKWVKAALSK-------PAEVVIR 58

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D    E LN ++RG    TNVL+F             +LGDIVL   +I  EA   GK
Sbjct: 59  IVDRQEGEILNRDFRGKSSATNVLTFVYDD------DVPLLGDIVLCAPVICNEAQQQGK 112

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +   H  HL IHG LHL GYDH+ D+DA VME LE  I+  LG  DPY
Sbjct: 113 DLTAHYAHLTIHGILHLQGYDHIRDEDAVVMESLETEIITRLGYPDPY 160


>gi|332799066|ref|YP_004460565.1| metalloprotease ybeY [Tepidanaerobacter sp. Re1]
 gi|332696801|gb|AEE91258.1| metalloprotease ybeY [Tepidanaerobacter sp. Re1]
          Length = 162

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 8/148 (5%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+I +    E +  KAV+  IS      +  +E+S+   D   I+ LN +YR +D+PT+V
Sbjct: 13  DKIDVTQKLEELINKAVNTAISVEKVSGD--LEVSIALVDDEYIQKLNRQYRSLDEPTDV 70

Query: 84  LSFPT------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           LSF           S +     +LGD+V++ E  + +A   G  FE  +  L++HG LHL
Sbjct: 71  LSFAMRETVFEEGGSFEFQEEELLGDVVISLERAKEQAVEYGHSFEREVGFLVVHGILHL 130

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH   ++  VM   E  IL+ + + 
Sbjct: 131 LGYDHEVGEEKVVMRQREEEILKAIDLT 158


>gi|296333310|ref|ZP_06875763.1| putative metalloprotease [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675185|ref|YP_003866857.1| putative metalloprotease [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149508|gb|EFG90404.1| putative metalloprotease [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413429|gb|ADM38548.1| putative metalloprotease [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 157

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 18/161 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETL 70
           + I  E     +E+           K V NL+  +      +N  E+S+    +  I+ +
Sbjct: 5   IDIVDETGSVSEEM----------LKEVENLLQFAAEREGVQNQAEVSVTIVTNEDIQQI 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD------GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           N EYRG D PT+V+SF                   +LGDI+++ +    +A      F+ 
Sbjct: 55  NKEYRGKDTPTDVISFALEEEGEGEVEIVGAEMPPVLGDIIISADRTREQAEEYNHSFKR 114

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            L  L +HGFLHLLGYDH+  ++   M   ++ +L+  G+ 
Sbjct: 115 ELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKDLLDAYGLK 155


>gi|241668688|ref|ZP_04756266.1| hypothetical protein FphipA2_07970 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 158

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEI 110
           +  E++L    +  I+ +N ++R  DKPTN++SF         +  +    GDIV+A E+
Sbjct: 36  SQAEVNLSIVSNQEIQQINKQFRHKDKPTNIISFEFEKPEGLPEDIADNFWGDIVIAPEV 95

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++ EA    K  ++H  H+ IHG LHLLGYDH+DD +A  ME LE  +L +LGI +PY
Sbjct: 96  LKKEAKEQNKNLDDHWQHIFIHGLLHLLGYDHIDDIEAEEMENLEIELLAELGIANPY 153


>gi|115314700|ref|YP_763423.1| hypothetical protein FTH_0870 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502302|ref|YP_001428367.1| hypothetical protein FTA_0935 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|290953584|ref|ZP_06558205.1| hypothetical protein FtulhU_04454 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313085|ref|ZP_06803775.1| hypothetical protein FtulhU_04439 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122325277|sp|Q0BM98|RRMF_FRATO RecName: Full=Probable rRNA maturation factor
 gi|171769928|sp|A7NBQ8|RRMF_FRATF RecName: Full=Probable rRNA maturation factor
 gi|115129599|gb|ABI82786.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156252905|gb|ABU61411.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 162

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 38  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH DD++A VME LE  +L  LGI +PY
Sbjct: 98  NEAKEQNKEINDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPY 153


>gi|315282362|ref|ZP_07870789.1| putative metalloprotease [Listeria marthii FSL S4-120]
 gi|313613994|gb|EFR87711.1| putative metalloprotease [Listeria marthii FSL S4-120]
          Length = 161

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E +   DE   + L E +         + GY   E   ELSL FT +  I  +
Sbjct: 4   LEIDLLDETSKLPDED--KELVENILQ------FAAGYLKIEQGTELSLTFTTNEGIREI 55

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF                 D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                L  L +HG LHLLGYDH++  +  VM GL++ +L+  G+ 
Sbjct: 116 TKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLE 160


>gi|149186038|ref|ZP_01864352.1| predicted metal-dependent hydrolase [Erythrobacter sp. SD-21]
 gi|148830069|gb|EDL48506.1| predicted metal-dependent hydrolase [Erythrobacter sp. SD-21]
          Length = 161

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/164 (41%), Positives = 87/164 (53%), Gaps = 12/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL I ++   W D        EV+  KA   +    + +    +  SL+FT   ++  L
Sbjct: 1   MDLDIEID--GWPDAED----WEVISQKAYEAIAQVEFALAHPRLTTSLLFTSEEQVHEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           N E+RG DKPTNVLSFP        A        MLGDI LA+E  + EA+  G    +H
Sbjct: 55  NKEWRGKDKPTNVLSFPMLERVDLIALEADGPPEMLGDIALAFETCQREADEKGVSVRDH 114

Query: 126 LVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
             HL+IHGFLHL G+DHVD D+ A  ME LE   L  LGI DPY
Sbjct: 115 TAHLLIHGFLHLAGHDHVDSDEQAAAMEKLEIEALAKLGIADPY 158


>gi|294501289|ref|YP_003564989.1| hypothetical protein BMQ_4551 [Bacillus megaterium QM B1551]
 gi|294351226|gb|ADE71555.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 156

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 37  AKAVSNLISKG--YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
            K +  L+     Y   +   E+S+ F D+ RI+ +N +YR  ++PT+V+SF       D
Sbjct: 19  QKELEKLLEAAAIYENLQENAEVSVTFVDNDRIQEINHQYRHKNQPTDVISFALEEMGED 78

Query: 95  GCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                      +LGDIV++      +A      F   L  L +HGFLHLLGYDH   +D 
Sbjct: 79  EMQIIGDELPRVLGDIVISIPKAHEQAEEYNHSFMRELGFLTVHGFLHLLGYDHETSEDE 138

Query: 149 CVMEGLERSILEDLGIN 165
             M   ++ ILE  G++
Sbjct: 139 KEMFTRQKDILEQYGLS 155


>gi|110681055|ref|YP_684062.1| hypothetical protein RD1_3919 [Roseobacter denitrificans OCh 114]
 gi|122972520|sp|Q161G7|RRMF_ROSDO RecName: Full=Probable rRNA maturation factor
 gi|109457171|gb|ABG33376.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 166

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/172 (37%), Positives = 88/172 (51%), Gaps = 18/172 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+ I +E+  W        +   V  + V   IS    +     E+S +  D  RI  L
Sbjct: 1   MDIDILIEDDRWA------AMDLDVLVRDVLRAISDTLTLDLAAAEVSYLACDDARIALL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASS------------DGCSSLMLGDIVLAYEIIEIEANVL 118
           N ++R     TNVLS+P A  +             D   +L LGD+ +AYE  E EA  L
Sbjct: 55  NADFREKATATNVLSWPAADLAPVVAGAVPTTPTVDVTGALTLGDVAIAYETCEREAADL 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           GK    H+ HLI+HG LHLLGYDH+ D DA +M+G+E  IL  +G +DPY V
Sbjct: 115 GKPLAEHVTHLIVHGTLHLLGYDHIRDSDAALMQGVEAKILGKMGFDDPYMV 166


>gi|187931464|ref|YP_001891448.1| hypothetical protein FTM_0691 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691552|sp|B2SG11|RRMF_FRATM RecName: Full=Probable rRNA maturation factor
 gi|187712373|gb|ACD30670.1| conserved hypothetical protein, putative [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 162

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 38  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLE 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGYDH  D++A VME LE  +L  LGI +PY
Sbjct: 98  NEAKEQNKELNDHWQHIFIHGLLHLLGYDHQGDQEAEVMENLEIQLLAQLGIANPY 153


>gi|325849563|ref|ZP_08170801.1| translation metalloprotein YbeY [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480044|gb|EGC83121.1| translation metalloprotein YbeY [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 154

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 12/158 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +++ ++N    D + L+   E V  + +     K   V E   E+SL F D  +I  LN 
Sbjct: 1   MKLIIDNTTNED-LTLQKDLEKVIKEVL-----KVENVDEKKCEISLSFVDEIKIRDLNK 54

Query: 73  EYRGIDKPTNVLSFPTAFASSD------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           ++RGID+ T+VLSFP     ++          LMLGD+V+  ++   +A  LG  FE  +
Sbjct: 55  DFRGIDRVTDVLSFPIEDFFNEDRKTLLEKPYLMLGDVVICTDVARKQAKELGHSFEREI 114

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++L  H  LHLLGYDH++D D  +M   E+ ++++LG+
Sbjct: 115 MYLTCHSILHLLGYDHMEDDDKKIMRSKEKQVMKNLGV 152


>gi|59799018|sp|Q62ML1|RRMF_BURMA RecName: Full=Probable rRNA maturation factor
 gi|145558842|sp|Q3JVV3|RRMF_BURP1 RecName: Full=Probable rRNA maturation factor
          Length = 184

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F        ++ F  +    
Sbjct: 35  PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIFSDTQF---TVRFVGADEGR 86

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 87  ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 142

Query: 129 LIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 143 LLVHGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 184


>gi|297544406|ref|YP_003676708.1| hypothetical protein Tmath_0963 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842181|gb|ADH60697.1| protein of unknown function UPF0054 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 159

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 12/142 (8%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E +  K +  ++     +  + VE+S+ F D+  +  LN  YRGIDKPT+VLSFP A   
Sbjct: 18  EELIEKVIKTVLEVEEVI--DNVEVSVSFVDNEEMRKLNKYYRGIDKPTDVLSFPLAEFE 75

Query: 93  S----------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                      +      +GDIV++ E    ++   G  FE  + +L  H  LHLLGYDH
Sbjct: 76  ETYDKIEKIDQESEEVQPIGDIVISLEKALEQSMEYGHSFEREVAYLTAHSMLHLLGYDH 135

Query: 143 VDDKDACVMEGLERSILEDLGI 164
             +++  +M   E  I+  L I
Sbjct: 136 QTEEERKIMRQKEEEIMARLNI 157


>gi|126175463|ref|YP_001051612.1| putative metalloprotease [Shewanella baltica OS155]
 gi|166229097|sp|A3D7N0|RRMF_SHEB5 RecName: Full=Probable rRNA maturation factor
 gi|125998668|gb|ABN62743.1| protein of unknown function UPF0054 [Shewanella baltica OS155]
          Length = 153

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 10/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LDL + +++A   D +      +  FA   +  I        +  EL++   D+   + L
Sbjct: 3   LDLALDIQHATTCDWLP----TDEQFALWATTAIGNSM----DEAELTIRIVDTRESQML 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YRG DKPTNVLSFP  F +       +LGD+V+   ++E EA    K  E H  H++
Sbjct: 55  NSTYRGKDKPTNVLSFP--FEAPPEIELPLLGDLVICAAVVENEAREQQKTLEAHWAHMV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           +HG LHLLGYDH++D++A  ME LE  ++E LG  DPY+
Sbjct: 113 VHGCLHLLGYDHIEDEEAEEMESLETQLIEGLGFTDPYK 151


>gi|33600341|ref|NP_887901.1| putative metalloprotease [Bordetella bronchiseptica RB50]
 gi|46577415|sp|Q7WMN5|RRMF_BORBR RecName: Full=Probable rRNA maturation factor
 gi|145559541|sp|Q7VZ88|RRMF_BORPE RecName: Full=Probable rRNA maturation factor
 gi|33567940|emb|CAE31853.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 157

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL L          LN E+RG D  TNVL+F        G   +  GDIV+   ++  EA
Sbjct: 46  ELGLRLVGLAEGRRLNREFRGRDYATNVLTFEY----GTGPDGVARGDIVVCVPVLAREA 101

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  HL +HG LH LGYDH+   +A  ME LE ++L  +GI DPY
Sbjct: 102 REQRKTLLDHAAHLTVHGTLHALGYDHIKAGEARRMEALETAVLARMGIADPY 154


>gi|114331764|ref|YP_747986.1| hypothetical protein Neut_1787 [Nitrosomonas eutropha C91]
 gi|122313486|sp|Q0AF61|RRMF_NITEC RecName: Full=Probable rRNA maturation factor
 gi|114308778|gb|ABI60021.1| protein of unknown function UPF0054 [Nitrosomonas eutropha C91]
          Length = 141

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 68/136 (50%), Gaps = 13/136 (9%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
             +F K V   ++K         E+ +        E LN ++RG D  TNVL+F  +   
Sbjct: 15  RQLFRKWVGAALNK-------PAEIVIRIVGMQEGEVLNRKFRGKDSATNVLTFVYSD-- 65

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  +LGDIVL   +I  EA    K+   H  HLI+HG LHL GYDH+ D+DA VME
Sbjct: 66  ----DVPLLGDIVLCAPVISREAEQQNKDLVAHYAHLIVHGVLHLQGYDHISDEDAVVME 121

Query: 153 GLERSILEDLGINDPY 168
            LE  I+  L   DPY
Sbjct: 122 SLETKIITRLNYPDPY 137


>gi|29653905|ref|NP_819597.1| hypothetical protein CBU_0567 [Coxiella burnetii RSA 493]
 gi|153208801|ref|ZP_01947028.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154706495|ref|YP_001424840.1| hypothetical metal-binding protein [Coxiella burnetii Dugway
           5J108-111]
 gi|161830561|ref|YP_001596496.1| hypothetical protein COXBURSA331_A0681 [Coxiella burnetii RSA 331]
 gi|165919083|ref|ZP_02219169.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii RSA
           334]
 gi|212212943|ref|YP_002303879.1| hypothetical metal-binding protein [Coxiella burnetii CbuG_Q212]
 gi|212218812|ref|YP_002305599.1| hypothetical metal-binding protein [Coxiella burnetii CbuK_Q154]
 gi|46577440|sp|Q83DX5|RRMF_COXBU RecName: Full=Probable rRNA maturation factor
 gi|189038728|sp|A9KCP4|RRMF_COXBN RecName: Full=Probable rRNA maturation factor
 gi|189040577|sp|A9NC56|RRMF_COXBR RecName: Full=Probable rRNA maturation factor
 gi|226701644|sp|B6J855|RRMF_COXB1 RecName: Full=Probable rRNA maturation factor
 gi|226701649|sp|B6J1A6|RRMF_COXB2 RecName: Full=Probable rRNA maturation factor
 gi|29541168|gb|AAO90111.1| hypothetical metal-binding protein [Coxiella burnetii RSA 493]
 gi|120575707|gb|EAX32331.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154355781|gb|ABS77243.1| hypothetical metal-binding protein [Coxiella burnetii Dugway
           5J108-111]
 gi|161762428|gb|ABX78070.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii RSA
           331]
 gi|165917217|gb|EDR35821.1| conserved hypothetical protein TIGR00043 [Coxiella burnetii RSA
           334]
 gi|212011353|gb|ACJ18734.1| hypothetical metal-binding protein [Coxiella burnetii CbuG_Q212]
 gi|212013074|gb|ACJ20454.1| hypothetical metal-binding protein [Coxiella burnetii CbuK_Q154]
          Length = 152

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/159 (36%), Positives = 77/159 (48%), Gaps = 11/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+Q A +        ++    E      V++         +N   L++ F D      L
Sbjct: 4   IDVQHATQFEDLPSLSNIEQWVETALQFIVTD---------KNKSALTIRFIDKEESTEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  YR    PTNVLSFP       G  S   GD+ +   ++  EA+   K  E H  HLI
Sbjct: 55  NEHYRHKKGPTNVLSFP--DEPIPGFPSESFGDLAICAPLVAEEAHAQHKTTEAHFAHLI 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HGFLHLLGYDHV+++DA  ME LE  IL  LG  +PYE
Sbjct: 113 THGFLHLLGYDHVENEDAEEMENLEIKILSQLGFENPYE 151


>gi|116872896|ref|YP_849677.1| putative metalloprotease [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466300|sp|A0AIR6|RRMF_LISW6 RecName: Full=Probable rRNA maturation factor
 gi|116741774|emb|CAK20898.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 161

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 18/168 (10%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +P L++ +  E     DE   + L E +         + GY   +   ELSL FT +  I
Sbjct: 1   MPVLEIDLLDETNKLLDED--KQLVENILQ------FAAGYLKIDEGTELSLTFTTNEGI 52

Query: 68  ETLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANV 117
             +N EYR  D+ T+V+SF              A  D  +  MLGDI+++ E  E +A  
Sbjct: 53  REINREYRNKDQATDVISFALEEMGEGETEIDWADFDLETPKMLGDIIISTEKAEEQAKD 112

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G      L  L +HG LHLLGYDH++  +  +M GL++ +L+  G+ 
Sbjct: 113 YGHTKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKEVLDAYGLE 160


>gi|221310456|ref|ZP_03592303.1| putative metalloprotease [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314779|ref|ZP_03596584.1| putative metalloprotease [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319702|ref|ZP_03600996.1| putative metalloprotease [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323979|ref|ZP_03605273.1| putative metalloprotease [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767580|ref|NP_390410.2| metalloprotease [Bacillus subtilis subsp. subtilis str. 168]
 gi|321312015|ref|YP_004204302.1| metal-binding heat shock protein [Bacillus subtilis BSn5]
 gi|251757429|sp|P46347|RRMF_BACSU RecName: Full=Probable rRNA maturation factor
 gi|225185208|emb|CAB14461.2| putative metal-dependent hydrolase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320018289|gb|ADV93275.1| metal-binding heat shock protein [Bacillus subtilis BSn5]
          Length = 157

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETL 70
           + I  E     +E+           K V NL+  +      ++  E+S+    +  I  +
Sbjct: 5   IDIVDETGSVSEEM----------LKEVENLLQFAAEREGVQDQAEVSVTIVSNDDIHQI 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           N EYRG D PT+V+SF                   +LGDI+++ +    +A      F+ 
Sbjct: 55  NKEYRGKDAPTDVISFALEEEGEGEIEIVGAEMPPVLGDIIISADRTREQAEEYNHSFKR 114

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            L  L +HGFLHLLGYDH+  ++   M   ++ +L+  G+ 
Sbjct: 115 ELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLK 155


>gi|33592182|ref|NP_879826.1| putative metalloprotease [Bordetella pertussis Tohama I]
 gi|33571827|emb|CAE41339.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332381599|gb|AEE66446.1| putative metalloprotease [Bordetella pertussis CS]
          Length = 149

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL L          LN E+RG D  TNVL+F        G   +  GDIV+   ++  EA
Sbjct: 38  ELGLRLVGLAEGRRLNREFRGRDYATNVLTFEY----GTGPDGVARGDIVVCVPVLAREA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  HL +HG LH LGYDH+   +A  ME LE ++L  +GI DPY
Sbjct: 94  REQRKTLLDHAAHLTVHGTLHALGYDHIKAGEARRMEALETAVLARMGIADPY 146


>gi|83589459|ref|YP_429468.1| hypothetical protein Moth_0595 [Moorella thermoacetica ATCC 39073]
 gi|123524940|sp|Q2RKW4|RRMF_MOOTA RecName: Full=Probable rRNA maturation factor
 gi|83572373|gb|ABC18925.1| Protein of unknown function UPF0054 [Moorella thermoacetica ATCC
           39073]
          Length = 156

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 6/113 (5%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAYEII 111
           SL   D   I+ LN  YRG+D PT+VLSF       D           +LGDI+++    
Sbjct: 42  SLTLVDDAAIKELNRTYRGVDAPTDVLSFALEEKGPDEPAYADPGGDKLLGDIIISVPTA 101

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +A   G      L  L +HGFLHLLGYDH     A  ME  + +IL  +G+
Sbjct: 102 VRQAGEYGHSLARELAFLAVHGFLHLLGYDHDTAAGAADMEARQEAILAGVGL 154


>gi|70726347|ref|YP_253261.1| hypothetical protein SH1346 [Staphylococcus haemolyticus JCSC1435]
 gi|123660334|sp|Q4L6S0|RRMF_STAHJ RecName: Full=Probable rRNA maturation factor
 gi|68447071|dbj|BAE04655.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 153

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLML 101
           +K         ELS+ F D + I+ +N  YR  DK T+V+SF       +        +L
Sbjct: 28  AKEQEQINEDAELSVTFVDKNEIQEINKTYRDKDKVTDVISFALEEDEPEIVGLDMPRVL 87

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI++   + E +A+  G  FE  L  L +HGFLHLLGYDH++++D  VM   + +IL  
Sbjct: 88  GDIIICTNVAEEQADSFGHSFERELGFLALHGFLHLLGYDHMNEEDEKVMFSRQDTILNA 147

Query: 162 LGIN 165
            G+ 
Sbjct: 148 YGLT 151


>gi|16800570|ref|NP_470838.1| putative metalloprotease [Listeria innocua Clip11262]
 gi|26006924|sp|Q92BP5|RRMF_LISIN RecName: Full=Probable rRNA maturation factor
 gi|16413975|emb|CAC96733.1| lin1502 [Listeria innocua Clip11262]
 gi|313618896|gb|EFR90761.1| putative metalloprotease [Listeria innocua FSL S4-378]
 gi|313623746|gb|EFR93888.1| putative metalloprotease [Listeria innocua FSL J1-023]
          Length = 161

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E     DE   + L E +         + GY   E   ELSL FT +  I+ +
Sbjct: 4   LEIDLLDETNNLPDED--KQLVENILQ------FAAGYLKIEEGTELSLTFTTNEGIQEI 55

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF                 D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRNKDQATDVISFALEEMGDGETEIDWGDFDLETPRMLGDIIISTEKAEEQAKDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                L  L +HG LHLLGYDH++  +  VM GL++ +L+  G+ 
Sbjct: 116 TKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLE 160


>gi|226311650|ref|YP_002771544.1| hypothetical protein BBR47_20630 [Brevibacillus brevis NBRC 100599]
 gi|254801535|sp|C0ZB81|RRMF_BREBN RecName: Full=Probable rRNA maturation factor
 gi|226094598|dbj|BAH43040.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 159

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L ++I  E     DE +L+ L       A          ++E   E+ +   ++ RI  
Sbjct: 1   MLSVEILHEEIEPIDE-NLQNLLVRCLEAAAK--------LEEVQGEVVVTLVNNERIHE 51

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANVL 118
           LN +YRG+D+PT+VLSF                        MLGDI+++      +A   
Sbjct: 52  LNRDYRGVDRPTDVLSFAMNEPGEGEMEIFIDEDEASEFPNMLGDIIISVPKAHEQAEDY 111

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G  FE  L  L +HGFLHLLGYDH   ++   M   +  +LE++G+ 
Sbjct: 112 GHSFERELGFLTVHGFLHLLGYDHGTPEEEKEMFSRQEKVLEEIGLT 158


>gi|159039362|ref|YP_001538615.1| putative metalloprotease [Salinispora arenicola CNS-205]
 gi|157918197|gb|ABV99624.1| protein of unknown function UPF0054 [Salinispora arenicola CNS-205]
          Length = 170

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 19/170 (11%)

Query: 2   SVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVF 61
           +       +L ++IA E+ +  D        + V A A   L   G      + ELS++ 
Sbjct: 5   AANYREGSQLSIEIANESGVDID-------TDAVLAVARHALDEMGV---NQLAELSVLL 54

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDIVLAYEIIE 112
            D   +  LN  + G D PT+VL+FP    S D         G    +LGDIVL  E+  
Sbjct: 55  VDIDYMAELNHRWMGGDGPTDVLAFPMDEGSVDHGPGESAVAGTEPALLGDIVLCPEVAA 114

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +A   G    + L  L +HG LHLLGYDH +  +   M  L+  +L   
Sbjct: 115 KQAATAGHSAADELHLLTVHGVLHLLGYDHAEPDEEREMFALQARLLAGW 164


>gi|187477342|ref|YP_785366.1| putative metalloprotease [Bordetella avium 197N]
 gi|123514086|sp|Q2KWD6|RRMF_BORA1 RecName: Full=Probable rRNA maturation factor
 gi|115421928|emb|CAJ48448.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 161

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
              EL++          LN ++RG D  TNVL+F               GDIV+   ++ 
Sbjct: 46  QAAELNVRLVGQAEGRRLNADFRGRDYATNVLTFEYGVDPL----GTARGDIVICAPVLA 101

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    K F +H  HL IHG LH LGYDH+  ++A  ME LE  IL  +GI DPY
Sbjct: 102 REAREQKKSFVDHATHLTIHGVLHALGYDHIKVREAKRMEALETRILARMGIADPY 157


>gi|326942085|gb|AEA17981.1| putative metalloprotease [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 156

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDENEMFGRQKEILEAFGL 154


>gi|205374159|ref|ZP_03226959.1| putative metalloprotease [Bacillus coahuilensis m4-4]
          Length = 158

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE       ++   + + +  +K   V +   E+SL F  + RI+ +N EYR  D+PT+V
Sbjct: 10  DETKEVAQDDLELVQEILHFAAKKEGVTQGS-EVSLTFVTNERIQQVNREYRDKDQPTDV 68

Query: 84  LSFPTAFASSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           +SF       +           +LGDI+++ E    +A+  G  F+  L  L +HGFLHL
Sbjct: 69  ISFALEEMDENEIRIIGEGIPRVLGDIIISVERTREQASEYGHSFQRELGFLALHGFLHL 128

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH++++D  VM   ++ IL++ G+ 
Sbjct: 129 LGYDHINEQDEKVMFQRQKDILDEFGLK 156


>gi|325127628|gb|EGC50544.1| hypothetical protein TIGR00043 [Neisseria meningitidis N1568]
          Length = 171

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +  GY       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKSGY----RRADISLILLDEEAARDYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
            +  C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  ETLPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY  D
Sbjct: 148 IMEAEEIRLMRAAGYPNPYRED 169


>gi|163791431|ref|ZP_02185840.1| hypothetical protein CAT7_03124 [Carnobacterium sp. AT7]
 gi|159873295|gb|EDP67390.1| hypothetical protein CAT7_03124 [Carnobacterium sp. AT7]
          Length = 158

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----------FASSD 94
           +  +       E+S+ F D+  I+ +N  YRG D+PT+V+SF             F   D
Sbjct: 27  AGKHIELPKDTEMSVTFVDNENIQKINKTYRGKDQPTDVISFAIEDEVEDELMINFDELD 86

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                 +GDI+++ +    +A      F+  L  L +HGFLHL GYDH++ +D   M GL
Sbjct: 87  EPMPRNIGDIIISVDKTASQAKEYNHSFDRELGFLALHGFLHLNGYDHMNPEDEKEMFGL 146

Query: 155 ERSILEDLGIN 165
           ++ ILE  G+ 
Sbjct: 147 QKEILEAYGLK 157


>gi|259500585|ref|ZP_05743487.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|302191276|ref|ZP_07267530.1| hypothetical protein LineA_04632 [Lactobacillus iners AB-1]
 gi|259167969|gb|EEW52464.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
          Length = 175

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   +     +   +  LI  +K    K N  E+S+ F D ++I  +N  YRG
Sbjct: 5   DISFNDEVDFLSDTRKNWKTWIEELILSAKKNIKKTNRQEMSINFVDINKIHEINKNYRG 64

Query: 77  IDKPTNVLSFPTAFASSDGCSSLML---------GDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF     + +   +  +         GD+ +  E++E  A      F     
Sbjct: 65  KDRPTDVISFAIEDGTDNDLFAQFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH+ D +A VM G++  +LE+ G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIKDDEAEVMFGIQSKVLEEYGLP 162


>gi|225018653|ref|ZP_03707845.1| hypothetical protein CLOSTMETH_02603 [Clostridium methylpentosum
           DSM 5476]
 gi|224948561|gb|EEG29770.1| hypothetical protein CLOSTMETH_02603 [Clostridium methylpentosum
           DSM 5476]
          Length = 168

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + + +   ++  +    +++   F ++   E+S+ F D+  I+ LN EYR  D PT+VLS
Sbjct: 15  VKIPSGIRLLVRRCCHAVLNHEGFSQD--AEVSVSFVDNADIQKLNSEYRQKDAPTDVLS 72

Query: 86  FPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP      F  ++   + +LGDIVL+ E    +A + G   +  + +L +H   HLLGYD
Sbjct: 73  FPLGENGEFDLNEETGAAVLGDIVLSMEKAYEQAEIYGHSLQREVAYLTVHSMFHLLGYD 132

Query: 142 HVDDK-DACVMEGLERSILEDLGIN 165
           H     +A  M   E ++L  LG+ 
Sbjct: 133 HEQGGLEAVRMREKEEAVLTSLGLP 157


>gi|54023400|ref|YP_117642.1| putative metalloprotease [Nocardia farcinica IFM 10152]
 gi|59799084|sp|Q5YZW3|RRMF_NOCFA RecName: Full=Probable rRNA maturation factor
 gi|54014908|dbj|BAD56278.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 184

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +   E  L ++   V  +   +             ELS+V  D   +  L
Sbjct: 1   MSIEIANESGIDVPEEDLVSVARFVIGRMDVH----------PAAELSMVLVDLDTMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP           S      MLGDIVL  E    +A+  G   E+
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDSPEPGPSMLGDIVLCPEFAADQAHKAGHSLEH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH + ++   M  L+  +LE+ 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPEEEKEMFALQARLLEEW 148


>gi|218666487|ref|YP_002425087.1| conserved hypothetical protein TIGR00043 [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218518700|gb|ACK79286.1| conserved hypothetical protein TIGR00043 [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 158

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/154 (37%), Positives = 77/154 (50%), Gaps = 2/154 (1%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +AV++ +    +  R        +A+S   S      + I ELSL F     +  LN  Y
Sbjct: 1   MAVDDVVAAMPLPPRGEVRRSILQALSA-PSARVSADDRIRELSLTFVGDAEMAALNEGY 59

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R    PTN LSFP   A        +LGDIV+A  ++  EA   GK   +H  HL+IH  
Sbjct: 60  RHKAAPTNCLSFPQD-ALPVLFRRDLLGDIVIAPAVVGREAAAQGKSLRDHYRHLLIHST 118

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           LHLLGYDH    DA  ME LE  +L ++G+ DPY
Sbjct: 119 LHLLGYDHELAADAQEMEALETRLLAEMGVADPY 152


>gi|228941468|ref|ZP_04104019.1| metalloprotease [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974399|ref|ZP_04134968.1| metalloprotease [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228980992|ref|ZP_04141295.1| metalloprotease [Bacillus thuringiensis Bt407]
 gi|228778783|gb|EEM27047.1| metalloprotease [Bacillus thuringiensis Bt407]
 gi|228785449|gb|EEM33459.1| metalloprotease [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228818249|gb|EEM64323.1| metalloprotease [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 154

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIV 105
           E+  E+S+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 34  EDGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLI 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++ ILE  G+
Sbjct: 94  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDENEMFGRQKEILEAFGL 152


>gi|150390781|ref|YP_001320830.1| hypothetical protein Amet_3031 [Alkaliphilus metalliredigens QYMF]
 gi|172052485|sp|A6TSK3|RRMF_ALKMQ RecName: Full=Probable rRNA maturation factor
 gi|149950643|gb|ABR49171.1| protein of unknown function UPF0054 [Alkaliphilus metalliredigens
           QYMF]
          Length = 155

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + + ++N     EI  + +  ++  KAV  + S  Y   +   E+SL F  +  I+ L
Sbjct: 1   MPVSLVIDNRQKQVEIEQKLI--MLLEKAV--ITSLAYEGWDPDYEVSLSFVSNKEIQNL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N  YRG D  T+VLSFP    +         +LGD+V++ E    +A      FE  +  
Sbjct: 57  NRTYRGKDYATDVLSFPLVDDTDGFPMGEEKLLGDVVISVEKAVEQAKEYQHSFEREMGF 116

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           L++H   HL+GYDH+++ +A  M   E  +L ++G+
Sbjct: 117 LMVHSLFHLMGYDHLEETEAQEMRKREEIVLTEMGL 152


>gi|238924118|ref|YP_002937634.1| hypothetical protein EUBREC_1756 [Eubacterium rectale ATCC 33656]
 gi|259646480|sp|C4ZA59|RRMF_EUBR3 RecName: Full=Probable rRNA maturation factor
 gi|238875793|gb|ACR75500.1| hypothetical protein EUBREC_1756 [Eubacterium rectale ATCC 33656]
          Length = 165

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 18/157 (11%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E +     E V    VS  +    F  E   E++L  TD+  I  +N EYR ID+PT+VL
Sbjct: 10  ECNFNFDYEKVAEAVVSASLEHENFPYE--AEVNLTLTDNEGIHAINKEYRQIDRPTDVL 67

Query: 85  SFPT----------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           SFP                     +     +MLGDI+++ + ++ +A   G   +     
Sbjct: 68  SFPMLSYETPGDFSFLSDENEDDFNPDTGEVMLGDIIISVDKVKEQAVEYGHSEKREFAF 127

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LI H  LHL GYDH++  +A VME  +R IL+ LGI 
Sbjct: 128 LITHSMLHLFGYDHMEADEAAVMEEHQRKILDALGIT 164


>gi|182678043|ref|YP_001832189.1| hypothetical protein Bind_1057 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|238691235|sp|B2IIK7|RRMF_BEII9 RecName: Full=Probable rRNA maturation factor
 gi|182633926|gb|ACB94700.1| protein of unknown function UPF0054 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 205

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 6/159 (3%)

Query: 13  LQIAVENALW---GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + IAVE+  W   G+E       + +   A+   +++         E+SL+F D   I  
Sbjct: 5   IDIAVESPRWTEAGNEGEDPLSLDALVEAAIGAAVARAGIALHAEAEVSLLFCDDAFIRG 64

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN ++RG+DKPTNVLSFP+     D     +LGDI++A+E    EA    K    H+ HL
Sbjct: 65  LNHQWRGLDKPTNVLSFPSDEDLEDA---RLLGDIIIAFETSAGEAKAEAKSLAAHVSHL 121

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           ++HGFLHL+GYDH + ++A  ME +E+ IL DLGI DPY
Sbjct: 122 VVHGFLHLIGYDHEEAEEAEEMERMEQVILADLGIADPY 160


>gi|309803146|ref|ZP_07697243.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           11V1-d]
 gi|325912150|ref|ZP_08174548.1| translation metalloprotein YbeY [Lactobacillus iners UPII 143-D]
 gi|308164654|gb|EFO66904.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           11V1-d]
 gi|325476100|gb|EGC79268.1| translation metalloprotein YbeY [Lactobacillus iners UPII 143-D]
          Length = 175

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+         +   +  LI  +K    K N  E+S+ F D ++I  +N  YRG
Sbjct: 5   DISFNDEVDFLNDTRKNWKTWIEELILSAKKNIKKTNRQEMSINFVDINKIHEINKNYRG 64

Query: 77  IDKPTNVLSFPTAFASSDGCSSLML---------GDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF     + +   +  +         GD+ +  E++E  A      F     
Sbjct: 65  KDRPTDVISFAIEDGTDNDLFAQFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH+ D +A VM G++  +LE+ G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIKDDEAEVMFGIQSKVLEEYGLP 162


>gi|260438417|ref|ZP_05792233.1| putative metalloprotease [Butyrivibrio crossotus DSM 2876]
 gi|292809003|gb|EFF68208.1| putative metalloprotease [Butyrivibrio crossotus DSM 2876]
          Length = 166

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 21/155 (13%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +I   T+ + V   A+       Y       E+SL  TD+  I  +N E+R ID+PT+VL
Sbjct: 14  DIDYETIADKVINAALD------YEKCPYEAEVSLTLTDNKGIHDINKEFRNIDRPTDVL 67

Query: 85  SFPTAFASSDG---------------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           SFP     + G                  LMLGDIV++ + +E +A   G         L
Sbjct: 68  SFPMVEYETPGEFDFLENEYDCFNPETGELMLGDIVISLDKVEEQAANYGHSVTREYAFL 127

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           I H  LHL+GYDH+++ DA  ME  +  ILE LGI
Sbjct: 128 IAHSMLHLMGYDHMEENDAKEMERRQAEILESLGI 162


>gi|33595813|ref|NP_883456.1| putative metalloprotease [Bordetella parapertussis 12822]
 gi|46577410|sp|Q7WB68|RRMF_BORPA RecName: Full=Probable rRNA maturation factor
 gi|33565892|emb|CAE36440.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 157

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 4/113 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL L          LN E+RG D  TNVL+F        G   +  GDIV+   ++  EA
Sbjct: 46  ELGLRLVGLAEGRRLNREFRGRDYATNVLTFEY----GTGPDGVARGDIVVCVPVLAREA 101

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               K   +H  HL +HG LH LGYDH+   +A  ME LE  +L  +GI DPY
Sbjct: 102 REQRKTLLDHAAHLTVHGTLHALGYDHIKAGEARRMEALETVVLARMGIADPY 154


>gi|219670284|ref|YP_002460719.1| hypothetical protein Dhaf_4278 [Desulfitobacterium hafniense DCB-2]
 gi|254803892|sp|B8FUL3|RRMF_DESHD RecName: Full=Probable rRNA maturation factor
 gi|219540544|gb|ACL22283.1| protein of unknown function UPF0054 [Desulfitobacterium hafniense
           DCB-2]
          Length = 157

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 11/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+    ++    +   L  L E   AKAV          +    E+SL   D  RI  L
Sbjct: 3   LDINWEEDSIPENERGSLTGLLEQGIAKAVH------LSAESEEAEVSLTLVDDARIHEL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYEIIEIEANVLGKEFENH 125
           N +YRG+D+PT+VLSF      SD    L     +LGDI+++ E    +A   G  FE  
Sbjct: 57  NRDYRGVDRPTDVLSFALQEERSDEPDILDYEDHLLGDIIISVERARAQAIDYGHSFERE 116

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           LV+L +HG LHLLGYDH++++D   M   E +++  +G+
Sbjct: 117 LVYLAVHGTLHLLGYDHMEEEDKEEMRRQEEAVMSQIGL 155


>gi|254461073|ref|ZP_05074489.1| conserved hypothetical protein TIGR00043 [Rhodobacterales bacterium
           HTCC2083]
 gi|206677662|gb|EDZ42149.1| conserved hypothetical protein TIGR00043 [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 162

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 16/162 (9%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E++ W   + L TL E    K ++ L      +   + E++++  D  RI  LN E+R 
Sbjct: 7   IEDSRWQT-VDLATLAETAARKTLTQLD-----LDPTVFEIAILACDDTRIAELNTEFRD 60

Query: 77  IDKPTNVLSFPTAFASSDGCSSLM----------LGDIVLAYEIIEIEANVLGKEFENHL 126
              PTNVLS+P+   +SD   +            LGDI ++Y+    EA    K   +H 
Sbjct: 61  KPTPTNVLSWPSDERASDIDGARPEKPVLPMDAELGDIAISYDTCAREAQSANKPLTDHT 120

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            HLIIHG LHLLGYDH+ D DA +ME  E  IL  LG++ PY
Sbjct: 121 THLIIHGVLHLLGYDHIRDLDATLMEQTEVLILGTLGVDTPY 162


>gi|217964389|ref|YP_002350067.1| hypothetical protein LMHCC_1105 [Listeria monocytogenes HCC23]
 gi|290894226|ref|ZP_06557195.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|254799939|sp|B8DE46|RRMF_LISMH RecName: Full=Probable rRNA maturation factor
 gi|217333659|gb|ACK39453.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
 gi|290556223|gb|EFD89768.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307571046|emb|CAR84225.1| metal-dependent hydrolase family protein [Listeria monocytogenes
           L99]
          Length = 161

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E     DE   + L E +         +  Y   E   ELSL FT +  I  +
Sbjct: 4   LEIDLLDETKKLPDED--KQLVENILQ------FAAEYLKIEQGTELSLTFTTNEGIREI 55

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF                 D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                L  L +HG LHLLGYDH++  +  VM GL++ +L+  G+ 
Sbjct: 116 TKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLE 160


>gi|325290529|ref|YP_004266710.1| metalloprotease ybeY [Syntrophobotulus glycolicus DSM 8271]
 gi|324965930|gb|ADY56709.1| metalloprotease ybeY [Syntrophobotulus glycolicus DSM 8271]
          Length = 168

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 20/171 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L I  E      +   +   EV+ A+ ++  + +    +    E+ ++FTD+  I  L
Sbjct: 1   MELDITWEEPSISPQE--KAGWEVLIAQGITRALQEAEGPENG--EIGVLFTDNETIRGL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS----------------SLMLGDIVLAYEIIEIE 114
           N +YRGID PT+VLSF     + +                     MLGDIV++ +    +
Sbjct: 57  NRDYRGIDNPTDVLSFALQEKTEEEPDIYFHHDEDQDDGFPDLGAMLGDIVISVQRAREQ 116

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           A   G   E  +V L +HG LHLLGYDH  ++    M  LE  I+E +G+ 
Sbjct: 117 AAEYGHSLEREIVFLAVHGTLHLLGYDHQTEEQRSGMRELEERIMEKIGLA 167


>gi|309806598|ref|ZP_07700595.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           03V1-b]
 gi|312872992|ref|ZP_07733052.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2062A-h1]
 gi|312874169|ref|ZP_07734203.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2052A-d]
 gi|315653579|ref|ZP_07906499.1| metal-dependent hydrolase [Lactobacillus iners ATCC 55195]
 gi|308167018|gb|EFO69200.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           03V1-b]
 gi|311090239|gb|EFQ48649.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2052A-d]
 gi|311091514|gb|EFQ49898.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2062A-h1]
 gi|315488941|gb|EFU78583.1| metal-dependent hydrolase [Lactobacillus iners ATCC 55195]
          Length = 175

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   +     +   +  LI  +K    K N  E+S+ F D ++I  +N  YRG
Sbjct: 5   DISFNDEVDFFSDTRKNWKTWIEELILSAKKNIKKTNRQEMSINFVDINKIHEINKNYRG 64

Query: 77  IDKPTNVLSFPTAFASSDGCSSLML---------GDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF     + +   +  +         GD+ +  E++E  A      F     
Sbjct: 65  KDRPTDVISFAIEDGTDNDLFAQFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH+ D +A VM G++  +LE+ G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIKDDEAEVMFGIQSKVLEEYGLP 162


>gi|260427895|ref|ZP_05781874.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260422387|gb|EEX15638.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 159

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 7/126 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-------SLMLG 102
           +  +  E++++  D  RI  LN ++R    PTNVLS+P+     +             LG
Sbjct: 34  LDPDGFEIAILACDDARIAELNGDFRDKPAPTNVLSWPSEERDPEDLPEPGMPGMPEELG 93

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI +A+E    EA    K    HL HLI+H  LHLLGYDH+ D+DA VME LE  IL  L
Sbjct: 94  DIAIAWETCLREAQEQNKPLSAHLTHLIVHATLHLLGYDHIRDEDATVMETLEVEILGKL 153

Query: 163 GINDPY 168
           G+ +PY
Sbjct: 154 GVANPY 159


>gi|65321675|ref|ZP_00394634.1| COG0319: Predicted metal-dependent hydrolase [Bacillus anthracis
           str. A2012]
          Length = 156

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIV 105
           E+  ELS+ F D+ RI  +N +YR  D+PT+V+SF                   MLGD++
Sbjct: 36  EDGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLI 95

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++    + +A   G  F+  L  L +HGFLHLLGYDH+ ++D   M G ++  LE  G+
Sbjct: 96  ISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEXLEAFGL 154


>gi|37520812|ref|NP_924189.1| putative metalloprotease [Gloeobacter violaceus PCC 7421]
 gi|46577366|sp|Q7NL83|RRMF_GLOVI RecName: Full=Probable rRNA maturation factor
 gi|35211807|dbj|BAC89184.1| gll1243 [Gloeobacter violaceus PCC 7421]
          Length = 194

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 15/158 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L +Q AV++ +           +  F + +  L S G       VEL+L  TD   I  
Sbjct: 38  ELCIQAAVDDPVG------EARWQSWFDQWLLELQSAG------AVELTLRLTDDAEIRR 85

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGC---SSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN  +RG+D PT+VLSF      +        L LGDIV++      +A   G   E  L
Sbjct: 86  LNARFRGVDAPTDVLSFEFEADDTQALIAEEPLYLGDIVVSVPTATRQAREFGHTLEVEL 145

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             L +HG LHLLG+DH D++    M   +  +L+ + +
Sbjct: 146 AWLAVHGLLHLLGWDHPDEQSWRAMVTQQARLLKGVNV 183


>gi|167037777|ref|YP_001665355.1| putative metalloprotease [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039983|ref|YP_001662968.1| putative metalloprotease [Thermoanaerobacter sp. X514]
 gi|256751971|ref|ZP_05492841.1| protein of unknown function UPF0054 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300914073|ref|ZP_07131389.1| protein of unknown function UPF0054 [Thermoanaerobacter sp. X561]
 gi|307724694|ref|YP_003904445.1| hypothetical protein Thet_1564 [Thermoanaerobacter sp. X513]
 gi|320116192|ref|YP_004186351.1| hypothetical protein Thebr_1395 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|238687637|sp|B0K706|RRMF_THEPX RecName: Full=Probable rRNA maturation factor
 gi|238687667|sp|B0KA56|RRMF_THEP3 RecName: Full=Probable rRNA maturation factor
 gi|166854223|gb|ABY92632.1| protein of unknown function UPF0054 [Thermoanaerobacter sp. X514]
 gi|166856611|gb|ABY95019.1| protein of unknown function UPF0054 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256749176|gb|EEU62210.1| protein of unknown function UPF0054 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300889008|gb|EFK84154.1| protein of unknown function UPF0054 [Thermoanaerobacter sp. X561]
 gi|307581755|gb|ADN55154.1| protein of unknown function UPF0054 [Thermoanaerobacter sp. X513]
 gi|319929283|gb|ADV79968.1| protein of unknown function UPF0054 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 159

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D I+L  L E V    +            + VE+S+ F D+  I  LN  YRGIDKPT+V
Sbjct: 13  DAINLEELVEKVIKTVLE------VEEVIDNVEVSVSFVDNEEIRKLNKYYRGIDKPTDV 66

Query: 84  LSFPTAFASS----------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           LSFP A              D      +GDIV++ E    ++   G  FE  + +L  H 
Sbjct: 67  LSFPLAEFEDTYGEVEEIEEDSEEVQPIGDIVISLEKALEQSMEYGHSFEREVAYLTAHS 126

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHLLGYDH  +++  +M   E  ++  L I
Sbjct: 127 MLHLLGYDHETEEERKIMREKEEEVMARLNI 157


>gi|257884086|ref|ZP_05663739.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257819924|gb|EEV47072.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
          Length = 158

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+    E     +E        + FA          Y       E+S+ F D+  I+ +
Sbjct: 1   MDITFMDETNQVSEEKMKEIDDLLQFAA--------SYLKLPEETEMSVTFMDNATIQVI 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS----------SLMLGDIVLAYEIIEIEANVLGK 120
           N +YRG D PT+V+SF       D               +LGDI+++ E    +A   G 
Sbjct: 53  NRDYRGKDAPTDVISFALEEEGEDEIPVIFEDGENPLPRVLGDIMISIERAAEQAEAYGH 112

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+ 
Sbjct: 113 SYDRELGFLAVHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGLK 157


>gi|291612931|ref|YP_003523088.1| hypothetical protein Slit_0460 [Sideroxydans lithotrophicus ES-1]
 gi|291583043|gb|ADE10701.1| protein of unknown function UPF0054 [Sideroxydans lithotrophicus
           ES-1]
          Length = 152

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 21/158 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L +Q A            R   +                  E  V++SL   +     TL
Sbjct: 13  LSVQYASNAGKLPTRQQFRRWAKAAL---------------ERDVQISLRLVNEAEGRTL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++RG D  TNVL+F             + GD+V+   ++  EA   GK+   H  HL+
Sbjct: 58  NRDFRGKDYATNVLTFVYDDTVP------LSGDVVICVPVVAREAKEQGKDLFAHYAHLV 111

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IH  LHL GYDH   +DA  ME  E +++  L    PY
Sbjct: 112 IHAVLHLQGYDHEKKRDAEKMEARETALMLKLRYPAPY 149


>gi|311742996|ref|ZP_07716804.1| cupin domain protein [Aeromicrobium marinum DSM 15272]
 gi|311313676|gb|EFQ83585.1| cupin domain protein [Aeromicrobium marinum DSM 15272]
          Length = 158

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 20/166 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ +  E+ +  D + L  LC  V  +                 EL+L   D+  I  L
Sbjct: 1   MNVDVLNESGVEADVLDLTRLCRFVMRRM----------RLHPATELTLRLVDADTIAVL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           N ++ G D PT+VLSFP          +      LGDI L  ++ E +A   G    + +
Sbjct: 51  NRQWMGKDGPTDVLSFPMDELTPGRDDEESPEGYLGDIALCPQVAEQQAPAAGHTTADEV 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL-----EDLGINDP 167
             L +HG LHLLGYDH +  +   M GL+  +L       LG+ DP
Sbjct: 111 DLLTVHGILHLLGYDHAEPDEHREMFGLQGRLLVEWQRAALGL-DP 155


>gi|134302076|ref|YP_001122045.1| hypothetical protein FTW_1112 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|166228884|sp|A4IYC3|RRMF_FRATW RecName: Full=Probable rRNA maturation factor
 gi|134049853|gb|ABO46924.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 162

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIE 112
            E++L    +  I+ +N ++R  DKPTN++SF         D  ++  LGDIV+A  ++E
Sbjct: 38  AEVNLNIVSNDEIQQINKQFRNKDKPTNIISFKFEKPQGLPDDIANDFLGDIVIAPAVLE 97

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    KE  +H  H+ IHG LHLLGY+H DD++A VME LE  +L  LGI +PY
Sbjct: 98  NEAKEQNKELNDHWQHIFIHGLLHLLGYNHQDDQEAEVMENLEIQLLAQLGIANPY 153


>gi|223044370|ref|ZP_03614404.1| conserved hypothetical protein [Staphylococcus capitis SK14]
 gi|314933742|ref|ZP_07841107.1| putative metalloprotease [Staphylococcus caprae C87]
 gi|222442239|gb|EEE48350.1| conserved hypothetical protein [Staphylococcus capitis SK14]
 gi|313653892|gb|EFS17649.1| putative metalloprotease [Staphylococcus caprae C87]
          Length = 156

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-----SL 99
           +K     ++  ELS+ F D   I+ +N  YR  DK T+V+SF       +          
Sbjct: 28  AKKQEHIDSEAELSVTFVDKDEIQNINKMYRDKDKVTDVISFALEEDEPEIDMNELDIPR 87

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +LGDI++  ++   +A   G  FE  L  L +HGFLHLLGYDH+ D+D   M G + +IL
Sbjct: 88  VLGDIIICTDVAHEQAENYGHSFERELGFLALHGFLHLLGYDHMTDEDEKEMFGRQDAIL 147

Query: 160 EDLGIN 165
              G+ 
Sbjct: 148 NAYGLT 153


>gi|89895855|ref|YP_519342.1| hypothetical protein DSY3109 [Desulfitobacterium hafniense Y51]
 gi|122481904|sp|Q24SU4|RRMF_DESHY RecName: Full=Probable rRNA maturation factor
 gi|89335303|dbj|BAE84898.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 157

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 11/159 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD+    ++    +   L  L E   AKAV          +    E+SL   D  RI  L
Sbjct: 3   LDINWEEDSIPENERGSLTGLLEQGIAKAVH------LSAESEEAEVSLTLVDDARIHEL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYEIIEIEANVLGKEFENH 125
           N +YRG+D+PT+VLSF      SD    L     +LGDI+++ E    +A   G  FE  
Sbjct: 57  NRDYRGVDRPTDVLSFALQEERSDEPDILDYEDHLLGDIIISVERARAQAIDYGHSFERE 116

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           LV+L +HG LHLLGYDH+++ D   M   E +++  +G+
Sbjct: 117 LVYLAVHGTLHLLGYDHMEEADKEKMRRQEEAVMSQIGL 155


>gi|114798379|ref|YP_758839.1| hypothetical protein HNE_0105 [Hyphomonas neptunium ATCC 15444]
 gi|123129252|sp|Q0C604|RRMF_HYPNA RecName: Full=Probable rRNA maturation factor
 gi|114738553|gb|ABI76678.1| conserved hypothetical protein TIGR00043 [Hyphomonas neptunium ATCC
           15444]
          Length = 150

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 12/162 (7%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +   + VE+  W     L  LC   F  A        Y        ++L+  D+H +  
Sbjct: 1   MISFDLIVEDDSWAALGDLEALCRKAFDAA-------EYVAPVEEGNIALLLADNHVLHQ 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN ++R  DKPT+VLSFP+            LGDI +A+ +   +A + GK  + HLVHL
Sbjct: 54  LNLDFRSKDKPTDVLSFPSL-----PMDRPFLGDIAVAWGVSASDAKIQGKPLDAHLVHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +IHG+LHLLG+DH  D +A  ME LE   L  L I +PY  D
Sbjct: 109 LIHGYLHLLGFDHETDDEAAEMEALEIKALASLDIANPYRND 150


>gi|69247283|ref|ZP_00604284.1| Protein of unknown function UPF0054 [Enterococcus faecium DO]
 gi|257879928|ref|ZP_05659581.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257890443|ref|ZP_05670096.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257893049|ref|ZP_05672702.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|258616605|ref|ZP_05714375.1| putative metalloprotease [Enterococcus faecium DO]
 gi|260559562|ref|ZP_05831742.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|261208626|ref|ZP_05923063.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289566735|ref|ZP_06447149.1| metalloprotease [Enterococcus faecium D344SRF]
 gi|293556348|ref|ZP_06674929.1| conserved hypothetical protein [Enterococcus faecium E1039]
 gi|293559426|ref|ZP_06675965.1| conserved hypothetical protein [Enterococcus faecium E1162]
 gi|294616316|ref|ZP_06696109.1| hypothetical protein EfmE1636_2374 [Enterococcus faecium E1636]
 gi|294618706|ref|ZP_06698239.1| conserved hypothetical protein [Enterococcus faecium E1679]
 gi|314939542|ref|ZP_07846770.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133a04]
 gi|314942703|ref|ZP_07849529.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133C]
 gi|314948959|ref|ZP_07852325.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0082]
 gi|314953306|ref|ZP_07856234.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133A]
 gi|314993386|ref|ZP_07858751.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133B]
 gi|314995736|ref|ZP_07860825.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133a01]
 gi|68194905|gb|EAN09375.1| Protein of unknown function UPF0054 [Enterococcus faecium DO]
 gi|257814156|gb|EEV42914.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257826803|gb|EEV53429.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257829428|gb|EEV56035.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260074230|gb|EEW62552.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|260077128|gb|EEW64848.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289161456|gb|EFD09342.1| metalloprotease [Enterococcus faecium D344SRF]
 gi|291590830|gb|EFF22546.1| hypothetical protein EfmE1636_2374 [Enterococcus faecium E1636]
 gi|291595049|gb|EFF26393.1| conserved hypothetical protein [Enterococcus faecium E1679]
 gi|291601415|gb|EFF31686.1| conserved hypothetical protein [Enterococcus faecium E1039]
 gi|291606640|gb|EFF36035.1| conserved hypothetical protein [Enterococcus faecium E1162]
 gi|313590008|gb|EFR68853.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133a01]
 gi|313592051|gb|EFR70896.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133B]
 gi|313594649|gb|EFR73494.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133A]
 gi|313598568|gb|EFR77413.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133C]
 gi|313641178|gb|EFS05758.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0133a04]
 gi|313644618|gb|EFS09198.1| conserved hypothetical protein TIGR00043 [Enterococcus faecium
           TX0082]
          Length = 158

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+    E     +E        + FA          Y       E+S+ F D+  I+ +
Sbjct: 1   MDITFMDETNQVSEEKMKEIDDLLQFAA--------SYLKLPEETEMSVTFMDNAAIQVI 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS----------SLMLGDIVLAYEIIEIEANVLGK 120
           N +YRG D PT+V+SF       D               +LGDI+++ E    +A   G 
Sbjct: 53  NRDYRGKDAPTDVISFALEEEGEDEIPVIFEDGENPLPRVLGDIMISIERAAEQAEAYGH 112

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+ 
Sbjct: 113 SYDRELGFLAVHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGLK 157


>gi|291524855|emb|CBK90442.1| conserved hypothetical protein TIGR00043 [Eubacterium rectale DSM
           17629]
 gi|291528996|emb|CBK94582.1| conserved hypothetical protein TIGR00043 [Eubacterium rectale
           M104/1]
          Length = 165

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 18/157 (11%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E +     E V    VS  +    F  E   E++L  TD+  I  +N EYR ID+PT+VL
Sbjct: 10  ECNFNFDYEKVAEAVVSASLEHESFPYE--AEVNLTLTDNEGIHAINKEYRQIDRPTDVL 67

Query: 85  SFPT----------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           SFP                     +     +MLGDI+++ + ++ +A   G   +     
Sbjct: 68  SFPMLSYETPGDFSFISDENEDDFNPDTGEVMLGDIIISVDKVKEQALEYGHSEKREFAF 127

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LI H  LHL GYDH++  +A VME  +R IL+ LGI 
Sbjct: 128 LITHSMLHLFGYDHMEADEAAVMEEHQRKILDALGIT 164


>gi|260494090|ref|ZP_05814221.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|260198236|gb|EEW95752.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
          Length = 163

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 1/131 (0%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  ++          + LSL+ TD+  I+ +N EYR  D PT+V+SF             
Sbjct: 33  IKKVLELEEIESNRPLYLSLLLTDNRNIQVINREYRDKDAPTDVISFAYHETEDFNIGPY 92

Query: 100 M-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++ E +E +A+     FE    +++ HG LH+LGYDH++++D  +M   E +I
Sbjct: 93  DTLGDIIISLERVEEQASEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKIMREREEAI 152

Query: 159 LEDLGINDPYE 169
           L   G    Y+
Sbjct: 153 LSSFGYTRDYK 163


>gi|317056498|ref|YP_004104965.1| hypothetical protein Rumal_1833 [Ruminococcus albus 7]
 gi|315448767|gb|ADU22331.1| protein of unknown function UPF0054 [Ruminococcus albus 7]
          Length = 170

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 7/146 (4%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E+ +     ++  +    ++    F K+   E+S+ F +  +I  LN E+R ID+PT+VL
Sbjct: 14  EVKIPVGIRMLVRRCCHAVLEYEEFGKD--AEVSVSFVNDKQIHELNKEHRDIDRPTDVL 71

Query: 85  SFPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           SFP      +  +    + +LGDIV++ E    +A V G   E  +  L +H  LHLLGY
Sbjct: 72  SFPLGENGEYDVNYESGACLLGDIVISLETATRQAQVYGHSLEREVGFLTVHSMLHLLGY 131

Query: 141 DHVDDK-DACVMEGLERSILEDLGIN 165
           DH +      +M   E +IL  LGI+
Sbjct: 132 DHEESSLQERIMREKEEAILAQLGIS 157


>gi|160896671|ref|YP_001562253.1| hypothetical protein Daci_1224 [Delftia acidovorans SPH-1]
 gi|238687183|sp|A9BUG5|RRMF_DELAS RecName: Full=Probable rRNA maturation factor
 gi|160362255|gb|ABX33868.1| protein of unknown function UPF0054 [Delftia acidovorans SPH-1]
          Length = 152

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 15/159 (9%)

Query: 13  LQIAVENALWGD-EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           LQ++++ A + +  +H   L      + + + ++          E+++   D+   + LN
Sbjct: 6   LQLSLQFARFAEAPVHRAVLSRSKVTRWIRHALAV-------DAEITVRIVDAEEGQQLN 58

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
            EYR  D  TNVL+F              + D+VL   ++E EA    K  E H  HL++
Sbjct: 59  REYRQKDYATNVLTFDYQQ------EPTAMADLVLCAPVVEREAREQNKTLEEHYAHLLV 112

Query: 132 HGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           HG LH  G+DH   ++DA  ME  E  I+ +LG  DPY 
Sbjct: 113 HGTLHAQGWDHETSEQDAEEMEAYETEIMVELGFADPYA 151


>gi|319940869|ref|ZP_08015208.1| hypothetical protein HMPREF9464_00427 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805751|gb|EFW02532.1| hypothetical protein HMPREF9464_00427 [Sutterella wadsworthensis
           3_1_45B]
          Length = 152

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 6/119 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           E   E ++ F D      LN ++R  D  TNVL+F            +++ DIV+   ++
Sbjct: 33  ELDGEFTVRFVDEEEGRELNHQFRRKDYATNVLTFDYQR------EPVVMADIVICPAVL 86

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           E +A    K   +HL HL+IHG LH  GYDH+DD++A VME  E  I+E LG  +PY  
Sbjct: 87  ERQAAEQQKPLRDHLAHLLIHGVLHAQGYDHLDDEEAEVMEARETEIMESLGFPNPYSD 145


>gi|226939223|ref|YP_002794294.1| metal-dependent hydrolase [Laribacter hongkongensis HLHK9]
 gi|254801582|sp|C1DAV4|RRMF_LARHH RecName: Full=Probable rRNA maturation factor
 gi|226714147|gb|ACO73285.1| Predicted metal-dependent hydrolase [Laribacter hongkongensis
           HLHK9]
          Length = 166

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/132 (38%), Positives = 67/132 (50%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
            +  +      +    ++ L   D+   + LN EYRG D  TNVLSF             
Sbjct: 34  FARWVGAALQGRSRPAQIGLHVVDNAEGQRLNAEYRGKDSATNVLSFALNEGEEAVAGLP 93

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           ++GDIVLA E++  EA   GK+   H  HL +HG LHL G+DH  D +A  ME LE  IL
Sbjct: 94  LMGDIVLAAEVVAREAAEQGKDLHAHYAHLTVHGMLHLQGHDHETDTEAEAMEALETVIL 153

Query: 160 EDLGINDPYEVD 171
             LG  DPY V+
Sbjct: 154 ARLGYTDPYAVE 165


>gi|145223294|ref|YP_001133972.1| putative metalloprotease [Mycobacterium gilvum PYR-GCK]
 gi|315443754|ref|YP_004076633.1| hypothetical protein Mspyr1_21440 [Mycobacterium sp. Spyr1]
 gi|189039754|sp|A4T2C0|RRMF_MYCGI RecName: Full=Probable rRNA maturation factor
 gi|145215780|gb|ABP45184.1| protein of unknown function UPF0054 [Mycobacterium gilvum PYR-GCK]
 gi|315262057|gb|ADT98798.1| conserved hypothetical protein TIGR00043 [Mycobacterium sp. Spyr1]
          Length = 178

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V  K   N             ELS+V  D+  +  L
Sbjct: 1   MSIEVSNESGIDVSESELVSVARFVIRKMDVN----------PAAELSMVLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G     
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDTPEPGPSMLGDIVLCPEFAAKQAADAGHTLGQ 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M  L+R +LE+ 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPDEEKEMFALQRELLEEW 148


>gi|73662495|ref|YP_301276.1| hypothetical protein SSP1186 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123642702|sp|Q49Y13|RRMF_STAS1 RecName: Full=Probable rRNA maturation factor
 gi|72495010|dbj|BAE18331.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 153

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 3/112 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEI 113
           LS+ F D   I+ +N  YR  DK T+V+SF       +        +LGDI++  ++ + 
Sbjct: 40  LSVTFVDKDEIQEINKMYRDKDKVTDVISFALEEDEPEITGIEMPRVLGDIIICTDVAQE 99

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A+  G  FE  L  L +HGFLHLLGYDH++++D   M G +  IL   G+ 
Sbjct: 100 QADSYGHSFERELGFLALHGFLHLLGYDHMNEQDEKQMFGRQDQILNAYGLT 151


>gi|328957478|ref|YP_004374864.1| putative metalloprotease [Carnobacterium sp. 17-4]
 gi|328673802|gb|AEB29848.1| putative metalloprotease [Carnobacterium sp. 17-4]
          Length = 158

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 11/152 (7%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE +     +    +++    +  +       E+S+ F D+  I+ +N  YRG D+PT+V
Sbjct: 7   DETNKIATEQKELIQSLLEF-AGNHLELPKDTEMSVTFVDNENIQKINKTYRGKDQPTDV 65

Query: 84  LSFPTAFASSDG----------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           +SF     + D                +GDI+++ +    +A+  G  F+  L  L +HG
Sbjct: 66  ISFAIEDEAEDELMINFDTLEEPMPRNIGDIIISVDKTASQADEYGHSFDRELGFLALHG 125

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           FLHL GYDH+  +D   M GL++ ILE  G+ 
Sbjct: 126 FLHLNGYDHMTPEDEKEMFGLQKEILEAYGLK 157


>gi|307266422|ref|ZP_07547958.1| protein of unknown function UPF0054 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918530|gb|EFN48768.1| protein of unknown function UPF0054 [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 159

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D I+L  L E V    +            + VE+S+ F D+  I  LN  YRGIDKPT+V
Sbjct: 13  DAINLEELVEKVIKTVLE------VEEVIDNVEVSVSFVDNEEIRKLNKYYRGIDKPTDV 66

Query: 84  LSFPTAFASS----------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           LSFP A              D      +GDIV++ E    ++   G  FE  + +L  H 
Sbjct: 67  LSFPLAEFEDTYAEVEEIEEDSEEVQPIGDIVISLEKALEQSMEYGHSFEREVAYLTAHS 126

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHLLGYDH  +++  +M   E  ++  L I
Sbjct: 127 MLHLLGYDHETEEERKIMREKEEEVMARLNI 157


>gi|291533049|emb|CBL06162.1| conserved hypothetical protein TIGR00043 [Megamonas hypermegale
           ART12/1]
          Length = 159

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E +       +   G     +  E+S+ FTD+  I  +N EYR +D+PT+V+SF     
Sbjct: 20  DEKLSDTVKEAVEKVGQLYALDNAEVSITFTDNEHIHEINREYRKVDRPTDVISFALNEG 79

Query: 92  SSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                       MLGDI+++ E    +A   G      +  L +HG LHLLGYDH+++ D
Sbjct: 80  DEPNIEGEIPVNMLGDIIISVEKAIEQAGDYGHSIRREIAFLTVHGMLHLLGYDHIEEAD 139

Query: 148 ACVMEGLERSILEDLGIN 165
              M   E  ++E LGI+
Sbjct: 140 RVEMRKEEDFVMEQLGIS 157


>gi|254470656|ref|ZP_05084059.1| diacyglycerol kinase [Pseudovibrio sp. JE062]
 gi|211959798|gb|EEA94995.1| diacyglycerol kinase [Pseudovibrio sp. JE062]
          Length = 168

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 69/158 (43%), Positives = 90/158 (56%), Gaps = 5/158 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + + +E   W  E    TL  +      +   +    V EN  E+SLVFTD   I+ LN 
Sbjct: 9   IDLLIEAGDWESE---ETLEAIAEKAIAAAFATSDLSVIEN-TEVSLVFTDDAHIQELNK 64

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            +R  DKPTNVLSFP    S +     +LGDI++A E ++ EA  LG  FE+HL+HLI+H
Sbjct: 65  MWRQKDKPTNVLSFP-GDDSEEPPFGPLLGDIIIANETVKREAVELGIPFEHHLIHLIVH 123

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           G LHL GYDH  D++A  ME  ER IL  L I DPY+ 
Sbjct: 124 GTLHLFGYDHQIDEEAEEMEAEERLILASLQIPDPYKD 161


>gi|311069133|ref|YP_003974056.1| putative metalloprotease [Bacillus atrophaeus 1942]
 gi|310869650|gb|ADP33125.1| putative metalloprotease [Bacillus atrophaeus 1942]
          Length = 157

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 14/159 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I  E     +E+       + FA     +        ++  E+S+    +  I+ +N 
Sbjct: 5   IDIIDETESVAEEMLKEVEKLLQFAAEREGV--------QDQAEVSVTIVTNDEIQQINK 56

Query: 73  EYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           EYRG D PT+V+SF                   +LGDI+++ +    +A   G  F   L
Sbjct: 57  EYRGKDTPTDVISFALEEEGEDEVEIVGAEMPPVLGDIIISADRTREQAEEYGHSFLREL 116

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L +HGFLHLLGYDH+  +    M   ++ +L++ G+ 
Sbjct: 117 GFLAVHGFLHLLGYDHMTKEQEEEMFTKQKDLLDNYGLT 155


>gi|312875653|ref|ZP_07735654.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2053A-b]
 gi|311088907|gb|EFQ47350.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 2053A-b]
          Length = 175

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   +     +   +  LI  +K    K N  E+S+ F + ++I  +N  YRG
Sbjct: 5   DISFNDEVDFFSDTRKNWKTWIEELILSAKKNIKKTNRQEMSINFVNINKIHEINKNYRG 64

Query: 77  IDKPTNVLSFPTAFASSDGCSSLML---------GDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF     + +   +  +         GD+ +  E++E  A      F     
Sbjct: 65  KDRPTDVISFAIEDGTDNDLFAQFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH+ D +A VM G++  +LE+ G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIKDDEAEVMFGIQSKVLEEYGLP 162


>gi|42519247|ref|NP_965177.1| hypothetical protein LJ1323 [Lactobacillus johnsonii NCC 533]
 gi|62901443|sp|Q74IY8|RRMF_LACJO RecName: Full=Probable rRNA maturation factor
 gi|41583535|gb|AAS09143.1| hypothetical protein LJ_1323 [Lactobacillus johnsonii NCC 533]
          Length = 175

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE++     +  +   +SNL+  +K    KEN  E+S+ F  S +I  +N +YRG
Sbjct: 5   DISFNDEVNFLKDSDKDWITWISNLLLSAKKEIHKENTQEMSINFVSSKKIHEINKKYRG 64

Query: 77  IDKPTNVLSFPTAFA---------SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF              S D      +GD+ L  E+I+  +      F     
Sbjct: 65  KDRPTDVISFAIEDGLDEDFISAFSDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH++D +A VM G++  +L + G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIEDDEAKVMFGIQGKVLREYGLP 162


>gi|6523485|emb|CAB62265.1| YbeY protein [Salmonella typhimurium]
          Length = 123

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 15/137 (10%)

Query: 6   VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           ++   LDLQ+A EN A   DE   +   + V  +             +   E+++   D 
Sbjct: 1   MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDE 48

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG DKPTNVLSFP  F +  G    +LGD+++  +++E EA    K  E 
Sbjct: 49  AESHDLNLTYRGKDKPTNVLSFP--FEAPAGIEMPLLGDLIICRQVVEQEAQEQSKPLEA 106

Query: 125 HLVHLIIHGFLHLLGYD 141
           H  H+++HG LHLLGYD
Sbjct: 107 HWAHMVVHGSLHLLGYD 123


>gi|312135090|ref|YP_004002428.1| hypothetical protein Calow_1065 [Caldicellulosiruptor owensensis
           OL]
 gi|311775141|gb|ADQ04628.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           owensensis OL]
          Length = 158

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 12/161 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +   +V+N I    F++E   E+S++  D++ I+ LN 
Sbjct: 1   MKIFIQNQQ--DKVDVAEHISKIIEASVANTI--KIFLQEENFEVSVLIVDNNLIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC--------SSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +YR I+K T+VLSFP     +             + LGDIV++ E    +A   G   E 
Sbjct: 57  KYRNINKETDVLSFPIFEFKNGQLQEDIVIVEDEIPLGDIVISIEKALQQAEEFGHSLER 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+ 
Sbjct: 117 EVAYLTVHSVLHLLGFDHIEEDDRKVMRKYEEQILDSMGLT 157


>gi|289434747|ref|YP_003464619.1| hypothetical protein lse_1382 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170991|emb|CBH27533.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|313633222|gb|EFS00094.1| putative metalloprotease [Listeria seeligeri FSL N1-067]
 gi|313637811|gb|EFS03155.1| putative metalloprotease [Listeria seeligeri FSL S4-171]
          Length = 161

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E      E   + L E +         +  Y   +   ELSL FT +  I  +
Sbjct: 4   LEIDLIDETKQIPTED--KQLVENILQ------FAADYLKIDAGTELSLTFTTNEGIREI 55

Query: 71  NFEYRGIDKPTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF             +   D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRNKDQATDVISFALEELGEGETEIDWGEFDLETPKMLGDIIISTEKAEEQAKDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                L  L +HG LHLLGYDH++  +  +M GL++ +L+  G+ 
Sbjct: 116 SKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKEVLDAYGLE 160


>gi|325129682|gb|EGC52496.1| hypothetical protein TIGR00043 [Neisseria meningitidis OX99.30304]
          Length = 171

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +  GY       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKSGY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMRAAGFPNPYQED 169


>gi|59800603|ref|YP_207315.1| hypothetical protein NGO0145 [Neisseria gonorrhoeae FA 1090]
 gi|268596185|ref|ZP_06130352.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|291044524|ref|ZP_06570233.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293397660|ref|ZP_06641866.1| hypothetical protein NGNG_00646 [Neisseria gonorrhoeae F62]
 gi|59717498|gb|AAW88903.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|268549973|gb|EEZ44992.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|291011418|gb|EFE03414.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611606|gb|EFF40675.1| hypothetical protein NGNG_00646 [Neisseria gonorrhoeae F62]
          Length = 211

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 55/175 (31%), Positives = 78/175 (44%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA     I      E  F +   + +   Y       ++ 
Sbjct: 43  RAKKYPFLTLQRQRFHLNFENASSAAGIP----AERDFYRWAWSALKNEYLR----ADIG 94

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++  EA 
Sbjct: 95  LILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDLIICPQVVLKEAA 154

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH+ D +A +ME  E  ++   G  +PY  D
Sbjct: 155 EQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAAGYPNPYRED 209


>gi|316985396|gb|EFV64344.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 209

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 72  AERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 127

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 128 EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 187

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 188 IMEAEEIRLMRAAGFPNPYQED 209


>gi|239817628|ref|YP_002946538.1| hypothetical protein Vapar_4667 [Variovorax paradoxus S110]
 gi|239804205|gb|ACS21272.1| protein of unknown function UPF0054 [Variovorax paradoxus S110]
          Length = 152

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 20/169 (11%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M++  ++   L LQ A      G E H   L      + + + +       E   E+++ 
Sbjct: 1   MALPALS---LSLQFA---RFKGVERHRAALPRHSVTRWIRHAL-------EIDAEITVR 47

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D+   + LN E+RG D  TNVL+F          S +++ D+VL   ++  EA    K
Sbjct: 48  IVDAEEGQRLNREFRGKDYATNVLTFDYT------QSPMVMADLVLCAPVVASEAKEQRK 101

Query: 121 EFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
               H  HL++HG LH  G+DH   + DA  ME  E  IL  LGI +PY
Sbjct: 102 TLAAHYAHLLVHGTLHAQGWDHETGEADAEAMEAREIEILAGLGIRNPY 150


>gi|297584645|ref|YP_003700425.1| hypothetical protein Bsel_2356 [Bacillus selenitireducens MLS10]
 gi|297143102|gb|ADH99859.1| protein of unknown function UPF0054 [Bacillus selenitireducens
           MLS10]
          Length = 156

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 11/156 (7%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           ++ I  E     D+  L+ + +V+F+   +  I  G        E+S+      RI+ LN
Sbjct: 7   EIDILDETEKLHDDA-LQLIRDVLFSAMKAEDIPMG-------TEVSVSIVTDGRIQELN 58

Query: 72  FEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +YR  D+PT+VLSF                MLGDI+++   +  +++  G  FE  L  
Sbjct: 59  RDYREKDRPTDVLSFALHDGEEQIIAPTIPDMLGDIIISLPAVYRQSDEYGHSFERELAF 118

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           L +HGFLHL GYDH ++ D   M   +  +L   GI
Sbjct: 119 LTVHGFLHLCGYDHENEADEQKMFARQEELLTAYGI 154


>gi|327440938|dbj|BAK17303.1| predicted metal-dependent hydrolase [Solibacillus silvestris
           StLB046]
          Length = 161

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 6/126 (4%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------S 98
           +      E+  E+S+ F  +  I  +N EYR  D+PT+V+SF                  
Sbjct: 28  AAEQEGIEDGSEVSVTFVTNEAIHEINREYRDKDQPTDVISFALEEMGEGELQIIGEGIP 87

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
            +LGDI+++ +    +A   G  FE  L  L +HGFLHLLGYDH+  +D  VM G + +I
Sbjct: 88  RILGDIIISTDRTREQAAEYGHTFERELGFLAVHGFLHLLGYDHMTREDEKVMFGKQDTI 147

Query: 159 LEDLGI 164
           L+  G+
Sbjct: 148 LQSYGL 153


>gi|309810260|ref|ZP_07704105.1| translation metalloprotein YbeY [Lactobacillus iners SPIN
           2503V10-D]
 gi|312871748|ref|ZP_07731836.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 3008A-a]
 gi|325912641|ref|ZP_08175024.1| translation metalloprotein YbeY [Lactobacillus iners UPII 60-B]
 gi|308169532|gb|EFO71580.1| translation metalloprotein YbeY [Lactobacillus iners SPIN
           2503V10-D]
 gi|311092690|gb|EFQ51046.1| translation metalloprotein YbeY [Lactobacillus iners LEAF 3008A-a]
 gi|325478062|gb|EGC81191.1| translation metalloprotein YbeY [Lactobacillus iners UPII 60-B]
          Length = 175

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   +     +   +  LI  +K    K N  E+S+ F D +++  +N  YRG
Sbjct: 5   DISFNDEVDFFSDTRKNWKTWIEELILSAKKNIKKTNRQEMSINFVDINKMHEINKNYRG 64

Query: 77  IDKPTNVLSFPTAFASSDGCSSLML---------GDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF       +   +  +         GD+ +  E++E  A      F     
Sbjct: 65  KDRPTDVISFAIEDGIDNDLFAQFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH+ D +A VM G++  +LE+ G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIKDDEAEVMFGIQSKVLEEYGLP 162


>gi|227485439|ref|ZP_03915755.1| metal-dependent hydrolase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236569|gb|EEI86584.1| metal-dependent hydrolase [Anaerococcus lactolyticus ATCC 51172]
          Length = 152

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 8/156 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L +A +     D   +R   E    K +  ++    F +    E+SL   D   I  L
Sbjct: 1   MNLLLANDTKNDLDLDLIRERAE----KTIEEVLRVENFTEN--AEVSLSIVDMETIHRL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFA--SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N EYR +D+PT+VLSFP       ++G S  +LGDIV+  ++ E +A   G   E  +++
Sbjct: 55  NKEYREVDRPTDVLSFPMDEEGYDNEGNSIFLLGDIVICLDVAENQAKDFGHSLEREMMY 114

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           LI H  LHLLGYDH+++ D   M   E+ ++++LG+
Sbjct: 115 LICHSTLHLLGYDHIEEDDKLEMRSREKEVMKNLGV 150


>gi|194097776|ref|YP_002000817.1| Putative metalloprotease NGO0145 [Neisseria gonorrhoeae NCCP11945]
 gi|268594133|ref|ZP_06128300.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|193933066|gb|ACF28890.1| Putative metalloprotease NGO0145 [Neisseria gonorrhoeae NCCP11945]
 gi|268547522|gb|EEZ42940.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|317163557|gb|ADV07098.1| Putative metalloprotease [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 211

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++ L+  D       N +YRG D  TNVLSF     
Sbjct: 72  AERDFYRWAWSALKNEYLR----ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 127

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH+ D +A 
Sbjct: 128 EILPCQVSERLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAE 187

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY  D
Sbjct: 188 IMEAEEIRLMRAAGYPNPYRED 209


>gi|34499607|ref|NP_903822.1| hypothetical protein CV_4152 [Chromobacterium violaceum ATCC 12472]
 gi|46577368|sp|Q7NQI5|RRMF_CHRVO RecName: Full=Probable rRNA maturation factor
 gi|34105458|gb|AAQ61813.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 168

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 13/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L L +  + A       +R  C+    + V               ++S+V  D+     
Sbjct: 18  ELTLDVRSDAAALPPPALIRRACQAALRRDV------------KQAQISIVIVDAAEGRQ 65

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG D  TNVLSF            L  GD+VL   ++E EA    K    H  HL
Sbjct: 66  LNNDYRGKDYATNVLSFALNEGEPVEGLPLF-GDLVLCAPVVEQEAAEQNKALMAHYAHL 124

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHL G+DH +D +A  ME LE  I++ LG  DPY  +
Sbjct: 125 LVHGMLHLQGFDHEEDAEAEAMEVLETVIVKQLGYPDPYHEE 166


>gi|310643041|ref|YP_003947799.1| metalloprotease [Paenibacillus polymyxa SC2]
 gi|309247991|gb|ADO57558.1| Putative metalloprotease [Paenibacillus polymyxa SC2]
          Length = 165

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 19/169 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + LQ+A     W +E +   + E +     + L   G        E++L F +  +I  L
Sbjct: 1   MGLQLA-----WNNEQNDMVINESLITLLNTLLEQAGKAEGVTDGEVALTFVNDDQIHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLMLGDIVLAYEIIEIEAN 116
           N +YRGID+PT+VLSF       +                   +LGDI+++ +  + ++ 
Sbjct: 56  NRDYRGIDRPTDVLSFAMKETLDEELEIIYEPTEDNPLNDVPDVLGDIIISVQTAQAQSE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E  +  L +HGFLHLLGYDH DD     M G + ++L  +G+ 
Sbjct: 116 EYGHSIEREIGFLFVHGFLHLLGYDHQDDASEAEMMGKQEAVLAQVGLT 164


>gi|257882778|ref|ZP_05662431.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257886864|ref|ZP_05666517.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257898044|ref|ZP_05677697.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|293571620|ref|ZP_06682641.1| conserved hypothetical protein [Enterococcus faecium E980]
 gi|294622996|ref|ZP_06701885.1| conserved hypothetical protein [Enterococcus faecium U0317]
 gi|257818436|gb|EEV45764.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257822918|gb|EEV49850.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257835956|gb|EEV61030.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|291597552|gb|EFF28714.1| conserved hypothetical protein [Enterococcus faecium U0317]
 gi|291608290|gb|EFF37591.1| conserved hypothetical protein [Enterococcus faecium E980]
          Length = 158

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+    E     +E        + FA          Y       E+S+ F D+  I+ +
Sbjct: 1   MDITFMDETNQVSEEKMKEIDDLLQFAA--------SYLELPEETEMSVTFMDNAAIQVI 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS----------SLMLGDIVLAYEIIEIEANVLGK 120
           N +YRG D PT+V+SF       D               +LGDI+++ E    +A   G 
Sbjct: 53  NRDYRGKDAPTDVISFALEEEGEDEIPVIFEDGENPLPRVLGDIMISTERAAEQAEAYGH 112

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            ++  L  L +HGFLH+ GYDH+  +D   M GL++ IL+  G+ 
Sbjct: 113 SYDRELGFLAVHGFLHINGYDHMTPEDEKEMFGLQKEILDAYGLK 157


>gi|309805177|ref|ZP_07699229.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           09V1-c]
 gi|329920078|ref|ZP_08276909.1| translation metalloprotein YbeY [Lactobacillus iners SPIN 1401G]
 gi|308165411|gb|EFO67642.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           09V1-c]
 gi|328936532|gb|EGG32976.1| translation metalloprotein YbeY [Lactobacillus iners SPIN 1401G]
          Length = 175

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   +     +   +  LI  +K    K N  E+S+ F + ++I  +N  YRG
Sbjct: 5   DISFNDEVDFFSDTRKNWKTWIEELILSAKKNIKKTNRQEMSINFVNINKIHEINKNYRG 64

Query: 77  IDKPTNVLSFPTAFASSDGCSSLML---------GDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF     + +   +  +         GD+ +  E++E  A      F     
Sbjct: 65  KDRPTDVISFAIEDGTDNDLFAQFIETPDFVEDIGDLFICPEVVEKHATEYETGFYREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH+ D +A VM G++  +LE+ G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIQDDEAEVMFGIQSKVLEEYGLP 162


>gi|300812188|ref|ZP_07092630.1| translation metalloprotein YbeY [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496824|gb|EFK31904.1| translation metalloprotein YbeY [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 174

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   T  +  +   +  L+  +K    K+N  E+S+ F D  R + +N +YR 
Sbjct: 5   DVSYSDEVGFLTKGDRDWEDWIMQLLLMAKKEIGKDNAQEMSINFVDEDRSQAINRDYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D   +  +GD+ +   +IE  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGDDGLDLAMFTQDPDFTEDIGDLFMCPSVIERHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + I+HG+LHL GYDH++  +A  M G++  ILE+ G+ 
Sbjct: 125 YTIVHGYLHLNGYDHIEPDEAKEMFGIQGKILEEYGLP 162


>gi|302869293|ref|YP_003837930.1| hypothetical protein Micau_4845 [Micromonospora aurantiaca ATCC
           27029]
 gi|315504232|ref|YP_004083119.1| hypothetical protein ML5_3454 [Micromonospora sp. L5]
 gi|302572152|gb|ADL48354.1| protein of unknown function UPF0054 [Micromonospora aurantiaca ATCC
           27029]
 gi|315410851|gb|ADU08968.1| protein of unknown function UPF0054 [Micromonospora sp. L5]
          Length = 157

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +  D        + V A A   L   G      + ELS++  D   +  L
Sbjct: 1   MSIEIANESGVDVD-------TDAVLAVARHALDEMGV---NPLAELSVLLVDIEYMSEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDIVLAYEIIEIEANVLGKE 121
           N  + G D PT+VL+FP    S D         G    +LGDIVL  E+   +A V G  
Sbjct: 51  NHRWMGGDGPTDVLAFPMDEGSVDHGPGESNPAGGEPALLGDIVLCPEVAAKQAAVAGHS 110

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             + L  L +HG LHLLGYDH + ++   M GL+  +L   
Sbjct: 111 AADELHLLTVHGVLHLLGYDHAEPEEEREMFGLQARLLASW 151


>gi|326389851|ref|ZP_08211415.1| protein of unknown function UPF0054 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|325994119|gb|EGD52547.1| protein of unknown function UPF0054 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 159

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D I+L  L E V    +            + VE+S+ F D+  I  LN  YRGIDKPT+V
Sbjct: 13  DAINLEELVEKVIKTVLE------VEEVIDNVEVSVSFVDNEEIRKLNKYYRGIDKPTDV 66

Query: 84  LSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           LSFP A              D      +GDIV++ E    ++   G  FE  + +L  H 
Sbjct: 67  LSFPLAEFEETYGEVEKIEEDSEEVQPIGDIVISLEKALEQSIEYGHSFEREVAYLTAHS 126

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHLLGYDH  +++  +M   E  ++  L I
Sbjct: 127 MLHLLGYDHETEEERKIMREKEEEVMARLNI 157


>gi|330686100|gb|EGG97721.1| translation metalloprotein YbeY [Staphylococcus epidermidis VCU121]
          Length = 155

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 10/150 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKP 80
           I      E+V  +    +     F K+        ELS+ F D   I+ +N  YR  DK 
Sbjct: 4   IDFSDHTELVKDEWYEQIEKLLNFAKQEEQINEDAELSITFVDKSEIQEINKMYRDKDKV 63

Query: 81  TNVLSFPTAFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           T+V+SF       D          +LGDI++  ++ + ++   G  FE  L  L +HGFL
Sbjct: 64  TDVISFALEEDEPDIDMSEFNIPRVLGDIIICTDVAQEQSESYGHSFERELGFLALHGFL 123

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HLLGYDH++++D   M G + +IL   G+ 
Sbjct: 124 HLLGYDHMNEEDEKEMFGRQDAILNAYGLT 153


>gi|268319371|ref|YP_003293027.1| hypothetical protein FI9785_888 [Lactobacillus johnsonii FI9785]
 gi|262397746|emb|CAX66760.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 175

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+      +  +   +SNL+  +K    KEN  E+S+ F  S +I  +N +YRG
Sbjct: 5   DISFNDEVTFLKDSDKDWISWISNLLLSAKKEIHKENAQEMSINFVSSEKIHEINKKYRG 64

Query: 77  IDKPTNVLSFPTAFA---------SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF              S D      +GD+ L  E+I+  +      F     
Sbjct: 65  KDRPTDVISFAIEDGLDEDFMSAFSDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH++D +A +M G++  +L + G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIEDDEAKIMFGIQGKVLREYGLP 162


>gi|296282477|ref|ZP_06860475.1| metal-dependent hydrolase [Citromicrobium bathyomarinum JL354]
          Length = 160

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/164 (35%), Positives = 81/164 (49%), Gaps = 13/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L+I VE+  W D        + + +++          +    +E S++FT   ++  L
Sbjct: 1   MELEIDVEH--WPDGE-----WDALASRSADAAAQVEPALANARLEASILFTSDAQVHEL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASS-----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           N ++R  DKPTNVLSFP            G    +LGDI LAYE    EA   G   E H
Sbjct: 54  NRDWREKDKPTNVLSFPMLERDELIDLAPGGPPALLGDIALAYETCAREAAEKGIPLEAH 113

Query: 126 LVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
             HL++HG LHL G DH +   DA  ME LE   L  LG+ DPY
Sbjct: 114 ASHLVVHGLLHLAGLDHEISPADAQEMEALEVKALALLGLPDPY 157


>gi|78043035|ref|YP_359288.1| hypothetical protein CHY_0427 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123576940|sp|Q3AEZ6|RRMF_CARHZ RecName: Full=Probable rRNA maturation factor
 gi|77995150|gb|ABB14049.1| conserved hypothetical protein TIGR00043 [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 143

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 4/109 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+   D++ I++LN EYR  D PT+VLSFP A    D     +LGD+V++ E    +A 
Sbjct: 38  VSIALVDNNYIQSLNREYRQKDVPTDVLSFPLADDKDDE----VLGDVVISLEKAAEQAK 93

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G  F   +  L +HG LHLLG+DH ++++  +M   E  IL  LG+ 
Sbjct: 94  EYGHSFFREVAFLTVHGVLHLLGHDHYEEEETRIMREKEEKILSALGLE 142


>gi|313608753|gb|EFR84572.1| putative metalloprotease [Listeria monocytogenes FSL F2-208]
          Length = 161

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E      E   + L E +         +  Y   E   ELSL FT +  I  +
Sbjct: 4   LEIDLLDETKKLPAED--KQLVENILQ------FAAEYLKIEQGTELSLTFTTNEGIREI 55

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF                 D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                L  L +HG LHLLGYDH++  +  VM GL++ +L+  G+ 
Sbjct: 116 TKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLE 160


>gi|218767660|ref|YP_002342172.1| hypothetical protein NMA0717 [Neisseria meningitidis Z2491]
 gi|26006911|sp|Q9JVS5|RRMF_NEIMA RecName: Full=Probable rRNA maturation factor
 gi|121051668|emb|CAM07971.1| hypothetical protein NMA0717 [Neisseria meningitidis Z2491]
          Length = 171

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +  GY       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKSGY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMLAAGFPNPYQED 169


>gi|256545613|ref|ZP_05472971.1| metalloprotease [Anaerococcus vaginalis ATCC 51170]
 gi|256398690|gb|EEU12309.1| metalloprotease [Anaerococcus vaginalis ATCC 51170]
          Length = 164

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 14/170 (8%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M  +     +++L I  E     +E+++    E V  + +     K   + E   E+SL 
Sbjct: 1   MIRQIRKKKKMNLIINNETK---EEVNIENYLEKVIREVL-----KLEDIDEKKCEISLS 52

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS------LMLGDIVLAYEIIEIE 114
           F D  +I  LN ++R ID+ T+VLSFP     ++   +      LMLGD+V+  ++   +
Sbjct: 53  FVDEEKIRQLNKDFRSIDRVTDVLSFPIEDFFNEDRENILEKPYLMLGDVVICLDVARKQ 112

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           A+ LG  FE  +++L  H  LHLLGYDH++D D  +M   E+ ++++LG+
Sbjct: 113 ADDLGHSFEREVMYLTCHSILHLLGYDHIEDDDKKIMRKREKEVMKNLGV 162


>gi|163747523|ref|ZP_02154873.1| hypothetical protein OIHEL45_01040 [Oceanibulbus indolifex HEL-45]
 gi|161379201|gb|EDQ03620.1| hypothetical protein OIHEL45_01040 [Oceanibulbus indolifex HEL-45]
          Length = 181

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/172 (37%), Positives = 90/172 (52%), Gaps = 18/172 (10%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           D  I +E+  W + + L  L        + +L      +     E++L+  D  RI  LN
Sbjct: 14  DFDIVIEDDRW-EAVDLERLAHAAAQATLGHL-----GLDAETAEMTLLACDDARIAVLN 67

Query: 72  FEYRGIDKPTNVLSFPTAF--ASSDGCSSLM----------LGDIVLAYEIIEIEANVLG 119
            ++RG  + TNVLS+P     A++ G   L           LGDI +AYE    EA+   
Sbjct: 68  EDFRGKARATNVLSWPAEERGAAAPGGDPLPVAPGIDGMLELGDIAMAYETCAAEASAAA 127

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           K    H+ HLI+HG LHLLGYDH +D DA +MEGLER IL  +G +DPY+ +
Sbjct: 128 KPLNAHVTHLIVHGLLHLLGYDHENDPDAMLMEGLEREILGKMGYDDPYKEN 179


>gi|307243719|ref|ZP_07525859.1| translation metalloprotein YbeY [Peptostreptococcus stomatis DSM
           17678]
 gi|306492928|gb|EFM64941.1| translation metalloprotein YbeY [Peptostreptococcus stomatis DSM
           17678]
          Length = 153

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 3/148 (2%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           ++ D      L + +  K  + ++    Y   ++  E+SL F  +  I  +N +YR IDK
Sbjct: 4   IFEDRQDFVKLDQDIMDKIEAVILEVLAYEGYDDDYEVSLSFVSNDEIREINRDYRNIDK 63

Query: 80  PTNVLSFPTAFASSDGCS--SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
            T+VLSFP            ++ LGDIV++ E    +A   G   E  +  L+ H   HL
Sbjct: 64  VTDVLSFPMYDGEEVDVDFGAISLGDIVISIERAADQAKDFGHSLEREVCFLVCHSMFHL 123

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH+++++A  M   E  +L  LGI 
Sbjct: 124 LGYDHMEEEEAKEMHAKEEDVLSQLGIT 151


>gi|227890110|ref|ZP_04007915.1| metal-dependent hydrolase [Lactobacillus johnsonii ATCC 33200]
 gi|227849554|gb|EEJ59640.1| metal-dependent hydrolase [Lactobacillus johnsonii ATCC 33200]
          Length = 175

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+      +  +   +SNL+  +K    KEN  E+S+ F  S +I  +N +YRG
Sbjct: 5   DISFNDEVTFLKDSDKDWISWISNLLLSAKKEIHKENSQEMSINFVSSKKIHEINKKYRG 64

Query: 77  IDKPTNVLSFPTAFA---------SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF              S D      +GD+ L  E+I+  +      F     
Sbjct: 65  KDRPTDVISFAIEDGLDEDFMSAFSDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH++D +A +M G++  +L + G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIEDDEAKIMFGIQGKVLREYGLP 162


>gi|1303823|dbj|BAA12479.1| YqfG [Bacillus subtilis]
          Length = 157

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETL 70
           + I  E     +E+           K V NL+  +      ++  E+S+    +  I  +
Sbjct: 5   IDIVDETGSVSEEM----------LKEVENLLQFAAEREGVQDQAEVSVTIVSNDDIHQI 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           N EYRG D PT+V+SF                   +LG+I+++ +    +A      F+ 
Sbjct: 55  NKEYRGKDAPTDVISFALEEEGEGEIEIVGAEMPPVLGNIIISADRTREQAEEYNHSFKR 114

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            L  L +HGFLHLLGYDH+  ++   M   ++ +L+  G+ 
Sbjct: 115 ELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLK 155


>gi|239637618|ref|ZP_04678590.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239596836|gb|EEQ79361.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 155

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 10/150 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENI-----VELSLVFTDSHRIETLNFEYRGIDKP 80
           I      E+V  +    +     F K+        ELS+ F D   I+ +N  YR  DK 
Sbjct: 4   IDFSDHTELVKDEWYEQIEKLLNFAKQQEEISEDAELSITFVDKSEIQEINKMYRDKDKV 63

Query: 81  TNVLSFPTAFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           T+V+SF       D          +LGDI++  ++ + ++   G  FE  L  L +HGFL
Sbjct: 64  TDVISFALEEDEPDIDMSEFDIPRVLGDIIICTDVAQEQSESYGHSFERELGFLALHGFL 123

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HLLGYDH++++D   M G + +IL   G+ 
Sbjct: 124 HLLGYDHMNEEDEKEMFGRQDAILNAYGLT 153


>gi|317132157|ref|YP_004091471.1| protein of unknown function UPF0054 [Ethanoligenens harbinense
           YUAN-3]
 gi|315470136|gb|ADU26740.1| protein of unknown function UPF0054 [Ethanoligenens harbinense
           YUAN-3]
          Length = 164

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 8/150 (5%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + + +   ++  +  +  ++   F  E   E+++ F D  +I+ LN +YR  D  T+VLS
Sbjct: 15  VKIPSGLRLLVRRCCNATLANEGF--EGSAEVNVTFVDDAQIKELNAQYRHKDTATDVLS 72

Query: 86  FPTA----FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP      F  +    + +LGD+V++ E    +A   G   ++ +  L +H  LH+LGYD
Sbjct: 73  FPMGENGKFDLNPDTGAYVLGDVVISLETATAQAEKYGHSLQHEVAFLTVHSMLHILGYD 132

Query: 142 HVDDK-DACVMEGLERSILEDLGIN-DPYE 169
           H     +A  M   E  I+  LG   D YE
Sbjct: 133 HEQGGIEAVRMHEHEDVIMNALGFPRDVYE 162


>gi|189040309|sp|A8M0W3|RRMF_SALAI RecName: Full=Probable rRNA maturation factor
          Length = 157

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 19/161 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +  D        + V A A   L   G      + ELS++  D   +  L
Sbjct: 1   MSIEIANESGVDID-------TDAVLAVARHALDEMGV---NQLAELSVLLVDIDYMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDIVLAYEIIEIEANVLGKE 121
           N  + G D PT+VL+FP    S D         G    +LGDIVL  E+   +A   G  
Sbjct: 51  NHRWMGGDGPTDVLAFPMDEGSVDHGPGESAVAGTEPALLGDIVLCPEVAAKQAATAGHS 110

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             + L  L +HG LHLLGYDH +  +   M  L+  +L   
Sbjct: 111 AADELHLLTVHGVLHLLGYDHAEPDEEREMFALQARLLAGW 151


>gi|167972975|ref|ZP_02555252.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 5 str. ATCC 27817]
 gi|167973948|ref|ZP_02556225.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 11 str. ATCC 33695]
 gi|167975657|ref|ZP_02557934.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 12 str. ATCC 33696]
 gi|167988132|ref|ZP_02569803.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 7 str. ATCC 27819]
 gi|168362746|ref|ZP_02695920.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 13 str. ATCC 33698]
 gi|195867954|ref|ZP_03079951.1| putative metalloprotease [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273580|ref|ZP_03206116.1| putative metalloprotease [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554156|ref|YP_002284937.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 10 str. ATCC 33699]
 gi|225550362|ref|ZP_03771311.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 2 str. ATCC 27814]
 gi|225551596|ref|ZP_03772542.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 8 str. ATCC 27618]
 gi|226702100|sp|B5ZBZ7|RRMF_UREU1 RecName: Full=Probable rRNA maturation factor
 gi|171903176|gb|EDT49465.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 13 str. ATCC 33698]
 gi|184209105|gb|EDU06148.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 5 str. ATCC 27817]
 gi|188019077|gb|EDU57117.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 7 str. ATCC 27819]
 gi|188998095|gb|EDU67192.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 11 str. ATCC 33695]
 gi|195659878|gb|EDX53258.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 12 str. ATCC 33696]
 gi|195660350|gb|EDX53610.1| putative metalloprotease [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198250100|gb|EDY74880.1| putative metalloprotease [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541657|gb|ACI59886.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 10 str. ATCC 33699]
 gi|225379411|gb|EEH01776.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 8 str. ATCC 27618]
 gi|225379516|gb|EEH01878.1| conserved hypothetical protein TIGR00043 [Ureaplasma urealyticum
           serovar 2 str. ATCC 27814]
          Length = 155

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 10/146 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           +++ DEI+L+   ++    ++   I K  F + +       F D   I+ +N +YR  D 
Sbjct: 11  SVFNDEIYLQRFEQIANLISIKLNIDKERFFECH-------FVDEKTIQEINRDYRNKDY 63

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T+V+SF           + +LG++ + Y+ +  +A   G  FE  L  L  HG LHLLG
Sbjct: 64  ITDVISFAF---DDGEIITPLLGEMYICYQKVVNQAKEFGHSFERELCFLFTHGLLHLLG 120

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YDH++ ++  +M GL+  IL +L I 
Sbjct: 121 YDHIEVEEEKIMFGLQDEILNELNIT 146


>gi|227551970|ref|ZP_03982019.1| metal-dependent hydrolase [Enterococcus faecium TX1330]
 gi|257895438|ref|ZP_05675091.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|293378305|ref|ZP_06624474.1| metalloprotein, YbeY family [Enterococcus faecium PC4.1]
 gi|293568656|ref|ZP_06679971.1| conserved hypothetical protein [Enterococcus faecium E1071]
 gi|227178875|gb|EEI59847.1| metal-dependent hydrolase [Enterococcus faecium TX1330]
 gi|257832003|gb|EEV58424.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|291588616|gb|EFF20449.1| conserved hypothetical protein [Enterococcus faecium E1071]
 gi|292643169|gb|EFF61310.1| metalloprotein, YbeY family [Enterococcus faecium PC4.1]
          Length = 158

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------- 97
           +  Y       E+S+ F D+  I+ +N +YRG D PT+V+SF       D          
Sbjct: 27  AASYLELPEETEMSVTFMDNAAIQVINRDYRGKDAPTDVISFALEEEGEDEIPVIFEDGE 86

Query: 98  ---SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                +LGDI+++ E    +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL
Sbjct: 87  NPLPRVLGDIMISTERAAEQAEAYGHSYDRELGFLAVHGFLHINGYDHMTPEDEKEMFGL 146

Query: 155 ERSILEDLGIN 165
           ++ IL+  G+ 
Sbjct: 147 QKEILDAYGLK 157


>gi|315303203|ref|ZP_07873860.1| putative metalloprotease [Listeria ivanovii FSL F6-596]
 gi|313628430|gb|EFR96906.1| putative metalloprotease [Listeria ivanovii FSL F6-596]
          Length = 161

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 22/167 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS--KGYFVKENIVELSLVFTDSHRIE 68
           L++ +  E      E            K V N++     Y   +   ELSL FT +  I 
Sbjct: 4   LEIDLIDETKELPAED----------KKLVENILQFXXDYLKMDQGTELSLTFTTNEGIR 53

Query: 69  TLNFEYRGIDKPTNVLSFP----------TAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
            +N +YR  D+ T+V+SF             +A  D  +  MLGDI+++ E  E +A   
Sbjct: 54  EINRDYRNKDQATDVISFALEELGEGETEIDWADFDLETPKMLGDIIISTEKAEEQAKEY 113

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G      L  L +HG LHLLGYDH++  +  +M GL++ +L+  G+ 
Sbjct: 114 GHTKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKEVLDAYGLE 160


>gi|295424888|ref|ZP_06817603.1| metal-dependent hydrolase [Lactobacillus amylolyticus DSM 11664]
 gi|295065454|gb|EFG56347.1| metal-dependent hydrolase [Lactobacillus amylolyticus DSM 11664]
          Length = 185

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 17/177 (9%)

Query: 1   MSVKKVNLPRLD-LQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVEL 57
           ++ K+    ++D ++I      + DE+      +  +   +  L+  +K    K+N +E+
Sbjct: 2   LTKKRTQNAKMDPIEIT-----YNDEVGFLNDDKRCWKDWIEKLLLLTKTKIGKKNNLEM 56

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDIVLAY 108
           S+ F +  R   +N +YR  D+PT+V+SF       D               +GD+ +  
Sbjct: 57  SINFVNEDRSHEINLKYRDKDRPTDVISFAIEDGEDDLDMAAFADDPDFQEDIGDLFMCP 116

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            +I+  +   G  F+    + ++HGFLHL GYDH+  ++A  M G++  +LE+ G+ 
Sbjct: 117 SVIKRHSVEYGTGFDREFGYTVVHGFLHLNGYDHIKPEEAKEMFGIQGKVLEEYGLP 173


>gi|167035831|ref|YP_001671062.1| putative metalloprotease [Pseudomonas putida GB-1]
 gi|189040216|sp|B0KJW3|RRMF_PSEPG RecName: Full=Probable rRNA maturation factor
 gi|166862319|gb|ABZ00727.1| protein of unknown function UPF0054 [Pseudomonas putida GB-1]
          Length = 157

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LD+Q    +A   D+   R  CE+   +  ++             E+++   D      
Sbjct: 3   ELDIQ-RATDAAAPDDAAFRRWCELALRQRTAD------------SEMTIRLVDEAEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YR  D  TNVLSFP A    D     +LGD+V+   ++E EA   GK  E H  HL
Sbjct: 50  LNHTYRHKDYATNVLSFP-ADVPDDLLDIPLLGDLVICVAVVEREAAEQGKSLEAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           ++HG LHLLGYDH++D++A  MEGLER +L +LG  DPY  D
Sbjct: 109 VMHGCLHLLGYDHIEDEEAEEMEGLERELLAELGHPDPYADD 150


>gi|145595964|ref|YP_001160261.1| putative metalloprotease [Salinispora tropica CNB-440]
 gi|189040145|sp|A4XAD4|RRMF_SALTO RecName: Full=Probable rRNA maturation factor
 gi|145305301|gb|ABP55883.1| protein of unknown function UPF0054 [Salinispora tropica CNB-440]
          Length = 157

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 19/161 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+    D        + V A A   L   G      + ELS++  D   +  L
Sbjct: 1   MSIEIANESGADVD-------TDAVLAVARHALDEMGV---NQLAELSVLLVDIDYMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDIVLAYEIIEIEANVLGKE 121
           N  + G D PT+VL+FP    S D         G    +LGDIVL  E+   +A   G  
Sbjct: 51  NHRWMGGDGPTDVLAFPMDEGSVDHGPGENAAAGAEPALLGDIVLCPEVAAKQAVTAGHS 110

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             + L  L +HG LHLLGYDH + ++   M  L+  +L   
Sbjct: 111 TADELHLLTVHGVLHLLGYDHAEPEEEREMFALQARLLASW 151


>gi|167758251|ref|ZP_02430378.1| hypothetical protein CLOSCI_00589 [Clostridium scindens ATCC 35704]
 gi|167664148|gb|EDS08278.1| hypothetical protein CLOSCI_00589 [Clostridium scindens ATCC 35704]
          Length = 164

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 17/155 (10%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E  L   CE +  + +   +   Y       E+SL+ T +  I  +N ++RGID+PT+VL
Sbjct: 10  EARLPIECEKIARQVIETTLD--YAGCPYEWEVSLLLTQNEEIRKMNRDFRGIDRPTDVL 67

Query: 85  SFPTAFASSDG---------------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           SFP       G                  LMLGDIV++ E +  +A   G         L
Sbjct: 68  SFPMTDYPVPGQFGFLEESDDCFHPESGELMLGDIVISKEKVLSQAEEFGHSALREYAFL 127

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           I H  LHL+GYDH+ D++  +ME  ++ I+E L I
Sbjct: 128 IAHSVLHLIGYDHMQDEERQIMERKQKEIMERLNI 162


>gi|149202104|ref|ZP_01879077.1| hypothetical protein RTM1035_12293 [Roseovarius sp. TM1035]
 gi|149144202|gb|EDM32233.1| hypothetical protein RTM1035_12293 [Roseovarius sp. TM1035]
          Length = 162

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
            + +E+  W     L  L E      + +L      +     E+S++  D  RI  LN +
Sbjct: 4   DVVIEDDRW-QAAALEDLAERAARATLEHLA-----MDPEDWEISILACDDARIAVLNED 57

Query: 74  YRGIDKPTNVLSFPTAFASSD----------GCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +R   +PTNVLS+P+   +++                LGDI +A++    EA    K   
Sbjct: 58  FRDKPQPTNVLSWPSEERAAEVSGVRPAPPMPSPDPELGDIAIAWDTCVREAAEGEKPLA 117

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +H+ HLI+H  LHLLGYDHV D+DA +ME  E  IL  LG++DPY
Sbjct: 118 DHVTHLIVHAVLHLLGYDHVRDQDATLMETTEVEILGKLGVSDPY 162


>gi|284990192|ref|YP_003408746.1| hypothetical protein Gobs_1659 [Geodermatophilus obscurus DSM
           43160]
 gi|284063437|gb|ADB74375.1| protein of unknown function UPF0054 [Geodermatophilus obscurus DSM
           43160]
          Length = 167

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 15/157 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +  DE  L  +C  V A+   N           + ELS++  D+  + TL
Sbjct: 1   MPVEVANESEIAVDESSLAAICTYVLAEMGVN----------PMAELSVLCVDADYMSTL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           +  + G   PT+VL+FP                 +LGD+VL   +   +A   G   ++ 
Sbjct: 51  HERWMGEKGPTDVLAFPMDELDTGRPDEPDPGPALLGDVVLCPSVAIRQARAAGHTMDDE 110

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L+ L  HG LHLLGYDH++  +   M GL+  +L+  
Sbjct: 111 LILLATHGVLHLLGYDHMEPDEEKEMFGLQSKLLDGW 147


>gi|332530325|ref|ZP_08406271.1| putative metal-dependent hydrolase [Hylemonella gracilis ATCC
           19624]
 gi|332040311|gb|EGI76691.1| putative metal-dependent hydrolase [Hylemonella gracilis ATCC
           19624]
          Length = 169

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 16/165 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
             LP L L +   NA+   E H + L +    + +   + +         E+++    + 
Sbjct: 20  TELPDLTLDLQFGNAV--PEAHKKLLSKARVTRWMRMALLR-------DAEITVRVVGAA 70

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN +YR  D  TNVL+F            ++  D+VL   ++  EA    K  E H
Sbjct: 71  EGRALNRDYRNKDYATNVLTFDYT------KEPVVTADLVLCAPVVAKEAKEQNKSPEEH 124

Query: 126 LVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGINDPYE 169
             HL++HG LH  GYDH   + DA  ME LE  ++E +G+ +PYE
Sbjct: 125 YAHLLVHGTLHAQGYDHETSETDALEMEALEVLLMEGMGLGNPYE 169


>gi|312127664|ref|YP_003992538.1| hypothetical protein Calhy_1452 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777683|gb|ADQ07169.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 158

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 12/161 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S++  D++ I+ LN 
Sbjct: 1   MKIFIQNQQ--DKVDVDQHISKIIEESIVNTI--KVFLEEENFEISVLIVDNNFIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC--------SSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            YR ++K T+VLSFP     +             + LGDIV++ E    +A   G   E 
Sbjct: 57  NYRNVNKETDVLSFPIFEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAKEFGHSLER 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+ 
Sbjct: 117 EVAYLTVHSVLHLLGFDHIEEDDRKVMRKYEEQILDSMGLT 157


>gi|325133946|gb|EGC56602.1| hypothetical protein TIGR00043 [Neisseria meningitidis M13399]
          Length = 171

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMRAAGFPNPYQED 169


>gi|225075411|ref|ZP_03718610.1| hypothetical protein NEIFLAOT_00416 [Neisseria flavescens
           NRL30031/H210]
 gi|224953229|gb|EEG34438.1| hypothetical protein NEIFLAOT_00416 [Neisseria flavescens
           NRL30031/H210]
          Length = 171

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 2/144 (1%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
           T  ++   +     +      +    ++SL+  D       N +YRG D  TNVLSF   
Sbjct: 26  TAADLPSERDFYRWVWSALKNEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALN 85

Query: 90  FAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                 D  S  + GD+V+  +++  EA   GK  E H  HL IHG LHL+GYDH++D +
Sbjct: 86  EGEILPDQFSDGLYGDLVICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDE 145

Query: 148 ACVMEGLERSILEDLGINDPYEVD 171
           A +ME  E  ++   G  +PY+ D
Sbjct: 146 AEIMEAEEIRLMLAAGFPNPYQED 169


>gi|310815236|ref|YP_003963200.1| Putative metalloprotease [Ketogulonicigenium vulgare Y25]
 gi|308753971|gb|ADO41900.1| Putative metalloprotease [Ketogulonicigenium vulgare Y25]
          Length = 165

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 17/170 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++   +E   W          ++      +             +E+SL+  +  RI  L
Sbjct: 1   MNVDCLIEETRW-------HAVDLDALAVKAAAGVAARLQLPADLEISLLACNDARIAEL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFAS----------SDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N ++RG  KPTNVLS+P+                      +GDI +A+E    EA+  GK
Sbjct: 54  NADFRGKPKPTNVLSWPSEERGARTAGDMPMLPQAGDDPEIGDIAIAFETCAREADEGGK 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             + H+ HL++HG LHLLG+DH  D+DA +MEGLE  IL  +GI DPY  
Sbjct: 114 ALDVHVTHLLVHGCLHLLGFDHERDEDAALMEGLETEILGKMGIADPYSD 163


>gi|237744342|ref|ZP_04574823.1| metal-binding protein [Fusobacterium sp. 7_1]
 gi|256027792|ref|ZP_05441626.1| metal-binding protein [Fusobacterium sp. D11]
 gi|289765747|ref|ZP_06525125.1| metal-binding protein [Fusobacterium sp. D11]
 gi|229431571|gb|EEO41783.1| metal-binding protein [Fusobacterium sp. 7_1]
 gi|289717302|gb|EFD81314.1| metal-binding protein [Fusobacterium sp. D11]
          Length = 163

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 1/131 (0%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  ++          + LSL+ TD+  I+ +N EYR  D PT+V+SF             
Sbjct: 33  IKKVLELEEIESNRPLYLSLLLTDNRNIQVINREYRDKDAPTDVISFAYHETEDFNIGPY 92

Query: 100 M-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++ E +E +A+     FE    +++ HG LH+LGYDH++++D  +M   E +I
Sbjct: 93  DTLGDIIISLERVEEQASEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKIMREREEAI 152

Query: 159 LEDLGINDPYE 169
           L   G    Y+
Sbjct: 153 LFSFGYTRDYK 163


>gi|221064957|ref|ZP_03541062.1| protein of unknown function UPF0054 [Comamonas testosteroni KF-1]
 gi|220709980|gb|EED65348.1| protein of unknown function UPF0054 [Comamonas testosteroni KF-1]
          Length = 152

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 13/158 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           LQ++++   +G         E++    V+  I     V     E+++   D+     LN 
Sbjct: 6   LQLSLQ---FGPSAEAAAHRELLSRSRVTRWIRHALAVD---AEITVRIVDAEEGRKLNR 59

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           EYR  D  TNVL+F             ++ D+VL   ++E EA    K  E H  HL++H
Sbjct: 60  EYRQKDYATNVLTFDYQ------QEPTVMADLVLCAPVVEREAQEQNKTLEEHYAHLLVH 113

Query: 133 GFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           G LH  G+DH   ++DA  ME  E  I++++G  DPY 
Sbjct: 114 GTLHAQGWDHETSEEDAEEMEAYETDIMKEMGYEDPYA 151


>gi|264680424|ref|YP_003280334.1| metal-dependent hydrolase [Comamonas testosteroni CNB-2]
 gi|262210940|gb|ACY35038.1| putative metal-dependent hydrolase [Comamonas testosteroni CNB-2]
          Length = 152

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 13/158 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           LQ++++   +G         E++    V+  I     V     E+++   D+     LN 
Sbjct: 6   LQLSLQ---FGPSAEAAAHRELLSRSRVTRWIRHALAVD---AEITVRIVDAEEGRKLNR 59

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           EYR  D  TNVL+F             ++ D+VL   ++E EA    K  E H  HL++H
Sbjct: 60  EYRKKDYATNVLTFDYQ------QEPTVMADLVLCAPVVEREAQEQNKSLEEHYAHLLVH 113

Query: 133 GFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           G LH  G+DH   ++DA  ME  E  I++++G  DPY 
Sbjct: 114 GTLHAQGWDHETSEEDAEEMEAYETDIMKEMGYEDPYA 151


>gi|255521280|ref|ZP_05388517.1| putative metalloprotease [Listeria monocytogenes FSL J1-175]
          Length = 130

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 10/129 (7%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF----------ASSDGC 96
            Y   E   ELSL FT +  I  +N EYR  D+ T+V+SF                 D  
Sbjct: 1   EYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLE 60

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +  MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +  +M GL++
Sbjct: 61  TPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQK 120

Query: 157 SILEDLGIN 165
            +L+  G+ 
Sbjct: 121 EVLDAYGLE 129


>gi|240122830|ref|ZP_04735786.1| hypothetical protein NgonP_02615 [Neisseria gonorrhoeae PID332]
 gi|268681445|ref|ZP_06148307.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268621729|gb|EEZ54129.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
          Length = 171

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +  GY       ++ L+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKSGYLR----ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH+ D +A 
Sbjct: 88  EILPCQVSERLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY  D
Sbjct: 148 IMEAEEIRLMRAAGYPNPYRED 169


>gi|330469595|ref|YP_004407338.1| metal-binding heat shock protein [Verrucosispora maris AB-18-032]
 gi|328812566|gb|AEB46738.1| metal-binding heat shock protein [Verrucosispora maris AB-18-032]
          Length = 157

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +  D        + V A A   L   G      + ELS++  D   +  L
Sbjct: 1   MSIEIANESGVAVD-------TDAVLAVARHALDEMGV---NPLAELSVLLVDVGYMTEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDIVLAYEIIEIEANVLGKE 121
           N  + G D PT+VL+FP    S D         G    +LGDIVL  E+   +A   G  
Sbjct: 51  NHRWMGGDGPTDVLAFPMDEGSIDHGPGENAAVGGEPALLGDIVLCPEVAAKQAATAGHS 110

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            ++ L  L +HG LHLLGYDH + ++   M GL+  +L   
Sbjct: 111 ADDELHLLTVHGVLHLLGYDHAEPEEEREMFGLQARLLSSW 151


>gi|302871925|ref|YP_003840561.1| hypothetical protein COB47_1283 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574784|gb|ADL42575.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 158

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 12/161 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +   +V+N +    F++E   E+S++  D++ I+ LN 
Sbjct: 1   MKIFIQNQQ--DKVDVDEHISKIIEDSVANTL--KIFLQEENFEVSVLIVDNNFIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC--------SSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            YR ++K T+VLSFP     +             + LGDIV++ E    +A   G   E 
Sbjct: 57  NYRNVNKETDVLSFPIFEFKNGQLQEDIVVVEDEIPLGDIVISIEKALQQAKEFGHSLER 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+ 
Sbjct: 117 EVAYLTVHSVLHLLGFDHIEEDDRKVMRKYEEQILDSMGLT 157


>gi|67920493|ref|ZP_00514013.1| Protein of unknown function UPF0054 [Crocosphaera watsonii WH 8501]
 gi|67857977|gb|EAM53216.1| Protein of unknown function UPF0054 [Crocosphaera watsonii WH 8501]
          Length = 174

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 12/164 (7%)

Query: 13  LQIAVENALWGDEIH---LRTLCEVVFAKAVSNLISKGYFVKE--NIVELSLVFTDSHRI 67
           +++ +++  W +         +    + +          F     +  EL+L  T    I
Sbjct: 11  IELNIQDVFWVNSEQRTIANPISPQTWKQWFQTWCKTLGFHLPVASNYELTLRLTGDKEI 70

Query: 68  ETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           ++LN +YR  ++PT+VL+F       P      D    L LGDI+++ E    +A     
Sbjct: 71  QSLNAQYRQKNQPTDVLAFATLEWDFPVVTPPEDLLEPLYLGDIIISVETARKQAQQQDH 130

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +  L  L  HGFLHLLG+DH D+     M   + ++L  +G+
Sbjct: 131 PLKRELPWLATHGFLHLLGWDHPDEPSLEEMLQQQETLLRLVGL 174


>gi|16803505|ref|NP_464990.1| putative metalloprotease [Listeria monocytogenes EGD-e]
 gi|47095416|ref|ZP_00233026.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           str. 1/2a F6854]
 gi|224500515|ref|ZP_03668864.1| putative metalloprotease [Listeria monocytogenes Finland 1988]
 gi|224501595|ref|ZP_03669902.1| putative metalloprotease [Listeria monocytogenes FSL R2-561]
 gi|254827753|ref|ZP_05232440.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254829776|ref|ZP_05234431.1| putative metalloprotease [Listeria monocytogenes 10403S]
 gi|254898369|ref|ZP_05258293.1| putative metalloprotease [Listeria monocytogenes J0161]
 gi|254912139|ref|ZP_05262151.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936467|ref|ZP_05268164.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284801852|ref|YP_003413717.1| putative metalloprotease [Listeria monocytogenes 08-5578]
 gi|284994994|ref|YP_003416762.1| putative metalloprotease [Listeria monocytogenes 08-5923]
 gi|26006921|sp|Q8Y747|RRMF_LISMO RecName: Full=Probable rRNA maturation factor
 gi|16410894|emb|CAC99543.1| lmo1465 [Listeria monocytogenes EGD-e]
 gi|47016237|gb|EAL07160.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258600132|gb|EEW13457.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258609059|gb|EEW21667.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284057414|gb|ADB68355.1| putative metalloprotease [Listeria monocytogenes 08-5578]
 gi|284060461|gb|ADB71400.1| putative metalloprotease [Listeria monocytogenes 08-5923]
 gi|293590110|gb|EFF98444.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 161

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E     DE   + L E +         +  Y   E   ELSL FT +  I  +
Sbjct: 4   LEIDLLDETKNLLDED--KQLVENILQ------FAAEYLKIEQGTELSLTFTTNEGIREI 55

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF                 D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                L  L +HG LHLLGYDH++  +  VM GL++ +L+  G+ 
Sbjct: 116 TKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLE 160


>gi|291544276|emb|CBL17385.1| conserved hypothetical protein TIGR00043 [Ruminococcus sp. 18P13]
          Length = 166

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
            ++  +    +++  +F  +   E+S+ F  +  I  LN  YR  D  T+VLSFP     
Sbjct: 22  RLLIRRCCQAVLATEHF--DRDAEVSVSFVSNQEIRNLNKIYRNKDSVTDVLSFPLLSDG 79

Query: 93  ----SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKD 147
               +     ++LGD+V++ E    +A+  G   E  +  L +H  LHLLGYDH     D
Sbjct: 80  KADVNQETGYVLLGDVVISLETAFKQAHNFGHSLEREVGFLTVHSMLHLLGYDHETSPLD 139

Query: 148 ACVMEGLERSILEDLGIN 165
              M   E ++LE LGI 
Sbjct: 140 ERKMREKEEAVLEKLGIA 157


>gi|72161249|ref|YP_288906.1| metalloprotease [Thermobifida fusca YX]
 gi|123760864|sp|Q47RN4|RRMF_THEFY RecName: Full=Probable rRNA maturation factor
 gi|71914981|gb|AAZ54883.1| Protein of unknown function UPF0054 [Thermobifida fusca YX]
          Length = 155

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 14/156 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +A E+ +  DE  L  L   +                  + ELS++  D   +  L
Sbjct: 1   MSIDVANESGVPADEERLARLARYILDA----------LRVHPLAELSVLLVDEEPMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGC----SSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  +     PT+VLSFP                +LGD+V+  ++   +A   G   ++ +
Sbjct: 51  HVRWMNEPGPTDVLSFPMDELRPGAPGRTSEPGILGDVVICPQVAARQAERAGHSMQDEI 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  HG LHLLGYDH +  +   M  L+  +L   
Sbjct: 111 DLLCTHGILHLLGYDHAEPDEHREMFSLQNELLAGW 146


>gi|326803484|ref|YP_004321302.1| translation metalloprotein YbeY [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651189|gb|AEA01372.1| translation metalloprotein YbeY [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 158

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------ 97
            +          E+S        I  +N +YRG D+PT+V+SF     S           
Sbjct: 27  AAAKRLELNRETEMSATIVHDDEIHAINRDYRGKDRPTDVISFAINDESEGDSPITEWPE 86

Query: 98  --SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                LGD++++ +  + +A       E  L  L  HGFLHL GYDH++ +D  VM GL+
Sbjct: 87  DLPYELGDLIISLDTAKRQAEEYNHSLERELGFLACHGFLHLNGYDHIEPEDEKVMFGLQ 146

Query: 156 RSILEDLGIN 165
           R IL+  G+ 
Sbjct: 147 REILDAYGLK 156


>gi|46907693|ref|YP_014082.1| metalloprotease [Listeria monocytogenes serotype 4b str. F2365]
 gi|47093470|ref|ZP_00231233.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           str. 4b H7858]
 gi|226224066|ref|YP_002758173.1| hypothetical protein Lm4b_01475 [Listeria monocytogenes Clip81459]
 gi|254824476|ref|ZP_05229477.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254852090|ref|ZP_05241438.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932650|ref|ZP_05266009.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300765608|ref|ZP_07075587.1| hypothetical protein LMHG_12515 [Listeria monocytogenes FSL N1-017]
 gi|59799121|sp|Q71ZK5|RRMF_LISMF RecName: Full=Probable rRNA maturation factor
 gi|259646403|sp|C1KVB2|RRMF_LISMC RecName: Full=Probable rRNA maturation factor
 gi|46880962|gb|AAT04259.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47018146|gb|EAL08916.1| conserved hypothetical protein TIGR00043 [Listeria monocytogenes
           str. 4b H7858]
 gi|225876528|emb|CAS05237.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605389|gb|EEW17997.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293584209|gb|EFF96241.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593714|gb|EFG01475.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513709|gb|EFK40777.1| hypothetical protein LMHG_12515 [Listeria monocytogenes FSL N1-017]
 gi|328465508|gb|EGF36737.1| metal-binding heat shock protein [Listeria monocytogenes 1816]
 gi|328474977|gb|EGF45771.1| metal-binding heat shock protein [Listeria monocytogenes 220]
 gi|332311906|gb|EGJ25001.1| Putative rRNA maturation factor [Listeria monocytogenes str. Scott
           A]
          Length = 161

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E     DE   + L E +         +  Y   E   ELSL FT +  I  +
Sbjct: 4   LEIDLLDETKNLLDED--KQLVENILQ------FAAEYLKIEQGTELSLTFTTNEGIREI 55

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF                 D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                L  L +HG LHLLGYDH++  +  +M GL++ +L+  G+ 
Sbjct: 116 TKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKEVLDAYGLE 160


>gi|319943042|ref|ZP_08017325.1| metal-dependent hydrolase [Lautropia mirabilis ATCC 51599]
 gi|319743584|gb|EFV95988.1| metal-dependent hydrolase [Lautropia mirabilis ATCC 51599]
          Length = 187

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 16/161 (9%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           RL LQI  ++ +   E+           + V   +       E   EL L F        
Sbjct: 40  RLSLQIQFDDTVDPAELPA---SRPQLRRWVQAAL-------EADAELVLRFVGREESRQ 89

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +YRG D+ TNVL+F  A         ++  DIV+   +++ EA+   K   NHL HL
Sbjct: 90  LNHQYRGKDRSTNVLTFDYAH------EPVVQADIVICLPVLQDEAHTQNKPLRNHLAHL 143

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +IHG LH  G DH+ D++A  ME  E  +L    I+DPY +
Sbjct: 144 VIHGVLHAHGMDHLTDEEAAEMESREIELLHRFRIDDPYRL 184


>gi|171464143|ref|YP_001798256.1| protein of unknown function UPF0054 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193681|gb|ACB44642.1| protein of unknown function UPF0054 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 157

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 82/172 (47%), Gaps = 20/172 (11%)

Query: 1   MSVKKVNL-PRL--DLQIAVENALWGDEIHLRTLCE-VVFAKAVSNLISKGYFVKENIVE 56
           MS  +  + P+L  DLQ A        E  L  +    +  K V +    G         
Sbjct: 1   MSTNRKTMSPKLVIDLQYASATI----ESTLGKIASPTLMKKWVKSATPLGGL------- 49

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++L F ++   + LN  +R  D  TNVL+FP A + +D  +     DI+    +++ EA 
Sbjct: 50  ITLRFVNTTEGKKLNLAFRQKDYATNVLTFPYALSKNDLAA-----DIIFCLPVLQKEAK 104

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
              K  + HL HLI+HG LH  GYDH   KDA  ME LE  ILE LG  +PY
Sbjct: 105 EQDKLLKAHLAHLIVHGCLHAQGYDHELTKDAKKMEALEIHILEKLGFANPY 156


>gi|317495248|ref|ZP_07953618.1| hypothetical protein HMPREF0432_00220 [Gemella moribillum M424]
 gi|316914670|gb|EFV36146.1| hypothetical protein HMPREF0432_00220 [Gemella moribillum M424]
          Length = 157

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 7/132 (5%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +    +K   +   I E+SL F     I+ +N +YRG D PT+V+SF       D    +
Sbjct: 24  LLKYAAKHENINTKITEMSLSFVSKEEIQEINRDYRGKDVPTDVISFALNDEIEDEVHII 83

Query: 100 ML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
            L       GDI++  +I   +A      F+  +  L +HGFLHLLGYDH++++D   M 
Sbjct: 84  GLEDEFNSIGDIIICVDIAREQAQEYNHSFDREIGFLAVHGFLHLLGYDHMNEEDEKEMF 143

Query: 153 GLERSILEDLGI 164
             + +ILE+ G+
Sbjct: 144 DKQEAILEEFGL 155


>gi|261378228|ref|ZP_05982801.1| putative metalloprotease [Neisseria cinerea ATCC 14685]
 gi|269145304|gb|EEZ71722.1| putative metalloprotease [Neisseria cinerea ATCC 14685]
          Length = 171

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 2/137 (1%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SD 94
            +            +    ++SL+  D       N +YRG D  TNVLSF         D
Sbjct: 33  KRDFYRWAWSALKDEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPD 92

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
             S  + GD+V+  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A +ME  
Sbjct: 93  QFSDGLYGDLVICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAE 152

Query: 155 ERSILEDLGINDPYEVD 171
           E  ++   G  +PY+ D
Sbjct: 153 EIRLMLAAGFPNPYQED 169


>gi|261855782|ref|YP_003263065.1| hypothetical protein Hneap_1182 [Halothiobacillus neapolitanus c2]
 gi|261836251|gb|ACX96018.1| protein of unknown function UPF0054 [Halothiobacillus neapolitanus
           c2]
          Length = 161

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 7/138 (5%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---- 94
            V   +          V L++ F D     +LN +YR     TNVLSF            
Sbjct: 26  WVEAALDAAN--HWQSVALTVRFVDEEEGLSLNQQYRHKKYATNVLSFSYDAPELPEDMA 83

Query: 95  -GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
            G   + LGD+++   ++  EA    K    H  HL++HG LHLLGYDH    +A  ME 
Sbjct: 84  SGDEPVYLGDLLICMPVVLNEAASQNKIPATHTAHLVVHGVLHLLGYDHEASAEADQMEQ 143

Query: 154 LERSILEDLGINDPYEVD 171
           +E   ++ LG  +PY  D
Sbjct: 144 IEVDAMQKLGFENPYSAD 161


>gi|85374528|ref|YP_458590.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594]
 gi|122544125|sp|Q2N948|RRMF_ERYLH RecName: Full=Probable rRNA maturation factor
 gi|84787611|gb|ABC63793.1| predicted metal-dependent hydrolase [Erythrobacter litoralis
           HTCC2594]
          Length = 161

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/164 (39%), Positives = 80/164 (48%), Gaps = 13/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L+I +E+  W D        E +   A          +    +E S++FT   ++  L
Sbjct: 1   MKLEIEIEH--WPDGE-----WESITGGAAKATRDVEPALAHARLETSVLFTSDEQVHVL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFAS-----SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           N E+R  DKPTNVLSFP                 MLGDI LAYE    EA   G   E H
Sbjct: 54  NREWRERDKPTNVLSFPMLDRDRLRALEPEGPPEMLGDIALAYETCAREAEEKGISLEAH 113

Query: 126 LVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
             HLI+HG LHL G+DHVD D  A  ME LE + L  LGI DPY
Sbjct: 114 ATHLIVHGLLHLAGHDHVDSDAQAEEMEALEIAALAKLGIADPY 157


>gi|74318722|ref|YP_316462.1| hypothetical protein Tbd_2704 [Thiobacillus denitrificans ATCC
           25259]
 gi|123611152|sp|Q3SFF3|RRMF_THIDA RecName: Full=Probable rRNA maturation factor
 gi|74058217|gb|AAZ98657.1| Protein of unknown function UPF0054 [Thiobacillus denitrificans
           ATCC 25259]
          Length = 147

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 15/157 (9%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           +L++AV+ A   D++  R       A A+           E+  E+++   D+   + LN
Sbjct: 4   ELRLAVQFASGADDLPSRAQIRRWVAAAL-----------EHDAEITVRIVDADEAQALN 52

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             YR  D   NVL+F     +     +L+ GD+V+   ++E EA   GK   +H  H+ +
Sbjct: 53  RAYRDKDYVPNVLTFEYGEIAP----ALLGGDVVICAPVVEREAREQGKPLGHHYAHMTV 108

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HG LHL GYDHVD  DA  ME  E +IL+   I  PY
Sbjct: 109 HGVLHLQGYDHVDAADAERMETREAAILKRFHIPHPY 145


>gi|319639195|ref|ZP_07993946.1| metalloprotease [Neisseria mucosa C102]
 gi|317399379|gb|EFV80049.1| metalloprotease [Neisseria mucosa C102]
          Length = 171

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA     + L +  E  F +   + +   Y       ++S
Sbjct: 3   RAKKYPFLSLQRQRFHLNFENA--SSAVDLPS--ERNFYRWAWSALKNEY----RRADIS 54

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF         D  S  + GD+V+  +++  EA+
Sbjct: 55  LILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQFSDGLYGDLVICPQVVLKEAS 114

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 115 EQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 169


>gi|227519870|ref|ZP_03949919.1| metalloprotease [Enterococcus faecalis TX0104]
 gi|229545167|ref|ZP_04433892.1| metalloprotease [Enterococcus faecalis TX1322]
 gi|229549416|ref|ZP_04438141.1| metalloprotease [Enterococcus faecalis ATCC 29200]
 gi|255972120|ref|ZP_05422706.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255975187|ref|ZP_05425773.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256617031|ref|ZP_05473877.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256763105|ref|ZP_05503685.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256853773|ref|ZP_05559138.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256956689|ref|ZP_05560860.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256961294|ref|ZP_05565465.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|257082010|ref|ZP_05576371.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|257084561|ref|ZP_05578922.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|257087443|ref|ZP_05581804.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|257416650|ref|ZP_05593644.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
 gi|257419866|ref|ZP_05596860.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257421946|ref|ZP_05598936.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|293383578|ref|ZP_06629488.1| putative metalloprotease [Enterococcus faecalis R712]
 gi|293387309|ref|ZP_06631865.1| putative metalloprotease [Enterococcus faecalis S613]
 gi|300860151|ref|ZP_07106238.1| translation metalloprotein YbeY [Enterococcus faecalis TUSoD Ef11]
 gi|307277154|ref|ZP_07558258.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX2134]
 gi|307285806|ref|ZP_07565940.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0860]
 gi|307287709|ref|ZP_07567752.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0109]
 gi|307290536|ref|ZP_07570448.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0411]
 gi|312906128|ref|ZP_07765140.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           DAPTO 512]
 gi|312909474|ref|ZP_07768329.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           DAPTO 516]
 gi|312953491|ref|ZP_07772331.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0102]
 gi|227072664|gb|EEI10627.1| metalloprotease [Enterococcus faecalis TX0104]
 gi|229305653|gb|EEN71649.1| metalloprotease [Enterococcus faecalis ATCC 29200]
 gi|229309712|gb|EEN75699.1| metalloprotease [Enterococcus faecalis TX1322]
 gi|255963138|gb|EET95614.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255968059|gb|EET98681.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256596558|gb|EEU15734.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256684356|gb|EEU24051.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256710716|gb|EEU25759.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256947185|gb|EEU63817.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256951790|gb|EEU68422.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256990040|gb|EEU77342.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256992591|gb|EEU79893.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|256995473|gb|EEU82775.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|257158478|gb|EEU88438.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
 gi|257161694|gb|EEU91654.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257163770|gb|EEU93730.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|291079090|gb|EFE16454.1| putative metalloprotease [Enterococcus faecalis R712]
 gi|291083207|gb|EFE20170.1| putative metalloprotease [Enterococcus faecalis S613]
 gi|295113466|emb|CBL32103.1| conserved hypothetical protein TIGR00043 [Enterococcus sp. 7L76]
 gi|300849190|gb|EFK76940.1| translation metalloprotein YbeY [Enterococcus faecalis TUSoD Ef11]
 gi|306498391|gb|EFM67896.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0411]
 gi|306501447|gb|EFM70750.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0109]
 gi|306502567|gb|EFM71834.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0860]
 gi|306506084|gb|EFM75250.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX2134]
 gi|310627774|gb|EFQ11057.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           DAPTO 512]
 gi|310628700|gb|EFQ11983.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0102]
 gi|311290147|gb|EFQ68703.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           DAPTO 516]
 gi|315025401|gb|EFT37333.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX2137]
 gi|315030209|gb|EFT42141.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX4000]
 gi|315032905|gb|EFT44837.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0017]
 gi|315035611|gb|EFT47543.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0027]
 gi|315144803|gb|EFT88819.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX2141]
 gi|315150149|gb|EFT94165.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0012]
 gi|315152158|gb|EFT96174.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0031]
 gi|315155345|gb|EFT99361.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0043]
 gi|315159079|gb|EFU03096.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0312]
 gi|315164808|gb|EFU08825.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX1302]
 gi|315166394|gb|EFU10411.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX1341]
 gi|315170290|gb|EFU14307.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX1342]
 gi|315173675|gb|EFU17692.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX1346]
 gi|327535697|gb|AEA94531.1| putative metalloprotease [Enterococcus faecalis OG1RF]
          Length = 159

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           +D+    E      E            K + NL+  + G+       E+S+ FTD+  I+
Sbjct: 1   MDITFIDETEKVPTEE----------IKEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQ 50

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANV 117
            +N +YRG D PT+V+SF       D                 LGD++++ E    +A  
Sbjct: 51  VINRDYRGKDMPTDVISFALEDEGEDELPIIFDDEELAELPRNLGDLIISTERAAEQAVE 110

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G   E  +  L +HGFLHL GYDH++ +D   M GL++ IL+  G+ 
Sbjct: 111 YGHTLEREMGFLAVHGFLHLNGYDHMEPEDEKEMFGLQKEILDAYGLK 158


>gi|312876030|ref|ZP_07736019.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797228|gb|EFR13568.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 158

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 12/161 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S++  D++ I+ LN 
Sbjct: 1   MKIFIQNQQ--DKVDVDQHISKIIEESIVNTI--KVFLEEENFEISVLIVDNNFIKELNK 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC--------SSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            YR ++K T+VLSFP     +             + LGDIV++ E    +A   G   E 
Sbjct: 57  NYRNVNKETDVLSFPIFEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAEEFGHSLER 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + +L +H  LHLLG+DH++D D  VM   E  IL+ +G+ 
Sbjct: 117 EVAYLTVHSVLHLLGFDHIEDDDRKVMREYEEQILQSMGLT 157


>gi|312793455|ref|YP_004026378.1| hypothetical protein Calkr_1257 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180595|gb|ADQ40765.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 158

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 12/161 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S++  D++ I+ LN 
Sbjct: 1   MKIIIQNQQ--DKVDVDQHISKIIEESIVNTI--KVFLEEENFEISVLIVDNNFIKELNK 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC--------SSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            YR ++K T+VLSFP     +             + LGDIV++ E    +A   G   E 
Sbjct: 57  NYRNVNKETDVLSFPIFEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAEEFGHSLER 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + +L +H  LHLLG+DH++D D  VM   E  IL+ +G+ 
Sbjct: 117 EVAYLTVHSVLHLLGFDHIEDDDRKVMREYEEQILQSMGLT 157


>gi|237738285|ref|ZP_04568766.1| metal-binding protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420165|gb|EEO35212.1| metal-binding protein [Fusobacterium mortiferum ATCC 9817]
          Length = 155

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E    + V  ++ K Y   E  V +SL+FT +  I+ +N EYR  D+PT+V+SF      
Sbjct: 20  EEEIREYVQKVLEKEYES-EAPVYMSLLFTGNDEIQVINREYRDKDQPTDVISFAYHETE 78

Query: 93  SDGCSSLM-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                    LGDIV++ E +  +A       +  L +++ HG LHLLGYDH++++D   M
Sbjct: 79  DFDIGPYDTLGDIVISLERVVEQAKEYNHSDKRELFYVLTHGILHLLGYDHIEEEDKKEM 138

Query: 152 EGLERSILEDLGIN 165
              E  IL   G  
Sbjct: 139 RAKEEEILGSFGYT 152


>gi|295698305|ref|YP_003602960.1| hypothetical protein RIEPE_0079 [Candidatus Riesia pediculicola
           USDA]
 gi|291157124|gb|ADD79569.1| conserved hypothetical protein [Candidatus Riesia pediculicola
           USDA]
          Length = 151

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L    F K +  ++S  YF  E   E+S+       + TLN  YRG D PTNVLSF +  
Sbjct: 19  LNRKRFIKWIDRVLS--YFSSEK--EISIYIASLEEMRTLNRLYRGRDYPTNVLSFSSN- 73

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
               G +   LGD+++ +EI++ EA    K  ++H  H+IIHG LHLLG  H ++ D   
Sbjct: 74  -DMRGFNFSFLGDLIICHEILKKEAKNQRKSIDSHWAHIIIHGCLHLLGIHHQNEIDLKK 132

Query: 151 MEGLERSILEDLGINDPY 168
           ME +E  IL+ LG  +P+
Sbjct: 133 MESMEIKILKRLGYPNPF 150


>gi|15676444|ref|NP_273583.1| hypothetical protein NMB0538 [Neisseria meningitidis MC58]
 gi|26006912|sp|Q9K0P7|RRMF_NEIMB RecName: Full=Probable rRNA maturation factor
 gi|7225763|gb|AAF40967.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|325139809|gb|EGC62342.1| putative metalloprotease [Neisseria meningitidis CU385]
 gi|325200774|gb|ADY96229.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           H44/76]
          Length = 169

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMRAAGFPNPYQED 169


>gi|220932095|ref|YP_002509003.1| conserved hypothetical protein TIGR00043 [Halothermothrix orenii H
           168]
 gi|219993405|gb|ACL70008.1| conserved hypothetical protein TIGR00043 [Halothermothrix orenii H
           168]
          Length = 142

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 8/129 (6%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             + +  +I+K   V++    +S+   D+  I  LN +YR ++ PT+VLSFP        
Sbjct: 19  IKQLIETVINKTAEVEKASGTVSVALVDNKTIAELNSKYRNVEGPTDVLSFPMDED---- 74

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
               +LGDI+++ +    +A+  G   E  L  L +HG LHLLGY+H  D++ CVM   E
Sbjct: 75  ----ILGDIIISIDRARQQADEYGHSLERELGFLTVHGMLHLLGYNHKTDEEKCVMRQKE 130

Query: 156 RSILEDLGI 164
             +L++L +
Sbjct: 131 ERVLKELEL 139


>gi|298293909|ref|YP_003695848.1| hypothetical protein Snov_3959 [Starkeya novella DSM 506]
 gi|296930420|gb|ADH91229.1| protein of unknown function UPF0054 [Starkeya novella DSM 506]
          Length = 172

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/158 (39%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ + VE   W        L       A     S+ Y +  +  E+++  TD   I  L
Sbjct: 7   IEVDVLVEADAWSAFPEAAGLVIRAVDAACEGASSE-YELDIDGAEIAVKLTDDASIRLL 65

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++RG D  TNVLSFPT   +  G     LGDI +A+E +  EA   GK F +HLVHL 
Sbjct: 66  NRDWRGKDYATNVLSFPTPEMARAGGDP-HLGDIAIAFETLAREAAEEGKPFADHLVHLA 124

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLGYDH   +DA  ME +ER +L  LG+ DPY
Sbjct: 125 VHGTLHLLGYDHEVAEDAEEMEAMERRVLAGLGVPDPY 162


>gi|312140288|ref|YP_004007624.1| hypothetical protein REQ_29270 [Rhodococcus equi 103S]
 gi|325677054|ref|ZP_08156724.1| metalloprotease [Rhodococcus equi ATCC 33707]
 gi|311889627|emb|CBH48944.1| conserved hypothetical protein [Rhodococcus equi 103S]
 gi|325552125|gb|EGD21817.1| metalloprotease [Rhodococcus equi ATCC 33707]
          Length = 180

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I+ E+ +   +  L ++   V A+   +             ELS+V  DS  +  L
Sbjct: 1   MSIEISNESGMEVSDEDLISVARFVIARMDVH----------PAAELSMVLVDSSTMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL       +A   G   ++
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPSFALEQAEKAGHSLDH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH + ++   M GL+  +L D 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPEEEKEMFGLQNQLLADW 148


>gi|226360377|ref|YP_002778155.1| metalloprotease [Rhodococcus opacus B4]
 gi|254807287|sp|C1AUK2|RRMF_RHOOB RecName: Full=Probable rRNA maturation factor
 gi|226238862|dbj|BAH49210.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 180

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V A+   +             ELS+V  DS  +  L
Sbjct: 1   MSIEVSNESGMDVSEEELISVARFVIARMDVH----------PAAELSMVLVDSATMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP           S      MLGDIVL       +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDSPEPGPSMLGDIVLCPSFAADQAEKAGHPLAH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH + ++   M GL+  +L+D 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPEEEKEMFGLQNQLLDDW 148


>gi|29376907|ref|NP_816061.1| putative metalloprotease [Enterococcus faecalis V583]
 gi|227553943|ref|ZP_03983990.1| metalloprotease [Enterococcus faecalis HH22]
 gi|46577437|sp|Q831T7|RRMF_ENTFA RecName: Full=Probable rRNA maturation factor
 gi|29344372|gb|AAO82131.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           V583]
 gi|227176929|gb|EEI57901.1| metalloprotease [Enterococcus faecalis HH22]
 gi|315574356|gb|EFU86547.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0309B]
 gi|315580169|gb|EFU92360.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0309A]
          Length = 159

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           +D+    E      E            K + NL+  + G+       E+S+ FTD+  I+
Sbjct: 1   MDITFIDETEKVPTEE----------IKEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQ 50

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANV 117
            +N +YRG D PT+V+SF       D                 LGD++++ E    +A  
Sbjct: 51  MINRDYRGKDMPTDVISFALEDEGEDELPIIFDDEELAELPRNLGDLIISTERAAEQAVE 110

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G   E  +  L +HGFLHL GYDH++ +D   M GL++ IL+  G+ 
Sbjct: 111 YGHTLEREMGFLAVHGFLHLNGYDHMEPEDEKEMFGLQKEILDAYGLK 158


>gi|325141764|gb|EGC64216.1| hypothetical protein TIGR00043 [Neisseria meningitidis 961-5945]
 gi|325197750|gb|ADY93206.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           G2136]
          Length = 171

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMRAAGFPNPYQED 169


>gi|256845042|ref|ZP_05550500.1| metal-binding protein [Fusobacterium sp. 3_1_36A2]
 gi|256718601|gb|EEU32156.1| metal-binding protein [Fusobacterium sp. 3_1_36A2]
          Length = 162

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  ++       +  + LSL+ TD+  I+ +N EYR  D PT+V+SF             
Sbjct: 33  IKKVLELEKVESDRPLYLSLLLTDNENIQVINREYRDKDAPTDVISFAYHETEDFNIGPY 92

Query: 100 M-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++ E +E +A      FE    +++ HG LH+LGYDH++++D  +M   E +I
Sbjct: 93  DTLGDIIISLERVEEQAGEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKIMRKREEAI 152

Query: 159 LEDLGIN 165
           L   G  
Sbjct: 153 LSSFGYT 159


>gi|296314907|ref|ZP_06864848.1| putative metalloprotease [Neisseria polysaccharea ATCC 43768]
 gi|296838092|gb|EFH22030.1| putative metalloprotease [Neisseria polysaccharea ATCC 43768]
          Length = 171

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA      +L +  E  F +   + +   Y       ++S
Sbjct: 3   RAKQYPFLSLQRQRFHLNFENA--SSAANLPS--ERDFYRWAWSALKNEY----RRADIS 54

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF         D  S  + GD+V+  +++  EA 
Sbjct: 55  LILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQFSDGLYGDLVICPQVVLKEAA 114

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              K  E H  HL IHG LHL+GYDH++D +A +ME  E  ++  +G  +PY+ D
Sbjct: 115 EQDKTPEQHFAHLTIHGTLHLMGYDHIEDNEAEIMEAEEIRLMLAVGFPNPYQED 169


>gi|251796244|ref|YP_003010975.1| hypothetical protein Pjdr2_2233 [Paenibacillus sp. JDR-2]
 gi|247543870|gb|ACT00889.1| protein of unknown function UPF0054 [Paenibacillus sp. JDR-2]
          Length = 165

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 19/169 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + LQ+      W +E     + +    +    L   G        E++L FTD+ +I  L
Sbjct: 1   MSLQL-----DWSNEQEKMEIPDQWVERLEQLLQIAGEMEGLTDGEVTLTFTDNEQIHQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFA------------SSDGCSSL--MLGDIVLAYEIIEIEAN 116
           N EYR ID+PT+VLSF                 S D    +  MLGDIV++ E  + ++ 
Sbjct: 56  NREYRNIDRPTDVLSFAMQDEGTEELDIIFEVESEDEIDPISGMLGDIVISVEKAQEQSE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E  +  L +HGFLHLLGYDH+DD     M   + ++L+  G++
Sbjct: 116 DYGHSLEREIGFLFVHGFLHLLGYDHMDDAGEAEMTAKQEAVLQKAGLS 164


>gi|299533016|ref|ZP_07046403.1| putative metal-dependent hydrolase [Comamonas testosteroni S44]
 gi|298719240|gb|EFI60210.1| putative metal-dependent hydrolase [Comamonas testosteroni S44]
          Length = 152

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 13/158 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           LQ++++   +G         E++    V+  I     V     E+++   D+     LN 
Sbjct: 6   LQLSLQ---FGPSAEAAAHRELLSRSRVTRWIRHALAVD---AEITVRIVDTEEGRKLNR 59

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           EYR  D  TNVL+F             ++ D+VL   ++E EA    K  E H  HL++H
Sbjct: 60  EYRKKDYATNVLTFDYH------QEPTVMADLVLCAPVVEREAQEQNKSLEEHYAHLLVH 113

Query: 133 GFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           G LH  G+DH   ++DA  ME  E  I++++G  DPY 
Sbjct: 114 GTLHAQGWDHETSEEDAEEMEAYETDIMKEMGYEDPYA 151


>gi|120404789|ref|YP_954618.1| putative metalloprotease [Mycobacterium vanbaalenii PYR-1]
 gi|145558818|sp|A1TBR2|RRMF_MYCVP RecName: Full=Probable rRNA maturation factor
 gi|119957607|gb|ABM14612.1| protein of unknown function UPF0054 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 184

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V  K   N             ELS++  D+  +  L
Sbjct: 1   MTIEVSNESGIDVSEEELISVARFVIGKMDVN----------PAAELSMLLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G     
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAKQAADAGHTLGQ 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M  L+R +LE+ 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPDEEKEMFALQRELLEEW 148


>gi|157804110|ref|YP_001492659.1| putative metalloprotease [Rickettsia canadensis str. McKiel]
 gi|166227281|sp|A8EZU1|RRMF_RICCK RecName: Full=Probable rRNA maturation factor
 gi|157785373|gb|ABV73874.1| hypothetical protein A1E_04765 [Rickettsia canadensis str. McKiel]
          Length = 172

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 19/175 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    + + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 1   MINVEIIRNYDKWREH---KQINKALIKKVTQNVLLRFDNFSKIKQFELSILLTNTAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTA---------------FASSDGCSSLMLGDIVLAYEIIEI 113
           TLN ++R IDK TNVLSFP+                     G   + LGDI   YE+I  
Sbjct: 58  TLNKQFRNIDKATNVLSFPSNKLNWQDLCFSNVSPKLELLIGYDYMHLGDIAFCYEVIYN 117

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E+    K  ENH +HL+IH  LHL+G+DH +D +A +ME LE  IL   GI  PY
Sbjct: 118 ESYEQQKTSENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEILSYFGIASPY 172


>gi|313668982|ref|YP_004049266.1| hypothetical protein NLA_17020 [Neisseria lactamica ST-640]
 gi|313006444|emb|CBN87907.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 209

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA      +L +  +  F +   + +  GY       ++ 
Sbjct: 41  RAKKYPFLTLQRQRFHLNFENA--SSAANLPSKHD--FYRWAWSALKSGY----RRADIG 92

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++  EA 
Sbjct: 93  LILLDEEAARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVLKEAA 152

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY  D
Sbjct: 153 EQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMRAAGYPNPYRED 207


>gi|303228961|ref|ZP_07315771.1| translation metalloprotein YbeY [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516375|gb|EFL58307.1| translation metalloprotein YbeY [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 158

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 14/164 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +QI+ ++ +  D     T  E V  K V + +S+ Y ++++  ELS++  D+ +I  L
Sbjct: 1   MHIQISYDDGIARD-----TKIEEVIQK-VCDEVSRVYGLEDD--ELSILLCDNKKIHEL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLV 127
           N EYRGID+PT+VLSF          S     +LGD++L+ E    +A   G  FE  L 
Sbjct: 53  NKEYRGIDRPTDVLSFALNEGDDYEGSEEEHHLLGDMILSLERAHEQAVEYGHSFERELA 112

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI---NDPY 168
           +L  H  LH+LGYDH+ D+D   M   E  +L +LG    + PY
Sbjct: 113 YLTTHSCLHILGYDHMTDEDKKEMRTEEEFVLSNLGYVREDQPY 156


>gi|304388236|ref|ZP_07370356.1| metal-dependent hydrolase [Neisseria meningitidis ATCC 13091]
 gi|304337763|gb|EFM03912.1| metal-dependent hydrolase [Neisseria meningitidis ATCC 13091]
          Length = 211

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 72  AERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 127

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 128 EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 187

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 188 IMEAEEIRLMLAAGFPNPYQED 209


>gi|258516221|ref|YP_003192443.1| putative metalloprotease [Desulfotomaculum acetoxidans DSM 771]
 gi|257779926|gb|ACV63820.1| protein of unknown function UPF0054 [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 154

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 5/134 (3%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS- 93
           +  KA    +    +  +   E+SLV TD   I  LN +YRG+D+PT+VLSF        
Sbjct: 21  LLEKAAETAMQVAGYTGQG--EVSLVLTDDRYIHELNRDYRGVDRPTDVLSFAQNEGEQL 78

Query: 94  --DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                +  +LGD++++ E  E +A   G  FE     L +HG LHLL YDH++++D  +M
Sbjct: 79  QAAEEAEELLGDVIISLETAERQAEEYGHSFEREAAFLTVHGVLHLLAYDHIEEEDRVIM 138

Query: 152 EGLERSILEDLGIN 165
              E   +  + + 
Sbjct: 139 RSKEEEAMSRMDLP 152


>gi|302386448|ref|YP_003822270.1| protein of unknown function UPF0054 [Clostridium saccharolyticum
           WM1]
 gi|302197076|gb|ADL04647.1| protein of unknown function UPF0054 [Clostridium saccharolyticum
           WM1]
          Length = 165

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 18/163 (11%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  +  E  L    E +  + V   +   Y       E++++ T +  I  +N EYR +D
Sbjct: 4   NIEYEAEQKLDIPYEDIIKRVVEESLD--YENCPYEAEVNVLITGNEEIRQINREYRDMD 61

Query: 79  KPTNVLSFPTAFAS----------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
            PT+VLSFP                           L+LGDIV++   +E +A   G   
Sbjct: 62  TPTDVLSFPMIEYECPSEFEHLEETADDCFHPETGELLLGDIVISVNKVEEQAEKYGHSQ 121

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              L  L+ H  LHL GYDH+++ +  +ME  +  IL   G  
Sbjct: 122 TRELAFLVAHSMLHLCGYDHMEEDEREIMEKKQEEILSRGGYT 164


>gi|229587097|ref|YP_002845598.1| putative metalloprotease [Rickettsia africae ESF-5]
 gi|259645703|sp|C3PLL5|RRMF_RICAE RecName: Full=Probable rRNA maturation factor
 gi|228022147|gb|ACP53855.1| Putative metal-dependent hydrolase [Rickettsia africae ESF-5]
          Length = 167

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 11/151 (7%)

Query: 29  RTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           + + + +  K   N++ +   F K    ELS++ T++  I TLN ++R I+K TNVLSFP
Sbjct: 17  KQINKSLIKKITQNILLRFDNFSKIKQFELSILLTNAAEILTLNKQFRNIEKATNVLSFP 76

Query: 88  TAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           +               D    + LGDI   YE+I  E+    K FENH +HL+IH  LHL
Sbjct: 77  SNELNWQDLYSKLEFLDDSDYMHLGDIAFCYEVIYNESCEQHKTFENHFIHLLIHSILHL 136

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +G+DH +D +A +ME LE  IL   GI  PY
Sbjct: 137 IGFDHQNDTEANIMENLEIEILSYFGIFPPY 167


>gi|222529265|ref|YP_002573147.1| hypothetical protein Athe_1274 [Caldicellulosiruptor bescii DSM
           6725]
 gi|254800021|sp|B9MRS0|RRMF_ANATD RecName: Full=Probable rRNA maturation factor
 gi|222456112|gb|ACM60374.1| protein of unknown function UPF0054 [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 158

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 12/161 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S++  D+  I+ LN 
Sbjct: 1   MKIFIQNQQ--DKVDIDQHISKIIEESIVNTI--KVFLEEENFEISVLIVDNSFIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC--------SSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            YR ++K T+VLSFP     +             + LGDIV++ E    +A   G   E 
Sbjct: 57  NYRNVNKETDVLSFPIFEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAKEFGHSLER 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+ 
Sbjct: 117 EIAYLTVHSVLHLLGFDHIEEDDRKVMREYEEQILQSMGLT 157


>gi|308069930|ref|YP_003871535.1| hypothetical protein PPE_03178 [Paenibacillus polymyxa E681]
 gi|305859209|gb|ADM70997.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 165

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + LQ+A     W +E +   + E +     + L   G        E++L F +  +I  L
Sbjct: 1   MGLQLA-----WNNEQNDMVINESLITLLNTLLEEAGKVEGVTDGEVALTFVNDEQIHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLMLGDIVLAYEIIEIEAN 116
           N +YRGID+PT+VLSF       +                   +LGDI+++ +  + ++ 
Sbjct: 56  NRDYRGIDRPTDVLSFAMKETLDEELEIIYEPNEENSLNDVPDVLGDIIISVQTAQAQSE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E  +  L +HGFLHLLGYDH DD     M G + ++L   G+ 
Sbjct: 116 EYGHSIEREIGFLFVHGFLHLLGYDHQDDVSEAEMMGKQEAVLAQAGLT 164


>gi|188996202|ref|YP_001930453.1| protein of unknown function UPF0054 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|229557463|sp|B2V7H6|RRMF_SULSY RecName: Full=Probable rRNA maturation factor
 gi|188931269|gb|ACD65899.1| protein of unknown function UPF0054 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 152

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 6/139 (4%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E++ + + +         ++S+      N VE+S+  TD+ RI  +N E+RG DKPT+VL
Sbjct: 15  EVYSKEITKKFLKDITEKILSELNL---NNVEISITLTDNERIREINKEWRGKDKPTDVL 71

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SFP     + G    +LGD++++    + +A  +G      ++ L++HG LHLLGYDH  
Sbjct: 72  SFPQ--DETIGYKYRLLGDVIISLPYAKAQAEEIGLTLREEVLRLLVHGILHLLGYDHET 129

Query: 145 -DKDACVMEGLERSILEDL 162
            ++DA +M  L+  I + L
Sbjct: 130 NEEDAKIMFDLQDKIFDKL 148


>gi|118467556|ref|YP_888768.1| metalloprotease [Mycobacterium smegmatis str. MC2 155]
 gi|166227261|sp|A0R0T0|RRMF_MYCS2 RecName: Full=Probable rRNA maturation factor
 gi|118168843|gb|ABK69739.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 178

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+     E  L ++   V  K   +             ELS+V  DS  +  L
Sbjct: 1   MSIEVSNESGYDVSEPELISVARFVIEKMDVH----------PAAELSMVLLDSAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E  E +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAEQQAAKAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M  L+R +LE+ 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPDEEKEMFALQRQLLEEW 148


>gi|87199002|ref|YP_496259.1| hypothetical protein Saro_0980 [Novosphingobium aromaticivorans DSM
           12444]
 gi|123490218|sp|Q2G9P8|RRMF_NOVAD RecName: Full=Probable rRNA maturation factor
 gi|87134683|gb|ABD25425.1| protein of unknown function UPF0054 [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 167

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 14/173 (8%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++ P L++ I   + +WGD I      ++    A +          EN++ +S+V  D  
Sbjct: 1   MSAPILEMDI---DPVWGDAID---WEDIASRAAEAAAKVAPELAHENLL-VSVVLADDD 53

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLG 119
            +  LN ++R  DKPTNVLSFP            D  +  MLGD++LA+ +   EA   G
Sbjct: 54  EVHALNKQWRAKDKPTNVLSFPMLSREEVLHAAADEGAPGMLGDMILAHGVCTREAAEKG 113

Query: 120 KEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYEVD 171
              E H  HL++HG LHL GYDH   + +A  ME LER  L  +GI DPY V+
Sbjct: 114 VSVETHATHLVVHGLLHLAGYDHELGEAEAEEMENLERKALALMGIADPYAVE 166


>gi|323486952|ref|ZP_08092267.1| hypothetical protein HMPREF9474_04018 [Clostridium symbiosum
           WAL-14163]
 gi|323692000|ref|ZP_08106248.1| hypothetical protein HMPREF9475_01111 [Clostridium symbiosum
           WAL-14673]
 gi|323399724|gb|EGA92107.1| hypothetical protein HMPREF9474_04018 [Clostridium symbiosum
           WAL-14163]
 gi|323503923|gb|EGB19737.1| hypothetical protein HMPREF9475_01111 [Clostridium symbiosum
           WAL-14673]
          Length = 165

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 18/163 (11%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  +  E  L    E +    V+  +   Y       E++++ TD+  I  +N E+R ID
Sbjct: 4   NIEYEAEKKLNLPYESIIEDVVNASLD--YEKCPYEAEVNVILTDNAEIRRINREFRQID 61

Query: 79  KPTNVLSFPTAFAS----------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
            PT+VLSFP                     +     L+LGDIV++ + +E +A   G   
Sbjct: 62  SPTDVLSFPMGDFDVPSDFERMEEQSEDYFNPETGELLLGDIVISVDKVEEQAEKYGHSQ 121

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              L  L+ H  LHL GYDH+++++   ME  +  IL   G  
Sbjct: 122 TRELAFLVAHSMLHLCGYDHMEEQERIAMEKRQEEILSTGGFA 164


>gi|256963579|ref|ZP_05567750.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|257079644|ref|ZP_05574005.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|294780924|ref|ZP_06746278.1| metalloprotein, YbeY family [Enterococcus faecalis PC1.1]
 gi|307270831|ref|ZP_07552119.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX4248]
 gi|307271518|ref|ZP_07552790.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0855]
 gi|312899841|ref|ZP_07759160.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0470]
 gi|256954075|gb|EEU70707.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|256987674|gb|EEU74976.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|294452050|gb|EFG20498.1| metalloprotein, YbeY family [Enterococcus faecalis PC1.1]
 gi|306511790|gb|EFM80788.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX0855]
 gi|306512832|gb|EFM81476.1| hypothetical protein TIGR00043 [Enterococcus faecalis TX4248]
 gi|311293091|gb|EFQ71647.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0470]
          Length = 159

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           +D+    E      E            K + NL+  + G+       E+S+ FTD+  I+
Sbjct: 1   MDITFIDETEKVPTEE----------IKEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQ 50

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANV 117
            +N +YRG D PT+V+SF       D                 LGD++++ E    +A  
Sbjct: 51  VINRDYRGKDMPTDVISFALEDEGEDELPIIFDDEELAELPRNLGDLIISTERAAEQAFE 110

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G   E  +  L +HGFLHL GYDH++ +D   M GL++ IL+  G+ 
Sbjct: 111 YGHTLEREMGFLAVHGFLHLNGYDHMEPEDEKEMFGLQKEILDAYGLK 158


>gi|120612878|ref|YP_972556.1| hypothetical protein Aave_4242 [Acidovorax citrulli AAC00-1]
 gi|145558826|sp|A1TUZ4|RRMF_ACIAC RecName: Full=Probable rRNA maturation factor
 gi|120591342|gb|ABM34782.1| protein of unknown function UPF0054 [Acidovorax citrulli AAC00-1]
          Length = 152

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 20/171 (11%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M++ +++   L LQ A      G E H   L      + + + +S          E+++ 
Sbjct: 1   MALNQLS---LSLQFA---RFPGVEAHRAALPRHAVVRWIRHALSL-------DAEITVR 47

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D+   + LN EYR  D  TNVL+F  A         +++ D+VL   ++E EA    K
Sbjct: 48  IVDAEEGQALNREYRHKDYATNVLTFDYA------QEPVVMADLVLCAPVVEREAREQNK 101

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDD-KDACVMEGLERSILEDLGINDPYEV 170
               H  HL++HG LH  G+DH    +DA  ME  E +I+++LG  DPY  
Sbjct: 102 ALHEHYAHLLVHGTLHAQGWDHETSAEDADEMEAYETAIMQELGFADPYAD 152


>gi|309388931|gb|ADO76811.1| protein of unknown function UPF0054 [Halanaerobium praevalens DSM
           2228]
          Length = 143

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  + +      + + +       +++       +  E+S+ F    +I+ LN +YR  D
Sbjct: 3   NVDFNNSQTAVEIDQEILKLLEKVVVTAAEIEGYSGGEVSIAFVTKAKIKELNNDYRDKD 62

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
             T+VLSFP          + +LGDI+++ +I   +A       +  L +L +HG LHL 
Sbjct: 63  SVTDVLSFPM--------DAEVLGDIIISAQIASEQAQEYKHSLKRELAYLTVHGMLHLF 114

Query: 139 GYDHVDDKDACVMEGLERSILEDLGIN 165
           GYDH   ++   M   E  +L  LGI+
Sbjct: 115 GYDHHGQEEKNEMRQKEERVLTQLGIS 141


>gi|114770162|ref|ZP_01447700.1| hypothetical protein OM2255_11015 [alpha proteobacterium HTCC2255]
 gi|114548999|gb|EAU51882.1| hypothetical protein OM2255_11015 [alpha proteobacterium HTCC2255]
          Length = 172

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 19/167 (11%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
            I +E+  W D   ++ L +  F+     L     +      E+S++  +  +I  LN  
Sbjct: 13  DIVIEDKRWSD-FGIQDLADRTFSIVFDVLNLSKKW------EISILACNDAKIIELNST 65

Query: 74  YRGIDKPTNVLSFPTAFASSD------------GCSSLMLGDIVLAYEIIEIEANVLGKE 121
           +R     TNVLS+P     SD                 +LGDI ++++  E EA      
Sbjct: 66  FRDKPIATNVLSWPAHNLKSDFIGKTPNKPILSNIEENLLGDIAISFDTCEREAVESNLH 125

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           F++H  HL++HG LHLL YDH++D DA +ME LE  +L+ +GI DPY
Sbjct: 126 FKDHTTHLLVHGCLHLLNYDHINDLDALIMEKLETQLLKVMGIADPY 172


>gi|85709121|ref|ZP_01040187.1| predicted metal-dependent hydrolase [Erythrobacter sp. NAP1]
 gi|85690655|gb|EAQ30658.1| predicted metal-dependent hydrolase [Erythrobacter sp. NAP1]
          Length = 161

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 13/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L+I +E+  W +        E +  +A          +  + + +S++FT    + TL
Sbjct: 1   MELEIDLED--WPEGE-----WEALTQRAADAAAGVEPALASDRLSVSILFTSDGEVHTL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASS-----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           N E+R  DKPTNVLSFP    +      +     MLGDI LAYE    EA       ++H
Sbjct: 54  NREWRQRDKPTNVLSFPMMERAELLELGEEGPPAMLGDIALAYETCAREAAEKNIPLDHH 113

Query: 126 LVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
             HLI+HG LHL G+DHV  +++A VME LERS L ++GI DPY
Sbjct: 114 AAHLIVHGLLHLAGHDHVHCEEEAQVMEDLERSALANMGIADPY 157


>gi|67459578|ref|YP_247202.1| putative metalloprotease [Rickettsia felis URRWXCal2]
 gi|75536024|sp|Q4UK98|RRMF_RICFE RecName: Full=Probable rRNA maturation factor
 gi|67005111|gb|AAY62037.1| Conserved hypothetical protein [Rickettsia felis URRWXCal2]
          Length = 167

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    + + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 1   MINVEIIKNYDKWREH---KQINKSLIKKITQNVLLRFDNFSKIKQFELSILLTNTAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           TLN ++R I+K TNVLSFP+                    + LGDI   YE+I  E+   
Sbjct: 58  TLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDYIHLGDIAFCYEVIYNESCEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +HL+IH  LHL+G+DH +D +A +ME LE  IL   GI+ PY
Sbjct: 118 QKNFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEILSYFGISSPY 167


>gi|319947870|ref|ZP_08022057.1| metal-binding heat shock protein [Dietzia cinnamea P4]
 gi|319438476|gb|EFV93409.1| metal-binding heat shock protein [Dietzia cinnamea P4]
          Length = 160

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +  DE  L  +   V A+   +             ELS+   D   +  L
Sbjct: 1   MSIEVANESGVEVDEAELIDVAAFVIARMDVH----------PAAELSITLVDKDTMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP                  MLGDIVL       +A   G    +
Sbjct: 51  HVTWMNLPGPTDVMSFPMDELTPGGRPDLPEPGPAMLGDIVLCPAFAADQAASSGHPLAH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M GL+  +L + 
Sbjct: 111 ELALLTVHGCLHLLGYDHAEPAEEREMFGLQNELLGEW 148


>gi|15604575|ref|NP_221093.1| putative metalloprotease [Rickettsia prowazekii str. Madrid E]
 gi|2073493|emb|CAA72455.1| hypothetical protein [Rickettsia prowazekii]
 gi|3861270|emb|CAA15169.1| unknown [Rickettsia prowazekii]
          Length = 180

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    R + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 14  MINVEIIRNYNKWREH---RKINKGLIKKITQNVLVRFDNFSKIKQFELSILLTNTAEIL 70

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGC----------SSLMLGDIVLAYEIIEIEANVL 118
           TLN ++R I+K TNVLSFP    +                + LGDI   YE+I  E+   
Sbjct: 71  TLNQQFRSIEKATNVLSFPNNELNWHNLYSKLEFLYYSDYMHLGDIAFCYEVIYNESCEQ 130

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +H++IH  LHL+G+DH +D DA +ME LE  IL   GI  PY
Sbjct: 131 QKTFENHFIHMLIHSILHLIGFDHQNDTDANIMESLEIEILSYFGIPSPY 180


>gi|111018251|ref|YP_701223.1| putative metalloprotease [Rhodococcus jostii RHA1]
 gi|123145313|sp|Q0SHC1|RRMF_RHOSR RecName: Full=Probable rRNA maturation factor
 gi|110817781|gb|ABG93065.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 180

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V A+   +             ELS+V  DS  +  L
Sbjct: 1   MSIEVSNESGMDVSEEELISVARFVIARMDVH----------PAAELSMVLVDSATMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP           S      MLGDIVL       +A+  G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDSPEPGPSMLGDIVLCPSFASDQADKAGHPLAH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH + ++   M GL+  +LED 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPEEEKEMFGLQNQLLEDW 148


>gi|260222300|emb|CBA31726.1| Putative metalloprotease Rfer_0737 [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 147

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 15/161 (9%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           LP L L +     +   E H   L      + + N +       E   E+++   D+   
Sbjct: 2   LPELSLSLQF-GKIQDAEKHRDALKRHKVIRWIRNTL-------EVDGEITVRIVDAEEG 53

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           +TLN EYR  D  TNVL+F       D     +  D+VL   ++  EA    K  E H  
Sbjct: 54  QTLNREYRQKDYATNVLTF-------DYTQEPVTADLVLCAPVVAKEAKEQKKTLEAHYA 106

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           H+I+HG LH  G+DH  D+DA VME  E  I+  LG  +PY
Sbjct: 107 HMIVHGTLHAQGWDHELDEDAEVMELRESEIMARLGFKNPY 147


>gi|212696004|ref|ZP_03304132.1| hypothetical protein ANHYDRO_00540 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676991|gb|EEB36598.1| hypothetical protein ANHYDRO_00540 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 154

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 12/158 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +++ ++N    D + L+   E V  + +     K   V E   E+SL F D  +I  LN 
Sbjct: 1   MKLIIDNTTNED-LTLQKDLEKVIKEVL-----KVENVDEKKCEISLSFVDEIKIRDLNK 54

Query: 73  EYRGIDKPTNVLSFPTAFASSD------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           ++R  D+ T+VLSFP     ++          LMLGD+V+  ++   +A  LG  FE  +
Sbjct: 55  DFRQTDRVTDVLSFPIEDFFNEDRKTLLEKPYLMLGDVVICTDVARKQAKELGHSFEREI 114

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++L  H  LHLLGYDH+++ D  +M   E+ ++++LG+
Sbjct: 115 IYLTCHSILHLLGYDHMEEDDKKIMRLKEKQVMKNLGV 152


>gi|326318913|ref|YP_004236585.1| hypothetical protein Acav_4129 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375749|gb|ADX48018.1| protein of unknown function UPF0054 [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 152

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 20/171 (11%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M++ ++N   L LQ A      G + H   L     A+ + + ++          E+++ 
Sbjct: 1   MALNQLN---LSLQFA---RFAGVQAHRDALPRHAVARWIRHALA-------TDAEITVR 47

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
             D+   + LN EYR  D  TNVL+F  A         +++ D+VL   ++E EA    K
Sbjct: 48  IVDAEEGQALNREYRHKDYATNVLTFDYA------QEPVVMADLVLCAPVVEREAREQNK 101

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDD-KDACVMEGLERSILEDLGINDPYEV 170
               H  HL++HG LH  G+DH    +DA  ME  E +I+++LG  DPY  
Sbjct: 102 ALHEHYAHLLVHGTLHAQGWDHETSAEDADEMEAYETAIMQELGFADPYAD 152


>gi|160933318|ref|ZP_02080706.1| hypothetical protein CLOLEP_02163 [Clostridium leptum DSM 753]
 gi|156867195|gb|EDO60567.1| hypothetical protein CLOLEP_02163 [Clostridium leptum DSM 753]
          Length = 169

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 6/145 (4%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E+ + T   ++  +  + ++    F  +   E+S+ F ++ +I  LN  +R +D PT+VL
Sbjct: 15  EVKIPTGLRMLVRRCCNAVLRMENF--QGAAEVSVTFANNEQIHELNKMHRNVDAPTDVL 72

Query: 85  SFPTAFASSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           SFP                +LGDIV++ E    +A   G   +  + +L  H  LHLLGY
Sbjct: 73  SFPMGEDGKYDIDPATNAKILGDIVISMEKAVEQAERFGHTLQREVGYLTAHSMLHLLGY 132

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH +  +   M   E  ++  LG+ 
Sbjct: 133 DHEEPLEKVHMREKEELVMTQLGLP 157


>gi|254991895|ref|ZP_05274085.1| putative metalloprotease [Listeria monocytogenes FSL J2-064]
          Length = 161

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E     DE   + L E +         +  Y   E   ELSL FT +  I  +
Sbjct: 4   LEIDLLDETKNLLDED--KQLVENILQ------FAAEYLKIEQGTELSLTFTTNEGIREI 55

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF                 D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQATDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                L  L +HG LHLLGYDH++  +  +M GL++ +L+  G+ 
Sbjct: 116 TKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKEVLDAYGLE 160


>gi|257869125|ref|ZP_05648778.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257803289|gb|EEV32111.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 158

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF----------PTAFASSD 94
           +  Y       E+S+ F D+  I+ +N +YR  D+PT+V+SF          P  F    
Sbjct: 27  AADYLKLPEDTEMSVTFMDNAAIQVINRDYRDKDQPTDVISFALEEETEEELPIIFDDEM 86

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                 LGDI+++ E  + +A+  G  ++  L  L +HGFLH+ GYDH+  +D   M GL
Sbjct: 87  PAMPRNLGDIMISVERAKEQASEYGHSYDRELGFLALHGFLHINGYDHMTPEDEKEMFGL 146

Query: 155 ERSILEDLGIN 165
           ++ IL+  G+ 
Sbjct: 147 QKEILDAYGLK 157


>gi|237740707|ref|ZP_04571188.1| metal-binding protein [Fusobacterium sp. 2_1_31]
 gi|229422724|gb|EEO37771.1| metal-binding protein [Fusobacterium sp. 2_1_31]
          Length = 161

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVE----LSLVFTDSH 65
            L L  + E         +  L E  +   + N I K   ++E   E    LS++ TD+ 
Sbjct: 2   ELVLDFSCELDNEKYNEFIDKLYEDSY---LENYIKKVLEIEEVKAERPLYLSVLLTDNK 58

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGKEFEN 124
            I+ +N EYR  D PT+V+SF               LGDI+++ E +E +++     FE 
Sbjct: 59  NIQVINREYRDKDAPTDVISFAYHETDDFNIGPYDTLGDIIISLERVEEQSSEYNHSFER 118

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +++ HG LH+LGYDH++++D  VM   E +IL   G  
Sbjct: 119 EFYYVLTHGILHILGYDHIEEEDKKVMREREEAILSSFGYT 159


>gi|261380097|ref|ZP_05984670.1| putative metalloprotease [Neisseria subflava NJ9703]
 gi|284797315|gb|EFC52662.1| putative metalloprotease [Neisseria subflava NJ9703]
          Length = 171

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  SERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  S--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               D  S  + GD+V+  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPDQFSDGLYGDLVICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMLAAGFPNPYQED 169


>gi|329667243|gb|AEB93191.1| putative metal-dependent hydrolase [Lactobacillus johnsonii DPC
           6026]
          Length = 175

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE++     +  +   +S+L+  +K    KEN  E+S+ F  S +I  +N +YRG
Sbjct: 5   DISFNDEVNFLKDSDKDWIPWISDLLLSAKKEIHKENTQEMSINFVSSKKIHEINKKYRG 64

Query: 77  IDKPTNVLSFPTAFA---------SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF              S D      +GD+ L  E+I+  +      F     
Sbjct: 65  KDRPTDVISFAIEDGLDEDFMSAFSDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL GYDH++D +A +M G++  +L + G+ 
Sbjct: 125 YTLVHGYLHLNGYDHIEDDEAKIMFGIQGKVLREYGLP 162


>gi|300361844|ref|ZP_07058021.1| metal-dependent hydrolase [Lactobacillus gasseri JV-V03]
 gi|300354463|gb|EFJ70334.1| metal-dependent hydrolase [Lactobacillus gasseri JV-V03]
          Length = 175

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE++     +  +   ++NL+  +K    KEN  E+S+ F  S +I  +N +YRG
Sbjct: 5   DISFNDEVNFLNNDDKDWIPWITNLLLSAKKEINKENAQEMSINFVSSEKIHEINKKYRG 64

Query: 77  IDKPTNVLSFPTAFA---------SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF              + D      +GD+ L  E+I+  +      F     
Sbjct: 65  KDRPTDVISFAIEDGLDEDFMSAFNDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL G+DH++D +A VM G++  +L + G+ 
Sbjct: 125 YTLVHGYLHLNGFDHIEDDEAKVMFGIQGKVLREYGLP 162


>gi|291542198|emb|CBL15308.1| conserved hypothetical protein TIGR00043 [Ruminococcus bromii
           L2-63]
          Length = 171

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + + T   ++  +  + ++    F  E   E+S+ FTD+  I+ LN +YR  D  T+VLS
Sbjct: 18  VKIPTGIRMLVRRCCNAVLRLEKF--EGSAEISVTFTDNEGIKALNKQYRDKDIETDVLS 75

Query: 86  FPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP        ++    + +LGD+V++ E    +A + G   +  + +L  H  LHLLGYD
Sbjct: 76  FPMGENGVYDTNPETGAQILGDVVISMEKARDQAELFGHSLQREVGYLTAHSVLHLLGYD 135

Query: 142 HVDDKDACVMEGLERSILEDLGIN 165
           H++  +   M   E  ++E LG+ 
Sbjct: 136 HMEKLERVRMREKEELVMEQLGLP 159


>gi|329766982|ref|ZP_08258510.1| hypothetical protein HMPREF0428_00207 [Gemella haemolysans M341]
 gi|328837707|gb|EGF87332.1| hypothetical protein HMPREF0428_00207 [Gemella haemolysans M341]
          Length = 157

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+ +L           +    ++   V   I E+SL F     I+ +N +YRG D PT+V
Sbjct: 8   DDNNLVEDSTKDMLLKLLECAAEYENVDTEITEMSLSFVSKEEIQEINRDYRGKDVPTDV 67

Query: 84  LSFPTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           +SF       D    + L       GD+++  +I   +A      F+  +  L +HGFLH
Sbjct: 68  ISFALNDEVEDEIDIIGLEDEINSIGDVIICVDIAHEQAKEYEHSFDREIGFLAVHGFLH 127

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGI 164
           LLGYDH++++D   M G +  ILE  G+
Sbjct: 128 LLGYDHMNEEDEKEMFGKQDEILEKFGL 155


>gi|116629757|ref|YP_814929.1| metal-dependent hydrolase [Lactobacillus gasseri ATCC 33323]
 gi|238853406|ref|ZP_04643785.1| putative metalloprotease [Lactobacillus gasseri 202-4]
 gi|282851785|ref|ZP_06261148.1| metalloprotein, YbeY/ UPF0054family [Lactobacillus gasseri 224-1]
 gi|311110601|ref|ZP_07711998.1| putative metalloprotease [Lactobacillus gasseri MV-22]
 gi|122273305|sp|Q042Y1|RRMF_LACGA RecName: Full=Probable rRNA maturation factor
 gi|116095339|gb|ABJ60491.1| Predicted metal-dependent hydrolase [Lactobacillus gasseri ATCC
           33323]
 gi|238833978|gb|EEQ26236.1| putative metalloprotease [Lactobacillus gasseri 202-4]
 gi|282557027|gb|EFB62626.1| metalloprotein, YbeY/ UPF0054family [Lactobacillus gasseri 224-1]
 gi|311065755|gb|EFQ46095.1| putative metalloprotease [Lactobacillus gasseri MV-22]
          Length = 175

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE++     +  +   ++NL+  +K    K+N  E+S+ F  S +I  +N +YRG
Sbjct: 5   DISFNDEVNFLKNDDKDWIPWITNLLLSAKKEINKKNAQEMSINFVSSEKIHEINKKYRG 64

Query: 77  IDKPTNVLSFPTAFA---------SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF              + D      +GD+ L  E+I+  +      F     
Sbjct: 65  KDRPTDVISFAIEDGLDEDFMAAFNDDPDFVEDIGDLFLCPEVIKRHSVEYETGFNREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HG+LHL G+DH++D +A VM G++  +L + G+ 
Sbjct: 125 YTLVHGYLHLNGFDHIEDDEAKVMFGIQGKVLREYGLP 162


>gi|332527513|ref|ZP_08403565.1| hypothetical protein RBXJA2T_16287 [Rubrivivax benzoatilyticus JA2]
 gi|332111920|gb|EGJ11898.1| hypothetical protein RBXJA2T_16287 [Rubrivivax benzoatilyticus JA2]
          Length = 147

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +++   D     TLN +YRG D  TNVL+F             ++ D+VL   ++E EA 
Sbjct: 39  IAVRIVDEDEGRTLNRDYRGKDYATNVLTFDYEH------EPEVVADLVLCAPVVEREAA 92

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             G   E H  HL++HG LH  G+DH DD +A  ME  E  +L  LG  DPY 
Sbjct: 93  EQGVTLEAHYAHLLVHGTLHAQGWDHEDDGEAEAMEARETELLAALGFADPYA 145


>gi|296327852|ref|ZP_06870388.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154986|gb|EFG95767.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 162

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  +++      +  + LSL+ TD+  I+ +N EYR  D PT+V+SF             
Sbjct: 33  IKKVLNLEKIESDRPLYLSLLLTDNENIQVINREYRDKDAPTDVISFAYHETEDFNIGPY 92

Query: 100 M-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++ E +E +A+     FE    +++ HG LH+LGYDH++++D  +M   E +I
Sbjct: 93  DTLGDIIISLERVEEQASEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKLMREREEAI 152

Query: 159 LEDLGIN 165
           L   G  
Sbjct: 153 LSSFGYT 159


>gi|312144004|ref|YP_003995450.1| protein of unknown function UPF0054 [Halanaerobium sp.
           'sapolanicus']
 gi|311904655|gb|ADQ15096.1| protein of unknown function UPF0054 [Halanaerobium sp.
           'sapolanicus']
          Length = 143

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 11/151 (7%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I VE     D + +    + + AK +   I+       +  E+S+ F  +  I+ LN +Y
Sbjct: 2   INVEFNDMQDFLEIDQKMKDLLAKVI---ITAAEVEGYSGGEVSVAFVSNEEIKKLNKKY 58

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R ID  T+VLSFP            +LGDI+++ E    +A   G   +  L +L +HG 
Sbjct: 59  RNIDAATDVLSFP--------IDDEVLGDIIISSERAVSQAEEYGHSLKRELAYLTVHGI 110

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LHL GYDH   ++   M   E  IL +L ++
Sbjct: 111 LHLFGYDHHGQEEKNKMRQKEERILTELDLS 141


>gi|227892552|ref|ZP_04010357.1| metal-dependent hydrolase [Lactobacillus ultunensis DSM 16047]
 gi|227865673|gb|EEJ73094.1| metal-dependent hydrolase [Lactobacillus ultunensis DSM 16047]
          Length = 174

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+      +  +   +  L+  +K    K N +E+S+ F D  R   +N +YR 
Sbjct: 5   DITYNDEVGFLDDKKRDWQDWIMKLLLLAKKEIGKTNNLEMSINFVDEDRSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I+  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGEDSIDLAAFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH+  ++A  M G++  +LED G+ 
Sbjct: 125 YTVVHGFLHLNGYDHIKPEEAKEMFGIQGKVLEDYGLP 162


>gi|121634333|ref|YP_974578.1| hypothetical protein NMC0477 [Neisseria meningitidis FAM18]
 gi|166227285|sp|A1KSE7|RRMF_NEIMF RecName: Full=Probable rRNA maturation factor
 gi|120866039|emb|CAM09777.1| hypothetical protein NMC0477 [Neisseria meningitidis FAM18]
 gi|325131788|gb|EGC54489.1| hypothetical protein TIGR00043 [Neisseria meningitidis M6190]
 gi|325137678|gb|EGC60255.1| hypothetical protein TIGR00043 [Neisseria meningitidis ES14902]
          Length = 171

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMLAAGFPNPYQED 169


>gi|315161671|gb|EFU05688.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0645]
          Length = 159

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           +D+    E      E            K + NL+  + G+       E+S+ FTD+  I+
Sbjct: 1   MDITFIDETEKVPTEE----------IKEIENLLQLAAGFLEIAEDTEMSVTFTDNAGIQ 50

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANV 117
            +N +YRG D PT+V+SF       D                 LGD++++ E    +A  
Sbjct: 51  VINRDYRGKDMPTDVISFALEDEGEDELPIIFDDEELAELPRNLGDLIISTERAAEQAFE 110

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G   E  +  L +HGFLHL GYDH++ +D   M GL++ IL+  G+ 
Sbjct: 111 YGHTLEREMGFLAVHGFLHLNGYDHMEPEDEKEMFGLQKEILDAYGLK 158


>gi|241889939|ref|ZP_04777237.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
 gi|241863561|gb|EER67945.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
          Length = 157

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+ +L           +    ++   +   I E+SL F     I+ +N +YRG D PT+V
Sbjct: 8   DDNNLVEDSTKDMLLKLLECAAEYENIDTEITEMSLSFVSKEEIQEINRDYRGKDVPTDV 67

Query: 84  LSFPTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           +SF       D    + L       GD+++  +I   +A      F+  +  L +HGFLH
Sbjct: 68  ISFALNDEVEDEIDIIGLEDEINSIGDVIICVDIAHEQAKEYEHSFDREIGFLAVHGFLH 127

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGI 164
           LLGYDH+ ++D   M G +  ILE  G+
Sbjct: 128 LLGYDHMTEEDEKEMFGKQDEILEKFGL 155


>gi|313893245|ref|ZP_07826820.1| translation metalloprotein YbeY [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313442141|gb|EFR60558.1| translation metalloprotein YbeY [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 158

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 8/140 (5%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
              + V + +S+ Y ++E+  E+S++  D+ +I  LN EYRGID+PT+VLSF        
Sbjct: 19  AIIRKVCDEVSRVYGLEED--EMSILLCDNAKIHELNKEYRGIDRPTDVLSFALNEGDDY 76

Query: 95  GCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             S     +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M
Sbjct: 77  EGSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEM 136

Query: 152 EGLERSILEDLGI---NDPY 168
              E  IL +LG    + PY
Sbjct: 137 RTEEEFILGNLGYVREDAPY 156


>gi|240125026|ref|ZP_04737912.1| hypothetical protein NgonSK_02174 [Neisseria gonorrhoeae SK-92-679]
 gi|254493055|ref|ZP_05106226.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268683613|ref|ZP_06150475.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|226512095|gb|EEH61440.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268623897|gb|EEZ56297.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
          Length = 171

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++ L+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKNEY----RRADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH+ D +A 
Sbjct: 88  EILPCQVSERLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY  D
Sbjct: 148 IMEAEEIRLMRAAGYPNPYRED 169


>gi|172037802|ref|YP_001804303.1| hypothetical protein cce_2889 [Cyanothece sp. ATCC 51142]
 gi|171699256|gb|ACB52237.1| hypothetical protein cce_2889 [Cyanothece sp. ATCC 51142]
          Length = 170

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 10/162 (6%)

Query: 13  LQIAVENALWGDEIHLRT-LCEVVFAKAVS--NLISKGYFVKENIVELSLVFTDSHRIET 69
           + + V++A   +    +T +    + K      +    Y    +  EL+L  T    I +
Sbjct: 9   IDLNVQDAFAVNSNQAQTYISSQTWKKWFQIWGITLLSYLPVASTYELTLRLTGDQEIHS 68

Query: 70  LNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           LN +YR  ++PT+VL+F T            D    L +GDI+++ E  + +A   G   
Sbjct: 69  LNAQYRQKNQPTDVLAFATLEWDFPKITDEPDSSEPLYIGDIIISVETAQKQAQQQGHSL 128

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +  L  L  HGFLHLLG+DH D++    M   + ++L+ +G+
Sbjct: 129 QRELPWLASHGFLHLLGWDHPDEQSLQKMLQQQETLLKIVGL 170


>gi|313903999|ref|ZP_07837379.1| protein of unknown function UPF0054 [Eubacterium cellulosolvens 6]
 gi|313471148|gb|EFR66470.1| protein of unknown function UPF0054 [Eubacterium cellulosolvens 6]
          Length = 181

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 23/171 (13%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +EN     E+ +    E    + V+ ++ +         E+S+ F D   I  +N 
Sbjct: 1   MTINLENEQ---ELEIPFDYEETAGQIVTKILDEE--KCPYEAEVSITFVDDEEIRRVNR 55

Query: 73  EYRGIDKPTNVLSFP------------------TAFASSDGCSSLMLGDIVLAYEIIEIE 114
           E+RGIDK T+VLSFP                   A +       L LGDI+++      +
Sbjct: 56  EFRGIDKVTDVLSFPVTQFTPPADFSILEDDEAAADSFDPESGELQLGDILISVSRAMKQ 115

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           A   G   +  +  LI H  LHL+GYDH+ +++A VME  +   LEDLGI 
Sbjct: 116 AEEYGHSLKREIGFLIAHSVLHLMGYDHMTEEEATVMEKKQARYLEDLGIT 166


>gi|226307220|ref|YP_002767180.1| hypothetical protein RER_37330 [Rhodococcus erythropolis PR4]
 gi|229493192|ref|ZP_04386984.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|259647013|sp|C1A1F6|RRMF_RHOE4 RecName: Full=Probable rRNA maturation factor
 gi|226186337|dbj|BAH34441.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
 gi|229319923|gb|EEN85752.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 180

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V A+   +             ELS+V  DS  +  L
Sbjct: 1   MSIEVSNESGMDISEPELISVARFVIARMDVH----------PAAELSMVLVDSATMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP           S      MLGDIVL       +A+  G    +
Sbjct: 51  HVRWMDLPGPTDVMSFPMDELEPGGRPDSPEPGPSMLGDIVLCPSFAADQADKAGHSLAH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH + ++   M GL+ S+LE+ 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPEEEKEMFGLQNSLLEEW 148


>gi|330823171|ref|YP_004386474.1| metalloprotease ybeY [Alicycliphilus denitrificans K601]
 gi|329308543|gb|AEB82958.1| metalloprotease ybeY [Alicycliphilus denitrificans K601]
          Length = 150

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 22/170 (12%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M++  +    L LQ A + +      H   L     A+ + + ++          E+++ 
Sbjct: 1   MALNHLT---LSLQFARDAS-----THRAALPRHKVARWIRHALAV-------DAEITVR 45

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
              S     LN E+R  D  TNVL+F             +L D+VL   ++E EA   GK
Sbjct: 46  IVGSEEGRRLNREFRRKDYATNVLTFDYQ------QEPTVLADLVLCAPVVEREAREQGK 99

Query: 121 EFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
             + H  HL++HG LH  G+DH   ++DA  ME  E  I+ +LG  DPY 
Sbjct: 100 TLQEHYAHLLVHGALHAQGWDHETGEQDAQEMEAYETEIMRELGFADPYA 149


>gi|121595993|ref|YP_987889.1| hypothetical protein Ajs_3702 [Acidovorax sp. JS42]
 gi|145558816|sp|A1WC38|RRMF_ACISJ RecName: Full=Probable rRNA maturation factor
 gi|120608073|gb|ABM43813.1| protein of unknown function UPF0054 [Acidovorax sp. JS42]
          Length = 152

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 20/171 (11%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M++ +++   L LQ A +        H  TL     A+ + + ++          E+++ 
Sbjct: 1   MALNQLS---LSLQFARDAEAT---AHRATLPRHAVARWIRHALAV-------DAEITVR 47

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
              +   + LN E+R  D  TNVL+F            + + D+VL   ++E EA    K
Sbjct: 48  IVGAEEGQRLNREFRHKDYATNVLTFDYQQ------EPVAVADLVLCAPVVEREAREQNK 101

Query: 121 EFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYEV 170
             E H  HL++HG LH  G+DH   ++DA  ME  E +IL++LG  DPY  
Sbjct: 102 TLEEHYAHLLVHGTLHAQGWDHETSEQDAQEMEAYETAILQELGFADPYAA 152


>gi|325956929|ref|YP_004292341.1| metalloprotease [Lactobacillus acidophilus 30SC]
 gi|325333494|gb|ADZ07402.1| Metalloprotease [Lactobacillus acidophilus 30SC]
 gi|327183709|gb|AEA32156.1| metalloprotease [Lactobacillus amylovorus GRL 1118]
          Length = 174

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+      +  +   +  L+  +K    K+N +E+S+ F D  R   +N +YR 
Sbjct: 5   DITYNDEVGFLDDKKRDWQDWIMKLLLLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I+  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGEDSIDLAAFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH+   +A  M G++  +LED G+ 
Sbjct: 125 YTVVHGFLHLNGYDHIKPDEAKEMFGIQGKVLEDYGLP 162


>gi|257090602|ref|ZP_05584963.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|312905134|ref|ZP_07764255.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0635]
 gi|256999414|gb|EEU85934.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|310631524|gb|EFQ14807.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0635]
 gi|315146687|gb|EFT90703.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX4244]
 gi|315579038|gb|EFU91229.1| conserved hypothetical protein TIGR00043 [Enterococcus faecalis
           TX0630]
 gi|323481401|gb|ADX80840.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 159

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 23/168 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           +D+    E      E            K + NL+  + G+       E+S+ FTD+  I+
Sbjct: 1   MDITFIDETEKVPTEE----------IKEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQ 50

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANV 117
            +N +YRG D PT+V+SF       +                 LGD++++ E    +A  
Sbjct: 51  VINRDYRGKDMPTDVISFALEDEGENELPIIFDDEELAELPRNLGDLIISTERAAEQAVE 110

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G   E  +  L +HGFLHL GYDH++ +D   M GL++ IL+  G+ 
Sbjct: 111 YGHTLEREMGFLAVHGFLHLNGYDHMEPEDEKEMFGLQKEILDAYGLK 158


>gi|253997234|ref|YP_003049298.1| hypothetical protein Mmol_1868 [Methylotenera mobilis JLW8]
 gi|253983913|gb|ACT48771.1| protein of unknown function UPF0054 [Methylotenera mobilis JLW8]
          Length = 145

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 23/163 (14%)

Query: 8   LPRL--DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +P+L   +Q A +          R   +                      E+++   D+ 
Sbjct: 1   MPKLAATIQYASDADNIPSASLFRKWAKAALRV---------------DTEVTIRIVDAA 45

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
             ++LN  YRG D  TNVL+FP            ++GDI++   ++  EA    K  E H
Sbjct: 46  EGQSLNNTYRGKDYATNVLTFPLTE------EPYLMGDIIICAPVVAAEAEAQHKSLEAH 99

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             HL +HG LHL GYDH  +  A +MEGLE +I+  LG   PY
Sbjct: 100 YAHLTVHGILHLHGYDHEIEAQAELMEGLETAIVTKLGYASPY 142


>gi|325143901|gb|EGC66213.1| hypothetical protein TIGR00043 [Neisseria meningitidis M01-240013]
 gi|325206610|gb|ADZ02063.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           M04-240196]
          Length = 171

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMLAAGFPNPYQED 169


>gi|319761297|ref|YP_004125234.1| hypothetical protein Alide_0577 [Alicycliphilus denitrificans BC]
 gi|317115858|gb|ADU98346.1| protein of unknown function UPF0054 [Alicycliphilus denitrificans
           BC]
          Length = 150

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 22/170 (12%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M++  +    L LQ A + A      H   L     A+ + + ++          E+++ 
Sbjct: 1   MALNHLT---LSLQFARDAA-----THRAALPRHKVARWIRHALAV-------DAEITVR 45

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
              S     LN E+R  D  TNVL+F             +L D+VL   ++E EA   GK
Sbjct: 46  IVGSEEGRRLNREFRRKDYATNVLTFDYQ------QEPTVLADLVLCAPVVEREAREQGK 99

Query: 121 EFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
             + H  HL++HG LH  G+DH   ++DA  ME  E  I+ +LG  DPY 
Sbjct: 100 TLQEHYAHLLVHGALHAQGWDHETGEQDAQEMEAYETEIMRELGFADPYA 149


>gi|296166307|ref|ZP_06848744.1| probable metalloprotease [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898316|gb|EFG77885.1| probable metalloprotease [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 177

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V A+   N             ELS+V  D+  +  L
Sbjct: 1   MSIEVSNESGVDVSETELISVARFVIARMDVN----------PAAELSMVLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A+  G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAGQADAAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 111 ELALLTIHGVLHLLGYDHGEPDEEKEMFALQDRLLEEW 148


>gi|238019234|ref|ZP_04599660.1| hypothetical protein VEIDISOL_01098 [Veillonella dispar ATCC 17748]
 gi|237863933|gb|EEP65223.1| hypothetical protein VEIDISOL_01098 [Veillonella dispar ATCC 17748]
          Length = 158

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 8/140 (5%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
              + V + +S+ Y ++E+  E+S++  D+ +I  LN EYRGID+PT+VLSF        
Sbjct: 19  AVIRKVCDEVSRVYGLEED--EMSILLCDNAKIHELNKEYRGIDRPTDVLSFALNEGDDY 76

Query: 95  GCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             S     +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M
Sbjct: 77  EGSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEM 136

Query: 152 EGLERSILEDLGI---NDPY 168
              E  IL +LG    + PY
Sbjct: 137 RTEEEFILGNLGYVREDAPY 156


>gi|237741714|ref|ZP_04572195.1| metal-binding protein [Fusobacterium sp. 4_1_13]
 gi|294785672|ref|ZP_06750960.1| metalloprotease [Fusobacterium sp. 3_1_27]
 gi|229429362|gb|EEO39574.1| metal-binding protein [Fusobacterium sp. 4_1_13]
 gi|294487386|gb|EFG34748.1| metalloprotease [Fusobacterium sp. 3_1_27]
          Length = 162

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  ++       +  + LSL+ TD+  I+ +N EYR  D PT+V+SF             
Sbjct: 33  IKKVLELEEVESDRPLYLSLLLTDNENIQIINREYRDKDAPTDVISFAYHETEDFNIGPY 92

Query: 100 M-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++ E +E +A      FE    +++ HG LH+LGYDH++++D  +M   E +I
Sbjct: 93  DTLGDIIISLERVEEQAGEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKIMRKREEAI 152

Query: 159 LEDLGIN 165
           L   G  
Sbjct: 153 LSSFGYT 159


>gi|218439664|ref|YP_002377993.1| hypothetical protein PCC7424_2713 [Cyanothece sp. PCC 7424]
 gi|218172392|gb|ACK71125.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 7424]
          Length = 180

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 12/176 (6%)

Query: 1   MSVKKVNLPRLDLQIAVENALW----GDEIHLRTLCEVVFAKAVSNLIS--KGYFVKENI 54
           M +  +    L L + +++  +     +E     +    +       +          + 
Sbjct: 1   MRITFLKHSTLTLDLNLQDVYFCNTSTEETPTAPISSETWQSWFQTWLDILLPTLKSADS 60

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAY 108
            ELSL  TD   I+  N +YR  ++PT+VL+F                  L LGDI+++ 
Sbjct: 61  CELSLRLTDDQEIQFYNAQYRHKNQPTDVLAFAALEVDVPNLINESFDEPLYLGDIIISI 120

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +  + +A   G      L  L  HGFLHLLG+DH DD+    M   + ++L ++G+
Sbjct: 121 DTAKRQATEQGHSLTQELAWLAAHGFLHLLGWDHPDDESLSAMLAQQETLLNNIGL 176


>gi|315645981|ref|ZP_07899102.1| hypothetical protein PVOR_11039 [Paenibacillus vortex V453]
 gi|315278742|gb|EFU42056.1| hypothetical protein PVOR_11039 [Paenibacillus vortex V453]
          Length = 165

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 19/169 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + LQ+A     W +E     + E   A   + L   G        E+ L F D  +I  L
Sbjct: 1   MSLQLA-----WNNEQEEFHIGEEFIAVLEAILQKAGEAEGVTDGEVDLTFVDDGQIHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLMLGDIVLAYEIIEIEAN 116
           N EYRGID+PT+VLSF     ++D                   +LGDI+++ +  ++++ 
Sbjct: 56  NREYRGIDRPTDVLSFAMNEITNDELEIIYELDEGEELESVPDVLGDIIISVQRAKLQSE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E  L  L +HGFLHLLGYDH D+     M G + ++L ++G+ 
Sbjct: 116 EYGHSLERELGFLFVHGFLHLLGYDHQDEASEAAMMGKQEAVLAEVGLT 164


>gi|303231491|ref|ZP_07318221.1| translation metalloprotein YbeY [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513834|gb|EFL55846.1| translation metalloprotein YbeY [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 158

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 14/164 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +QI+ ++ +  D        E V  K V + +S+ Y ++ +  ELS++  D+ +I  L
Sbjct: 1   MHIQISYDDGIAKDAN-----IEEVIQK-VCDEVSRVYGLEND--ELSILLCDNKKIHEL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLV 127
           N EYRGID+PT+VLSF          S     +LGD++L+ E    +A   G  FE  L 
Sbjct: 53  NKEYRGIDRPTDVLSFALNEGDDYEGSEEEHHLLGDMILSLERAHEQAVEYGHSFERELA 112

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI---NDPY 168
           +L  H  LH+LGYDH+ D+D   M   E  +L +LG    + PY
Sbjct: 113 YLTTHSCLHILGYDHMTDEDKKEMRTEEEFVLSNLGYVREDQPY 156


>gi|157964881|ref|YP_001499705.1| putative metalloprotease [Rickettsia massiliae MTU5]
 gi|157844657|gb|ABV85158.1| Putative metal-dependent hydrolase [Rickettsia massiliae MTU5]
          Length = 177

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    + + + +  K   N++ +   F K    ELS++ T+   I 
Sbjct: 11  MINVEIVRNYNKWREH---KQINKSLIKKITQNILLRFDNFSKIKQCELSILLTNVAEIL 67

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           TLN ++R I+K TNVLSFP+                    + LGDI   YE+I  E+   
Sbjct: 68  TLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDYMHLGDIAFCYEVIYNESCEQ 127

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +HL+IH  LHL+G+DH +D +A +ME LE  IL   GI  PY
Sbjct: 128 QKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEILSYFGIFSPY 177


>gi|329770521|ref|ZP_08261899.1| metalloprotease [Gemella sanguinis M325]
 gi|328836270|gb|EGF85939.1| metalloprotease [Gemella sanguinis M325]
          Length = 157

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 7/148 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+ +L           +    +K   +  +I E+SL F +   I+ +N +YRG D PT+V
Sbjct: 8   DDDNLVQDSTKNMLLELLESAAKHENINTDITEMSLSFVNKEEIQEINRDYRGKDVPTDV 67

Query: 84  LSFPTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           +SF          S + L       GD+++  +I + +A      F+  +  L +HGFLH
Sbjct: 68  ISFALNDEVESEISIIGLEDEINSIGDVIICVDIAKEQAEDYNHSFDREIGFLAVHGFLH 127

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGI 164
           LLGYDH+  +D   M   +  ILE+ G+
Sbjct: 128 LLGYDHMTPEDEKEMFEKQDKILEEFGL 155


>gi|186475179|ref|YP_001856649.1| hypothetical protein Bphy_0410 [Burkholderia phymatum STM815]
 gi|238689444|sp|B2JD86|RRMF_BURP8 RecName: Full=Probable rRNA maturation factor
 gi|184191638|gb|ACC69603.1| protein of unknown function UPF0054 [Burkholderia phymatum STM815]
          Length = 153

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/163 (35%), Positives = 78/163 (47%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            P+L L +       W +   L           V+  I    F      EL++ F D+  
Sbjct: 4   APKLSLNLQFPAGKAWPEHKSLLP------KATVAAWIKAALFAD---AELTVRFVDADE 54

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
             TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EAN  GK    H 
Sbjct: 55  GRTLNRTYRGKDYATNVLTFAYAESEDDPVT----GDLILCCPVVEKEANEQGKPLGAHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH D+ +A  ME +E  +L  LG  DPYE
Sbjct: 111 AHLLVHGTLHAQGYDHEDEDEAEEMEAIETEVLGKLGFPDPYE 153


>gi|261401807|ref|ZP_05987932.1| putative metalloprotease [Neisseria lactamica ATCC 23970]
 gi|269208047|gb|EEZ74502.1| putative metalloprotease [Neisseria lactamica ATCC 23970]
          Length = 171

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA      +L +  +  F +   + +  GY       ++S
Sbjct: 3   RAKKYPFLTLQRQRFHLNFENA--SSAANLPSKHD--FYRWAWSALKSGY----RRADIS 54

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF      +  C  S  + GD+++  +++  EA 
Sbjct: 55  LILLDEEAARAYNCDYRGKDYATNVLSFALNEGETLPCQVSEKLYGDLIICPQVVLKEAA 114

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY  D
Sbjct: 115 EQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMRAAGYPNPYRED 169


>gi|325661630|ref|ZP_08150254.1| hypothetical protein HMPREF0490_00988 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472157|gb|EGC75371.1| hypothetical protein HMPREF0490_00988 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 164

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 21/162 (12%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E   +      R L E V A+AV       Y       E++L+ T +  I  +N ++R I
Sbjct: 7   EEGAYQLPFDCRKLAEKVIAEAVD------YEQCPYETEVNLLLTMNEEIREMNRQFREI 60

Query: 78  DKPTNVLSFPT---------AFASSD------GCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D+ T+VLSFP           F   D          LMLGDIV++ E +  +A   G   
Sbjct: 61  DRATDVLSFPMVDYGTPGDFEFLEEDDSYFHPESGELMLGDIVISKEKVTAQAEEYGHTE 120

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E     L+ H  LHL GYDH+++ +  VME  +R ILE L I
Sbjct: 121 EREFAFLVAHSMLHLFGYDHMEEDERAVMEQKQREILERLNI 162


>gi|239998277|ref|ZP_04718201.1| Putative metalloprotease NGO0145 [Neisseria gonorrhoeae 35/02]
          Length = 171

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++ L+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKNEYLR----ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH+ D +A 
Sbjct: 88  EILPCQVSERLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY  D
Sbjct: 148 IMEAEEIRLMRAAGYPNPYRED 169


>gi|240013460|ref|ZP_04720373.1| hypothetical protein NgonD_02219 [Neisseria gonorrhoeae DGI18]
 gi|240015899|ref|ZP_04722439.1| hypothetical protein NgonFA_01822 [Neisseria gonorrhoeae FA6140]
 gi|240080039|ref|ZP_04724582.1| hypothetical protein NgonF_01825 [Neisseria gonorrhoeae FA19]
 gi|240112248|ref|ZP_04726738.1| hypothetical protein NgonM_01454 [Neisseria gonorrhoeae MS11]
 gi|240114993|ref|ZP_04729055.1| hypothetical protein NgonPID1_01852 [Neisseria gonorrhoeae PID18]
 gi|240117278|ref|ZP_04731340.1| hypothetical protein NgonPID_02274 [Neisseria gonorrhoeae PID1]
 gi|240120531|ref|ZP_04733493.1| hypothetical protein NgonPI_01904 [Neisseria gonorrhoeae PID24-1]
 gi|240127539|ref|ZP_04740200.1| hypothetical protein NgonS_02629 [Neisseria gonorrhoeae SK-93-1035]
 gi|260441192|ref|ZP_05795008.1| hypothetical protein NgonDG_08936 [Neisseria gonorrhoeae DGI2]
 gi|268598309|ref|ZP_06132476.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268600661|ref|ZP_06134828.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268602973|ref|ZP_06137140.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268685916|ref|ZP_06152778.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|145572757|sp|Q5FA84|RRMF_NEIG1 RecName: Full=Probable rRNA maturation factor
 gi|268582440|gb|EEZ47116.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268584792|gb|EEZ49468.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268587104|gb|EEZ51780.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268626200|gb|EEZ58600.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 171

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++ L+  D       N +YRG D  TNVLSF     
Sbjct: 32  AERDFYRWAWSALKNEYLR----ADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH+ D +A 
Sbjct: 88  EILPCQVSERLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY  D
Sbjct: 148 IMEAEEIRLMRAAGYPNPYRED 169


>gi|295398010|ref|ZP_06808066.1| metal-dependent hydrolase [Aerococcus viridans ATCC 11563]
 gi|294973768|gb|EFG49539.1| metal-dependent hydrolase [Aerococcus viridans ATCC 11563]
          Length = 158

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 8/129 (6%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-------- 96
           + GY      ++LSL   +   I  +N  YR ID+PT+V+SF       D          
Sbjct: 28  AAGYLKLTGEIDLSLTIVNDAEIHEINKTYRNIDRPTDVISFAIEDLGEDELAVMGLPED 87

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LGD+ ++ +    +A   G  FE  L  L +HGFLHL GYDH+++ D   M GL++
Sbjct: 88  MPRELGDLFISIDKAREQAADYGHSFERELGFLAVHGFLHLNGYDHMNEVDEKEMFGLQK 147

Query: 157 SILEDLGIN 165
            IL+  G+ 
Sbjct: 148 EILDAYGLK 156


>gi|269798052|ref|YP_003311952.1| hypothetical protein Vpar_0991 [Veillonella parvula DSM 2008]
 gi|269094681|gb|ACZ24672.1| protein of unknown function UPF0054 [Veillonella parvula DSM 2008]
          Length = 158

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 8/140 (5%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
              + V + +S+ Y ++E+  E+S++  D+ +I  LN EYRGID+PT+VLSF        
Sbjct: 19  AIIRKVCDEVSRVYGLEED--EMSILLCDNAKIHELNKEYRGIDRPTDVLSFALNEGDDY 76

Query: 95  GCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             S     +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D++   M
Sbjct: 77  EGSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEEKKEM 136

Query: 152 EGLERSILEDLGI---NDPY 168
              E  IL +LG    + PY
Sbjct: 137 RTEEEFILGNLGYVREDAPY 156


>gi|163857969|ref|YP_001632267.1| putative metalloprotease [Bordetella petrii DSM 12804]
 gi|226701660|sp|A9I000|RRMF_BORPD RecName: Full=Probable rRNA maturation factor
 gi|163261697|emb|CAP43999.1| conserved hypothetical protein [Bordetella petrii]
          Length = 155

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 52/161 (32%), Positives = 69/161 (42%), Gaps = 8/161 (4%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P L L +         E  L       +A+   +  ++    +    ELSL         
Sbjct: 3   PELSLSV----QYGVAEPRLPRWRLRRWAQRALDGAARDGLAECARAELSLRLVGQAEGR 58

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F               GDIV+   ++  EA   GK   +H  H
Sbjct: 59  RLNHAYRERDYATNVLTFEYGTDPL----GTARGDIVICVPVLAREAREQGKTLLDHAAH 114

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           L +HG LH LGYDH+  +DA  ME LE +IL  + I DPY 
Sbjct: 115 LTVHGVLHALGYDHIKARDARRMEALETAILTGMRIADPYA 155


>gi|322383672|ref|ZP_08057423.1| metalloprotease-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321151884|gb|EFX44827.1| metalloprotease-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 170

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 19/162 (11%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           W +E  +  + +    +    L   G        E++L F ++  I  LN +YRGID+PT
Sbjct: 7   WTNEQEVLDMKQEWIDRLEQLLALAGKEEGIEDGEVTLTFVNNDMIHELNRQYRGIDRPT 66

Query: 82  NVLSFPTAFASSDGCSS-------------------LMLGDIVLAYEIIEIEANVLGKEF 122
           +VLSF       D                         LGDI+++      +A   G  F
Sbjct: 67  DVLSFAMQEMGEDELIISYGELDEDGIEAVLEDKIVEPLGDIIISIPKTIEQAEEYGHSF 126

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E  L  L +HGFLHL+GYDH  + +   M   +  IL   G+
Sbjct: 127 ERELGFLFVHGFLHLVGYDHQTEDEEKKMFAKQELILSQAGL 168


>gi|144899563|emb|CAM76427.1| Uncharacterized protein family UPF005 [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 172

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 8/165 (4%)

Query: 10  RLDLQIAVENALWGDEIH-LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
            +D+ I++E+  W   +     LC  +    ++ L + G       VE+S+V T    + 
Sbjct: 4   EIDVAISIEDEAWTQALPGAEELCRTMV---LATLQAAGGDFDGPPVEVSVVLTSDTAVH 60

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGC---SSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            LN ++RG DKPTNVLSF             + ++LGD+++AY +   EA   GK   +H
Sbjct: 61  ALNRDWRGQDKPTNVLSFAGLDDDEAPVVVGAPVLLGDVIMAYGVCTQEARDQGKTLAHH 120

Query: 126 LVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDLGINDPYE 169
             HL++HG LHLLG+DH  D+ +A  ME LE  IL   GI DPY 
Sbjct: 121 AAHLVVHGTLHLLGWDHEEDETEAEEMERLETVILSGFGIADPYA 165


>gi|293607163|ref|ZP_06689505.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292814497|gb|EFF73636.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 160

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 4/123 (3%)

Query: 46  KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIV 105
           K   V  +  ELSL    +     LN ++R  D  TNVL+F      +     +  GDIV
Sbjct: 36  KDGLVDFSAAELSLRLVGAAEGRRLNRDFRQRDYATNVLTFEYGVDPA----GVARGDIV 91

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +   ++  EA    K    H  HL IHG LH LGYDH+  +DA  M+ LE + L  +GI 
Sbjct: 92  MCVPVLVREAREQRKPLLEHAAHLTIHGVLHSLGYDHIKARDAKRMDALETATLAQMGIA 151

Query: 166 DPY 168
           DPY
Sbjct: 152 DPY 154


>gi|167772060|ref|ZP_02444113.1| hypothetical protein ANACOL_03434 [Anaerotruncus colihominis DSM
           17241]
 gi|167665858|gb|EDS09988.1| hypothetical protein ANACOL_03434 [Anaerotruncus colihominis DSM
           17241]
          Length = 170

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 7/146 (4%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           ++ + +   ++  +    ++    F      E+S+ F ++ +I  LN EYR  D PT+VL
Sbjct: 15  DVKIPSGIRLLIRRCCHAVLVAENF--HESAEISVSFVNNEQIRQLNAEYRQKDAPTDVL 72

Query: 85  SFPTA----FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           SFP      +  +    +L LGDIV++ E    +A + G   +  +  L +H  LHLLGY
Sbjct: 73  SFPLGSGGKYDRNMETGALQLGDIVISVEKAVEQARMYGHSLQREIGFLTVHSMLHLLGY 132

Query: 141 DHVDDK-DACVMEGLERSILEDLGIN 165
           DH     +   M   E S+L  LG+ 
Sbjct: 133 DHEAGGLEMVRMREKEESVLASLGLE 158


>gi|319795922|ref|YP_004157562.1| hypothetical protein Varpa_5295 [Variovorax paradoxus EPS]
 gi|315598385|gb|ADU39451.1| protein of unknown function UPF0054 [Variovorax paradoxus EPS]
          Length = 152

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++   D+   + LN E+RG D  TNVL+F  A       S + + D+VL   ++  EA
Sbjct: 43  EITVRIVDADEGQRLNREFRGKDYATNVLTFDYAQ------SPVAMADLVLCAPVVAREA 96

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
               K    H  HL++HG LH  G+DH   + DA  ME  E  IL +LGI DPY
Sbjct: 97  KEQRKTLAAHYAHLLVHGTLHAQGWDHETSEADADEMEAYEIQILAELGIRDPY 150


>gi|326203510|ref|ZP_08193374.1| protein of unknown function UPF0054 [Clostridium papyrosolvens DSM
           2782]
 gi|325986330|gb|EGD47162.1| protein of unknown function UPF0054 [Clostridium papyrosolvens DSM
           2782]
          Length = 161

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 15/162 (9%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +EN     ++ +    E +  K +   +       +   E+S++  D + I  +N E+
Sbjct: 2   IIIENGQ--AKVIIDKKIENLIEKTIKMCMKSEQL--DKDYEVSVLIVDDNEIRDINREH 57

Query: 75  RGIDKPTNVLSFPT-----------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           R IDK T+VLSFP                      L+LGDI+++ E  + +A   G  F+
Sbjct: 58  RDIDKSTDVLSFPLVDFKDGKLISDEGDYDLEMGELILGDIIISAETAQRQAEAYGHSFD 117

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             +  L  H   HLLGYDH++  +  +M   +  IL+++G+ 
Sbjct: 118 REMAFLTAHSCFHLLGYDHMEKNEEEIMFKKQEDILKEMGLP 159


>gi|261393091|emb|CAX50688.1| conserved hypothetical protein [Neisseria meningitidis 8013]
 gi|325202673|gb|ADY98127.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           M01-240149]
 gi|325203629|gb|ADY99082.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           M01-240355]
 gi|325207581|gb|ADZ03033.1| conserved hypothetical protein TIGR00043 [Neisseria meningitidis
           NZ-05/33]
          Length = 171

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  SERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMLAAGFPNPYQED 169


>gi|300024988|ref|YP_003757599.1| hypothetical protein Hden_3487 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526809|gb|ADJ25278.1| protein of unknown function UPF0054 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 171

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)

Query: 4   KKVNLPR-LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
            + ++PR +++ +  ++  W        L     A     L             +++  +
Sbjct: 5   PQPSIPRVIEVDVVEDDGDWSSLPDAPDLIARAAAAVAQELGDSDGSGL-----VAVALS 59

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
               +E LN ++RG  KPTNVLSFP    + D      +GD++LA E +  EA+  G   
Sbjct: 60  SDASVEVLNGQFRGKPKPTNVLSFPAGEGAPDD----FIGDVILAAETVRREADEQGVSP 115

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E+HL HL++HG LHL G+DH+   +A  ME +E SIL  LG+ +PY
Sbjct: 116 EHHLQHLVVHGILHLFGFDHMSADEAEHMEAIEISILSKLGVANPY 161


>gi|58337484|ref|YP_194069.1| hypothetical protein LBA1202 [Lactobacillus acidophilus NCFM]
 gi|227904120|ref|ZP_04021925.1| metal-dependent hydrolase [Lactobacillus acidophilus ATCC 4796]
 gi|62901404|sp|Q5FJT6|RRMF_LACAC RecName: Full=Probable rRNA maturation factor
 gi|58254801|gb|AAV43038.1| hypothetical protein LBA1202 [Lactobacillus acidophilus NCFM]
 gi|227868139|gb|EEJ75560.1| metal-dependent hydrolase [Lactobacillus acidophilus ATCC 4796]
          Length = 174

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+      +  +   +  L+  +K    K+N +E+S+ F +  R   +N +YR 
Sbjct: 5   DITYNDEVGFLDDEKRDWKTWIMKLLLLAKKEIGKDNNLEMSINFVNEDRSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I   +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGEDSIDLAAFKDDPDFQEDIGDLFMCPSVISRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + I+HGFLHL GYDH++  +A  M G++  +LED G+ 
Sbjct: 125 YTIVHGFLHLNGYDHIEPDEAKEMFGIQGKVLEDYGLP 162


>gi|282850279|ref|ZP_06259658.1| metalloprotein, YbeY/ UPF0054 family [Veillonella parvula ATCC
           17745]
 gi|282579772|gb|EFB85176.1| metalloprotein, YbeY/ UPF0054 family [Veillonella parvula ATCC
           17745]
          Length = 158

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 8/140 (5%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
              + V + +S+ Y ++E+  E+S++  D+ +I  LN EYRGID+PT+VLSF        
Sbjct: 19  AVIRKVCDEVSRVYGLEED--EMSILLCDNAKIHKLNKEYRGIDRPTDVLSFALNEGDDY 76

Query: 95  GCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             S     +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M
Sbjct: 77  EGSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEM 136

Query: 152 EGLERSILEDLGI---NDPY 168
              E  IL +LG    + PY
Sbjct: 137 RIEEEFILGNLGYVREDAPY 156


>gi|325681532|ref|ZP_08161057.1| translation metalloprotein YbeY [Ruminococcus albus 8]
 gi|324106799|gb|EGC01090.1| translation metalloprotein YbeY [Ruminococcus albus 8]
          Length = 170

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 11/156 (7%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I+ E       + +R L        +       Y    N  E+S+ F +  +I  LN E+
Sbjct: 8   ISNEQTEVKIPVGIRMLVRRCCHAVLE------YESFGNDAEVSVSFVNDSQIHELNKEH 61

Query: 75  RGIDKPTNVLSFPTAFAS----SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           R ID+ T+VLSFP         +    + +LGDIV++ E    +A V G   E  +  L 
Sbjct: 62  RNIDRSTDVLSFPLGEDGVYDINYETGASLLGDIVISLETATKQAQVYGHSLEREVGFLT 121

Query: 131 IHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGIN 165
           +H  LHLLGYDH +      +M   E +ILE LGI+
Sbjct: 122 VHSMLHLLGYDHEESSLQERIMREKEEAILEQLGIS 157


>gi|19704081|ref|NP_603643.1| metal-binding protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|26006903|sp|Q8R5X4|RRMF_FUSNN RecName: Full=Probable rRNA maturation factor
 gi|19714281|gb|AAL94942.1| Hypothetical Metal-Binding Protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 162

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 1/127 (0%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  +++      +  + LSL+ TD+  I+ +N EYR  D PT+V+SF           S 
Sbjct: 33  IKKVLNLEKIESDRPLYLSLLLTDNENIQVINREYRDKDAPTDVISFAYHETEDFNIGSY 92

Query: 100 M-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++ E +E +A+     FE    +++ HG LH+LGYDH++++D  +M   E +I
Sbjct: 93  DTLGDIIISLERVEEQASEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKLMREREEAI 152

Query: 159 LEDLGIN 165
           L   G  
Sbjct: 153 LSSFGYT 159


>gi|283797897|ref|ZP_06347050.1| putative metalloprotease [Clostridium sp. M62/1]
 gi|291074362|gb|EFE11726.1| putative metalloprotease [Clostridium sp. M62/1]
 gi|295091897|emb|CBK78004.1| conserved hypothetical protein TIGR00043 [Clostridium cf.
           saccharolyticum K10]
 gi|295115184|emb|CBL36031.1| conserved hypothetical protein TIGR00043 [butyrate-producing
           bacterium SM4/1]
          Length = 165

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 23/171 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +QI      +  E  L    E +  + V  L +  Y       E++++ TD   I  +
Sbjct: 1   MTIQI-----EYEAEKKLNLPYETIIREVV--LAALDYEACPYEAEVNVLLTDDEEIHRI 53

Query: 71  NFEYRGIDKPTNVLSFPTAFAS----------------SDGCSSLMLGDIVLAYEIIEIE 114
           N E+RGID+ T+VLSFP A                   +     L+LGDIV++ + +E +
Sbjct: 54  NREFRGIDRATDVLSFPMADYEQPAEFEKLEERPEDYFNPETGELLLGDIVISVDKVEEQ 113

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           A   G      L  L  H  LHL GYDH+++++  VME  + +IL   G  
Sbjct: 114 AEKYGHSEARELAFLTAHSMLHLFGYDHMEEEERLVMEKKQEAILSLKGYT 164


>gi|294793789|ref|ZP_06758926.1| putative metalloprotease [Veillonella sp. 3_1_44]
 gi|294455359|gb|EFG23731.1| putative metalloprotease [Veillonella sp. 3_1_44]
          Length = 158

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 8/140 (5%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
              + V + +S+ Y + E+  E+S++  ++ +I  LN EYRGID+PT+VLSF        
Sbjct: 19  AVIRKVCDEVSRVYGLDED--EMSILLCNNAKIHELNKEYRGIDRPTDVLSFALNEGDDY 76

Query: 95  GCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             S     +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M
Sbjct: 77  EGSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEM 136

Query: 152 EGLERSILEDLGI---NDPY 168
              E  IL +LG    + PY
Sbjct: 137 RTEEEFILGNLGYVREDAPY 156


>gi|121603421|ref|YP_980750.1| hypothetical protein Pnap_0508 [Polaromonas naphthalenivorans CJ2]
 gi|145558831|sp|A1VJK1|RRMF_POLNA RecName: Full=Probable rRNA maturation factor
 gi|120592390|gb|ABM35829.1| protein of unknown function UPF0054 [Polaromonas naphthalenivorans
           CJ2]
          Length = 151

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 15/160 (9%)

Query: 12  DLQIAVENALWGDE-IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
            L ++++   + D  +H   L     A+ + + +       ++  E+++    +   + L
Sbjct: 5   SLSLSLQFGKFPDAALHRAALPRHSVARWIRHAL-------QSDAEITVRIVGAEEGQAL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YR  D  TNVL+F    A        +  D+VL   ++  EA    K  + H  HL+
Sbjct: 58  NRDYRAKDYATNVLTFDYTQA------PYVTADLVLCAPVVAKEAQDNQKTLQAHYAHLL 111

Query: 131 IHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           +HG LH  GYDH   ++DA  ME LE  IL  LG ++PY 
Sbjct: 112 VHGTLHAQGYDHETGEEDAEEMEALEIEILAGLGFDNPYR 151


>gi|331084774|ref|ZP_08333862.1| hypothetical protein HMPREF0987_00165 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410868|gb|EGG90290.1| hypothetical protein HMPREF0987_00165 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 164

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/162 (33%), Positives = 75/162 (46%), Gaps = 21/162 (12%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E   +      R L E V A+AV       Y       E++L+ T +  I  +N E+R I
Sbjct: 7   EEGAYQLPFDCRKLAEKVIAEAVD------YEQCPYETEVNLLLTMNEEIREMNREFREI 60

Query: 78  DKPTNVLSFPT---------AFASSD------GCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D+ T+VLSFP           F   D          LMLGDIV++ E +  +A   G   
Sbjct: 61  DRATDVLSFPMVDYGTPGDFEFLEEDDSYFHPESGELMLGDIVISKEKVTAQAEEYGHTE 120

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           E     L+ H  LHL GYDH+++ +  VME  +R ILE L I
Sbjct: 121 EREFAFLVAHSMLHLFGYDHMEEDERAVMEQKQREILERLNI 162


>gi|326386703|ref|ZP_08208324.1| hypothetical protein Y88_2596 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208756|gb|EGD59552.1| hypothetical protein Y88_2596 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 164

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/171 (35%), Positives = 81/171 (47%), Gaps = 14/171 (8%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P L++ I   + +W +      L       A        +        +SLV  D  
Sbjct: 1   MTAPTLEIDI---DPVWSETTDWENLANAAAQAAAKVAPELAHESML----VSLVLADDE 53

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
            +  LN ++R  DKPTNVLSFP         A+    +  MLGD++LA+ +   EA   G
Sbjct: 54  EVHELNKQWRAKDKPTNVLSFPMLSREEVLSAAEAPDAPAMLGDLILAHGVCAREAVEKG 113

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
              + H  HLI+HG LHL GYDH   + DA  MEGLER  L  LGI DPY 
Sbjct: 114 VTQDAHTSHLIVHGLLHLAGYDHETGEADAEEMEGLERKALALLGIADPYA 164


>gi|15893065|ref|NP_360779.1| putative metalloprotease [Rickettsia conorii str. Malish 7]
 gi|238650628|ref|YP_002916480.1| putative metalloprotease [Rickettsia peacockii str. Rustic]
 gi|26006916|sp|Q92GI1|RRMF_RICCN RecName: Full=Probable rRNA maturation factor
 gi|259646950|sp|C4K1I1|RRMF_RICPU RecName: Full=Probable rRNA maturation factor
 gi|15620268|gb|AAL03680.1| unknown [Rickettsia conorii str. Malish 7]
 gi|238624726|gb|ACR47432.1| putative metalloprotease [Rickettsia peacockii str. Rustic]
          Length = 167

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    + + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 1   MINVEIVRNYNKWREH---KQINKSLIKKITQNILLRFDNFSKIKQFELSILLTNAAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           TLN ++R I+K TNVLSFP+                    + LGDI   YE+I  E+   
Sbjct: 58  TLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDYMHLGDIAFCYEVIYNESCEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +HL+IH  LHL+G+DH +D +A +ME LE  IL   GI  PY
Sbjct: 118 HKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEILSYFGIFPPY 167


>gi|241759364|ref|ZP_04757470.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|241320500|gb|EER56797.1| conserved hypothetical protein [Neisseria flavescens SK114]
          Length = 171

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/175 (32%), Positives = 82/175 (46%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA      +L +  E  F +   + +   Y        +S
Sbjct: 3   RAKQYPFLSLQRQRFHLNFENA--SSAANLPS--ERDFYRWTWSALKNEY----RRAGIS 54

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF         D  S  + GD+V+  +++  EA 
Sbjct: 55  LILLDEEEARDYNRDYRGKDYATNVLSFALNEGEILPDQFSDGLYGDLVICPQVVLKEAA 114

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY+ D
Sbjct: 115 EQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQED 169


>gi|225848714|ref|YP_002728877.1| hypothetical protein SULAZ_0899 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644244|gb|ACN99294.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 150

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 81/138 (58%), Gaps = 6/138 (4%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E++ + + +    KAV  ++     ++   +E+S+  TD+  I+++N E+R  DKPT+VL
Sbjct: 10  EVYDKEITKEFVKKAVEQILKN---LQLENIEISITLTDNDTIKSINKEWRNKDKPTDVL 66

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SFP  F  + G    +LGD++++    + +A  +G  ++  +V L+ HG LHLLGYDH  
Sbjct: 67  SFP--FGDTIGYKYRVLGDVIISLPYAKKQAQEIGFSYKQEIVRLLTHGILHLLGYDHET 124

Query: 145 -DKDACVMEGLERSILED 161
            ++DA VM  L+  I E 
Sbjct: 125 NEEDAKVMFNLQDKIFEK 142


>gi|294791926|ref|ZP_06757074.1| putative metalloprotease [Veillonella sp. 6_1_27]
 gi|294457156|gb|EFG25518.1| putative metalloprotease [Veillonella sp. 6_1_27]
          Length = 158

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 8/140 (5%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
              + V + +S+ Y ++E+  E+S++  ++ +I  LN EYRGID+PT+VLSF        
Sbjct: 19  AVIRKVCDEVSRVYGLEED--EMSILLCNNAKIHELNKEYRGIDRPTDVLSFALNEGDDY 76

Query: 95  GCSSL---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             S     +LGD++++ E    +A   G  FE  L +L  H  LH+LGYDH++D+D   M
Sbjct: 77  EGSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCLHILGYDHMNDEDKKEM 136

Query: 152 EGLERSILEDLGI---NDPY 168
              E  IL +LG    + PY
Sbjct: 137 RTEEEFILGNLGYVREDAPY 156


>gi|209517502|ref|ZP_03266342.1| protein of unknown function UPF0054 [Burkholderia sp. H160]
 gi|209502035|gb|EEA02051.1| protein of unknown function UPF0054 [Burkholderia sp. H160]
          Length = 153

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/163 (35%), Positives = 79/163 (48%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            P+L L +    A  W +   L           V+  I    F      EL++ F D+  
Sbjct: 4   APKLTLNLQFPAAKAWPEHKALLP------RATVAGWIKAALFAD---GELTIRFVDAEE 54

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
             TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EA   GK    H 
Sbjct: 55  GRTLNRTYRGKDYATNVLTFAYAESEDDPVT----GDLILCCPVVEQEAAEQGKPLAAHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH  +++A  ME LE  IL+ LG  DPY+
Sbjct: 111 AHLLVHGTLHAQGYDHEVEEEAEEMEALETEILDKLGFPDPYQ 153


>gi|312622489|ref|YP_004024102.1| hypothetical protein Calkro_1427 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202956|gb|ADQ46283.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 158

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 12/161 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I ++N    D++ +      +  +++ N I    F++E   E+S+   D+  I+ LN 
Sbjct: 1   MKIFIQNQQ--DKVDIDQHISKIIEESIVNTI--KVFLEEENFEISVFIVDNSFIKELNR 56

Query: 73  EYRGIDKPTNVLSFPTAFASSDGC--------SSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            YR ++K T+VLSFP     +             + LGDIV++ E    +A   G   E 
Sbjct: 57  NYRNVNKETDVLSFPIFEFKNGKLLEDIVIMEDEIPLGDIVISIEKAAQQAKEFGHSLER 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + +L +H  LHLLG+DH+++ D  VM   E  IL+ +G+ 
Sbjct: 117 EIAYLTVHSVLHLLGFDHIEEDDRKVMREYEEQILQSMGLT 157


>gi|121610982|ref|YP_998789.1| hypothetical protein Veis_4066 [Verminephrobacter eiseniae EF01-2]
 gi|145558824|sp|A1WQ64|RRMF_VEREI RecName: Full=Probable rRNA maturation factor
 gi|121555622|gb|ABM59771.1| protein of unknown function UPF0054 [Verminephrobacter eiseniae
           EF01-2]
          Length = 154

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENALWGDEIHLRT-LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           +P   L ++++   +      R+ L   +  + + + ++          E+++    +  
Sbjct: 1   MPLKPLALSLQWGRFDAAAAQRSALPRHLIRRWIRHALT-------TDAEITVRIVGADE 53

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
              LN  YR  D  TNVL+F  + A       L+  D++L   +IE EA   GK  + H 
Sbjct: 54  GRQLNRTYRNKDYATNVLTFVYSQA------PLVTADLLLCAPVIEREAQQQGKHLQAHY 107

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            H+++HG LH  G+DH    DA  M+  E  I++ LG  DPY 
Sbjct: 108 AHMLVHGTLHAQGWDHEGSADADAMQARETQIMQALGFADPYA 150


>gi|309379621|emb|CBX21792.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 171

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA      +L +  +  F +   + +  GY       ++ 
Sbjct: 3   RAKKYPFLTLQRQRFHLNFENA--SSAANLPSKHD--FYRWAWSALKSGY----RRADIG 54

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF         C  S  + GD+++  +++  EA 
Sbjct: 55  LILLDEEAARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVLKEAA 114

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL IHG LHL+GYDH++D +A +ME  E  ++   G  +PY  D
Sbjct: 115 EQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMRAAGYPNPYRED 169


>gi|325135872|gb|EGC58484.1| hypothetical protein TIGR00043 [Neisseria meningitidis M0579]
          Length = 171

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F +   + +   Y       ++SL+  D       N +YRG D  TNVLSF     
Sbjct: 32  SERDFYRWAWSALKNEY----RRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEG 87

Query: 92  SSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               C  S  + GD+++  +++  EA   GK  E H  HL IHG LHL+GYDH++D +A 
Sbjct: 88  EILPCQVSEKLYGDLIICPQVVLKEAAEQGKTPERHFTHLTIHGVLHLMGYDHIEDDEAE 147

Query: 150 VMEGLERSILEDLGINDPYEVD 171
           +ME  E  ++   G  +PY+ D
Sbjct: 148 IMEAEEIRLMLAAGFPNPYQED 169


>gi|22299128|ref|NP_682375.1| putative metalloprotease [Thermosynechococcus elongatus BP-1]
 gi|29428189|sp|Q8DIK0|RRMF_THEEB RecName: Full=Probable rRNA maturation factor
 gi|22295310|dbj|BAC09137.1| tlr1585 [Thermosynechococcus elongatus BP-1]
          Length = 160

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 2/146 (1%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D      +  + + +     ++     +  + EL+L  T    I+ LN +YR  D PT+V
Sbjct: 11  DPALPAEVTALPWERWFRTWMAMVEPTQGKVYELTLRLTTDAAIQALNQQYRDRDTPTDV 70

Query: 84  LSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           L+F T   +          LGDI+++ +    +A   G      +  L  HG LHLLG+D
Sbjct: 71  LAFATRDGALPLPLGEPEYLGDIIISGDTARRQAAESGHTLSIEIAWLACHGLLHLLGWD 130

Query: 142 HVDDKDACVMEGLERSILEDLGINDP 167
           H D+ +   M   +   LE +G+  P
Sbjct: 131 HPDEAELARMLTQQAQCLEAVGLTPP 156


>gi|309790640|ref|ZP_07685193.1| protein of unknown function UPF0054 [Oscillochloris trichoides DG6]
 gi|308227306|gb|EFO80981.1| protein of unknown function UPF0054 [Oscillochloris trichoides DG6]
          Length = 161

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 5/116 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLAYEI 110
            E+ ++ TD   I TLN +YRG+D PT+VLSF      S     G     LGDI ++Y+ 
Sbjct: 43  CEVGVLITDDAHIHTLNRDYRGVDAPTDVLSFADDGPPSAFVVAGSGPRYLGDIAISYQR 102

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGIN 165
           +  +A   G      L +L  HG LHLLGYDH    +DA  M   E +++ +LG++
Sbjct: 103 VLAQAAEYGHSPARELAYLATHGTLHLLGYDHERGPEDAAAMRLREETVMAELGLS 158


>gi|172056859|ref|YP_001813319.1| hypothetical protein Exig_0822 [Exiguobacterium sibiricum 255-15]
 gi|229890252|sp|B1YL70|RRMF_EXIS2 RecName: Full=Probable rRNA maturation factor
 gi|171989380|gb|ACB60302.1| protein of unknown function UPF0054 [Exiguobacterium sibiricum
           255-15]
          Length = 158

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 8/153 (5%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N    DE  L T  ++   +A+    +    ++ N  ELS+ F  +  I+ +N E+RG D
Sbjct: 2   NIYMTDEGKLLTEEQLKLVEAILVYTATEEKIEANS-ELSVTFVTNDEIQQINREWRGKD 60

Query: 79  KPTNVLSFPTAFASSDGC-------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
           + T+V+SF       D           ++LGD++++ E    +A   G  FE  L  L +
Sbjct: 61  QATDVISFAMDELGEDEIDFELLEDEPVVLGDLIISVERCREQAAEYGNHFERELGFLAV 120

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           HGFLHLLGYDH++  D  +M   +  IL    +
Sbjct: 121 HGFLHLLGYDHIEKADEDIMTKRQEEILHHFEL 153


>gi|331001260|ref|ZP_08324886.1| translation metalloprotein YbeY [Parasutterella excrementihominis
           YIT 11859]
 gi|329568987|gb|EGG50783.1| translation metalloprotein YbeY [Parasutterella excrementihominis
           YIT 11859]
          Length = 156

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 9/142 (6%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +L    ++     +   IS+     EN  ++++ F +      LN  YR  D  TNVL+F
Sbjct: 13  NLAHFPQLPSRSKIQRWISRAL---ENDAQITVRFVEEEEGRELNKTYRSKDYATNVLTF 69

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                       ++  D+V+   ++E E+    K  E H+ HL++HG LH  GYDH+DD+
Sbjct: 70  DYQ------IEPVVEADLVICVPVLEKESKDQNKTLEEHMAHLLVHGTLHAQGYDHMDDE 123

Query: 147 DACVMEGLERSILEDLGINDPY 168
           +A VME  E  +L DLG + PY
Sbjct: 124 EAEVMEQRETDVLVDLGFDVPY 145


>gi|241766518|ref|ZP_04764382.1| protein of unknown function UPF0054 [Acidovorax delafieldii 2AN]
 gi|241363251|gb|EER58810.1| protein of unknown function UPF0054 [Acidovorax delafieldii 2AN]
          Length = 152

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)

Query: 13  LQIAVENALWGDEIHLRT-LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           L ++++   + D    R  L      + + + ++          E+++   D+   + LN
Sbjct: 6   LSLSLQFGRFEDAAAHRAVLPRHKVTRWIRHALAA-------DAEITVRIVDADEGQALN 58

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
            +YR  D  TNVL+F  A         +++ D+VL   ++E EA    K  E H  HL++
Sbjct: 59  RDYRHKDYATNVLTFDYAQ------EPVVMADLVLCAPVVEREAREQNKTLEEHYAHLLV 112

Query: 132 HGFLHLLGYDHVDDK-DACVMEGLERSILEDLGINDPYE 169
           HG LH  G+DH     DA  ME  E  IL+ LG  DPY 
Sbjct: 113 HGTLHAQGWDHETSATDAEEMEAYETDILQALGFADPYA 151


>gi|227878695|ref|ZP_03996609.1| metal-dependent hydrolase [Lactobacillus crispatus JV-V01]
 gi|256843289|ref|ZP_05548777.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256850354|ref|ZP_05555782.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262046498|ref|ZP_06019460.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US]
 gi|293380656|ref|ZP_06626707.1| metalloprotein, YbeY/ UPF0054family [Lactobacillus crispatus 214-1]
 gi|295693064|ref|YP_003601674.1| metalloprotease [Lactobacillus crispatus ST1]
 gi|312978180|ref|ZP_07789924.1| putative metalloprotease [Lactobacillus crispatus CTV-05]
 gi|227861710|gb|EEJ69315.1| metal-dependent hydrolase [Lactobacillus crispatus JV-V01]
 gi|256614709|gb|EEU19910.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256712751|gb|EEU27744.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260573369|gb|EEX29927.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US]
 gi|290922784|gb|EFD99735.1| metalloprotein, YbeY/ UPF0054family [Lactobacillus crispatus 214-1]
 gi|295031170|emb|CBL50649.1| Metalloprotease [Lactobacillus crispatus ST1]
 gi|310894898|gb|EFQ43968.1| putative metalloprotease [Lactobacillus crispatus CTV-05]
          Length = 174

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+      +  +   +  L+  +K    K+N +E+S+ F D  R   +N +YR 
Sbjct: 5   DITYNDEVGFLDDEKRNWQDWIMKLLLLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I+  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGEDSIDLAAFADDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + I+HGFLHL GYDH+   +A  M G++  +LED G+ 
Sbjct: 125 YTIVHGFLHLNGYDHIKPDEAKEMFGIQGKVLEDYGLP 162


>gi|62901442|sp|Q74AR8|RRMF_GEOSL RecName: Full=Probable rRNA maturation factor
          Length = 178

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 10/161 (6%)

Query: 4   KKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTD 63
            K    R  L++A+ N      I  R L      + V+  I       ++  ELS+V T 
Sbjct: 20  TKRPEERRPLKVAITNRQKRHPIGTRRL------RKVAETILGALGYPDS--ELSVVITG 71

Query: 64  SHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
              I  +N +Y G D+PTNV+SF          +  +LGD++++ +    EA   G  F 
Sbjct: 72  DLGIRRVNRDYLGKDRPTNVISFAMGEGDFGDLNPDVLGDVIISADTAAREAEEAGIAFW 131

Query: 124 NHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSILEDL 162
           + L  L++HG LH+ GYDH    + +A  ME  ER I   L
Sbjct: 132 SRLCFLLLHGTLHITGYDHERSGEAEARRMEAKEREIFALL 172


>gi|262068037|ref|ZP_06027649.1| putative metalloprotease [Fusobacterium periodonticum ATCC 33693]
 gi|291378259|gb|EFE85777.1| putative metalloprotease [Fusobacterium periodonticum ATCC 33693]
          Length = 162

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 2/156 (1%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           LD    +EN  + + I  +   +      +  ++       E  + LS++ TD+  I+ +
Sbjct: 5   LDFSCELENEKYSEFID-KLYEDSYLENYIKKVLEIEEVESERPLYLSVLLTDNKNIQVI 63

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           N EYR  D PT+V+SF               LGDI+++ E +E +++     F+    ++
Sbjct: 64  NREYRDKDAPTDVISFAYHETDDFNIGPYDTLGDIIISLERVEEQSSEYNHSFKREFYYV 123

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + HG LH+LGYDH+++ D  VM   E +IL   G  
Sbjct: 124 LTHGILHILGYDHIEEDDKKVMREREEAILSSFGYT 159


>gi|157826441|ref|YP_001495505.1| putative metalloprotease [Rickettsia bellii OSU 85-389]
 gi|166229380|sp|A8GUH2|RRMF_RICB8 RecName: Full=Probable rRNA maturation factor
 gi|157801745|gb|ABV78468.1| hypothetical protein A1I_00310 [Rickettsia bellii OSU 85-389]
          Length = 183

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 26/182 (14%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I    + W +    + + + +  K     +S+   F +    ELS++ T++  I 
Sbjct: 1   MINVEIIKNYSKWREH---KQINKALIKKITQKTLSQFDNFSEIKQFELSILLTNNEEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------------------ASSDGCSSLMLGDIVL 106
           TLN ++R I+K TNVLSFP                          +      + LGDI  
Sbjct: 58  TLNKQFRNIEKATNVLSFPANELNWQDLRFSGNEIASSNKPIILENLGDSDYMHLGDIAF 117

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
            Y++I  E+    K FENH +HL+IH  LHL+G+DH +D +  +ME LE  IL   GI+ 
Sbjct: 118 CYDVIYNESYEQQKTFENHFIHLLIHSILHLIGFDHQNDTETKIMENLEIEILAHFGISS 177

Query: 167 PY 168
           PY
Sbjct: 178 PY 179


>gi|218132189|ref|ZP_03460993.1| hypothetical protein BACPEC_00046 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992910|gb|EEC58910.1| hypothetical protein BACPEC_00046 [Bacteroides pectinophilus ATCC
           43243]
          Length = 173

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKG--YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           E  +R + E+   + ++ +I++   Y      VE++++ TD+  I   N EYRG+D PT+
Sbjct: 8   ETDIRIVPEIPEEEIINKVITQACDYEKCPYEVEVNVLLTDNESIHETNREYRGVDAPTD 67

Query: 83  VLSFPTAFAS-----------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           VLSFP                            L+LGDIV++ E +  +A   G   +  
Sbjct: 68  VLSFPMIDYEAPADFAFLEDSPVEDYFDPDTGELLLGDIVISVEKVMEQAEKYGHSVKRE 127

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L  L+ H  LHL GYDH++  +A VME  +  IL ++GI 
Sbjct: 128 LAFLVAHSMLHLFGYDHMEPDEAEVMEDKQNQILLNIGIT 167


>gi|262377255|ref|ZP_06070479.1| metal-dependent hydrolase [Acinetobacter lwoffii SH145]
 gi|262307708|gb|EEY88847.1| metal-dependent hydrolase [Acinetobacter lwoffii SH145]
          Length = 160

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 8/161 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L ++++      E+ L+        K V   +   +   ++  E+ +   D+     L
Sbjct: 1   MKLSLSLQQDFQSPELVLK---RAYIKKVVETTLR--HIGTQSNCEIGIACVDNDESHKL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N EYR  DKPTNVLSFP+           +  +GD+V+   ++  EA+  GK    H  H
Sbjct: 56  NLEYRDKDKPTNVLSFPSELPDEMAQFLDAFPIGDLVICIPVVLREASEQGKAPLTHFTH 115

Query: 129 LIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
           +++HG LHL+GYDH   D+DA  ME +E  IL  LG  +PY
Sbjct: 116 MLVHGTLHLMGYDHETSDEDAEEMESIEIEILAKLGFENPY 156


>gi|83949575|ref|ZP_00958308.1| hypothetical protein ISM_00735 [Roseovarius nubinhibens ISM]
 gi|83837474|gb|EAP76770.1| hypothetical protein ISM_00735 [Roseovarius nubinhibens ISM]
          Length = 166

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 10/131 (7%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSL 99
           +     E+SL+  D  RI  LN E+R   +PTNVLS+P+               +     
Sbjct: 36  LDAEDWEISLLACDDARIAGLNEEFRDKPRPTNVLSWPSEERGAETPGARPDLPEPGFDP 95

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LGDI +++E    EA   GK  E+H+ HLI+H  LHLLGYDH+ D+DA +ME  E  IL
Sbjct: 96  ELGDIAISWETCAAEARAAGKPVEDHVTHLIVHAVLHLLGYDHIRDQDATLMEAEEVVIL 155

Query: 160 EDLGINDPYEV 170
            +LG++DPY V
Sbjct: 156 GNLGLDDPYSV 166


>gi|85057391|ref|YP_456307.1| metal-dependent hydrolase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123518441|sp|Q2NK15|RRMF_AYWBP RecName: Full=Probable rRNA maturation factor
 gi|84789496|gb|ABC65228.1| predicted metal-dependent hydrolase [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 146

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 65/128 (50%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           K   +L+ K +   +    + L+F  + +I+ LN  YR  + PT+VLSF        G  
Sbjct: 14  KPFKSLLIKMFLPIKEKKIMHLIFVTNEKIQELNSFYRQKNYPTDVLSFHNDLTFFAGLE 73

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
              LGD+ +++   + +A       E  +  L +HGFLHL GY H  +++  +M  L+  
Sbjct: 74  DNSLGDVFISFPKAQEQAKTFKHSLEREIAFLAVHGFLHLKGYQHRTEEEFQIMLALQEK 133

Query: 158 ILEDLGIN 165
           IL+ +G+N
Sbjct: 134 ILQKVGLN 141


>gi|304403958|ref|ZP_07385620.1| protein of unknown function UPF0054 [Paenibacillus curdlanolyticus
           YK9]
 gi|304346936|gb|EFM12768.1| protein of unknown function UPF0054 [Paenibacillus curdlanolyticus
           YK9]
          Length = 165

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + LQ+      W +E     + E    +    L   G        ++SL F D   I  L
Sbjct: 1   MSLQL-----DWSNEQDKIEIPEAWITRLEQLLQIAGEQEGLTEGDVSLTFVDDEEIHRL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL--------------MLGDIVLAYEIIEIEAN 116
           N ++R ID+PT+VLSF       D    +              MLGDI+++ E    ++ 
Sbjct: 56  NRDFRHIDRPTDVLSFAMQEDGEDEPEIVFEVESEDEPDPFSGMLGDIIISTERALAQSE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E  +  L +HGFLHL+GYDH D +    M   + ++L+  G+ 
Sbjct: 116 EYGHSLEREIGFLFVHGFLHLIGYDHEDAEGEAEMTAKQEAVLQKAGLP 164


>gi|291567588|dbj|BAI89860.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 186

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 23/182 (12%)

Query: 11  LDLQIAVENALW-------------GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVEL 57
           + L++ +E+  W             G++       E  F + +  L    Y       EL
Sbjct: 1   MQLEVNIEDNFWSGKDGESMTSGGRGEKAIASETWESWFQQWLQQLDP--YLPPAKGYEL 58

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEII 111
           SL  TD   I+  N +YR +D+ T+VLSF          A         LGDI+++ E  
Sbjct: 59  SLRLTDDREIQAFNAQYRQLDQATDVLSFAALETSLVMPAEHLSLHPCYLGDIIISVETA 118

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED--LGINDPYE 169
             +A          L  L  HG LHLLG+DH DD+    M   ++++L+   L I   Y 
Sbjct: 119 FRQAQQARHNLTTELAWLTSHGLLHLLGWDHPDDRSLTRMLEQQKALLQKVNLQIGSGYA 178

Query: 170 VD 171
            D
Sbjct: 179 WD 180


>gi|148657696|ref|YP_001277901.1| hypothetical protein RoseRS_3596 [Roseiflexus sp. RS-1]
 gi|172048089|sp|A5UZ98|RRMF_ROSS1 RecName: Full=Probable rRNA maturation factor
 gi|148569806|gb|ABQ91951.1| protein of unknown function UPF0054 [Roseiflexus sp. RS-1]
          Length = 160

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 15/160 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+Q+    A + D   +    E                     VE+ ++ TD   ++ L
Sbjct: 8   VDIQVVPPYAAYVDSALIEQAVECTLQ----------MEQVAGPVEVGILITDDAGLQRL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           N  YRG+D PT+VLSF  A   S       +   LGDI +++E +  +A   G   E  L
Sbjct: 58  NQAYRGVDAPTDVLSFAEADDDSAFVRPPDAPRYLGDIAISWERVVAQAAEYGHSREREL 117

Query: 127 VHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGIN 165
             L++HG LHLLGYDH     D   M   E  IL  LG++
Sbjct: 118 AFLVVHGMLHLLGYDHERSPADEADMRAREEEILRALGLS 157


>gi|291538974|emb|CBL12085.1| conserved hypothetical protein TIGR00043 [Roseburia intestinalis
           XB6B4]
          Length = 169

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 17/151 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
           +  E   AK V++  +  +       E++L  TD+  I  +N EYR ID PT+VLSFP  
Sbjct: 18  SFDEEALAKEVTDY-AIEHEGFPFEAEINLTLTDNDGIHAINKEYRDIDAPTDVLSFPML 76

Query: 89  ---------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
                              +     +MLGDI+++ + ++ +A   G   +     LI+H 
Sbjct: 77  SYESAGDFSKLEDNYDDNFNPDTGEIMLGDIIISVDKVKEQAKSYGHSEKREYAFLILHS 136

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHL GYDH+  ++A +MEG +  IL ++ I
Sbjct: 137 MLHLFGYDHMTPEEAAIMEGKQTEILNEMNI 167


>gi|164686281|ref|ZP_02210311.1| hypothetical protein CLOBAR_02719 [Clostridium bartlettii DSM
           16795]
 gi|164601883|gb|EDQ95348.1| hypothetical protein CLOBAR_02719 [Clostridium bartlettii DSM
           16795]
          Length = 153

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 3/145 (2%)

Query: 24  DEIHLRTLCEVVFAKAVSNLIS-KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           D      + E +  K    ++    Y   ++  E+SL F D+  I  LN EYRGID+ T+
Sbjct: 7   DRQDKLEVSEELIEKIKDIILECLDYEDYDDNYEVSLSFVDNKEIHELNKEYRGIDRATD 66

Query: 83  VLSFPTAFASSDGCS--SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           VLSFP       G       LGDIV++ E    ++      FE  +  L+ H   HLLGY
Sbjct: 67  VLSFPLLVEDEFGVDFGEESLGDIVISLERAFEQSREYNHSFEREVCFLVCHSMFHLLGY 126

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH  +++   M   E  IL  LGI 
Sbjct: 127 DHDTEENTKEMSQKEEYILNKLGIT 151


>gi|227544913|ref|ZP_03974962.1| metal-dependent hydrolase [Lactobacillus reuteri CF48-3A]
 gi|300910060|ref|ZP_07127520.1| probable metalloprotease [Lactobacillus reuteri SD2112]
 gi|227185125|gb|EEI65196.1| metal-dependent hydrolase [Lactobacillus reuteri CF48-3A]
 gi|300892708|gb|EFK86068.1| probable metalloprotease [Lactobacillus reuteri SD2112]
          Length = 160

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 17/166 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +DL+I  +         L         + +    +K   + EN  E+SL F ++  I+ 
Sbjct: 1   MMDLEIFDQTTAQLPNEQLE------MVRDLLQYAAKELSLSEN-TEMSLTFVNNPEIKK 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCS----------SLMLGDIVLAYEIIEIEANVLG 119
           LN +YR +D+ T+VLSF    A  +              + LGD+ ++ + +  +A  LG
Sbjct: 54  LNAQYRNVDRATDVLSFAAEEAGDETPIIMDPQMAAEIPVNLGDLFISIDKVAEQAKFLG 113

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +  L  L +HGFLHL GYDH +  D   M  L+R IL+  G+ 
Sbjct: 114 HSVDRELGFLAVHGFLHLNGYDHEEPADEEKMFKLQREILDGYGLT 159


>gi|271963824|ref|YP_003338020.1| hypothetical protein Sros_2296 [Streptosporangium roseum DSM 43021]
 gi|270506999|gb|ACZ85277.1| protein of unknown function UPF0054 [Streptosporangium roseum DSM
           43021]
          Length = 160

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 21/163 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  + +L   V  +   N           + ELS++  D   +  L
Sbjct: 1   MSIEVNNESGVEVDEGLIVSLAGHVLERMDIN----------PLAELSILIVDEEAMAVL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----------ASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
           + ++ G   PT+VLSFP                       +LGD+VL  ++   +A   G
Sbjct: 51  HEQWMGEPGPTDVLSFPMDELRPGPGSGARQEGDAPTDPALLGDVVLCPQVAAKQAAEAG 110

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              E  L  L  HG LHLLGYDH + ++   M GL+  +LE  
Sbjct: 111 HSTEAELELLCTHGILHLLGYDHAEPEEHKEMFGLQGELLESW 153


>gi|158421634|ref|YP_001522926.1| hypothetical protein AZC_0010 [Azorhizobium caulinodans ORS 571]
 gi|172048013|sp|A8IG05|RRMF_AZOC5 RecName: Full=Probable rRNA maturation factor
 gi|158328523|dbj|BAF86008.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
          Length = 159

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 5/160 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ + VE+  W        +       A+++L  +         E+S+  TD  RI  L
Sbjct: 1   MEIDVLVEDDGWSALPDAAEIAIAAARAALASLGDEV----PEGAEMSITLTDDARIRVL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+R  DKPTNVLSFP A    +G     LGD+++A E +  EA    K   +HL HL+
Sbjct: 57  NREWRDKDKPTNVLSFPAAEL-PEGVVPQPLGDVIVARETVFSEALAEDKTPAHHLAHLV 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HG LHL+G+DH DD +A  ME  ER IL  LGI+DPY +
Sbjct: 116 VHGTLHLMGFDHEDDDEAEEMEAAERQILAGLGIDDPYAL 155


>gi|296157339|ref|ZP_06840175.1| protein of unknown function UPF0054 [Burkholderia sp. Ch1-1]
 gi|295892675|gb|EFG72457.1| protein of unknown function UPF0054 [Burkholderia sp. Ch1-1]
          Length = 153

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            P+L L +    A  W +   L           V+  I    F      EL++ F D+  
Sbjct: 4   TPKLTLNLQFPAAKAWPEHKALLP------RATVAGWIKAALFAD---GELTVRFVDAEE 54

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
             TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EA   GK    H 
Sbjct: 55  GRTLNRTYRGKDYSTNVLTFAYAESEDDPVT----GDLILCCPVVEKEAAEQGKPLLAHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH  +++A  ME +E  IL  LG  DPY+
Sbjct: 111 AHLLVHGTLHAQGYDHEAEEEAEEMEAIETEILGKLGFPDPYQ 153


>gi|255280944|ref|ZP_05345499.1| putative metalloprotease [Bryantella formatexigens DSM 14469]
 gi|255268392|gb|EET61597.1| putative metalloprotease [Bryantella formatexigens DSM 14469]
          Length = 167

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 18/156 (11%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
             L    E +  K V  ++   Y       E+S+  TD   I T+N E RGID  T+VLS
Sbjct: 11  ADLPFDWEDIAVKVVEAVLD--YTDCPYEAEVSVTLTDDAEIRTINREQRGIDAATDVLS 68

Query: 86  FPT---------AFASSDGCS-------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           FP           F   +           LMLGDIV++ + +  +A   G         L
Sbjct: 69  FPMVSYEIPGNFDFLEEEPADCFHPDSGELMLGDIVISVDHVYAQAEQYGHSLLREYAFL 128

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + H   HL+GYDH+ +++A  ME  +  +LE L I 
Sbjct: 129 LAHSMFHLIGYDHMTEQEAAEMERKQEEVLERLNIT 164


>gi|315651385|ref|ZP_07904410.1| metal-dependent hydrolase [Eubacterium saburreum DSM 3986]
 gi|315486344|gb|EFU76701.1| metal-dependent hydrolase [Eubacterium saburreum DSM 3986]
          Length = 168

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 22/170 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I+ E+     E  L    E +  K V+  +   +       E+S+   D   I  +
Sbjct: 5   MTVEISYES-----EKSLDIPYEDIINKMVAASLD--FENCPYEAEVSVTIVDDEEIRKI 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG---------------CSSLMLGDIVLAYEIIEIEA 115
           N EYRGIDK T+VLSFP     S G                  L+LGDI+L+ E I  +A
Sbjct: 58  NSEYRGIDKSTDVLSFPFNEFESPGNFDDIEESVDAFNPESGELLLGDIILSTEHIIEQA 117

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G      L  L++H  LHL+GYDH+ D+D  +ME  +R IL+  GI+
Sbjct: 118 REYGHSETRELAFLVVHSMLHLMGYDHIADEDRVIMEDRQRKILDLEGIS 167


>gi|325686033|gb|EGD28091.1| metalloprotease [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 174

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   T  +  +   +  L+  +K    K+N  E+S+ F D  R + +N +YR 
Sbjct: 5   DVSYSDEVGFLTKGDRDWEGWIMQLLLMAKKEIGKDNAQEMSINFVDEDRSQAINRDYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D   +  +GD+ +   +IE  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGDDGLDLAMFTQDPDFTEDIGDLFMCPSVIERHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + I+HG+LHL  YDH++  +A  M G++  +LE+ G+ 
Sbjct: 125 YTIVHGYLHLNCYDHIEPDEAKEMFGIQGKVLEEYGLP 162


>gi|51891669|ref|YP_074360.1| hypothetical protein STH531 [Symbiobacterium thermophilum IAM
           14863]
 gi|59799024|sp|Q67S27|RRMF_SYMTH RecName: Full=Probable rRNA maturation factor
 gi|51855358|dbj|BAD39516.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 156

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 4/137 (2%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E +  +     +        + V +S+   D   I  LN ++RG+  PT+VLSF      
Sbjct: 19  EELIRRVAERALELAGAGLGSNVSVSVTLVDDETITDLNRDHRGLASPTDVLSFSQLEGE 78

Query: 93  S----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                     + LGDIV++ E    +A   G  FE  L  L  HG LHL+G+DH   +D 
Sbjct: 79  DMGDLPEGEPMPLGDIVISLERCVSQAAEYGHSFERELGFLTAHGMLHLMGWDHQTPEDE 138

Query: 149 CVMEGLERSILEDLGIN 165
             M      IL  LG++
Sbjct: 139 ARMMAKTEEILAGLGLS 155


>gi|118602172|ref|YP_903387.1| hypothetical protein Rmag_0121 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|145572752|sp|A1AVF9|RRMF_RUTMC RecName: Full=Probable rRNA maturation factor
 gi|118567111|gb|ABL01916.1| protein of unknown function UPF0054 [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 145

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           IH  ++ E   +  +  +I +   +     EL +   +   I+ LN  YR  DK TNVLS
Sbjct: 8   IHDSSINEYDLSNTLQEVIKE---LDRGESELLIRLVNETEIKNLNKVYRHQDKLTNVLS 64

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F +           +LGD+V+  +++  E+    K F NHL H+ IHG LHLLGYDH+D 
Sbjct: 65  FQSDL--PIEIDEAVLGDVVICTQVVLKESIEQHKSFNNHLTHMAIHGMLHLLGYDHIDT 122

Query: 146 KDACVMEGLERSILEDLGINDPY 168
           KDA  ME LE  IL  +GIN+PY
Sbjct: 123 KDAQQMENLEIKILAKIGINNPY 145


>gi|284050359|ref|ZP_06380569.1| putative metalloprotease [Arthrospira platensis str. Paraca]
          Length = 186

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 23/182 (12%)

Query: 11  LDLQIAVENALW-------------GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVEL 57
           + L++ +E+  W             G++       E  F + +  L    Y       EL
Sbjct: 1   MQLEVNIEDNFWSGKDGESMTYGGRGEKAIASETWESWFQQWLQQLDP--YLPPAKGYEL 58

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEII 111
           SL  TD   I+  N +YR +D+ T+VLSF          A         LGDI+++ E  
Sbjct: 59  SLRLTDDREIQAFNAQYRQLDQATDVLSFAALETSLVMPAEHLSLHPCYLGDIIISVETA 118

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED--LGINDPYE 169
             +A          L  L  HG LHLLG+DH DD+    M   ++++L+   L I   Y 
Sbjct: 119 FRQAQQARHNLTTELAWLTSHGLLHLLGWDHPDDRSLTRMLEQQKALLQKVNLQIGSGYA 178

Query: 170 VD 171
            D
Sbjct: 179 WD 180


>gi|114766587|ref|ZP_01445543.1| hypothetical protein 1100011001317_R2601_08751 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541203|gb|EAU44255.1| hypothetical protein R2601_08751 [Roseovarius sp. HTCC2601]
          Length = 160

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 7/126 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-------SDGCSSLMLG 102
           +     E++++  D  RI  LN ++R   KPTNVLS+P+            +      LG
Sbjct: 34  LDPERFEIAVLACDDARIAELNGDFRAKPKPTNVLSWPSEERDPEEPPEGGEDGMPEELG 93

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI +A+E    EA   GK  ++H+ HL++H  LHLLGYDH+ D +A VME LE  IL  +
Sbjct: 94  DIAIAWETCAREAAEQGKPLDHHITHLMVHATLHLLGYDHISDAEATVMETLETEILGKM 153

Query: 163 GINDPY 168
           GI DPY
Sbjct: 154 GIEDPY 159


>gi|332707781|ref|ZP_08427808.1| conserved hypothetical protein TIGR00043 [Lyngbya majuscula 3L]
 gi|332353484|gb|EGJ32997.1| conserved hypothetical protein TIGR00043 [Lyngbya majuscula 3L]
          Length = 175

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 9/142 (6%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F + +  L  +    + N  ELSL  TD+  I+ LN +YR  ++PT+VL+F     
Sbjct: 34  WESWFDQWLVAL--EPDLPEANSYELSLRLTDNSEIQALNSQYRKKNQPTDVLAFAALEV 91

Query: 92  SSDGCSS-------LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           +S   S        L LGDIV++ +    +A   G      L  L  HG LHLLG+DH D
Sbjct: 92  NSPKLSPQKQLSVPLYLGDIVISVDTAVQQAKQHGHSVSTELAWLATHGLLHLLGWDHPD 151

Query: 145 DKDACVMEGLERSILEDLGIND 166
           ++    M   + ++L+ +G+++
Sbjct: 152 EESLLRMLDQQETLLQSVGLSN 173


>gi|108800421|ref|YP_640618.1| putative metalloprotease [Mycobacterium sp. MCS]
 gi|119869550|ref|YP_939502.1| putative metalloprotease [Mycobacterium sp. KMS]
 gi|126436044|ref|YP_001071735.1| putative metalloprotease [Mycobacterium sp. JLS]
 gi|122976747|sp|Q1B6C2|RRMF_MYCSS RecName: Full=Probable rRNA maturation factor
 gi|145558813|sp|A1UIQ4|RRMF_MYCSK RecName: Full=Probable rRNA maturation factor
 gi|166232596|sp|A3Q267|RRMF_MYCSJ RecName: Full=Probable rRNA maturation factor
 gi|108770840|gb|ABG09562.1| protein of unknown function UPF0054 [Mycobacterium sp. MCS]
 gi|119695639|gb|ABL92712.1| protein of unknown function UPF0054 [Mycobacterium sp. KMS]
 gi|126235844|gb|ABN99244.1| protein of unknown function UPF0054 [Mycobacterium sp. JLS]
          Length = 177

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V  K   N             ELS+V  D+  +  L
Sbjct: 1   MSIEVSNESGIDVSEEELISVARFVIEKMNVN----------PAAELSMVLLDTSSMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAAKQAETAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M  L+R +LE+ 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPDEEKEMFALQRELLEEW 148


>gi|315038513|ref|YP_004032081.1| Metalloprotease [Lactobacillus amylovorus GRL 1112]
 gi|312276646|gb|ADQ59286.1| Metalloprotease [Lactobacillus amylovorus GRL 1112]
          Length = 174

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+         +   +  L+  +K    K+N +E+S+ F D      +N +YR 
Sbjct: 5   DITYNDEVGFLDDKRRDWQDWIMKLLLLAKKEIGKDNNLEMSINFVDEDCSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I+  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGEDSIDLAAFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH+   +A  M G++  +LED G+ 
Sbjct: 125 YTVVHGFLHLNGYDHIKPDEAKEMFGIQGKVLEDYGLP 162


>gi|303256204|ref|ZP_07342220.1| putative metalloprotease [Burkholderiales bacterium 1_1_47]
 gi|302860933|gb|EFL84008.1| putative metalloprotease [Burkholderiales bacterium 1_1_47]
          Length = 156

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 9/142 (6%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +L    ++     +   IS+     EN  ++++ F +      LN  YR  D  TNVL+F
Sbjct: 13  NLAHFPQLPSRGKIQRWISRAL---ENDAQITVRFVEEEEGRELNKTYRSKDYATNVLTF 69

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                       ++  D+V+   ++E E+    K  E H+ HL++HG LH  GYDH+DD+
Sbjct: 70  DYQ------IEPVVEADLVICVPVLEKESKDQNKTLEEHMAHLLVHGTLHAQGYDHMDDE 123

Query: 147 DACVMEGLERSILEDLGINDPY 168
           +A VME  E  +L DLG + PY
Sbjct: 124 EAEVMEQRETDVLVDLGFDVPY 145


>gi|39939110|ref|NP_950876.1| hypothetical protein PAM_624 [Onion yellows phytoplasma OY-M]
 gi|59799050|sp|Q6YPV1|RRMF_ONYPE RecName: Full=Probable rRNA maturation factor
 gi|39722219|dbj|BAD04709.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M]
          Length = 146

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 67/126 (53%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
             +L+ K +   +    + L+F  + +I+ LN  YR  + PT+VLSFP       G    
Sbjct: 16  FKSLLIKMFLPIKEKKLMHLIFVTNEKIQELNSFYRQKNYPTDVLSFPNDLTFFAGLEDN 75

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LGD+ +++   +++A       E  +  L +HGFLHL GY H  +++  +M  L+  IL
Sbjct: 76  SLGDVFISFSKAQVQAQTAKHSLEREIAFLAVHGFLHLKGYQHRTEEEFQIMLALQEKIL 135

Query: 160 EDLGIN 165
           +++G+N
Sbjct: 136 QNVGLN 141


>gi|317471788|ref|ZP_07931126.1| hypothetical protein HMPREF1011_01475 [Anaerostipes sp. 3_2_56FAA]
 gi|316900714|gb|EFV22690.1| hypothetical protein HMPREF1011_01475 [Anaerostipes sp. 3_2_56FAA]
          Length = 165

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 17/144 (11%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
           CE++  + V   +   Y       E++L+   +  I  +N E RGID+PT+VLSFP    
Sbjct: 17  CEMIAGQVVEAAVD--YVTCPFECEVNLMLVGNEEIHRINLEQRGIDRPTDVLSFPMIEY 74

Query: 92  SSDGC---------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            + GC                 LMLGDIV++ +  + +A   G   E     LI H  LH
Sbjct: 75  ENPGCFDGLEEDPAAFHPDTGELMLGDIVISLDKAKEQAKAYGHSLEREYAFLIAHSMLH 134

Query: 137 LLGYDHVDDKDACVMEGLERSILE 160
           L GYDH++D++  VME  +  IL+
Sbjct: 135 LFGYDHMEDEERAVMEEKQEEILQ 158


>gi|148251672|ref|YP_001236257.1| hypothetical protein BBta_0048 [Bradyrhizobium sp. BTAi1]
 gi|172047308|sp|A5E857|RRMF_BRASB RecName: Full=Probable rRNA maturation factor
 gi|146403845|gb|ABQ32351.1| hypothetical protein BBta_0048 [Bradyrhizobium sp. BTAi1]
          Length = 169

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 8/160 (5%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++ +    W D+     +       A   + ++         E++++ TD   I TLN  
Sbjct: 10  EVIIAADCWQDQPDAEDVIHRAILAAAERVDAEV-----GDAEIAVMLTDDAGIRTLNSN 64

Query: 74  YRGIDKPTNVLSFPT---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           +RGIDKPTNVLSFP         D  +  MLGDI +AYE +  EA+   K F++HL HL 
Sbjct: 65  WRGIDKPTNVLSFPALQPTGPRGDDDAPRMLGDIAIAYETMRREADEEQKPFDHHLSHLT 124

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +HGFLHL+GYDH  D +A  ME LE  IL  LG+ DPY  
Sbjct: 125 VHGFLHLIGYDHESDAEAEEMEALETEILAHLGVPDPYAD 164


>gi|26007037|sp|O05960|RRMF_RICPR RecName: Full=Probable rRNA maturation factor
 gi|292572382|gb|ADE30297.1| Putative metal-dependent hydrolase [Rickettsia prowazekii Rp22]
          Length = 167

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    R + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 1   MINVEIIRNYNKWREH---RKINKGLIKKITQNVLVRFDNFSKIKQFELSILLTNTAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGC----------SSLMLGDIVLAYEIIEIEANVL 118
           TLN ++R I+K TNVLSFP    +                + LGDI   YE+I  E+   
Sbjct: 58  TLNQQFRSIEKATNVLSFPNNELNWHNLYSKLEFLYYSDYMHLGDIAFCYEVIYNESCEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +H++IH  LHL+G+DH +D DA +ME LE  IL   GI  PY
Sbjct: 118 QKTFENHFIHMLIHSILHLIGFDHQNDTDANIMESLEIEILSYFGIPSPY 167


>gi|239947061|ref|ZP_04698814.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921337|gb|EER21361.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 167

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 11/151 (7%)

Query: 29  RTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
             + + +  K   N++ +   F K   +ELS++ T++  I TLN ++R I+K TNVLSFP
Sbjct: 17  EQINKSLIKKITQNVLLRFDNFSKIKQLELSILLTNTVEILTLNKQFRNIEKATNVLSFP 76

Query: 88  TAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           +                    + LGDI   YE+I  E+    K FENH +HL+IH  LHL
Sbjct: 77  SNELNWQDLYSKLEFLGDSDYMHLGDIAFCYEVIYNESCEQQKTFENHFIHLLIHSVLHL 136

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +G+DH +D +A +ME LE  IL   GI+ PY
Sbjct: 137 IGFDHQNDTEANIMENLEIEILSYFGISSPY 167


>gi|253576079|ref|ZP_04853411.1| cytidine deaminase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844422|gb|EES72438.1| cytidine deaminase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 165

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L L  + E         L  L E V   A       G        E++L F D   I  L
Sbjct: 3   LQLAWSNEQDKMEIGQDLIDLLERVLQIA-------GQAEGITEGEVALTFVDDEAIHEL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS--------------SLMLGDIVLAYEIIEIEAN 116
           N +YRGID+PT+VLSF    +  +                 + MLGDI+++ E  + ++ 
Sbjct: 56  NRDYRGIDRPTDVLSFAMNESLEEEPEIVYELEEDEELDDMTEMLGDIIISVERAKAQSE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             G   E  +  L +HGFLHLLGYDH D      M G + + L ++G+
Sbjct: 116 EYGHSLEREIGFLFVHGFLHLLGYDHQDAVSEAEMMGKQEAALAEVGL 163


>gi|170693392|ref|ZP_02884551.1| protein of unknown function UPF0054 [Burkholderia graminis C4D1M]
 gi|170141547|gb|EDT09716.1| protein of unknown function UPF0054 [Burkholderia graminis C4D1M]
          Length = 153

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/162 (35%), Positives = 76/162 (46%), Gaps = 12/162 (7%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
            P+L L     N  +           V+    V+  I    F      EL++ F D+   
Sbjct: 4   APKLTL-----NLQFPAAKAWPEHKAVLPRATVAGWIKAALFAD---GELTVRFVDAEEG 55

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EA   GK    H  
Sbjct: 56  RTLNRTYRGKDYSTNVLTFAYAESEDDPVT----GDLILCCPVVEKEAAEQGKPLVAHYA 111

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           HL++HG LH  GYDH  +++A  ME LE  IL  LG  DPY 
Sbjct: 112 HLLVHGTLHAQGYDHEVEEEAEEMEALETEILGKLGFPDPYR 153


>gi|282861808|ref|ZP_06270872.1| protein of unknown function UPF0054 [Streptomyces sp. ACTE]
 gi|282563624|gb|EFB69162.1| protein of unknown function UPF0054 [Streptomyces sp. ACTE]
          Length = 165

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAVLDIARYALARMRIHPLS----------ELSVIVVDAAAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAKRQGEEAPTGHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRGERGLTGP 158


>gi|257413987|ref|ZP_04744887.2| putative metalloprotease [Roseburia intestinalis L1-82]
 gi|257201590|gb|EEU99874.1| putative metalloprotease [Roseburia intestinalis L1-82]
          Length = 169

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 17/151 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
           +  E   AK V++  +  +       E++L  TD+  I  +N EYR ID PT+VLSFP  
Sbjct: 18  SFDEEALAKEVTDY-AIEHEGFPFEAEINLTLTDNDGIHAINKEYRDIDAPTDVLSFPML 76

Query: 89  ---------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
                              +     +MLGDI+++ + ++ +A   G   +     LI+H 
Sbjct: 77  SYESAGDFSKLEDDYDDNFNPDTGEIMLGDIIISVDKVKEQAKSYGHSEKREYAFLILHS 136

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHL GYDH+  ++A +MEG +  IL ++ I
Sbjct: 137 MLHLFGYDHMTPEEAAIMEGKQTEILNEMNI 167


>gi|89899547|ref|YP_522018.1| hypothetical protein Rfer_0737 [Rhodoferax ferrireducens T118]
 gi|122479948|sp|Q220R6|RRMF_RHOFD RecName: Full=Probable rRNA maturation factor
 gi|89344284|gb|ABD68487.1| protein of unknown function UPF0054 [Rhodoferax ferrireducens T118]
          Length = 148

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 6/117 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           ++  E+++   D+   + LN +YR  D  TNVL+F            ++  D+VL   ++
Sbjct: 38  QSDAEITVRIVDTEEGQALNRDYRHKDYATNVLTFDYT------QEPVVTADLVLCAPVV 91

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
             EA   GK  + H  HL++HG LH  G+DH  ++DA VME  E  I+  LG  +PY
Sbjct: 92  AQEAKEQGKTLQEHYAHLLVHGALHAQGWDHEAEEDAQVMELRESEIMARLGFENPY 148


>gi|34581258|ref|ZP_00142738.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28262643|gb|EAA26147.1| unknown [Rickettsia sibirica 246]
          Length = 167

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    + + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 1   MINVEIVRNYNKWREH---KQINKSLIKKITQNILLRFDNFSKIKQFELSILLTNAAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           TLN ++R I+K TNVLSFP+                    + LGDI   YE+I  E+   
Sbjct: 58  TLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDYMHLGDIAFCYEVIYNESCEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +HL+IH  LHL+G+DH +D +A +ME LE  IL   GI  PY
Sbjct: 118 HKTFENHFIHLLIHSILHLIGFDHQNDTEANIMEDLEIEILSYFGIFPPY 167


>gi|145590039|ref|YP_001156636.1| hypothetical protein Pnuc_1860 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189039044|sp|A4T008|RRMF_POLSQ RecName: Full=Probable rRNA maturation factor
 gi|145048445|gb|ABP35072.1| protein of unknown function UPF0054 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 155

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 13/155 (8%)

Query: 15  IAVENALWGDEIHLRTLCE-VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           I ++ A    E  L+ +    +  K +                L+L F +S   + LN  
Sbjct: 9   IDIQTASPAIEAALKKIASSALIKKWIKAATPLSGL-------LTLRFVNSTEGKKLNAA 61

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           +R     TNVL+FP   + S   +     DI+    +I  EA   GK  + HL HLI+HG
Sbjct: 62  FRKKHYATNVLTFPYEHSKSALSA-----DIIFCLPVIRKEAKEQGKTVKAHLAHLIVHG 116

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            LH  G+DH  +K+   ME LE ++L+ LG  DPY
Sbjct: 117 CLHAQGFDHEHEKETKKMEKLEVALLKKLGFTDPY 151


>gi|227364880|ref|ZP_03848926.1| metal-dependent hydrolase [Lactobacillus reuteri MM2-3]
 gi|325682495|ref|ZP_08162012.1| putative metalloprotease [Lactobacillus reuteri MM4-1A]
 gi|227070084|gb|EEI08461.1| metal-dependent hydrolase [Lactobacillus reuteri MM2-3]
 gi|324978334|gb|EGC15284.1| putative metalloprotease [Lactobacillus reuteri MM4-1A]
          Length = 160

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 17/166 (10%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +DL+I  +         L         + +    +K   + EN  E+SL F ++  I+ 
Sbjct: 1   MMDLEIFDQTTAQLPNEQLE------MVRDLLQYAAKELSLSEN-TEMSLTFVNNPEIKK 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCS----------SLMLGDIVLAYEIIEIEANVLG 119
           LN +YR +D+ T+VLSF    A  +              + LGD+ ++ + +  +A  LG
Sbjct: 54  LNAQYRNVDRATDVLSFAAEEAGDETPIIMDPEMAAEIPVNLGDLFISIDKVAEQAKFLG 113

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +  L  L +HGFLHL GYDH +  D   M  L+R IL+  G+ 
Sbjct: 114 HSVDRELGFLAVHGFLHLNGYDHEEPADEEKMFKLQREILDGYGLT 159


>gi|297559685|ref|YP_003678659.1| hypothetical protein Ndas_0708 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844133|gb|ADH66153.1| protein of unknown function UPF0054 [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 162

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 15/157 (9%)

Query: 11  LDLQIAVENALW-GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + + +A E+ +   DE  L  L   V      +           + ELS+V  D   +  
Sbjct: 1   MSIDVANESGVTTVDEERLSRLARHVLDAMRVH----------PLAELSVVLVDEEPMAD 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGC----SSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           L+  +     PT+VLSFP       G        +LGD+++  ++ E +A   G   E  
Sbjct: 51  LHVRWMDEPGPTDVLSFPMDELRPGGPGRTSEPGVLGDVIICPQVAERQAEKAGHGTEAE 110

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +  L  HG LHLLGYDH + ++   M GL+  IL   
Sbjct: 111 IDLLCTHGILHLLGYDHAEPEEHKEMFGLQGEILAAW 147


>gi|148543967|ref|YP_001271337.1| hypothetical protein Lreu_0736 [Lactobacillus reuteri DSM 20016]
 gi|184153362|ref|YP_001841703.1| hypothetical protein LAR_0707 [Lactobacillus reuteri JCM 1112]
 gi|194467790|ref|ZP_03073776.1| protein of unknown function UPF0054 [Lactobacillus reuteri 100-23]
 gi|167016785|sp|A5VJH6|RRMF_LACRD RecName: Full=Probable rRNA maturation factor
 gi|229890246|sp|B2G6Z1|RRMF_LACRJ RecName: Full=Probable rRNA maturation factor
 gi|148531001|gb|ABQ83000.1| protein of unknown function UPF0054 [Lactobacillus reuteri DSM
           20016]
 gi|183224706|dbj|BAG25223.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
 gi|194452643|gb|EDX41541.1| protein of unknown function UPF0054 [Lactobacillus reuteri 100-23]
          Length = 159

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 17/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL+I  +         L         + +    +K   + EN  E+SL F ++  I+ L
Sbjct: 1   MDLEIFDQTTAQLPNEQLE------MVRDLLQYAAKELSLSEN-TEMSLTFVNNPEIKKL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS----------SLMLGDIVLAYEIIEIEANVLGK 120
           N +YR +D+ T+VLSF    A  +              + LGD+ ++ + +  +A  LG 
Sbjct: 54  NAQYRNVDRATDVLSFAAEEAGDETPIIMDPEMAAEIPVNLGDLFISIDKVAEQAKFLGH 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             +  L  L +HGFLHL GYDH +  D   M  L+R IL+  G+ 
Sbjct: 114 SVDRELGFLAVHGFLHLNGYDHEEPADEEKMFKLQREILDGYGLT 158


>gi|238916903|ref|YP_002930420.1| hypothetical protein EUBELI_00972 [Eubacterium eligens ATCC 27750]
 gi|259710181|sp|C4Z060|RRMF_EUBE2 RecName: Full=Probable rRNA maturation factor
 gi|238872263|gb|ACR71973.1| Hypothetical protein EUBELI_00972 [Eubacterium eligens ATCC 27750]
          Length = 169

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 22/163 (13%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKG--YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           E       ++ + K +++++++   Y       E+++   DS  I  +N EYR ID PT+
Sbjct: 6   EYEAEEKLDLDYEKIITDVVNEAVDYEKCPYEAEVNVTIVDSESIHEINKEYRNIDSPTD 65

Query: 83  VLSFP--------------------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           VLSFP                         +     L+LGDIVL  + I+ +A+  G   
Sbjct: 66  VLSFPGVNYVTPSDFDAIEDELENNAEDYFNPDTGELLLGDIVLCVQKIKEQADKYGHSE 125

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +  L  L  H  +HL GYDH+  +++ VME  +  +LE LGI 
Sbjct: 126 KRELAFLTAHSMMHLFGYDHMTPEESAVMEAKQNEVLERLGIT 168


>gi|222109709|ref|YP_002551973.1| hypothetical protein Dtpsy_0491 [Acidovorax ebreus TPSY]
 gi|254803969|sp|B9MCH3|RRMF_ACIET RecName: Full=Probable rRNA maturation factor
 gi|221729153|gb|ACM31973.1| protein of unknown function UPF0054 [Acidovorax ebreus TPSY]
          Length = 152

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 20/171 (11%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M++ +++   L LQ A +        H  TL     A+ + + ++          E+++ 
Sbjct: 1   MALNQLS---LSLQFARDAEAT---AHRATLPRHAVARWIRHALAV-------DAEITVR 47

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
              +   + LN E+R  D  TNVL+F            + + D+VL   ++E EA    K
Sbjct: 48  IVGAEEGQRLNREFRHKDYATNVLTFDYQQ------EPVAVADLVLCAPVVEREAREQNK 101

Query: 121 EFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYEV 170
             E H  HL++HG LH  G+DH   ++DA  ME  E +IL++LG  DPY  
Sbjct: 102 TLEEHYAHLLVHGTLHAQGWDHETSEQDAQEMEVYETAILQELGFADPYAA 152


>gi|257865831|ref|ZP_05645484.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257872166|ref|ZP_05651819.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257875459|ref|ZP_05655112.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257799765|gb|EEV28817.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257806330|gb|EEV35152.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257809625|gb|EEV38445.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 158

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 10/131 (7%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------- 97
           + G+       E+S+ F D+  I+ +N EYRG D PT+V+SF     + +  S       
Sbjct: 27  AAGHLELPEDTEMSVTFMDNAAIQEINREYRGKDMPTDVISFAFEEETDEELSIIFDEAL 86

Query: 98  ---SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                 LGDI+++ E  + +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL
Sbjct: 87  EELPRDLGDIMISIERAKEQAAEYGHTYDRELGFLALHGFLHINGYDHMTPEDEKEMFGL 146

Query: 155 ERSILEDLGIN 165
           ++ IL+  G+ 
Sbjct: 147 QKEILDAYGLK 157


>gi|254303748|ref|ZP_04971106.1| possible metal dependent hydrolase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323940|gb|EDK89190.1| possible metal dependent hydrolase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 162

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  ++       +  + LSL+ T++  I+ +N EYR  D PT+V+SF             
Sbjct: 33  IKKVLELEKVESDRPLYLSLLLTNNENIQVINREYRDKDAPTDVISFAYHETEDFNIGPY 92

Query: 100 M-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++ E +E +A+     FE    +++ HG LH+LGYDH+++ D  +M   E +I
Sbjct: 93  DTLGDIIISLERVEEQASEYNHSFEREFYYVLTHGILHILGYDHIEEDDKKLMREREEAI 152

Query: 159 LEDLGIN 165
           L   G  
Sbjct: 153 LSSFGYT 159


>gi|239931373|ref|ZP_04688326.1| putative metalloprotease [Streptomyces ghanaensis ATCC 14672]
 gi|291439743|ref|ZP_06579133.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342638|gb|EFE69594.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 165

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDERAILDIARYALARMRIHPLS----------ELSVIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           D     +LGDIVL  E+   +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCPEVAARQGKEAPTQHTMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAEKGLTGP 158


>gi|163734561|ref|ZP_02142000.1| hypothetical protein RLO149_14078 [Roseobacter litoralis Och 149]
 gi|161392054|gb|EDQ16384.1| hypothetical protein RLO149_14078 [Roseobacter litoralis Och 149]
          Length = 166

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 18/172 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+ + +E+  W   + L  L             S    +     E+S +  D  RI  L
Sbjct: 1   MDIDVLIEDDRW-SALDLDVLVLEALRA-----TSVTLNLDLEAAEVSYLACDDARITLL 54

Query: 71  NFEYRGIDKPTNVLSFPT------------AFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N ++R     TNVLS+P             A  ++D    L LGD+ +AYE    EA  L
Sbjct: 55  NADFREKTTATNVLSWPAVDLAPVIAGAVPAPPTADLTGVLALGDVAIAYETCLREATDL 114

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
            K   +H+ HLI+HG LHLLGYDH+ D DA +M+G+E  IL  +G++DPY V
Sbjct: 115 RKPLADHVTHLIVHGTLHLLGYDHIRDPDATLMQGVEAKILGKMGLDDPYMV 166


>gi|104774146|ref|YP_619126.1| hypothetical protein Ldb1253 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|122397141|sp|Q1G9W4|RRMF_LACDA RecName: Full=Probable rRNA maturation factor
 gi|103423227|emb|CAI98055.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325125926|gb|ADY85256.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 174

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   T  +  +   +  L+  +K    K+N  E+S+ F D  R + +N +YR 
Sbjct: 5   DVSYSDEVGFLTKGDRDWEDWIMQLLLMAKKEIGKDNAQEMSINFVDEDRSQAINRDYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D   +  +GD+ +   +IE  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGDDGLDLSMFTQDPDFTEDIGDLFMCPSVIERHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + I+HG+LHL  YDH++  +A  M G++  +LE+ G+ 
Sbjct: 125 YTIVHGYLHLNCYDHIEPDEAKEMFGIQGKVLEEYGLP 162


>gi|160939164|ref|ZP_02086515.1| hypothetical protein CLOBOL_04058 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438127|gb|EDP15887.1| hypothetical protein CLOBOL_04058 [Clostridium bolteae ATCC
           BAA-613]
          Length = 165

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 18/159 (11%)

Query: 25  EIHLRTLCEVVFAKAVSN--LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           E     + ++ + + + +  L +  Y       E++++ TD+  I+ +N E+R ID PT+
Sbjct: 6   EYEAEKVLDLPYREIIEDTVLAALDYEGCPYEAEVNVILTDNDAIQEINREHRQIDAPTD 65

Query: 83  VLSFPTAFAS----------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           VLSFP                     +     LMLGDIV++ + +E +A   G      L
Sbjct: 66  VLSFPMVDYESPSDFDHVEEAVEDYFNPETGELMLGDIVISVDKVEEQAEKYGHSQTREL 125

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L  H  LHL GYDH++D +  VME  ++ ILE  G  
Sbjct: 126 AFLTAHSMLHLFGYDHMEDGERLVMEEKQKEILETRGYT 164


>gi|329572232|gb|EGG53892.1| translation metalloprotein YbeY [Enterococcus faecalis TX1467]
          Length = 159

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 23/168 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           +D+    E      E            K + NL+  + G+       E+S+ FTD+  I+
Sbjct: 1   MDITFIDETEKVPTEE----------IKEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQ 50

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANV 117
            +N +YRG D PT+V+SF       D                 LGD++++ E    +A  
Sbjct: 51  VINRDYRGKDMPTDVISFALEDEGEDELPIIFDDEELAELPRNLGDLIISTERAAEQAFE 110

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G   E  +  L +HGF HL GYDH++ +D   M GL++ IL+  G+ 
Sbjct: 111 YGHTLEREMGFLAVHGFFHLNGYDHMEPEDEKAMFGLQKEILDAYGLK 158


>gi|116514236|ref|YP_813142.1| metal-dependent hydrolase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123896|ref|YP_004034155.1| metalloprotease [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|122275032|sp|Q04A18|RRMF_LACDB RecName: Full=Probable rRNA maturation factor
 gi|116093551|gb|ABJ58704.1| Predicted metal-dependent hydrolase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|312280459|gb|ADQ61178.1| Putative metalloprotease [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 174

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+   T  +  +   +  L+  +K    K+N  E+S+ F D  R + +N +YR 
Sbjct: 5   DVSYSDEVGFLTKGDRDWEDWIMQLLLMAKKEIGKDNAQEMSINFVDEDRSQAINRDYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D   +  +GD+ +   +IE  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGDDGLDLAMFTQDPDFTEDIGDLFMCPSVIERHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + I+HG+LHL  YDH++  +A  M G++  +LE+ G+ 
Sbjct: 125 YTIVHGYLHLNCYDHIEPDEAKEMFGIQGKVLEEYGLP 162


>gi|294782140|ref|ZP_06747466.1| metalloprotease [Fusobacterium sp. 1_1_41FAA]
 gi|294480781|gb|EFG28556.1| metalloprotease [Fusobacterium sp. 1_1_41FAA]
          Length = 162

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVE----LSLVFTDSH 65
            L L  + E         +  L E  +   + N I K   ++E   E    LS++ TD+ 
Sbjct: 2   ELVLDFSYELDNEKYNEFIDKLYEDAY---LENYIKKVLEIEEVEAERPLYLSVLLTDNK 58

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGKEFEN 124
            I+ +N EYR  D PT+V+SF               LGDI+++ E +E +++     FE 
Sbjct: 59  NIQVINREYRDKDAPTDVISFAYHETDDFNIGPYDTLGDIIISLERVEEQSSEYNHSFER 118

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +++ HG LH+LGYDH++++D  VM   E +IL   G  
Sbjct: 119 EFYYVLTHGILHILGYDHIEEEDKKVMREREEAILSSFGYT 159


>gi|266623022|ref|ZP_06115957.1| putative metalloprotease [Clostridium hathewayi DSM 13479]
 gi|288865224|gb|EFC97522.1| putative metalloprotease [Clostridium hathewayi DSM 13479]
          Length = 165

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 18/161 (11%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            +  E  L+   E +    V+  +   Y       E++++ TD+  I  +N EYR ID  
Sbjct: 6   EYETEEELKLPYEEIITTVVNEALD--YENCPYEAEVNVLLTDNEDIRQINKEYRDIDNA 63

Query: 81  TNVLSFPTAFAS----------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           T+VLSFP A                   +     L+LGDIV++ + ++ +A   G     
Sbjct: 64  TDVLSFPMADYDSPSDFDRLEDMASDYFNPETGELLLGDIVISVDKVKEQAEKYGHSETR 123

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            L  L+ H  LHL GYDH+ D++  VME  +  IL+  G  
Sbjct: 124 ELAFLVAHSMLHLCGYDHMVDEERLVMEKKQEEILKRGGYE 164


>gi|256832769|ref|YP_003161496.1| hypothetical protein Jden_1545 [Jonesia denitrificans DSM 20603]
 gi|256686300|gb|ACV09193.1| protein of unknown function UPF0054 [Jonesia denitrificans DSM
           20603]
          Length = 151

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     DE     L   VF                 + ELS+VF D   I  L
Sbjct: 1   MSIEVNNETTHQLDEAEFAELARYVFDAM----------HIHPLTELSVVFVDPDTISEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++  I  PT+VLSFP        +       +LGDIV+  E+   +A   G      +
Sbjct: 51  HEQWMDIPGPTDVLSFPMDELRPGTTERPTEQGILGDIVICPEVAVDQAAQAGHSPIEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLGYDH + ++   M  L+R +L
Sbjct: 111 LLLATHGILHLLGYDHAEPEEEREMFSLQRHLL 143


>gi|329934652|ref|ZP_08284693.1| metal-dependent hydrolase [Streptomyces griseoaurantiacus M045]
 gi|329305474|gb|EGG49330.1| metal-dependent hydrolase [Streptomyces griseoaurantiacus M045]
          Length = 165

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARHALARMRIHPLS----------ELSVIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVL--GKEFE 123
           + ++  +  PT+V+SFP           D     +LGDIVL  E+   +          +
Sbjct: 51  HRQWMDLPGPTDVMSFPMDELRPPGKDDDEPPQGLLGDIVLCPEVAAKQGAEAATRHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  L +HG LHLLGYDH +  +   M GL+ +I++  
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGW 149


>gi|284047990|ref|YP_003398329.1| protein of unknown function UPF0054 [Acidaminococcus fermentans DSM
           20731]
 gi|283952211|gb|ADB47014.1| protein of unknown function UPF0054 [Acidaminococcus fermentans DSM
           20731]
          Length = 160

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           EI +    E    KA+  +  K      +  E+ +   ++  I TLN +YRGID+PT+VL
Sbjct: 11  EIAIPEELEETLKKAMDIVARKENLT--DNTEVDITIVNNEEIHTLNRDYRGIDRPTDVL 68

Query: 85  SFPTAFASS-----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           SF            DG +  +LGD++++      +    G      + +L +HG LHLLG
Sbjct: 69  SFALDEGDEEPEVEDGEAEHLLGDVIISAPRAVEQGEEFGHGLTREMTYLAVHGMLHLLG 128

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YDH+++ D  VM   E  IL +L + 
Sbjct: 129 YDHMEEADKRVMRAREEEILRELDLA 154


>gi|170078371|ref|YP_001735009.1| hypothetical protein SYNPCC7002_A1764 [Synechococcus sp. PCC 7002]
 gi|238692816|sp|B1XPN9|RRMF_SYNP2 RecName: Full=Probable rRNA maturation factor
 gi|169886040|gb|ACA99753.1| conserved hypothetical protein (TIGR00043) [Synechococcus sp. PCC
           7002]
          Length = 163

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 9/162 (5%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK--GYFVKENIVELSLVFTDSHR 66
           P L+ +I VENA     + L  L    +   +   + +        +  EL+L FT    
Sbjct: 3   PVLECEIFVENA---SGLELPELAIAPWENHLQRWLPELTAALPPADGYELTLRFTTDAE 59

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           I  LN +YR  D+PT+VLSF                L LGDI+++ E  + +A       
Sbjct: 60  IHNLNHQYRHKDQPTDVLSFAALEDNFASPLPPGEPLYLGDIIVSVETAQRQAQERQHSL 119

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +  L  L+ HG LHLLG+DH D+     M   +  +L ++ +
Sbjct: 120 QTELGWLVSHGLLHLLGWDHPDEARLIEMLDRQAVLLRNVQL 161


>gi|161507652|ref|YP_001577606.1| hypothetical protein lhv_1302 [Lactobacillus helveticus DPC 4571]
 gi|172048292|sp|A8YVM8|RRMF_LACH4 RecName: Full=Probable rRNA maturation factor
 gi|160348641|gb|ABX27315.1| hypothetical protein lhv_1302 [Lactobacillus helveticus DPC 4571]
          Length = 174

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+         +   +  L+  +K    K+N +E+S+ F D  R   +N +YR 
Sbjct: 5   DVTYHDEVGFLDDKNRNWQDWIMKLLLLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I+  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGEDAIDLSVFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH+   +A  M G++  +LE+ G+ 
Sbjct: 125 YTVVHGFLHLNGYDHIKPDEAKEMFGIQGKVLEECGLP 162


>gi|26553790|ref|NP_757724.1| hypothetical protein MYPE3350 [Mycoplasma penetrans HF-2]
 gi|29428203|sp|Q8EW68|RRMF_MYCPE RecName: Full=Probable rRNA maturation factor
 gi|26453797|dbj|BAC44128.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
          Length = 150

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 5/142 (3%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDSHRIETLNFEYRGIDKPTN 82
           DE    +  ++   K VS  I     +K  I+ EL ++  D++  + +N +YR  D PT+
Sbjct: 8   DEKKFLSKKDISLIKKVSKFIFIEEKLKNKIIFELHII--DNNESQKINKQYRNKDYPTD 65

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           V+SF  +F       + +LG+I L+YE +  +A      FE  L  L+ HG  HLLGYDH
Sbjct: 66  VISF--SFWEEGLLKTALLGEIYLSYEKVVSQAEEFKHSFERELGFLVSHGIYHLLGYDH 123

Query: 143 VDDKDACVMEGLERSILEDLGI 164
            ++ +A +M G +  +L+  G+
Sbjct: 124 EEEDEAKIMFGKQYQVLKLCGL 145


>gi|291536163|emb|CBL09275.1| conserved hypothetical protein TIGR00043 [Roseburia intestinalis
           M50/1]
          Length = 165

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 17/151 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
           +  E   AK V++  +  +       E++L  TD+  I  +N EYR ID PT+VLSFP  
Sbjct: 14  SFDEEALAKEVTDY-AIEHEGFPFEAEINLTLTDNDGIHAINKEYRDIDAPTDVLSFPML 72

Query: 89  ---------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
                              +     +MLGDI+++ + ++ +A   G   +     LI+H 
Sbjct: 73  SYESAGDFSKLEDDYDDNFNPDTGEIMLGDIIISVDKVKEQAKSYGHSEKREYAFLILHS 132

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHL GYDH+  ++A +MEG +  IL ++ I
Sbjct: 133 MLHLFGYDHMTPEEAAIMEGKQTEILNEMNI 163


>gi|51473908|ref|YP_067665.1| putative metalloprotease [Rickettsia typhi str. Wilmington]
 gi|59799025|sp|Q68W09|RRMF_RICTY RecName: Full=Probable rRNA maturation factor
 gi|51460220|gb|AAU04183.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
          Length = 167

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    R + + +  K   N++ +  +F K    ELS++ T++  I 
Sbjct: 1   MINVEIVRNYNKWREH---RKINKGLIKKITQNVLVRFDHFDKIKQFELSILLTNTAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGC----------SSLMLGDIVLAYEIIEIEANVL 118
           TLN ++R I+K TNVLSFP    +                + LGDI   YE+I  E+   
Sbjct: 58  TLNQQFRSIEKATNVLSFPNNELNWHNLYSKLEFLYYSDYMHLGDIAFCYEVIYNESCEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +H++IH  LHL+G+DH +D DA +ME LE  IL   GI  PY
Sbjct: 118 QKTFENHFIHMLIHSILHLIGFDHQNDTDANIMESLEIEILSYFGIPSPY 167


>gi|295677635|ref|YP_003606159.1| protein of unknown function UPF0054 [Burkholderia sp. CCGE1002]
 gi|295437478|gb|ADG16648.1| protein of unknown function UPF0054 [Burkholderia sp. CCGE1002]
          Length = 153

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            P+L L +    A  W +   L           V+  I    F      EL++ F D+  
Sbjct: 4   TPKLTLSLQFPAAKAWPEHKALLP------RTTVAGWIKAALFAD---GELTVRFVDAEE 54

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
             TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EA   GK    H 
Sbjct: 55  GRTLNRTYRGKDYATNVLTFAYAESEDDPVT----GDLILCCPVVEKEAAEQGKPLAAHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH  +++A  ME +E  IL  LG  DPY+
Sbjct: 111 AHLLVHGTLHAQGYDHEVEEEAEEMEAIETEILARLGFPDPYQ 153


>gi|323466382|gb|ADX70069.1| Hypothetical cytosolic protein [Lactobacillus helveticus H10]
          Length = 174

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+         +   +  L+  +K    K+N +E+S+ F D  R   +N +YR 
Sbjct: 5   DVTYHDEVGFLDGKNRDWQDWIMKLLLLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I+  +   G  F+    
Sbjct: 65  KDRPTDVISFAIEDGEDAIDLSAFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH+   +A  M G++  +LE+ G+ 
Sbjct: 125 YTVVHGFLHLNGYDHIKPDEAKEMFGIQGKVLEECGLP 162


>gi|259503179|ref|ZP_05746081.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259168836|gb|EEW53331.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 159

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 17/164 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL I  E A    E  L         + V    +    +K N  E+S+    +  I  L
Sbjct: 1   MDLTIYDETAGRVSEGQL------ALIRDVLQFAAGKLSLKAN-TEMSVTLMTNPAIRKL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS----------SLMLGDIVLAYEIIEIEANVLGK 120
           N +YRG+D+ T+VLSF       +                LGD+ ++ + +  +A  LG 
Sbjct: 54  NQQYRGVDRATDVLSFAAEERGDETPIIMAPELAAEIPENLGDLFVSVDKVAEQAKFLGH 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +  L  L++HGFLHL GYDH +  D   M  L+R IL + G+
Sbjct: 114 SADRELGFLVVHGFLHLNGYDHEEPADEQRMFDLQREILNEYGL 157


>gi|291530789|emb|CBK96374.1| conserved hypothetical protein TIGR00043 [Eubacterium siraeum 70/3]
 gi|291557706|emb|CBL34823.1| conserved hypothetical protein TIGR00043 [Eubacterium siraeum
           V10Sc8a]
          Length = 169

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 7/145 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           I +      V  K ++  +    FV +   ++S+   D+ RI+ +N E+R  +K T+V+S
Sbjct: 25  IEVPNGLRTVIRKCIAETLRVTDFVGD--ADVSVTLVDNERIKRINKEFRDKNKVTDVIS 82

Query: 86  FPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP      +  +    + MLGDIV++ E    +A   G      +  L  H  LHLLGYD
Sbjct: 83  FPLGAYDEYDVNPENGAYMLGDIVISMEKAHAQAIEYGHSLIREVGFLATHSTLHLLGYD 142

Query: 142 HVDDKD-ACVMEGLERSILEDLGIN 165
           H DD D   VM  L+  +L +L I 
Sbjct: 143 HEDDPDGEKVMLELQDLVLNNLKIT 167


>gi|124268424|ref|YP_001022428.1| hypothetical protein Mpe_A3240 [Methylibium petroleiphilum PM1]
 gi|171769843|sp|A2SKV4|RRMF_METPP RecName: Full=Probable rRNA maturation factor
 gi|124261199|gb|ABM96193.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 149

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 20/169 (11%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M      + +L LQ A       D  H   L      + +   +           E+++ 
Sbjct: 1   MKRPARPVLKLSLQFA-------DASHRAQLPRHKVLRWIRAALDV-------PAEITVR 46

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
              +     LN +YR  D  TNVL+F            +++ D++L   ++E EA   G+
Sbjct: 47  IVGTDEGRALNRDYRQKDYATNVLTFDYE------AEPVVVADLILCAPVVEREARDEGR 100

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             E H  HL++HG LH  G+DH  + +A  ME  E  +L  LG  DPY 
Sbjct: 101 SLEAHYAHLLVHGTLHAQGHDHEIEAEAQAMEARETEVLRALGYADPYA 149


>gi|153853176|ref|ZP_01994585.1| hypothetical protein DORLON_00570 [Dorea longicatena DSM 13814]
 gi|149753962|gb|EDM63893.1| hypothetical protein DORLON_00570 [Dorea longicatena DSM 13814]
          Length = 164

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 17/155 (10%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           ++ L   CE +  + V   +   Y       E++L+ T++ +I  +N E+RGID+ T+VL
Sbjct: 10  DVKLPLECEALAKRVVEEALD--YVGCPYEAEVNLLLTENAQIHEMNKEFRGIDRATDVL 67

Query: 85  SFPTAFASSDGCSSLM---------------LGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           SFP       G    +               LGDIV++ E +  +A   G         L
Sbjct: 68  SFPMIDYPEPGTFDFLEEQEDCFDPESGELTLGDIVISKEKVLAQAEEYGHSPMREYAFL 127

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           I H  LHL GYDH++D++  VME  +R I+E L I
Sbjct: 128 IAHSVLHLTGYDHMEDEERQVMEQKQREIMERLDI 162


>gi|296112099|ref|YP_003622481.1| hypothetical protein LKI_09865 [Leuconostoc kimchii IMSNU 11154]
 gi|295833631|gb|ADG41512.1| hypothetical protein LKI_09865 [Leuconostoc kimchii IMSNU 11154]
          Length = 160

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 18/166 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL I  + +    + H           A+ N  S  +    +  E+S+ F ++  I+  
Sbjct: 1   MDLAIIDQTSKGVSQYH------QDLVNAILNF-SGTFLKLPDNTEMSVTFVNNDEIQQY 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL----------MLGDIVLAYEIIEIEANVLGK 120
           N +YRG+DKPT+V+SF       D                +GDI+++ ++I  +A  LG 
Sbjct: 54  NRQYRGVDKPTDVISFAIEEGEDDFDILPDQEWANDIAKNIGDILVSVDVIASQATYLGH 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGIN 165
            +E  L  L++HGFLHL GYDH+  D +   M  L+R IL+D G+ 
Sbjct: 114 SYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFDLQRKILDDYGLK 159


>gi|260101322|ref|ZP_05751559.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260084907|gb|EEW69027.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
          Length = 174

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+         +   +  L+  +K    K+N +E+S+ F D  R   +N +YR 
Sbjct: 5   DVTYHDEVGFLDDKNRDWRDWIMKLLLLAKKEIGKDNNLEMSINFVDEDRSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I+  +   G  F+    
Sbjct: 65  KDRPTDVISFAIQDGEDAIDLSAFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH+   +A  M G++  +LE+ G+ 
Sbjct: 125 YTVVHGFLHLNGYDHIKPDEAKEMFGIQGKVLEECGLP 162


>gi|29832127|ref|NP_826761.1| putative metalloprotease [Streptomyces avermitilis MA-4680]
 gi|46577428|sp|Q82BX0|RRMF_STRAW RecName: Full=Probable rRNA maturation factor
 gi|29609245|dbj|BAC73296.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 165

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           D     +LGDIVL  E+ E +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPMKDDDEPPQGLLGDIVLCPEVAERQGKEAPTQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLAVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAEKGLTGP 158


>gi|225378120|ref|ZP_03755341.1| hypothetical protein ROSEINA2194_03780 [Roseburia inulinivorans DSM
           16841]
 gi|225210121|gb|EEG92475.1| hypothetical protein ROSEINA2194_03780 [Roseburia inulinivorans DSM
           16841]
          Length = 165

 Score =  147 bits (372), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 18/150 (12%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--- 88
            E +  + ++  +    F  E   E++L   D+  I  +N E+R ID+PT+VLSFP    
Sbjct: 17  VEALAGEVINFTLEHEDFPYEP--EVNLTLVDNEGIHAINKEFREIDRPTDVLSFPMLSY 74

Query: 89  -------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
                            +     +MLGDIV++ + +  +A   G   +     LI+H  L
Sbjct: 75  ENAGDFSKLEDDYDDNFNPDTGEIMLGDIVISVDKVLEQAESYGHTTKREYAFLIVHSML 134

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HL GYDH+  ++A VME  ++ IL+++ I 
Sbjct: 135 HLFGYDHMTPEEAAVMEAKQKQILDEMNIT 164


>gi|126727645|ref|ZP_01743477.1| hypothetical protein RB2150_15740 [Rhodobacterales bacterium
           HTCC2150]
 gi|126703061|gb|EBA02162.1| hypothetical protein RB2150_15740 [Rhodobacterales bacterium
           HTCC2150]
          Length = 188

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 18/166 (10%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E+  W           +  +  +++L      ++ +   +S++  D  +I TLN ++RG
Sbjct: 17  IEDDRWR-AADFDDHARIAASATLTHL-----GLRVDDYLISVLACDDAKIATLNADFRG 70

Query: 77  IDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
              PTNVLS+P+                        LGDI ++++    EA V    FE 
Sbjct: 71  KPTPTNVLSWPSEERGVEVAGDTPELPDIGQEIPYELGDIAISFDTCLQEAKVSNTPFEQ 130

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           H++HL+IHG LHLLGYDH+ DKDA +MEG+E  +L  LG+ DPY  
Sbjct: 131 HVLHLMIHGTLHLLGYDHIFDKDAALMEGIETEVLATLGVPDPYAA 176


>gi|167749631|ref|ZP_02421758.1| hypothetical protein EUBSIR_00589 [Eubacterium siraeum DSM 15702]
 gi|167657384|gb|EDS01514.1| hypothetical protein EUBSIR_00589 [Eubacterium siraeum DSM 15702]
          Length = 169

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 7/145 (4%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           I +      V  K ++  +    FV +   ++S+   D+ RI+ +N E+R  +K T+V+S
Sbjct: 25  IEVPNGLRTVIRKCIAETLRVTDFVGD--ADVSVTLVDNERIKRINKEFRDKNKVTDVIS 82

Query: 86  FPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           FP      +  +    + MLGDIV++ E    +A   G      +  L  H  LHLLGYD
Sbjct: 83  FPLGAYDEYDVNPENGAYMLGDIVISMEKAHAQAIEYGHSLVREVGFLATHSTLHLLGYD 142

Query: 142 HVDDKD-ACVMEGLERSILEDLGIN 165
           H DD D   VM  L+  +L +L I 
Sbjct: 143 HEDDPDGEKVMLELQDLVLNNLKIT 167


>gi|134098070|ref|YP_001103731.1| putative metalloprotease [Saccharopolyspora erythraea NRRL 2338]
 gi|291007471|ref|ZP_06565444.1| putative metalloprotease [Saccharopolyspora erythraea NRRL 2338]
 gi|166231386|sp|A4F9T1|RRMF_SACEN RecName: Full=Probable rRNA maturation factor
 gi|133910693|emb|CAM00806.1| protein of unknown function UPF0054 [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 183

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +   E  + ++      K               + ELS+V  +   +  L
Sbjct: 1   MSIEIANESGVEVPEPSIVSVARFALDKM----------SVSQLAELSIVLVELDVMSDL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V++FP           S G    +LGDIVL     + +A   G    +
Sbjct: 51  HERWMDLPGPTDVMAFPMDEYDSSRRPDSAGAGPALLGDIVLCPAFAKDQARKAGHSLLD 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH + ++   M GL+  IL D 
Sbjct: 111 ELHLLTVHGVLHLLGYDHAEPEEEREMFGLQNQILADF 148


>gi|283769579|ref|ZP_06342475.1| metalloprotein, YbeY/ UPF0054 family [Bulleidia extructa W1219]
 gi|283103847|gb|EFC05233.1| metalloprotein, YbeY/ UPF0054 family [Bulleidia extructa W1219]
          Length = 147

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDI 104
           ++     +   E+S+ F  S  I  +N +YRGID+PT+V+SF       +   +  LGD+
Sbjct: 27  AEAVLQLDEKKEISVTFVRSRTIHRINRDYRGIDRPTDVISFAIQDG-GEEIETHDLGDL 85

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +  +    +A   G   +     L  HG LH LGYDH + K+   M  L+  +LE  GI
Sbjct: 86  FINVDYAVRQAKEYGHSEKREFCFLFAHGLLHCLGYDHRNPKEEKKMIALQNQLLE--GI 143

Query: 165 ND 166
            D
Sbjct: 144 AD 145


>gi|167746974|ref|ZP_02419101.1| hypothetical protein ANACAC_01686 [Anaerostipes caccae DSM 14662]
 gi|167653934|gb|EDR98063.1| hypothetical protein ANACAC_01686 [Anaerostipes caccae DSM 14662]
          Length = 165

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 17/144 (11%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
           CE++  + V   +   Y       E++L+   ++ I  +N E RGID+PT+VLSFP    
Sbjct: 17  CEMIAGQVVEAAVD--YVTCPFECEVNLMLVGNNEIHRINLEQRGIDRPTDVLSFPMVEY 74

Query: 92  SSDGC---------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
              GC                 LMLGDIV++ +  + +A   G   E     LI H  LH
Sbjct: 75  EKPGCFDGLEEDPAAFHPDSGELMLGDIVISMDKAKEQAEAYGHSLEREYAFLIAHSMLH 134

Query: 137 LLGYDHVDDKDACVMEGLERSILE 160
           L GYDH++D++  VME  +  IL+
Sbjct: 135 LFGYDHMEDEERAVMEEKQEEILQ 158


>gi|297199578|ref|ZP_06916975.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197713494|gb|EDY57528.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 165

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDTDAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVL--GKEFE 123
           + ++  +  PT+V+SFP           D     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCPEVAKRQGEEAETQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRQEKGLTGP 158


>gi|302551323|ref|ZP_07303665.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302468941|gb|EFL32034.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 165

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVL--GKEFE 123
           + ++  +  PT+V+SFP           D     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCPEVAQKQGQEAETQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAERGLTGP 158


>gi|227529164|ref|ZP_03959213.1| metal-dependent hydrolase [Lactobacillus vaginalis ATCC 49540]
 gi|227350889|gb|EEJ41180.1| metal-dependent hydrolase [Lactobacillus vaginalis ATCC 49540]
          Length = 159

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC----------SSLML 101
            +  E+S+   ++  I  LN  YR +D+ T+VLSF    + ++              + L
Sbjct: 35  ADDTEMSVTLVNNPEIRELNSRYRHVDRATDVLSFAAEESGNETPIILAPELAAELPVNL 94

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GD+ ++ + +  +A  LG  F+  L  L++HGFLHL GYDH   +D   M  L+R IL+ 
Sbjct: 95  GDLFISIDKVAEQAKFLGHSFDRELGFLVVHGFLHLNGYDHEQPEDEKKMFTLQREILDQ 154

Query: 162 LGIN 165
            G+ 
Sbjct: 155 YGLK 158


>gi|307730934|ref|YP_003908158.1| hypothetical protein BC1003_2914 [Burkholderia sp. CCGE1003]
 gi|307585469|gb|ADN58867.1| protein of unknown function UPF0054 [Burkholderia sp. CCGE1003]
          Length = 153

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/163 (35%), Positives = 77/163 (47%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            P+L L +    A  W +   L           V+  I    F      EL++ F D+  
Sbjct: 4   APKLTLNLQFPAAKAWPEHKALLP------RATVAGWIKAALFAD---GELTVRFVDAEE 54

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
             TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EA   GK    H 
Sbjct: 55  GRTLNRTYRGKDYSTNVLTFAYAESEDDPVT----GDLILCCPVVEKEAAEQGKPLVAHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH  +++A  ME LE  IL  LG  DPY 
Sbjct: 111 AHLLVHGTLHAQGYDHEAEEEAEEMEALETEILGKLGFADPYR 153


>gi|295838976|ref|ZP_06825909.1| metalloprotease [Streptomyces sp. SPB74]
 gi|197695531|gb|EDY42464.1| metalloprotease [Streptomyces sp. SPB74]
          Length = 165

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +      +   + +S          ELS++  D   +E L
Sbjct: 1   MSIDVNNESGTEADEEAILDIARYALGRMRIHPLS----------ELSVILVDGPAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ E +          +
Sbjct: 51  HVQWMDLPGPTDVMSFPMDELRPPVKDDEQPPQGLLGDIVLCPEVAERQGREAPTEHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+++I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQQAIVDGWRGERGLTGP 158


>gi|114778655|ref|ZP_01453471.1| Predicted metal-dependent hydrolase [Mariprofundus ferrooxydans
           PV-1]
 gi|114551120|gb|EAU53681.1| Predicted metal-dependent hydrolase [Mariprofundus ferrooxydans
           PV-1]
          Length = 159

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 7/161 (4%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +    L I V++ L  D      +     A AV    S   F  E +  L + F     +
Sbjct: 1   MSESRLDIIVDDELAEDFTPPENI-----AAAVQAACSVAGFQNEPM--LCIRFAGDAEV 53

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN ++RG+D  T+VLSFP    S     +  LGDI LA   ++ EA  LG    +H++
Sbjct: 54  RELNSQWRGLDCVTDVLSFPMQDDSDAIDPNQSLGDIALALPFVQQEAGRLGLPQADHIL 113

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           HLI+H  LHLL YDH+DD++A  M+ LER  ++ LG++DPY
Sbjct: 114 HLIVHATLHLLDYDHIDDEEAAQMQQLERQAMQQLGLHDPY 154


>gi|317122974|ref|YP_004102977.1| hypothetical protein Tmar_2170 [Thermaerobacter marianensis DSM
           12885]
 gi|315592954|gb|ADU52250.1| protein of unknown function UPF0054 [Thermaerobacter marianensis
           DSM 12885]
          Length = 173

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 15/149 (10%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +AV+N    D + +      +    V  L++         VE+SL F D   I  LN  Y
Sbjct: 14  VAVDNRQ--DRVAVPDHWPSLLPAVVERLLAAEGLAVP--VEVSLTFVDDAAIHELNRRY 69

Query: 75  RGIDKPTNVLSFPTAFASSD-----------GCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           RG D PT+VLSFP                  G   L LGD+V++ E    +A   G   +
Sbjct: 70  RGKDAPTDVLSFPQLEQEEIAALRDPVPAVLGPDLLPLGDVVISLERAAAQAREYGHSLD 129

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVME 152
             + +L+ HG LHLLGYDH D +   +M 
Sbjct: 130 REVGYLLAHGVLHLLGYDHPDAEGERLMH 158


>gi|91785152|ref|YP_560358.1| hypothetical protein Bxe_A0628 [Burkholderia xenovorans LB400]
 gi|123168087|sp|Q13UD3|RRMF_BURXL RecName: Full=Probable rRNA maturation factor
 gi|91689106|gb|ABE32306.1| Protein of unknown function UPF0054 [Burkholderia xenovorans LB400]
          Length = 153

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/163 (35%), Positives = 79/163 (48%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            P+L L +    A  W +   L          AV+  I    F      EL++ F D+  
Sbjct: 4   TPKLTLNLQFPAAKAWPEHKALLP------RAAVAGWIKAALFAD---GELTVRFVDAEE 54

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
             TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EA   GK    H 
Sbjct: 55  GRTLNRTYRGKDYSTNVLTFAYAESEDDPVT----GDLILCCPVVEKEAAEQGKPLVAHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH  +++A  ME +E  IL  LG  DPY+
Sbjct: 111 AHLLVHGTLHAQGYDHEVEEEAEEMEAIETEILGKLGFPDPYQ 153


>gi|256375388|ref|YP_003099048.1| metalloprotease [Actinosynnema mirum DSM 43827]
 gi|255919691|gb|ACU35202.1| protein of unknown function UPF0054 [Actinosynnema mirum DSM 43827]
          Length = 187

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+    DE  +         +               + ELS++  +   +  L
Sbjct: 1   MSIEIANESGAQVDEASIVAAARFALDRM----------GVSPLAELSVLLVELDVMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V++FP           + G    +LGDIVL     E +A   G    +
Sbjct: 51  HQRWMDLPGPTDVMAFPMDELDSARRPDAAGLGPALLGDIVLCPAFAEDQAAKAGHSLMD 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M  L+  IL D 
Sbjct: 111 ELHLLTVHGVLHLLGYDHAEPAEEREMFTLQNRILGDY 148


>gi|157828976|ref|YP_001495218.1| putative metalloprotease [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166228797|sp|A8GTI5|RRMF_RICRS RecName: Full=Probable rRNA maturation factor
 gi|157801457|gb|ABV76710.1| hypothetical protein A1G_06285 [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 167

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    + + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 1   MINVEIVRHYNKWREH---KQINKSLIKKITQNILLRFDNFSKIKQFELSILLTNAAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
            LN ++R I+K TNVLSFP+                    + LGDI   YE+I  E+   
Sbjct: 58  ILNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDYMHLGDIAFCYEVIYNESCEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +HL+IH  LHL+G+DH +D +A +ME LE  IL   GI  PY
Sbjct: 118 YKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEILSYFGIFPPY 167


>gi|331091150|ref|ZP_08339992.1| hypothetical protein HMPREF9477_00635 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405372|gb|EGG84908.1| hypothetical protein HMPREF9477_00635 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 164

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 17/156 (10%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E+ L   CE +    V  ++   Y       E++L+ T +  I+ +N E+R ID+ T+VL
Sbjct: 10  ELKLDLECETLAETVVEGVLD--YEKCPYEAEVNLLLTMNKEIQEMNAEFRHIDRATDVL 67

Query: 85  SFPT---------AFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           SFP          AF   D          LMLGDIV++ E +  +A   G   +     L
Sbjct: 68  SFPMIDYEKAGEFAFLEEDDSYFNCDTGELMLGDIVISKEKVIAQAEEYGHTIKREYAFL 127

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           I H  LHLLGYDH+++++   ME  ++ ILE LGI 
Sbjct: 128 IAHSMLHLLGYDHMEEQERLEMERKQKEILEQLGIT 163


>gi|294341620|emb|CAZ90037.1| putative metal-dependent hydrolase [Thiomonas sp. 3As]
          Length = 175

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 15/168 (8%)

Query: 9   PRLDLQIAVENALWGDEIH---LRTLCEVVFA---KAVSNLISKGYFVKENIVELSLVFT 62
           P L L +   +    D++    L            +++  L   G   + +  +++L F 
Sbjct: 10  PALRLSVQFADTTHRDQLPRALLLRWVRAALRVGPESLDALPQAGALSEAH--QITLRFV 67

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
            +     LN  YRG D PTNVL+F       D     +  DIVL   ++  EA    K  
Sbjct: 68  AADEGRALNRAYRGKDYPTNVLTF-------DYNHWPVQADIVLCCPVVAGEALAQHKPL 120

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
             H  HL+IHG LH  G+DH  +++A  ME  E ++L+  GI+DPY  
Sbjct: 121 GAHYAHLVIHGLLHAQGWDHQTEREAQKMERQEVTVLQRFGISDPYAD 168


>gi|323527297|ref|YP_004229450.1| hypothetical protein BC1001_2976 [Burkholderia sp. CCGE1001]
 gi|323384299|gb|ADX56390.1| protein of unknown function UPF0054 [Burkholderia sp. CCGE1001]
          Length = 153

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/163 (35%), Positives = 76/163 (46%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            P+L L +    A  W +   L           V   I    F      EL++ F D+  
Sbjct: 4   APKLTLNLQFPAAKAWPEHKALLP------RATVGGWIKAALFAD---GELTVRFVDAEE 54

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
             TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EA   GK    H 
Sbjct: 55  GRTLNRTYRGKDYSTNVLTFAYAESEDDPVT----GDLILCCPVVEKEAAEQGKPLVAHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH  +++A  ME LE  IL  LG  DPY 
Sbjct: 111 AHLLVHGTLHAQGYDHEVEEEAEEMEALETEILGKLGFPDPYR 153


>gi|255066351|ref|ZP_05318206.1| putative metalloprotease [Neisseria sicca ATCC 29256]
 gi|255049561|gb|EET45025.1| putative metalloprotease [Neisseria sicca ATCC 29256]
          Length = 171

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 14/163 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L+ + A   A    E                         +    ++SL+  D       
Sbjct: 19  LNFENASTAANLPSERDFYRWAWAALK------------NEYRRADISLILLDEEEARAY 66

Query: 71  NFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YRG D  TNVLSF         D  S  + GD+++  +++  EA   GK  E H  H
Sbjct: 67  NRDYRGKDYATNVLSFALNEGEILPDQFSDELCGDLIICPQVVLKEAAEQGKTAEQHFAH 126

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           L +HG LHL+GYDH+++ +A  ME LE  +++  G  +PY+ D
Sbjct: 127 LTMHGTLHLMGYDHIEETEAEEMEALEIRLMQAAGYPNPYQED 169


>gi|225567934|ref|ZP_03776959.1| hypothetical protein CLOHYLEM_04007 [Clostridium hylemonae DSM
           15053]
 gi|225163222|gb|EEG75841.1| hypothetical protein CLOHYLEM_04007 [Clostridium hylemonae DSM
           15053]
          Length = 167

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 17/155 (10%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E  L   CE +  K     +   Y       +++L+ T + +I+ +N E+RGID+PT+VL
Sbjct: 13  ETVLPIPCEELARKVAEEALD--YTGCPYEAQVNLLLTTNLQIQEMNEEFRGIDRPTDVL 70

Query: 85  SFPTAFAS---------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           SFP A                        L+LGDIV++ + +  +A   G   +     L
Sbjct: 71  SFPMAEYEHPGDFGCLKEQEDCFDPESGELLLGDIVISKDKVISQAEEFGHSLKREYAFL 130

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           I H  LHL GYDH+++K+   ME  +R IL  L I
Sbjct: 131 IAHSMLHLTGYDHMEEKERLDMEAKQREILNRLNI 165


>gi|325569846|ref|ZP_08145840.1| metal-dependent hydrolase [Enterococcus casseliflavus ATCC 12755]
 gi|325156969|gb|EGC69137.1| metal-dependent hydrolase [Enterococcus casseliflavus ATCC 12755]
          Length = 158

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS----------FPTAFASSD 94
           + G+       E+S+ F D+  I+ +N EYRG D PT+V+S           P  F  + 
Sbjct: 27  AAGHLDLPADTEMSVTFMDNAAIQEINREYRGKDMPTDVISFAFEEETAEEMPIIFDEAL 86

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                 LGDI+++ E  + +A   G  ++  L  L +HGFLH+ GYDH+  +D   M GL
Sbjct: 87  EEMPRDLGDIMISIERAKEQAAEYGHTYDRELGFLALHGFLHINGYDHMTPEDEKEMFGL 146

Query: 155 ERSILEDLGIN 165
           ++ IL+  G+ 
Sbjct: 147 QKEILDAYGLK 157


>gi|219847946|ref|YP_002462379.1| hypothetical protein Cagg_1028 [Chloroflexus aggregans DSM 9485]
 gi|254799905|sp|B8G6K6|RRMF_CHLAD RecName: Full=Probable rRNA maturation factor
 gi|219542205|gb|ACL23943.1| protein of unknown function UPF0054 [Chloroflexus aggregans DSM
           9485]
          Length = 153

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 8/142 (5%)

Query: 32  CEVVFAKAVSNLISKGYFVKENI---VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
            ++    A+    ++     E +    E+ +  T    +  LN ++RG+D PT+VLSF  
Sbjct: 11  DDLAVDAALVERAAQAVLTAEQVPAGCEVCIRITTDAELHRLNRDFRGVDAPTDVLSFAD 70

Query: 89  AFASSD----GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV- 143
              SS           LGDI ++Y+ + ++A   G      L +L +HG LHLLGYDH  
Sbjct: 71  DGNSSQFVTAPNLPRYLGDIAISYDRVLVQAAEYGHSPARELAYLTVHGMLHLLGYDHER 130

Query: 144 DDKDACVMEGLERSILEDLGIN 165
              D  +M   E +++  LG+ 
Sbjct: 131 GPADEALMRAREEAVMTALGLP 152


>gi|320529428|ref|ZP_08030516.1| conserved hypothetical protein TIGR00043 [Selenomonas artemidis
           F0399]
 gi|320138394|gb|EFW30288.1| conserved hypothetical protein TIGR00043 [Selenomonas artemidis
           F0399]
          Length = 154

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 11/159 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            ++++I+ +     +E+ +    E    +AV  +   G        E+S+  T+   I  
Sbjct: 1   MMEIRISAQ----PEELCIAPGDEAAVRRAVETV---GRLYGAEGAEVSVTLTNDAYIHE 53

Query: 70  LNFEYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           +N +YRG+D+PT+V+SF    +      D  +  +LGD+V++ E    +A   G  +   
Sbjct: 54  INRQYRGVDRPTDVISFALMESEEPEILDDPAGDVLGDLVISLERTRAQAEEYGHSYLRE 113

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           L  L +HG LHLLGYDH+++ +   ME  +R ++E LGI
Sbjct: 114 LSFLTVHGMLHLLGYDHMEEAERAEMEEEQRHVMEALGI 152


>gi|20807452|ref|NP_622623.1| putative metalloprotease [Thermoanaerobacter tengcongensis MB4]
 gi|26006913|sp|Q8RB52|RRMF_THETN RecName: Full=Probable rRNA maturation factor
 gi|20515977|gb|AAM24227.1| predicted metal-dependent hydrolase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 158

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 9/113 (7%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPT---------AFASSDGCSSLMLGDIVLAYEII 111
           F D+  I  LN  YRGID  T+VLSFP               D      +GDIV++ E  
Sbjct: 44  FVDNEEIRKLNKYYRGIDSSTDVLSFPLMEFEEIEEGEEDEKDAEEIYPIGDIVISLEKA 103

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           + +A   G  FE  + +L +H  LHLLGYDH  +++  +M   E  ++E LG+
Sbjct: 104 KEQAEEYGHSFEREVAYLTVHSMLHLLGYDHETEEERKLMREKEEKVMERLGL 156


>gi|239623718|ref|ZP_04666749.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521749|gb|EEQ61615.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 165

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 46/139 (33%), Positives = 66/139 (47%), Gaps = 16/139 (11%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------------- 88
           L +  Y       E++++ TD+  I  +N EYR ID PT+VLSFP               
Sbjct: 26  LAALDYEECPYEAEVNVILTDNEAIREINREYREIDSPTDVLSFPMVDYGTPSDFDHVEE 85

Query: 89  --AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                 +     LMLGDIV++ + +E +A   G      L  L+ H  LHL GYDH+++ 
Sbjct: 86  AVEDYFNPETGELMLGDIVVSVDKVEEQAEKYGHSETRELAFLVAHSMLHLFGYDHMEEG 145

Query: 147 DACVMEGLERSILEDLGIN 165
           +   ME  +R ILE  G  
Sbjct: 146 EREQMEDRQRKILETRGYT 164


>gi|254392584|ref|ZP_05007761.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294812551|ref|ZP_06771194.1| Putative metalloprotease [Streptomyces clavuligerus ATCC 27064]
 gi|326440996|ref|ZP_08215730.1| metal-binding heat shock protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197706248|gb|EDY52060.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294325150|gb|EFG06793.1| Putative metalloprotease [Streptomyces clavuligerus ATCC 27064]
          Length = 165

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDERAILDIARYALARMRIHPLS----------ELSVIVVDAEAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+   +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVATRQGAEAPTGHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAEQGLTGP 158


>gi|91206125|ref|YP_538480.1| putative metalloprotease [Rickettsia bellii RML369-C]
 gi|122425195|sp|Q1RGX3|RRMF_RICBR RecName: Full=Probable rRNA maturation factor
 gi|91069669|gb|ABE05391.1| Putative metal-dependent hydrolase [Rickettsia bellii RML369-C]
          Length = 183

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 26/182 (14%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I    + W +    + + + +  K     +S+   F +    ELS++ T++  I 
Sbjct: 1   MINVEIIKNYSKWREH---KQINKALIKKITQKTLSQFDNFSEIKQFELSILLTNNEEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------------------ASSDGCSSLMLGDIVL 106
           TLN ++R I+K TNVLSFP                          +      + LGDI  
Sbjct: 58  TLNKQFRNIEKATNVLSFPANELNWQDLRFSGNEIASSNKPIILENLGDSDYMHLGDIAF 117

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
            +++I  E+    K FENH +HL+IH  LHL+G+DH +D +  +ME LE  IL   GI+ 
Sbjct: 118 CHDVIYNESYEQQKTFENHFIHLLIHSILHLIGFDHQNDTETKIMENLEIEILAHFGISS 177

Query: 167 PY 168
           PY
Sbjct: 178 PY 179


>gi|326381614|ref|ZP_08203308.1| metal-binding heat shock protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199861|gb|EGD57041.1| metal-binding heat shock protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 180

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +   E  +         +   +             ELS+   DS  +  L
Sbjct: 1   MSIELFNESGIDVPEQLIIEAARFAMRRMEVH----------PGAELSIQLIDSESMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + ++  +  PT+V+SFP           +D     MLGDIVL  E    +A      FE+
Sbjct: 51  HMQWMDLPGPTDVMSFPMDELTPGGRPDADDPGPAMLGDIVLCPEFAGEQAKSQHHSFEH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +  L +HG LHLLG+DH + +D   M GL+  I+ + 
Sbjct: 111 EIAVLTVHGVLHLLGFDHAEPEDEREMFGLQGQIITEW 148


>gi|302560725|ref|ZP_07313067.1| metalloprotease [Streptomyces griseoflavus Tu4000]
 gi|302478343|gb|EFL41436.1| metalloprotease [Streptomyces griseoflavus Tu4000]
          Length = 165

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDAGAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           D     +LGDIVL  E+   +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCPEVAARQGEEAPTRHTMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAERGLTGP 158


>gi|297588409|ref|ZP_06947052.1| probable metal-dependent hydrolase [Finegoldia magna ATCC 53516]
 gi|297573782|gb|EFH92503.1| probable metal-dependent hydrolase [Finegoldia magna ATCC 53516]
          Length = 153

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +QI+     +  +  L +  E          I     + ++  E+SL F     I+ L
Sbjct: 1   MIIQISNRQDYFQIDDELTSDIESSIK------ICLIQELNDDNYEVSLSFVSEEEIKEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YR  D  T+VLSFP          + +LGDI++  +    +A       +  +V+L+
Sbjct: 55  NRDYRNKDSVTDVLSFPLEDDFQ--IQTNLLGDIIICCKRAVEQAKEYNHSIKREIVYLV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +H   HLLGYDH+D+ D  +M   E+S L+++GI   Y+ +
Sbjct: 113 VHSMFHLLGYDHIDESDKIIMRNKEKSALKEIGI---YKDE 150


>gi|296130045|ref|YP_003637295.1| protein of unknown function UPF0054 [Cellulomonas flavigena DSM
           20109]
 gi|296021860|gb|ADG75096.1| protein of unknown function UPF0054 [Cellulomonas flavigena DSM
           20109]
          Length = 150

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +  DE     L   V      +             +L +   D+  +  L
Sbjct: 1   MSVEVSNESGVEVDEAEFAALGRYVLDAMHVH----------PQADLFVRLVDTATMTDL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  +     PT+VLSFP          D     +LGD+VL  E+   +A   G      +
Sbjct: 51  HVRWMDEPGPTDVLSFPMDELTPGREGDPAGPGVLGDVVLCPEVAATQARAAGHSTAEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLGYDHV+  +   M  L+R +L
Sbjct: 111 LLLTTHGILHLLGYDHVEPDEEKEMFALQRRLL 143


>gi|254437107|ref|ZP_05050601.1| conserved hypothetical protein TIGR00043 [Octadecabacter
           antarcticus 307]
 gi|198252553|gb|EDY76867.1| conserved hypothetical protein TIGR00043 [Octadecabacter
           antarcticus 307]
          Length = 156

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 18/162 (11%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E+  W   + L TL +     A+S     G  ++ +  E+S++     RI  LN ++R 
Sbjct: 2   IEDDRW---LGLATLADRAAFAALS-----GVGLEASAFEISMLACGDTRISALNADFRQ 53

Query: 77  IDKPTNVLSFPTAFASSDGCSSLM----------LGDIVLAYEIIEIEANVLGKEFENHL 126
               TNVLS+P++   +D    +           LGDI ++Y+ I  EA   G    +H+
Sbjct: 54  KGAATNVLSWPSSERGADVDGDMPVQPQVPQDTQLGDIAISYDTIAREAAQSGTPLVDHV 113

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            HLI+HG LHLLG+DHV D D  +MEGLE  IL  L I DPY
Sbjct: 114 THLIVHGTLHLLGFDHVRDLDGALMEGLETEILGKLDIRDPY 155


>gi|165933701|ref|YP_001650490.1| metal-binding heat shock protein [Rickettsia rickettsii str. Iowa]
 gi|189038666|sp|B0BV24|RRMF_RICRO RecName: Full=Probable rRNA maturation factor
 gi|165908788|gb|ABY73084.1| hypothetical metal-binding protein [Rickettsia rickettsii str.
           Iowa]
          Length = 167

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    + + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 1   MINVEIVRHYNKWREH---KQINKSLIKKITQNILLRFDNFSKIKQFELSILLTNAAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
            LN ++R I+K TNVLSFP+                    + LGDI   YE+I  E+   
Sbjct: 58  ILNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDYMHLGDIAFCYEVIYNESCEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +HL+IH  LHL+G+DH +D +A +ME LE  IL   GI  PY
Sbjct: 118 HKTFENHFIHLLIHSILHLIGFDHQNDTEANIMENLEIEILSYFGIFPPY 167


>gi|118586861|ref|ZP_01544295.1| metal-dependent hydrolase [Oenococcus oeni ATCC BAA-1163]
 gi|118432693|gb|EAV39425.1| metal-dependent hydrolase [Oenococcus oeni ATCC BAA-1163]
          Length = 169

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 10/168 (5%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M+ K+     LD+ I +++     +     L + V A A        +   +   E+S+ 
Sbjct: 8   MNRKRNRKKMLDV-IVLDDKQKELDNDDAKLVKKVLAFAFD------FMQLKQNYEMSVN 60

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM--LGDIVLAYEIIEIEANVL 118
           F +  +I  +N EYR  D+ T+V+SF    +       +   LGD+ ++ +    +A   
Sbjct: 61  FVNDEKIHQINKEYRNTDRATDVISFALEESDRIHIDGVAEELGDLFISLDHAHAQAEEY 120

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDAC-VMEGLERSILEDLGIN 165
              +   L +L +HGFLHLLGYDH   + A   M GL+  ILE  G+ 
Sbjct: 121 LHSYNRELAYLAVHGFLHLLGYDHTRSQAAEDEMFGLQDKILEGYGLT 168


>gi|323141990|ref|ZP_08076841.1| translation metalloprotein YbeY [Phascolarctobacterium sp. YIT
           12067]
 gi|322413522|gb|EFY04390.1| translation metalloprotein YbeY [Phascolarctobacterium sp. YIT
           12067]
          Length = 168

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 12/162 (7%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +EN     E+  + L      + +  +       +E+  E+ +   D   I  LN EY
Sbjct: 3   INLENDQQKLELSAQVLER--LQEGLQAVARLNELPEES--EVDVTIVDDEEIHALNREY 58

Query: 75  RGIDKPTNVLSFPTAFASS--------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           RG+DKPT+VLSF                G    + GDI+++ E    +A   G   E  +
Sbjct: 59  RGMDKPTDVLSFALDEDCEDEDEPELIGGPEEHLFGDIIISAETALRQAEEYGHGLEREM 118

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            +L +HG  HLLGYDH+ ++D   M   E   L  + +++ Y
Sbjct: 119 TYLAVHGMFHLLGYDHMTEEDKAEMRAKEEEALRAINLSEEY 160


>gi|323342100|ref|ZP_08082333.1| metal-dependent hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464525|gb|EFY09718.1| metal-dependent hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 147

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 5/134 (3%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E   +  +   ++K  F  +N VE+++V  D   I   N E+R ID+PT+VLSF      
Sbjct: 18  ETYLSPILEETLNKTGF--KNPVEVNVVLVDDPSIHNFNKEFRDIDRPTDVLSF---EDG 72

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           S      M+GDI+++ + I  +A   G   +     L+ HG+LHLLGYDH   ++  VM 
Sbjct: 73  SMEGEVFMMGDIIISVDAIRRQAEEYGHSIKREFCFLVAHGYLHLLGYDHHTPEEEVVMF 132

Query: 153 GLERSILEDLGIND 166
           GL++ IL D+   D
Sbjct: 133 GLQKEILHDIARKD 146


>gi|311108331|ref|YP_003981184.1| metalloprotein, YbeY family protein [Achromobacter xylosoxidans A8]
 gi|310763020|gb|ADP18469.1| metalloprotein, YbeY family protein [Achromobacter xylosoxidans A8]
          Length = 157

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 46/116 (39%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           +  ELSL    +     LN ++RG D  TNVL+F            +  GDIV+   ++ 
Sbjct: 43  SAAELSLRLVGAAEGRRLNRDFRGRDYATNVLTFEYGVDPL----GVARGDIVMCVPVLV 98

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            EA    K   +H  HL IHG LH LGYDH+  +DA  ME LE + L D+ I DPY
Sbjct: 99  REAREQRKALLDHAAHLTIHGVLHALGYDHIKARDAKRMEALETATLADMRIADPY 154


>gi|239941042|ref|ZP_04692979.1| putative metalloprotease [Streptomyces roseosporus NRRL 15998]
 gi|239987521|ref|ZP_04708185.1| putative metalloprotease [Streptomyces roseosporus NRRL 11379]
 gi|291444482|ref|ZP_06583872.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291347429|gb|EFE74333.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 165

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDTDAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAKKQGEEAPTQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  L +HG LHLLGYDH +  +   M GL+ +I++  
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGW 149


>gi|289450697|ref|YP_003475263.1| GTP-binding protein Era [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185244|gb|ADC91669.1| GTP-binding protein Era [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 563

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 16/168 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENI-VELSLVFTDSHRIETLN 71
           +Q   E   W     LR +         S L    Y  +E +  E ++ F  +  + +LN
Sbjct: 3   IQFQKEKCKWST-AELRQIIRYTLQAGFSYLPFSDYLSEEGLQPEFAVTFIGADAMRSLN 61

Query: 72  FEYRGIDKPTNVLSFPT-------------AFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
            E RGIDK T+VLSFP              A   +   +S+ LGDIV+  +  E +A   
Sbjct: 62  KEQRGIDKVTDVLSFPMLAMKKGALEEHLTAADINPENNSVFLGDIVICLDRAEEQALEF 121

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGIN 165
               +  +  L +H  LHL+GYDHVD++ D   ME ++R +L++LGI 
Sbjct: 122 NHTMQREVAFLTLHSMLHLVGYDHVDNETDRLEMEEIQRELLDNLGIK 169


>gi|297194455|ref|ZP_06911853.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718735|gb|EDY62643.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 165

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     ++   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALSRMRIHPLS----------ELSVIVVDAEAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPSKDDEEPPQGLLGDIVLCPEVAKKQGEEAPTQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  L +HG LHLLGYDH +  +   M GL+ +I++  
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGW 149


>gi|154483546|ref|ZP_02025994.1| hypothetical protein EUBVEN_01250 [Eubacterium ventriosum ATCC
           27560]
 gi|149735456|gb|EDM51342.1| hypothetical protein EUBVEN_01250 [Eubacterium ventriosum ATCC
           27560]
          Length = 166

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 22/170 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ I  E     D +    +   V  +AV       +       E+++   D++ I  +
Sbjct: 1   MNIYIENEYDREID-VDYTDIINKVVCQAVD------FIKCPYECEVNVTIVDNNTIHEI 53

Query: 71  NFEYRGIDKPTNVLSFPTAFAS---------------SDGCSSLMLGDIVLAYEIIEIEA 115
           N E R ID+PT+VLSFP                    +     L+LGDIV++Y+ +  +A
Sbjct: 54  NREQRKIDRPTDVLSFPMLDYEVAGDFSMAEDDISNFNPDSGELILGDIVISYDKVIEQA 113

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                  +  L  L+ H  LHL G+DH+ D +   ME  +  IL +LGI 
Sbjct: 114 AEYNHSRKRELAFLVAHSMLHLFGFDHMVDDERIEMEEKQNIILNNLGIT 163


>gi|294085155|ref|YP_003551915.1| putative metal-dependent hydrolase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664730|gb|ADE39831.1| Predicted metal-dependent hydrolase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 240

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 77/169 (45%), Gaps = 18/169 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I  ++  W     +    +  F + +   +S           +SL+     +I  LN 
Sbjct: 38  IDIMTDHDCWS--AAMLGDVKAHFCQILDRALSAHDM---KDCAVSLLLCSDAKIRQLNH 92

Query: 73  EYRGIDKPTNVLSFPTAFASSDG-------------CSSLMLGDIVLAYEIIEIEANVLG 119
           ++RGIDK TNVLSFP A                        LGDI +AY I   EA    
Sbjct: 93  DHRGIDKATNVLSFPAADDDDMPYAMGAMDADDDNAPQRQELGDIAIAYGICAREAEESS 152

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
               +H+ HL  HG LHLLGYDH  D +A  ME LE S+LE LGI +PY
Sbjct: 153 IRISDHITHLFGHGVLHLLGYDHDQDAEADAMEALEISLLEALGIANPY 201


>gi|261364225|ref|ZP_05977108.1| putative metalloprotease [Neisseria mucosa ATCC 25996]
 gi|288567840|gb|EFC89400.1| putative metalloprotease [Neisseria mucosa ATCC 25996]
          Length = 171

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 15/175 (8%)

Query: 4   KKVNLPRLDLQ-----IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +    P L LQ     +  ENA     + L +  E  F +     +   Y       ++S
Sbjct: 3   RAKKYPFLSLQRQRFCLNFENA--STAVDLPS--ERDFYRWAWAALKSEY----RRTDIS 54

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEAN 116
           L+  D       N +YRG D  TNVLSF         D  S  + GD+++  +++  EA 
Sbjct: 55  LILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPDQVSDDLCGDLIICPQVVLKEAA 114

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
             GK  E H  HL +HG LHL+GYDH+++ +A  ME LE  +++  G  +PY+ D
Sbjct: 115 EQGKTAEQHFAHLTMHGTLHLMGYDHIEEAEAEEMEALEIRLMQAAGYPNPYQED 169


>gi|302518989|ref|ZP_07271331.1| metal-dependent hydrolase [Streptomyces sp. SPB78]
 gi|318062407|ref|ZP_07981128.1| metal-binding heat shock protein [Streptomyces sp. SA3_actG]
 gi|318079398|ref|ZP_07986730.1| metal-binding heat shock protein [Streptomyces sp. SA3_actF]
 gi|333027184|ref|ZP_08455248.1| putative metalloprotease [Streptomyces sp. Tu6071]
 gi|302427884|gb|EFK99699.1| metal-dependent hydrolase [Streptomyces sp. SPB78]
 gi|332747036|gb|EGJ77477.1| putative metalloprotease [Streptomyces sp. Tu6071]
          Length = 165

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +      +   + +S          ELS++  D   +E L
Sbjct: 1   MSIDVNNESGTEADEEAILDIARYALGRMRIHPLS----------ELSVILVDGPAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ E +          +
Sbjct: 51  HVQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAERQGREAPTEHSTD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+++I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQQAIVDGWRGERGLTGP 158


>gi|294629266|ref|ZP_06707826.1| metalloprotease [Streptomyces sp. e14]
 gi|292832599|gb|EFF90948.1| metalloprotease [Streptomyces sp. e14]
          Length = 165

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+   +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPGKDEEEPPQGLLGDIVLCPEVAAKQGAEAPTQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++D     G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDDWRAEKGLTGP 158


>gi|229916329|ref|YP_002884975.1| hypothetical protein EAT1b_0598 [Exiguobacterium sp. AT1b]
 gi|259647091|sp|C4L408|RRMF_EXISA RecName: Full=Probable rRNA maturation factor
 gi|229467758|gb|ACQ69530.1| protein of unknown function UPF0054 [Exiguobacterium sp. AT1b]
          Length = 158

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 8/150 (5%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            DE  L T  ++   +++    ++   V+E   ELS+ +  +  I  +N E+RG D PT+
Sbjct: 6   NDEHELLTTSQIELVESILQHAAQLEGVEE-PSELSVTYLTNAEIHEVNREWRGKDAPTD 64

Query: 83  VLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           V+SF              D     +LGD+V++ E    +A   G  FE  L  L IHGFL
Sbjct: 65  VISFAFDEMGDEEMDFMLDEDEPHLLGDLVISVERCREQAADYGHSFERELGFLAIHGFL 124

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HLLGYDH+  ++   M   +  +L    + 
Sbjct: 125 HLLGYDHMTPEEEAEMTARQEEVLTHFELK 154


>gi|225027038|ref|ZP_03716230.1| hypothetical protein EUBHAL_01294 [Eubacterium hallii DSM 3353]
 gi|224955502|gb|EEG36711.1| hypothetical protein EUBHAL_01294 [Eubacterium hallii DSM 3353]
          Length = 169

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E V    +   +   Y       ++ ++ TD+  I  +N E+R ID+PT+VLSFP A   
Sbjct: 18  ETVIKNVIEAALD--YEKCPYEAQVYVLLTDNEEIHEINKEHRQIDRPTDVLSFPMADYP 75

Query: 93  SDG----------------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
             G                   L+LGDI+++ + ++ +A   G      L  L+ H  LH
Sbjct: 76  VPGDFSDIEERDPDAFHPETGELILGDIIISMDKVKEQAKAYGHSNTRELAFLVAHSMLH 135

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGI 164
           L+GYDH+ D++  VME  +  IL++ G 
Sbjct: 136 LMGYDHMVDEERKVMEAKQEEILKNCGY 163


>gi|331001780|ref|ZP_08325302.1| hypothetical protein HMPREF0491_00164 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412754|gb|EGG92137.1| hypothetical protein HMPREF0491_00164 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 164

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 22/170 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I+ E+     +I L    E +  K V  + S  +       E+S+   D   I  +
Sbjct: 1   MTIEISYES-----KIKLDIPYEDIINKMV--VASLDFEDCPYEAEVSVTIVDDDEIRRI 53

Query: 71  NFEYRGIDKPTNVLSFPTAFAS---------------SDGCSSLMLGDIVLAYEIIEIEA 115
           N EYRGIDK T+VLSFP                    +     L+LGDI+L+ E I  +A
Sbjct: 54  NNEYRGIDKSTDVLSFPFNEFDIPGNFDNVEENVDAFNPESGELLLGDIILSTEHIIEQA 113

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G      L  L++H  LHL+GYDH+ D +   ME  +R ILE  GI+
Sbjct: 114 REYGHSETRELAFLVVHSMLHLMGYDHMIDDERKDMEDRQRKILEFEGIS 163


>gi|269123310|ref|YP_003305887.1| hypothetical protein Smon_0530 [Streptobacillus moniliformis DSM
           12112]
 gi|268314636|gb|ACZ01010.1| protein of unknown function UPF0054 [Streptobacillus moniliformis
           DSM 12112]
          Length = 154

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 11/159 (6%)

Query: 10  RLDLQIA---VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            L+L I+   ++N  + +E  +    E V      + + K  +       +SL+ TD+  
Sbjct: 1   MLNLDISFKDIDNKEYINEDKILEFSEFVIKNEREDYLDKELY-------ISLLLTDNKN 53

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           I+ +N EYR  D PT+V+SF      + G    ++GDIV++ + +E ++           
Sbjct: 54  IQEINREYREKDSPTDVISFAYNETENFG-GVEVVGDIVISLDRVEEQSKEYNHSVIREF 112

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            ++++HG LH+LGYDH+++ D  +M   E   L      
Sbjct: 113 YYVLVHGLLHILGYDHIEEDDKKIMREKEEYYLSKFNYT 151


>gi|227504551|ref|ZP_03934600.1| metalloprotease [Corynebacterium striatum ATCC 6940]
 gi|227198871|gb|EEI78919.1| metalloprotease [Corynebacterium striatum ATCC 6940]
          Length = 201

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 20/162 (12%)

Query: 11  LDLQIAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + ++   E+   G +E  L  +    F     N             E ++   D   I  
Sbjct: 1   MSIEFINESGFEGVNEEMLIDVASFAFGAMDIN----------PDAECTITAVDLETIAD 50

Query: 70  LNFEYRGIDKPTNVLSFPTAF---------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           L+  +  ++ PT+V+SFP              +      MLGDIVL  E    +AN  G 
Sbjct: 51  LHVRWMDLEGPTDVMSFPMDEITPGALGTRPDAPEMGPAMLGDIVLCPEFALRQANAAGH 110

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              + L  L +HG LHLLGYDH    +   M  L+  +L D 
Sbjct: 111 SLGHELALLTVHGCLHLLGYDHATPAEEKEMFSLQNELLADW 152


>gi|229824092|ref|ZP_04450161.1| hypothetical protein GCWU000282_01396 [Catonella morbi ATCC 51271]
 gi|229786446|gb|EEP22560.1| hypothetical protein GCWU000282_01396 [Catonella morbi ATCC 51271]
          Length = 176

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 30/170 (17%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+ +L    E +  + +    +  Y      +EL L    +  I+ LN +YRG+DKPT+V
Sbjct: 8   DQAYLAAGQEKLLHEVIEA--AAKYLKLPGGIELDLSIVSNEEIQALNRDYRGLDKPTDV 65

Query: 84  LSFPTAFASSD----------------------------GCSSLMLGDIVLAYEIIEIEA 115
           LSF     SS+                                  LGDI+++Y   + +A
Sbjct: 66  LSFALTEVSSEYDVDFAHLDLAEEAEETEDLEETEFEEEEAIPQHLGDIIISYPRAQEQA 125

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G   +  L  L +HGFLHL GYDH  +++A  M  ++  +L   G+ 
Sbjct: 126 QDYGHSLDRELAFLAVHGFLHLNGYDHQTEEEAQEMFRIQEEVLTTYGLT 175


>gi|269956974|ref|YP_003326763.1| hypothetical protein Xcel_2187 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305655|gb|ACZ31205.1| protein of unknown function UPF0054 [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 153

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 11/153 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+        +  L E  FA     ++   +   +   ELS++F D+  +  L
Sbjct: 1   MSIEVANESGY-----DVEGLDEAEFAALARYVLDAMHVHPQ--AELSILFVDTTVMTDL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  +     PT+VLSFP          D      LGDIVL  E+   +A   G      +
Sbjct: 54  HVRWMDEPGPTDVLSFPMDELRPGREGDLTPPGTLGDIVLCPEVATQQALTAGHSAIEEM 113

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLGYDH + ++   M GL+R +L
Sbjct: 114 LLLTTHGILHLLGYDHAEPEEEKEMFGLQRRLL 146


>gi|317404693|gb|EFV85085.1| hypothetical protein HMPREF0005_04068 [Achromobacter xylosoxidans
           C54]
          Length = 157

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAY 108
            V+ +  ELSL    +     LN ++R  D  TNVL+F            +  GDIV+  
Sbjct: 39  LVEFSAAELSLRLVGAAEGRRLNRDFRQRDYATNVLTFEYGVDPL----GVARGDIVMCV 94

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            ++  EA    K   +H  HL +HG LH LGYDH+  +DA  ME LE + L  +GI DPY
Sbjct: 95  PVLVREAREQRKALLDHAAHLTLHGVLHSLGYDHIKARDARRMEALETATLARMGIADPY 154


>gi|229824784|ref|ZP_04450853.1| hypothetical protein GCWU000182_00133 [Abiotrophia defectiva ATCC
           49176]
 gi|229791113|gb|EEP27227.1| hypothetical protein GCWU000182_00133 [Abiotrophia defectiva ATCC
           49176]
          Length = 168

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 18/159 (11%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           E       +  + + +  +I K    +     +E++++ T +  I+  N  +R ID+PT+
Sbjct: 6   ENEAEREPDFDYEEVIKAVIEKTVETENCPYEIEVNVLLTGNDEIQEANRNFRDIDRPTD 65

Query: 83  VLSFPTAFAS----------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           VLSFP    S                +     L+LGDI+++ + +  +A   G   +   
Sbjct: 66  VLSFPMVDYSSPSDFSTVNESPECYLNPETDELVLGDIMISVDKVYEQAEEYGHSRKREF 125

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             LI H  LHLLGYDH++D++  VME  + ++LE LGI 
Sbjct: 126 AFLIAHSMLHLLGYDHMEDEERVVMEAKQEAVLEALGIT 164


>gi|229829053|ref|ZP_04455122.1| hypothetical protein GCWU000342_01138 [Shuttleworthia satelles DSM
           14600]
 gi|229792216|gb|EEP28330.1| hypothetical protein GCWU000342_01138 [Shuttleworthia satelles DSM
           14600]
          Length = 164

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/162 (30%), Positives = 68/162 (41%), Gaps = 21/162 (12%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E          + L E V  KA+       Y       E+S+   D  R+  +N EYR I
Sbjct: 7   EECGLDLPFDYKKLLETVIRKALD------YERFPFEAEVSVTLVDLDRMHQINREYRQI 60

Query: 78  DKPTNVLSFPTAFASSDGC---------------SSLMLGDIVLAYEIIEIEANVLGKEF 122
           D+PT+VLSFP     + G                   +LGDIVL    +  +A   G   
Sbjct: 61  DRPTDVLSFPFIDYPAPGDFSEIEKTDDFFNPDSGEAVLGDIVLCIPRLVSQAQDYGHST 120

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
                 LI H  LHL+GYDH+ D +   ME  +  +L+ LGI
Sbjct: 121 RREFAFLIAHSMLHLMGYDHMTDAERIDMERRQSEMLDQLGI 162


>gi|296269140|ref|YP_003651772.1| hypothetical protein Tbis_1157 [Thermobispora bispora DSM 43833]
 gi|296091927|gb|ADG87879.1| protein of unknown function UPF0054 [Thermobispora bispora DSM
           43833]
          Length = 156

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +  DE  L  L E V  +   N           + ELS++  D   +  L
Sbjct: 1   MSIELANESGVEIDESALVDLAEHVLHRMGIN----------PLAELSILVVDEAAMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +  + G   PT+VL+FP                +  +LGD+VL  ++   +A   G   +
Sbjct: 51  HERWMGEPGPTDVLAFPMDELRPHSTRDEEHPPNPALLGDVVLCPQVAAKQAAEAGHGAQ 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  L  HG LHLLGYDH + ++   M GL+  +L   
Sbjct: 111 EELELLCTHGILHLLGYDHAEPEEHAEMFGLQEELLNSW 149


>gi|323340792|ref|ZP_08081044.1| metalloprotease [Lactobacillus ruminis ATCC 25644]
 gi|323091915|gb|EFZ34535.1| metalloprotease [Lactobacillus ruminis ATCC 25644]
          Length = 159

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 23/168 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIE 68
           +DL+I  +     +E            K + +++  +  Y       E+S+   D+  I 
Sbjct: 1   MDLEIYDDTKNVPEEK----------IKLIEDILNFAGSYLKLPENTEMSVTLMDNEHIH 50

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANV 117
            +N +YRG+DKPT+V+SF       D                 +GDI+++ + ++ +A  
Sbjct: 51  EINKKYRGVDKPTDVISFAIEEDDPDEVPIILPEDEEFDIPKNIGDIMVSMDKVKEQAEY 110

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LG   +  L  L++HGFLHL GYDH+ ++D   M GL+R IL+  G+ 
Sbjct: 111 LGHSEDRELGFLVVHGFLHLNGYDHMKEEDEKEMFGLQREILDSYGLT 158


>gi|84502866|ref|ZP_01000979.1| hypothetical protein OB2597_14786 [Oceanicola batsensis HTCC2597]
 gi|84388849|gb|EAQ01719.1| hypothetical protein OB2597_14786 [Oceanicola batsensis HTCC2597]
          Length = 164

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 16/166 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E+  W     L  L E      +++L      +     E+SL+  D  RI  LN 
Sbjct: 4   IDIIIEDERW-TATDLGPLAEAAATATLAHL-----GLDPGDWEISLLACDDARIAALNG 57

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLM----------LGDIVLAYEIIEIEANVLGKEF 122
           ++RG   PTNVLS+P+   +++    +           LGDI +A+E  + EA   G+  
Sbjct: 58  DFRGRRAPTNVLSWPSEERAAEAPGQVPTPPDPDGDPELGDIAIAFETCDREAREAGRPM 117

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            +H+ HLI+H  LHLLGYDH  D DA +MEG E  IL  +G+ +PY
Sbjct: 118 ADHVTHLIVHATLHLLGYDHESDLDATLMEGSEVEILGKMGLPNPY 163


>gi|254450088|ref|ZP_05063525.1| conserved hypothetical protein TIGR00043 [Octadecabacter
           antarcticus 238]
 gi|198264494|gb|EDY88764.1| conserved hypothetical protein TIGR00043 [Octadecabacter
           antarcticus 238]
          Length = 156

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 10/132 (7%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------ 100
           G  ++    E+SL+  D  RI  LN ++R    PTNVLS+P+    ++    +       
Sbjct: 24  GVGLEAAAFEISLLACDDARICVLNADFRQKGTPTNVLSWPSNERGAEADGDMPVQPQLP 83

Query: 101 ----LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LGDI ++Y+    EA   G  F +H+ HLI+HG LHLLG+DH+ D D  +MEGLE 
Sbjct: 84  QDTELGDIAISYDTCAREAAQSGTPFADHVTHLIVHGTLHLLGFDHLRDLDGALMEGLET 143

Query: 157 SILEDLGINDPY 168
            IL  L I DPY
Sbjct: 144 EILGKLDIADPY 155


>gi|114571574|ref|YP_758254.1| hypothetical protein Mmar10_3035 [Maricaulis maris MCS10]
 gi|122314893|sp|Q0AK77|RRMF_MARMM RecName: Full=Probable rRNA maturation factor
 gi|114342036|gb|ABI67316.1| protein of unknown function UPF0054 [Maricaulis maris MCS10]
          Length = 160

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + + VE+  W        L E   + A   L  +   V      ++++      + ++N 
Sbjct: 4   VDLIVEDDAWSSLAGKTRLVEEAISAACKELPDRTPGV------VAILLGGDEGVASMNA 57

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++RG    TNVLSFP    +        LGDI LA+ +I+ EA        +HL HLIIH
Sbjct: 58  QFRGKAGATNVLSFPAGEHAD-----NHLGDIALAHGVIQREAEDRDIALADHLRHLIIH 112

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           GFLHL G+DH  D +A VME +ER  L  LG+ DPY
Sbjct: 113 GFLHLQGFDHQQDDEAEVMEAIERRALARLGVADPY 148


>gi|83313564|ref|YP_423828.1| metal-dependent hydrolase [Magnetospirillum magneticum AMB-1]
 gi|123540295|sp|Q2VYQ6|RRMF_MAGSA RecName: Full=Probable rRNA maturation factor
 gi|82948405|dbj|BAE53269.1| Predicted metal-dependent hydrolase [Magnetospirillum magneticum
           AMB-1]
          Length = 164

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/132 (42%), Positives = 84/132 (63%), Gaps = 3/132 (2%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--- 96
           ++ +      + + +VELS+V  D   ++ LN ++RG D+PTNVLSF +           
Sbjct: 30  LAAIALGAVDLPDGVVELSIVLADDATVQGLNRDWRGKDQPTNVLSFASLDDEDAPVVPG 89

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           + L+LGD++LA+E    EA+  GK   +H  HL++HG LHLLGYDH+DD++A  ME LE 
Sbjct: 90  APLLLGDVILAFETCAAEAHDQGKTLADHFSHLVVHGVLHLLGYDHMDDEEAAEMEALET 149

Query: 157 SILEDLGINDPY 168
           ++L  LGI+DPY
Sbjct: 150 TLLAALGIDDPY 161


>gi|156744199|ref|YP_001434328.1| hypothetical protein Rcas_4283 [Roseiflexus castenholzii DSM 13941]
 gi|189040181|sp|A7NRW4|RRMF_ROSCS RecName: Full=Probable rRNA maturation factor
 gi|156235527|gb|ABU60310.1| protein of unknown function UPF0054 [Roseiflexus castenholzii DSM
           13941]
          Length = 159

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
            +  +AV+  +          VE+S++ TD   +  LN  YRG+D PT+VLSF      S
Sbjct: 23  TLVERAVAQTLRTDDVAGP--VEISILITDDADVHRLNQTYRGVDAPTDVLSFAEDDDHS 80

Query: 94  ---DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDAC 149
                 +   LGDI ++++ +  +A   G   E  L  L++HG LHLLGYDH     D  
Sbjct: 81  FVRPPDAPRYLGDIAISWDRVVAQAAEYGHSRERELAFLVVHGVLHLLGYDHERGPVDEA 140

Query: 150 VMEGLERSILEDLGIN 165
            M   E +IL  LG++
Sbjct: 141 DMRAREEAILGALGLS 156


>gi|229552358|ref|ZP_04441083.1| possible metal-dependent hydrolase [Lactobacillus rhamnosus LMS2-1]
 gi|258539729|ref|YP_003174228.1| metalloprotease [Lactobacillus rhamnosus Lc 705]
 gi|229314340|gb|EEN80313.1| possible metal-dependent hydrolase [Lactobacillus rhamnosus LMS2-1]
 gi|257151405|emb|CAR90377.1| Metalloprotease [Lactobacillus rhamnosus Lc 705]
          Length = 152

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 4/123 (3%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLG 102
                 N  E+S+       I+ +N EYR  D+ T+V+SF       D       +  +G
Sbjct: 29  QQLALPNDTEMSITIVGDDAIQKINREYRDTDRATDVISFAIEDGEDDLPLMPGMAKNIG 88

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           D+ +    +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM  L++ IL   
Sbjct: 89  DLFIDPLTVRRHAKEYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVMIPLQKKILTAY 148

Query: 163 GIN 165
           G+ 
Sbjct: 149 GLT 151


>gi|199599322|ref|ZP_03212720.1| Predicted metal-dependent hydrolase [Lactobacillus rhamnosus HN001]
 gi|258508548|ref|YP_003171299.1| metalloprotease [Lactobacillus rhamnosus GG]
 gi|199589761|gb|EDY97869.1| Predicted metal-dependent hydrolase [Lactobacillus rhamnosus HN001]
 gi|257148475|emb|CAR87448.1| Metalloprotease [Lactobacillus rhamnosus GG]
 gi|259649855|dbj|BAI42017.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 152

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 4/123 (3%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLG 102
                 N  E+S+       I+ +N EYR  D+ T+V+SF       D       +  +G
Sbjct: 29  QQLALPNDTEMSITIVGDDAIQKINREYRDTDRATDVISFAIEDGEDDLPLLPGMAKNIG 88

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           D+ +    +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM  L++ IL   
Sbjct: 89  DLFIDPLTVRRHAKEYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVMIPLQKKILTAY 148

Query: 163 GIN 165
           G+ 
Sbjct: 149 GLT 151


>gi|187925304|ref|YP_001896946.1| hypothetical protein Bphyt_3331 [Burkholderia phytofirmans PsJN]
 gi|238689582|sp|B2SYI7|RRMF_BURPP RecName: Full=Probable rRNA maturation factor
 gi|187716498|gb|ACD17722.1| protein of unknown function UPF0054 [Burkholderia phytofirmans
           PsJN]
          Length = 153

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 14/163 (8%)

Query: 8   LPRLDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            P+L L +    A  W +   L           V+  I    F      EL++ F D+  
Sbjct: 4   APKLTLNLQFPAARSWPEHKALLP------RATVAGWIKAALFAD---GELTVRFVDADE 54

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
             TLN  YRG D  TNVL+F  A +  D  +    GD++L   ++E EA   GK    H 
Sbjct: 55  GRTLNRTYRGKDYSTNVLTFAYAESEDDPVT----GDLILCCPVVEKEAAEQGKPLIAHY 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            HL++HG LH  GYDH  +++A  ME +E  IL  LG  DPY+
Sbjct: 111 AHLLVHGTLHAQGYDHEVEEEAEEMEAIETEILAKLGFPDPYQ 153


>gi|332670852|ref|YP_004453860.1| hypothetical protein Celf_2346 [Cellulomonas fimi ATCC 484]
 gi|332339890|gb|AEE46473.1| protein of unknown function UPF0054 [Cellulomonas fimi ATCC 484]
          Length = 150

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+    DE     L   V      +             ELS++   +  +  L
Sbjct: 1   MSIEVNNESGHDVDEAEFAALARFVLDAMHVH----------PQTELSIMLVGTDVMTDL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++     PT+VLSFP          +   + +LGD+VL  E+   +A   G      L
Sbjct: 51  HVKWMDEPGPTDVLSFPMDELRPGREGEPTPAGLLGDVVLCPEVAAQQARAAGHSTAEEL 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLGYDHV+ ++   M  L+R +L
Sbjct: 111 LLLTTHGILHLLGYDHVEPEEEKEMFALQRRLL 143


>gi|300866177|ref|ZP_07110895.1| putative metalloprotease Tery_5027 [Oscillatoria sp. PCC 6506]
 gi|300335833|emb|CBN56055.1| putative metalloprotease Tery_5027 [Oscillatoria sp. PCC 6506]
          Length = 177

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 25/177 (14%)

Query: 11  LDLQIAVENALWGD----------------EIHLRTLCEVVFAKAVSNLISKGYFVKENI 54
           ++++++V++  W                  +IH  T  E  F   +  L      V    
Sbjct: 1   MEIEVSVQDYFWEANESTSATISPKSIAEGQIHPETW-ETWFQTWLETLSPDIGPVP--S 57

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAY 108
            ELSL  T    ++TLN +YR  ++PT+VL+F     +            L LGDIV++ 
Sbjct: 58  CELSLRLTGDPEMQTLNSQYRQQNQPTDVLAFAALEVNCPHPQEMVASMPLYLGDIVISV 117

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +    +A          L  L  HGFLHLLG+DH D+     M   +  +L+ +G+ 
Sbjct: 118 DTAHRQAQQQHHPLTTELAWLAAHGFLHLLGWDHPDEDSLNSMLNQQEILLKTIGLT 174


>gi|257055401|ref|YP_003133233.1| putative metalloprotease [Saccharomonospora viridis DSM 43017]
 gi|256585273|gb|ACU96406.1| conserved hypothetical protein TIGR00043 [Saccharomonospora viridis
           DSM 43017]
          Length = 183

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +  DE  + +       +   +           + ELS+V      +E L
Sbjct: 1   MSIEIANESGIDVDEASIVSAARFALDRMEVS----------PLAELSIVLVTLDVMEDL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V++FP           +   S  +LGDIVL     + +A   G    +
Sbjct: 51  HERWMDLPGPTDVMAFPMDELEVGRRPDAAEPSPALLGDIVLCPAFAKDQARKAGHSLLD 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH + ++   M  L+  IL D 
Sbjct: 111 ELHLLTVHGVLHLLGYDHAEPEEEREMFALQNRILADF 148


>gi|220920279|ref|YP_002495580.1| hypothetical protein Mnod_0233 [Methylobacterium nodulans ORS 2060]
 gi|219944885|gb|ACL55277.1| protein of unknown function UPF0054 [Methylobacterium nodulans ORS
           2060]
          Length = 159

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/159 (35%), Positives = 78/159 (49%), Gaps = 10/159 (6%)

Query: 12  DLQIAVENALWGDEI-HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++ + VE+  W   +  L          A++ L   G       VE+S+V TD   ++ L
Sbjct: 4   EIDVVVEDERWDRAVPDLGGFVRGAVEAALAVLPPGG------PVEVSVVLTDDAAVQEL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +RG DKPTNVLSFP       G     LGD+VLAY+ +  E+    K   +HL HL+
Sbjct: 58  NRTWRGKDKPTNVLSFPAGH--PHGGDLRPLGDVVLAYDTMLRESGEQSKPLGHHLAHLL 115

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSI-LEDLGINDPY 168
           +HG LHLLG DH   +           + L  LG+ DPY
Sbjct: 116 VHGTLHLLGQDHETGEAEAEAMEALEVVALRRLGVPDPY 154


>gi|260890435|ref|ZP_05901698.1| putative metalloprotease [Leptotrichia hofstadii F0254]
 gi|260860055|gb|EEX74555.1| putative metalloprotease [Leptotrichia hofstadii F0254]
          Length = 157

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVE--LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
             E    + VS ++   Y  + +  E  LSL+ T + +I+ +N EYR  D PT+V+SF  
Sbjct: 21  FDEEKIKEFVSYILKDEYKEEFDKNEYYLSLLITTNAQIQEINHEYRQKDTPTDVISFAY 80

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
               + G  + MLGDIV++ E ++ +++  G   E    +++ HG LHLLGYDH+++KD 
Sbjct: 81  NETENFGAMN-MLGDIVISIERVKEQSSEYGHSDEREFYYVLCHGMLHLLGYDHIEEKDK 139

Query: 149 CVMEGLERSILEDLGI 164
            VM   E  IL     
Sbjct: 140 VVMRRREEEILSKFNY 155


>gi|182438796|ref|YP_001826515.1| putative metalloprotease [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326779451|ref|ZP_08238716.1| metalloprotease ybeY [Streptomyces cf. griseus XylebKG-1]
 gi|238689002|sp|B1VY47|RRMF_STRGG RecName: Full=Probable rRNA maturation factor
 gi|178467312|dbj|BAG21832.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326659784|gb|EGE44630.1| metalloprotease ybeY [Streptomyces cf. griseus XylebKG-1]
          Length = 165

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDTDAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAKKQGEEAPTQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  L +HG LHLLGYDH +  +   M GL+ +I++  
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGW 149


>gi|328465884|gb|EGF37067.1| hypothetical protein AAULH_07516 [Lactobacillus helveticus MTCC
           5463]
          Length = 174

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +  + DE+         +   +  L+  +K    K+N +E+S+ F D +R   +N +YR 
Sbjct: 5   DVTYHDEVGFLDDKNRDWRDWIMKLLLLAKKEIGKDNNLEMSINFVDEYRSHEINLKYRD 64

Query: 77  IDKPTNVLSFPTAFASS---------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            D+PT+V+SF                D      +GD+ +   +I+  +   G  F+    
Sbjct: 65  KDRPTDVISFAIQDGEDAIDLSAFEDDPDFQEDIGDLFMCPSVIKRHSKEYGTGFDREFG 124

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + ++HGFLHL GYDH+   +A  M G++  +LE+ G+ 
Sbjct: 125 YTVVHGFLHLNGYDHIKPDEAKEMFGIQGKVLEECGLP 162


>gi|227513293|ref|ZP_03943342.1| metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577]
 gi|227083494|gb|EEI18806.1| metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577]
          Length = 161

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 19/167 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL+I  +      E   + + +V+         +  Y    +  E+S+   +++ I  +
Sbjct: 1   MDLEIYDKTEKGISEKDEKLIRDVLN-------FAGSYIHLADNTEMSVTLVNNNEIHKI 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM------------LGDIVLAYEIIEIEANVL 118
           N EYRG+D+ T+V+SF     + D    ++            +GDI ++ + +  +A+ L
Sbjct: 54  NREYRGVDRATDVISFAIEDEAEDDDFPIVMDEDMQESIPENIGDIFVSVDKVAEQADYL 113

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G  F+  L  L++HGFLHL GYDH++  DA +M  L++ IL   G+ 
Sbjct: 114 GHSFQRELGFLVVHGFLHLNGYDHMEKADADIMFPLQKEILNAYGLK 160


>gi|297617803|ref|YP_003702962.1| hypothetical protein Slip_1638 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145640|gb|ADI02397.1| protein of unknown function UPF0054 [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 158

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 7/121 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-------SLMLGDI 104
               E+SLV  D   I + N EYRG+D+PT+VLSF     +SD            +LGDI
Sbjct: 36  PPETEVSLVLVDEEEIRSFNREYRGVDRPTDVLSFALNEGTSDEPGYEAPEEMEPVLGDI 95

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           +++ E  E +    G      + +L +HG LHLLGYDH D++    M  +E  +L+D+G+
Sbjct: 96  IISLETAEDQGRDYGHGLAREVAYLAVHGMLHLLGYDHQDEEARTEMRLMEERVLKDVGL 155

Query: 165 N 165
           +
Sbjct: 156 D 156


>gi|260574095|ref|ZP_05842100.1| protein of unknown function UPF0054 [Rhodobacter sp. SW2]
 gi|259023561|gb|EEW26852.1| protein of unknown function UPF0054 [Rhodobacter sp. SW2]
          Length = 168

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/165 (36%), Positives = 76/165 (46%), Gaps = 19/165 (11%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E+  W D      L     A A +        +      L L+  D  RI  LN  +R  
Sbjct: 10  EDPRWQD------LNLATLADAAAQATLTAVGLDPQGFTLCLMGCDDARIAELNAAFRAK 63

Query: 78  DKPTNVLSFPTAFASSD-------------GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            + TNVLS+P+   +++                   LGDI +A+E    EA   GK    
Sbjct: 64  GQATNVLSWPSEDRAAEVPGGVPELPEPGTADDPEELGDIAIAWETCAREAAEQGKPQVA 123

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           H+ HLI+HG LHLLGYDHVDD DA +ME  E  IL  LGI DPY 
Sbjct: 124 HVTHLIVHGVLHLLGYDHVDDADAELMETTEAGILAGLGIADPYA 168


>gi|315640635|ref|ZP_07895741.1| metalloprotease [Enterococcus italicus DSM 15952]
 gi|315483663|gb|EFU74153.1| metalloprotease [Enterococcus italicus DSM 15952]
          Length = 160

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)

Query: 25  EIHLRTLCEVVFAKAVSNLI-----SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           EI      E V AK +  +      +  +       E+S+ F D++ I+ +N  YR  D 
Sbjct: 2   EIAFIDENERVTAKKMQEIDDLLQYAASHLDLPEDTEMSITFMDNNEIQEINRVYRNKDM 61

Query: 80  PTNVLSFPTAFASSDGCS------------SLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           PT+V+SF       D                  LGD++++ E    +A   G   +  L 
Sbjct: 62  PTDVISFALEEEGEDELPIIFDEEFDDSQFPRNLGDLMISVERANEQAEEYGHSVDRELG 121

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            L +HGFLHL GYDH+  +D  VM GL++ IL+  G+ 
Sbjct: 122 FLALHGFLHLNGYDHMTPEDEKVMFGLQKEILDAYGLK 159


>gi|21220993|ref|NP_626772.1| putative metalloprotease [Streptomyces coelicolor A3(2)]
 gi|256787845|ref|ZP_05526276.1| putative metalloprotease [Streptomyces lividans TK24]
 gi|289771730|ref|ZP_06531108.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|26006934|sp|Q9L2L4|RRMF_STRCO RecName: Full=Probable rRNA maturation factor
 gi|6723881|emb|CAB66427.1| conserved hypothetical protein SCC117.06 [Streptomyces coelicolor
           A3(2)]
 gi|289701929|gb|EFD69358.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 165

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDAEAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+   +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPSKDEEEAPQGLLGDIVLCPEVAAKQGAEAPTEHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAEKGLTGP 158


>gi|302545480|ref|ZP_07297822.1| putative metalloprotease [Streptomyces hygroscopicus ATCC 53653]
 gi|302463098|gb|EFL26191.1| putative metalloprotease [Streptomyces himastatinicus ATCC 53653]
          Length = 165

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELSL+  D+  +E L
Sbjct: 1   MAIDVNNESGTDIDERAILDVARYALARMRIHPLS----------ELSLIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           D     +LGDIVL  ++ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPVKDDDEPPQGLLGDIVLCPDVAKKQGEEAPTGHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL----EDLGINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I+     + G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDERAEMFGLQAAIIDGWRAEYGLTGP 158


>gi|163814101|ref|ZP_02205493.1| hypothetical protein COPEUT_00254 [Coprococcus eutactus ATCC 27759]
 gi|158450550|gb|EDP27545.1| hypothetical protein COPEUT_00254 [Coprococcus eutactus ATCC 27759]
          Length = 170

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 21/173 (12%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + + +EN     EI      E V  + +   +   +     + E++++ TD+  I  +N 
Sbjct: 1   MSVNIENEYGDIEI---KNYETVINEIIQASLD--FLKCPYVCEVNVLLTDNDSIHEINN 55

Query: 73  EYRGIDKPTNVLSFPTAFASSDG----------------CSSLMLGDIVLAYEIIEIEAN 116
           + R ID+ T+VLSFP    +  G                   L+LGDIV++ + +  +A 
Sbjct: 56  QQRNIDRATDVLSFPLIDYTIPGNFDGLEDSRCDNFDLTTGELLLGDIVISIDKVYEQAA 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
                    L  L+ H  LHL GYDH+++ +  VME ++  IL   G    YE
Sbjct: 116 EYNHSKTRELAFLVAHSMLHLSGYDHMEEDERKVMEDMQEKILTTKGYTRDYE 168


>gi|302670671|ref|YP_003830631.1| hypothetical protein bpr_I1311 [Butyrivibrio proteoclasticus B316]
 gi|302395144|gb|ADL34049.1| hypothetical protein bpr_I1311 [Butyrivibrio proteoclasticus B316]
          Length = 167

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 17/131 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM----------- 100
              VE+SL  TD   I  +N E+R ID PT+VLSFP       G  S++           
Sbjct: 35  PYEVEISLTITDDEGIREINNEFRQIDSPTDVLSFPNVSYDEPGDFSVIDGEQKVDLLNP 94

Query: 101 ------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                  GDIV+    +  +A   G   +     L+ H  LHL GYDH+++++A VMEG 
Sbjct: 95  DTGNISFGDIVINVNRVRSQALEYGHSEKREFAFLVAHSMLHLCGYDHMEEQEAAVMEGK 154

Query: 155 ERSILEDLGIN 165
           +  IL  LGI 
Sbjct: 155 QNDILTYLGIT 165


>gi|33866843|ref|NP_898402.1| hypothetical protein SYNW2313 [Synechococcus sp. WH 8102]
 gi|46577382|sp|Q7U3W4|RRMF_SYNPX RecName: Full=Probable rRNA maturation factor
 gi|33639444|emb|CAE08828.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 16/177 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAK-----------AVSNLISKGYFVKENIVELSL 59
           ++L +A++ A         +L E    +           A  +L       + + V L L
Sbjct: 1   MELDLALDAAGPWSPEDPSSLIETQTWQITLVDWIQTICADPSLPCPALVCQADEVSLGL 60

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANV 117
            FTD   I  LN  +R  ++ T+VLSF     +      S + LGDIV++ +    +A+ 
Sbjct: 61  RFTDDATITALNSTWRQRNQATDVLSFAALEEAPGLPDVSCVELGDIVISLDTARRQASE 120

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE---DLGINDPYEVD 171
            G      L  L+ HG LHLLG+DH D++    M  L+  +L+   ++ I DP+ VD
Sbjct: 121 HGHNLTRELRWLVSHGLLHLLGWDHPDEESLVAMLQLQEQLLDGGSNVRIRDPHSVD 177


>gi|227510286|ref|ZP_03940335.1| metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189938|gb|EEI70005.1| metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 161

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 19/167 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL+I  +      E   + + +V+         +  Y    +  E+S+   ++  I  +
Sbjct: 1   MDLEIYDKTEKGISEKDEKMIRDVLN-------FAGSYIHLADNTEMSVTLVNNDEIHKI 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM------------LGDIVLAYEIIEIEANVL 118
           N EYRG+D+ T+V+SF     + D    ++            +GDI ++ + +  +A+ L
Sbjct: 54  NREYRGVDRATDVISFAIEDEAEDDDFPIVMDEDMQESIPENIGDIFVSVDKVAEQADYL 113

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G  F+  L  L++HGFLHL GYDH++  DA +M  L++ IL   G+ 
Sbjct: 114 GHSFQRELGFLVVHGFLHLNGYDHMEKADADIMFPLQKEILNAYGLK 160


>gi|332981673|ref|YP_004463114.1| hypothetical protein Mahau_1094 [Mahella australiensis 50-1 BON]
 gi|332699351|gb|AEE96292.1| protein of unknown function UPF0054 [Mahella australiensis 50-1
           BON]
          Length = 161

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 18/165 (10%)

Query: 13  LQIAVENALWGDEI--HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + I +++     EI   +  L E V  +++           E  +E+S++  D+ +I+ L
Sbjct: 1   MNILIDDRQSVMEIRDDVYDLLEQVVKRSIE------LEGLEPDIEVSIILIDNEQIKEL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSS----------LMLGDIVLAYEIIEIEANVLGK 120
           N ++RGID+ T+VLSFP     SD              L+LGDI ++ E    +A   G 
Sbjct: 55  NRDFRGIDRETDVLSFPAIDYESDEGEPVEDINMDTGDLILGDIAISVEKAAQQAEEYGH 114

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            F   +  L +HG  HLLGYDH D+++A +M   E  +L  LG+ 
Sbjct: 115 SFYREMGFLTVHGMFHLLGYDHEDEEEATIMRQREEMVLSSLGLE 159


>gi|15606551|ref|NP_213931.1| hypothetical protein aq_1354 [Aquifex aeolicus VF5]
 gi|6686198|sp|O67367|RRMF_AQUAE RecName: Full=Probable rRNA maturation factor
 gi|37927359|pdb|1OZ9|A Chain A, Crystal Structure Of Aq_1354, A Hypothetical Protein From
           Aquifex Aeolicus
 gi|2983779|gb|AAC07338.1| hypothetical protein aq_1354 [Aquifex aeolicus VF5]
          Length = 150

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 4/111 (3%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           N VELS+  TD   I  LN  YR  DKPT+VLSFP      +     +LGD+V++ +  E
Sbjct: 39  NNVELSVYITDDQEIRELNKTYRKKDKPTDVLSFPMG---EEFGGYKILGDVVISQDTAE 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDL 162
            +A  LG   E  +  LI+HG +HLLGYDH    ++      LE  +L  L
Sbjct: 96  RQARELGHSLEEEVKRLIVHGIVHLLGYDHEKGGEEEKKFRELENYVLSKL 146


>gi|238927459|ref|ZP_04659219.1| metal-dependent hydrolase [Selenomonas flueggei ATCC 43531]
 gi|238884741|gb|EEQ48379.1| metal-dependent hydrolase [Selenomonas flueggei ATCC 43531]
          Length = 153

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 9/157 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++IA+      D + +         +AV   ++ G        E+S+  T+   I  LN 
Sbjct: 1   MEIAI--GKEPDTLEVPQEDVDAVRRAV---LTVGRLYGALDAEVSVTLTNDAHIHVLNR 55

Query: 73  EYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +YRG+D+PT+VLSF    +      D    ++LGD+V++ E    +A   G  F   L  
Sbjct: 56  DYRGVDRPTDVLSFALTESEEPEIIDAPCGVVLGDLVISLERAAAQAEEYGHSFLRELSF 115

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L +HG LHLLGYDH+++++   ME  +R +++ LGI 
Sbjct: 116 LTVHGMLHLLGYDHIEEEERLEMEEEQRHVMDALGIA 152


>gi|254411860|ref|ZP_05025636.1| conserved hypothetical protein TIGR00043, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181582|gb|EDX76570.1| conserved hypothetical protein TIGR00043, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 169

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F++ +  L         +  EL+L  TD   I+ LN ++R  ++PT+VLSF     
Sbjct: 28  WEHWFSQWLETLHPDNPPAPTH--ELTLRLTDDAEIQALNSQFRHKNQPTDVLSFAALEV 85

Query: 92  SSDGCSSLM-------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
            S      M       LGD+V++ E    +A   G      L  L  HG LHLLG+DH D
Sbjct: 86  DSPQIPPDMQAAESVYLGDLVISVETAYRQAQHQGHPLSIELAWLATHGLLHLLGWDHPD 145

Query: 145 DKDACVMEGLERSILEDLGINDP 167
           ++    M   ++++L+ + +  P
Sbjct: 146 EESLQRMLNQQQALLQIVNLTLP 168


>gi|117927998|ref|YP_872549.1| putative metalloprotease [Acidothermus cellulolyticus 11B]
 gi|145558839|sp|A0LT03|RRMF_ACIC1 RecName: Full=Probable rRNA maturation factor
 gi|117648461|gb|ABK52563.1| protein of unknown function UPF0054 [Acidothermus cellulolyticus
           11B]
          Length = 164

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +  DE+ L  L   V  +               + ELS++  D   +  L
Sbjct: 1   MTVEIANESGVDVDELRLLDLARYVLDRM----------RIHPLAELSILLVDEGEMAVL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF--------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           +  +     PT+VLSFP                    +LGD+VL   + + +A   G   
Sbjct: 51  HERWMDEPGPTDVLSFPMDELRPGRLDVEIDPDAEPAVLGDVVLCPAVAKQQARHAGHST 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           ++ L  L +HG LHLLGYDH ++     M  L+  +L   
Sbjct: 111 QDELELLTVHGILHLLGYDHAEEDAEREMFALQSELLTAW 150


>gi|310659081|ref|YP_003936802.1| yqfg [Clostridium sticklandii DSM 519]
 gi|308825859|emb|CBH21897.1| YqfG [Clostridium sticklandii]
          Length = 157

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 14/161 (8%)

Query: 13  LQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           LQ+  EN + +     L  + E V  K++              VE+SL FT    I+ +N
Sbjct: 2   LQLLFENDSNYIPANDLLKMLESVMLKSLE------LEGVAKEVEISLTFTTDELIKEIN 55

Query: 72  FEYRGIDKPTNVLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            ++R IDK T+VLSFP                  + LGDIV++ E    +A   G  FE 
Sbjct: 56  SKHRNIDKATDVLSFPMYEKQELSDINTSISNFPVALGDIVVSVERTFSQAEEYGHSFER 115

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            +  L+ H   HLLGYDH+  ++  +M   +  +LE LGIN
Sbjct: 116 EMAFLVCHSMFHLLGYDHMTKQEEGLMMEKQNKVLEALGIN 156


>gi|256396155|ref|YP_003117719.1| hypothetical protein Caci_7048 [Catenulispora acidiphila DSM 44928]
 gi|256362381|gb|ACU75878.1| protein of unknown function UPF0054 [Catenulispora acidiphila DSM
           44928]
          Length = 159

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 12/158 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + IA E   +G E  +     V  A+ V      G      + ELS++  D+  +E L
Sbjct: 1   MSIDIANETD-YGTEQGVDAEELVGVARYV-----LGEMGIHPMAELSILLVDTAAMEQL 54

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + ++     PT+VLSFP            +     +LGD+VL  E+ E +    G     
Sbjct: 55  HIQWMDEPGPTDVLSFPMDELRPARAEDDNEPVPGLLGDVVLCPEVAERQGKDAGHSTAE 114

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L  HG LHLLGYDH + ++   M GL++ +L   
Sbjct: 115 ELRLLTTHGILHLLGYDHAEPEEEAEMFGLQKQLLRGW 152


>gi|311895962|dbj|BAJ28370.1| putative metallopeptidase [Kitasatospora setae KM-6054]
          Length = 164

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + IA E+    DE  +  +      K                 ELS++  DS  +  L
Sbjct: 1   MSIDIANESGWDVDEESILDVARYALDKM----------RIHPQSELSVILYDSESMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIE--ANVLGKEFEN 124
           + ++  +  PT+V+SFP          +     +LGDIVL  E+ + +  A       + 
Sbjct: 51  HVQWMDLPGPTDVMSFPMDELRPGKEGEDLPEGLLGDIVLCPEVAKEQGLAAPTKHSMDE 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LH+LGYDH +  +   M  L++ IL+D 
Sbjct: 111 ELQLLTVHGVLHVLGYDHEEPDEEREMFALQKRILDDW 148


>gi|34763927|ref|ZP_00144826.1| Hypothetical Metal-Binding Protein [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886298|gb|EAA23575.1| Hypothetical Metal-Binding Protein [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 162

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 1/127 (0%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  ++       +  + LSL+ TD+  I+ +N EYR  + PT+V+SF             
Sbjct: 33  IKKVLELEEVESDRPLYLSLLLTDNENIQVINREYRDKNAPTDVISFAYHETEDFNIGPY 92

Query: 100 M-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LGDI+++ E +E +A      FE    +++ HG LH+LGYDH+++ D  +M   E +I
Sbjct: 93  DTLGDIIISLERVEEQATEYNHLFEREFYYVLTHGILHILGYDHIEEDDKKLMREREEAI 152

Query: 159 LEDLGIN 165
           L   G  
Sbjct: 153 LSSFGYT 159


>gi|227524437|ref|ZP_03954486.1| metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290]
 gi|227088396|gb|EEI23708.1| metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290]
          Length = 161

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 19/167 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL+I  +      E   + + +V+         +  Y    +  E+S+   +++ I  +
Sbjct: 1   MDLEIYDKTEKGISEKDEKLIRDVLN-------FAGSYIHLADNTEMSVTLVNNNEIHKI 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM------------LGDIVLAYEIIEIEANVL 118
           N EYRG+D+ T+V+SF     + D    ++            +GDI ++ + +  +A+ L
Sbjct: 54  NREYRGVDRATDVISFAIEDEAEDDDFPIVMDEDMQESIPENIGDIFVSVDKVAEQADYL 113

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G  F+  L  L++HGFLHL GYDH++  DA +M  L+  IL   G+ 
Sbjct: 114 GHSFQRELGFLVVHGFLHLNGYDHMEKADADIMFPLQEEILNAYGLK 160


>gi|290960550|ref|YP_003491732.1| hypothetical protein SCAB_61701 [Streptomyces scabiei 87.22]
 gi|260650076|emb|CBG73192.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 165

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +      +   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALTRMRIHPLS----------ELSVIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVL--GKEFE 123
           + ++  +  PT+V+SFP           D     +LGDIVL  E+ E +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPSKDDDEPPQGLLGDIVLCPEVAEKQGKDADTQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  L +HG LHLLGYDH +  +   M GL+ +I++  
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGW 149


>gi|157826181|ref|YP_001493901.1| putative metalloprotease [Rickettsia akari str. Hartford]
 gi|166229073|sp|A8GPR8|RRMF_RICAH RecName: Full=Probable rRNA maturation factor
 gi|157800139|gb|ABV75393.1| hypothetical protein A1C_05790 [Rickettsia akari str. Hartford]
          Length = 167

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 14/170 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIE 68
            ++++I      W +    + + + +  K   N++ +   F K    ELS++ T++  I 
Sbjct: 1   MINVEIIKNYDKWREH---KQINKSLIQKITQNILLRFNNFSKIKQFELSMLLTNTAEIL 57

Query: 69  TLNFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           TLN ++R I+K TNVL+FP+                    + LGD+   YE+I  E+   
Sbjct: 58  TLNKQFRNIEKATNVLAFPSNELNWQDLYSKLEFLGDSDYMHLGDVAFCYEVIYNESCEQ 117

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            K FENH +HL+IH  LHL+G+DH +D +A +ME LE  IL   GI+ PY
Sbjct: 118 QKTFENHFIHLLIHSILHLIGFDHQNDTEAHIMENLEIEILSYFGISSPY 167


>gi|289642692|ref|ZP_06474832.1| protein of unknown function UPF0054 [Frankia symbiont of Datisca
           glomerata]
 gi|289507522|gb|EFD28481.1| protein of unknown function UPF0054 [Frankia symbiont of Datisca
           glomerata]
          Length = 158

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +A E+ +  DE+ L  L   V      N           + ELS++  +   +E L+  Y
Sbjct: 5   VANESGVEADEVTLTALARFVLDTMKVN----------PLAELSVMLVEQAAMEELHVRY 54

Query: 75  RGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
            G + PT+VL+FP           S +   +L+LGDIVL  E+   +A   G   E+ + 
Sbjct: 55  MGEEGPTDVLAFPQDDAFDPSAPDSGEDDPTLLLGDIVLCPEVARRQAAKAGHSTEHEMH 114

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  HG LHLLGYDH +  +   M  ++  +L   
Sbjct: 115 LLCTHGILHLLGYDHAEPDEEREMWAVQSRLLTSW 149


>gi|220928028|ref|YP_002504937.1| hypothetical protein Ccel_0576 [Clostridium cellulolyticum H10]
 gi|219998356|gb|ACL74957.1| protein of unknown function UPF0054 [Clostridium cellulolyticum
           H10]
          Length = 161

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 15/162 (9%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +EN    +++ +    E +  K +   +       +   E++++  D   I  +N E+
Sbjct: 2   IIIENEQ--NKVIVDKKIESLIEKTIK--LCMKSEKLDKDYEVNVLIVDDEEIRGINKEH 57

Query: 75  RGIDKPTNVLSFPT-----------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           R  DK T+VLSFP                      L+LGDI+++ E  + +A   G  FE
Sbjct: 58  RDTDKSTDVLSFPMVNFKDGKLISDEGDYDLEMGELILGDIIISAETAQRQAEAYGHSFE 117

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             +  L  H   HLLGYDH++  +  +M   +  IL ++G+ 
Sbjct: 118 REMAFLTAHSCFHLLGYDHMEKNEEEIMFKKQEDILIEIGLP 159


>gi|227498625|ref|ZP_03928769.1| cytidine deaminase [Acidaminococcus sp. D21]
 gi|226904081|gb|EEH89999.1| cytidine deaminase [Acidaminococcus sp. D21]
          Length = 160

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 7/147 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           +++ +    E    KA++ +        +   E+ +   D   I  LN  YRGID+PT+V
Sbjct: 10  EKVSIPEALEADLTKAMNVVAELEALSPQ--TEVDITLVDDAAIHELNRTYRGIDRPTDV 67

Query: 84  LSFPTAFASSDGCSSL-----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           LSF       +          +LGD++++      +    G   E  + +L +HG LHLL
Sbjct: 68  LSFALDEGEEEPEVDDDEIEHLLGDVIISAPTAVRQGEEYGHGLEREMTYLAVHGMLHLL 127

Query: 139 GYDHVDDKDACVMEGLERSILEDLGIN 165
           GYDH+++KD  +M   E  +L  L + 
Sbjct: 128 GYDHMEEKDKLIMRKREEEVLRRLDLA 154


>gi|239979364|ref|ZP_04701888.1| putative metalloprotease [Streptomyces albus J1074]
 gi|291451239|ref|ZP_06590629.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291354188|gb|EFE81090.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 165

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D   +E L
Sbjct: 1   MSIDVNNESGTEVDERAILDIARYALARMRIHPLS----------ELSVIVVDPEAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  ++   +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPVKDEEEPPQGLLGDIVLCPDVARQQGQDAPTQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+++I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPGEKAEMFGLQQAIVDGWREENGLTGP 158


>gi|291459261|ref|ZP_06598651.1| putative metalloprotease [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418515|gb|EFE92234.1| putative metalloprotease [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 165

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  +  E  L    E +  +    +I   Y       E+S++FTD+  I  +N + RGID
Sbjct: 4   NLDFETEKRLELPLEEIITEICGAVI--AYEHCPFSCEISVLFTDNEGIRAINRDSRGID 61

Query: 79  KPTNVLSFPTAFASSDG----------------CSSLMLGDIVLAYEIIEIEANVLGKEF 122
            PT+VLSFP A     G                     LGDIVL  + IE +A   G   
Sbjct: 62  APTDVLSFPMAEYKRPGDFSIFREGDPELFNPDTGDFFLGDIVLNLDRIESQAREYGHSE 121

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              L  L  H  LHL GYDH+ + +   ME  +R ILE  G 
Sbjct: 122 RRELAFLTAHSMLHLFGYDHMAEGERSEMERRQREILEGKGY 163


>gi|257126606|ref|YP_003164720.1| hypothetical protein Lebu_1864 [Leptotrichia buccalis C-1013-b]
 gi|257050545|gb|ACV39729.1| protein of unknown function UPF0054 [Leptotrichia buccalis
           C-1013-b]
          Length = 153

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 8/158 (5%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVE--LSLVFTDSHRI 67
            LD+ I      +  E       E    + V  ++   Y  + +  E  LSL+ T + +I
Sbjct: 1   MLDIDIT-----YDIEKIDNFFDEEKIKEFVGYILKDEYKEEFDKNEYYLSLLITTNEQI 55

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           + +N EYR  D PT+V+SF      + G  + MLGDIV++ E ++ +++  G   E    
Sbjct: 56  QEINCEYRQKDAPTDVISFAYNETENFGAVN-MLGDIVISIERVKEQSSEYGHSDEREFY 114

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +++ HG LHLLGYDH++++D  VM   E  IL      
Sbjct: 115 YVLCHGMLHLLGYDHIEEQDKVVMRKREEEILSKFNYK 152


>gi|293376336|ref|ZP_06622573.1| metalloprotein, YbeY family [Turicibacter sanguinis PC909]
 gi|325843425|ref|ZP_08167983.1| translation metalloprotein YbeY [Turicibacter sp. HGF1]
 gi|292645025|gb|EFF63098.1| metalloprotein, YbeY family [Turicibacter sanguinis PC909]
 gi|325489347|gb|EGC91721.1| translation metalloprotein YbeY [Turicibacter sp. HGF1]
          Length = 157

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +AV+   +          E +  + V   + +     E  +E S +F D+ +I  +N  Y
Sbjct: 1   MAVDIQFYNQTDEAVERYEQMIERVVVETLKQENLAHE-FIECSFIFVDNEQIREINANY 59

Query: 75  RGIDKPTNVLSFPTAFASSDGC------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           R  D  T+V++F     +             MLGD+ ++      +A   G  F+  L  
Sbjct: 60  RQKDAVTDVITFAIEDETPGEIKIQGVPMPRMLGDVFISLPRTREQAERFGHSFDRELSF 119

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           L +HG LHLLGYDH+  ++  +M   +  +L  LGI
Sbjct: 120 LAVHGCLHLLGYDHLVKEEEEIMFAKQEDVLNALGI 155


>gi|255262455|ref|ZP_05341797.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
 gi|255104790|gb|EET47464.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
          Length = 163

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 20/170 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +++ +++A W   +    L         ++ +     +  ++  +S++  D  RI+ LN 
Sbjct: 2   IEVQIDDARW---VGFEALASRA-----ADAVFDAVGLDRDVWLVSVLACDDARIQVLNA 53

Query: 73  EYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           ++R  D  TNVLS+P                  D      LGD+ ++++    EA     
Sbjct: 54  DFREKDGATNVLSWPAQDLAAVGAGDKPDAPVPDPMGESELGDVAISFDTCAREAAEAAC 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           +F++H+ HL+IHG LHLLGYDH+ D DA +ME LE  IL  LG+ DPY V
Sbjct: 114 DFDDHVAHLMIHGTLHLLGYDHIRDADATLMETLEVQILGKLGLCDPYTV 163


>gi|302391406|ref|YP_003827226.1| hypothetical protein Acear_0619 [Acetohalobium arabaticum DSM 5501]
 gi|302203483|gb|ADL12161.1| protein of unknown function UPF0054 [Acetohalobium arabaticum DSM
           5501]
          Length = 141

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+   D+  I+ LN EYRG+D+PT+VLSFP            MLGDI+++ E  E +A
Sbjct: 39  EVSIALVDNEYIKELNAEYRGLDEPTDVLSFPLGEE--------MLGDIIISLERAESQA 90

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                  +  +  L +HG LHLLGYDH +++    M   E  +L  L + 
Sbjct: 91  EEYNHSLDREMGFLTVHGMLHLLGYDHKEEEAKEEMRNREEKVLNKLDLE 140


>gi|160947548|ref|ZP_02094715.1| hypothetical protein PEPMIC_01483 [Parvimonas micra ATCC 33270]
 gi|158446682|gb|EDP23677.1| hypothetical protein PEPMIC_01483 [Parvimonas micra ATCC 33270]
          Length = 156

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 2/144 (1%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVS--NLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           N  + D   +  + + +  K +       K    + + +E+S+ F  +  I+ +N  +R 
Sbjct: 2   NVFFDDRQDIFVISDTLKKKIIKCIETALKVENKRMSNIEVSVSFVTNEEIKNINSRFRN 61

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           IDK T+VLSFP  F  S+     +LGDI+++ E    +A   G   +  +++L+ H   H
Sbjct: 62  IDKETDVLSFPMDFEFSEEGMPFILGDIIISTEKSIEQAQEFGHSIDREILYLVCHSVFH 121

Query: 137 LLGYDHVDDKDACVMEGLERSILE 160
           LLGYDH+++ D  +M   E+  ++
Sbjct: 122 LLGYDHIEESDRIIMRNKEKETMK 145


>gi|302528837|ref|ZP_07281179.1| metal-dependent hydrolase [Streptomyces sp. AA4]
 gi|302437732|gb|EFL09548.1| metal-dependent hydrolase [Streptomyces sp. AA4]
          Length = 183

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +  DE  + +       K   +           + ELS++      +E L
Sbjct: 1   MSIEIANESGVDVDEASIVSAARYTLEKMEVS----------PLAELSILCVTLEVMEDL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V++FP           +   S  +LGDIVL     + +A   G    +
Sbjct: 51  HERWMDLPGPTDVMAFPMDELDSSRRPDAPDSSPALLGDIVLCPAFAKDQAKTAGHRLID 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M GL++ IL + 
Sbjct: 111 ELHLLTVHGCLHLLGYDHAEPAEEREMFGLQKRILGEF 148


>gi|320010900|gb|ADW05750.1| protein of unknown function UPF0054 [Streptomyces flavogriseus ATCC
           33331]
          Length = 165

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDTAAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEAN--VLGKEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAKKQGEDAETQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAAMFGLQAAIVDGWRGERGLTGP 158


>gi|282882469|ref|ZP_06291090.1| putative metalloprotease [Peptoniphilus lacrimalis 315-B]
 gi|281297611|gb|EFA90086.1| putative metalloprotease [Peptoniphilus lacrimalis 315-B]
          Length = 146

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+ F D + I+ LN +YR +DK T+VLSFP      D     +LGDIV+    +  +A 
Sbjct: 40  VSVSFVDDNEIKNLNRDYRNVDKVTDVLSFPMDEEYEDKI---ILGDIVINMARVLSQAK 96

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             G      L +L +H  LHLLGYDH++++D  +M   E+ I++ L I
Sbjct: 97  EFGHSNRRELSYLCVHSTLHLLGYDHIEEEDRIIMRAKEKEIMDKLKI 144


>gi|210612672|ref|ZP_03289420.1| hypothetical protein CLONEX_01622 [Clostridium nexile DSM 1787]
 gi|210151474|gb|EEA82482.1| hypothetical protein CLONEX_01622 [Clostridium nexile DSM 1787]
          Length = 164

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 17/154 (11%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L   CE +  K +   +   Y       E++L+ T +  I+ +N  +RGID+ T+VLS
Sbjct: 11  LKLSLPCEELAVKVIEMALD--YAKCPYEAEVNLLLTMNDEIQEMNRNFRGIDRATDVLS 68

Query: 86  FPTAFAS---------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           FP                    +     LMLGDIV++ E +  +A   G   E     LI
Sbjct: 69  FPMVDYETAGSFSFLEDALEYFNPESGELMLGDIVISKEKVVSQAEEYGHSIEREYAFLI 128

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            H  LHL G+DH+++++  VME  +  ILE L I
Sbjct: 129 AHSMLHLFGFDHMEEEERAVMERKQAEILERLQI 162


>gi|300813825|ref|ZP_07094130.1| translation metalloprotein YbeY [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512012|gb|EFK39207.1| translation metalloprotein YbeY [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 146

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 3/113 (2%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           +    +S+ F D + I+ LN +YR +DK T+VLSFP      D     +LGDIV+    +
Sbjct: 35  DKEYYVSVSFVDDNEIKNLNRDYRNVDKVTDVLSFPMDEEYEDKI---ILGDIVINMARV 91

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +A   G      L +L +H  LHLLGYDH++++D  +M   E+ I++ L I
Sbjct: 92  LSQAKEFGHSNRRELSYLCVHSTLHLLGYDHIEEEDRIIMRAKEKEIMDKLKI 144


>gi|294012045|ref|YP_003545505.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S]
 gi|292675375|dbj|BAI96893.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S]
          Length = 166

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 6/162 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +++AV +     +     L +     A+++     +   E + E+++  T    +  LN 
Sbjct: 2   IEVAVLHEQGWPDTDWELLAQRAVVAAITHSPYAAFAADEALYEVAVKLTTDEEVHQLNR 61

Query: 73  EYRGIDKPTNVLSFPT------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            YR  DKPTNVLSFP          ++     ++LGDIVLA  +   EA   G    +H 
Sbjct: 62  AYRDKDKPTNVLSFPMVQSDLLETTANTDDGEVLLGDIVLAEGVCAREAAEKGVSVADHA 121

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            HLI+HG  HLLGYDH++D +A  ME LE   L  LGI+DPY
Sbjct: 122 THLIVHGTFHLLGYDHMEDAEAEAMEALETQSLISLGISDPY 163


>gi|88811724|ref|ZP_01126978.1| hypothetical protein NB231_04945 [Nitrococcus mobilis Nb-231]
 gi|88791115|gb|EAR22228.1| hypothetical protein NB231_04945 [Nitrococcus mobilis Nb-231]
          Length = 154

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 14/161 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +DLQ+A  N    +                   ++       +  E+++   D      
Sbjct: 3   EIDLQLASCNPDVPELEQFERW------------VAAALAGARDAAEIAIRIVDEEEGRE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  YRG D  TN+L+FP      +G  +++LGD+V+   ++  EA+   K    H  HL
Sbjct: 51  LNAIYRGYDYATNILAFPAEL--PEGVEAVLLGDLVICAPLVAREADEQDKRLAAHWAHL 108

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           ++HG LHLLGYDH ++  A VME  ER IL  LG  DPY  
Sbjct: 109 VVHGVLHLLGYDHEEEAAAAVMEAQERVILAKLGYPDPYAD 149


>gi|332638285|ref|ZP_08417148.1| metal-dependent hydrolase [Weissella cibaria KACC 11862]
          Length = 160

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 18/166 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL I ++ +  G       L E V         +  Y    +  E+S+ F ++  I+  
Sbjct: 1   MDLAI-IDQSKPGVPAEQIELVEKVLD------YAGKYMKLPDDTEMSVTFVNNDEIQRY 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL----------MLGDIVLAYEIIEIEANVLGK 120
           N EYRG+DKPT+V+SF       D    +           +GDI+++ + I  +A  L  
Sbjct: 54  NREYRGLDKPTDVISFAIEEDGDDMPLMMDEDMAEDLAKNIGDIIVSVDKIGEQAEYLEH 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGIN 165
            +E  L  L++HGFLHL GYDH+  D+D  +M  L+R IL+  G+ 
Sbjct: 114 SYERELGFLVVHGFLHLNGYDHMRSDEDEKIMFDLQREILDSYGLT 159


>gi|254382694|ref|ZP_04998051.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194341596|gb|EDX22562.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 165

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+ +  DE  +  +      +   + +S          ELS++  D   +E L
Sbjct: 1   MSIDVNNESGIEVDEQAILDIARYALTRMRIHPLS----------ELSVIVVDEGAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAKKQGEDAPTQHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      GI  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRGERGITGP 158


>gi|295094824|emb|CBK83915.1| conserved hypothetical protein TIGR00043 [Coprococcus sp. ART55/1]
          Length = 170

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 16/144 (11%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-------- 95
            S  +       E++++ TD+  I  +N + R ID+ T+VLSFP    +  G        
Sbjct: 27  ASLEFVGCPYPCEVNVLLTDNDSIHEINNQQRNIDRATDVLSFPLIDYTIPGNFDGLEDS 86

Query: 96  --------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                      L+LGDIV++ + +  +A          L  L+ H  LHL GYDH++D +
Sbjct: 87  RCDYFDLTTDELLLGDIVISIDKVYEQATEYNHSKTRELAFLVAHSMLHLSGYDHMEDDE 146

Query: 148 ACVMEGLERSILEDLGINDPYEVD 171
             VME ++  IL   G    YE +
Sbjct: 147 RRVMEEMQEKILTMKGYTRDYEEN 170


>gi|302380695|ref|ZP_07269160.1| translation metalloprotein YbeY [Finegoldia magna ACS-171-V-Col3]
 gi|303233630|ref|ZP_07320284.1| translation metalloprotein YbeY [Finegoldia magna BVS033A4]
 gi|302311638|gb|EFK93654.1| translation metalloprotein YbeY [Finegoldia magna ACS-171-V-Col3]
 gi|302495064|gb|EFL54816.1| translation metalloprotein YbeY [Finegoldia magna BVS033A4]
          Length = 153

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 5/122 (4%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           + ++  E+SL F     I  LN +YR  D  T+VLSFP          + +LGDI++  +
Sbjct: 34  LNDDNYEISLSFVSEAEIRKLNRDYRDKDSVTDVLSFP--LDDDFAIQTNLLGDIIICCK 91

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
               +A       +  +V+L++H   HLLGYDH+D+ D  +M   E+  L+++GI   Y+
Sbjct: 92  RAIEQAKEYNHSIKREIVYLVVHSMFHLLGYDHIDESDRIIMRNKEKLALKEIGI---YK 148

Query: 170 VD 171
            +
Sbjct: 149 DE 150


>gi|296137315|ref|YP_003644557.1| protein of unknown function UPF0054 [Thiomonas intermedia K12]
 gi|295797437|gb|ADG32227.1| protein of unknown function UPF0054 [Thiomonas intermedia K12]
          Length = 175

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 11/166 (6%)

Query: 9   PRLDLQIAVENALWGDEIH---LRTLCEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDS 64
           P L L +   +    D++    L           + +L +           +++L F  +
Sbjct: 10  PALRLSVQFADTTHRDQLPRALLLRWVRAALRVGLESLDALPQAGASPEAHQITLRFVAA 69

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
                LN  YRG D  TNVL+F       D     +  DIVL   ++  EA    K   +
Sbjct: 70  DEGRALNRAYRGKDYATNVLTF-------DYSHWPVQADIVLCCPVVAGEALAQHKPLGS 122

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           H  HL+IHG LH  G+DH  + +A  ME  E ++L+  GI+DPY  
Sbjct: 123 HYAHLVIHGLLHAQGWDHQTELEAQEMERHEVTVLQRFGISDPYAD 168


>gi|325963343|ref|YP_004241249.1| hypothetical protein Asphe3_19600 [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323469430|gb|ADX73115.1| conserved hypothetical protein TIGR00043 [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 157

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 14/156 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  L  L   +F +   +             ELS++  D   +E L
Sbjct: 1   MSIEVNNESGVQVDEAELVMLSRYIFEQLFIH----------PQAELSILLVDEPAMEKL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + E       T+VLS P                MLGDI +  ++ +++A   G   ++ +
Sbjct: 51  HIELMDEPGSTDVLSVPMDELTPGTPDRPTPQGMLGDIAICPQVAQMQAKNAGHTLQDEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L  HG LHLLGYDH + ++   M GL+R +L   
Sbjct: 111 LLLTTHGILHLLGYDHAEPEEKAEMFGLQRELLSGF 146


>gi|116670778|ref|YP_831711.1| putative metalloprotease [Arthrobacter sp. FB24]
 gi|145572771|sp|A0JX41|RRMF_ARTS2 RecName: Full=Probable rRNA maturation factor
 gi|116610887|gb|ABK03611.1| protein of unknown function UPF0054 [Arthrobacter sp. FB24]
          Length = 157

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 14/156 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  L  L   VF +                 ELS++  D   +E L
Sbjct: 1   MSIEVNNESGVTVDEAQLVALARFVFER----------LYIHPQAELSILLVDEPAMEKL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + E       T+VLS P                MLGDI +  ++ E++A   G   ++ +
Sbjct: 51  HLELMDEPGATDVLSVPMDELTPGTPDKPTPQGMLGDIAVCPQVAEVQARNAGHSTQDEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L  HG LHLLGYDH D ++   M GL+R +LE  
Sbjct: 111 LLLTTHGILHLLGYDHADPEEKEEMFGLQRELLEGF 146


>gi|227514587|ref|ZP_03944636.1| metal-dependent hydrolase [Lactobacillus fermentum ATCC 14931]
 gi|227086998|gb|EEI22310.1| metal-dependent hydrolase [Lactobacillus fermentum ATCC 14931]
          Length = 157

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 10/149 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E  L+   E +  KA++   +          E+SL F  +  I  LN +YRGID+ T+V+
Sbjct: 10  EGKLQPSQERLAEKALAQ--AAERLDVPEQAEMSLTFVLNPEIRELNRDYRGIDRATDVI 67

Query: 85  SFPTAFASS--------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           SF                    + LGD+V++ + +  +A  L    +  L +L++HGFLH
Sbjct: 68  SFAIEDDDDLANLPAEIRAELPVELGDLVISIDKVTEQALFLNHSADRELGYLLVHGFLH 127

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L GYDH +  D   M  L+  IL+ LG++
Sbjct: 128 LNGYDHEEPADEKKMFTLQEEILDGLGLS 156


>gi|111221447|ref|YP_712241.1| putative metalloprotease [Frankia alni ACN14a]
 gi|122954432|sp|Q0RP74|RRMF_FRAAA RecName: Full=Probable rRNA maturation factor
 gi|111148979|emb|CAJ60659.1| conserved hypothetical protein [Frankia alni ACN14a]
          Length = 181

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 18/156 (11%)

Query: 15  IAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +A E+     DE+ L  L   V      N           + ELS++  +   +  L+  
Sbjct: 5   VANESGANDVDEVRLTALARFVLDAMKVN----------PLAELSVMLVEEKAMADLHVR 54

Query: 74  YRGIDKPTNVLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           Y G + PT+VLSF    A         D   + +LGD+VL  ++   +A   G   E  L
Sbjct: 55  YMGEEGPTDVLSFAQDDAFDASWSESVDDDPTTLLGDVVLCPDVARRQAEQAGHSHEREL 114

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  HG LHLLGYDH +  +   M  ++  +L   
Sbjct: 115 HLLCTHGILHLLGYDHAEPDEEREMWKIQNKLLASW 150


>gi|86739975|ref|YP_480375.1| putative metalloprotease [Frankia sp. CcI3]
 gi|123765131|sp|Q2JDJ6|RRMF_FRASC RecName: Full=Probable rRNA maturation factor
 gi|86566837|gb|ABD10646.1| protein of unknown function UPF0054 [Frankia sp. CcI3]
          Length = 201

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 18/156 (11%)

Query: 15  IAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +A E+     DE+ L  L   V      N           + ELS++  +   +  L+  
Sbjct: 5   VANESGASDVDEVRLAALARFVLDAMKVN----------PLAELSVMLVEPKAMTDLHVR 54

Query: 74  YRGIDKPTNVLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           Y G + PT+VLSFP   A         D   + +LGD+VL  ++   +A   G  F+  L
Sbjct: 55  YMGEEGPTDVLSFPQDDAFDASWSESVDDDPTTLLGDVVLCPDVARRQAEQAGHSFDREL 114

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  HG LHLLGYDH +  +   M  ++  +L   
Sbjct: 115 SLLCTHGILHLLGYDHAEPDEEREMWKVQSQLLASW 150


>gi|158320283|ref|YP_001512790.1| hypothetical protein Clos_1248 [Alkaliphilus oremlandii OhILAs]
 gi|166977843|sp|A8MG66|RRMF_ALKOO RecName: Full=Probable rRNA maturation factor
 gi|158140482|gb|ABW18794.1| protein of unknown function UPF0054 [Alkaliphilus oremlandii
           OhILAs]
          Length = 151

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 5/153 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +++ ++N     EI    L E++     + LI +G+   E   E+SL F D+  I+ LN 
Sbjct: 1   MELLIDNRQDRYEIT-DALIELINKAVEACLIYEGW---EIDYEVSLSFVDNQEIQALNH 56

Query: 73  EYRGIDKPTNVLSFPTAFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
            YRG D  T+VLSFP    +        +LGDIV++ E    +A      FE  +  L++
Sbjct: 57  TYRGKDYATDVLSFPLIEENQGLDLEEKLLGDIVISVEKAAEQAKEYNHSFEREMGFLVV 116

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           H   HL+GYDH  D+    M   E ++L  + +
Sbjct: 117 HSMFHLMGYDHDHDEATADMRKREEAVLTAINL 149


>gi|226325256|ref|ZP_03800774.1| hypothetical protein COPCOM_03048 [Coprococcus comes ATCC 27758]
 gi|225206604|gb|EEG88958.1| hypothetical protein COPCOM_03048 [Coprococcus comes ATCC 27758]
          Length = 164

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 17/155 (10%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L+   E +  K    ++       E  VEL  + T +  I  +N E+RGID+ T+VLS
Sbjct: 11  LDLKLPYEELATKVADAVLDYEKCPYEAQVEL--LLTMNEEIRQMNLEFRGIDRATDVLS 68

Query: 86  FPTAFAS---------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           FP                          LMLG+IV++ E  + +A   G   E     LI
Sbjct: 69  FPMTEFPSPADYAYLDTDDSSFDPETGELMLGNIVISKERAKEQAEEYGHSVEREFAFLI 128

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            H  LHLLGYDH++D++  VME  +R +LE LGI 
Sbjct: 129 AHSMLHLLGYDHMEDEERLVMEKKQREVLEMLGIT 163


>gi|169824430|ref|YP_001692041.1| putative metal-dependent hydrolase [Finegoldia magna ATCC 29328]
 gi|238687740|sp|B0S1B1|RRMF_FINM2 RecName: Full=Probable rRNA maturation factor
 gi|167831235|dbj|BAG08151.1| putative metal-dependent hydrolase [Finegoldia magna ATCC 29328]
          Length = 153

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +QI+     +  +  L +  E          I     + ++  E+SL F     I  L
Sbjct: 1   MIIQISNRQEDFQIDDELTSDIEKSIR------ICLLQELNDDNYEISLSFVSESEIRKL 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YR  D  T+VLSFP          + +LGDI++  +    +A       +  +V+L+
Sbjct: 55  NSDYRDKDSVTDVLSFP--LDDDFAIQTNLLGDIIICCKRAIEQAKEYNHSIKREIVYLV 112

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           +H   HLLGYDH+D+ D  +M   E+S L+++GI   Y+ +
Sbjct: 113 VHSMFHLLGYDHIDESDRIIMRNKEKSALKEIGI---YKDE 150


>gi|255291932|dbj|BAH90420.1| hypothetical protein [uncultured bacterium]
          Length = 155

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 7/130 (5%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           V+  +      +    E+++          LN ++R  D  TNVL+F  + A       L
Sbjct: 30  VARWLRAALGEQVQAAEITVRIVGDDEGRQLNRDFRARDYATNVLTFDYSGA------PL 83

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSI 158
           +  D+VL   ++  EA   GK   +H  HL++HG LH  G++H   D+DA  ME  E ++
Sbjct: 84  VAADLVLCAPVVAREAAEQGKPLADHYAHLLVHGALHAQGWEHETSDEDAEAMEAHESAV 143

Query: 159 LEDLGINDPY 168
           L  LG+ DPY
Sbjct: 144 LTGLGLPDPY 153


>gi|269794667|ref|YP_003314122.1| hypothetical protein Sked_13480 [Sanguibacter keddieii DSM 10542]
 gi|269096852|gb|ACZ21288.1| conserved hypothetical protein TIGR00043 [Sanguibacter keddieii DSM
           10542]
          Length = 153

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+    DE     L   V  +   +          +  ELS++F  +  +  L
Sbjct: 1   MSIEVNNESGYEVDEAEFAALGRFVLDEMHVH----------SQTELSILFVGTEVMSEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++     PT+VLSFP          +   + +LGD+V+  E+  I+A   G      +
Sbjct: 51  HVQWMDEPGPTDVLSFPMDELRPGREGEVTPAGLLGDVVVCPEVAAIQAQGAGHSTVEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLGYDH + ++   M GL+R +L
Sbjct: 111 LLLTTHGILHLLGYDHAEPEEEKEMFGLQRRLL 143


>gi|297520691|ref|ZP_06939077.1| putative metalloprotease [Escherichia coli OP50]
          Length = 107

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 2/107 (1%)

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
               +LN  YRG DKPTNVLSFP  F    G    +LGD+V+  +++E EA   GK  E 
Sbjct: 1   AESHSLNLTYRGKDKPTNVLSFP--FEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEA 58

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           H  H+++HG LHLLGYDH++D +A  ME LE  I+  LG  DPY  +
Sbjct: 59  HWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAE 105


>gi|159899181|ref|YP_001545428.1| hypothetical protein Haur_2662 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892220|gb|ABX05300.1| protein of unknown function UPF0054 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 174

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 20/154 (12%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF--- 86
            L   +  + V+ +++     +    E+ +  T+   +  LN +YRG+D+PT+VLSF   
Sbjct: 16  ALDTSLLEQVVAQVLADEG--QTGTWEIGIRITNDQELHELNRQYRGVDRPTDVLSFGEY 73

Query: 87  ---------------PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
                             F   +   +  LGD+ ++YE +  +A          L +L+ 
Sbjct: 74  EDDDDDFIVPDGVYDDDEFDDPEADEAAYLGDLAISYERVLAQAQEYAHSSRRELCYLVA 133

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HG LHLLGYDH  D++   M   E   L  LGI 
Sbjct: 134 HGTLHLLGYDHETDEEREDMRQREEKALSTLGIT 167


>gi|311741361|ref|ZP_07715185.1| metalloprotease [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311303531|gb|EFQ79610.1| metalloprotease [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 205

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 22/164 (13%)

Query: 11  LDLQIAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + ++   E+   G +E  L  +    F     N             E ++   D   IE 
Sbjct: 1   MSIEFLNESGFEGVNEEMLIDVASYAFGAMDIN----------PDAECTVTCVDLKTIED 50

Query: 70  LNFEYRGIDKPTNVLSFPTAF-----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           L+  +  ++ PT+V+SFP                +      MLGDIVL  E    +A   
Sbjct: 51  LHVRWMDLEGPTDVMSFPMDELTPGAIAGGGRPDAADPGPAMLGDIVLCPEFALRQAEAA 110

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           G    + L  L +HG LHLLGYDH    +   M G +  +L D 
Sbjct: 111 GHSLGHELALLTVHGCLHLLGYDHSTPAEEKEMFGRQNELLADW 154


>gi|297160576|gb|ADI10288.1| putative metalloprotease [Streptomyces bingchenggensis BCW-1]
          Length = 165

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MAIDVNNESGTEIDERAVLDVARYALARMRIHPLS----------ELSVIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAKKQGEEAPTGHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  L +HG LHLLGYDH +  +   M GL+ +I++  
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDERAEMFGLQAAIVDGW 149


>gi|255323734|ref|ZP_05364862.1| putative metalloprotease [Corynebacterium tuberculostearicum SK141]
 gi|255299224|gb|EET78513.1| putative metalloprotease [Corynebacterium tuberculostearicum SK141]
          Length = 205

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 22/164 (13%)

Query: 11  LDLQIAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + ++   E+   G +E  L  +    F     N             E ++   D   IE 
Sbjct: 1   MSIEFLNESGFEGVNEEMLIDVASYAFGAMDIN----------PDAECTITCVDLKTIED 50

Query: 70  LNFEYRGIDKPTNVLSFPTAF-----------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           L+  +  ++ PT+V+SFP                +      MLGDIVL  E    +A   
Sbjct: 51  LHVRWMDLEGPTDVMSFPMDELTPGAIAGGGRPDAADPGPAMLGDIVLCPEFALRQAEAA 110

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           G    + L  L +HG LHLLGYDH    +   M G +  +L D 
Sbjct: 111 GHSLGHELALLTVHGCLHLLGYDHSTPAEEKEMFGRQNELLADW 154


>gi|91789935|ref|YP_550887.1| hypothetical protein Bpro_4096 [Polaromonas sp. JS666]
 gi|123164394|sp|Q124Q3|RRMF_POLSJ RecName: Full=Probable rRNA maturation factor
 gi|91699160|gb|ABE45989.1| protein of unknown function UPF0054 [Polaromonas sp. JS666]
          Length = 154

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 15/164 (9%)

Query: 7   NLPRLDLQIAVENALWGDEI-HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++P   L ++++   +     H   L      + +S+ +       +   E+++   D+ 
Sbjct: 4   DVPLRQLDLSLQFGQFPGVARHRAALPRRRVQRWISHAL-------KTDAEITVRIVDAE 56

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
             ++LN +YR  D  TNVL+F            ++  D+VL   ++E EA   GK  E H
Sbjct: 57  EGQSLNRDYRRKDYATNVLTFDYTR------EPVVTADLVLCAPVVEREAREQGKTLEAH 110

Query: 126 LVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDLGINDPY 168
             HL++H  LH  GYDH  ++ DA  ME LE  +L  L   +PY
Sbjct: 111 YAHLLVHATLHAQGYDHETNERDALEMEALEILLLASLRFANPY 154


>gi|18311000|ref|NP_562934.1| putative metalloprotease [Clostridium perfringens str. 13]
 gi|26006929|sp|Q8XIU5|RRMF_CLOPE RecName: Full=Probable rRNA maturation factor
 gi|18145682|dbj|BAB81724.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 168

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 17/131 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------------- 94
           +   E+SLVF D+  I  +N E RGIDK T+VLSFP      D                 
Sbjct: 35  KEDCEVSLVFVDNEEIRGINNETRGIDKATDVLSFPMIDYPEDKVYKDVYLEHEFDKCYF 94

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGYDH+++++   M G 
Sbjct: 95  DGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGR 154

Query: 155 ERSILEDLGIN 165
           E  +L  L I 
Sbjct: 155 EEELLGKLNIT 165


>gi|300933262|ref|ZP_07148518.1| putative metalloprotease [Corynebacterium resistens DSM 45100]
          Length = 194

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + +++  E+     +E  L  +                     +  ELS+   D   I  
Sbjct: 1   MSIEVFNESGRGEVNEEELIDVARYALWT----------LDVHSAAELSIHIVDLDTIAD 50

Query: 70  LNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           L+  +  +  PT+V+SFP                S  MLGDI+L  +  E +AN  G   
Sbjct: 51  LHERWLDLPGPTDVMSFPMDELTPGWGRKDGPPPSPAMLGDIMLCPDFAERQANRAGHSL 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            + L  L +HG LHLLG+DH   ++   M  L+  IL + 
Sbjct: 111 AHELDLLTVHGVLHLLGFDHTTPEEEQRMFSLQNEILANW 150


>gi|260436620|ref|ZP_05790590.1| putative metalloprotease [Synechococcus sp. WH 8109]
 gi|260414494|gb|EEX07790.1| putative metalloprotease [Synechococcus sp. WH 8109]
          Length = 172

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 64/164 (39%), Gaps = 12/164 (7%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLI----------SKGYFVKENIVELSL 59
            LDL +  E         +  L E V+ +     +                    + L L
Sbjct: 2   ELDLALDREGVTLQPSDSIDLLDETVWLQQFDRWLNGICGDASLACPPLVRSAEELSLGL 61

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--MLGDIVLAYEIIEIEANV 117
            FTD   I  LN  +R    PT+VLSF     + D        LGDIV++ E    +A  
Sbjct: 62  RFTDDAAIADLNSAWRQKTGPTDVLSFAALDDAGDWMEGPSIELGDIVVSLETARRQAQE 121

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            G      L  L+ HG LHLLG+DH D+     M  L+  +L D
Sbjct: 122 QGHSLNRELRWLVSHGLLHLLGWDHPDEDSLAAMLALQERLLGD 165


>gi|50955089|ref|YP_062377.1| putative metalloprotease [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|59799105|sp|Q6AEC4|RRMF_LEIXX RecName: Full=Probable rRNA maturation factor
 gi|50951571|gb|AAT89272.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 153

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+A+  DE  L+ L    F                   EL+++  D   +E L
Sbjct: 1   MSIEVNNESAIAADEAKLQRLAGYTFD----------IMHVHPDAELAILLVDEAAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++     PT+VLSFP          +   + +LGD+VL  ++ +++A   G    + L
Sbjct: 51  HVQWMDEPGPTDVLSFPMDELRPGTEDEPSPAGLLGDVVLCPQVAQVQAETTGHTLMDEL 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L+ HG LHLLG+DH +  +   M G++R IL
Sbjct: 111 LLLMTHGILHLLGFDHAEPAEEREMFGIQRDIL 143


>gi|332652573|ref|ZP_08418318.1| putative metalloprotease [Ruminococcaceae bacterium D16]
 gi|332517719|gb|EGJ47322.1| putative metalloprotease [Ruminococcaceae bacterium D16]
          Length = 322

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L+ +I +E  + G E +   L +V+ A   +  +           E+ ++FTD   I  +
Sbjct: 162 LNHEIIIETEVDGAEEYADLLRQVIPAALAAEGVDV-------PCEVDVLFTDDEGIHQI 214

Query: 71  NFEYRGIDKPTNVLSFPT----------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N E R +D+PT+VLSFP              +  G + + LGD+V++ E  + +    G 
Sbjct: 215 NLEQREVDRPTDVLSFPMFDLQPGEHPTQEDADPGDNLVPLGDMVISLERAKAQGEEYGH 274

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKD-ACVMEGLERSILEDLGI 164
                + +L +H  LHLLGYDH+D+      M   E  IL  LGI
Sbjct: 275 GTRREVAYLAVHSVLHLLGYDHMDEGPMKKQMRQREEEILGTLGI 319


>gi|294789474|ref|ZP_06754710.1| putative metalloprotease [Simonsiella muelleri ATCC 29453]
 gi|294482554|gb|EFG30245.1| putative metalloprotease [Simonsiella muelleri ATCC 29453]
          Length = 174

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 5/171 (2%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M  +  + P L +Q   +       I+  +  ++   K     I           E+SLV
Sbjct: 7   MKKQTKHFPFLRIQ---QQRFALSYINESSATDLPTEKQFYQWIWHALKNFYYRAEISLV 63

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVL 118
             D       N +YRG D  TNVLSF              ++ GD+++   ++  EA   
Sbjct: 64  LLDEAAARQYNHDYRGKDYATNVLSFAHNEGEFLFVEQDDVLRGDLIICPRVVAKEATEQ 123

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           GK   +H  HL+IHG LHL+G+DH++D +A  ME LE  +L  L I +PYE
Sbjct: 124 GKALHDHYAHLVIHGTLHLIGFDHMEDDEAEEMENLETELLAQLNIVNPYE 174


>gi|302534335|ref|ZP_07286677.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302443230|gb|EFL15046.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 165

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+    DE  +  +      +   + +S          ELS++  D   +E L
Sbjct: 1   MSIDVNNESGTEVDEQAILDIARYALTRMRIHPLS----------ELSVIVIDEDAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + + +        +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAKKQGDEAPTRHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      GI  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAERGITGP 158


>gi|184155314|ref|YP_001843654.1| hypothetical protein LAF_0838 [Lactobacillus fermentum IFO 3956]
 gi|238692971|sp|B2GBZ2|RRMF_LACF3 RecName: Full=Probable rRNA maturation factor
 gi|183226658|dbj|BAG27174.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
          Length = 157

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 10/149 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E  L+   E +  KA++   +          E+SL F  +  I  LN +YRGID+ T+V+
Sbjct: 10  EGKLQPSQERLAEKALAQ--AAERLDVPEQAEMSLTFVLNPEIRELNRDYRGIDRATDVI 67

Query: 85  SFPTAFASS--------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
           SF                    + LGD+V++ + +  +A  L    +  L +L++HGFLH
Sbjct: 68  SFAIEDDDDLANLPAEIRAELPVELGDLVISIDKVTEQALFLNHSADRELGYLLVHGFLH 127

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L GYDH +  D   M  L+  IL+ LG++
Sbjct: 128 LNGYDHEEPADEEKMFTLQEEILDGLGLS 156


>gi|126730911|ref|ZP_01746720.1| hypothetical protein SSE37_13898 [Sagittula stellata E-37]
 gi|126708627|gb|EBA07684.1| hypothetical protein SSE37_13898 [Sagittula stellata E-37]
          Length = 178

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 83/170 (48%), Gaps = 23/170 (13%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           VE+  W                     +++  FV  +  E++++     RI  LN ++RG
Sbjct: 7   VEDDRWEAAGLAALAEAAA-----QETLAQLGFV-ADDYEIAVMGCSDGRIAILNADFRG 60

Query: 77  IDKPTNVLSFPTAFASSDGC-----------------SSLMLGDIVLAYEIIEIEANVLG 119
              PTNVLS+PT   +S                        LGD+ LA+E  E EA    
Sbjct: 61  RPAPTNVLSWPTQELTSPDAGGDPFLPHLDDDFEAMGEPHHLGDLALAWETCEREAAEQD 120

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           K   +H+ HL++HG LHL+GYDH+ D DA +MEGLER IL +LGI DPY 
Sbjct: 121 KSMADHVTHLLVHGVLHLMGYDHIRDADATLMEGLERGILGNLGIADPYR 170


>gi|167465835|ref|ZP_02330924.1| hypothetical protein Plarl_25263 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 150

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 19/128 (14%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS----------------- 98
           E++L F ++  I  LN +YRGID+PT+VLSF       D                     
Sbjct: 21  EVTLTFVNNDMIHELNRQYRGIDRPTDVLSFAMQEMGEDELIISYGELDEDGIEAVLEDK 80

Query: 99  --LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LGDI+++      +A   G  FE  L  L +HGFLHL+GYDH  + +   M   + 
Sbjct: 81  IVEPLGDIIISIPKTIEQAEEYGHSFERELGFLFVHGFLHLVGYDHQTEDEEKKMFAKQE 140

Query: 157 SILEDLGI 164
            IL   G+
Sbjct: 141 LILSQAGL 148


>gi|114567084|ref|YP_754238.1| metal-dependent hydrolase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317921|sp|Q0AWN7|RRMF_SYNWW RecName: Full=Probable rRNA maturation factor
 gi|114338019|gb|ABI68867.1| metal-dependent hydrolase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 156

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 7/132 (5%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           V+N ++K   +  N  ELS++  D+  I+ LN  YRG + PT+VLSF     S +     
Sbjct: 25  VANAVAKMVKLSPN-TELSVMIVDNSYIKELNLIYRGENNPTDVLSFAMNELSEEEMDLD 83

Query: 100 M------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           +      LGDIV++ E    ++   G   E  L +LI HG LHLLGYDH ++++  +M  
Sbjct: 84  LPGEVNVLGDIVVSLEKAVSQSEEYGHSAERELGYLIAHGMLHLLGYDHENEEERNLMRN 143

Query: 154 LERSILEDLGIN 165
           LE  I+  + + 
Sbjct: 144 LEERIMHKVKLE 155


>gi|289548111|ref|YP_003473099.1| hypothetical protein Thal_0337 [Thermocrinis albus DSM 14484]
 gi|289181728|gb|ADC88972.1| protein of unknown function UPF0054 [Thermocrinis albus DSM 14484]
          Length = 161

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 4/117 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VELSL  T    I  LN EYRG DKPT+VLSFP         S  +LGDIV++++  + +
Sbjct: 38  VELSLYITTDQVIRELNREYRGKDKPTDVLSFPIGEKVG---SFTLLGDIVISWDTAKKQ 94

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYEV 170
           A   G   E  +  L +HG +HLLGYDH    ++      LE  +L +L    P+  
Sbjct: 95  AKEYGHSTEEEIKRLALHGLVHLLGYDHELGGEEERKFFSLENYLLSELSHIAPWSW 151


>gi|289423899|ref|ZP_06425692.1| putative metalloprotease [Peptostreptococcus anaerobius 653-L]
 gi|289155676|gb|EFD04348.1| putative metalloprotease [Peptostreptococcus anaerobius 653-L]
          Length = 158

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM--LGDIV 105
           Y   ++  E+SL F D+  I  LN E+R ID+ T+VLSFP            +  LGDIV
Sbjct: 32  YEDYDDNYEVSLSFVDNEEIRNLNREFRNIDRVTDVLSFPMLSDDEFDIEYEVESLGDIV 91

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ +  + +A       E  +  L+ H   HLLGYDH+++++A  M   E  +L  L I 
Sbjct: 92  ISIQRADEQAEEFDHSLEREICFLVCHSMFHLLGYDHMEEEEAKDMHRREEEVLNGLDIT 151


>gi|300788461|ref|YP_003768752.1| metalloprotease [Amycolatopsis mediterranei U32]
 gi|299797975|gb|ADJ48350.1| putative metalloprotease [Amycolatopsis mediterranei U32]
          Length = 190

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +  DE  + +       K   +           + ELS++      +E L
Sbjct: 1   MSIEIANESGVDVDETSIVSAARYALDKMEVS----------PLAELSILLVTLEVMEDL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V++FP           +   S  +LGDIVL     + +A   G    +
Sbjct: 51  HERWMDLPGPTDVMAFPMDELDSSRRPDAPDASPALLGDIVLCPAFAKDQAKTAGHALID 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M  L++ IL + 
Sbjct: 111 ELHLLTVHGVLHLLGYDHAEPAEEREMFALQKRILGEY 148


>gi|168281735|ref|ZP_02689402.1| conserved hypothetical protein [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|182675946|gb|EDT87851.1| conserved hypothetical protein [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
          Length = 155

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 5/136 (3%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            L    F +    + +K    K+   E    F D   I+ +N  YR  D  T+V+SF   
Sbjct: 16  KLYSQRFKQITDLVSTKLNIDKKRFFECH--FVDEKTIQEINRNYRNKDYITDVISFAF- 72

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                   + +LG++ + Y+ +  +AN     FE  L  L  HG LHLLGYDH+  +D  
Sbjct: 73  --DDGEIITPLLGEMYICYQKVVDQANQFAHSFERELCFLFTHGLLHLLGYDHMKIEDEK 130

Query: 150 VMEGLERSILEDLGIN 165
           +M  L+  IL +L I 
Sbjct: 131 IMFALQDEILNELKIT 146


>gi|260587672|ref|ZP_05853585.1| putative metalloprotease [Blautia hansenii DSM 20583]
 gi|331084038|ref|ZP_08333145.1| hypothetical protein HMPREF0992_02069 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541937|gb|EEX22506.1| putative metalloprotease [Blautia hansenii DSM 20583]
 gi|330402400|gb|EGG81970.1| hypothetical protein HMPREF0992_02069 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 164

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 17/156 (10%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E +L    E +  K +   +   Y       E++LV T +  I+  N E+R ID+ T+VL
Sbjct: 10  EENLDFDYEELAKKVIEAALD--YEGCPYETEINLVLTGNEEIQQTNREFRNIDRVTDVL 67

Query: 85  SFPTAF---------ASSDGC------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           SFP            A  D          L+LGDI++    ++ +A   G         L
Sbjct: 68  SFPMLDFTAPADFSVAEEDDTCFHPESGELILGDIMICIPRMQEQAESYGHGQIREFAFL 127

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           I H  LHL+GYDH++ ++A  ME  +  IL  LGI 
Sbjct: 128 IAHSMLHLMGYDHMEPEEAKEMERKQEEILASLGIT 163


>gi|291279469|ref|YP_003496304.1| hypothetical protein DEFDS_1079 [Deferribacter desulfuricans SSM1]
 gi|290754171|dbj|BAI80548.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 154

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 13/153 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +L++ I  +N +   +     + E+VF +    L         +  E+SL+ T+S  I+ 
Sbjct: 6   KLNILINKKNPVQVSDDFFYKVSELVFEQINYPL---------SEAEISLLLTNSEEIKI 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  D PT+VLSFP      +     +LGDIV+  + +E  +      +E  L  L
Sbjct: 57  LNKNFRDKDYPTDVLSFPMN---DECLEDSILGDIVINLDKVEEYSKENDIPYERELAFL 113

Query: 130 IIHGFLHLLGYDH-VDDKDACVMEGLERSILED 161
            IHG LHLLGYDH +++++  +M  L+  IL+ 
Sbjct: 114 YIHGLLHLLGYDHEINEEEEKIMFDLQEDILKK 146


>gi|168204743|ref|ZP_02630748.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens E
           str. JGS1987]
 gi|170663561|gb|EDT16244.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens E
           str. JGS1987]
          Length = 168

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 17/131 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------------- 94
           +   E+SLVF D+  I  +N E RGID+ T+VLSFP      D                 
Sbjct: 35  KEDCEVSLVFVDNEEIRGINSETRGIDRATDVLSFPMIDYPEDKVYKDVYLEHEFDKCYF 94

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGYDH+++++   M G 
Sbjct: 95  DGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGR 154

Query: 155 ERSILEDLGIN 165
           E  +L  L I 
Sbjct: 155 EEELLGKLNIT 165


>gi|307634994|gb|ADI85044.2| protein of unknown function UPF0054 [Geobacter sulfurreducens
           KN400]
          Length = 150

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 10/152 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +++A+ N      I  R L      + V+  I       ++  ELS+V T    I  +N 
Sbjct: 1   MKVAITNRQKRHPIGTRRL------RKVAETILGALGYPDS--ELSVVITGDLGIRRVNR 52

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +Y G D+PTNV+SF          +  +LGD++++ +    EA   G  F + L  L++H
Sbjct: 53  DYLGKDRPTNVISFAMGEGDFGDLNPDVLGDVIISADTAAREAEEAGIAFWSRLCFLLLH 112

Query: 133 GFLHLLGYDHV--DDKDACVMEGLERSILEDL 162
           G LH+ GYDH    + +A  ME  ER I   L
Sbjct: 113 GTLHITGYDHERSGEAEARRMEAKEREIFALL 144


>gi|328882369|emb|CCA55608.1| metal-dependent hydrolase [Streptomyces venezuelae ATCC 10712]
          Length = 165

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+ +  DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MSIDVNNESGIEVDEQAILDIARYALARMRIHPLS----------ELSVIVVDAEAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+   +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVATQQGKDAPTEHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH + ++   M GL+ +I++      G+  P
Sbjct: 111 EELQLLTVHGVLHLLGYDHEEPEEKAEMFGLQAAIVDGWREEKGLTGP 158


>gi|220912722|ref|YP_002488031.1| metalloprotease [Arthrobacter chlorophenolicus A6]
 gi|254801508|sp|B8H8R4|RRMF_ARTCA RecName: Full=Probable rRNA maturation factor
 gi|219859600|gb|ACL39942.1| protein of unknown function UPF0054 [Arthrobacter chlorophenolicus
           A6]
          Length = 157

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 14/156 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  L  L   +F +                 ELS++  D   +E L
Sbjct: 1   MSIEVNNESGVEVDEAGLVALSRYIFEQ----------LYIHPQAELSILLVDEPAMEKL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + E       T+VLS P                MLGDI +  ++ +++A   G   ++ +
Sbjct: 51  HIELMDEPGATDVLSVPMDDLTPGTPDRPTPQGMLGDIAICPQVAQVQAKNAGHALQDEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L  HG LHLLGYDH + ++   M GL+R +L   
Sbjct: 111 LLLTTHGILHLLGYDHAEPEEKEEMFGLQRELLTGF 146


>gi|169343547|ref|ZP_02864546.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens C
           str. JGS1495]
 gi|169298107|gb|EDS80197.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens C
           str. JGS1495]
          Length = 168

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 17/131 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------------- 94
           +   E+SLVF D+  I  +N E RGID+ T+VLSFP      D                 
Sbjct: 35  KEDCEVSLVFVDNEEIRGINNETRGIDRATDVLSFPMIDYPEDKVYKDVYLEHEFDKCYF 94

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGYDH+++++   M G 
Sbjct: 95  DGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGR 154

Query: 155 ERSILEDLGIN 165
           E  +L  L I 
Sbjct: 155 EEELLGKLNIT 165


>gi|326692991|ref|ZP_08229996.1| putative metalloprotease [Leuconostoc argentinum KCTC 3773]
          Length = 157

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 9/138 (6%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--- 92
              +V N   +   + +N  E+S+ F ++  I+  N EYRG+DKPT+V+SF         
Sbjct: 20  LVTSVINFAGQALALPDN-TEMSITFVNNDDIQRYNREYRGVDKPTDVISFAIEEGDDVF 78

Query: 93  ----SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKD 147
                    +  +GDI+++ ++I  +A  LG  +E  L  L++HGFLHL GYDH+  D +
Sbjct: 79  EQFAEIDEIAKNIGDIIVSVDVIATQAEYLGHSYERELGFLVVHGFLHLNGYDHMLGDAE 138

Query: 148 ACVMEGLERSILEDLGIN 165
              M  L+R IL+D G+ 
Sbjct: 139 EKEMFDLQRKILDDYGLK 156


>gi|291519462|emb|CBK74683.1| conserved hypothetical protein TIGR00043 [Butyrivibrio fibrisolvens
           16/4]
          Length = 165

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 20/168 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E+     +       E V    V+  +    F  E   E+S+  TD+  I+ +N 
Sbjct: 1   MTIFIESEC---DFDFDFDYEKVAKDVVNTAMDHLGFPFE--AEISITITDNDGIQAINK 55

Query: 73  EYRGIDKPTNVLSFPTAFASSDG---------------CSSLMLGDIVLAYEIIEIEANV 117
           E+R ID PT+VLSFP     + G                  ++LGDIVL+   I  +A  
Sbjct: 56  EFRNIDAPTDVLSFPMIDYPAPGKFDHIENDDDLFNPETGEVILGDIVLSVPRILSQAEE 115

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            G         LI H  LHL G+DH+ + DA VME  +R IL+ L I+
Sbjct: 116 YGHSVLREYAFLIAHSMLHLFGFDHMTESDASVMEQKQREILDILNIS 163


>gi|206891031|ref|YP_002248706.1| hypothetical protein THEYE_A0868 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|254806638|sp|B5YKE1|RRMF_THEYD RecName: Full=Probable rRNA maturation factor
 gi|206742969|gb|ACI22026.1| conserved hypothetical protein, putative [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 159

 Score =  143 bits (361), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S++F    +++ LN +YRG +  T++LSFP     ++   +L LG+I++  + +  +A 
Sbjct: 53  ISVIFVGDQKMKELNSKYRGKNSVTDILSFPY--LENEPSGNLFLGEIIINPKKVFSQAK 110

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDL 162
              K F   L  ++ HG LHLLGYDH   D +A  M  LE+ IL +L
Sbjct: 111 QYNKTFWQELDRILAHGILHLLGYDHEVSDSEARKMRKLEQKILSNL 157


>gi|259046833|ref|ZP_05737234.1| metalloprotease [Granulicatella adiacens ATCC 49175]
 gi|259036456|gb|EEW37711.1| metalloprotease [Granulicatella adiacens ATCC 49175]
          Length = 169

 Score =  143 bits (361), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 11/132 (8%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA-----------SS 93
           +  +       E S+ F  S RI  +N ++R IDK T+V+SF                  
Sbjct: 34  AADFLKIPQTKECSISFVSSERIREINRDFRNIDKVTDVISFALDDDDDDLASMQSIMEE 93

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           D      +GDIV++ +  + +A   G   E  L  L +HGFLHL GYDH  +++   M G
Sbjct: 94  DDSFVTSIGDIVISLDRAKEQAEDYGHSLERELGFLALHGFLHLNGYDHQTEEEEAEMTG 153

Query: 154 LERSILEDLGIN 165
           L++ ILE  G+ 
Sbjct: 154 LQQEILEAYGLT 165


>gi|163848855|ref|YP_001636899.1| hypothetical protein Caur_3323 [Chloroflexus aurantiacus J-10-fl]
 gi|222526810|ref|YP_002571281.1| hypothetical protein Chy400_3584 [Chloroflexus sp. Y-400-fl]
 gi|189039853|sp|A9WJ51|RRMF_CHLAA RecName: Full=Probable rRNA maturation factor
 gi|254765075|sp|B9LD66|RRMF_CHLSY RecName: Full=Probable rRNA maturation factor
 gi|163670144|gb|ABY36510.1| protein of unknown function UPF0054 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450689|gb|ACM54955.1| protein of unknown function UPF0054 [Chloroflexus sp. Y-400-fl]
          Length = 154

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 5/119 (4%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLA 107
               E+ +  T    +  LN ++RG+D PT+VLSF      S           LGDI ++
Sbjct: 34  PEGCEVGIRITTDDELHRLNRDFRGVDAPTDVLSFADDGHDSRFVVAPDQPRYLGDIAIS 93

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGIN 165
           Y+ +  +A   G      L +L +HG LHLLGYDH     +A  M   E  I+  LG+ 
Sbjct: 94  YQRVLAQAAEYGHSPARELAYLTVHGVLHLLGYDHEQGPAEAARMRTREEEIMTILGLP 152


>gi|110800128|ref|YP_696698.1| putative metalloprotease [Clostridium perfringens ATCC 13124]
 gi|168208720|ref|ZP_02634345.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens B
           str. ATCC 3626]
 gi|168212945|ref|ZP_02638570.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           CPE str. F4969]
 gi|182624386|ref|ZP_02952170.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens D
           str. JGS1721]
 gi|122958755|sp|Q0TNU2|RRMF_CLOP1 RecName: Full=Probable rRNA maturation factor
 gi|110674775|gb|ABG83762.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           ATCC 13124]
 gi|170713197|gb|EDT25379.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens B
           str. ATCC 3626]
 gi|170715613|gb|EDT27795.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           CPE str. F4969]
 gi|177910389|gb|EDT72766.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens D
           str. JGS1721]
          Length = 168

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 17/131 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------------- 94
           +   E+SLVF D+  I  +N E RGID+ T+VLSFP      D                 
Sbjct: 35  KEDCEVSLVFVDNEEIRGINNETRGIDRATDVLSFPMIDYPEDKVYKDVYLEHEFDKCYF 94

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGYDH+++++   M G 
Sbjct: 95  DGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGR 154

Query: 155 ERSILEDLGIN 165
           E  +L  L I 
Sbjct: 155 EEELLGKLNIT 165


>gi|209542256|ref|YP_002274485.1| hypothetical protein Gdia_0068 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209529933|gb|ACI49870.1| protein of unknown function UPF0054 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 202

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           D  + V +A W   +            A+    ++  +  +    ++++  +   I  LN
Sbjct: 46  DCDVVVTDARWHGAVPG--------IAALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLN 97

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
             +R  +KPTNVL+F       D    L  GDI++A E +  EA   G+   +HL+HL++
Sbjct: 98  ARHRDRNKPTNVLTF-------DYPGGLPGGDIMIALETVRREAQAAGRPIRHHLMHLVV 150

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           HG LHL G+DH    +A  ME  E  IL  L + +P++
Sbjct: 151 HGILHLRGHDHHQAGEARRMEMEEARILGRLSVPNPWK 188


>gi|168307881|ref|ZP_02690556.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           1 str. ATCC 27813]
 gi|171902725|gb|EDT49014.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           1 str. ATCC 27813]
          Length = 155

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 5/136 (3%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            L    F +    + +K    K+   E    F D   I+ +N  YR  D  T+V+SF   
Sbjct: 16  KLYSQRFKQITDLVSTKLNIDKKRFFECH--FVDEKTIQKINKNYRNKDYITDVISFAF- 72

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                   + +LG++ + Y+ +  +A+     FE  L  L  HG LHLLGYDH+  +D  
Sbjct: 73  --DDGEIITPLLGEMYICYQKVVDQASQFAHSFERELCFLFTHGLLHLLGYDHIKIEDEK 130

Query: 150 VMEGLERSILEDLGIN 165
           +M  L+  IL +L I 
Sbjct: 131 IMFALQDEILNELKIT 146


>gi|13358053|ref|NP_078327.1| hypothetical protein UU490 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|167971447|ref|ZP_02553724.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           6 str. ATCC 27818]
 gi|170762010|ref|YP_001752574.1| hypothetical protein UPA3_0508 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|29428267|sp|Q9PQ00|RRMF_UREPA RecName: Full=Probable rRNA maturation factor
 gi|189040230|sp|B1AJD0|RRMF_UREP2 RecName: Full=Probable rRNA maturation factor
 gi|11356818|pir||A82884 conserved hypothetical UU490 [imported] - Ureaplasma urealyticum
 gi|6899488|gb|AAF30902.1|AE002147_3 conserved hypothetical [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827587|gb|ACA32849.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           3 str. ATCC 27815]
 gi|186701087|gb|EDU19369.1| conserved hypothetical protein TIGR00043 [Ureaplasma parvum serovar
           6 str. ATCC 27818]
          Length = 155

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 5/136 (3%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            L    F +    + +K    K+   E    F D   I+ +N  YR  D  T+V+SF   
Sbjct: 16  KLYSQRFKQITDLVSTKLNIDKKRFFECH--FVDEKTIQEINKNYRNKDYITDVISFAF- 72

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                   + +LG++ + Y+ +  +A+     FE  L  L  HG LHLLGYDH+  +D  
Sbjct: 73  --DDGEIITPLLGEMYICYQKVVDQASQFAHSFERELCFLFTHGLLHLLGYDHIKIEDEK 130

Query: 150 VMEGLERSILEDLGIN 165
           +M  L+  IL +L I 
Sbjct: 131 IMFALQDEILNELKIT 146


>gi|260662172|ref|ZP_05863068.1| metal-dependent hydrolase [Lactobacillus fermentum 28-3-CHN]
 gi|260553555|gb|EEX26447.1| metal-dependent hydrolase [Lactobacillus fermentum 28-3-CHN]
          Length = 157

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 14/145 (9%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
             L E V A+A   L            E+SL F  +  I  LN +YRGID+ T+V+SF  
Sbjct: 18  ERLAEKVLAQAAERLDVPEQ------AEMSLTFVLNPEIRELNRDYRGIDRATDVISFAI 71

Query: 89  AFASS--------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
                             + LGD+V++ + +  +A  L    +  L +L++HGFLHL GY
Sbjct: 72  EDDDDLANLPAEIRAELPVELGDLVISIDKVTEQALFLNHSADRELGYLLVHGFLHLNGY 131

Query: 141 DHVDDKDACVMEGLERSILEDLGIN 165
           DH +  D   M  L+  IL+ LG++
Sbjct: 132 DHEEPADEEKMFTLQEEILDGLGLS 156


>gi|17227767|ref|NP_484315.1| putative metalloprotease [Nostoc sp. PCC 7120]
 gi|26006906|sp|Q8Z032|RRMF_NOSS1 RecName: Full=Probable rRNA maturation factor
 gi|17135249|dbj|BAB77795.1| all0271 [Nostoc sp. PCC 7120]
          Length = 184

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 16  AVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           A + + + D        +  F + +  L S          E+ L  TD   I+ +N +YR
Sbjct: 27  AAQASGYMDSQVSPATWQDWFHRWLEILDSS--LPPAPSYEIGLRLTDDTEIQAINAQYR 84

Query: 76  GIDKPTNVLSFPTAFASSDG-----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
             +KPT+VL+F                 L LGDIV++    + +A          L  L 
Sbjct: 85  QQNKPTDVLAFAALEVDLPQNPEMVAEPLYLGDIVVSINTAQRQAGQQEHSLSTELAWLT 144

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            HG LHLLG+DH D++    M   +  +LE +GIN
Sbjct: 145 AHGLLHLLGWDHPDEESLIAMLQQQVVLLEAIGIN 179


>gi|119960557|ref|YP_947971.1| metalloprotease [Arthrobacter aurescens TC1]
 gi|166227688|sp|A1R6V9|RRMF_ARTAT RecName: Full=Probable rRNA maturation factor
 gi|119947416|gb|ABM06327.1| putative uncharacterized protein family UPF0054 [Arthrobacter
           aurescens TC1]
          Length = 157

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  L TL   +F +                 ELS++  D   +E L
Sbjct: 1   MSIEVNNESGVVVDEAQLVTLSRFIFER----------LYIHPQAELSILLVDEPAMEKL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + E       T+VLS P                MLGDI +  ++ E++A   G   ++ +
Sbjct: 51  HIELMDEPGATDVLSVPMDELTPGTPEKPTPQGMLGDIAICPQVAEVQARNAGHPTQDEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
           + L  HG LHLLG+DH + ++   M GL+R +L + LG + P E 
Sbjct: 111 LLLTTHGILHLLGFDHAEPEEKEEMFGLQRELLSEFLGKDAPMET 155


>gi|262203048|ref|YP_003274256.1| hypothetical protein Gbro_3158 [Gordonia bronchialis DSM 43247]
 gi|262086395|gb|ACY22363.1| protein of unknown function UPF0054 [Gordonia bronchialis DSM
           43247]
          Length = 188

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++ A E+ +   E+    + E      V+  ++           LS++  D   +  +
Sbjct: 1   MSIEFANESGV---EVPAELIIEAARFAIVAMDVNPAAL-------LSVLCVDEDTMADM 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + ++  +  PT+V+SFP           +      +LGDIVL  E    +A    + F++
Sbjct: 51  HVQWMDLPGPTDVMSFPMDELVPGGRPDAADLGPAILGDIVLCPEFAAQQAKTAKRSFDH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLG+DH D  +   M GL+  IL+  
Sbjct: 111 ELSMLTIHGVLHLLGFDHADPDEEREMFGLQNEILDAF 148


>gi|85859387|ref|YP_461589.1| metal-dependent hydrolase [Syntrophus aciditrophicus SB]
 gi|123516585|sp|Q2LTL4|RRMF_SYNAS RecName: Full=Probable rRNA maturation factor
 gi|85722478|gb|ABC77421.1| predicted metal-dependent hydrolase [Syntrophus aciditrophicus SB]
          Length = 160

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 10/156 (6%)

Query: 5   KVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
           K    R+ + IA+ N     +I LR +      + V  L+     V     E+SL+F D 
Sbjct: 2   KRAFERMSMAIAIRNQQKKVKIDLRQI-----RRRVQKLL---RLVDCREKEISLLFVDD 53

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
             I+ +N  Y G + PTNV+SF  +       +  +LGDIV++ +    +A        +
Sbjct: 54  EEIQEINQRYLGRNYPTNVISFSLSEGEFSSVNPDVLGDIVISVDTASRDAERGNIPVSD 113

Query: 125 HLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSI 158
            L  LIIHG LH+LGY+H   + ++   M+  E+ +
Sbjct: 114 ELDFLIIHGLLHILGYNHENNNPEETACMQKKEQEL 149


>gi|312869122|ref|ZP_07729296.1| translation metalloprotein YbeY [Lactobacillus oris PB013-T2-3]
 gi|311095368|gb|EFQ53638.1| translation metalloprotein YbeY [Lactobacillus oris PB013-T2-3]
          Length = 159

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 17/164 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL I  E         L         + V    ++   +K++  E+S+    +  I  L
Sbjct: 1   MDLTIYDETDGQVSPAQL------ALVRDVLQFAARQLSLKDS-TEMSVTMMTNPAIRKL 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGC----------SSLMLGDIVLAYEIIEIEANVLGK 120
           N +YRG+D+ T+VLSF    +  +                LGD+ ++ + +E +A  LG 
Sbjct: 54  NQQYRGVDRATDVLSFAAEESGDETPIIMDPELAAELPENLGDLFVSIDKVEEQAKFLGH 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +  L  L++HGFLHL GYDH    D   M  L+R IL++ G+
Sbjct: 114 SVDRELGFLVVHGFLHLNGYDHEKQADEQRMFDLQREILDEYGL 157


>gi|110801968|ref|YP_699299.1| putative metalloprotease [Clostridium perfringens SM101]
 gi|122956576|sp|Q0SRF8|RRMF_CLOPS RecName: Full=Probable rRNA maturation factor
 gi|110682469|gb|ABG85839.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           SM101]
          Length = 168

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 17/131 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------------- 94
           +   E+SLVF D+  I  +N E RGIDK T+VLSFP      D                 
Sbjct: 35  KEDCEVSLVFVDNEEIRGINNETRGIDKTTDVLSFPMIDYPEDKVYKDVYLEHEFDKCYF 94

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGYDH+++++   M G 
Sbjct: 95  DGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGR 154

Query: 155 ERSILEDLGIN 165
           E  +L  L I 
Sbjct: 155 EEELLGKLNIT 165


>gi|116491017|ref|YP_810561.1| metal-dependent hydrolase [Oenococcus oeni PSU-1]
 gi|290890498|ref|ZP_06553573.1| hypothetical protein AWRIB429_0963 [Oenococcus oeni AWRIB429]
 gi|122276801|sp|Q04F76|RRMF_OENOB RecName: Full=Probable rRNA maturation factor
 gi|116091742|gb|ABJ56896.1| Predicted metal-dependent hydrolase [Oenococcus oeni PSU-1]
 gi|290479894|gb|EFD88543.1| hypothetical protein AWRIB429_0963 [Oenococcus oeni AWRIB429]
          Length = 153

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +++     +     L + V A A        +   +   E+S+ F +  +I  +N EY
Sbjct: 5   IVLDDKQKELDNDDAKLVKKVLAFAFD------FMQLKQNYEMSVNFVNDEKIHQINKEY 58

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLM--LGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           R  D+ T+V+SF    +       +   LGD+ ++ +    +A      +   L +L +H
Sbjct: 59  RNTDRATDVISFALEESDRIHIDGVAEELGDLFISLDHAHAQAEEYLHSYNRELAYLAVH 118

Query: 133 GFLHLLGYDHVDDKDAC-VMEGLERSILEDLGIN 165
           GFLHLLGYDH   + A   M GL+  ILE  G+ 
Sbjct: 119 GFLHLLGYDHTRSQAAEDEMFGLQDKILEGYGLT 152


>gi|86159141|ref|YP_465926.1| hypothetical protein Adeh_2719 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123498733|sp|Q2ILG1|RRMF_ANADE RecName: Full=Probable rRNA maturation factor
 gi|85775652|gb|ABC82489.1| protein of unknown function UPF0054 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 193

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 3/112 (2%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
              ELS++     RI TLN E+R  D+ T+VLSFP +     G    +LGD+V++ +   
Sbjct: 33  EDAELSILLVTDRRIRTLNREWRQKDQATDVLSFPISEPPGAGA---LLGDVVISLDTAA 89

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             A   G+     L   + HG LHLLGYDH    DA  M   E  +    G+
Sbjct: 90  RRARSDGRRVGAELDRYLAHGILHLLGYDHERPADARAMAEKEAELARAEGL 141


>gi|225429386|ref|XP_002278343.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1499

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 3    VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
            +    + RLD+ IA+       ++    + +  +    + +   G F     VELS++  
Sbjct: 1037 LNIAEMLRLDVPIAM-------KLAFEGIKDSEYKTRDTTISDLGGF---ENVELSVLLC 1086

Query: 63   DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
            +   I  LN E+R  D  T+VLS             LMLGDIV++ E    +A   G   
Sbjct: 1087 NDEFIRKLNKEWRDEDHATDVLSMSQHIPEL-KLPILMLGDIVISVETAARQAEERGHTL 1145

Query: 123  ENHLVHLIIHGFLHLLGYDHV 143
             + +  L++HG LHLLG+DH 
Sbjct: 1146 LDEIRILMVHGLLHLLGFDHE 1166


>gi|300780717|ref|ZP_07090571.1| metalloprotease [Corynebacterium genitalium ATCC 33030]
 gi|300532424|gb|EFK53485.1| metalloprotease [Corynebacterium genitalium ATCC 33030]
          Length = 195

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 7/116 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVL 106
             E+++   DS  +  L+  +  +  PT+V+SFP            +      MLGDI+L
Sbjct: 35  DTEVTITCVDSPTMADLHMRWMDLPGPTDVMSFPMDELSPGSARPDAAAIGPAMLGDIIL 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             +    +A   G    + +  L +HG LHLLGYDH    D   M GL+  IL D 
Sbjct: 95  CPDYDRKQAEAAGHPLGHEMALLTVHGVLHLLGYDHATPADEREMFGLQNEILADW 150


>gi|241895553|ref|ZP_04782849.1| metal-dependent hydrolase [Weissella paramesenteroides ATCC 33313]
 gi|241871131|gb|EER74882.1| metal-dependent hydrolase [Weissella paramesenteroides ATCC 33313]
          Length = 160

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL I  ++     E  ++ + +V+         +  Y       E+S+ F ++  I+  
Sbjct: 1   MDLAIIDQSKPGVPEEQVKLVNDVLNY-------AGKYLSLPENTEMSVTFVNNDEIQRY 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD----------GCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYRG+DK T+V+SF       D             +  +GDI+++ + I  +A  L  
Sbjct: 54  NREYRGLDKATDVISFAIEDDGDDLPLLIDDEMADDIAKNIGDIIVSVDKIGEQAEYLEH 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGIN 165
            +E  L  L++HGFLHL GYDH+  + D  +M  L+R IL+  G+ 
Sbjct: 114 SYERELGFLVVHGFLHLNGYDHMRSEADEKIMFDLQREILDSYGLK 159


>gi|210623872|ref|ZP_03294107.1| hypothetical protein CLOHIR_02058 [Clostridium hiranonis DSM 13275]
 gi|210153298|gb|EEA84304.1| hypothetical protein CLOHIR_02058 [Clostridium hiranonis DSM 13275]
          Length = 153

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 4/144 (2%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+I ++          V  ++    +   +  ++S+ F D+  I  LN ++RG+D+ T+V
Sbjct: 10  DKIDIKDELYEKIEDIVEEVLDYEGYS--DDYDISISFVDNKEIHELNKQFRGVDRATDV 67

Query: 84  LSFPTAFASSDGCS--SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           LSFP      +      + LGDIV++ E    ++   G  FE  +  L+ H   HLLGYD
Sbjct: 68  LSFPMLSDEFEDVEYEEMSLGDIVVSLERALEQSIEYGHSFEREVCFLVCHSMFHLLGYD 127

Query: 142 HVDDKDACVMEGLERSILEDLGIN 165
           H  D++   M   E ++L  L I 
Sbjct: 128 HDTDENTREMREKEEAVLTKLNIT 151


>gi|269127453|ref|YP_003300823.1| hypothetical protein Tcur_3246 [Thermomonospora curvata DSM 43183]
 gi|268312411|gb|ACY98785.1| protein of unknown function UPF0054 [Thermomonospora curvata DSM
           43183]
          Length = 156

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 19/161 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  L  L   V  +               + ELSL+  D   +  L
Sbjct: 1   MSIEVLNESGVEVDEQALVRLARHVLDE----------LRVHPLAELSLLLVDEEAMSEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF---------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + ++ G   PT+VL+FP               +     +LGD+VL   + E +    G  
Sbjct: 51  HVKWMGEPGPTDVLAFPMDELRPGHRPGGGEEEDPDPALLGDVVLCPAVAERQGAEAGHG 110

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +  L  L  HG LHLLGYDH D ++   M GL+  +L   
Sbjct: 111 TQAELELLCTHGILHLLGYDHADPEEHKEMFGLQERLLNSW 151


>gi|125973584|ref|YP_001037494.1| hypothetical protein Cthe_1069 [Clostridium thermocellum ATCC
           27405]
 gi|256003403|ref|ZP_05428394.1| protein of unknown function UPF0054 [Clostridium thermocellum DSM
           2360]
 gi|281417789|ref|ZP_06248809.1| protein of unknown function UPF0054 [Clostridium thermocellum JW20]
 gi|166228137|sp|A3DEC2|RRMF_CLOTH RecName: Full=Probable rRNA maturation factor
 gi|125713809|gb|ABN52301.1| protein of unknown function UPF0054 [Clostridium thermocellum ATCC
           27405]
 gi|255992693|gb|EEU02784.1| protein of unknown function UPF0054 [Clostridium thermocellum DSM
           2360]
 gi|281409191|gb|EFB39449.1| protein of unknown function UPF0054 [Clostridium thermocellum JW20]
 gi|316940174|gb|ADU74208.1| protein of unknown function UPF0054 [Clostridium thermocellum DSM
           1313]
          Length = 162

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 15/164 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I +EN    D+I +      +  KA+   +    F  E   E+S++ TD+ +I  +N+
Sbjct: 1   MEIFIENIQ--DKIEITDEILELMEKAIKMCLEHEKF--EYPYEVSIILTDNEKIREINY 56

Query: 73  EYRGIDKPTNVLSFPTAFASSD-----------GCSSLMLGDIVLAYEIIEIEANVLGKE 121
           E R IDKPT+VLSFP                      ++LGDI+++ E  + ++   G  
Sbjct: 57  EQRNIDKPTDVLSFPIVDMYDGVIKSSQGDFDLDEGRIILGDILISMEKAKEQSMEYGHS 116

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           FE  L+ L+ HG  HLLGYDH   +    M   + +IL+ L + 
Sbjct: 117 FERELIFLLTHGVFHLLGYDHDTPEREKKMFEKQEAILKSLNLE 160


>gi|168181634|ref|ZP_02616298.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum Bf]
 gi|237796401|ref|YP_002863953.1| putative metalloprotease [Clostridium botulinum Ba4 str. 657]
 gi|259646946|sp|C3L3F6|RRMF_CLOB6 RecName: Full=Probable rRNA maturation factor
 gi|182675188|gb|EDT87149.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum Bf]
 gi|229263327|gb|ACQ54360.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum Ba4
           str. 657]
          Length = 166

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 17/128 (13%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GC 96
             E+S+VF D++ I+ +N +YR IDK T+VLSFP                  F  SD   
Sbjct: 37  DYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEEGKVFKDVYLNYEFDESDLDE 96

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++++  +M   E 
Sbjct: 97  GNLILGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEEEEKAIMRQREE 156

Query: 157 SILEDLGI 164
            IL+   +
Sbjct: 157 EILKSFNL 164


>gi|260583649|ref|ZP_05851397.1| metalloprotease [Granulicatella elegans ATCC 700633]
 gi|260158275|gb|EEW93343.1| metalloprotease [Granulicatella elegans ATCC 700633]
          Length = 161

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 26  IHLRTLCEVVFAKAVSNLISKG--YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           I    + +  + K V +++S    Y       E  + F  S RI  +N ++R IDK T+V
Sbjct: 6   IDETEVVKEEYQKLVEDVVSFASDYLHYPENRECCISFVSSERIREINRDFRNIDKVTDV 65

Query: 84  LSFPTAFASSDGCSSLM-----------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +SF       D                 +GDI+++ +  + +A   G   E  L  L +H
Sbjct: 66  ISFALDDEDEDMDPIKNFMASDENFVTSIGDIIISVDRAKEQAEEYGHSLERELGFLALH 125

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLHL GYDH  +++   M GL+  IL   G+ 
Sbjct: 126 GFLHLNGYDHQTEEEEKEMTGLQTEILTAYGLT 158


>gi|258645788|ref|ZP_05733257.1| putative metalloprotease [Dialister invisus DSM 15470]
 gi|260403159|gb|EEW96706.1| putative metalloprotease [Dialister invisus DSM 15470]
          Length = 164

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 4/139 (2%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKE--NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
                      +  ++SKG  ++      ELSL+  D+  I  LN  YRG+D PT+VLSF
Sbjct: 11  EQFYSEELETLILRVLSKGAELQNVAEDAELSLLICDADTIHELNKTYRGVDAPTDVLSF 70

Query: 87  PTAFASSDGCSSL--MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
                  +       +LGDI++       +A   G   E  + +L +HGFLH+LGYDH D
Sbjct: 71  ALNEGEEEDGMEEEKVLGDIIINLYRAVEQAEEFGHSKEREMAYLSVHGFLHILGYDHYD 130

Query: 145 DKDACVMEGLERSILEDLG 163
            ++   M   E  IL   G
Sbjct: 131 PEEKRKMREKEEEILGACG 149


>gi|227432227|ref|ZP_03914223.1| metal-dependent hydrolase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352000|gb|EEJ42230.1| metal-dependent hydrolase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 160

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 11/132 (8%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----- 99
           +  Y    +  E+S+ F ++  I   N +YRGIDKPT+V+SF       D          
Sbjct: 28  AGKYLELPDNTEMSVTFMNNEEIHQYNKKYRGIDKPTDVISFAIEEDGDDLPVLPDEFMD 87

Query: 100 -----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEG 153
                 +GDI+++ +II  +A  LG  +E  L  L++HGFLHL GYDH+  D +   M  
Sbjct: 88  AVLAKNIGDILVSVDIINSQAEYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFD 147

Query: 154 LERSILEDLGIN 165
           L+R IL++ G+ 
Sbjct: 148 LQREILDNYGLK 159


>gi|168215645|ref|ZP_02641270.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           NCTC 8239]
 gi|182382067|gb|EDT79546.1| conserved hypothetical protein TIGR00043 [Clostridium perfringens
           NCTC 8239]
          Length = 168

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 17/131 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------------- 94
           +   E+SLVF D+  I  +N E RGID+ T+VLSFP      D                 
Sbjct: 35  KEDCEVSLVFVDNEEIRGINNETRGIDRATDVLSFPMIDYPEDKVYKDVYLEHEFDKCYF 94

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L+LGDIVL+ E  + ++      FE    +L+ H  LHLLGYDH+++++   M G 
Sbjct: 95  DEDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGR 154

Query: 155 ERSILEDLGIN 165
           E  +L  L I 
Sbjct: 155 EEELLGKLNIT 165


>gi|313892397|ref|ZP_07825989.1| translation metalloprotein YbeY [Dialister microaerophilus UPII
           345-E]
 gi|329121359|ref|ZP_08249985.1| putative metalloprotease [Dialister micraerophilus DSM 19965]
 gi|313119256|gb|EFR42456.1| translation metalloprotein YbeY [Dialister microaerophilus UPII
           345-E]
 gi|327469768|gb|EGF15234.1| putative metalloprotease [Dialister micraerophilus DSM 19965]
          Length = 169

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 3/139 (2%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +  C     + +  ++ KG  ++      EL ++   + RI  LN +YRGID PT+VLSF
Sbjct: 10  QKYCNEETEQLILKVLKKGAELQKLPEDAELGVLICGAERIHELNRDYRGIDAPTDVLSF 69

Query: 87  PTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                          LGDI+L  +  + +A++ G   E  + +L +HGFLH+LGYDH + 
Sbjct: 70  ALNEGEDYIPEEEKALGDIILNIDRAKEQAHMYGHSEEREMAYLSVHGFLHILGYDHYEA 129

Query: 146 KDACVMEGLERSILEDLGI 164
           ++   M   E  IL   G+
Sbjct: 130 EEKKEMRKAEEDILGACGL 148


>gi|25028742|ref|NP_738796.1| putative metalloprotease [Corynebacterium efficiens YS-314]
 gi|259507803|ref|ZP_05750703.1| metalloprotease [Corynebacterium efficiens YS-314]
 gi|29428209|sp|Q8FNF8|RRMF_COREF RecName: Full=Probable rRNA maturation factor
 gi|23494028|dbj|BAC18996.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164596|gb|EEW49150.1| metalloprotease [Corynebacterium efficiens YS-314]
          Length = 200

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF-------ASSDGCS 97
           + G        E S+   DS  I  L+ ++  ++ PT+V+SFP                 
Sbjct: 26  ALGEMDIHPDAEASIHIVDSDTIAELHVKWLDLEGPTDVMSFPMDELTPGYSRPDGGAPG 85

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDIVL  E  E +A   G +  + L  L +HG LHLLGYDHV+      M  L+  
Sbjct: 86  PAMLGDIVLCPEFAEKQATKAGHDLSHELALLTVHGCLHLLGYDHVEPAQEREMFALQNE 145

Query: 158 ILEDL 162
           +L D 
Sbjct: 146 LLADW 150


>gi|113478351|ref|YP_724412.1| putative metalloprotease [Trichodesmium erythraeum IMS101]
 gi|122964299|sp|Q10UY5|RRMF_TRIEI RecName: Full=Probable rRNA maturation factor
 gi|110169399|gb|ABG53939.1| protein of unknown function UPF0054 [Trichodesmium erythraeum
           IMS101]
          Length = 183

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 24/175 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTL----------------CEVVFAKAVSNLISKGYFVKENI 54
           + L++ +++  W     ++ L                 E  F K +   I +        
Sbjct: 1   MYLKVNIQDYFWSSSSEVKKLKLQEDRDQKCPIFFYRWEYWFQKWLE--ILQPNIPPAQN 58

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIVLAY 108
            ELSL  TD   I+ LN +YR  ++PT+VL+F                  L LGDIV++ 
Sbjct: 59  YELSLRLTDDSEIQILNNKYRYQNQPTDVLAFANLEVDIPQPEVVDSDLQLYLGDIVISV 118

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E    +A   G      L  L  HGFLHLLG+DH+D +    M   +  +L  +G
Sbjct: 119 ETAFQQAKQQGHPLITELTWLAAHGFLHLLGWDHLDQESWQKMVKQQLFLLNAVG 173


>gi|170017068|ref|YP_001727987.1| metal-dependent hydrolase [Leuconostoc citreum KM20]
 gi|238688965|sp|B1MYE1|RRMF_LEUCK RecName: Full=Probable rRNA maturation factor
 gi|169803925|gb|ACA82543.1| Predicted metal-dependent hydrolase [Leuconostoc citreum KM20]
          Length = 160

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 11/122 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------GCSSLMLGDI 104
            E+S+ F ++  I+  N +YRG+DKPT+V+SF       D             +  +GDI
Sbjct: 38  TEMSVTFVNNDEIQRYNRDYRGVDKPTDVISFAIEEGEDDFNIISDDAWTEDIAKNIGDI 97

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLG 163
           +++ +II  +A  LG  +E  L  L++HGFLHL GYDH+  D +   M  L+R IL++ G
Sbjct: 98  IVSVDIIGAQAEYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFDLQREILDNYG 157

Query: 164 IN 165
           + 
Sbjct: 158 LK 159


>gi|171743045|ref|ZP_02918852.1| hypothetical protein BIFDEN_02170 [Bifidobacterium dentium ATCC
           27678]
 gi|283455944|ref|YP_003360508.1| hypothetical protein BDP_1043 [Bifidobacterium dentium Bd1]
 gi|171278659|gb|EDT46320.1| hypothetical protein BIFDEN_02170 [Bifidobacterium dentium ATCC
           27678]
 gi|283102578|gb|ADB09684.1| Conserved hypothetical protein [Bifidobacterium dentium Bd1]
          Length = 181

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP               +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGRTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|238809604|dbj|BAH69394.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 173

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L E  + + + NL  +  F     V + +  T++  I+ LN EYR  D PT++LSF    
Sbjct: 37  LFEKEYKQILENLAKE--FGLNQTVSVDVTITNNDEIQKLNKEYRNKDYPTDILSFGLED 94

Query: 91  AS-SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               +      LG++V+++E +E +A            +L  HG +HL+GYDH  + +  
Sbjct: 95  WELFENMPIYPLGELVISHEKVEAQAQEFVHSIRREYCYLFAHGLIHLMGYDHETEVERA 154

Query: 150 VMEGLERSILEDLGIN 165
            M  L   I E L I+
Sbjct: 155 EMNKLVDLIFEPLKIS 170


>gi|291563244|emb|CBL42060.1| conserved hypothetical protein TIGR00043 [butyrate-producing
           bacterium SS3/4]
          Length = 165

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 18/158 (11%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKG--YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           E       ++ + + + N+I +   Y       E++++ TD+  I  +N + RGID PT+
Sbjct: 6   EYEAEEKLDLPYEEIIKNVIEESLDYVECPYDAEVNVLLTDNAGIHQINLDMRGIDNPTD 65

Query: 83  VLSFPT----------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           VLSFP                           L++GDIV++ + ++ +A   G      L
Sbjct: 66  VLSFPMCDFETPGDFSHLEETPEEYFDPDTGELLMGDIVISVDKVKEQAEKYGHSQTREL 125

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             L+ H  LHL GYDH++D +   ME ++R ILE  G 
Sbjct: 126 AFLVAHSMLHLSGYDHMEDDERIQMEDMQREILERRGY 163


>gi|313888895|ref|ZP_07822555.1| translation metalloprotein YbeY [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845068|gb|EFR32469.1| translation metalloprotein YbeY [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 148

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+I +    + +  K++++++       E  VE+S+ F     I+ LN +YRG+D+ T+V
Sbjct: 10  DDIEITDEIKSLVEKSIASVLKVEGLDDE--VEVSVSFVGDEEIKNLNRDYRGVDRSTDV 67

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           LSFP            +LGD+++    +  +A  LG   E  L +L +H  LHLLGYDH+
Sbjct: 68  LSFPM--DDEFIIDKRILGDVIINTRRVMEQAEELGHSHERELSYLTVHSILHLLGYDHM 125

Query: 144 DDKDACVMEGLERSILEDLGI 164
           +D+D   M   E+  +++L I
Sbjct: 126 EDEDKREMREREKLSMKELEI 146


>gi|162447804|ref|YP_001620936.1| hypothetical protein ACL_0950 [Acholeplasma laidlawii PG-8A]
 gi|189040645|sp|A9NGT0|RRMF_ACHLI RecName: Full=Probable rRNA maturation factor
 gi|161985911|gb|ABX81560.1| conserved hypothetical protein [Acholeplasma laidlawii PG-8A]
          Length = 137

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 5/128 (3%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
                ++   +   +    + ++F D+ +I  +N  YR IDKPT+V+SFP      D   
Sbjct: 14  TQFEVILETVFKDIKEEKSMQVIFVDNDQIRDINKMYRNIDKPTDVISFPNDDEKDDS-- 71

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
              LGDI ++ +  +I+A   G   E  +  L +HG+LHLLGYDH  + +   M  L+  
Sbjct: 72  ---LGDIFISIDQAKIQALDYGHTLEREIGFLAVHGYLHLLGYDHHTEAEEKEMFTLQEE 128

Query: 158 ILEDLGIN 165
           IL    + 
Sbjct: 129 ILNKANLK 136


>gi|253577936|ref|ZP_04855208.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850254|gb|EES78212.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 164

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 22/170 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++QI  E      E  L    E +  K    ++           +++LV TD+  IE +
Sbjct: 1   MNMQIDYET-----ERELGIDYETLAVKVADKVLEME--KCPYDAQVNLVLTDNEEIERV 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD---------------GCSSLMLGDIVLAYEIIEIEA 115
           N E+R I +PT+VLSFP     +                    L+LGDI+++ + +  +A
Sbjct: 54  NTEFRDIARPTDVLSFPMIPFETPAGYDIVEEDESYFDLDTDELLLGDIMISVDKVFAQA 113

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G         L+ H  LHLLGYDH+   +A VME  +   LE+LGI 
Sbjct: 114 EEYGHSVTREFCFLVAHSMLHLLGYDHMTPGEATVMEAKQAKALEELGIT 163


>gi|160892625|ref|ZP_02073415.1| hypothetical protein CLOL250_00155 [Clostridium sp. L2-50]
 gi|156865666|gb|EDO59097.1| hypothetical protein CLOL250_00155 [Clostridium sp. L2-50]
          Length = 170

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 23/177 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L I  E            + E V  +A+       +       E+ ++ TD+  I+T+
Sbjct: 1   MSLNIENEFGEIRVP-DYEHVIETVIGQALD------FIKCPYECEIYVLLTDNSGIQTI 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGC----------------SSLMLGDIVLAYEIIEIE 114
           N   R ID PT+VLSFP       G                   LMLGDI+++ + +  +
Sbjct: 54  NNCQRNIDAPTDVLSFPLIDYKEPGDFSVVDGDTCDYFNPESGELMLGDIIISMDRVYEQ 113

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           A          L  L+ H  LHL GYDH+D+++   ME L+  IL + G    YE +
Sbjct: 114 AKSYNHSNTRELAFLVAHSMLHLFGYDHIDEEERKQMEDLQEQILNEKGYTRDYEEN 170


>gi|227833630|ref|YP_002835337.1| hypothetical protein cauri_1806 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262184633|ref|ZP_06044054.1| putative metalloprotease [Corynebacterium aurimucosum ATCC 700975]
 gi|254800637|sp|C3PHU5|RRMF_CORA7 RecName: Full=Probable rRNA maturation factor
 gi|227454646|gb|ACP33399.1| hypothetical protein cauri_1806 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 191

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 20/162 (12%)

Query: 11  LDLQIAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + ++   E+   G +E  L  +C              G        E ++   D   I  
Sbjct: 1   MSIEFINESGYDGVNEEMLIDVCSYAL----------GCLDVNPDAECTITAVDLDTIAD 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDIVLAYEIIEIEANVLGK 120
           L+  +  ++ PT+V+SFP    +                MLGDIVL  E  + +A   G 
Sbjct: 51  LHVRWMDLEGPTDVMSFPMDELTPGASAGRPDAVEAGPAMLGDIVLCPEFAQRQATAAGH 110

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              + L  L +HG LHLLGYDH    +   M GL+  +L D 
Sbjct: 111 SLGHELALLTVHGCLHLLGYDHTTAAEEKEMFGLQNELLADW 152


>gi|282899045|ref|ZP_06307026.1| protein of unknown function UPF0054 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195961|gb|EFA70877.1| protein of unknown function UPF0054 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 174

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 10/172 (5%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS--KGYFVKENIVELS 58
           MS +     +L +++ +EN+   D      + E  +    S  ++       +    E+ 
Sbjct: 1   MSSQTKVQTQLQVELFIENSY--DLNLTNQVSEEKWYMWFSQWLTLLAVKLPRALSYEIG 58

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIVLAYEIIE 112
           L  T+  +I+ LN +YR  D+PT+VL+F     +            L LGDIV++ +   
Sbjct: 59  LQLTNDAQIQELNAQYRQKDQPTDVLAFAALENNFPYTEEMLASQPLYLGDIVISIDTAI 118

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +A          L  L  HG LHLLG+DH D++    M   +  +L+ +GI
Sbjct: 119 CQAQEREHNLTTELAWLSAHGLLHLLGWDHPDEQSLIEMLNKQSMLLKSVGI 170


>gi|15827258|ref|NP_301521.1| metalloprotease [Mycobacterium leprae TN]
 gi|221229736|ref|YP_002503152.1| putative metalloprotease [Mycobacterium leprae Br4923]
 gi|2851628|sp|Q49752|RRMF_MYCLE RecName: Full=Probable rRNA maturation factor
 gi|254806550|sp|B8ZUT0|RRMF_MYCLB RecName: Full=Probable rRNA maturation factor
 gi|13092807|emb|CAC30136.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219932843|emb|CAR70721.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
          Length = 178

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+     E+ L ++   V  K   N             ELS+V  D+  +  L
Sbjct: 1   MSVEVSNESGFDVSEVELVSVARFVIIKMDVN----------PAAELSMVLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDEFEPGGRPDAAEPGPSMLGDIVLCPEFAAQQAAAEGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 111 ELALLTIHGVLHLLGYDHGEPDEEKEMFALQGRLLEEW 148


>gi|306822850|ref|ZP_07456226.1| probable metalloprotease [Bifidobacterium dentium ATCC 27679]
 gi|309801136|ref|ZP_07695265.1| translation metalloprotein YbeY [Bifidobacterium dentium
           JCVIHMP022]
 gi|304553482|gb|EFM41393.1| probable metalloprotease [Bifidobacterium dentium ATCC 27679]
 gi|308222025|gb|EFO78308.1| translation metalloprotein YbeY [Bifidobacterium dentium
           JCVIHMP022]
          Length = 181

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP               +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGRTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|300173400|ref|YP_003772566.1| putative metalloprotease [Leuconostoc gasicomitatum LMG 18811]
 gi|299887779|emb|CBL91747.1| Putative metalloprotease [Leuconostoc gasicomitatum LMG 18811]
          Length = 160

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 11/125 (8%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS----------DGCSSLML 101
            +  E+S+ F +S  I+  N EYRG+DKPT+V+SF                        +
Sbjct: 35  PDNTEMSVTFVNSDEIQRYNREYRGVDKPTDVISFALEEGDDTFDLSPEGDWADDIPKNI 94

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILE 160
           GDI+++ +II  +A+ LG  +E  L  L++HGFLHL GYDH+  D +   M  L+R IL+
Sbjct: 95  GDILVSVDIIASQADYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFDLQRKILD 154

Query: 161 DLGIN 165
           D G+ 
Sbjct: 155 DYGLK 159


>gi|126700056|ref|YP_001088953.1| hypothetical protein CD2440 [Clostridium difficile 630]
 gi|254976033|ref|ZP_05272505.1| hypothetical protein CdifQC_11999 [Clostridium difficile QCD-66c26]
 gi|255093421|ref|ZP_05322899.1| hypothetical protein CdifC_12284 [Clostridium difficile CIP 107932]
 gi|255101599|ref|ZP_05330576.1| hypothetical protein CdifQCD-6_12369 [Clostridium difficile
           QCD-63q42]
 gi|255307468|ref|ZP_05351639.1| hypothetical protein CdifA_12817 [Clostridium difficile ATCC 43255]
 gi|255315166|ref|ZP_05356749.1| hypothetical protein CdifQCD-7_12477 [Clostridium difficile
           QCD-76w55]
 gi|255517835|ref|ZP_05385511.1| hypothetical protein CdifQCD-_12036 [Clostridium difficile
           QCD-97b34]
 gi|255650951|ref|ZP_05397853.1| hypothetical protein CdifQCD_12241 [Clostridium difficile
           QCD-37x79]
 gi|260684020|ref|YP_003215305.1| hypothetical protein CD196_2285 [Clostridium difficile CD196]
 gi|260687680|ref|YP_003218814.1| hypothetical protein CDR20291_2332 [Clostridium difficile R20291]
 gi|306520831|ref|ZP_07407178.1| hypothetical protein CdifQ_14166 [Clostridium difficile QCD-32g58]
 gi|123362995|sp|Q182C6|RRMF_CLOD6 RecName: Full=Probable rRNA maturation factor
 gi|115251493|emb|CAJ69326.1| putative metal-dependent hydrolase [Clostridium difficile]
 gi|260210183|emb|CBA64380.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260213697|emb|CBE05571.1| conserved hypothetical protein [Clostridium difficile R20291]
          Length = 153

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS--SLMLGDIV 105
           Y   ++  E+SL F D+  I  LN EYRG+D+ T+VLSFP      +        LGDIV
Sbjct: 32  YEGYDDNYEVSLSFVDNKEIHELNREYRGVDRVTDVLSFPLLSDDFEDVELEEESLGDIV 91

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++ E    ++      FE  +  LI H   HLLGYDH  D++   M   E  IL  L I 
Sbjct: 92  VSLERALEQSIEYNHSFEREVCFLICHSMFHLLGYDHDTDENTKEMREKEEHILNKLNIT 151


>gi|28378612|ref|NP_785504.1| hypothetical protein lp_1969 [Lactobacillus plantarum WCFS1]
 gi|254556827|ref|YP_003063244.1| hypothetical protein JDM1_1660 [Lactobacillus plantarum JDM1]
 gi|300768140|ref|ZP_07078045.1| metal-dependent hydrolase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180768|ref|YP_003924896.1| hypothetical protein LPST_C1586 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|38258751|sp|Q88VR8|RRMF_LACPL RecName: Full=Probable rRNA maturation factor
 gi|28271448|emb|CAD64353.1| unknown [Lactobacillus plantarum WCFS1]
 gi|254045754|gb|ACT62547.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
 gi|300494204|gb|EFK29367.1| metal-dependent hydrolase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046259|gb|ADN98802.1| hypothetical protein LPST_C1586 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 159

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 10/132 (7%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC------- 96
           ++       +  E+S+   ++  I+ +N +YRG+D+PT+V+SF       D         
Sbjct: 27  LAGQTLKLRDDTEVSVTLMNNDAIQKINEQYRGVDRPTDVISFAMHDDDEDDLIVMDPEM 86

Query: 97  ---SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
                L LGDI+++ + +  +A  L       L +L++HGFLHL GYDH+   D   M  
Sbjct: 87  AAEMPLNLGDIMISVDKVSEQAAFLNHSEARELGYLVVHGFLHLNGYDHLQPADETEMFT 146

Query: 154 LERSILEDLGIN 165
           L+R IL+  G+ 
Sbjct: 147 LQRQILDAYGLE 158


>gi|288916972|ref|ZP_06411344.1| protein of unknown function UPF0054 [Frankia sp. EUN1f]
 gi|288351681|gb|EFC85886.1| protein of unknown function UPF0054 [Frankia sp. EUN1f]
          Length = 159

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 18/159 (11%)

Query: 15  IAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +A E+ +   DE+ L  L   V      N           + ELS++  +   +  L+  
Sbjct: 5   VANESGVTDFDEVTLAALARFVLDTMKVN----------PLAELSVMLVEVDAMTDLHVR 54

Query: 74  YRGIDKPTNVLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           Y G D PT+VL+FP   A         +   + +LGD+VL  E+   +A   G   E  L
Sbjct: 55  YMGEDGPTDVLAFPQDEAFEPSWSESVEEDPTTLLGDVVLCPEVARRQAGQAGHGMEREL 114

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L  HG LHLLGYDH + ++   M  L+ S+L    I 
Sbjct: 115 HILCTHGILHLLGYDHAEPEEEREMWKLQNSLLASWDIA 153


>gi|291287436|ref|YP_003504252.1| hypothetical protein Dacet_1527 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884596|gb|ADD68296.1| protein of unknown function UPF0054 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 151

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 12/154 (7%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + I  +   +G+        E VF             V  +  E+SL+ T   RI+ 
Sbjct: 2   EISILITDDTEAYGNSQLFSDCAEAVF---------SMLKVDFDDCEISLLLTTDDRIKE 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN EYR  D+ T+VLSFP   +        MLGDIV++ E  + +A+      +  +  L
Sbjct: 53  LNGEYRQKDRSTDVLSFPM--SEDPLSEGGMLGDIVISLETAKEQADEAAIMPDREIAFL 110

Query: 130 IIHGFLHLLGYDHVDD-KDACVMEGLERSILEDL 162
            IHG LHL+GY+H +D  +   M  L+  IL +L
Sbjct: 111 FIHGLLHLMGYEHENDPDEEEEMFDLQEEILRNL 144


>gi|258651805|ref|YP_003200961.1| hypothetical protein Namu_1577 [Nakamurella multipartita DSM 44233]
 gi|258555030|gb|ACV77972.1| protein of unknown function UPF0054 [Nakamurella multipartita DSM
           44233]
          Length = 186

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +  DEI L ++   V  +   N           + ELS++  D   +  L
Sbjct: 1   MTIEVANESGVPVDEIVLVSVARYVLDRMRIN----------PLAELSILLVDVEAMTEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + ++     PT+V+SFP             G    +LGD+VL   +   +A   G   ++
Sbjct: 51  HVKWMDEPGPTDVMSFPMDELDTARRPDESGPGPALLGDVVLCPAVAAEQATAAGHSVQD 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +      M  L+  +L+  
Sbjct: 111 ELHLLTVHGVLHLLGYDHAEPAQEREMFRLQNELLDTW 148


>gi|315925212|ref|ZP_07921426.1| metal dependent hydrolase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621446|gb|EFV01413.1| metal dependent hydrolase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 156

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/156 (33%), Positives = 72/156 (46%), Gaps = 9/156 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L I  EN    DE+    L   +       L S+   V + I+E+SL       I  LN 
Sbjct: 2   LTIQFENQT--DEVLSEALWAKMQTCIRKTLASENVLVDKLILEVSLTLVSPETIRMLNA 59

Query: 73  EYRGIDKPTNVLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            YRGID+ T+VLSFP                  ++LGDIVL       +    G  FE  
Sbjct: 60  NYRGIDRVTDVLSFPMLVFPEGMAALTAPSDLPILLGDIVLNPRRAAEQGETYGTGFERE 119

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           + +L +H  LHLLGYDH+D  D   M   E++I++D
Sbjct: 120 MCYLTVHSVLHLLGYDHMDPDDKQAMRAREKAIMDD 155


>gi|307155325|ref|YP_003890709.1| hypothetical protein Cyan7822_5562 [Cyanothece sp. PCC 7822]
 gi|306985553|gb|ADN17434.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 7822]
          Length = 181

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F   +  L++       +  ELSL  TD   I+  N +YR  ++PT+VL+F     
Sbjct: 41  WESWFQIWLEMLVAA--LPSSDSYELSLRLTDDQEIQYYNAQYRHKNQPTDVLAFAALEV 98

Query: 92  S------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                        L LGDI+++ E    +A   G      L +L  HGFLHLLG+DH DD
Sbjct: 99  EVPYQIDEFSDEPLYLGDIIISVETASRQATEQGHSLTRELANLAAHGFLHLLGWDHPDD 158

Query: 146 KDACVMEGLERSILEDL 162
           +    M   +  +L  L
Sbjct: 159 ESLMAMLSQQEILLNHL 175


>gi|225021772|ref|ZP_03710964.1| hypothetical protein CORMATOL_01800 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305681061|ref|ZP_07403868.1| translation metalloprotein YbeY [Corynebacterium matruchotii ATCC
           14266]
 gi|224945468|gb|EEG26677.1| hypothetical protein CORMATOL_01800 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305659266|gb|EFM48766.1| translation metalloprotein YbeY [Corynebacterium matruchotii ATCC
           14266]
          Length = 205

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 18/157 (11%)

Query: 11  LDLQIAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + +++  E+   G +E  L  +   V  +   +             E+++   D   +  
Sbjct: 1   MSIEVVNESGYDGVNEESLADVATFVLREMDIH----------PSAEVTVSVVDVPTMSE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           L+  + G++ PT+V+SFP            S G    MLGDI+L  E    +A   G + 
Sbjct: 51  LHLRWMGLEGPTDVMSFPMDELTPNMGRPDSAGFGPAMLGDIILCPEFAHKQATKAGHDL 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            + L  L  HG LHLLGYDH+  +    M  L+  +L
Sbjct: 111 GHELCLLTTHGCLHLLGYDHITPEQEQKMFALQNELL 147


>gi|87123560|ref|ZP_01079411.1| hypothetical protein RS9917_06855 [Synechococcus sp. RS9917]
 gi|86169280|gb|EAQ70536.1| hypothetical protein RS9917_06855 [Synechococcus sp. RS9917]
          Length = 196

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 2/131 (1%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
             +   +A + L   G       + L L F D   I  LN  +R   K T+VLSF     
Sbjct: 43  AWLTLLRADTELTCPGPVRTAQAISLGLQFCDDATIAALNGTWRQKPKATDVLSFAALDG 102

Query: 92  SSDGCSSL--MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                 +    LGDI+++ +    +A   G    + L  L+ HG LHLLG+DH D+    
Sbjct: 103 DGPMPDAPCVELGDIIVSVDTAGRQAMEQGHGLVHELRWLVSHGLLHLLGWDHPDEAQLT 162

Query: 150 VMEGLERSILE 160
            M   +  +L 
Sbjct: 163 AMLQCQERLLA 173


>gi|15841879|ref|NP_336916.1| putative metalloprotease [Mycobacterium tuberculosis CDC1551]
 gi|167968755|ref|ZP_02551032.1| hypothetical protein MtubH3_12240 [Mycobacterium tuberculosis
           H37Ra]
 gi|215404293|ref|ZP_03416474.1| putative metalloprotease [Mycobacterium tuberculosis 02_1987]
 gi|215412113|ref|ZP_03420877.1| putative metalloprotease [Mycobacterium tuberculosis 94_M4241A]
 gi|215427743|ref|ZP_03425662.1| putative metalloprotease [Mycobacterium tuberculosis T92]
 gi|215431307|ref|ZP_03429226.1| putative metalloprotease [Mycobacterium tuberculosis EAS054]
 gi|215446611|ref|ZP_03433363.1| putative metalloprotease [Mycobacterium tuberculosis T85]
 gi|218754095|ref|ZP_03532891.1| putative metalloprotease [Mycobacterium tuberculosis GM 1503]
 gi|219558359|ref|ZP_03537435.1| putative metalloprotease [Mycobacterium tuberculosis T17]
 gi|254232509|ref|ZP_04925836.1| hypothetical protein TBCG_02311 [Mycobacterium tuberculosis C]
 gi|254365144|ref|ZP_04981190.1| hypothetical protein TBHG_02306 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551414|ref|ZP_05141861.1| putative metalloprotease [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187370|ref|ZP_05764844.1| putative metalloprotease [Mycobacterium tuberculosis CPHL_A]
 gi|260201491|ref|ZP_05768982.1| putative metalloprotease [Mycobacterium tuberculosis T46]
 gi|260205668|ref|ZP_05773159.1| putative metalloprotease [Mycobacterium tuberculosis K85]
 gi|294994529|ref|ZP_06800220.1| putative metalloprotease [Mycobacterium tuberculosis 210]
 gi|297634969|ref|ZP_06952749.1| putative metalloprotease [Mycobacterium tuberculosis KZN 4207]
 gi|297731961|ref|ZP_06961079.1| putative metalloprotease [Mycobacterium tuberculosis KZN R506]
 gi|298525849|ref|ZP_07013258.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|313659295|ref|ZP_07816175.1| metal-binding heat shock protein [Mycobacterium tuberculosis KZN
           V2475]
 gi|54040529|sp|P67135|RRMF_MYCBO RecName: Full=Probable rRNA maturation factor
 gi|54042953|sp|P67134|RRMF_MYCTU RecName: Full=Probable rRNA maturation factor
 gi|171704548|sp|A1KL57|RRMF_MYCBP RecName: Full=Probable rRNA maturation factor
 gi|172048108|sp|A5U560|RRMF_MYCTA RecName: Full=Probable rRNA maturation factor
 gi|13882146|gb|AAK46730.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124601568|gb|EAY60578.1| hypothetical protein TBCG_02311 [Mycobacterium tuberculosis C]
 gi|134150658|gb|EBA42703.1| hypothetical protein TBHG_02306 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|298495643|gb|EFI30937.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 177

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +   E  L ++   V AK   N             ELS++  D+  +  L
Sbjct: 1   MSIEVANESGIDVSEAELVSVARFVIAKMDVN----------PCAELSMLLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAEQAAAAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 111 ELALLTIHGVLHLLGYDHAEPDEEKEMFALQDRLLEEW 148


>gi|170782109|ref|YP_001710442.1| putative metalloprotease [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189038996|sp|B0RCR5|RRMF_CLAMS RecName: Full=Probable rRNA maturation factor
 gi|169156678|emb|CAQ01836.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 153

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E+A+  DE  ++ L                        EL++V  D   +E L
Sbjct: 1   MSIEINNESAVEVDEPLIQRLATYALDT----------LHVHPDAELAIVMVDEGAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++     PT+VLSFP              + +LGDIV+  ++   +A   G      +
Sbjct: 51  HVQWMDEPGPTDVLSFPMDELRPGTEDRPTPAGLLGDIVVCPQVAAEQAVTAGHSTMEEI 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLG+DH +  +   M GL+R IL
Sbjct: 111 LLLTAHGILHLLGFDHAEPDEEREMFGLQRDIL 143


>gi|191638507|ref|YP_001987673.1| Putative metalloprotease LSEI_1518 [Lactobacillus casei BL23]
 gi|238693043|sp|B3WEL4|RRMF_LACCB RecName: Full=Probable rRNA maturation factor
 gi|190712809|emb|CAQ66815.1| Putative metalloprotease LSEI_1518 [Lactobacillus casei BL23]
 gi|327385739|gb|AEA57213.1| Probable rRNA maturation factor [Lactobacillus casei BD-II]
          Length = 152

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD- 94
             K +     K   + EN  E+S+       IE +N EYR  D+ T+V+SF       D 
Sbjct: 19  LIKKLVAFCGKQLKLPEN-TEMSITLVGDDEIERINREYRETDRVTDVISFAIEEGEDDL 77

Query: 95  ---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                 +  +GD+ +    +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM
Sbjct: 78  PLLPGMAKNIGDLFIDPLTVRRHAEEYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVM 137

Query: 152 EGLERSILEDLGIN 165
             L++ IL   G+ 
Sbjct: 138 IPLQKKILAAYGLT 151


>gi|317500212|ref|ZP_07958443.1| hypothetical protein HMPREF1026_00385 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087560|ref|ZP_08336491.1| metalloprotease [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898383|gb|EFV20423.1| hypothetical protein HMPREF1026_00385 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330400700|gb|EGG80304.1| metalloprotease [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 164

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 21/154 (13%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             R + E+V   ++       Y       E+SL+ T    I+ +N   R ID+ T+VLSF
Sbjct: 16  DARKIAELVIETSLD------YVKCPYETEVSLLLTTDEEIKEINRMQRQIDRATDVLSF 69

Query: 87  PTAFASSDG---------------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
           P A   + G                  LMLGDIV++ + +  +A   G         LI 
Sbjct: 70  PMADYETPGDFSHLDEDAGLFHPDTGELMLGDIVISVDKVFEQAEEYGHSLLREYAFLIA 129

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           H  LHL GYDH+++ +   ME  ++ I+E + I 
Sbjct: 130 HSMLHLFGYDHMEEVERKEMEMHQKKIMELVNIT 163


>gi|154487439|ref|ZP_02028846.1| hypothetical protein BIFADO_01291 [Bifidobacterium adolescentis
           L2-32]
 gi|154083957|gb|EDN83002.1| hypothetical protein BIFADO_01291 [Bifidobacterium adolescentis
           L2-32]
          Length = 181

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP          + M   LGDIVL   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGGTEMEGVLGDIVLCPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|78223573|ref|YP_385320.1| hypothetical protein Gmet_2370 [Geobacter metallireducens GS-15]
 gi|123742815|sp|Q39T29|RRMF_GEOMG RecName: Full=Probable rRNA maturation factor
 gi|78194828|gb|ABB32595.1| protein of unknown function UPF0054 [Geobacter metallireducens
           GS-15]
          Length = 150

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 5/129 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             K    ++S    +     ELS+V T    I  +N EY   D+PTNV+SF  A      
Sbjct: 19  LRKVAERILSA---LGYPDSELSVVITGDLGIRRVNREYLHKDRPTNVISFAMAEGEFGA 75

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEG 153
            +  MLGD++++ +    EA   G  F + L  L++HG LH+ GYDH    + +A  ME 
Sbjct: 76  LNPAMLGDVIISADTAAREAEEGGVSFWSRLCFLLLHGILHITGYDHERSGEAEARRMEA 135

Query: 154 LERSILEDL 162
            ER I   L
Sbjct: 136 KEREIFAIL 144


>gi|38234288|ref|NP_940055.1| putative metalloprotease [Corynebacterium diphtheriae NCTC 13129]
 gi|59799118|sp|Q6NG17|RRMF_CORDI RecName: Full=Probable rRNA maturation factor
 gi|38200551|emb|CAE50246.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
          Length = 196

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 16/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+    D ++   L +V            G        E ++   D   +  L
Sbjct: 1   MSIEVVNESGF--DGVNEEALIDVA-------TFVLGEMDVHPDAEATISVVDVATMSDL 51

Query: 71  NFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +  +  ++ PT+V+SFP            +      MLGDI+L  E    +A   G +  
Sbjct: 52  HVRWMDLEGPTDVMSFPMDELTPGMGRPDAQPFGPAMLGDIILCPEFAAKQAAKAGHDMG 111

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L  L  HG LHLLGYDH++ +D   M  L+  +L+D 
Sbjct: 112 HELALLTTHGCLHLLGYDHIEPEDEQEMFALQNELLQDW 150


>gi|75908994|ref|YP_323290.1| putative metalloprotease [Anabaena variabilis ATCC 29413]
 gi|123609226|sp|Q3M9E1|RRMF_ANAVT RecName: Full=Probable rRNA maturation factor
 gi|75702719|gb|ABA22395.1| Protein of unknown function UPF0054 [Anabaena variabilis ATCC
           29413]
          Length = 176

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 16  AVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           A + + + D        E  F + +  L S          E+ L  TD   I+ +N +YR
Sbjct: 19  AAQASGYIDSQVSSATWEDWFHRWLEILDSS--LPPAPSYEIGLRLTDDTEIQAINAQYR 76

Query: 76  GIDKPTNVLSFPTAFASSDG-----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
             +KPT+VL+F    A            L LGDIV++    + +A          L  L 
Sbjct: 77  QQNKPTDVLAFAALEADLPQNPEMVAEPLYLGDIVVSINTAQRQAGQQEHSLSTELAWLT 136

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            HG LHLLG+DH D++    M   +  +L+ +GI 
Sbjct: 137 AHGLLHLLGWDHPDEESLIAMLQQQVVLLDAVGIK 171


>gi|331701378|ref|YP_004398337.1| metalloprotease ybeY [Lactobacillus buchneri NRRL B-30929]
 gi|329128721|gb|AEB73274.1| metalloprotease ybeY [Lactobacillus buchneri NRRL B-30929]
          Length = 161

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 19/167 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL+I  +      E   + + +V+         +  Y    +  E+S+   ++  I  +
Sbjct: 1   MDLEIYDKTEKGVSEKDQKLIRDVL-------EFAGSYIHLADNTEMSMTLVNNDEIHQI 53

Query: 71  NFEYRGIDKPTNVLSFPTA------------FASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           N +YRG+D+ T+V+SF                          +GDI ++ + +  +A+ L
Sbjct: 54  NKKYRGVDRATDVISFAIEDDDDDDDFPIVMDEELKESIPENIGDIFVSVDKVAEQADYL 113

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G  FE  L  L +HGFLHL GYDH+   DA VM  L++ IL   G+ 
Sbjct: 114 GHSFERELGFLCVHGFLHLNGYDHMKKADADVMFPLQKEILNAYGLK 160


>gi|148272750|ref|YP_001222311.1| putative metalloprotease [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166231413|sp|A5CRB1|RRMF_CLAM3 RecName: Full=Probable rRNA maturation factor
 gi|147830680|emb|CAN01620.1| putative metal-dependent hydrolase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 153

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E+A+  DE  ++ L                        EL++V  D   +E L
Sbjct: 1   MSIEINNESAIEVDEPVIQRLVTYALDT----------LHVHPDAELAIVMVDEGAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++     PT+VLSFP              + +LGDIV+  ++   +A   G      +
Sbjct: 51  HVQWMDEPGPTDVLSFPMDELRPGTEDRPTPAGLLGDIVVCPQVAAEQAVTAGHSTMEEI 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLG+DH +  +   M GL+R IL
Sbjct: 111 LLLTAHGILHLLGFDHAEPDEEREMFGLQRDIL 143


>gi|187778471|ref|ZP_02994944.1| hypothetical protein CLOSPO_02065 [Clostridium sporogenes ATCC
           15579]
 gi|187772096|gb|EDU35898.1| hypothetical protein CLOSPO_02065 [Clostridium sporogenes ATCC
           15579]
          Length = 166

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 19/158 (12%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DEI +    E    + +   + +     +   E+S+VF D++ I+ +N +YR IDK T+V
Sbjct: 9   DEIKVNEEFENKIKEIIDYALKEERVNID--YEISVVFIDNNSIKEINKDYRNIDKVTDV 66

Query: 84  LSFPT----------------AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LSFP                  F  SD    +L+LGDI L+ E  E ++      F    
Sbjct: 67  LSFPMLDYEEGKVFKDIYLNYEFDESDLDEGNLVLGDIALSLEKAEEQSKEFEHSFLRET 126

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +L IH  LHLLGYDH+ + +  +M   E  IL++  +
Sbjct: 127 CYLTIHSVLHLLGYDHIKEDEKAIMRQREEEILKNFNL 164


>gi|169351077|ref|ZP_02868015.1| hypothetical protein CLOSPI_01856 [Clostridium spiroforme DSM 1552]
 gi|169292139|gb|EDS74272.1| hypothetical protein CLOSPI_01856 [Clostridium spiroforme DSM 1552]
          Length = 152

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--MLG 102
           +       + +ELS +  D  +I  +N EYR ID+ T+V+SF    +       +   +G
Sbjct: 29  ASKQLEISDDLELSCILVDDQKIHEINKEYRNIDRATDVISFALEDSEQYYVEGMARNIG 88

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI ++ +   ++AN  G   +  +  L  HG LHLLG+DH++ +D   M  +++ IL  L
Sbjct: 89  DIFISVDHALMQANEYGHSLKREMCFLFTHGLLHLLGFDHMEKEDEEKMIAMQKKILNAL 148

Query: 163 GIN 165
            I 
Sbjct: 149 KIE 151


>gi|116617889|ref|YP_818260.1| metal-dependent hydrolase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271910|sp|Q03Y35|RRMF_LEUMM RecName: Full=Probable rRNA maturation factor
 gi|116096736|gb|ABJ61887.1| Predicted metal-dependent hydrolase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 160

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 11/132 (8%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----- 99
           +  Y    +  E+S+ F ++  I   N +YRGIDKPT+V+SF       D          
Sbjct: 28  AGKYLELPDNTEMSVTFMNNEEIHQYNKKYRGIDKPTDVISFAIEEDGDDLPVLPDELMD 87

Query: 100 -----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEG 153
                 +GDI+++ +II  +A  LG  +E  L  L++HGFLHL GYDH+  D +   M  
Sbjct: 88  AELAKNIGDILVSVDIINSQAEYLGHSYERELGFLVVHGFLHLNGYDHMLGDAEEKEMFD 147

Query: 154 LERSILEDLGIN 165
           L+R IL++ G+ 
Sbjct: 148 LQREILDNYGLK 159


>gi|306819834|ref|ZP_07453488.1| possible metal-dependent hydrolase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304552081|gb|EFM40018.1| possible metal-dependent hydrolase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 158

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 9/136 (6%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             K +S    +     +N  E+SL FTD+  I  +N EYR ID  T+VLSFP        
Sbjct: 23  IEKVISECEDEEGLNFDN--EISLTFTDNENIRQINKEYRDIDDKTDVLSFPMYEIEDLE 80

Query: 96  CSSL-------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                       LGDIV++ E  + +A   G  FE  + +LI H   HL+GYDH+ D + 
Sbjct: 81  EEKKSKSKNLKPLGDIVISMEQADEQAKQFGHSFEREVCYLICHSMFHLMGYDHMTDDEK 140

Query: 149 CVMEGLERSILEDLGI 164
            +M   E  I+  L I
Sbjct: 141 KIMREKEEKIMTKLNI 156


>gi|182418401|ref|ZP_02949695.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237666831|ref|ZP_04526816.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182377783|gb|EDT75327.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237658030|gb|EEP55585.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 168

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 19/158 (12%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +I +    E    K +   + +     E   E+SL+F D+  I  +N E R ID+ T+VL
Sbjct: 10  KIEVDNRLEEELKKVIEFALKEEEV--EIPCEVSLLFVDNEEIREINNETRNIDRETDVL 67

Query: 85  SFPT----------------AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           SFP                  F+ SD     L+LGDIVL+ E    ++      FE    
Sbjct: 68  SFPMLDYDNKKIFKEMYKGYEFSQSDFDGEELVLGDIVLSLEKALEQSLEFNHSFEREAS 127

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +L++H  LHLLGYDH++++D  +M   E  IL +L I 
Sbjct: 128 YLVVHSVLHLLGYDHMEEEDKVIMRKREEEILNELNIT 165


>gi|291545856|emb|CBL18964.1| conserved hypothetical protein TIGR00043 [Ruminococcus sp. SR1/5]
          Length = 164

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 17/158 (10%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVE--LSLVFTDSHRIETLNFEYRGIDKPTN 82
           E        + +A   S +  K   +++   +  ++LV TD+  I+ +N E+R I  PT+
Sbjct: 6   EYETDQELGIDYAALASQVADKVLEMEKCPYDGQVNLVLTDNEEIKRVNTEFRNIQAPTD 65

Query: 83  VLSFPTAFASSD---------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           VLSFP     +                    L+LGDI+++   +  +A   G        
Sbjct: 66  VLSFPMIPFETPADYSVVEEDESYFDLDSDELLLGDIMISVPKVFAQAEEYGHSVTREFC 125

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            L+ H  LHLLGYDH+ + +A VME  + + L++LGIN
Sbjct: 126 FLVAHSMLHLLGYDHMTEDEAKVMEAKQAAALKELGIN 163


>gi|58040435|ref|YP_192399.1| hypothetical protein GOX2007 [Gluconobacter oxydans 621H]
 gi|62901405|sp|Q5FPF3|RRMF_GLUOX RecName: Full=Probable rRNA maturation factor
 gi|58002849|gb|AAW61743.1| Hypothetical protein GOX2007 [Gluconobacter oxydans 621H]
          Length = 168

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
            I +E+A W   +      E    +A+  +  +G          S++      ++ LN  
Sbjct: 11  DIIIEDARWRASVPG---TERAIRRALVAVARQGGPDFTQSPAPSILLATDRIVKRLNAR 67

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           +R  +KPTNVL+F       +  S +  GDIVL YE +  EA    +    HL HL++HG
Sbjct: 68  FRDKNKPTNVLTF-------EPLSPMHGGDIVLGYETVRREAAAARRSLRAHLSHLVVHG 120

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            LHL GYDH    +A  MEG+E   L  LG  DP+ 
Sbjct: 121 ALHLAGYDHHHPGEAREMEGIETRTLRSLGFGDPWR 156


>gi|119025739|ref|YP_909584.1| putative metalloprotease [Bifidobacterium adolescentis ATCC 15703]
 gi|145558837|sp|A1A1B9|RRMF_BIFAA RecName: Full=Probable rRNA maturation factor
 gi|118765323|dbj|BAF39502.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 181

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP          + M   LGDIVL   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGGTEMEGVLGDIVLCPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|118443989|ref|YP_878555.1| metalloprotease [Clostridium novyi NT]
 gi|145572747|sp|A0Q1Q3|RRMF_CLONN RecName: Full=Probable rRNA maturation factor
 gi|118134445|gb|ABK61489.1| conserved hypothetical protein [Clostridium novyi NT]
          Length = 166

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 24/165 (14%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           ++ +  DE  L TL E++        +           E+S++  D+  I+ +N E R I
Sbjct: 8   QDKIKIDEKTLNTLDEIIKYALKEEEVYVN-------TEVSVILIDNDTIKEINKETRDI 60

Query: 78  DKPTNVLSFPTAFASSD-----------------GCSSLMLGDIVLAYEIIEIEANVLGK 120
           DK T+VLSFP                            L+LGDIVL+ E  E ++   G 
Sbjct: 61  DKVTDVLSFPMLDYPKGKTYKEVYKDYEFDASYLDEGELVLGDIVLSLERAEEQSKEFGH 120

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            F   + +L IH  LHLLGYDH++D +  +M   E  IL    I 
Sbjct: 121 SFLREVCYLTIHSVLHLLGYDHMEDDEKAIMRKREEEILNKFSIK 165


>gi|15673068|ref|NP_267242.1| putative metalloprotease [Lactococcus lactis subsp. lactis Il1403]
 gi|281491585|ref|YP_003353565.1| hypothetical protein LLKF_1113 [Lactococcus lactis subsp. lactis
           KF147]
 gi|29428253|sp|Q9CGL0|RRMF_LACLA RecName: Full=Probable rRNA maturation factor
 gi|12724042|gb|AAK05184.1|AE006341_3 hypothetical protein L94534 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281375303|gb|ADA64816.1| Hypothetical protein LLKF_1113 [Lactococcus lactis subsp. lactis
           KF147]
 gi|326406636|gb|ADZ63707.1| Putative metalloprotease [Lactococcus lactis subsp. lactis CV56]
          Length = 162

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 22/169 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E      EI  +T   + FA    NL        +   E+S+ F D+ R   L
Sbjct: 1   MYVELVDETGQVPSEIIEQTKEVLAFAAKKLNL--------KESTEMSVTFVDNARSHEL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSS--------------LMLGDIVLAYEIIEIEAN 116
           N +YR  D+PT+V+S       S+                    +G++ ++ +    +A 
Sbjct: 53  NLQYRETDRPTDVISLEYKPDESEFFFDEDMELPEELLEEMDPFIGELFISIDKAAEQAA 112

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E     L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 113 DYGHSIEREYGWLAVHGFLHINGYDHYTPEEESEMFGLQEEILTAYGLT 161


>gi|308189661|ref|YP_003922592.1| transcriptional regulator [Mycoplasma fermentans JER]
 gi|319776821|ref|YP_004136472.1| putative metalloprotease [Mycoplasma fermentans M64]
 gi|307624403|gb|ADN68708.1| putative transcriptional regulator [Mycoplasma fermentans JER]
 gi|318037896|gb|ADV34095.1| Putative metalloprotease [Mycoplasma fermentans M64]
          Length = 151

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L E  + + + NL  +  F     V + +  T++  I+ LN EYR  D PT++LSF    
Sbjct: 15  LFEKEYKQILENLAKE--FGLNQTVSVDVTITNNDEIQKLNKEYRNKDYPTDILSFGLED 72

Query: 91  AS-SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
               +      LG++V+++E +E +A   G        +L  HG +HL+GYDH  + +  
Sbjct: 73  WELFENMPIYPLGELVISHEKVEAQAQEFGHSIRREYCYLFAHGLIHLMGYDHETEVERA 132

Query: 150 VMEGLERSILEDLGIN 165
            M  L   I E L I+
Sbjct: 133 EMNKLVDLIFEPLKIS 148


>gi|212716038|ref|ZP_03324166.1| hypothetical protein BIFCAT_00950 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661405|gb|EEB21980.1| hypothetical protein BIFCAT_00950 [Bifidobacterium catenulatum DSM
           16992]
          Length = 181

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP               +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGRTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +    M GL+R +L
Sbjct: 96  QQALAAGHSTMEEMMLLTIHGILHLLGYDHATPEQERQMFGLQRQLL 142


>gi|300310056|ref|YP_003774148.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1]
 gi|300072841|gb|ADJ62240.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1]
          Length = 151

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 13/163 (7%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +P+  L ++V+   + DE   +T+   +  + V   +           +L+L F  S   
Sbjct: 1   MPKHKLTLSVQ---YADERLKKTITTTLLRRWVQAALFA-------PAQLTLRFVGSEEG 50

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             LN +YRG D  TNVL+F          +     DI+   +++E EA    K  E H  
Sbjct: 51  RDLNRDYRGKDYATNVLTFAYTEDEDSEVTEA---DIIFCTDVLEKEAAEQKKSVEEHTA 107

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           HL++HG LH  GYDH DD++A  ME LE  IL  LG  +PY  
Sbjct: 108 HLVVHGVLHAQGYDHEDDEEADEMEALETEILAGLGYANPYAA 150


>gi|227548791|ref|ZP_03978840.1| metalloprotease [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079121|gb|EEI17084.1| metalloprotease [Corynebacterium lipophiloflavum DSM 44291]
          Length = 187

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-------CSSLMLGDIVL 106
             E+++   D   +  L+  +  ++ PT+V+SFP    +  G           MLGDI+L
Sbjct: 35  DTEVTVTLVDEPTMADLHVRWMDLEGPTDVMSFPMDELTPGGGRPDAAQPGPAMLGDIIL 94

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
                  +A + G +  + L  L +HG LHLLGYDHV  +D   M  L+  IL D 
Sbjct: 95  CPAFDRRQAEIAGHDLGHELALLTVHGVLHLLGYDHVAPEDEREMFSLQNEILADW 150


>gi|213965812|ref|ZP_03394004.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
 gi|213951571|gb|EEB62961.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
          Length = 177

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+    +E  L  +               G        ELS+   D   IE L
Sbjct: 1   MSIEVFNESGQGVNEESLIDVARYAL----------GRLDVHPAAELSIHIVDLKTIEDL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +  +  +  PT+V+SFP            +      MLGDIVL  E    +A   G    
Sbjct: 51  HVRWLDLPGPTDVMSFPMDELTPGSGRPDAASPGPAMLGDIVLCPEFAAGQAERAGHPLS 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + LV L +HG LHLLGYDHV  ++   M  L+  +L D 
Sbjct: 111 HELVLLTVHGVLHLLGYDHVTAEEERQMFSLQNGLLADW 149


>gi|218189024|gb|EEC71451.1| hypothetical protein OsI_03674 [Oryza sativa Indica Group]
          Length = 593

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N     +I L  L +  +    +++   G + K   VE+S++  + + I+ LN E+RG D
Sbjct: 138 NVPMAMKIALDGLLDSNYKTRDTSISDVGRYDK---VEVSVLLCNDNFIQNLNKEWRGED 194

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
               +LS        D    LMLGDIV++ E    +A   G    + +  L + G L LL
Sbjct: 195 SCIEMLSMSQYIPDLD-VPILMLGDIVISVETAARQAEERGHTLLDEVRILAVRGILRLL 253

Query: 139 GYDHVD-DKDACVMEGLERSILEDL 162
           G+DH   D+ A  ME  E+ IL+ L
Sbjct: 254 GFDHQTSDESAVEMEKEEQLILKSL 278


>gi|255656420|ref|ZP_05401829.1| hypothetical protein CdifQCD-2_12149 [Clostridium difficile
           QCD-23m63]
 gi|296450133|ref|ZP_06891894.1| metal-dependent hydrolase [Clostridium difficile NAP08]
 gi|296878514|ref|ZP_06902519.1| metal-dependent hydrolase [Clostridium difficile NAP07]
 gi|296260896|gb|EFH07730.1| metal-dependent hydrolase [Clostridium difficile NAP08]
 gi|296430321|gb|EFH16163.1| metal-dependent hydrolase [Clostridium difficile NAP07]
          Length = 153

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           ++ L   E  L  + +++            Y   ++  E+SL F D+  I  LN EYRG+
Sbjct: 9   QDKLEVSEELLEKIKDIILE-------CLDYEGYDDNYEVSLSFVDNKEIHELNREYRGV 61

Query: 78  DKPTNVLSFPTAFASSDGCS--SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
           D+ T+VLSFP      +        LGDIV++ E    ++      FE  +  LI H   
Sbjct: 62  DRVTDVLSFPLLSDDFEDVELEEESLGDIVVSLERALEQSIEYNHSFEREVCFLICHSMF 121

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HLLGYDH  D++   M   E  IL  L I 
Sbjct: 122 HLLGYDHDTDENTKEMREKEEHILNKLNIT 151


>gi|242061044|ref|XP_002451811.1| hypothetical protein SORBIDRAFT_04g008060 [Sorghum bicolor]
 gi|241931642|gb|EES04787.1| hypothetical protein SORBIDRAFT_04g008060 [Sorghum bicolor]
          Length = 457

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 10  RLDLQIAVENALWGDEI------HLRTLCEVVFAKAVSNLISKGYFVKENIV-------- 55
            L +QI +E AL  D         LRT        A+++L    Y  ++  V        
Sbjct: 93  ELSVQIGIEEALPDDPEILGIAETLRTDVGKAVKLALNDLEGSDYITRDPSVCNVNKYAS 152

Query: 56  -ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+SL+  D   I  LN E+R  D  T+VLS        D    L LGDIV++ E    +
Sbjct: 153 IEVSLLLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPELD-IPILQLGDIVISVETARRQ 211

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           A   G    + +  L++HG LHLLG+DH 
Sbjct: 212 AEERGHTLLDEIRILMVHGLLHLLGFDHE 240


>gi|153953547|ref|YP_001394312.1| metalloprotease [Clostridium kluyveri DSM 555]
 gi|219854169|ref|YP_002471291.1| hypothetical protein CKR_0826 [Clostridium kluyveri NBRC 12016]
 gi|189040636|sp|A5N6N3|RRMF_CLOK5 RecName: Full=Probable rRNA maturation factor
 gi|254806620|sp|B9E052|RRMF_CLOK1 RecName: Full=Probable rRNA maturation factor
 gi|146346428|gb|EDK32964.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219567893|dbj|BAH05877.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 164

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+I +    E +   ++   + +         E+S+VF D+  I+ +N E R ID+ T+V
Sbjct: 9   DKIEVTDKLEKIVTSSIECALKEEKVNFP--CEISVVFVDNENIKDINRENRNIDRVTDV 66

Query: 84  LSFPTAFASS-----------------DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LSFP                           +L+LGDIV++ E  E ++   G  F    
Sbjct: 67  LSFPMLEYPESKVFKEVYLNYKFPEYDMNDGNLVLGDIVVSLEKCEEQSREFGHSFFRET 126

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +LI+H  LHLLGYDH +D D  +M   E  IL+ 
Sbjct: 127 CYLIVHSVLHLLGYDHTEDSDKKIMREREEYILKK 161


>gi|307293144|ref|ZP_07572990.1| protein of unknown function UPF0054 [Sphingobium chlorophenolicum
           L-1]
 gi|306881210|gb|EFN12426.1| protein of unknown function UPF0054 [Sphingobium chlorophenolicum
           L-1]
          Length = 166

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 6/162 (3%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +++AV +     +     L +     A+ +     +   E + E+++  T    +  LN 
Sbjct: 2   IEVAVLHEQGWPDTDWELLAQRAVVAAIMHSPYAAFAADEALYEVAVKLTSDEEVHQLNR 61

Query: 73  EYRGIDKPTNVLSFPT------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            YR  DKPTNVLSFP          ++     ++LGDIVLA  +   EA   G    +H 
Sbjct: 62  AYRDKDKPTNVLSFPMVQADLLEATANTDDGEVILGDIVLAEGVCAAEAAEKGISVADHA 121

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            HLI+HG  HLLGYDH++D +A  ME LE   L  LGI+DPY
Sbjct: 122 THLIVHGTFHLLGYDHMEDAEAEAMEALETQSLVSLGISDPY 163


>gi|253681848|ref|ZP_04862645.1| conserved hypothetical protein YbeY [Clostridium botulinum D str.
           1873]
 gi|253561560|gb|EES91012.1| conserved hypothetical protein YbeY [Clostridium botulinum D str.
           1873]
          Length = 166

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 24/165 (14%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           ++ +  DE  L T+ E++      N   K   VK N  E+S++F D++ I+ +N E R I
Sbjct: 8   QDKINIDEKILETVKEII------NYTLKEEEVKVN-TEVSVIFIDNNTIKEINKETRDI 60

Query: 78  DKPTNVLSFPTAFASSD-----------------GCSSLMLGDIVLAYEIIEIEANVLGK 120
           DK T+VLSFP                            L+LGDIVL+ E  E ++     
Sbjct: 61  DKVTDVLSFPMLDYPQGKVYKDTYKDYEFDASYLDEGELVLGDIVLSLEKAEEQSTEFRH 120

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            F   + +L +H  LHLLGYDH++D D   M   E  ILE   I 
Sbjct: 121 SFLREVCYLTVHSVLHLLGYDHMEDDDKVRMRKREEEILERFSIT 165


>gi|153816465|ref|ZP_01969133.1| hypothetical protein RUMTOR_02718 [Ruminococcus torques ATCC 27756]
 gi|145846207|gb|EDK23125.1| hypothetical protein RUMTOR_02718 [Ruminococcus torques ATCC 27756]
          Length = 160

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 21/154 (13%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             R + E+V   ++       Y       E+SL+ T    I+ +N   R ID+ T+VLSF
Sbjct: 12  DARKIAELVIETSLD------YVKCPYETEVSLLLTTDEEIKEINRMQRQIDRATDVLSF 65

Query: 87  PTAFASSDG---------------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
           P A   + G                  LMLGDIV++ + +  +A   G         LI 
Sbjct: 66  PMADYETPGDFSHLDEDAGLFHPDTGELMLGDIVISVDKVFEQAEEYGHSLLREYAFLIA 125

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           H  LHL GYDH+++ +   ME  ++ I+E + I 
Sbjct: 126 HSMLHLFGYDHMEEVERKEMEMHQKKIMELVNIT 159


>gi|170741365|ref|YP_001770020.1| hypothetical protein M446_3180 [Methylobacterium sp. 4-46]
 gi|168195639|gb|ACA17586.1| protein of unknown function UPF0054 [Methylobacterium sp. 4-46]
          Length = 159

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 10/159 (6%)

Query: 12  DLQIAVENALWGDEI-HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++ + +E+  W   I  L          A++ L           VE+S++ TD   ++ L
Sbjct: 4   EIDVVLEDERWEAAIPDLGPFVRRAVEAALAILPPAE------AVEVSVLLTDDEAVQEL 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +RG DKPTNVLSFP   A   G +   LGD+VLAY+ +  E+    K   +HL HL+
Sbjct: 58  NRTWRGKDKPTNVLSFPAGHA--HGGAPRPLGDVVLAYDTMLRESGEQSKPLGHHLAHLL 115

Query: 131 IHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
           +HG LHLLG DH   + +A  ME LE + L  LG+ DPY
Sbjct: 116 VHGTLHLLGQDHETGEAEAEAMEALEAAALARLGVPDPY 154


>gi|113866555|ref|YP_725044.1| unkown domain/putative metalloprotease fusion protein [Ralstonia
           eutropha H16]
 gi|113525331|emb|CAJ91676.1| diacylglycerol kinase [Ralstonia eutropha H16]
          Length = 248

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 12/159 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L++ ++N        +     +   + +   +    +       L++ F D     TLN 
Sbjct: 99  LELEIQNGD-----GVGKRAGLPPRRKIETWVKSALYADAA---LTIRFVDEEEGRTLNR 150

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            YRG D  TNVL+F  A    D  +    GDIVL   ++E EA    K  E H  HLI+H
Sbjct: 151 TYRGKDYATNVLTFAYAENEEDPVT----GDIVLCCPVVETEAREQRKPLEAHYAHLIVH 206

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           G LH  GY+H +D +A  ME +E   L+ LG  DPY+ D
Sbjct: 207 GVLHAQGYEHEEDAEAEEMEAIETETLQALGYADPYQGD 245


>gi|168179379|ref|ZP_02614043.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum
           NCTC 2916]
 gi|182669701|gb|EDT81677.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum
           NCTC 2916]
          Length = 166

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 17/128 (13%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GC 96
             E+S+VF D++ I+ +N +YR IDK T+VLSFP                  F  SD   
Sbjct: 37  DYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEKGEVFKDIYLNYEFDESDLDE 96

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++ +  +M   E 
Sbjct: 97  GNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEEDEKVIMRQREE 156

Query: 157 SILEDLGI 164
            IL+   +
Sbjct: 157 EILKSFNL 164


>gi|153938871|ref|YP_001392225.1| putative metalloprotease [Clostridium botulinum F str. Langeland]
 gi|170757065|ref|YP_001782581.1| putative metalloprotease [Clostridium botulinum B1 str. Okra]
 gi|166228940|sp|A7GHG5|RRMF_CLOBL RecName: Full=Probable rRNA maturation factor
 gi|229553944|sp|B1ILL2|RRMF_CLOBK RecName: Full=Probable rRNA maturation factor
 gi|152934767|gb|ABS40265.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum F
           str. Langeland]
 gi|169122277|gb|ACA46113.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum B1
           str. Okra]
 gi|295320223|gb|ADG00601.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum F
           str. 230613]
          Length = 166

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 17/128 (13%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GC 96
             E+S+VF D++ I+ +N +YR IDK T+VLSFP                  F  SD   
Sbjct: 37  DYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEEGKVFKDIYLNYEFDESDLDE 96

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++ +  +M   E 
Sbjct: 97  GNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEEDEKVIMRQREE 156

Query: 157 SILEDLGI 164
            IL+   +
Sbjct: 157 EILKSFNL 164


>gi|256825018|ref|YP_003148978.1| hypothetical protein Ksed_11740 [Kytococcus sedentarius DSM 20547]
 gi|256688411|gb|ACV06213.1| conserved hypothetical protein TIGR00043 [Kytococcus sedentarius
           DSM 20547]
          Length = 166

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++ VE+    D   +    +                      EL + F D+  IE L
Sbjct: 1   MTIEVLVEDDPLTDPDDVVAAAQFAMDT----------LHVNPAAELCIRFVDAAAIEVL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++  +  PT+V+SFP                +LGDIVL   +   +A+ LG      L
Sbjct: 51  HEQWMDLAGPTDVMSFPMDELRPGTPERPSEPGVLGDIVLCPTVAAEQASRLGHPVGEEL 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L +HG LHLLGYDH D  D   M  L+  +L   
Sbjct: 111 LMLTVHGVLHLLGYDHADPDDEREMFTLQAELLTAY 146


>gi|118462943|ref|YP_881245.1| metalloprotease [Mycobacterium avium 104]
 gi|254774751|ref|ZP_05216267.1| putative metalloprotease [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|145572765|sp|A0QEA7|RRMF_MYCA1 RecName: Full=Probable rRNA maturation factor
 gi|118164230|gb|ABK65127.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 177

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V AK   N             ELS+V  D+  +  L
Sbjct: 1   MSIEVSNESGIDVSEAELISVARFVIAKMDVN----------PAAELSMVLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAADQAAAAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 111 ELALLTIHGVLHLLGYDHGEPDEEKEMFALQDRLLEEW 148


>gi|15609504|ref|NP_216883.1| putative metalloprotease [Mycobacterium tuberculosis H37Rv]
 gi|31793544|ref|NP_856037.1| putative metalloprotease [Mycobacterium bovis AF2122/97]
 gi|121638246|ref|YP_978470.1| putative metalloprotease [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148662199|ref|YP_001283722.1| putative metalloprotease [Mycobacterium tuberculosis H37Ra]
 gi|148823570|ref|YP_001288324.1| putative metalloprotease [Mycobacterium tuberculosis F11]
 gi|224990740|ref|YP_002645427.1| hypothetical protein JTY_2375 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798555|ref|YP_003031556.1| hypothetical protein TBMG_01608 [Mycobacterium tuberculosis KZN
           1435]
 gi|289443888|ref|ZP_06433632.1| metalloprotease [Mycobacterium tuberculosis T46]
 gi|289448009|ref|ZP_06437753.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553843|ref|ZP_06443053.1| hypothetical protein TBXG_01593 [Mycobacterium tuberculosis KZN
           605]
 gi|289570510|ref|ZP_06450737.1| hypothetical protein TBJG_00877 [Mycobacterium tuberculosis T17]
 gi|289575061|ref|ZP_06455288.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746145|ref|ZP_06505523.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289750966|ref|ZP_06510344.1| hypothetical protein TBDG_01176 [Mycobacterium tuberculosis T92]
 gi|289754472|ref|ZP_06513850.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758490|ref|ZP_06517868.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289762533|ref|ZP_06521911.1| hypothetical protein TBIG_01770 [Mycobacterium tuberculosis GM
           1503]
 gi|308232114|ref|ZP_07414969.2| hypothetical protein TMAG_02926 [Mycobacterium tuberculosis
           SUMu001]
 gi|308369698|ref|ZP_07418742.2| hypothetical protein TMBG_00911 [Mycobacterium tuberculosis
           SUMu002]
 gi|308370990|ref|ZP_07423477.2| hypothetical protein TMCG_00467 [Mycobacterium tuberculosis
           SUMu003]
 gi|308372215|ref|ZP_07427838.2| hypothetical protein TMDG_00845 [Mycobacterium tuberculosis
           SUMu004]
 gi|308373392|ref|ZP_07432143.2| hypothetical protein TMEG_02734 [Mycobacterium tuberculosis
           SUMu005]
 gi|308374561|ref|ZP_07436540.2| hypothetical protein TMFG_01331 [Mycobacterium tuberculosis
           SUMu006]
 gi|308375864|ref|ZP_07445354.2| hypothetical protein TMGG_00928 [Mycobacterium tuberculosis
           SUMu007]
 gi|308376991|ref|ZP_07440782.2| hypothetical protein TMHG_01561 [Mycobacterium tuberculosis
           SUMu008]
 gi|308377993|ref|ZP_07481176.2| hypothetical protein TMIG_01044 [Mycobacterium tuberculosis
           SUMu009]
 gi|308379183|ref|ZP_07485405.2| hypothetical protein TMJG_00637 [Mycobacterium tuberculosis
           SUMu010]
 gi|308380346|ref|ZP_07489619.2| hypothetical protein TMKG_00630 [Mycobacterium tuberculosis
           SUMu011]
 gi|308404861|ref|ZP_07494158.2| hypothetical protein TMLG_02116 [Mycobacterium tuberculosis
           SUMu012]
 gi|2078032|emb|CAB08472.1| UNKNOWN [Mycobacterium tuberculosis H37Rv]
 gi|31619137|emb|CAD97249.1| FUNCTION UNKNOWN [Mycobacterium bovis AF2122/97]
 gi|121493894|emb|CAL72369.1| Function unknown [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148506351|gb|ABQ74160.1| hypothetical protein MRA_2391 [Mycobacterium tuberculosis H37Ra]
 gi|148722097|gb|ABR06722.1| hypothetical protein TBFG_12393 [Mycobacterium tuberculosis F11]
 gi|224773853|dbj|BAH26659.1| hypothetical protein JTY_2375 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253320058|gb|ACT24661.1| hypothetical protein TBMG_01608 [Mycobacterium tuberculosis KZN
           1435]
 gi|289416807|gb|EFD14047.1| metalloprotease [Mycobacterium tuberculosis T46]
 gi|289420967|gb|EFD18168.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438475|gb|EFD20968.1| hypothetical protein TBXG_01593 [Mycobacterium tuberculosis KZN
           605]
 gi|289539492|gb|EFD44070.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544264|gb|EFD47912.1| hypothetical protein TBJG_00877 [Mycobacterium tuberculosis T17]
 gi|289686673|gb|EFD54161.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691553|gb|EFD58982.1| hypothetical protein TBDG_01176 [Mycobacterium tuberculosis T92]
 gi|289695059|gb|EFD62488.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710039|gb|EFD74055.1| hypothetical protein TBIG_01770 [Mycobacterium tuberculosis GM
           1503]
 gi|289714054|gb|EFD78066.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308214951|gb|EFO74350.1| hypothetical protein TMAG_02926 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326727|gb|EFP15578.1| hypothetical protein TMBG_00911 [Mycobacterium tuberculosis
           SUMu002]
 gi|308330140|gb|EFP18991.1| hypothetical protein TMCG_00467 [Mycobacterium tuberculosis
           SUMu003]
 gi|308334001|gb|EFP22852.1| hypothetical protein TMDG_00845 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337782|gb|EFP26633.1| hypothetical protein TMEG_02734 [Mycobacterium tuberculosis
           SUMu005]
 gi|308341463|gb|EFP30314.1| hypothetical protein TMFG_01331 [Mycobacterium tuberculosis
           SUMu006]
 gi|308344949|gb|EFP33800.1| hypothetical protein TMGG_00928 [Mycobacterium tuberculosis
           SUMu007]
 gi|308349260|gb|EFP38111.1| hypothetical protein TMHG_01561 [Mycobacterium tuberculosis
           SUMu008]
 gi|308353880|gb|EFP42731.1| hypothetical protein TMIG_01044 [Mycobacterium tuberculosis
           SUMu009]
 gi|308357825|gb|EFP46676.1| hypothetical protein TMJG_00637 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361771|gb|EFP50622.1| hypothetical protein TMKG_00630 [Mycobacterium tuberculosis
           SUMu011]
 gi|308365393|gb|EFP54244.1| hypothetical protein TMLG_02116 [Mycobacterium tuberculosis
           SUMu012]
 gi|323719034|gb|EGB28182.1| hypothetical protein TMMG_01659 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903983|gb|EGE50916.1| hypothetical protein TBPG_01872 [Mycobacterium tuberculosis W-148]
 gi|328458323|gb|AEB03746.1| hypothetical protein TBSG_01617 [Mycobacterium tuberculosis KZN
           4207]
          Length = 182

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +   E  L ++   V AK   N             ELS++  D+  +  L
Sbjct: 6   MSIEVANESGIDVSEAELVSVARFVIAKMDVN----------PCAELSMLLLDTAAMADL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 56  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAEQAAAAGHSLGH 115

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 116 ELALLTIHGVLHLLGYDHAEPDEEKEMFALQDRLLEEW 153


>gi|300853994|ref|YP_003778978.1| hypothetical protein CLJU_c08080 [Clostridium ljungdahlii DSM
           13528]
 gi|300434109|gb|ADK13876.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 164

 Score =  140 bits (354), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 17/128 (13%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSDGCS 97
             E+S++F D+  I+ +N E R IDK T+VLSFP                  F  SD   
Sbjct: 37  PCEISVIFIDNEEIKNINRENRNIDKVTDVLSFPMLEYPEGSVFKQVYVNHEFEESDMDD 96

Query: 98  S-LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             L+LGDI L+ E  E +A   G  F     +L +H  LHLLGYDH+++ D  +M   E 
Sbjct: 97  GNLVLGDIALSLERAEEQAQEFGHSFLREACYLTVHSVLHLLGYDHMEESDKKIMRQREE 156

Query: 157 SILEDLGI 164
            IL    +
Sbjct: 157 EILSGFKL 164


>gi|310828432|ref|YP_003960789.1| hypothetical protein ELI_2845 [Eubacterium limosum KIST612]
 gi|308740166|gb|ADO37826.1| hypothetical protein ELI_2845 [Eubacterium limosum KIST612]
          Length = 156

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 14/159 (8%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDL+I   + +  D      + E +        +           E+S        I+ 
Sbjct: 4   ELDLEIDNRSGVELDASVYEKVEEYIIITLQQENVLV-------PCEISFSLVIPEEIQE 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCS-------SLMLGDIVLAYEIIEIEANVLGKEF 122
           LN EYR IDK T+VLSFP      D           +MLGDIV++      +A   G   
Sbjct: 57  LNAEYRNIDKETDVLSFPMLEFPEDEDMLTYETGIPVMLGDIVISTTRAAEQAEAYGHSL 116

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           E  + +L +H  LHLLGYDH+++ +  VM   E++I+ D
Sbjct: 117 EREICYLSVHSVLHLLGYDHMEEDEKRVMRAREKAIMGD 155


>gi|262370521|ref|ZP_06063846.1| metal-dependent hydrolase [Acinetobacter johnsonii SH046]
 gi|262314321|gb|EEY95363.1| metal-dependent hydrolase [Acinetobacter johnsonii SH046]
          Length = 159

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + L ++++      E+ L+        K V  ++   +   ++  E+ +   D      L
Sbjct: 1   MKLSLSLQQDFQAPELVLK---RGYLKKVVETVLR--HIGTQSNCEIGIACVDHDESHKL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG--CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N EYRG DK TNVLSFP+           S  +GD+V+   ++ +EA    K    H  H
Sbjct: 56  NLEYRGKDKSTNVLSFPSDLPDEMAQILDSFPIGDLVICIPVVLLEAKEQNKAPLTHFTH 115

Query: 129 LIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPY 168
           +++HG LHL+GYDH   + DA  MEG+E  IL  LG  +PY
Sbjct: 116 MLVHGTLHLMGYDHETSEADAEEMEGIEIEILAKLGFENPY 156


>gi|256847124|ref|ZP_05552570.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715788|gb|EEU30763.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 157

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 9/141 (6%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +   A+ +    +    +KEN  E+SL F  +  I+ LN +YRG+D+ T+V+SF      
Sbjct: 17  QKQLAEKLLAFAAHQLGLKEND-EMSLTFVRNPEIKALNAKYRGVDRATDVISFAMGDGD 75

Query: 93  SDGCS--------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
            +              LGD+ ++ + ++ +A  LG   +  L  L++HGFLHL GYDH  
Sbjct: 76  EEIVMDDAMAAELPHDLGDLFISVDKVKEQALFLGHSADRELGFLVVHGFLHLNGYDHEQ 135

Query: 145 DKDACVMEGLERSILEDLGIN 165
             D   M  L+  IL+D G+ 
Sbjct: 136 PDDEKKMFSLQEKILDDYGLA 156


>gi|254519867|ref|ZP_05131923.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226913616|gb|EEH98817.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 166

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 17/130 (13%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------------- 94
           E   ++SL+F D+  I  +N E R ID+ T+VLSFP                        
Sbjct: 35  ECQYQISLLFVDNEEIREINNETRNIDRATDVLSFPMLDFEDKKVFNEMYLNYDFDETFK 94

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L+LGD+VL+ E    ++   G  +E  + +L++H  LHLLGYDH+++ D   M   
Sbjct: 95  DGDELILGDMVLSLERALEQSEEYGHSYEREVSYLVVHSILHLLGYDHMEEDDKKRMRKR 154

Query: 155 ERSILEDLGI 164
           E  IL  L I
Sbjct: 155 EEEILNKLQI 164


>gi|170759303|ref|YP_001788261.1| putative metalloprotease [Clostridium botulinum A3 str. Loch Maree]
 gi|238688538|sp|B1KZM6|RRMF_CLOBM RecName: Full=Probable rRNA maturation factor
 gi|169406292|gb|ACA54703.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum A3
           str. Loch Maree]
          Length = 166

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 19/152 (12%)

Query: 32  CEVVFAKAVSNLISKGYFVKE--NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            +  F   +  +I      ++     E+S++F D++ I+ +N +YR IDK T+VLSFP  
Sbjct: 13  VDEEFENKIKEIIDYALKEEKVNIDYEISVIFIDNNSIKEINKDYRNIDKATDVLSFPML 72

Query: 89  ---------------AFASSD-GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                           F  SD    +L+LGDI L+ E  E ++   G  F     +L IH
Sbjct: 73  DYEEGEVFKDVYLNYEFDESDLDEGNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIH 132

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             LHLLGYDH+++ +  +M   E  IL+   +
Sbjct: 133 SVLHLLGYDHMEEDEKAIMRQREEEILKSFNL 164


>gi|118618894|ref|YP_907226.1| putative metalloprotease [Mycobacterium ulcerans Agy99]
 gi|183983657|ref|YP_001851948.1| metal-dependent hydrolase [Mycobacterium marinum M]
 gi|145558814|sp|A0PTT6|RRMF_MYCUA RecName: Full=Probable rRNA maturation factor
 gi|238690927|sp|B2HLB7|RRMF_MYCMM RecName: Full=Probable rRNA maturation factor
 gi|118571004|gb|ABL05755.1| conserved hypothetical metal-dependent hydrolase [Mycobacterium
           ulcerans Agy99]
 gi|183176983|gb|ACC42093.1| conserved hypothetical metal-dependent hydrolase [Mycobacterium
           marinum M]
          Length = 178

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V  K   N             ELS+V  D+  +  L
Sbjct: 1   MSIEVSNESGIDVSETELVSVARFVIGKMDVN----------PGAELSMVLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAAEQAAAAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 111 ELALLTIHGVLHLLGYDHGEPDEEKEMFALQDRLLEEW 148


>gi|237747923|ref|ZP_04578403.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229379285|gb|EEO29376.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 166

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 57/168 (33%), Positives = 76/168 (45%), Gaps = 25/168 (14%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + DE    TL      + V   +            ++L F D+    TLN EYR  D  
Sbjct: 6   QYPDERLKTTLTRPKLRRWVQAALQM-------PAVITLRFVDAEEGRTLNREYREKDYA 58

Query: 81  TNVLSFPTAFASS------------------DGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           TNVL+FP                        D    +   DIVL  +++E EA   GK  
Sbjct: 59  TNVLTFPYDDMDEFDLTDAVPSRPEPEADRDDIPEQMAQADIVLCTDVLEKEAKEQGKSL 118

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           E H  HL++HG LH  GYDH++D++A  ME LE+ IL  LGI +PYE 
Sbjct: 119 EAHAAHLVVHGTLHAQGYDHLNDEEAEEMETLEKQILAKLGIANPYED 166


>gi|220909854|ref|YP_002485165.1| hypothetical protein Cyan7425_4494 [Cyanothece sp. PCC 7425]
 gi|254803919|sp|B8HK54|RRMF_CYAP4 RecName: Full=Probable rRNA maturation factor
 gi|219866465|gb|ACL46804.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 7425]
          Length = 169

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 8/163 (4%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +DLQ A  ++     I   T     F +    L            EL L  TD   I +
Sbjct: 4   DVDLQDAYSSSTAQVPIAAETWL-TWFNRWFELLHPS--LPPACSYELCLRLTDDGEIAS 60

Query: 70  LNFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           LN  YR   +PT+VL+F         +  D    L LGDIV++ +  + ++         
Sbjct: 61  LNSFYRQQPQPTDVLAFAALEVEVPRSPPDQTELLHLGDIVISVDTAQRQSLAGQHSLTV 120

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
            L  L  HGFLHLLG+DH D      M   +  +L  +G+ +P
Sbjct: 121 ELAWLAAHGFLHLLGWDHPDPASLEQMLKQQSILLAAVGLENP 163


>gi|15617041|ref|NP_240254.1| hypothetical protein BU442 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681793|ref|YP_002468179.1| hypothetical protein BUAP5A_435 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682348|ref|YP_002468732.1| hypothetical protein BUAPTUC7_436 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|25403623|pir||D84981 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039106|dbj|BAB13140.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219622081|gb|ACL30237.1| hypothetical protein BUAPTUC7_436 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624636|gb|ACL30791.1| hypothetical protein BUAP5A_435 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 111

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 2/107 (1%)

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
            D   I+ LNF YR  +KPTN+LSFP  F      +  +LGD+VL   IIE E+    K 
Sbjct: 2   VDEWEIKKLNFNYRKKNKPTNILSFP--FNKFIKINYKLLGDLVLCKNIIEKESLKYNKS 59

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            E+H  H+ IHG LHLLGYDH ++K+A +ME LE  I+  L    P+
Sbjct: 60  LESHWAHITIHGTLHLLGYDHQNNKEADIMERLENKIMLSLNYKKPH 106


>gi|329113344|ref|ZP_08242125.1| Putative metalloprotease [Acetobacter pomorum DM001]
 gi|326697169|gb|EGE48829.1| Putative metalloprotease [Acetobacter pomorum DM001]
          Length = 179

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 16/156 (10%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +I + +  W   +H     E +  +A++     G          ++V      +  LN  
Sbjct: 37  EILIRDRRWRSYVHNP---EQLVWRALAACSEYGGLPD------TVVLATDREVRELNGR 87

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           +RG  +PTNVL+F       +    +  GDI+LA E +  EA   GK   +HL HL+IHG
Sbjct: 88  HRGKQRPTNVLTF-------EPPPGINGGDIILALETVVREARKAGKPVADHLAHLVIHG 140

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            LHL GYDH    +A  ME LE  +L  L + +P++
Sbjct: 141 SLHLAGYDHHHPGEAREMEMLESRLLSRLRVPNPWK 176


>gi|126656865|ref|ZP_01728043.1| hypothetical protein CY0110_01764 [Cyanothece sp. CCY0110]
 gi|126621703|gb|EAZ92412.1| hypothetical protein CY0110_01764 [Cyanothece sp. CCY0110]
          Length = 172

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 9/137 (6%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-- 92
            F    ++L+S  Y    +  EL+L  T    I++LN +YR  ++PT+VL+F T   +  
Sbjct: 38  WFQIWGNSLLS--YLPIASHYELTLRLTGDQEIQSLNAQYRHKNQPTDVLAFATLEENFP 95

Query: 93  -----SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                 +    L +GDIV++ E  E +A   G      L  L  HGFLHLLG+DH D++ 
Sbjct: 96  KITNQPEFLEPLYIGDIVISIETAEKQAQKEGHTLNRELPWLASHGFLHLLGWDHPDEQS 155

Query: 148 ACVMEGLERSILEDLGI 164
              M   + ++L+ +G+
Sbjct: 156 LQKMLQQQETLLKIIGL 172


>gi|167755644|ref|ZP_02427771.1| hypothetical protein CLORAM_01159 [Clostridium ramosum DSM 1402]
 gi|237734392|ref|ZP_04564873.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167704583|gb|EDS19162.1| hypothetical protein CLORAM_01159 [Clostridium ramosum DSM 1402]
 gi|229382622|gb|EEO32713.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 153

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 2/123 (1%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM--LG 102
           +      E  +ELS +  D  +I  +N EYR ID+ T+V+SF            +   +G
Sbjct: 29  AAKQLGIEEDLELSCILVDDSKIHEINKEYRKIDRATDVISFALEDNEQFYVPGMPRSIG 88

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI ++ +  +++A   G + +  +  L  HG LHLLG+DH+ ++D   M  +++SIL+ L
Sbjct: 89  DIFISVDHAKVQAEEYGHDLKREMCFLFTHGLLHLLGFDHMIEEDEIQMIAMQKSILDAL 148

Query: 163 GIN 165
            I 
Sbjct: 149 NIT 151


>gi|292669777|ref|ZP_06603203.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292648574|gb|EFF66546.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 153

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 7/152 (4%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E     +++ +         +AV  +   G        E+S+  TD   +  LN EYR 
Sbjct: 3   IEIRREPEDLPVPDSDIAAVRRAVETV---GRLYGAEDAEVSVTLTDDAHVHVLNREYRN 59

Query: 77  IDKPTNVLSFPTAFASSDGC----SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           +D+PT+VLSF  A +           ++LGD+V++ E    +A   G      L  L +H
Sbjct: 60  VDRPTDVLSFALAESEEPEIIGADGGMVLGDLVISLERTAAQAEEYGHSMLRELSFLTVH 119

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           G LHLLGYDH+++++   ME  +R ++E+LGI
Sbjct: 120 GMLHLLGYDHMEEEERLEMEEEQRHVMEELGI 151


>gi|301300991|ref|ZP_07207154.1| translation metalloprotein YbeY [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851407|gb|EFK79128.1| translation metalloprotein YbeY [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 159

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 19/166 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL+I  +      E       ++   K V     K   + E+  E+S+   ++ +I  +
Sbjct: 1   MDLEIFDDTNSVPAE-------KIQLVKDVLEFSGKYLELPED-TEMSVTLMNNEQIHEI 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANVLG 119
           N +YRG+DK T+V+SF       D                 +GD++++ + ++ +A  LG
Sbjct: 53  NLKYRGVDKATDVISFAIEEDDPDELPIILPDYVDFEEPKNIGDMMISMDKVKEQAEYLG 112

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +  L  L +HGFLHL GYDH+  +D  VM  L+R IL+  G+ 
Sbjct: 113 HSEDRELGFLTVHGFLHLNGYDHMKAEDEKVMFKLQRDILDAYGLK 158


>gi|217967710|ref|YP_002353216.1| protein of unknown function UPF0054 [Dictyoglomus turgidum DSM
           6724]
 gi|217336809|gb|ACK42602.1| protein of unknown function UPF0054 [Dictyoglomus turgidum DSM
           6724]
          Length = 142

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 5/130 (3%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E    K     + K      N  ++S+V  D  +I  LN +YRG D PT+VLSF      
Sbjct: 16  EEDRVKNFVKEVFKKEGFLPNKYDISVVLVDDEKIRELNSKYRGKDTPTDVLSFSL---- 71

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  ++G+I ++ +  +I+A    K   + +  L +HG LH+LGYDH +D++   ME
Sbjct: 72  GKDPKGRIVGEIYISIDTAKIQAKENNKTLIDEVAFLTLHGLLHILGYDHENDEEYEKME 131

Query: 153 GLERSILEDL 162
             E   L  L
Sbjct: 132 -KETKKLISL 140


>gi|296188183|ref|ZP_06856575.1| metalloprotein, YbeY/ UPF0054family [Clostridium carboxidivorans
           P7]
 gi|296047309|gb|EFG86751.1| metalloprotein, YbeY/ UPF0054family [Clostridium carboxidivorans
           P7]
          Length = 166

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 19/159 (11%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           ++I +    E      +   + +         E+S++F D+ +I+ +N E R IDK T+V
Sbjct: 9   NKIEISDEIEKNIVSIIEYALQEEKVNIP--CEVSVIFVDNEKIKEINKENRNIDKVTDV 66

Query: 84  LSFPTAFAS-----------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LSFP                           SL+LGDIVL+ E  + ++      F   +
Sbjct: 67  LSFPMLDYEKGKVFKDTYKDFNFSHVDLDEGSLVLGDIVLSLEKAKEQSLEFNHSFIREV 126

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           V+L IH  LHLLGYDH+++ +  +M   E  ILE   + 
Sbjct: 127 VYLTIHSVLHLLGYDHMEEDEKSIMRKREEQILEKFHLT 165


>gi|28211644|ref|NP_782588.1| putative metalloprotease [Clostridium tetani E88]
 gi|46577461|sp|Q892R9|RRMF_CLOTE RecName: Full=Probable rRNA maturation factor
 gi|28204086|gb|AAO36525.1| metal-binding protein [Clostridium tetani E88]
          Length = 167

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 19/153 (12%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIV--ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            +    K ++ +I      +E  +  E+S+++ D+  I+ +N + RGI+K T+VLSFP  
Sbjct: 13  AQEDLDKLINEIIDYALKKEEVDIGYEISVIYVDNEIIKEINNDTRGINKETDVLSFPML 72

Query: 90  FASSD-----------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                                    +L+LGDIVL+ E    ++      F   + +L++H
Sbjct: 73  EYPKGRVFSESYREYSFGVEYLNEGNLVLGDIVLSLEKALEQSKEYNHSFLREVCYLVVH 132

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             LHLLGYDH+D+++  +M   E  ILE   I+
Sbjct: 133 SVLHLLGYDHIDEEEKVIMRKKEEEILESFNIS 165


>gi|162147625|ref|YP_001602086.1| hypothetical protein GDI_1841 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786202|emb|CAP55784.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 152

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 7/132 (5%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
            A+    ++  +  +    ++++  +   I  LN  +R  +KPTNVL+F       D   
Sbjct: 14  AALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLNARHRDRNKPTNVLTF-------DYPG 66

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
            L  GDI++A E +  EA   G+   +HL+HL++HG LHL G+DH    +A  ME  E  
Sbjct: 67  GLPGGDIMIALETVRREAQAAGRPIRHHLMHLVVHGILHLRGHDHHQAGEARRMEMEEAR 126

Query: 158 ILEDLGINDPYE 169
           IL  L + +P++
Sbjct: 127 ILGRLSVPNPWK 138


>gi|146296844|ref|YP_001180615.1| hypothetical protein Csac_1839 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166980486|sp|A4XKI9|RRMF_CALS8 RecName: Full=Probable rRNA maturation factor
 gi|145410420|gb|ABP67424.1| protein of unknown function UPF0054 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 158

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 8/125 (6%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--------SSLM 100
           F+ +   E+S++  D+  I+ LN  YR IDK T+VLSFP     +             + 
Sbjct: 33  FMDDENYEISVMIVDNQFIKELNKHYRSIDKETDVLSFPIFEFKNGELQEDIAIVEEEIP 92

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDIV++ E    +A   G   E  + +L +H  LHLLG+DH++++D  +M   E  +LE
Sbjct: 93  LGDIVISIEKAYEQAKEFGHSVEREIAYLTVHSVLHLLGFDHIEEEDRMLMRKYEEMVLE 152

Query: 161 DLGIN 165
            +G+ 
Sbjct: 153 GMGLT 157


>gi|172041012|ref|YP_001800726.1| putative metalloprotease [Corynebacterium urealyticum DSM 7109]
 gi|171852316|emb|CAQ05292.1| conserved hypothetical protein [Corynebacterium urealyticum DSM
           7109]
          Length = 200

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P + +++  E+  WG+      +    +     ++         +  ELS+   D  
Sbjct: 1   MENPLVSIEVFNESG-WGEINEEELIDVARYTLWTMDV--------HSSAELSIHIVDEE 51

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVL 118
            I  L+  +  +  PT+V+SFP                S  MLGDI+L     + +A   
Sbjct: 52  TIADLHLRWLNLPGPTDVMSFPMDELTPGWGRKDGPPVSPAMLGDIMLCPSFAKGQAERA 111

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           G    + L  L +HG LHLLG+DHV  ++   M  ++  +L + 
Sbjct: 112 GHSLAHELDLLTVHGVLHLLGFDHVTPEEEQQMFSIQNEVLANW 155


>gi|33519779|ref|NP_878611.1| hypothetical protein Bfl316 [Candidatus Blochmannia floridanus]
 gi|46577400|sp|Q7VRA3|RRMF_BLOFL RecName: Full=Probable rRNA maturation factor
 gi|33504124|emb|CAD83386.1| predicted metal-dependent hydrolase [Candidatus Blochmannia
           floridanus]
          Length = 153

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 2/110 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL++   D   +  LN+ Y G   PTNVLSFP  F       + +LGDIV+  +IIE E 
Sbjct: 41  ELTIRIVDIQEMLYLNWYYLGKKYPTNVLSFP--FEPPSEIQTSLLGDIVICKQIIEYEN 98

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                  + H  H+IIHG LHLLGYDH+ D+DA +M  +E +I+  LG  
Sbjct: 99  RKNNIFSDVHWAHMIIHGSLHLLGYDHICDEDAELMNAMELNIIRTLGYK 148


>gi|148380900|ref|YP_001255441.1| putative metalloprotease [Clostridium botulinum A str. ATCC 3502]
 gi|153933017|ref|YP_001385208.1| putative metalloprotease [Clostridium botulinum A str. ATCC 19397]
 gi|153936466|ref|YP_001388677.1| putative metalloprotease [Clostridium botulinum A str. Hall]
 gi|166228924|sp|A7FXK4|RRMF_CLOB1 RecName: Full=Probable rRNA maturation factor
 gi|166228931|sp|A5I629|RRMF_CLOBH RecName: Full=Probable rRNA maturation factor
 gi|148290384|emb|CAL84511.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929061|gb|ABS34561.1| metal-binding protein [Clostridium botulinum A str. ATCC 19397]
 gi|152932380|gb|ABS37879.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum A
           str. Hall]
          Length = 166

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 17/128 (13%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GC 96
             E+S+VF D++ I+ +N +YR IDK T+VLSFP                  F  SD   
Sbjct: 37  DYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEDGEVFKDIYLNYEFDESDLDE 96

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++ +  +M   E 
Sbjct: 97  GNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEEDEKVIMRQREE 156

Query: 157 SILEDLGI 164
            IL+   +
Sbjct: 157 EILKSFNL 164


>gi|296133914|ref|YP_003641161.1| protein of unknown function UPF0054 [Thermincola sp. JR]
 gi|296032492|gb|ADG83260.1| protein of unknown function UPF0054 [Thermincola potens JR]
          Length = 153

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           +++ +         +  + ++ +  F      E+ +V  D   I  LN +YRG+D PT+V
Sbjct: 10  EKVEVPPELGETIERVANAVLEQSEFPG---AEVGIVLVDDDYIHQLNKQYRGVDSPTDV 66

Query: 84  LSFPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           LSF           +    L+LGD+ ++ E  + +A   G  F   + +L  HG  HLLG
Sbjct: 67  LSFALIEDGEEEFFEEEEDLLLGDVFISVERAQNQAEEYGHSFTREMAYLTAHGMFHLLG 126

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YDH  +++  +M   E  +L  L I 
Sbjct: 127 YDHNTEEERDIMREKEEQVLTGLNIT 152


>gi|317497353|ref|ZP_07955676.1| hypothetical protein HMPREF0996_00656 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895422|gb|EFV17581.1| hypothetical protein HMPREF0996_00656 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 170

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 22/169 (13%)

Query: 13  LQIAVENALWGD-EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           + I +EN   G+  I    +   V   A+       Y       E++L+ TD+  I  +N
Sbjct: 1   MSIIIENEYEGEINIPYEKIAHEVIEAAID------YVDCPYECEVNLMLTDNETIHAIN 54

Query: 72  FEYRGIDKPTNVLSFPTAFASSD---------------GCSSLMLGDIVLAYEIIEIEAN 116
            E R ID+PT+VLSFP A                         +LGDIV++ + +  +A 
Sbjct: 55  KEQREIDRPTDVLSFPMAEYEEPADFSKIEEDPMAFDPESGEFLLGDIVISMDKVWEQAE 114

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E     LI H  LHL GYDH+++++   ME  +  IL      
Sbjct: 115 NYGHSREREYAFLIAHSMLHLFGYDHMEEEERKDMEKRQEEILTKTKYT 163


>gi|227495126|ref|ZP_03925442.1| metalloprotease [Actinomyces coleocanis DSM 15436]
 gi|226831578|gb|EEH63961.1| metalloprotease [Actinomyces coleocanis DSM 15436]
          Length = 169

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E     D    R + E V A+   +             EL+L+F +   +E L
Sbjct: 1   MTIEVANETEYQVDIDEFRAVVEFVLAQMHVST----------EAELALMFIEPEPMEEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGC----SSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++  +  PT+V+SFP                 LGDIV+   +   +A   G      +
Sbjct: 51  HIKWMDLPGPTDVMSFPMDELRPGTPGRVTPPGTLGDIVICPTVAAAQALKAGHSAAEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L +HG LHLLGYDHV+ ++  VM  L+R +L
Sbjct: 111 LLLTVHGVLHLLGYDHVEPEEEKVMFELQRKLL 143


>gi|227543020|ref|ZP_03973069.1| metalloprotease [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227181242|gb|EEI62214.1| metalloprotease [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 174

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + +++  E+     DE  L T+ E        +            VE+++   D   IE 
Sbjct: 1   MSIEVLNESGNTDVDEKQLSTVAEFALTTMDVH----------PSVEVTITCVDLDTIED 50

Query: 70  LNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           L+  +  ++ PT+V+SFP            +       LGDI+L  +  + +A+  G   
Sbjct: 51  LHVRWLDLEGPTDVMSFPMDDISSTGGRPDAADPGPAYLGDIILCPDFAQKQADKAGHSL 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            + L  L +HG LHLLGYDH    +   M  L+  IL+  
Sbjct: 111 NHELDLLTVHGCLHLLGYDHAKPNEEQHMFALQNDILKRW 150


>gi|78213952|ref|YP_382731.1| hypothetical protein Syncc9605_2444 [Synechococcus sp. CC9605]
 gi|123577427|sp|Q3AGV6|RRMF_SYNSC RecName: Full=Probable rRNA maturation factor
 gi|78198411|gb|ABB36176.1| Protein of unknown function UPF0054 [Synechococcus sp. CC9605]
          Length = 166

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 66/164 (40%), Gaps = 12/164 (7%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS----------KGYFVKENIVELSL 59
            LDL +  E            L E V+ + + + +                    + L L
Sbjct: 2   ELDLALDREEGALQASEIGDLLDETVWLQQLEHWLQIVCGDESLDCPTLVRSAEELSLGL 61

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--MLGDIVLAYEIIEIEANV 117
            F D   I  LN  +R    PT+VLSF     + D        LGDIV++ E    +A  
Sbjct: 62  RFIDDATIADLNSTWRQKTGPTDVLSFAALDDAGDWMEGPSIELGDIVVSLETARRQAQE 121

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            G   +  L  L+ HG LHLLG+DH D+K    M  L+  +L D
Sbjct: 122 QGHSLQQELRWLVSHGLLHLLGWDHPDEKSLATMLALQERLLGD 165


>gi|149194504|ref|ZP_01871600.1| hypothetical protein CMTB2_00634 [Caminibacter mediatlanticus TB-2]
 gi|149135248|gb|EDM23728.1| hypothetical protein CMTB2_00634 [Caminibacter mediatlanticus TB-2]
          Length = 137

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 9/126 (7%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +  L     F+ +  VEL  + T    I+ LN EYR  DKPT+VLSFP      +    +
Sbjct: 14  IEKLYEIYNFLTDKDVEL--ILTTDEEIQKLNKEYRNKDKPTDVLSFPL-----EDFPGM 66

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LG IV++ +  + EA   G   ++ +  L IHG LHLLGYDH  + D   M   E+ I+
Sbjct: 67  PLGSIVISIDTAKKEAEKFGHSIDDEIKLLFIHGLLHLLGYDH--EVDNGEMREKEKEII 124

Query: 160 EDLGIN 165
           E   + 
Sbjct: 125 EKFNLP 130


>gi|225572106|ref|ZP_03780970.1| hypothetical protein RUMHYD_00400 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040440|gb|EEG50686.1| hypothetical protein RUMHYD_00400 [Blautia hydrogenotrophica DSM
           10507]
          Length = 164

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 18/142 (12%)

Query: 41  SNLISKGYFVKE---NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-- 95
           +NL+++     E     V+++LV TD+  I+ +N ++R I+ PT+VLSFP     + G  
Sbjct: 21  ANLVAEKVLDMEGCPYEVQINLVLTDNEEIQRVNQQFRDINAPTDVLSFPMIPFPTPGDY 80

Query: 96  -------------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
                           L+LGDI+++   +E +A   G         L+ H  LHLLGYDH
Sbjct: 81  KILEEEDSYFDLDTGELILGDIMISIPRMETQAQEFGHSQVREFSFLVAHSILHLLGYDH 140

Query: 143 VDDKDACVMEGLERSILEDLGI 164
           +  K+A VME  +   LE+L I
Sbjct: 141 MTPKEAAVMEAKQSQALEELQI 162


>gi|41408257|ref|NP_961093.1| putative metalloprotease [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|59799130|sp|Q73XZ9|RRMF_MYCPA RecName: Full=Probable rRNA maturation factor
 gi|41396612|gb|AAS04476.1| hypothetical protein MAP_2159c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 177

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V AK   N             ELS+V  D+  +  L
Sbjct: 1   MSIEVSNESGIDVSEAELISVARFVIAKMDVN----------PAAELSMVLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAADQAAAAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 111 ELALLTIHGVLHLLGYDHGEPDEEKEMFALQDRLLEEW 148


>gi|226950374|ref|YP_002805465.1| hypothetical protein TIGR00043 [Clostridium botulinum A2 str.
           Kyoto]
 gi|254801658|sp|C1FVS9|RRMF_CLOBJ RecName: Full=Probable rRNA maturation factor
 gi|226841958|gb|ACO84624.1| conserved hypothetical protein TIGR00043 [Clostridium botulinum A2
           str. Kyoto]
 gi|322807265|emb|CBZ04839.1| metal-dependent hydrolase [Clostridium botulinum H04402 065]
          Length = 166

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 17/128 (13%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----------------AFASSD-GC 96
             E+S+VF D++ I+ +N +YR IDK T+VLSFP                  F  SD   
Sbjct: 37  DYEISVVFIDNNSIKEINKDYRNIDKATDVLSFPMLDYEEGEVFKDIYLNYEFDESDLDE 96

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            +L+LGDI L+ E  E ++   G  F     +L IH  LHLLGYDH+++ +  +M   E 
Sbjct: 97  GNLVLGDIALSLEKAEEQSKEFGHSFLRETCYLTIHSVLHLLGYDHMEEDEKVIMRQREE 156

Query: 157 SILEDLGI 164
            IL+   +
Sbjct: 157 EILKSFNL 164


>gi|148243345|ref|YP_001228502.1| metal-dependent hydrolase [Synechococcus sp. RCC307]
 gi|172047894|sp|A5GW90|RRMF_SYNR3 RecName: Full=Probable rRNA maturation factor
 gi|147851655|emb|CAK29149.1| Predicted metal-dependent hydrolase [Synechococcus sp. RCC307]
          Length = 160

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 5/152 (3%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++L +A        E     L     A+  + L S    +K +   L L F D   I  L
Sbjct: 7   IELDLAYLGPDPLGEDRWVELLSSWLAQLQAELPSP---LKADAYSLGLQFCDDAAIAEL 63

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM--LGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N ++R   KPT+VLSF     + +    L   LGDIV++    E +A   G   +  L+ 
Sbjct: 64  NGQWRQQPKPTDVLSFAAQEDAPEPLEGLPIELGDIVISIPTAERQAPEHGHSLQQELLF 123

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           L  HG LHLLG+DH D+     M   + ++++
Sbjct: 124 LASHGLLHLLGWDHPDEASLAAMLSRQDALVQ 155


>gi|148653768|ref|YP_001280861.1| hypothetical protein PsycPRwf_1971 [Psychrobacter sp. PRwf-1]
 gi|148572852|gb|ABQ94911.1| protein of unknown function UPF0054 [Psychrobacter sp. PRwf-1]
          Length = 185

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 18/183 (9%)

Query: 3   VKKVNLPRLDLQIAVE--NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVE---- 56
           +    +P +D+  A E  +    ++ +   L + V    +  + ++   V     E    
Sbjct: 1   MTSAAIPLIDIS-ASELVDTQIIEQFYTPQLLQKVLTTTLDFMQAQSDVVLPYFSEVEPS 59

Query: 57  --------LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVL 106
                   L +  TD+     LN E R  D  TN+LS+P+   +   +    L LG++++
Sbjct: 60  VWQHKPKQLGVYITDAVEGRALNLEARDKDYATNILSYPSELPAFIIEQMPELALGELIV 119

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGIN 165
            +++++ +A    K    H+ HL++HG LHLLG+DH         MEG E +ILE LGI 
Sbjct: 120 CHDVVKQQAAEQHKTVAEHVTHLLVHGILHLLGFDHELGQAQQDEMEGFEIAILEQLGIG 179

Query: 166 DPY 168
           +PY
Sbjct: 180 NPY 182


>gi|307330993|ref|ZP_07610124.1| protein of unknown function UPF0054 [Streptomyces violaceusniger Tu
           4113]
 gi|306883379|gb|EFN14434.1| protein of unknown function UPF0054 [Streptomyces violaceusniger Tu
           4113]
          Length = 165

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 21/168 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+ +  DE  +  +     A+   + +S          ELS++  D+  +E L
Sbjct: 1   MAIDVNNESGIDIDERAVLDVARYALARMRIHPLS----------ELSVIVVDADAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-----ASSDGCSSLMLGDIVLAYEIIEIEANVLG--KEFE 123
           + ++  +  PT+V+SFP           +     +LGDIVL  E+ + +          +
Sbjct: 51  HIQWMDLPGPTDVMSFPMDELRPPAKDDEEPPQGLLGDIVLCPEVAKKQGEEAPTEHSMD 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL----GINDP 167
             L  L +HG LHLLGYDH +  +   M GL+ +I++      G+  P
Sbjct: 111 EELHLLTVHGVLHLLGYDHEEADERAEMFGLQAAIVDGWRAEQGLTGP 158


>gi|57899484|dbj|BAD86945.1| haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica
           Group]
          Length = 593

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N     +I L  L +  +    +++   G + K   VE+S++  + + I+ LN E+RG D
Sbjct: 138 NVPMAMKIALDGLLDSNYKTRDTSISDVGRYDK---VEVSVLLCNDNFIQNLNKEWRGED 194

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
               +LS        D    LMLGDIV++ E    +A   G    + +  L + G L LL
Sbjct: 195 SCIEMLSMSQYIPDLD-VPILMLGDIVISVETAARQAEERGHTLLDEVRILAVRGILRLL 253

Query: 139 GYDHVDDKD-ACVMEGLERSILEDL 162
           G+DH    + A  ME  E+ IL+ L
Sbjct: 254 GFDHQTSHESAVEMEKEEQLILKSL 278


>gi|227488408|ref|ZP_03918724.1| metalloprotease [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091622|gb|EEI26934.1| metalloprotease [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 174

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + +++  E+     DE  L T+ E        +            VE+++   D   IE 
Sbjct: 1   MSIEVLNESGNTDVDEKQLSTVAEFALTTMDVH----------PSVEVTITCVDLDTIED 50

Query: 70  LNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           L+  +  ++ PT+V+SFP            +       LGDI+L  +  + +A+  G   
Sbjct: 51  LHVRWLDLEGPTDVMSFPMDDISSTSGRPDAADPGPAYLGDIILCPDFAQKQADKAGHSL 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            + L  L +HG LHLLGYDH    +   M  L+  IL+  
Sbjct: 111 NHELDLLTVHGCLHLLGYDHAKPNEEQHMFALQNDILKRW 150


>gi|116495001|ref|YP_806735.1| metal-dependent hydrolase [Lactobacillus casei ATCC 334]
 gi|227534992|ref|ZP_03965041.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239631405|ref|ZP_04674436.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066563|ref|YP_003788586.1| putative metal-dependent hydrolase [Lactobacillus casei str. Zhang]
 gi|122263582|sp|Q038S9|RRMF_LACC3 RecName: Full=Probable rRNA maturation factor
 gi|116105151|gb|ABJ70293.1| Predicted metal-dependent hydrolase [Lactobacillus casei ATCC 334]
 gi|227187383|gb|EEI67450.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239525870|gb|EEQ64871.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438970|gb|ADK18736.1| Predicted metal-dependent hydrolase [Lactobacillus casei str.
           Zhang]
          Length = 152

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD- 94
             K +     K   + EN  E+S+       IE +N EYR  D+ T+V+SF       D 
Sbjct: 19  LIKKLVAFCGKQLKLPEN-TEMSITLVGDDEIERINREYRETDRVTDVISFAIEEGEDDL 77

Query: 95  ---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                 +  +GD+ +    +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM
Sbjct: 78  PLLPGMAKNIGDLFIDPLTVRRHAEDYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVM 137

Query: 152 EGLERSILEDLGIN 165
             L++ IL   G+ 
Sbjct: 138 IPLQKKILAAYGLT 151


>gi|299144158|ref|ZP_07037238.1| putative metalloprotease [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518643|gb|EFI42382.1| putative metalloprotease [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 148

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           +  K++  +I      +  +  +S+ F D   I+ LN  +RG+D  T+VLSFP       
Sbjct: 21  LIKKSILEVIKSEKLDENIM--VSVSFVDDEEIQELNKNFRGVDSSTDVLSFPI--DDEF 76

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                +LGD+V+  + +  +A       E  + +L +H  LHLLGYDH++++D  +M   
Sbjct: 77  QIEERILGDVVINTKRVIEQAQEFRHSNEREMSYLTVHSVLHLLGYDHIEEEDRLIMRSK 136

Query: 155 ERSILEDLGI 164
           E+ I+++L I
Sbjct: 137 EKIIMDNLKI 146


>gi|297243341|ref|ZP_06927274.1| metal-dependent hydrolase [Gardnerella vaginalis AMD]
 gi|296888588|gb|EFH27327.1| metal-dependent hydrolase [Gardnerella vaginalis AMD]
          Length = 186

 Score =  139 bits (352), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   I  L+  +  ++ PT+V+SFP       S +  S  MLGD+V+   + +
Sbjct: 36  DLSITFVDPEPIACLHERWMNLEGPTDVMSFPMDELTPGSDEKVSEGMLGDLVICPWVAQ 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   ++   M GL+R ++
Sbjct: 96  QQALAAGHSTMEEMLLLTIHGILHLLGYDHTTPEEEKQMFGLQRQLM 142


>gi|296081586|emb|CBI20591.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           +    + RLD+ IA+       ++    + +  +    + +   G F     VELS++  
Sbjct: 108 LNIAEMLRLDVPIAM-------KLAFEGIKDSEYKTRDTTISDLGGF---ENVELSVLLC 157

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           +   I  LN E+R  D  T+VLS             LMLGDIV++ E    +A   G   
Sbjct: 158 NDEFIRKLNKEWRDEDHATDVLSMSQHIPEL-KLPILMLGDIVISVETAARQAEERGHTL 216

Query: 123 ENHLVHLIIHGFLHLLGYDHV 143
            + +  L++HG LHLLG+DH 
Sbjct: 217 LDEIRILMVHGLLHLLGFDHE 237


>gi|332969799|gb|EGK08810.1| metal-dependent hydrolase [Psychrobacter sp. 1501(2011)]
          Length = 184

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 3/120 (2%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--GCSSLMLGDIVLAYE 109
           +   +L +  TDS     LN E R  D  TN+LS+P+   +        + LG++V+ +E
Sbjct: 62  QKPKQLGVYLTDSVEGRELNLEARDKDYATNILSYPSDLPAFILTEMLEIALGELVICHE 121

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPY 168
           ++E +A    K   +H  HL++HG LHLLG+DH    ++   MEG E +ILE LGI +PY
Sbjct: 122 VVEQQAREQHKTVADHATHLLVHGILHLLGFDHELGQEEQDEMEGFEIAILEKLGIANPY 181


>gi|240172994|ref|ZP_04751652.1| putative metalloprotease [Mycobacterium kansasii ATCC 12478]
          Length = 178

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V  K   N             ELS+V  D+  +  L
Sbjct: 1   MSIEVSNESGIDVSETELVSVARFVIDKMDVN----------PGAELSMVLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAAEQAAAAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 111 ELALLTIHGVLHLLGYDHGEPDEEREMFALQERLLEEW 148


>gi|90961874|ref|YP_535790.1| hypothetical protein LSL_0897 [Lactobacillus salivarius UCC118]
 gi|122449026|sp|Q1WTU0|RRMF_LACS1 RecName: Full=Probable rRNA maturation factor
 gi|90821068|gb|ABD99707.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118]
          Length = 159

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 19/166 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL+I  +      E       ++   K V     K   + E+  E+S+   ++ +I  +
Sbjct: 1   MDLEIFDDTNSVPAE-------KIQLVKDVLEFSGKYLELPED-TEMSVTLMNNEQIHEI 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANVLG 119
           N +YRG+DK T+V+SF       D                 +GD++++ + ++ +A  LG
Sbjct: 53  NLKYRGVDKATDVISFAIEEDDPDELPIILPDDVDFEEPKNIGDMMISMDKVKEQAEYLG 112

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +  L  L +HGFLHL GYDH+  +D  VM  L+R IL+  G+ 
Sbjct: 113 HSEDRELGFLTVHGFLHLNGYDHMKAEDEKVMFKLQRDILDAYGLK 158


>gi|302206650|gb|ADL10992.1| Putative metalloprotease [Corynebacterium pseudotuberculosis C231]
 gi|308276893|gb|ADO26792.1| Putative metalloprotease [Corynebacterium pseudotuberculosis I19]
          Length = 196

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 16/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+    D ++   L +V            G        E+++   D   +  L
Sbjct: 1   MSIEVVNESGC--DGVNEEALIDVA-------TFVLGEMDVHPDAEVTISVVDVPTMSDL 51

Query: 71  NFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +  +  ++ PT+V+SFP            +      +LGDI+L  +    +A   G +  
Sbjct: 52  HVRWMDLEGPTDVMSFPMDELTPGMGRPDAGAPGPALLGDIILCPDFAMKQAEKAGHDLG 111

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L  L  HG LHLLGYDH++  D   M  L+  +L D 
Sbjct: 112 HELALLTTHGCLHLLGYDHIEPADEQTMFSLQNELLSDW 150


>gi|300858949|ref|YP_003783932.1| hypothetical protein cpfrc_01532 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686403|gb|ADK29325.1| hypothetical protein cpfrc_01532 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302331199|gb|ADL21393.1| Putative metalloprotease [Corynebacterium pseudotuberculosis 1002]
          Length = 196

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 16/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+    D ++   L +V            G        E+++   D   +  L
Sbjct: 1   MSIEVVNESGC--DGVNEEALIDVA-------TFVLGEMDVHPDAEVTISVVDVPTMSDL 51

Query: 71  NFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +  +  ++ PT+V+SFP            +      +LGDI+L  +    +A   G +  
Sbjct: 52  HVRWMDLEGPTDVMSFPMDELTPGMGRPDAGAPGPALLGDIILCPDFAMKQAEKAGHDLG 111

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L  L  HG LHLLGYDH++  D   M  L+  +L D 
Sbjct: 112 HELALLTTHGCLHLLGYDHIEPADEQTMFSLQNELLSDW 150


>gi|194476814|ref|YP_002048993.1| hypothetical protein PCC_0342 [Paulinella chromatophora]
 gi|171191821|gb|ACB42783.1| hypothetical protein PCC_0342 [Paulinella chromatophora]
          Length = 186

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 15/174 (8%)

Query: 7   NLPRLDLQIAVE-----NALWGDEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLV 60
           + P LDL   +E       +W D      L   +F   +S+L S+     +  I  L L 
Sbjct: 4   SFPDLDLAFRIECKELSTGIWTDPNKGYKLWHELFRVWLSDLSSELPTIFQAEIYTLGLR 63

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFP---------TAFASSDGCSSLMLGDIVLAYEII 111
             +  +I+ +N ++R  DKPT+VLSF           + ++      + LGDI+++ E  
Sbjct: 64  LINDTQIQKINRDWRQNDKPTDVLSFAANSAEVFHSMSESNIQLNKLVELGDIIISLESA 123

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             +A  L    E  L  L  HG LHLLG+DH ++     M   +  ++  L   
Sbjct: 124 ARQARELNHSLEEELHWLASHGLLHLLGWDHPNEILLNTMLRRQEKLILKLEYK 177


>gi|258542172|ref|YP_003187605.1| hypothetical protein APA01_10760 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633250|dbj|BAH99225.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256636309|dbj|BAI02278.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256639362|dbj|BAI05324.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256642418|dbj|BAI08373.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645473|dbj|BAI11421.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648526|dbj|BAI14467.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651579|dbj|BAI17513.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654570|dbj|BAI20497.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 168

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 16/156 (10%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +I + +  W   +H     E +  +A++     G          ++V      +  LN  
Sbjct: 26  EILIRDRRWRSYVHNP---EQLVWRALAACSEYGGLPD------TVVLATDREVRELNGR 76

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           +RG  +PTNVL+F       +    +  GDI+LA E +  EA   GK   +HL HL+IHG
Sbjct: 77  HRGKHRPTNVLTF-------EPPPGITGGDIILALETVVREARKAGKPVADHLAHLVIHG 129

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            LHL GYDH    +A  ME LE  +L  L + +P++
Sbjct: 130 SLHLAGYDHHHPGEAREMEMLESRLLSRLRVPNPWK 165


>gi|291550420|emb|CBL26682.1| conserved hypothetical protein TIGR00043 [Ruminococcus torques
           L2-14]
          Length = 165

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 16/158 (10%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            +E +++   +     A+    +          E++L+ T++ +I  +N E RGID+PT+
Sbjct: 6   EEEGNIKLDFDTEEIAALVIDAALELADCPYEAEINLLLTENAQIHEMNLEQRGIDRPTD 65

Query: 83  VLSFPTAFASSDGC----------------SSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           VLSFP       G                   LMLGDIV++ E +  +A   G   +   
Sbjct: 66  VLSFPMIEYEEPGDFSVIDEESAEAFNPESGELMLGDIVISKEKVLSQAEEYGHLPKREY 125

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             LI H  LHL GYDH+ D++  VME  ++ I+E +GI
Sbjct: 126 AFLIAHSMLHLFGYDHMVDEERVVMEAKQKEIMEKVGI 163


>gi|186681803|ref|YP_001864999.1| metalloprotease [Nostoc punctiforme PCC 73102]
 gi|186464255|gb|ACC80056.1| protein of unknown function UPF0054 [Nostoc punctiforme PCC 73102]
          Length = 179

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 16/171 (9%)

Query: 11  LDLQIAVENALWGD--------EIHLRTLCEVVFAKAVSNLIS--KGYFVKENIVELSLV 60
           L +++ VE++ +          E     +    +    ++ +   +         E+ L 
Sbjct: 3   LSVELYVEDSFYDLSPTTSVKIEDTDTRIPSETWENWFNHWLEILQPQIPPAPSYEIGLC 62

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------SLMLGDIVLAYEIIEIE 114
            TD  +I+ LN +YR  +KPT+VL+F                  L LGDI+++ +  + +
Sbjct: 63  LTDDSQIQELNAQYRQQNKPTDVLAFAALEVDFPQSKEMLASVPLYLGDIIVSVDTAQRQ 122

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           A          L  L  HG LHLLG+DH D++    M   +  +L  +GI 
Sbjct: 123 AKQQEHSLPTELAWLASHGLLHLLGWDHPDEESLGRMLKQQVRLLNAIGIA 173


>gi|283783326|ref|YP_003374080.1| metalloprotein, YbeY family [Gardnerella vaginalis 409-05]
 gi|283441013|gb|ADB13479.1| metalloprotein, YbeY family [Gardnerella vaginalis 409-05]
          Length = 186

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   I  L+  +  ++ PT+V+SFP       S +  S  MLGD+V+   + +
Sbjct: 36  DLSITFVDPEPIACLHERWMNLEGPTDVMSFPMDELTPGSDEKVSEGMLGDLVICPWVAQ 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   ++   M GL+R ++
Sbjct: 96  QQALAAGHSTMEEMLLLTIHGILHLLGYDHTTPEEEKQMFGLQRQLM 142


>gi|262037729|ref|ZP_06011171.1| putative metalloprotease [Leptotrichia goodfellowii F0264]
 gi|261748201|gb|EEY35598.1| putative metalloprotease [Leptotrichia goodfellowii F0264]
          Length = 154

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 7/149 (4%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
            E   + DE  +    + +         S      EN   LSL+  D+  I  +N EYR 
Sbjct: 11  NEIEEFLDEKKIENFIKFILENEFKEEYS------ENDYYLSLLIADNKIIRKINKEYRN 64

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            D  T+V+SF      + G    +LGDI+++ E ++ +A   G   E    +++ HG LH
Sbjct: 65  KDLETDVISFAYNETENIG-GMNVLGDIIISLERVKSQAEDYGHSEEREFYYVLCHGMLH 123

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LLGYDH++++D  VM   E  IL+     
Sbjct: 124 LLGYDHIEEEDKKVMREKEEKILKQFNYT 152


>gi|291302084|ref|YP_003513362.1| hypothetical protein Snas_4626 [Stackebrandtia nassauensis DSM
           44728]
 gi|290571304|gb|ADD44269.1| protein of unknown function UPF0054 [Stackebrandtia nassauensis DSM
           44728]
          Length = 156

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+   G E+   ++C+V          +        + +LS++  D   +  L
Sbjct: 1   MPIEVANES---GAEVGTESICDVARH-------ALSEMGVHPLADLSILVVDETYMSEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF--------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           N  + G   PT+VL+FP             S+  +  +LGD+VL  E+ E +A   G   
Sbjct: 51  NHRWMGAAGPTDVLAFPMDELSVGRGPSNDSEPAAETLLGDVVLCPEVAERQAAKAGHST 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            + L  L +HG LH+LGYDH +  +A  M GL++S+L+  
Sbjct: 111 ADELHMLTVHGVLHILGYDHAEPDEAKQMFGLQQSLLDSW 150


>gi|227503130|ref|ZP_03933179.1| metalloprotease [Corynebacterium accolens ATCC 49725]
 gi|227076191|gb|EEI14154.1| metalloprotease [Corynebacterium accolens ATCC 49725]
          Length = 206

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF-----------ASSDGCSSLMLGD 103
            E ++   D   IE L+  +  ++ PT+V+SFP                +      MLGD
Sbjct: 36  AECTITCVDLKSIEDLHIRWMDLEGPTDVMSFPMDELTPGATSGGGRPDAADPGPAMLGD 95

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           IVL  E    +A+  G    + L  L +HG LHLLGYDH    +   M   +  +L D 
Sbjct: 96  IVLCPEFALRQADAAGHSLGHELALLTVHGCLHLLGYDHATAAEEKEMFARQNELLADW 154


>gi|329118104|ref|ZP_08246816.1| metal-dependent hydrolase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465764|gb|EGF12037.1| metal-dependent hydrolase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 165

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 12/161 (7%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           RLDL    +++        +   E  F   +   + + Y       E+SL+  D      
Sbjct: 16  RLDLHFDNQSSA-------QAPAENQFRLWIWQAVKRHY----RRAEISLILLDEPAARA 64

Query: 70  LNFEYRGIDKPTNVLSFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            N +YRG D  TNVLSF      +    S  + GD+V+  +I+  EA   GK  E H  H
Sbjct: 65  CNRDYRGKDYATNVLSFALDEGETCAPLSDGLHGDLVICPQIVLKEAAEQGKTPEQHYAH 124

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           L IHG LHL+GYDH++D +A  ME LE  +L  L   DPY+
Sbjct: 125 LTIHGTLHLMGYDHIEDTEAEEMETLETELLNQLAYPDPYK 165


>gi|227495952|ref|ZP_03926263.1| metalloprotease [Actinomyces urogenitalis DSM 15434]
 gi|226834506|gb|EEH66889.1| metalloprotease [Actinomyces urogenitalis DSM 15434]
          Length = 152

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +  ++  E  +  D      L + V      N             EL+++F D   +  L
Sbjct: 1   MTTEVNNETDVEIDGAEFAALADHVLRAMHVN----------PQAELNILFIDPEPMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  +  +  PT+V+SFP              +  LGDIVL  ++   +A   G      +
Sbjct: 51  HVRWLDLPGPTDVMSFPMDELRPGTEDSETPAGTLGDIVLCPQVAAKQALEAGHSAPEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLGYDH ++++   M  L+R +L
Sbjct: 111 LLLTTHGILHLLGYDHAEEEEKKEMFALQRQLL 143


>gi|222152665|ref|YP_002561840.1| putative metalloprotease [Streptococcus uberis 0140J]
 gi|254803968|sp|B9DRF7|RRMF_STRU0 RecName: Full=Probable rRNA maturation factor
 gi|222113476|emb|CAR41204.1| conserved hypothetical protein [Streptococcus uberis 0140J]
          Length = 166

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E  L   EI  +TL  + FA              ++  E+S+ F  + R   L
Sbjct: 1   MYIEMIDETGLVSQEIMEQTLDLLNFA---------ARKTGKDEKEMSVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSF------PTAFASSDGCSSLML-----------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S       P  F   D   +  L           G++ ++ +  + 
Sbjct: 52  NLEYRDTDRPTDVISLEYKPESPILFDERDLEENPDLAEMLSEFDAYIGELFISIDKAKE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 112 QAQEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 163


>gi|125624293|ref|YP_001032776.1| putative metalloprotease [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166231388|sp|A2RL98|RRMF_LACLM RecName: Full=Probable rRNA maturation factor
 gi|124493101|emb|CAL98065.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071075|gb|ADJ60475.1| putative metalloprotease [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 162

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 22/169 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E      EI  +T   + FA    +L        +   E+S+ F D+ R   L
Sbjct: 1   MYVELVDETGQVPSEIIEQTKEVLAFAAKKLDL--------KESTEMSVTFVDNARSHEL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSS--------------LMLGDIVLAYEIIEIEAN 116
           N +YR  D+PT+V+S       S+                    +G++ ++ +    +A 
Sbjct: 53  NLQYRETDRPTDVISLEYKPDESEFFFDEDMELPEELLEEMDPFIGELFISIDKAAEQAA 112

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E     L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 113 DYGHSIEREYGWLAVHGFLHINGYDHYTPEEESEMFALQEEILTAYGLT 161


>gi|167767292|ref|ZP_02439345.1| hypothetical protein CLOSS21_01811 [Clostridium sp. SS2/1]
 gi|167711267|gb|EDS21846.1| hypothetical protein CLOSS21_01811 [Clostridium sp. SS2/1]
 gi|291559398|emb|CBL38198.1| conserved hypothetical protein TIGR00043 [butyrate-producing
           bacterium SSC/2]
          Length = 170

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 22/169 (13%)

Query: 13  LQIAVENALWGD-EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           + I +EN   G+  I    +   V   A+       Y       E++L+ T++  I  +N
Sbjct: 1   MSIIIENEYEGEINIPYEKIAHEVIEAAID------YVDCPYECEVNLMLTNNETIHAIN 54

Query: 72  FEYRGIDKPTNVLSFPTAFASSD---------------GCSSLMLGDIVLAYEIIEIEAN 116
            E R ID+PT+VLSFP A                         +LGDIV++ + +  +A 
Sbjct: 55  KEQREIDRPTDVLSFPMAEYEEPADFSKIEEDPMAFDPESGEFLLGDIVISMDKVWEQAE 114

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E     LI H  LHL GYDH+++++   ME  +  IL      
Sbjct: 115 NYGHSREREYAFLIAHSMLHLFGYDHMEEEERKDMEKRQEEILTKTKYT 163


>gi|306836631|ref|ZP_07469597.1| metalloprotease [Corynebacterium accolens ATCC 49726]
 gi|304567461|gb|EFM43060.1| metalloprotease [Corynebacterium accolens ATCC 49726]
          Length = 206

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 11/120 (9%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF-----------ASSDGCSSLMLG 102
             E ++   D   IE L+  +  ++ PT+V+SFP                +      MLG
Sbjct: 35  DAECTITCVDLKSIEDLHIRWMDLEGPTDVMSFPMDELTPGATSGGGRPDAADPGPSMLG 94

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DIVL  E    +A+  G    + L  L +HG LHLLGYDH    +   M   +  +L D 
Sbjct: 95  DIVLCPEFALRQADAAGHSLGHELALLTVHGCLHLLGYDHATAAEEKEMFARQNELLADW 154


>gi|225351948|ref|ZP_03742971.1| hypothetical protein BIFPSEUDO_03553 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157195|gb|EEG70534.1| hypothetical protein BIFPSEUDO_03553 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 181

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP               +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAQLHMRWMNLEGPTDVMSFPMDELRPGDGRTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +    M GL+R +L
Sbjct: 96  QQALAAGHNTMEEMMLLTIHGILHLLGYDHATPEQERQMFGLQRQLL 142


>gi|118580450|ref|YP_901700.1| hypothetical protein Ppro_2034 [Pelobacter propionicus DSM 2379]
 gi|118503160|gb|ABK99642.1| protein of unknown function UPF0054 [Pelobacter propionicus DSM
           2379]
          Length = 127

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 2/113 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
               ELS+       I  +N +Y   D+PTNV+SF           SL LGD+V++ +  
Sbjct: 4   PEGTELSISIVGDRAIRRINRDYLNRDRPTNVISFSLQEGECGAIPSLALGDVVISADTA 63

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSILEDL 162
             EA   G EF   L  L++HG LHL GYDH    +++A  ME  E  +   L
Sbjct: 64  LREAEEGGMEFFERLCFLLLHGTLHLCGYDHERSGEEEAARMEAREVELFSVL 116


>gi|21909871|ref|NP_664139.1| putative metalloprotease [Streptococcus pyogenes MGAS315]
 gi|21904058|gb|AAM78942.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 175

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 26/182 (14%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M    + +  + +++  E      EI  +TL  + FA              +   E+S+ 
Sbjct: 1   MGSPSLTINLMYIEMIDETGQVSQEIMEQTLDLLNFA---------AQKTGKEEKEMSVT 51

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLS----------FPTAFASSDGCSSLM-------LGD 103
           F  + R   LN EYR  D+PT+V+S          F     ++D   + M       +G+
Sbjct: 52  FVTNERSHELNLEYRDTDRPTDVISLEYKPETPILFSQEDLAADPSLAEMMAEFDAYIGE 111

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + ++ +    ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G
Sbjct: 112 LFISIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEILTAYG 171

Query: 164 IN 165
           + 
Sbjct: 172 LT 173


>gi|237785903|ref|YP_002906608.1| putative metalloprotease [Corynebacterium kroppenstedtii DSM 44385]
 gi|259646826|sp|C4LJR0|RRMF_CORK4 RecName: Full=Probable rRNA maturation factor
 gi|237758815|gb|ACR18065.1| conserved hypothetical protein [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 202

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + +++  E+   G +E  L  + +    +   +             ++++   D   IE 
Sbjct: 1   MSIEVFNESGYDGVNEEALIDVAQFALMRMDIH----------PAADMTISIVDEPTIED 50

Query: 70  LNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           L+  +  ++ PT+V+SFP            +D     MLGDIVL     E +A+  G   
Sbjct: 51  LHVRWLNLEGPTDVMSFPMDELTPGSGRPDADAPGPAMLGDIVLCPAFAERQAHRAGHGL 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            + L  L +HG LHLLGYDHV  ++   M  L+  IL D 
Sbjct: 111 GHELSLLTVHGILHLLGYDHVAPEEERRMFALQNDILADW 150


>gi|145352030|ref|XP_001420362.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580596|gb|ABO98655.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 411

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELS+       I +LN  YR  D  T+VLSFP            +LGD++++ +    +
Sbjct: 4   CELSVALCSDEYIRSLNAGYREKDSATDVLSFPAES----FGPMAVLGDVIVSVDTASAQ 59

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLG 163
           A  +G    +    L++HG LHLLG DH   + +A VM   E+ +L+ LG
Sbjct: 60  AREVGHSLRDECRVLLVHGTLHLLGMDHEVSESEAEVMAAAEQEVLKALG 109


>gi|296116297|ref|ZP_06834913.1| hypothetical protein GXY_10882 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977116|gb|EFG83878.1| hypothetical protein GXY_10882 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 192

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 14/164 (8%)

Query: 12  DLQIAVENALWGDEIHLRTL-CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           D+ +++    W   +       +     A+  L   G         +++V  D   +  L
Sbjct: 26  DIDVSITERRWHRAMPNPAREVQRAVRAAMRELDVSGA--------VTVVLADDLTVRRL 77

Query: 71  NFEYRGIDKPTNVLSF---PTAFASSDGCSSLML--GDIVLAYEIIEIEANVLGKEFENH 125
           N  +RG +KPTNVL+F   P  +A +D  S + L  GDI+LA+  +E EA   G+   NH
Sbjct: 78  NHLHRGRNKPTNVLTFEYAPADYAPTDSGSGIWLWGGDIILAFATVEREARAAGRSVRNH 137

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
           ++HL++HG LHL GYDH    DA  ME  E  IL  +GI +P++
Sbjct: 138 MMHLLVHGVLHLSGYDHHHAGDARAMEMEESRILGRMGIPNPWK 181


>gi|296119867|ref|ZP_06838421.1| putative metalloprotease [Corynebacterium ammoniagenes DSM 20306]
 gi|295967021|gb|EFG80292.1| putative metalloprotease [Corynebacterium ammoniagenes DSM 20306]
          Length = 191

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 9/120 (7%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF---------ASSDGCSSLMLG 102
              VEL++   D   IE L+  +  ++ PT+V+SFP              +      MLG
Sbjct: 33  NPDVELTMTCVDLETIEELHVRWMDLEGPTDVMSFPIDEITPGAMTPRPDAPDMGPAMLG 92

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DIVL     E +A+  G    + L  L  HG LHLLGYDH    +   M  L+  +L D 
Sbjct: 93  DIVLCPAFAERQADAAGHSLSHELALLTTHGCLHLLGYDHGTPSEEQEMFALQNELLADW 152


>gi|254432649|ref|ZP_05046352.1| hypothetical protein CPCC7001_2542 [Cyanobium sp. PCC 7001]
 gi|197627102|gb|EDY39661.1| hypothetical protein CPCC7001_2542 [Cyanobium sp. PCC 7001]
          Length = 194

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 19/177 (10%)

Query: 2   SVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYF-VKENIVELSLV 60
           +     +P + L +A E A            +      ++ L  +    ++     LSL 
Sbjct: 9   TADSAEVPAVALDLAFEAAPGLATGLSANAWQQELQGWLTQLRPELPPRLQARAYSLSLS 68

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------------------MLG 102
             D   I  LN E+R    PT+VL+F       DG   L                   LG
Sbjct: 69  LVDDAGIAALNQEWREKPGPTDVLAFAAQDDDLDGLPPLAPGPASAGLEDELEEEPLELG 128

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           DIV++ +    +A   G   E  L  L  HG LHLLG+DH D+     M   + ++L
Sbjct: 129 DIVISVDTALRQAPEHGHSLEEELRFLASHGLLHLLGWDHPDEASLATMLARQDALL 185


>gi|251781164|ref|ZP_04824084.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243085479|gb|EES51369.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 166

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 19/146 (13%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF----- 90
             K +   + +      +  E+SL+F D+  I  +N E R ID+ T+VLSFP        
Sbjct: 21  LEKVIEFALKEEDVNIPS--EISLLFVDNEEIREINNETRNIDRATDVLSFPMLDYPDKK 78

Query: 91  ------------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
                        +      L+LGDIVL+ E    ++      +E    +L++H  LHLL
Sbjct: 79  VFKEVYTENDFSEADFDGDDLVLGDIVLSLERALEQSKEYNHSYEREASYLVVHSVLHLL 138

Query: 139 GYDHVDDKDACVMEGLERSILEDLGI 164
           GYDH++++D   M   E  IL  L I
Sbjct: 139 GYDHMEEEDKVKMRKREEEILTALDI 164


>gi|227890900|ref|ZP_04008705.1| metal-dependent hydrolase [Lactobacillus salivarius ATCC 11741]
 gi|227867309|gb|EEJ74730.1| metal-dependent hydrolase [Lactobacillus salivarius ATCC 11741]
          Length = 159

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 19/166 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +DL+I  +      E       ++   K V     K   + E+  E+S+   ++ +I  +
Sbjct: 1   MDLEIFDDTNSVPAE-------KIQLVKDVLEFSGKYLELPED-TEMSVTLMNNEQIHEI 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCS-----------SLMLGDIVLAYEIIEIEANVLG 119
           N +YRG+DK T+V+SF       D                 +GD++++ + ++ +A  L 
Sbjct: 53  NLKYRGVDKATDVISFAIEEDDPDELPIILPDDVDFEEPKNIGDMMISMDKVKEQAEYLD 112

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +  L  L +HGFLHL GYDH+  +D  VM  L+R IL+  G+ 
Sbjct: 113 HSEDRELGFLTVHGFLHLNGYDHMKAEDEKVMFKLQRDILDAYGLK 158


>gi|288905824|ref|YP_003431046.1| hypothetical protein GALLO_1631 [Streptococcus gallolyticus UCN34]
 gi|306831913|ref|ZP_07465068.1| probable metalloprotease [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|306834027|ref|ZP_07467148.1| probable metalloprotease [Streptococcus bovis ATCC 700338]
 gi|325978859|ref|YP_004288575.1| putative metalloprotease [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732550|emb|CBI14122.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|304423815|gb|EFM26960.1| probable metalloprotease [Streptococcus bovis ATCC 700338]
 gi|304425839|gb|EFM28956.1| probable metalloprotease [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178787|emb|CBZ48831.1| putative metalloprotease [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 165

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV------ 83
            + E +  + +  L        ++  E+++ F  + R   LN EYR  D+PT+V      
Sbjct: 11  QVSEAIKKQTLDLLQFAAEKTGKDNKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 84  ----LSFPTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
               LSF       +   + ML       G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PESSLSFSEEDLEENPELAEMLDEFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEKEMFTLQEEILTAYGLK 163


>gi|332522950|ref|ZP_08399202.1| translation metalloprotein YbeY [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314214|gb|EGJ27199.1| translation metalloprotein YbeY [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 165

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 19/159 (11%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE  L +   +   K + N  +K     E   E+S+ F  + R   LN EYR  D+PT+V
Sbjct: 7   DETGLVSQEIMEQTKDLLNFAAKKTGKAEK--EMSVTFVTNERSHELNLEYRDTDRPTDV 64

Query: 84  LSF------PTAFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHL 126
           +S       P  F  SD   +  L           G++ ++ +    +A   G  FE  +
Sbjct: 65  ISLEYKPERPILFDESDLEDNPDLAEMLAEFDAYIGELFISIDKAREQAQEYGHSFEREM 124

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 125 GFLAVHGFLHITGYDHYTPEEEKEMFTLQEEILTAYGLT 163


>gi|320527302|ref|ZP_08028487.1| conserved hypothetical protein TIGR00043 [Solobacterium moorei
           F0204]
 gi|320132326|gb|EFW24871.1| conserved hypothetical protein TIGR00043 [Solobacterium moorei
           F0204]
          Length = 152

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 2/117 (1%)

Query: 46  KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCSSLMLGD 103
           +        +E+S+ F  S  I  +N +YRGID+PT+V+SF       +        LGD
Sbjct: 28  EKELKLAKDLEISITFVRSRTIHIINRDYRGIDRPTDVISFAIRDGLEAFIPDEEKDLGD 87

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           + +  +    +A   G   +  +  L  HG LH LGYDH++  D   M  L+  IL+
Sbjct: 88  LFINIDYARKQAREYGHSEKREMGFLFTHGLLHCLGYDHMNPDDEKKMFALQDRILD 144


>gi|116333396|ref|YP_794923.1| metal-dependent hydrolase [Lactobacillus brevis ATCC 367]
 gi|122269917|sp|Q03SD0|RRMF_LACBA RecName: Full=Probable rRNA maturation factor
 gi|116098743|gb|ABJ63892.1| Predicted metal-dependent hydrolase [Lactobacillus brevis ATCC 367]
          Length = 162

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 13/134 (9%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------- 97
           +  Y    +  E+S+   ++  I  +N +YRG+D+ T+V+SF       +          
Sbjct: 28  AGKYLKLADNTEMSVTLMNNEDIHRINQQYRGVDRATDVISFAIEDDDEEAADFPLVMDD 87

Query: 98  ------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                    +GDI ++ + +  +A+ LG  +E  L  L++HGFLHL GYDH++ +D  VM
Sbjct: 88  ELAAEIPENIGDIFVSMDKVAEQADYLGHSYERELGFLVVHGFLHLNGYDHMEPEDEKVM 147

Query: 152 EGLERSILEDLGIN 165
             L+  IL+  G+ 
Sbjct: 148 FKLQADILDAYGLK 161


>gi|81428486|ref|YP_395486.1| hypothetical protein LSA0876 [Lactobacillus sakei subsp. sakei 23K]
 gi|123564327|sp|Q38XA4|RRMF_LACSS RecName: Full=Probable rRNA maturation factor
 gi|78610128|emb|CAI55177.1| Hypothetical protein LCA_0876 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 158

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 18/165 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D+QI        DE  +    ++   + V     +   + E+  E+S+ F  + RI  +
Sbjct: 1   MDIQII-------DETKIVPEAQIKLVEDVLEFAGQKLELAED-TEMSVTFVTNERIRQI 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM----------LGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF       +                +GD+ ++ E    +A   G 
Sbjct: 53  NQEYRNTDRATDVISFAIEEDPEEEGLPANFEELFDIPKNIGDLFVSLEKAAEQAETYGH 112

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            FE  L + ++HGFLHL GYDH+  +D   M  L+ +IL++ G+ 
Sbjct: 113 SFERELGYTMVHGFLHLNGYDHIHTEDEVKMIPLQETILDEFGLK 157


>gi|327382542|gb|AEA54018.1| Probable rRNA maturation factor [Lactobacillus casei LC2W]
          Length = 120

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLA 107
               E+S+       IE +N EYR  D+ T+V+SF       D       +  +GD+ + 
Sbjct: 2   PENTEMSITLVGDDEIERINREYRETDRVTDVISFAIEEGEDDLPLLPGMAKNIGDLFID 61

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              +   A   G  FE  L + ++HGFLHL GYDH+  +D  VM  L++ IL   G+ 
Sbjct: 62  PLTVRRHAEEYGHSFERELGYTVVHGFLHLNGYDHIKPEDEAVMIPLQKKILAAYGLT 119


>gi|251781920|ref|YP_002996222.1| putative metalloprotease [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390549|dbj|BAH81008.1| hypothetical protein SDEG_0506 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 182

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 26/178 (14%)

Query: 5   KVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
            + +  + +++  E      EI  +T+  + FA              +   E+S+ F  +
Sbjct: 12  PLTINLMYIEMIDETGQVSQEIMEQTIDLLNFA---------AQKTGKEEKEMSVTFVTN 62

Query: 65  HRIETLNFEYRGIDKPTNVLS----------FPTAFASSDGCSSLM-------LGDIVLA 107
            R   LN EYR  D+PT+V+S          F     ++D   + M       +G++ ++
Sbjct: 63  ARSHELNLEYRDTDRPTDVISLEYKPETPILFSQDDLAADPSLAEMMAEFDAYIGELFIS 122

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            +    +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 123 IDKAREQAEDYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 180


>gi|94498013|ref|ZP_01304577.1| predicted metal-dependent hydrolase [Sphingomonas sp. SKA58]
 gi|94422596|gb|EAT07633.1| predicted metal-dependent hydrolase [Sphingomonas sp. SKA58]
          Length = 169

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/165 (35%), Positives = 83/165 (50%), Gaps = 8/165 (4%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +D+ +  E   W D    ++L +     A+++    G+       E+++  T    +  
Sbjct: 1   MIDVALLHETG-WPD-ADWQSLADRAVTAAIAHSPYAGFAAAPTHYEIAVKLTSDEEVHG 58

Query: 70  LNFEYRGIDKPTNVLSFPTAFAS------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           LN  YR  DKPTNVLSFP           +     ++LGDIVLA  +   EA   G    
Sbjct: 59  LNRAYRDKDKPTNVLSFPMVQDDLLQATANTDDGEVLLGDIVLAEGVCAAEAADKGISIL 118

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +H  HLI+HG  HLLGYDH+DD +A  ME LE + L  LG+ DPY
Sbjct: 119 DHATHLIVHGTFHLLGYDHMDDAEAEAMEALEIAALASLGLADPY 163


>gi|300088389|ref|YP_003758911.1| hypothetical protein Dehly_1299 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299528122|gb|ADJ26590.1| protein of unknown function UPF0054 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 161

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 22/165 (13%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           ++D+ +  E       + LR+L   +     +   S          E+ +  T   ++  
Sbjct: 2   KIDITVDREYKKAVSVLWLRSLARQILVAQCAEAGS----------EMGIYITGQEKMRE 51

Query: 70  LNFEYRGIDKPTNVLSFPTA------------FASSDGCSSLMLGDIVLAYEIIEIEANV 117
           LN  YRG DKPT+VLSF                       SL LG++V++    E++A  
Sbjct: 52  LNRVYRGKDKPTDVLSFSFYVKEASGSAETDVEFPVPEDGSLHLGELVISLPQAELQAAE 111

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           LG   +  L  L+IHG +HLLG+DH  D DA +ME  E  IL+ L
Sbjct: 112 LGHSVKTELARLLIHGVMHLLGFDHEKDADAEIMEARELEILKQL 156


>gi|304438430|ref|ZP_07398370.1| metal-dependent hydrolase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368513|gb|EFM22198.1| metal-dependent hydrolase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 153

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I +      + + +         +AV   ++ G        E+S+  TD   I  LN 
Sbjct: 1   MEITI--GKEPENLDVPQEALDAVRRAV---LTVGELYGVMDAEVSVTLTDDAHIHVLNR 55

Query: 73  EYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           +YR +D+PT+VLSF    +      D    ++LGD+V++ E +  +A   G      L  
Sbjct: 56  DYRSVDRPTDVLSFALTESEEPAILDAPYGVVLGDLVISLERVAAQAEEYGHSVLRELSF 115

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L +HG LHLLGYDH++++D   ME  +R +++ LGI 
Sbjct: 116 LTVHGMLHLLGYDHIEEEDRVEMEEEQRHVMDVLGIA 152


>gi|188588423|ref|YP_001920266.1| putative metalloprotease [Clostridium botulinum E3 str. Alaska E43]
 gi|238689660|sp|B2V2J8|RRMF_CLOBA RecName: Full=Probable rRNA maturation factor
 gi|188498704|gb|ACD51840.1| conserved hypothetical protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 166

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 19/146 (13%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD- 94
             K +   + +      +  E+SL+F D+  I  +N E R ID+ T+VLSFP        
Sbjct: 21  LEKVIEFALKEEDVNIPS--EISLLFVDNEEIREINNETRNIDRATDVLSFPMLDYPEKK 78

Query: 95  ----------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
                               L+LGDIVL+ E    ++      +E    +L++H  LHLL
Sbjct: 79  VFKEVYTENDFSEADFDGDDLVLGDIVLSLERALEQSKEYNHSYEREASYLVVHSVLHLL 138

Query: 139 GYDHVDDKDACVMEGLERSILEDLGI 164
           GYDH+++ D   M   E  IL  L I
Sbjct: 139 GYDHMEEDDKVKMRKREEEILTALDI 164


>gi|228906475|ref|YP_932284.2| unkown domain/metalloprotease fusion protein [Azoarcus sp. BH72]
          Length = 271

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 22/172 (12%)

Query: 5   KVNLPRLDLQIAV-----ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSL 59
              LP L L++       + A    +  +R   +                      E+++
Sbjct: 115 AAKLPVLTLEVQKALDGGDKAAAPKKHQIRRWAQAALRT---------------DAEVTV 159

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG--CSSLMLGDIVLAYEIIEIEANV 117
                     LN  YRG D  TNVL+F               ++GD+VL   ++  EA  
Sbjct: 160 RLVGETEGRALNLGYRGKDYATNVLTFVYGEEGGAPAVEGMPLMGDLVLCVPVVVREAAE 219

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            GK  + H  HL++HG LHL G DH DD +A  ME  E +IL  LG  +PY 
Sbjct: 220 QGKALDAHFAHLVVHGMLHLQGLDHEDDAEAEAMETAETNILRGLGYANPYA 271


>gi|255020723|ref|ZP_05292783.1| hypothetical protein ACA_1687 [Acidithiobacillus caldus ATCC 51756]
 gi|254969839|gb|EET27341.1| hypothetical protein ACA_1687 [Acidithiobacillus caldus ATCC 51756]
          Length = 169

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/164 (35%), Positives = 81/164 (49%), Gaps = 3/164 (1%)

Query: 8   LPRLDLQIAVENALWGD--EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
            P L L   V+ +L  D      + LC    A A++    +        + LSL F  + 
Sbjct: 2   TPALRLYRRVDESLEPDLPPPPGQRLCRTAIAAALTVPSPRLANGDGVRIGLSLAFVGAA 61

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            +  LN ++R    PTN LSFPT   +        LGDIVLA  I+  EA   GK   +H
Sbjct: 62  AMAELNGQFRQRPYPTNCLSFPTPSGAG-PYRQDFLGDIVLAPAIVLREAVEQGKRPADH 120

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
             HL+IH  LHLLG+DH +  +A  ME LE  +L  +G+ DPY+
Sbjct: 121 YRHLLIHSTLHLLGFDHEEAAEAAEMEALETHLLAQMGVADPYQ 164


>gi|225873317|ref|YP_002754776.1| conserved hypothetical protein TIGR00043 [Acidobacterium capsulatum
           ATCC 51196]
 gi|225791778|gb|ACO31868.1| conserved hypothetical protein TIGR00043 [Acidobacterium capsulatum
           ATCC 51196]
          Length = 202

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA--FASSDGCSSLMLGDIVLAYEIIEI 113
           ++S++ T   +I   N E+RG +KPT+VLSFP A          + + GD+ ++ E  + 
Sbjct: 37  DVSVLLTGDKQIRRWNREFRGKNKPTDVLSFPAAPLDGPDGPIPAPIAGDLAISVETADR 96

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A          L  L++HG LHL GYDH  D     M  LE+ +   LG+ 
Sbjct: 97  QAAEHRHTLIEELKVLLLHGTLHLAGYDHETDN--GEMARLEQRLRIKLGLK 146


>gi|293400676|ref|ZP_06644821.1| putative metalloprotease [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305702|gb|EFE46946.1| putative metalloprotease [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 162

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSL-MLGDIVLAYEIIEIE 114
           S++F D   I  +N EYR ID+PT+V+SF         +    L  LGDI +  + +  +
Sbjct: 48  SIIFVDPAMIHEINREYRHIDRPTDVISFALKDEEDTYEMMEGLDELGDIFINVQAVVDQ 107

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           A   G      +  L  HG LHLLGYDH++  D  +M  L+  IL+ +
Sbjct: 108 AAEYGHSLRREVCFLFTHGLLHLLGYDHMEKDDEKIMFALQDVILDAI 155


>gi|152992855|ref|YP_001358576.1| metalloprotease [Sulfurovum sp. NBC37-1]
 gi|172048740|sp|A6Q9R0|RRMF_SULNB RecName: Full=Probable rRNA maturation factor
 gi|151424716|dbj|BAF72219.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 147

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 3/111 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-GCSSLMLGDIVLAYEIIEIE 114
           E+ L+ TD+  I+ LN EYR  D PT+VLSFP     ++     + LG IV++ + +   
Sbjct: 31  EIELIITDNENIQELNREYRDRDNPTDVLSFPLETPFTEQSVFDIPLGTIVISADFVRER 90

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           A   G   ++ L  L IHG LHLLGYDH  D+    M   ER I+E+ G+ 
Sbjct: 91  AKTYGHTEQDELKLLFIHGLLHLLGYDHETDE--GEMRQKEREIIEEFGLP 139


>gi|125538685|gb|EAY85080.1| hypothetical protein OsI_06436 [Oryza sativa Indica Group]
          Length = 543

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 10  RLDLQIAVENALWGDEI------HLRTLCEVVFAKAVSNLISKGYFVKEN---------I 54
            L++QI +E AL  D         L+         A  +L +  Y  ++N          
Sbjct: 99  ELNVQIGIEEALPDDPTILSIAEALQMDVAKAAKVAFDHLENSEYKTRDNCISDVNKYDT 158

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S++  D   I  LN E+R  D  T+VLS        D    L LGDIV++ +  + +
Sbjct: 159 VEVSILLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLD-IPILQLGDIVISIDTAQRQ 217

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           A   G    + +  L++HG LHLLG+DH 
Sbjct: 218 AEERGHTLHDEIRILMVHGLLHLLGFDHE 246


>gi|68535676|ref|YP_250381.1| putative metalloprotease [Corynebacterium jeikeium K411]
 gi|260578250|ref|ZP_05846166.1| metalloprotease [Corynebacterium jeikeium ATCC 43734]
 gi|123651314|sp|Q4JWP4|RRMF_CORJK RecName: Full=Probable rRNA maturation factor
 gi|68263275|emb|CAI36763.1| conserved hypothetical protein [Corynebacterium jeikeium K411]
 gi|258603552|gb|EEW16813.1| metalloprotease [Corynebacterium jeikeium ATCC 43734]
          Length = 182

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + +++  E+     +E  L  +                        ELS+   D   IE 
Sbjct: 1   MSIEVFNESGRGEVNEEELIDVARYALWT----------LDVHPAAELSIHIVDLETIED 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSD-------GCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           L+  +  +  PT+V+SFP    +           S  MLGDI+L  +  E +A   G   
Sbjct: 51  LHVRWMDLPGPTDVMSFPMDELTPGWGRKDAAEPSPAMLGDIMLCPDFAEGQATRAGHSL 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            + L  L +HG LHLLG+DHV  +D   M  L+  IL + 
Sbjct: 111 AHELDLLTVHGVLHLLGFDHVTPEDEQKMFALQNEILANW 150


>gi|168335125|ref|ZP_02693233.1| hypothetical protein Epulo_08803 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 153

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 9/158 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I  +  L+  E  L      V  + +            N +E+SL   D   I T+
Sbjct: 1   MHIDIDDQEGLFVLEPKLEQKIIEVIEECL------KLENISNDIEISLSIVDKETIRTI 54

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSS---LMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           N ++R ID+ T+VLSFP   A S+   S   ++LGDI++  +I + +A          + 
Sbjct: 55  NRDFREIDRDTDVLSFPQFEAQSEFVDSADVVILGDIIICLDIAKEQAVAYNHSLAREIC 114

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LI H   HLLGYDH+ + D  +M   +  +LE L I 
Sbjct: 115 FLIAHSCFHLLGYDHMTEDDEIIMFAKQDCVLETLKIT 152


>gi|187933939|ref|YP_001885105.1| metalloprotease [Clostridium botulinum B str. Eklund 17B]
 gi|238691633|sp|B2TM06|RRMF_CLOBB RecName: Full=Probable rRNA maturation factor
 gi|187722092|gb|ACD23313.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 166

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 17/126 (13%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-----------------GCSS 98
           E+SL+F D+  I  +N E R ID+ T+VLSFP                            
Sbjct: 39  EISLLFVDNEEIREINNETRNIDRATDVLSFPMLDYPEKKVFKEVYTENDFSEADFDGDD 98

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
           L+LGD+VL+ E    ++      +E    +L++H  LHLLGYDH++++D   M   E  I
Sbjct: 99  LVLGDVVLSLERALEQSKEYNHSYEREASYLVVHSVLHLLGYDHMEEEDKVKMRKREEEI 158

Query: 159 LEDLGI 164
           L  L I
Sbjct: 159 LTALDI 164


>gi|71903040|ref|YP_279843.1| putative metalloprotease [Streptococcus pyogenes MGAS6180]
 gi|71802135|gb|AAX71488.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS6180]
          Length = 182

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 26/179 (14%)

Query: 4   KKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTD 63
             + +  + +++  E      EI  +TL  + FA              +   E+S+ F  
Sbjct: 11  PSLTINLMYIEMIDETGQVSQEIMEQTLDLLNFA---------AQKTGKEEKEMSVTFVT 61

Query: 64  SHRIETLNFEYRGIDKPTNVLSF------PTAFASSDGCSSLML-----------GDIVL 106
           + R   LN EYR  D+PT+V+S       P  F+  D  +   L           G++ +
Sbjct: 62  NERSHELNLEYRDTDRPTDVISLEYKPETPILFSQEDFAADPSLAEMMAEFDAYIGELFI 121

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + +    ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 122 SIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEILTAYGLT 180


>gi|298252735|ref|ZP_06976529.1| metal-dependent hydrolase [Gardnerella vaginalis 5-1]
 gi|297533099|gb|EFH71983.1| metal-dependent hydrolase [Gardnerella vaginalis 5-1]
          Length = 188

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   I  L+  +  ++ PT+V+SFP       S +  S  MLGD+V+   + +
Sbjct: 36  DLSITFVDPEPIACLHERWMNLEGPTDVMSFPMDELTPGSDEKVSEGMLGDLVICPWVAQ 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   ++   M GL+R ++
Sbjct: 96  QQALAAGHSTMEEMLLLTIHGILHLLGYDHTTPEEEKQMFGLQRQLM 142


>gi|145558838|sp|A1K3J2|RRMF_AZOSB RecName: Full=Probable rRNA maturation factor
 gi|119669484|emb|CAL93397.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 252

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 22/172 (12%)

Query: 5   KVNLPRLDLQIAV-----ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSL 59
              LP L L++       + A    +  +R   +                      E+++
Sbjct: 96  AAKLPVLTLEVQKALDGGDKAAAPKKHQIRRWAQAALRT---------------DAEVTV 140

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG--CSSLMLGDIVLAYEIIEIEANV 117
                     LN  YRG D  TNVL+F               ++GD+VL   ++  EA  
Sbjct: 141 RLVGETEGRALNLGYRGKDYATNVLTFVYGEEGGAPAVEGMPLMGDLVLCVPVVVREAAE 200

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            GK  + H  HL++HG LHL G DH DD +A  ME  E +IL  LG  +PY 
Sbjct: 201 QGKALDAHFAHLVVHGMLHLQGLDHEDDAEAEAMETAETNILRGLGYANPYA 252


>gi|49388540|dbj|BAD25662.1| haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica
           Group]
 gi|49388674|dbj|BAD25858.1| haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica
           Group]
          Length = 543

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 10  RLDLQIAVENALWGDEI------HLRTLCEVVFAKAVSNLISKGYFVKEN---------I 54
            L++QI +E AL  D         L+         A  +L +  Y  ++N          
Sbjct: 99  ELNVQIGIEEALPDDPTILSIAEALQMDVAKAAKVAFDHLENSEYKTRDNCISDVNKYDT 158

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+S++  D   I  LN E+R  D  T+VLS        D    L LGDIV++ +  + +
Sbjct: 159 VEVSILLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLD-IPILQLGDIVISIDTAQRQ 217

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           A   G    + +  L++HG LHLLG+DH 
Sbjct: 218 AEERGHTLHDEIRILMVHGLLHLLGFDHE 246


>gi|313897363|ref|ZP_07830906.1| translation metalloprotein YbeY [Clostridium sp. HGF2]
 gi|312957733|gb|EFR39358.1| translation metalloprotein YbeY [Clostridium sp. HGF2]
          Length = 155

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIE 114
           S++F     I  +N +YRGID+PT+V+SF    +            LGDI +  E I  +
Sbjct: 41  SVIFVTPQMIHEMNRDYRGIDRPTDVISFAMKDSEDAYEVMEGEEELGDIFINIEAISAQ 100

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           A   G      +  L  HG LHLLGYDH+  +D  VM  L+  IL+D+
Sbjct: 101 AADYGHSLRREVCFLFTHGLLHLLGYDHMTPEDEAVMFQLQDVILDDI 148


>gi|163783493|ref|ZP_02178484.1| hypothetical protein HG1285_08769 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881257|gb|EDP74770.1| hypothetical protein HG1285_08769 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 142

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L +    K    ++     +     ELS++ TD   I  LN  YRG D+PT+VLSFP 
Sbjct: 11  RRLKKTWLRKRAELIL---RVLGVENSELSILLTDDEEIRELNRVYRGKDRPTDVLSFPI 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKD 147
                +    L+LGD+V++ +    +A  LG   E  +  L+ HG +HLLGYDH    ++
Sbjct: 68  GE---EVAGRLILGDVVISLDTARRQAEGLGHTLEEEVSRLLAHGIIHLLGYDHELGGEE 124

Query: 148 ACVMEGLERSILEDLG 163
                 LE  +  +LG
Sbjct: 125 EERFRALEERVNAELG 140


>gi|329116194|ref|ZP_08244911.1| translation metalloprotein YbeY [Streptococcus parauberis NCFD
           2020]
 gi|326906599|gb|EGE53513.1| translation metalloprotein YbeY [Streptococcus parauberis NCFD
           2020]
          Length = 176

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 26/173 (15%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + +++  E      EI  +T   + FA   +          ++  E+S+ F  + R   
Sbjct: 11  DMYIEMIDETGQVSQEIMKQTKDLLNFAATKT---------GKDQKEMSVTFVTNERSHE 61

Query: 70  LNFEYRGIDKPTNVLS----------FPTAFASSDGCSSLM-------LGDIVLAYEIIE 112
           LN EYR  D+PT+V+S          F      +D   + M       +G++ ++ +  +
Sbjct: 62  LNLEYRDTDRPTDVISLEYKPEIPILFDQGDMEADPDLAEMMAEFDAYIGELFISIDKAK 121

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            +A   G  FE  +  L +HGFLH+ GYDH    +   M  L+  IL   G+ 
Sbjct: 122 EQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPAEEKEMFTLQEEILTAYGLT 174


>gi|313891316|ref|ZP_07824934.1| translation metalloprotein YbeY [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313120383|gb|EFR43504.1| translation metalloprotein YbeY [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 165

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 19/159 (11%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           DE  L +   +   K + N  +K     E   E+S+ F  + R   LN EYR  D+PT+V
Sbjct: 7   DETGLVSQEIMEQTKDLLNFAAKKTGKSEK--EMSVTFVTTERSHELNLEYRDTDRPTDV 64

Query: 84  LSF------PTAFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHL 126
           +S       P  F  SD  ++  L           G++ ++ +    +A   G  FE  +
Sbjct: 65  ISLEYKPERPILFEESDLENNPDLAEMLAEFDAYIGELFISVDKAREQAQEYGHSFEREM 124

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 125 GFLAVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 163


>gi|218282278|ref|ZP_03488577.1| hypothetical protein EUBIFOR_01159 [Eubacterium biforme DSM 3989]
 gi|218216746|gb|EEC90284.1| hypothetical protein EUBIFOR_01159 [Eubacterium biforme DSM 3989]
          Length = 151

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 5/132 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVE--LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           + K   N++ +   V E   +  LS+++    +I  +N +YR +D+ T+V+SF      S
Sbjct: 17  YKKDFENILERACQVLERKGDWSLSVIYVTPEQIHEINRDYRNVDRATDVISFAIQDDMS 76

Query: 94  D---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           D         LGDI +  + I  +A+  G         L  HG LHL+GYDH+ ++D  V
Sbjct: 77  DMLVDEDQYELGDIFINVQAIRDQASAYGHSIRREACFLFCHGLLHLMGYDHMKEEDEKV 136

Query: 151 MEGLERSILEDL 162
           M  L+  IL++L
Sbjct: 137 MFALQDEILDEL 148


>gi|50913759|ref|YP_059731.1| putative metalloprotease [Streptococcus pyogenes MGAS10394]
 gi|71910201|ref|YP_281751.1| metalloprotease [Streptococcus pyogenes MGAS5005]
 gi|94988019|ref|YP_596120.1| putative metalloprotease [Streptococcus pyogenes MGAS9429]
 gi|94989898|ref|YP_597998.1| putative metalloprotease [Streptococcus pyogenes MGAS10270]
 gi|94991905|ref|YP_600004.1| putative metalloprotease [Streptococcus pyogenes MGAS2096]
 gi|94993783|ref|YP_601881.1| metalloprotease [Streptococcus pyogenes MGAS10750]
 gi|50902833|gb|AAT86548.1| Hypothetical Metal-Binding Protein [Streptococcus pyogenes
           MGAS10394]
 gi|71852983|gb|AAZ51006.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS5005]
 gi|94541527|gb|ABF31576.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS9429]
 gi|94543406|gb|ABF33454.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS10270]
 gi|94545413|gb|ABF35460.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS2096]
 gi|94547291|gb|ABF37337.1| hypothetical metal-binding protein [Streptococcus pyogenes
           MGAS10750]
          Length = 182

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 26/179 (14%)

Query: 4   KKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTD 63
             + +  + +++  E      EI  +TL  + FA              +   E+S+ F  
Sbjct: 11  PSLTINLMYIEMIDETGQVSQEIMEQTLDLLNFA---------AQKTGKEEKEMSVTFVT 61

Query: 64  SHRIETLNFEYRGIDKPTNVLS----------FPTAFASSDGCSSLM-------LGDIVL 106
           + R   LN EYR  D+PT+V+S          F     ++D   + M       +G++ +
Sbjct: 62  NERSHELNLEYRDTDRPTDVISLEYKPETPILFSQEDLAADPSLAEMMAEFDAYIGELFI 121

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + +    ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 122 SIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEILTAYGLT 180


>gi|297598866|ref|NP_001046349.2| Os02g0227000 [Oryza sativa Japonica Group]
 gi|255670736|dbj|BAF08263.2| Os02g0227000 [Oryza sativa Japonica Group]
          Length = 361

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 18/151 (11%)

Query: 10  RLDLQIAVENALWGDEI--------HLRTLCEVVFAKAVSNLISKGYFVKEN-------- 53
            L++QI +E AL  D           L+         A  +L +  Y  ++N        
Sbjct: 99  ELNVQIGIEEALPDDPTILVISIAEALQMDVAKAAKVAFDHLENSEYKTRDNCISDVNKY 158

Query: 54  -IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
             VE+S++  D   I  LN E+R  D  T+VLS        D    L LGDIV++ +  +
Sbjct: 159 DTVEVSILLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLD-IPILQLGDIVISIDTAQ 217

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
            +A   G    + +  L++HG LHLLG+DH 
Sbjct: 218 RQAEERGHTLHDEIRILMVHGLLHLLGFDHE 248


>gi|16331480|ref|NP_442208.1| metalloprotease [Synechocystis sp. PCC 6803]
 gi|2496791|sp|Q55142|RRMF_SYNY3 RecName: Full=Probable rRNA maturation factor
 gi|1001136|dbj|BAA10278.1| slr0053 [Synechocystis sp. PCC 6803]
          Length = 179

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 19/170 (11%)

Query: 15  IAVENALWGD-----------EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTD 63
           IAVE +L  D           E  L    +    + +  L         +  EL+L+FT 
Sbjct: 9   IAVELSLQTDLTGSAMASSGVEELLTNPWQGWCQRWLEYLAD--CLPPASSYELTLLFTG 66

Query: 64  SHRIETLNFEYRGIDKPTNVLSFPTAFAS------SDGCSSLMLGDIVLAYEIIEIEANV 117
             RI+ LN ++R  DKPT+VL+F             +    L LGDIV++ E  + +A  
Sbjct: 67  DRRIQELNRKFRHQDKPTDVLAFAALEGDFPLIESEETEEPLYLGDIVISLERADHQARE 126

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
            G   +  +V L  HG LHLLG+DH D+     M   +  +L  +G N P
Sbjct: 127 RGHSAKLEVVWLTAHGLLHLLGWDHPDEASLTTMLSEQSHLLTLIGQNPP 176


>gi|116072020|ref|ZP_01469288.1| hypothetical protein BL107_07709 [Synechococcus sp. BL107]
 gi|116065643|gb|EAU71401.1| hypothetical protein BL107_07709 [Synechococcus sp. BL107]
          Length = 180

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 4/138 (2%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           L+   E  F ++  +L       +   V L L FTD   I  LN E+R    PT+VLSF 
Sbjct: 32  LQQWIE--FIRSNPDLSCPSVVRQAPEVSLGLRFTDDAGITELNSEWRQRSGPTDVLSFA 89

Query: 88  TAFASSDGCSS--LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
               + D      + LGDI+++ +  + +A          L  LI HG LHLLG+DH D+
Sbjct: 90  ALDDTPDWLEGAAVELGDIIVSLDTAQRQAQDHDHSLGYELHWLISHGLLHLLGWDHPDE 149

Query: 146 KDACVMEGLERSILEDLG 163
           +    M  L+  +L+  G
Sbjct: 150 RSLRAMLDLQERLLDSTG 167


>gi|123169874|sp|Q14NW7|RRMF_SPICI RecName: Full=Probable rRNA maturation factor
 gi|110004475|emb|CAK98812.1| conserved hypothetical upf0054 protein [Spiroplasma citri]
          Length = 158

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 53/124 (42%), Gaps = 4/124 (3%)

Query: 46  KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM----L 101
           K        +ELSL+  D+     LN +YR  D   +V++F     +      L     L
Sbjct: 30  KTLLAITEPLELSLIIVDAQEQLELNQKYRHKDYVADVITFALEEENKIDLFELTGLRSL 89

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI + YE    +A             L  HG LH+LGYDH    D   M  L+R +L D
Sbjct: 90  GDIFICYEKALAQAAEYNHSPRREFAFLFTHGMLHILGYDHQTPADEEKMFNLQRKVLND 149

Query: 162 LGIN 165
           L IN
Sbjct: 150 LQIN 153


>gi|312196050|ref|YP_004016111.1| hypothetical protein FraEuI1c_2202 [Frankia sp. EuI1c]
 gi|311227386|gb|ADP80241.1| protein of unknown function UPF0054 [Frankia sp. EuI1c]
          Length = 188

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           + + IA E      DE+ L  L   V      N           + ELS++  ++  +  
Sbjct: 1   MSVFIANETGESDVDEVTLAGLARFVLDAMKVN----------PLAELSIMIVETAAMTD 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           L+  Y G D PT+VL+FP   A         D   + +LGD+VL  E+   +A   G   
Sbjct: 51  LHVRYMGEDGPTDVLAFPQDEAFESSYADSADNDPATLLGDVVLCPEVARKQAVTAGHSA 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +  L  L  HG LHLLGYDH +  +   M  L+  +L   
Sbjct: 111 QRELHLLCTHGILHLLGYDHAEQAEEREMFRLQEDLLTRW 150


>gi|19553485|ref|NP_601487.1| putative metalloprotease [Corynebacterium glutamicum ATCC 13032]
 gi|62391128|ref|YP_226530.1| metalloprotease [Corynebacterium glutamicum ATCC 13032]
 gi|26006926|sp|Q8NNB7|RRMF_CORGL RecName: Full=Probable rRNA maturation factor
 gi|21325058|dbj|BAB99680.1| Predicted metal-dependent hydrolase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326467|emb|CAF20629.1| Predicted metal-dependent hydrolase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 196

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 7/125 (5%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF-------ASSDGCS 97
           + G        E S+   D   I  L+ ++  ++ PT+V+SFP                 
Sbjct: 26  ALGEMDIHPDAEASIHIVDVDTIADLHVKWLDLEGPTDVMSFPMDELTPGYSRPDGATPG 85

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDIVL  E    +A   G +  + L  L +HG LHLLGYDHVD  +   M  L+  
Sbjct: 86  PAMLGDIVLCPEFAAKQATKAGHDLAHELALLTVHGSLHLLGYDHVDPAEEREMFALQNE 145

Query: 158 ILEDL 162
           +L D 
Sbjct: 146 LLADW 150


>gi|145296242|ref|YP_001139063.1| putative metalloprotease [Corynebacterium glutamicum R]
 gi|166227674|sp|A4QFZ5|RRMF_CORGB RecName: Full=Probable rRNA maturation factor
 gi|140846162|dbj|BAF55161.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 196

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 7/125 (5%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF-------ASSDGCS 97
           + G        E S+   D   I  L+ ++  ++ PT+V+SFP                 
Sbjct: 26  ALGEMDIHPDAEASIHIVDLDTIADLHVKWLDLEGPTDVMSFPMDELTPGYSRPDGATPG 85

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             MLGDIVL  E    +A   G +  + L  L +HG LHLLGYDHVD  +   M  L+  
Sbjct: 86  PAMLGDIVLCPEFAAKQATKAGHDLAHELALLTVHGSLHLLGYDHVDPAEEREMFALQNE 145

Query: 158 ILEDL 162
           +L D 
Sbjct: 146 LLADW 150


>gi|160915030|ref|ZP_02077243.1| hypothetical protein EUBDOL_01038 [Eubacterium dolichum DSM 3991]
 gi|158432829|gb|EDP11118.1| hypothetical protein EUBDOL_01038 [Eubacterium dolichum DSM 3991]
          Length = 155

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 3/105 (2%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIE 114
           S++F    +I  +N EYR ID+PT+V+SF     + +      S+ LGDI +  E I  +
Sbjct: 41  SVIFVTPQKIHEINREYRHIDRPTDVISFALLDEADEYEIMEDSIELGDIFINIEAIVKQ 100

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           A+  G      +  L  HG LHLLGYDH++ ++  VM  L+  IL
Sbjct: 101 ASEYGHSMRREVCFLFTHGLLHLLGYDHMEQEEERVMFALQDDIL 145


>gi|24379999|ref|NP_721954.1| putative metalloprotease [Streptococcus mutans UA159]
 gi|29428194|sp|Q8DSY7|RRMF_STRMU RecName: Full=Probable rRNA maturation factor
 gi|24377987|gb|AAN59260.1|AE014993_4 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 164

 Score =  137 bits (347), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     +EI  +TL  + FA              +   E+++ F  + R   L
Sbjct: 1   MYIEMIDETNQVSEEIKNQTLDILEFA---------AQKTGKEDKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNV----------LSFPTAFASSDGCSSLML-------GDIVLAYEIIEI 113
           N +YR  ++PT+V          LSF     + D   + +L       G++ ++ +    
Sbjct: 52  NLKYRDTNRPTDVISLEYKPESSLSFDEEDLADDPDLAEVLTEFDAYIGELFISVDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL+  G+ 
Sbjct: 112 QAQEYGHSFEREMGFLAVHGFLHINGYDHYTPQEEKEMFSLQEEILDAYGLK 163


>gi|256827192|ref|YP_003151151.1| hypothetical protein Ccur_07650 [Cryptobacterium curtum DSM 15641]
 gi|256583335|gb|ACU94469.1| conserved hypothetical protein TIGR00043 [Cryptobacterium curtum
           DSM 15641]
          Length = 157

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 21/163 (12%)

Query: 11  LDLQIAVENALWGDE-IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +D+ I  +      E + L +L + + A             K    E+S+ F D  RI  
Sbjct: 1   MDITINYDYGRERVEGMPLESLAQFIIAAE----------GKPASTEVSISFVDDDRIAE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSD----------GCSSLMLGDIVLAYEIIEIEANVLG 119
           LN  YRG   PT+VLSF       D          G     LGDIV+A ++ E +  + G
Sbjct: 51  LNEAYRGKVGPTDVLSFECDGYDDDFSVNNEADQVGEIPYELGDIVVAVDVAERQTALFG 110

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
                 +  L+ HG LHL GYDH+ +++A VME  E  +L   
Sbjct: 111 TTLAEEIELLVCHGLLHLCGYDHMVEEEAQVMEAREDELLAAW 153


>gi|154498349|ref|ZP_02036727.1| hypothetical protein BACCAP_02338 [Bacteroides capillosus ATCC
           29799]
 gi|150272660|gb|EDM99838.1| hypothetical protein BACCAP_02338 [Bacteroides capillosus ATCC
           29799]
          Length = 164

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++ ++ +E  + G E +   L +V+ A   +  ++  +       E+ ++FTD   I  +
Sbjct: 1   MNHELIIETEVEGAEPYADLLRQVIPAALEAEGVAVPW-------EVDVLFTDDEGIHQI 53

Query: 71  NFEYRGIDKPTNVLSFPT----------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N E R +D+PT+VLSFP              +  G   + LGD+V++ E  + +    G 
Sbjct: 54  NLEQREVDRPTDVLSFPMFDLQPGEHPTEEDADPGTGLVPLGDMVISLERAQAQGEEYGH 113

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKD-ACVMEGLERSILEDLGIN 165
                + +L +H  LHLLGYDH+D+      M   E +ILE LGI 
Sbjct: 114 GTRREVAYLAVHSVLHLLGYDHMDEGPMKAQMRAREEAILEQLGIT 159


>gi|290580022|ref|YP_003484414.1| hypothetical protein SmuNN2025_0496 [Streptococcus mutans NN2025]
 gi|254996921|dbj|BAH87522.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 166

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     +EI  +TL  + FA              +   E+++ F  + R   L
Sbjct: 3   MYIEMIDETNQVSEEIKNQTLDILEFA---------AQRTGKEDKEMAVTFVTNERSHEL 53

Query: 71  NFEYRGIDKPTNV----------LSFPTAFASSDGCSSLML-------GDIVLAYEIIEI 113
           N +YR  ++PT+V          LSF     + D   + +L       G++ ++ +    
Sbjct: 54  NLKYRDTNRPTDVISLEYKPESSLSFDEEDLADDPDLAEVLTEFDAYIGELFISVDKARE 113

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL+  G+ 
Sbjct: 114 QAQEYGHSFEREMGFLAVHGFLHINGYDHYTPQEEKEMFSLQEEILDAYGLK 165


>gi|294790830|ref|ZP_06755988.1| putative metalloprotease [Scardovia inopinata F0304]
 gi|294458727|gb|EFG27080.1| putative metalloprotease [Scardovia inopinata F0304]
          Length = 174

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA---FASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   +  L+  + G++ PT+V+SFP         D     +LGDI+L  ++  
Sbjct: 36  DLSIAFIDPQPMAELHVRWMGLEGPTDVMSFPMDQLRPGDEDNRPEGLLGDIILCPQVAS 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           ++A   G      ++ L IHG LHLLGYDH    +   M  L+R +L
Sbjct: 96  MQAAAAGHSTIEEMMLLTIHGVLHLLGYDHKKPDEEKRMFALQRQLL 142


>gi|282898521|ref|ZP_06306511.1| Protein of unknown function UPF0054 [Raphidiopsis brookii D9]
 gi|281196687|gb|EFA71593.1| Protein of unknown function UPF0054 [Raphidiopsis brookii D9]
          Length = 174

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           V F++ ++ L  K    +    E+ L  T+  +I+ LN +YR  D+PT+VL+F     + 
Sbjct: 36  VWFSQWLNLLAVK--LPRALSYEIGLQLTNDAQIQELNAQYRQKDQPTDVLAFAALENNF 93

Query: 94  DGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                      L LGDIV++ +    +A          L  L  HG LHLLG+DH D++ 
Sbjct: 94  PYTEEMLASQPLYLGDIVISIDTAIRQAQEREHNLTTELAWLSAHGLLHLLGWDHPDEQS 153

Query: 148 ACVMEGLERSILEDLGI 164
              M   +  +L+ +GI
Sbjct: 154 LIEMLNKQSMLLKLVGI 170


>gi|150015729|ref|YP_001307983.1| metalloprotease [Clostridium beijerinckii NCIMB 8052]
 gi|189040615|sp|A6LRP7|RRMF_CLOB8 RecName: Full=Probable rRNA maturation factor
 gi|149902194|gb|ABR33027.1| protein of unknown function UPF0054 [Clostridium beijerinckii NCIMB
           8052]
          Length = 167

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 24/164 (14%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           +N +   E  +  L EV     +   + +     +   E+SL+F D++ I+ +N E RGI
Sbjct: 8   QNKVEASEKLIERLTEV-----IEFALKEEEVNMK--CEISLLFVDNNEIKEINNETRGI 60

Query: 78  DKPTNVLSFPTAFASSD-----------------GCSSLMLGDIVLAYEIIEIEANVLGK 120
           ++ T+VLSFP                            L+LGDIVL+ E    ++     
Sbjct: 61  NRETDVLSFPMLEYEDKKVFKDMYKDYKFSQSDFDGDELVLGDIVLSLEKALEQSKEFNH 120

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +E    +L++H  LHLLGYDH++D D  +M   E  IL  L I
Sbjct: 121 SYEREASYLVVHSVLHLLGYDHMEDDDKIIMRSREEDILNKLNI 164


>gi|320547279|ref|ZP_08041571.1| metalloprotease [Streptococcus equinus ATCC 9812]
 gi|320448083|gb|EFW88834.1| metalloprotease [Streptococcus equinus ATCC 9812]
          Length = 165

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     +EI  +TL  + FA                  E+++ F  + R   L
Sbjct: 1   MYVEMIDETGQVPEEIKNQTLDLLQFA---------AEKTGNENKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNV----------LSFPTAFASSDGCSSLML-------GDIVLAYEIIEI 113
           N EYR  D+PT+V          LSF     + +   + ML       G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPESDLSFSEEDLAENPELAEMLDEFDAYIGELFISVDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 112 QAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLK 163


>gi|260892062|ref|YP_003238159.1| protein of unknown function UPF0054 [Ammonifex degensii KC4]
 gi|260864203|gb|ACX51309.1| protein of unknown function UPF0054 [Ammonifex degensii KC4]
          Length = 149

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 3/120 (2%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM 100
           +  ++         VE+ +   D   I  LN  YRG D PTNVL+FP           L+
Sbjct: 25  AAELALDLLGPRREVEVGVTLLDDTGIRELNRRYRGKDAPTNVLAFPMGEEEP---PVLL 81

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGD+V++ E    EA   GK  E  L HL++HG LHLLGYDH  D +  +M   E ++L 
Sbjct: 82  LGDVVISVETARSEAEEEGKGIEEKLAHLVVHGVLHLLGYDHETDAEEALMREKEEAVLA 141


>gi|322411294|gb|EFY02202.1| putative metalloprotease [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 165

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E      EI  +T+  + FA              +   E+S+ F  + R   L
Sbjct: 1   MYIEMIDETGQVSQEIMEQTIDLLNFA---------AQKTGKEEKEMSVTFVTNARSHEL 51

Query: 71  NFEYRGIDKPTNVLS----------FPTAFASSDGCSSLM-------LGDIVLAYEIIEI 113
           N EYR  D+PT+V+S          F     ++D   + M       +G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPETPILFSQDDLAADPSLAEMMAEFDAYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 112 QAQDYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 163


>gi|171780164|ref|ZP_02921068.1| hypothetical protein STRINF_01952 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281512|gb|EDT46947.1| hypothetical protein STRINF_01952 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 165

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     +EI  +TL  + FA              +   E+++ F  + R   L
Sbjct: 1   MYVEMIDETGQVSEEIKNQTLDLLQFA---------AEKTGKENKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLS----------FPTAFASSDGCSSLML-------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S          F     + +   + ML       G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPESDLTFSEEDLAENPELAEMLDEFDAYIGELFISVDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L++HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 112 QAKEYGHSFEREMGFLVVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLK 163


>gi|145558833|sp|Q0KE95|RRMF_CUPNH RecName: Full=Probable rRNA maturation factor
          Length = 198

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 12/159 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L++ ++N        +     +   + +   +    +       L++ F D     TLN 
Sbjct: 49  LELEIQNGD-----GVGKRAGLPPRRKIETWVKSALYADAA---LTIRFVDEEEGRTLNR 100

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            YRG D  TNVL+F  A    D  +    GDIVL   ++E EA    K  E H  HLI+H
Sbjct: 101 TYRGKDYATNVLTFAYAENEEDPVT----GDIVLCCPVVETEAREQRKPLEAHYAHLIVH 156

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           G LH  GY+H +D +A  ME +E   L+ LG  DPY+ D
Sbjct: 157 GVLHAQGYEHEEDAEAEEMEAIETETLQALGYADPYQGD 195


>gi|118594512|ref|ZP_01551859.1| hypothetical protein MB2181_02550 [Methylophilales bacterium
           HTCC2181]
 gi|118440290|gb|EAV46917.1| hypothetical protein MB2181_02550 [Methylophilales bacterium
           HTCC2181]
          Length = 153

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 7/119 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
            K+  + L++        + LN  YR ++K TNVLSF             ++GD+VL + 
Sbjct: 33  FKDCNLTLTIRLVGESESKNLNNSYRNLNKATNVLSFQIE-------DKPIIGDLVLCHA 85

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           I++ EA +  K+  +H  HL+IHG LHL+G DH ++ DA  ME  E  +LE LGI +PY
Sbjct: 86  IVKKEARIQRKKIHDHYAHLLIHGCLHLMGLDHENEDDADAMEKKEILLLEKLGIKNPY 144


>gi|152967330|ref|YP_001363114.1| metalloprotease [Kineococcus radiotolerans SRS30216]
 gi|189040137|sp|A6WDG1|RRMF_KINRD RecName: Full=Probable rRNA maturation factor
 gi|151361847|gb|ABS04850.1| protein of unknown function UPF0054 [Kineococcus radiotolerans
           SRS30216]
          Length = 173

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 9/123 (7%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYE 109
           + ELS++  D   +  L+ ++     PT+V+SFP                +LGD+V+  +
Sbjct: 38  LAELSVLMVDVEAMARLHVQWMDEPGPTDVMSFPMDQLRPGREGRTSEPGLLGDVVVCPQ 97

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI----LEDLGIN 165
           +   +A   G    + ++ L+ HG LHLLGYDH +  +   M  L+R +    L  +G  
Sbjct: 98  VAAEQAKASGHATADEVLLLVAHGILHLLGYDHAEPDEEREMFTLQRRLVLGFLARIGRP 157

Query: 166 -DP 167
            DP
Sbjct: 158 GDP 160


>gi|320353408|ref|YP_004194747.1| pyridoxine 5'-phosphate synthase [Desulfobulbus propionicus DSM
           2032]
 gi|320121910|gb|ADW17456.1| pyridoxine 5'-phosphate synthase [Desulfobulbus propionicus DSM
           2032]
          Length = 392

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 2/118 (1%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIV 105
              +K    ++S+VF     +   N +YR  + PTNVLSFP A       +    LGDI+
Sbjct: 29  ARLLKLEGADVSVVFLGDAEMAAYNEQYRRKNGPTNVLSFPAAEGGEGFVAPENELGDIL 88

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDL 162
           ++ +    EA   G    + L  LIIHG LHL+GYDH   +++A  M   E+ + + L
Sbjct: 89  ISVDTARREAGQQGHSLHHRLTQLIIHGMLHLIGYDHERSEEEAVRMWDYEQELFQQL 146


>gi|325068590|ref|ZP_08127263.1| hypothetical protein AoriK_12246 [Actinomyces oris K20]
 gi|326773546|ref|ZP_08232829.1| metalloprotease [Actinomyces viscosus C505]
 gi|326636776|gb|EGE37679.1| metalloprotease [Actinomyces viscosus C505]
          Length = 152

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +  ++  E     D      L + V                    EL+++F D   +E L
Sbjct: 1   MTTEVINETTTVIDAAEFAALADHVLTAM----------HVSPAAELNIMFIDPEPMEEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM----LGDIVLAYEIIEIEANVLGKEFENHL 126
           +  +  +  PT+V+SFP          S      LGDIVL  ++   +A   G      +
Sbjct: 51  HVRWLDLPGPTDVMSFPMDELRPGSADSPTPAGTLGDIVLCPQVAAKQALAAGHSAVEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L +HG LHLLGYDH + ++   M  L+R +L
Sbjct: 111 LLLTVHGILHLLGYDHAEPEEKKEMFDLQRRLL 143


>gi|302381346|ref|YP_003817169.1| hypothetical protein Bresu_0231 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191974|gb|ADK99545.1| protein of unknown function UPF0054 [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 153

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/156 (39%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           +++ VE   W D I                  +    + E    + ++ TD   +  LN 
Sbjct: 2   IEVEVEADDWTDAID---------DVEAVVERAAVAALGEQAGGVVVLLTDDATVRDLNA 52

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            +RG D+PTNVLSFP A    D      LGDIVLAY +   EA   GK    HL HL++H
Sbjct: 53  RFRGKDRPTNVLSFPAADM-PDTGGPRPLGDIVLAYGVCAGEATAQGKTLTGHLTHLVVH 111

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LHLLG DH D+ +A  ME  ER+IL  LG+ DPY
Sbjct: 112 GVLHLLGRDHEDEAEAETMEAEERTILARLGVADPY 147


>gi|331270001|ref|YP_004396493.1| hypothetical protein CbC4_1822 [Clostridium botulinum BKT015925]
 gi|329126551|gb|AEB76496.1| protein of unknown function UPF0054 [Clostridium botulinum
           BKT015925]
          Length = 166

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/164 (34%), Positives = 81/164 (49%), Gaps = 24/164 (14%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           ++ +  DE  L T+ E++      N   K   VK N  E+S++F D+  I+ +N E R I
Sbjct: 8   QDKIKIDEKILETVKEII------NYTLKEEEVKVN-TEVSVIFIDNSTIKEINKETRDI 60

Query: 78  DKPTNVLSFPT-----------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           DK T+VLSFP                    AS      L+LGDIVL+ E  E ++   G 
Sbjct: 61  DKVTDVLSFPMLDYLQGKIYKETYKDYEFDASYLDEGELVLGDIVLSLERAEEQSKDFGH 120

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            F   + +L +H  LHLLGYDH++++D   M   E  ILE   I
Sbjct: 121 SFLREVCYLTVHSVLHLLGYDHMEEEDKVRMRKREEEILEKFSI 164


>gi|331698255|ref|YP_004334494.1| metalloprotease ybeY [Pseudonocardia dioxanivorans CB1190]
 gi|326952944|gb|AEA26641.1| metalloprotease ybeY [Pseudonocardia dioxanivorans CB1190]
          Length = 178

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 17/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ +  DE  + ++                       VEL++    +  +  L
Sbjct: 1   MSIEVANESGIAVDESLIVSVARFALDAM----------GVSPAVELAITAVTTEAMSEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +  +     PT+V++FP            +      +LGD+VL       +A   G    
Sbjct: 51  HERWMDEPGPTDVMAFPMDELAEETRRPDAPDIGPALLGDVVLCPAFARDQARKAGHGLP 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L  L +HG LHLLGYDH + +    M  L+  +L + 
Sbjct: 111 DELHLLTVHGVLHLLGYDHAEPEQEREMFSLQDRLLAEW 149


>gi|309775531|ref|ZP_07670531.1| metalloprotease [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916625|gb|EFP62365.1| metalloprotease [Erysipelotrichaceae bacterium 3_1_53]
          Length = 155

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIE 114
           S++F     I  +N EYR ID+PT+V+SF    +            LGDI +  E +  +
Sbjct: 41  SVIFVTKDAIHEINREYRKIDRPTDVISFALKDSEDSYEVMEGGEELGDIFINTEAVVSQ 100

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           A   G      +  L  HG LHLLGYDH+  ++  VM  L+  IL+D+
Sbjct: 101 AADYGHTLRREVCFLFTHGLLHLLGYDHMTPEEEAVMFQLQDVILDDI 148


>gi|302335756|ref|YP_003800963.1| protein of unknown function UPF0054 [Olsenella uli DSM 7084]
 gi|301319596|gb|ADK68083.1| protein of unknown function UPF0054 [Olsenella uli DSM 7084]
          Length = 168

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-- 96
           A+ +L+ +   V      +S+      R+  LN  +R  D+ T+VLS             
Sbjct: 25  AICDLVLEQEGVGRPCA-VSVSIVSDERMRELNRTWRDQDRATDVLSLECERPGDPDLAP 83

Query: 97  -SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                LGDIVLA   I  +A  L     +    L++HG LHLLGYDH+DD +A VME  E
Sbjct: 84  GEPCELGDIVLAPSYIRRQAQRLSTTEADECRLLLVHGMLHLLGYDHLDDAEAEVMEARE 143

Query: 156 RSILE 160
            ++L+
Sbjct: 144 DALLD 148


>gi|330718563|ref|ZP_08313163.1| metal-dependent hydrolase [Leuconostoc fallax KCTC 3537]
          Length = 160

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 11/129 (8%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----------GCS 97
           Y       E+S+ F ++  I   N +YRG+DKPT+V+SF       D             
Sbjct: 31  YLKLPEDTEMSVTFMNNDAIHEYNKQYRGVDKPTDVISFAIEEDGDDLPVLPDEEMAETL 90

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLER 156
           +  +GDI+++ +I++ +A+ LG  FE  L  L++HGFLHL GYDH+D+      M  L+R
Sbjct: 91  AKNIGDILVSIDIVDTQADYLGHSFERELGFLVVHGFLHLNGYDHMDEGPQEKEMFELQR 150

Query: 157 SILEDLGIN 165
            IL+D G+ 
Sbjct: 151 KILDDYGLE 159


>gi|269218582|ref|ZP_06162436.1| putative metalloprotease [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211693|gb|EEZ78033.1| putative metalloprotease [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 164

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 16/155 (10%)

Query: 11  LDLQIAVENALWG--DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           + + +  E+      D   +  L   V  +   +             EL+++F D   + 
Sbjct: 1   MSIDVNDESGFAPGIDLKEVSDLARFVLDRMRVH----------PAAELNVLFEDEESMA 50

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM----LGDIVLAYEIIEIEANVLGKEFEN 124
            L+ E+  +D PT+VLSFP                 LGDIV+  ++   +A   G     
Sbjct: 51  RLHVEWMDLDGPTDVLSFPMDELRPAPIGEEPREGVLGDIVVCPQVAARQAYTAGHAVAE 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            ++ L+ HG LHLLGYDH ++ +   M  L+R +L
Sbjct: 111 EVLLLVTHGILHLLGYDHAEEDERREMFDLQRQLL 145


>gi|154509439|ref|ZP_02045081.1| hypothetical protein ACTODO_01970 [Actinomyces odontolyticus ATCC
           17982]
 gi|293189526|ref|ZP_06608246.1| putative metalloprotease [Actinomyces odontolyticus F0309]
 gi|153799073|gb|EDN81493.1| hypothetical protein ACTODO_01970 [Actinomyces odontolyticus ATCC
           17982]
 gi|292821616|gb|EFF80555.1| putative metalloprotease [Actinomyces odontolyticus F0309]
          Length = 149

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 14/150 (9%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++  E     +E     L + V  +              +  E++++F +   +E L+  
Sbjct: 3   EVINETDYEINEAEFSALADYVLDQM----------HVSSDAEVNIIFIEPEPMEDLHVR 52

Query: 74  YRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +  +  PT+V+SFP        +       MLGDI +  ++   +A   G      ++ L
Sbjct: 53  WLDLPGPTDVMSFPMDELRPGTADHPTPPGMLGDICICPQVAARQAAESGHSAAEEMLLL 112

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             HG LHLLGYDH  D +  VM  L+R +L
Sbjct: 113 ATHGMLHLLGYDHATDAEREVMFALQRKLL 142


>gi|313682547|ref|YP_004060285.1| hypothetical protein Sulku_1423 [Sulfuricurvum kujiense DSM 16994]
 gi|313155407|gb|ADR34085.1| protein of unknown function UPF0054 [Sulfuricurvum kujiense DSM
           16994]
          Length = 187

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 15/157 (9%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVK--ENIV------ELSLVFTDSHRIE 68
           +E+ ++G  I ++ +C       + N   K Y  +  E I       E+ L+ TD+  I 
Sbjct: 28  IESPIFGTFISIQNICYNTAMIELDNRTDKTYNFQLLEQIADLLSDREIELILTDNVEIA 87

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            +N E+RGIDK T+VLSFP+     D      LG IV++ + +   AN L    ++ +  
Sbjct: 88  EINREFRGIDKATDVLSFPS-----DPFPGAPLGSIVISVDKVASVANELKHSEDHEIAL 142

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           L IHG LHLLG+DH  + D   M   E  ++E   + 
Sbjct: 143 LFIHGMLHLLGFDH--EVDNGEMRQKEIELIETFKLP 177


>gi|254819388|ref|ZP_05224389.1| putative metalloprotease [Mycobacterium intracellulare ATCC 13950]
          Length = 177

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ +   E  L ++   V AK   N             ELS+V  D+  +  L
Sbjct: 1   MSIEVSNESGIDVSEAELISVARHVIAKMDVN----------PAAELSMVLLDTAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  E    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAGQAAAAGHSLGH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L IHG LHL+GYDH +  +   M  L+  +LE+ 
Sbjct: 111 ELALLTIHGVLHLIGYDHGEPDEEKEMFALQDRLLEEW 148


>gi|294101753|ref|YP_003553611.1| protein of unknown function UPF0054 [Aminobacterium colombiense DSM
           12261]
 gi|293616733|gb|ADE56887.1| protein of unknown function UPF0054 [Aminobacterium colombiense DSM
           12261]
          Length = 178

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 16  AVENALWGDEIHLRTL--CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +V++        LR L  CE V  + V  L    Y  +    E+S+    +  ++ +N E
Sbjct: 9   SVDDGESESIRALRKLEGCEEVLERVVQRLFQGRY--ENQQAEVSISIVSTTEMQEINRE 66

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSS-----LMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           YRGID+PT+VLSFP      + C       L LGDI++  E++   A      +   L  
Sbjct: 67  YRGIDQPTDVLSFPMWEEGEEFCPPSGWEMLPLGDILICEEVVRENARQNNVSYIEELYL 126

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           ++ HGFLHLLG DH   +   +M  L+  I ++ 
Sbjct: 127 IVAHGFLHLLGIDHDTVEKQEMMWSLQSIIRDEW 160


>gi|125571963|gb|EAZ13478.1| hypothetical protein OsJ_03394 [Oryza sativa Japonica Group]
          Length = 425

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 5/139 (3%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +I L  L +  +    +++   G + K   VE+S++  + + I+ LN E+RG D    +L
Sbjct: 4   KIALDGLLDSNYKTRDTSISDVGRYDK---VEVSVLLCNDNFIQNLNKEWRGEDSCIEML 60

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           S        D    LMLGDIV++ E    +A   G    + +  L + G L LLG+DH  
Sbjct: 61  SMSQYIPDLD-VPILMLGDIVISVETAARQAEERGHTLLDEVRILAVRGILRLLGFDHQT 119

Query: 145 DKD-ACVMEGLERSILEDL 162
             + A  ME  E+ IL+ L
Sbjct: 120 SHESAVEMEKEEQLILKSL 138


>gi|323126736|gb|ADX24033.1| putative metalloprotease [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 165

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E      EI  +T+  + FA              +   E+S+ F  + R   L
Sbjct: 1   MYIEMIDETGQVSQEIMEQTIDLLNFA---------AQKTGKEEKEMSVTFVTNARSHEL 51

Query: 71  NFEYRGIDKPTNVLS----------FPTAFASSDGCSSLM-------LGDIVLAYEIIEI 113
           N EYR  D+PT+V+S          F     ++D   + M       +G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPETPILFSQDDLAADPSLAEMMAEFDAYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 112 QAEDYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 163


>gi|227874777|ref|ZP_03992930.1| metalloprotease [Mobiluncus mulieris ATCC 35243]
 gi|269976805|ref|ZP_06183780.1| putative metalloprotease [Mobiluncus mulieris 28-1]
 gi|306818070|ref|ZP_07451801.1| probable metalloprotease [Mobiluncus mulieris ATCC 35239]
 gi|227844552|gb|EEJ54708.1| metalloprotease [Mobiluncus mulieris ATCC 35243]
 gi|269935002|gb|EEZ91561.1| putative metalloprotease [Mobiluncus mulieris 28-1]
 gi|304649034|gb|EFM46328.1| probable metalloprotease [Mobiluncus mulieris ATCC 35239]
          Length = 150

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 6/137 (4%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            L    F   +S  + + Y       E++L+  D   +  L+  +  +  PT+VLSFP  
Sbjct: 12  DLDATEFVALISFCLEQLYVSPA--AEVNLMMVDMATMTDLHIRWMDLPGPTDVLSFPMD 69

Query: 90  FASSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             +           MLGDIVL  ++   +A   G      ++ L +HG LHLLG+DHV +
Sbjct: 70  ELTPGQEGQPSAGGMLGDIVLCPDVAAEQARDAGHSAVEEMLLLTVHGLLHLLGFDHVTE 129

Query: 146 KDACVMEGLERSILEDL 162
           ++   M  L+R +L   
Sbjct: 130 EEEKTMFTLQRRLLLSF 146


>gi|288817391|ref|YP_003431738.1| putative metalloprotease [Hydrogenobacter thermophilus TK-6]
 gi|288786790|dbj|BAI68537.1| putative metalloprotease [Hydrogenobacter thermophilus TK-6]
          Length = 147

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 5/139 (3%)

Query: 26  IHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           I +R     +    +  +  +    +     E+S+  TD   I  LN +YRG D+PT+VL
Sbjct: 12  IQIRLHKRSIKKAQIEQISERIAELLGLERAEISIYITDDETIRHLNRDYRGKDEPTDVL 71

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV- 143
           SFP         + L+LGDIV++++  + +A+ +G   E  +  L+ HGF+HLLGYDH  
Sbjct: 72  SFPICEKVG---NWLILGDIVISFDTAKKQASQMGHSLEEEIKRLLAHGFVHLLGYDHEL 128

Query: 144 DDKDACVMEGLERSILEDL 162
             ++      LE  +L++L
Sbjct: 129 GGEEERKFFELESYVLKNL 147


>gi|255292981|dbj|BAH90078.1| hypothetical protein [uncultured bacterium]
 gi|255293017|dbj|BAH90113.1| hypothetical protein [uncultured bacterium]
          Length = 152

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 14/156 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + I  E+ +  DE  L +L   V  +               + ELS+V  D   +   
Sbjct: 1   MTVDINNESGVEVDETGLVSLATFVLDQ----------LRIHPMAELSVVLVDEATMSAY 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + +Y     PT+VLSFP       +  +   + +LGD+VL   I   +A   G+E +   
Sbjct: 51  HEKYMNEPGPTDVLSFPMDELRPPSDDEEPPAGLLGDVVLCPTITSAQAAEHGREPDEEA 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +L++HG LHL+G+DH   ++   M GL+  +L   
Sbjct: 111 EYLLVHGILHLVGFDHGTPEEKAEMFGLKDRLLAAW 146


>gi|254419922|ref|ZP_05033646.1| conserved hypothetical protein TIGR00043, putative [Brevundimonas
           sp. BAL3]
 gi|196186099|gb|EDX81075.1| conserved hypothetical protein TIGR00043, putative [Brevundimonas
           sp. BAL3]
          Length = 154

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/159 (38%), Positives = 83/159 (52%), Gaps = 14/159 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I VE   W          E V  KA    +           ++ ++ TD   +  LN 
Sbjct: 2   IEIEVEAEAW---TGALPETEAVVTKAAEAALGAVAG------DVVVLLTDDEAVRELNA 52

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            +R  D+PTNVLSFP   ++     +  LGDIVLAY +   EA   GK   +HL HL++H
Sbjct: 53  RFRDKDRPTNVLSFPAPESA-----APHLGDIVLAYGVCASEAQAQGKTLSDHLSHLVVH 107

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           G LHLLG DH DD +A  ME  ER IL +LG++DPY  D
Sbjct: 108 GVLHLLGRDHEDDAEAEEMEAEEREILAELGVSDPYAAD 146


>gi|223985695|ref|ZP_03635742.1| hypothetical protein HOLDEFILI_03048 [Holdemania filiformis DSM
           12042]
 gi|223962306|gb|EEF66771.1| hypothetical protein HOLDEFILI_03048 [Holdemania filiformis DSM
           12042]
          Length = 162

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 6/131 (4%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD- 94
           F +   + +      K+    +S++F  S +I  +N +YR +D+PT+V+SF       + 
Sbjct: 30  FQRIAEHAL--EVLNKQGDYTISVIFVKSRKIHEINRDYRQVDRPTDVISFAACDDQDEF 87

Query: 95  ---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                + + LGDI +  E    +A   G   +  +  L  HG LH  GYDH+   +  +M
Sbjct: 88  ELIEEAEVELGDIFINVEAAISQAEEYGHSLQREICFLFTHGLLHCFGYDHMQPDEEKIM 147

Query: 152 EGLERSILEDL 162
             L+  IL+ L
Sbjct: 148 FDLQHEILDPL 158


>gi|116511926|ref|YP_809142.1| putative metalloprotease [Lactococcus lactis subsp. cremoris SK11]
 gi|123125607|sp|Q02ZA2|RRMF_LACLS RecName: Full=Probable rRNA maturation factor
 gi|116107580|gb|ABJ72720.1| Predicted metal-dependent hydrolase [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 162

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 22/169 (13%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E      EI  +T   + FA    +L        +   E+S+ F D+ R   L
Sbjct: 1   MYVELVDETGQVPSEIIEQTKEVLAFAAKKLDL--------KESTEMSVTFVDNARSHEL 52

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSS--------------LMLGDIVLAYEIIEIEAN 116
           N +YR  D+PT+V+S       S+                    +G++ ++ +    +A 
Sbjct: 53  NLQYRETDRPTDVISLEYKPDESEFFFDEDMELPEELLEEMDPFIGELFISIDKAAEQAA 112

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G   E     L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 113 DYGHSIEREYGWLAVHGFLHINGYDHYMPEEESEMFALQEEILTAYGLT 161


>gi|298346301|ref|YP_003718988.1| metalloprotease [Mobiluncus curtisii ATCC 43063]
 gi|304389934|ref|ZP_07371891.1| probable metalloprotease [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315654890|ref|ZP_07907795.1| metalloprotease [Mobiluncus curtisii ATCC 51333]
 gi|315657186|ref|ZP_07910070.1| metalloprotease [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|298236362|gb|ADI67494.1| metalloprotease [Mobiluncus curtisii ATCC 43063]
 gi|304326827|gb|EFL94068.1| probable metalloprotease [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315490851|gb|EFU80471.1| metalloprotease [Mobiluncus curtisii ATCC 51333]
 gi|315492289|gb|EFU81896.1| metalloprotease [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 150

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLAYEI 110
            E++++F D   +  L+ ++  +  PT+VLSFP    +        ++ +LGDIVL  ++
Sbjct: 35  AEVNIMFVDIKTMTDLHVKWMDLPGPTDVLSFPMDELTPGREGVPSAAGVLGDIVLCPDV 94

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +A   G      ++ L +HG LHLLG+DH + ++   M  L+R +L
Sbjct: 95  AAEQARDAGHAPIEEMLLLTVHGLLHLLGFDHAEPEEEKTMFTLQRKLL 143


>gi|295110094|emb|CBL24047.1| conserved hypothetical protein TIGR00043 [Ruminococcus obeum
           A2-162]
          Length = 164

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 22/170 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +QI      +  E  L    E + +K  ++++   +      V ++LV TD+  I+ +
Sbjct: 1   MTIQI-----DYEAERKLDIDYEKLASKVAAHILETEH--CPYDVCVNLVITDNEEIKRV 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD---------------GCSSLMLGDIVLAYEIIEIEA 115
           N E+R I  PT+VLSFP     +                    L+LGD++++ + +  +A
Sbjct: 54  NTEFRSIGAPTDVLSFPMIPFETPADYSVIEGDDSYFDLDTEELILGDVMISVDKVYAQA 113

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G   E     L  H  LHLLGYDH++  +A VME  +   LEDLGI 
Sbjct: 114 EEYGHSTEREFSFLFAHSMLHLLGYDHMEPDEAAVMEAKQAKALEDLGIT 163


>gi|312113952|ref|YP_004011548.1| hypothetical protein Rvan_1179 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219081|gb|ADP70449.1| protein of unknown function UPF0054 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 193

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 8/165 (4%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           R+   I++E+  W     L  L      K V+  + +     E+   +S+      ++ +
Sbjct: 26  RIGTDISIEDDRWVSVDGLEDL----IPKLVAETLREAGLTPEDAC-VSVALMSGEQVRS 80

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN  +R  D  TNVLSFP+  A+           LGD+ L+Y+ +  EA    K    H 
Sbjct: 81  LNKVFRSKDADTNVLSFPSPEAARSAVLEDEPAFLGDVALSYDAVVGEAQAQAKTPLQHT 140

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            HL+ HG LHL+G+DH  D DA  ME  ER IL   GI DPY  D
Sbjct: 141 AHLVAHGVLHLVGFDHEADADADAMEAAERVILARFGIPDPYRDD 185


>gi|302874331|ref|YP_003842964.1| hypothetical protein Clocel_1447 [Clostridium cellulovorans 743B]
 gi|307689402|ref|ZP_07631848.1| putative metalloprotease [Clostridium cellulovorans 743B]
 gi|302577188|gb|ADL51200.1| protein of unknown function UPF0054 [Clostridium cellulovorans
           743B]
          Length = 166

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 19/158 (12%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
            E+ +         K +   + +         E+S+++ D+  I  +N + R IDK T+V
Sbjct: 9   SEVEVDDDFNGTIRKVIDYALKEEGVNIP--YEISIIYVDNETIRNINSDTRKIDKVTDV 66

Query: 84  LSFPTAFAS-----------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LSFP                            L+LGDIVL+ E  + ++   G  +    
Sbjct: 67  LSFPMLDYPKGQVYKNTYEDQSFHVVDLDDGYLVLGDIVLSLEKAKEQSEEYGHSYLRET 126

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            +L+IH  LHLLGYDH+++++  +M   E +IL +  I
Sbjct: 127 CYLVIHSVLHLLGYDHMEEEEKGIMRKREETILSEFSI 164


>gi|169628759|ref|YP_001702408.1| putative metalloprotease [Mycobacterium abscessus ATCC 19977]
 gi|238688929|sp|B1MN42|RRMF_MYCA9 RecName: Full=Probable rRNA maturation factor
 gi|169240726|emb|CAM61754.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 170

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +   E  L ++     A    +             ELS++  D   +  L
Sbjct: 1   MSIEVVNESGIDVAEGELVSVARFAIAAMDVH----------PAAELSMMLVDLAAMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +  +  +  PT+V+SFP       G          MLGDIVL  +    +A   G    +
Sbjct: 51  HMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPQFAAEQAEAAGHSLAH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH + ++   M  L+  +L+D 
Sbjct: 111 ELALLTVHGVLHLLGYDHAEPEEEREMFALQNQLLQDW 148


>gi|308750998|gb|ADO44481.1| protein of unknown function UPF0054 [Hydrogenobacter thermophilus
           TK-6]
          Length = 144

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 5/139 (3%)

Query: 26  IHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           I +R     +    +  +  +    +     E+S+  TD   I  LN +YRG D+PT+VL
Sbjct: 9   IQIRLHKRSIKKAQIEQISERIAELLGLERAEISIYITDDETIRHLNRDYRGKDEPTDVL 68

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV- 143
           SFP         + L+LGDIV++++  + +A+ +G   E  +  L+ HGF+HLLGYDH  
Sbjct: 69  SFPICEKVG---NWLILGDIVISFDTAKKQASQMGHSLEEEIKRLLAHGFVHLLGYDHEL 125

Query: 144 DDKDACVMEGLERSILEDL 162
             ++      LE  +L++L
Sbjct: 126 GGEEERKFFELESYVLKNL 144


>gi|324998268|ref|ZP_08119380.1| metal-binding heat shock protein [Pseudonocardia sp. P1]
          Length = 181

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 17/156 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +  DE  + ++          N             EL++       +E L
Sbjct: 1   MSIEVVNESGIAIDEAQIVSVARYALDAMKVN----------PAAELAITAVALDAMEEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDG-------CSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +  +     PT+V++FP    + DG           +LGD+VL       +A   G    
Sbjct: 51  HVRWMDEPGPTDVMAFPMDSLADDGRRPDAPDLGPALLGDVVLCPAFARDQARKAGHTLA 110

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  L +HG LHLLGYDH++  D   M  L+  +L
Sbjct: 111 DELHLLTVHGILHLLGYDHLEPDDEREMFALQNRLL 146


>gi|320532466|ref|ZP_08033292.1| conserved hypothetical protein TIGR00043 [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|329946932|ref|ZP_08294344.1| translation metalloprotein YbeY [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|320135319|gb|EFW27441.1| conserved hypothetical protein TIGR00043 [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|328526743|gb|EGF53756.1| translation metalloprotein YbeY [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 152

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +  ++  E     D      L + V                    EL+++F D   +E L
Sbjct: 1   MTTEVINETTTVIDAAEFADLADHVLTAM----------HVSPAAELNIMFIDPEPMEEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  +  +  PT+V+SFP       ++     +  LGDIVL  ++   +A   G      +
Sbjct: 51  HVRWLDLPGPTDVMSFPMDELRPGSADSPTPAGTLGDIVLCPQVAAKQALAAGHSAVEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L +HG LHLLGYDH + ++   M  L+R +L
Sbjct: 111 LLLTVHGILHLLGYDHAEPEEKKEMFDLQRRLL 143


>gi|307700639|ref|ZP_07637667.1| translation metalloprotein YbeY [Mobiluncus mulieris FB024-16]
 gi|307614169|gb|EFN93410.1| translation metalloprotein YbeY [Mobiluncus mulieris FB024-16]
          Length = 148

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 6/137 (4%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            L    F   +S  + + Y       E++L+  D   +  L+  +  +  PT+VLSFP  
Sbjct: 10  DLDATEFVALISFCLEQLYVSPA--AEVNLMMVDMATMTDLHIRWMDLPGPTDVLSFPMD 67

Query: 90  FASSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
             +           MLGDIVL  ++   +A   G      ++ L +HG LHLLG+DHV +
Sbjct: 68  ELTPGQEGQPSAGGMLGDIVLCPDVAAEQARDAGHSAVEEMLLLTVHGLLHLLGFDHVTE 127

Query: 146 KDACVMEGLERSILEDL 162
           ++   M  L+R +L   
Sbjct: 128 EEEKTMFTLQRRLLLSF 144


>gi|189425788|ref|YP_001952965.1| hypothetical protein Glov_2732 [Geobacter lovleyi SZ]
 gi|189422047|gb|ACD96445.1| protein of unknown function UPF0054 [Geobacter lovleyi SZ]
          Length = 128

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 2/113 (1%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
            +  ELS+       I  LN EY G D+PTNV+SF          +   LGD+V++ +  
Sbjct: 4   PDETELSVTVVGDRAIHRLNREYLGKDRPTNVISFSLQEGEFGDLTPHALGDVVISADTA 63

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSILEDL 162
             EA   G      L+ L++HG LHL GYDH    + +A  ME  ER I + L
Sbjct: 64  ADEAQSCGWGGYERLIFLLLHGILHLTGYDHERSGEAEARRMERKEREIWKLL 116


>gi|166366707|ref|YP_001658980.1| putative metalloprotease [Microcystis aeruginosa NIES-843]
 gi|166089080|dbj|BAG03788.1| putative metalloprotease [Microcystis aeruginosa NIES-843]
          Length = 170

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 8/135 (5%)

Query: 39  AVSNLIS--KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-- 94
            +   +     Y       ELSL  TD   I+T N +YR  D+PT+VL+F T        
Sbjct: 33  WLETWLGYLSDYLPVAAGYELSLRLTDDREIQTYNCQYRHKDQPTDVLAFATLEVDFPVD 92

Query: 95  ----GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                   L LGDI+++ E  + +A          L  L  H  LHLLG+DH D+     
Sbjct: 93  ERILETEPLYLGDIIISVETAQQQALTQNHSLARELAWLTAHACLHLLGWDHPDETSLLE 152

Query: 151 MEGLERSILEDLGIN 165
           M  L+ ++L+ + + 
Sbjct: 153 MLSLQETLLKTVEMP 167


>gi|2749950|gb|AAC38046.1| unknown [Streptococcus mutans]
          Length = 164

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     + I  +TL  + FA              +   E+++ F  + R   L
Sbjct: 1   MYIEMIDETNQVSEGIKNQTLDILEFA---------AQKTGKEDKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNV----------LSFPTAFASSDGCSSLML-------GDIVLAYEIIEI 113
           N +YR  ++PT+V          LSF     + D   + +L       G++ ++ +    
Sbjct: 52  NLKYRDTNRPTDVISLEYKPESSLSFDEEDLADDPDLAEVLTEFDAYIGELFISVDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL+  G+ 
Sbjct: 112 QAQEYGHSFEREMGFLAVHGFLHINGYDHYTPQEEKEMFSLQEEILDAYGLK 163


>gi|158313947|ref|YP_001506455.1| putative metalloprotease [Frankia sp. EAN1pec]
 gi|238686840|sp|A8KYW3|RRMF_FRASN RecName: Full=Probable rRNA maturation factor
 gi|158109352|gb|ABW11549.1| protein of unknown function UPF0054 [Frankia sp. EAN1pec]
          Length = 159

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 18/156 (11%)

Query: 15  IAVENALWG-DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +A E+ +   DE+ L  L   V      N           + ELS++  +   +  L+  
Sbjct: 5   VANESGVTDFDEVTLAALARFVLDTMKVN----------PLAELSVMLVEIDAMTDLHVR 54

Query: 74  YRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           Y   + PT+VL+FP           S +   + +LGD+VL  E+   +A   G   E  L
Sbjct: 55  YMAEEGPTDVLAFPQDEAFEPSWSESPEEDPTTLLGDVVLCPEVARRQAAQAGHGMEREL 114

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L  HG LHLLGYDH + ++   M  L+ S+L   
Sbjct: 115 HILCTHGILHLLGYDHAEPEEEREMWKLQNSLLASW 150


>gi|159026769|emb|CAO89056.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 170

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD------GCSSLML 101
           Y       ELSL  TD   I+T N +YR  D+PT+VL+F                  L L
Sbjct: 44  YLPLAAGYELSLRLTDDREIQTYNSQYRHKDQPTDVLAFAALEVDLPVDEGILETEPLYL 103

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDI+++ E  + +A          L  L  H  LHLLG+DH D+     M  L+ ++L+ 
Sbjct: 104 GDIIISVETAQQQALTQNHSLARELAWLTAHACLHLLGWDHPDETSLLEMLSLQETLLKT 163

Query: 162 LGIN 165
           + + 
Sbjct: 164 VEMP 167


>gi|288574806|ref|ZP_06393163.1| protein of unknown function UPF0054 [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570547|gb|EFC92104.1| protein of unknown function UPF0054 [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 165

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK--GYFVKENIVELSLVFTDSHRIE 68
           + L+I + N   GD      L E V +  +S L  +    +   + V +S+   D   I 
Sbjct: 1   MKLEIGISNDE-GDPRPSAILDEEVLSLCISQLFDEVWPQWRMRDSVSISIATVDEETIR 59

Query: 69  TLNFEYRGIDKPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            LN  YRG D  T+VLSFP      F+  +  + L LGD+V+   I+   A    + ++ 
Sbjct: 60  QLNNSYRGCDSSTDVLSFPQWEDGVFSPPEEWTELPLGDVVICTSIVNRNAEERNESYDR 119

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS----ILEDLG 163
            +  ++ H  LHLLG+DH   +    M  L+       +E LG
Sbjct: 120 EMALMVFHSVLHLLGWDHDTQEKEAAMWSLQEKYRDIAMEKLG 162


>gi|257454806|ref|ZP_05620057.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
 gi|257447739|gb|EEV22731.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
          Length = 208

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 3/126 (2%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDI 104
           G F+ +  VEL +  T+      +N + RG D  TN+LS+ +    +  +   +L LG++
Sbjct: 83  GEFIFQKTVELEIYVTEPVEARAINLDARGKDYATNILSYASELPEAVLELLPALPLGEL 142

Query: 105 VLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLG 163
           V+ + ++  +A   GK  E HL HL++HG LHLLG+DH     +   ME +E ++L+ L 
Sbjct: 143 VICHAVVVSQAAEQGKTVEQHLTHLLVHGMLHLLGFDHELGQAEQDEMEAIEIAVLDKLS 202

Query: 164 INDPYE 169
           + +PYE
Sbjct: 203 VANPYE 208


>gi|116074016|ref|ZP_01471278.1| hypothetical protein RS9916_36237 [Synechococcus sp. RS9916]
 gi|116069321|gb|EAU75073.1| hypothetical protein RS9916_36237 [Synechococcus sp. RS9916]
          Length = 193

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 2/115 (1%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--GCSSLMLGDIVLAY 108
           K ++  L L  TD   I  LN  +R   +PT+VLSF     +    G   L LGDI+++ 
Sbjct: 59  KASMFSLGLQLTDDATIAELNGNWRQKPEPTDVLSFAALEKAPPFSGDPCLELGDIIVSV 118

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
                +A   G      L  L+ HGFLHLLG+DH D+     M   +  +L + G
Sbjct: 119 PTARRQATEHGHALLWELRWLVSHGFLHLLGWDHPDEAQLAAMLRRQEQLLNNGG 173


>gi|308513315|ref|NP_953333.3| hypothetical protein GSU2284 [Geobacter sulfurreducens PCA]
 gi|39984273|gb|AAR35660.1| conserved hypothetical protein TIGR00043 [Geobacter sulfurreducens
           PCA]
          Length = 114

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+V T    I  +N +Y G D+PTNV+SF          +  +LGD++++ +    EA 
Sbjct: 1   MSVVITGDLGIRRVNRDYLGKDRPTNVISFAMGEGDFGDLNPDVLGDVIISADTAAREAE 60

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSILEDL 162
             G  F + L  L++HG LH+ GYDH    + +A  ME  ER I   L
Sbjct: 61  EAGIAFWSRLCFLLLHGTLHITGYDHERSGEAEARRMEAKEREIFALL 108


>gi|116492868|ref|YP_804603.1| metal-dependent hydrolase [Pediococcus pentosaceus ATCC 25745]
 gi|122265668|sp|Q03F61|RRMF_PEDPA RecName: Full=Probable rRNA maturation factor
 gi|116103018|gb|ABJ68161.1| Predicted metal-dependent hydrolase [Pediococcus pentosaceus ATCC
           25745]
          Length = 156

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----- 99
           +  Y   +   E+S+    +  I  +N EYR +D+PT+V+SF    A  D          
Sbjct: 27  AGNYLHLDEETEISVTLMHNDEIHQINKEYRNVDRPTDVISFAINDADEDIIMDPEMAEE 86

Query: 100 ---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               +GD++++ + +  +A  LG  +E  L  L +HGFLHL GYDH++ +D   M  L++
Sbjct: 87  IPANIGDLMISVDKVAEQAEFLGHSYERELGFLCVHGFLHLNGYDHMEKEDQEKMFPLQK 146

Query: 157 SILEDLGIN 165
            I+   G+ 
Sbjct: 147 EIMNAYGLK 155


>gi|326532710|dbj|BAJ89200.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 526

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 10  RLDLQIAVENALWGDEI------HLRTLCEVVFAKAVSNLISKGYFVKE---------NI 54
            L +QI +E AL  D +       LRT        A  NL +  Y  ++         + 
Sbjct: 90  ELSVQIGIEEALPDDPLILSIAETLRTDAGKAMKLAFHNLGNSEYKTRDPCISNVDEYDS 149

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
           VE+SL+  D   I  LN E+R  D  T+VLS             L LGD+V++ E    +
Sbjct: 150 VEVSLLLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGL-QIPILQLGDLVISVETARRQ 208

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           A   G    + +  L++HG LHLLG+DH 
Sbjct: 209 AEERGHALLDEIRILMVHGLLHLLGFDHE 237


>gi|119493099|ref|ZP_01624024.1| hypothetical protein L8106_27841 [Lyngbya sp. PCC 8106]
 gi|119452844|gb|EAW34019.1| hypothetical protein L8106_27841 [Lyngbya sp. PCC 8106]
          Length = 196

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 32/188 (17%)

Query: 8   LPRLDLQIAVENALWGDEIH----------------------LRTLCEVVFAKAVSNLIS 45
           + ++ L++ V++  W  E                             E  F +  S  I 
Sbjct: 1   MSQVSLEVNVQDCFWLSEESETAPKQQKPPVDGSVENLSCPISPQTWEQWFTQWFS--IL 58

Query: 46  KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-------- 97
                +    EL+L  TD+  I+ LN +YR +D PT+VL+F T                 
Sbjct: 59  NPNIPQVRSYELNLRLTDNTEIQQLNAQYRSLDVPTDVLAFATLEVGFPKLPASEMKASQ 118

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           SL LGD+V++ E    +A   G   +  L  L  HGFLHLLG+DH DD+    M   +  
Sbjct: 119 SLDLGDLVISVETAARQAQQQGHSLKIELGWLAAHGFLHLLGWDHPDDRTLIQMLDQQVI 178

Query: 158 ILEDLGIN 165
           +L+ +G+ 
Sbjct: 179 MLQSVGLE 186


>gi|238060558|ref|ZP_04605267.1| metalloprotease [Micromonospora sp. ATCC 39149]
 gi|237882369|gb|EEP71197.1| metalloprotease [Micromonospora sp. ATCC 39149]
          Length = 157

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 19/161 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++IA E+ +  D        + V A A   L   G      + ELS++  D   +  L
Sbjct: 1   MSIEIANESGVDVD-------TDAVLAVARHALDEMGV---NPLAELSVLLVDIDYMTEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD---------GCSSLMLGDIVLAYEIIEIEANVLGKE 121
           N  + G D PT+VL+FP    S D         G    +LGDIVL  E+   +A   G  
Sbjct: 51  NHRWMGGDGPTDVLAFPMDEGSVDHGPGESSAAGGEPALLGDIVLCPEVAAKQAATAGHS 110

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             + L  L +HG LHLLGYDH + ++   M  L+  +L   
Sbjct: 111 SADELHLLTVHGVLHLLGYDHAEPEEEREMFELQARLLASW 151


>gi|168023436|ref|XP_001764244.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684684|gb|EDQ71085.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 268

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 11/160 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK------GYFVKENIVELSLVFTDS 64
           +++ + V++ L  DE     L  V   K  + L  K        F + + VELS++    
Sbjct: 111 VEVPVIVDDDL--DEADSSLLAVVEQLKLDAPLAVKLAIEGFEDFDQSDTVELSVLLCSD 168

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            RI  LN E+R  D PT+VLSF     +  G    +LGD+V++ E    +A   G    +
Sbjct: 169 SRIRELNKEWRRKDSPTDVLSFSQDQPA--GSPLTLLGDLVISVETAARQAEERGHTLID 226

Query: 125 HLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLG 163
            L  L +HG LH+L YDH    + +  ME  E  IL  LG
Sbjct: 227 ELRILFVHGLLHVLDYDHELGPEASKEMEEEENRILSALG 266


>gi|295099664|emb|CBK88753.1| conserved hypothetical protein TIGR00043 [Eubacterium cylindroides
           T2-87]
          Length = 151

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEI 113
           LS++F    +I  +N EYR ID PT+V+SF      SD     S   LGDI +  + I  
Sbjct: 40  LSVIFVTPEQIHEINKEYRKIDCPTDVISFALQDDLSDVLIEESMCELGDIFINVQAIRD 99

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           +A   G         L  HG LHL+GYDH++ ++  VM  L+  IL++
Sbjct: 100 QAKEYGHSLRREACFLFCHGLLHLMGYDHMEPEEEKVMFELQDVILDE 147


>gi|298493060|ref|YP_003723237.1| hypothetical protein Aazo_4995 ['Nostoc azollae' 0708]
 gi|298234978|gb|ADI66114.1| protein of unknown function UPF0054 ['Nostoc azollae' 0708]
          Length = 178

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 8/139 (5%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            +  F K +  L            E+ L  T+  +I+ LN +YR  +KPT+VL+F +   
Sbjct: 36  WKAWFDKWLEILTPD--LPPALSYEIGLRLTNDTQIQELNAQYRQENKPTDVLAFASLET 93

Query: 92  SSDGCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
                        L LGDI+++ +    +A          L  L  HG LHL+G+DH D+
Sbjct: 94  DFPQSEEMLASQPLYLGDIIVSLDTGNRQAQQQEHSLTTELAWLTAHGLLHLVGWDHPDE 153

Query: 146 KDACVMEGLERSILEDLGI 164
           +    M   +  +L+ +GI
Sbjct: 154 ESLMEMLKQQVILLDGVGI 172


>gi|322389991|ref|ZP_08063530.1| metalloprotease [Streptococcus parasanguinis ATCC 903]
 gi|321143304|gb|EFX38743.1| metalloprotease [Streptococcus parasanguinis ATCC 903]
          Length = 165

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     DEI  +T   + FA            + +   E+++ F  + R   L
Sbjct: 1   MYIEMVDETGQVSDEILKQTQEILEFA---------AQKIGKEDKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSFPT------AFASSDGCSSLML-----------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S         +F   D   +  L           G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPEMEISFDEEDLTENPELAEMMAEFDTYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 112 QAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFGLQEEILTAYGLT 163


>gi|145558817|sp|Q48UW8|RRMF_STRPM RecName: Full=Probable rRNA maturation factor
          Length = 165

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E      EI  +TL  + FA              +   E+S+ F  + R   L
Sbjct: 1   MYIEMIDETGQVSQEIMEQTLDLLNFA---------AQKTGKEEKEMSVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSF------PTAFASSDGCSSLML-----------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S       P  F+  D  +   L           G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPETPILFSQEDFAADPSLAEMMAEFDAYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 112 QSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEILTAYGLT 163


>gi|323704189|ref|ZP_08115768.1| protein of unknown function UPF0054 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536255|gb|EGB26027.1| protein of unknown function UPF0054 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 159

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 58/152 (38%), Gaps = 16/152 (10%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D   L  + E V   A+                    F D+  I  LN  YR +DK T+V
Sbjct: 13  DAQGLDRIVEDVVRTALEVEGVVDDVEVSVS------FVDNEEIHKLNKYYRNVDKETDV 66

Query: 84  LSFPTAFASSDGCSSL----------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           LSFP                       +GDIV++ E  + +A   G  F   + +L  H 
Sbjct: 67  LSFPLVEFEEIYTDIDEEDDDLDEVQPIGDIVISLEKAKQQAEEYGHSFIREVAYLTAHS 126

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             HL+GYDH  + +  VM   E  ++  L I 
Sbjct: 127 MFHLMGYDHETEDEKKVMRAKEEEVMRRLKIE 158


>gi|254423789|ref|ZP_05037507.1| conserved hypothetical protein TIGR00043, putative [Synechococcus
           sp. PCC 7335]
 gi|196191278|gb|EDX86242.1| conserved hypothetical protein TIGR00043, putative [Synechococcus
           sp. PCC 7335]
          Length = 166

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 8/132 (6%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
            F   +++L  K         E+SL  T    I+ LN ++R  +KPT+VLSF        
Sbjct: 34  WFKTWLADLDPK--ISPIGAYEVSLRLTSDAEIQQLNSDFRQQEKPTDVLSFAALETEIP 91

Query: 95  GCS------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                     + LGDI+++ E    +A       E  L  L  HG LHLLG+DH ++   
Sbjct: 92  QLQNVYQQQPVYLGDIIVSIETASRQAVENRHSLERELAWLCAHGLLHLLGWDHPNEDRL 151

Query: 149 CVMEGLERSILE 160
             M   +  +L 
Sbjct: 152 TQMLDRQALLLN 163


>gi|319957260|ref|YP_004168523.1| hypothetical protein Nitsa_1526 [Nitratifractor salsuginis DSM
           16511]
 gi|319419664|gb|ADV46774.1| protein of unknown function UPF0054 [Nitratifractor salsuginis DSM
           16511]
          Length = 142

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 6/135 (4%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L E     A+     +         E+ ++ TD   I  LN E+R  DK T+VLSFP   
Sbjct: 3   LLENQTDTAIETAHLEPIAKALTDREIEVILTDDATIRELNREHRDKDKATDVLSFPLE- 61

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                     LG +V++ + +  +A  LG   E  L  L IHG LHLLGYDH  D     
Sbjct: 62  ---GDLPGQPLGSLVISLDHVVQKAGELGHAPEEELALLFIHGLLHLLGYDHETD--RGE 116

Query: 151 MEGLERSILEDLGIN 165
           M   E  ++   G+ 
Sbjct: 117 MRAKEAELIRRFGLP 131


>gi|168187766|ref|ZP_02622401.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169294380|gb|EDS76513.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 166

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 24/165 (14%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           ++ +  DE  L TL E++        +           E+S+V  D++ I+ +N + R I
Sbjct: 8   QDKIEIDEKILHTLEEIIKYALKEEEVYVN-------TEVSVVLIDNNTIKEINKQTRDI 60

Query: 78  DKPTNVLSFPTAFASSDGC-----------------SSLMLGDIVLAYEIIEIEANVLGK 120
           DK T+VLSFP                            L+LGDIVL+ E  E +    G 
Sbjct: 61  DKVTDVLSFPMLDYPKGETYKEVYKDYEFDASYLDEGELVLGDIVLSLERAEEQRKEFGH 120

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            F   + +L IH  LHLLGYDH++D +  +M   E  IL    I 
Sbjct: 121 SFLREVCYLTIHSVLHLLGYDHMEDDEKIIMRKREEEILNKFSIK 165


>gi|15674590|ref|NP_268764.1| putative metalloprotease [Streptococcus pyogenes M1 GAS]
 gi|19745597|ref|NP_606733.1| metalloprotease [Streptococcus pyogenes MGAS8232]
 gi|28896434|ref|NP_802784.1| metalloprotease [Streptococcus pyogenes SSI-1]
 gi|56808802|ref|ZP_00366516.1| COG0319: Predicted metal-dependent hydrolase [Streptococcus
           pyogenes M49 591]
 gi|139474289|ref|YP_001129005.1| metalloprotease [Streptococcus pyogenes str. Manfredo]
 gi|209558957|ref|YP_002285429.1| putative metalloprotease [Streptococcus pyogenes NZ131]
 gi|306827876|ref|ZP_07461144.1| probable metalloprotease [Streptococcus pyogenes ATCC 10782]
 gi|54039916|sp|P67141|RRMF_STRP3 RecName: Full=Probable rRNA maturation factor
 gi|54039950|sp|P67142|RRMF_STRP8 RecName: Full=Probable rRNA maturation factor
 gi|54042635|sp|P67140|RRMF_STRP1 RecName: Full=Probable rRNA maturation factor
 gi|73920979|sp|Q5XDG5|RRMF_STRP6 RecName: Full=Probable rRNA maturation factor
 gi|145558819|sp|Q1J824|RRMF_STRPF RecName: Full=Probable rRNA maturation factor
 gi|145558820|sp|Q1JN23|RRMF_STRPC RecName: Full=Probable rRNA maturation factor
 gi|145558822|sp|Q1JI69|RRMF_STRPD RecName: Full=Probable rRNA maturation factor
 gi|145558825|sp|Q1JD48|RRMF_STRPB RecName: Full=Probable rRNA maturation factor
 gi|166231383|sp|A2RG22|RRMF_STRPG RecName: Full=Probable rRNA maturation factor
 gi|226701662|sp|B5XK72|RRMF_STRPZ RecName: Full=Probable rRNA maturation factor
 gi|13621700|gb|AAK33485.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|19747723|gb|AAL97232.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
 gi|28811685|dbj|BAC64617.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
 gi|134272536|emb|CAM30801.1| conserved hypothetical protein [Streptococcus pyogenes str.
           Manfredo]
 gi|209540158|gb|ACI60734.1| hypothetical protein Spy49_0401 [Streptococcus pyogenes NZ131]
 gi|304429924|gb|EFM32965.1| probable metalloprotease [Streptococcus pyogenes ATCC 10782]
          Length = 165

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E      EI  +TL  + FA              +   E+S+ F  + R   L
Sbjct: 1   MYIEMIDETGQVSQEIMEQTLDLLNFA---------AQKTGKEEKEMSVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLS----------FPTAFASSDGCSSLM-------LGDIVLAYEIIEI 113
           N EYR  D+PT+V+S          F     ++D   + M       +G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPETPILFSQEDLAADPSLAEMMAEFDAYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           ++   G  FE  +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 112 QSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEEILTAYGLT 163


>gi|322385837|ref|ZP_08059480.1| metalloprotease [Streptococcus cristatus ATCC 51100]
 gi|321270122|gb|EFX53039.1| metalloprotease [Streptococcus cristatus ATCC 51100]
          Length = 165

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSQEIIKQTQEILEFAAQKTGKENKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAFDEEDLADNPELTEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|301165909|emb|CBW25482.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 206

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 12/145 (8%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
            V  K +      G        EL L       I+ LN E+R  DK T+VLSFP   +  
Sbjct: 58  KVLQKFIQGTELDGRVKNCENFELDLSLCSEDEIKELNSEHRDKDKVTDVLSFPGYDSLR 117

Query: 94  DGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH-VDD 145
            G   L +       GDIV+  E+ + +A      +E  LVHL +HGFLHL GYDH + +
Sbjct: 118 KGAEDLFIFEENLHFGDIVICREVCQKQAQEFAITYEQELVHLFVHGFLHLCGYDHEISE 177

Query: 146 KDACVMEGLER----SILEDLGIND 166
           ++  +   LE      I E++G+++
Sbjct: 178 EEDKIHFSLEELLVKEIYENMGLDN 202


>gi|291522236|emb|CBK80529.1| conserved hypothetical protein TIGR00043 [Coprococcus catus GD/7]
          Length = 166

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 19/164 (11%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N  +  +  L    E +  + ++  +   +       E+++V T +  I  +N +YR + 
Sbjct: 4   NIDYEADKKLDFDYEKIIREVINGALD--FEECPYETEVNVVLTTNDEIAMINRDYRDLF 61

Query: 79  KPTNVLSFPT-----------------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           KPT+VLSFP                      +     L+LGDI+L+ + I  +A   G  
Sbjct: 62  KPTDVLSFPMIDYVRPGDFSVLEEGLTEDFFNPESGELILGDIILSVDKIIEQAASYGHS 121

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            +  L  L+ H  LHL GYDH+ D++  VME  +R IL  L + 
Sbjct: 122 QQRELGFLVAHSMLHLFGYDHMQDEEREVMEEKQRDILNMLNLK 165


>gi|312868384|ref|ZP_07728584.1| translation metalloprotein YbeY [Streptococcus parasanguinis F0405]
 gi|311096129|gb|EFQ54373.1| translation metalloprotein YbeY [Streptococcus parasanguinis F0405]
          Length = 165

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     DEI  +T   + FA            + +   E+++ F  + R   L
Sbjct: 1   MYIEMVDETGQVSDEILKQTQEILEFA---------AQKIGKEDKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSFPT------AFASSDGCSSLML-----------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S         +F   D   +  L           G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPEMEISFDEEDLAENPELAEMMAEFDTYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 112 QAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFGLQEEILTAYGLT 163


>gi|270291319|ref|ZP_06197541.1| metalloprotease [Pediococcus acidilactici 7_4]
 gi|270280165|gb|EFA26001.1| metalloprotease [Pediococcus acidilactici 7_4]
          Length = 156

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----- 99
           +  Y   +   E+S+    +  I+ +N EYR +D+PT+V+SF       D          
Sbjct: 27  AGNYLKLDVATEISVTLMHNDEIQKINREYRNVDRPTDVISFAINDEDEDIIMDPEMAEE 86

Query: 100 ---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               +GD++++ + +  +A  LG  +E  L  L +HGFLHL GYDH+  +D   M  L++
Sbjct: 87  IPDNIGDLMISVDKVAEQAEFLGHSYERELGFLCVHGFLHLNGYDHMKKEDQEKMFPLQK 146

Query: 157 SILEDLGIN 165
            I+   G+ 
Sbjct: 147 EIMSAYGLE 155


>gi|322420984|ref|YP_004200207.1| hypothetical protein GM18_3497 [Geobacter sp. M18]
 gi|320127371|gb|ADW14931.1| protein of unknown function UPF0054 [Geobacter sp. M18]
          Length = 121

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 2/111 (1%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
             ELS+       I  LN EY G DK TNV+SF          +  +LGD+V++ +    
Sbjct: 5   EAELSISIVGDRAIRVLNREYLGRDKATNVISFAMQEGEFGSVNPDLLGDVVVSVDTAAR 64

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDD--KDACVMEGLERSILEDL 162
           EA   G+ F + L  L++HG LH+ G+DH      +A  ME  ER I   L
Sbjct: 65  EAEEGGETFLSRLYFLVLHGILHITGFDHERSGVAEAARMEAKEREIFAFL 115


>gi|55820696|ref|YP_139138.1| putative metalloprotease [Streptococcus thermophilus LMG 18311]
 gi|55822587|ref|YP_141028.1| putative metalloprotease [Streptococcus thermophilus CNRZ1066]
 gi|116627504|ref|YP_820123.1| putative metalloprotease [Streptococcus thermophilus LMD-9]
 gi|62901187|sp|Q5M0P3|RRMF_STRT1 RecName: Full=Probable rRNA maturation factor
 gi|62901191|sp|Q5M579|RRMF_STRT2 RecName: Full=Probable rRNA maturation factor
 gi|122267898|sp|Q03LJ5|RRMF_STRTD RecName: Full=Probable rRNA maturation factor
 gi|55736681|gb|AAV60323.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738572|gb|AAV62213.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
 gi|116100781|gb|ABJ65927.1| Predicted metal-dependent hydrolase [Streptococcus thermophilus
           LMD-9]
 gi|312278022|gb|ADQ62679.1| Putative metalloprotease [Streptococcus thermophilus ND03]
          Length = 165

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + E +  + +  L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEIKKQTLELLDFAAQKLGKKDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                 F   D   +  L           G++ ++ +    +A   G  +E  +  L +H
Sbjct: 71  PELDITFDEEDLAENPELAEMMGEFDSYIGELFISIDKAREQAEEYGHSYEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|304385069|ref|ZP_07367415.1| metal-dependent hydrolase [Pediococcus acidilactici DSM 20284]
 gi|304329263|gb|EFL96483.1| metal-dependent hydrolase [Pediococcus acidilactici DSM 20284]
          Length = 157

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL----- 99
           +  Y   +   E+S+    +  I+ +N EYR +D+PT+V+SF       D          
Sbjct: 28  AGNYLKLDVATEISVTLMHNDEIQKINREYRNVDRPTDVISFAINDEDEDIIMDPEMAEE 87

Query: 100 ---MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               +GD++++ + +  +A  LG  +E  L  L +HGFLHL GYDH+  +D   M  L++
Sbjct: 88  IPDNIGDLMISVDKVAEQAEFLGHSYERELGFLCVHGFLHLNGYDHMKKEDQEKMFPLQK 147

Query: 157 SILEDLGIN 165
            I+   G+ 
Sbjct: 148 EIMSAYGLE 156


>gi|296876079|ref|ZP_06900133.1| probable metalloprotease [Streptococcus parasanguinis ATCC 15912]
 gi|296432790|gb|EFH18583.1| probable metalloprotease [Streptococcus parasanguinis ATCC 15912]
          Length = 165

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     DEI  +T   + FA            + +   E+++ F  + R   L
Sbjct: 1   MYIEMVDETGQVSDEILKQTQEILEFAAK---------KIGKEDKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSFPT------AFASSDGCSSLML-----------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S         +F   D   +  L           G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPEMEISFDEEDLAENPELAEMMAEFDTYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 112 QAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFGLQEEILTAYGLT 163


>gi|78185693|ref|YP_378127.1| hypothetical protein Syncc9902_2126 [Synechococcus sp. CC9902]
 gi|123580639|sp|Q3AUM7|RRMF_SYNS9 RecName: Full=Probable rRNA maturation factor
 gi|78169987|gb|ABB27084.1| Protein of unknown function UPF0054 [Synechococcus sp. CC9902]
          Length = 180

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 4/138 (2%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           L+   E+V  ++  +L       +   V L L FT+   I  LN ++R    PT+VLSF 
Sbjct: 32  LQQWIELV--RSNPDLSCPSVVRQAPEVSLGLHFTNDAGIAELNSQWRQKSGPTDVLSFA 89

Query: 88  TAFASSDGCSSLM--LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
               + D        LGDI+++ +  + +A          L  LI HG LHLLG+DH D+
Sbjct: 90  ALDDTPDWLEGEAVELGDIIVSVDTAQRQAQNHNHSLGYELHWLISHGLLHLLGWDHPDE 149

Query: 146 KDACVMEGLERSILEDLG 163
           +    M  L+  +L+  G
Sbjct: 150 RRLSGMLALQERLLDSTG 167


>gi|56751122|ref|YP_171823.1| putative metalloprotease [Synechococcus elongatus PCC 6301]
 gi|81299213|ref|YP_399421.1| putative metalloprotease [Synechococcus elongatus PCC 7942]
 gi|62901410|sp|Q5N317|RRMF_SYNP6 RecName: Full=Probable rRNA maturation factor
 gi|123557443|sp|Q31R85|RRMF_SYNE7 RecName: Full=Probable rRNA maturation factor
 gi|56686081|dbj|BAD79303.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81168094|gb|ABB56434.1| Protein of unknown function UPF0054 [Synechococcus elongatus PCC
           7942]
          Length = 174

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 11/166 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           + L  L +Q+A  + L   ++  +   +         L       +    E  L F D  
Sbjct: 1   MALLDLTVQMACSDRL--PDLPWQDWLDRWLTDIQPQLPED---WQAPTYEACLRFVDDA 55

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFAS----SDGCSSLMLGDIVLAYEIIEIEANVLGKE 121
            I+ LN +YR +DKPT+VL+F           D    L LGD++++    + +A   G  
Sbjct: 56  EIQQLNRDYRQLDKPTDVLAFAALEDELALGFDPEEPLYLGDVIISVPTAQRQA--QGHA 113

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
            E  LV L  HG LHLLG+DH +++    M   +   L+ + +  P
Sbjct: 114 LETELVWLSAHGLLHLLGWDHPNEEQLAAMLTQQERWLQLVAVPVP 159


>gi|27904874|ref|NP_778000.1| hypothetical protein bbp393 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29428175|sp|P59478|RRMF_BUCBP RecName: Full=Probable rRNA maturation factor
 gi|27904272|gb|AAO27105.1| hypothetical protein YbeY [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 154

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 12/158 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++QIA +  ++     L   C+ +       + S    V ++ +++ +   +   I++L
Sbjct: 7   LNIQIASKKIIF-----LPKKCQYLIW-----IRSSLMHVYQSNIKVLIRIVEKSEIKSL 56

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N+++R  +K TN+LSF     +        +GD+++  EI+  EA       E+H  H+ 
Sbjct: 57  NYKFRQKNKATNILSFSYI--NDKMIDKNYIGDLIICSEIVTEEAKKKNVTLESHWAHIT 114

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           IHG LHLLGY+H +  +   ME LE  I+  L   +PY
Sbjct: 115 IHGILHLLGYNHDNLNNRIKMEYLETKIMASLNYKNPY 152


>gi|283458061|ref|YP_003362672.1| putative metal-dependent hydrolase [Rothia mucilaginosa DY-18]
 gi|283134087|dbj|BAI64852.1| predicted metal-dependent hydrolase [Rothia mucilaginosa DY-18]
          Length = 173

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 10/169 (5%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK------GYFVKENIVELSLVFTDSH 65
           +++   E    G +          F    + ++++            +   LS+   +  
Sbjct: 3   EIEFDCEEPATGADPATDAFIRESFEAVDTEVLTRLVEHAFKRMHLADDTYLSIAIVNED 62

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
            +E ++ E+  +   T+V+SFP         +  SS MLGDI+L   +   +    G   
Sbjct: 63  EMERVHIEWMDLPGATDVMSFPMDELEPGTPENPSSGMLGDIILCPPVAARQGADAGHST 122

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
            + L  L  HG LH LGYDH   ++   M G++RSILE+ LG   P E 
Sbjct: 123 LDELCLLTTHGILHCLGYDHGTAEEEAEMFGIQRSILEEFLGRPAPVET 171


>gi|17061811|gb|AAK74138.1| C21orf57 isoform A protein [Homo sapiens]
          Length = 299

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI 
Sbjct: 165 QKFDLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIF 224

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 225 LGVEYIFHQCKE-NEDYNDVLTVTATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 281


>gi|159902741|ref|YP_001550085.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9211]
 gi|238687124|sp|A9BD43|RRMF_PROM4 RecName: Full=Probable rRNA maturation factor
 gi|159887917|gb|ABX08131.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9211]
          Length = 189

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)

Query: 7   NLPRLDLQIA---------VENALWGDEIHLRTLCEVV--FAKAVSNLISKGYFVKENIV 55
           N   +DL +          + N  + +E   R+  +V   + +   N +        N +
Sbjct: 7   NRFEIDLDLVFHSYQDAHLINNIFFNNEALWRSNLKVWIDYVRRNDNYLCPAIVRSVNCL 66

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIE 112
            + L FTD   I  +N ++R  ++PT+VLSFP     S          LGDI+++ +  +
Sbjct: 67  SIGLQFTDDKSIMKINQQWRAKEEPTDVLSFPVIDQDSIAPPPNHFLELGDIIVSVQTAQ 126

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            +A+      +  L  L+ HG LHLLG+DH+++     M   +  +L+
Sbjct: 127 KQADENNHSLDKELCWLVSHGLLHLLGWDHLNEHSLDQMLSFQDKLLQ 174


>gi|319778546|ref|YP_004129459.1| metal-dependent hydrolase [Taylorella equigenitalis MCE9]
 gi|317108570|gb|ADU91316.1| metal-dependent hydrolase [Taylorella equigenitalis MCE9]
          Length = 162

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 5/143 (3%)

Query: 27  HLRTLCEVVFAKAVSNLISKGY-FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
               L            + + + FV+ +  EL+L F        LN  YR  +   N+L+
Sbjct: 23  PFEELPRQTLRTWALAAVKRAHEFVEFDSAELNLRFVGPEEARNLNSVYRKKEYVPNILT 82

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F     + D    ++  DI++  +I+  EA   GK  + H  HL++HG LH  G+DH+D+
Sbjct: 83  FDYGVDALD----VLRADIIICKDILLKEALDQGKSIKQHACHLVVHGVLHACGFDHMDE 138

Query: 146 KDACVMEGLERSILEDLGINDPY 168
           + A  ME LE  I++  G   PY
Sbjct: 139 ESAIEMESLEAEIVQSFGFPHPY 161


>gi|73540218|ref|YP_294738.1| putative metalloprotease [Ralstonia eutropha JMP134]
 gi|72117631|gb|AAZ59894.1| Protein of unknown function UPF0054 [Ralstonia eutropha JMP134]
          Length = 255

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/135 (37%), Positives = 67/135 (49%), Gaps = 7/135 (5%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
            K +   ++   +       L++ F D      LN  YRG D  TNVL+F  A +  D  
Sbjct: 122 RKQIETWVTSALYADAA---LTVRFVDEEEGRALNRSYRGKDYATNVLTFAYAESEDDPV 178

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +    GDIVL   ++E EA    K  E H  HLI+HG LH  GY+H DD +A  ME +E 
Sbjct: 179 T----GDIVLCCPVVETEAREQRKPLEAHYAHLIVHGVLHAQGYEHEDDAEAEEMEAIET 234

Query: 157 SILEDLGINDPYEVD 171
             L+ LG  DPY  D
Sbjct: 235 ETLQALGFEDPYRDD 249


>gi|119716145|ref|YP_923110.1| putative metalloprotease [Nocardioides sp. JS614]
 gi|166227491|sp|A1SHY8|RRMF_NOCSJ RecName: Full=Probable rRNA maturation factor
 gi|119536806|gb|ABL81423.1| protein of unknown function UPF0054 [Nocardioides sp. JS614]
          Length = 149

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E+    D   L  L   V  +   +           + EL +   D   I  L
Sbjct: 1   MSIEILNESGHPLDVKRLAALSRFVMDRMRVH----------PLAELCIKAVDEPTIAQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           N ++     PT+VL+FP          +     +LGD+VL  ++   +    G   E  +
Sbjct: 51  NEQWMEKAGPTDVLAFPMDELRPGLVDEDPEEGVLGDLVLCPDVAARQGETAGHGTEAEI 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             L +HG LHLLGYDH + ++   M GL+  +L   
Sbjct: 111 ELLTVHGILHLLGYDHAEPEEHREMFGLQDELLAAW 146


>gi|171060619|ref|YP_001792968.1| hypothetical protein Lcho_3949 [Leptothrix cholodnii SP-6]
 gi|170778064|gb|ACB36203.1| protein of unknown function UPF0054 [Leptothrix cholodnii SP-6]
          Length = 160

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 14/150 (9%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + D  H   L     A+ +   +       E   E ++   D+   + LN +YRG D  
Sbjct: 20  QFADPRHRAQLPRHHVARWIRAAL-------ELPGEFTVRIVDAEEAQGLNRDYRGKDYA 72

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           TNVL+F  +         ++  D+VL   ++E EA   GK    H  HL++HG LH  GY
Sbjct: 73  TNVLTFDYS------AEPVVAADLVLCAPVVEAEAAAAGKTLVAHYAHLLVHGALHAQGY 126

Query: 141 DHVDDKDACV-MEGLERSILEDLGINDPYE 169
           DH DD++A   ME  ER +L  LG +DPY 
Sbjct: 127 DHEDDEEAAECMEAREREVLAALGFDDPYA 156


>gi|320094218|ref|ZP_08026022.1| metalloprotease [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978843|gb|EFW10382.1| metalloprotease [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 149

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 14/150 (9%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           ++  E     D      L + V  +              +  EL+++F  +  +E L+ +
Sbjct: 3   EVLNETDYDIDCAEFAALADYVLTQM----------HVASDAELNILFIGAGPMEELHVK 52

Query: 74  YRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +  +  PT+V+SFP        + +     MLGDI +  E+   +A   G      ++ L
Sbjct: 53  WLDLPGPTDVMSFPMDELKPGTADNPTPPGMLGDICICPEVATRQAADSGHTAAEEMLLL 112

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             HG LHLLGYDH +D +   M  L+R +L
Sbjct: 113 ATHGILHLLGYDHAEDAERAEMFALQRKLL 142


>gi|225868114|ref|YP_002744062.1| hypothetical protein SZO_05050 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701390|emb|CAW98464.1| conserved hypothetical protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 181

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS--- 85
           + + + +  + +  L      + +   E+++ F  + R   LN EYR  D+PT+V+S   
Sbjct: 26  KQVSQEMMEQTIDLLNFAAKTIGKEDKEMAVTFVTNDRSHALNLEYRDTDRPTDVISLEY 85

Query: 86  -------FPTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLII 131
                  F       D   + ML       G++ ++ +    +A   G  FE  +  L +
Sbjct: 86  KPELPIAFSQEDLELDPDLAGMLQEFDAYIGELFISVDKAHEQAEAYGHSFEREMGFLAV 145

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 146 HGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 179


>gi|319946538|ref|ZP_08020773.1| metalloprotease [Streptococcus australis ATCC 700641]
 gi|319747284|gb|EFV99542.1| metalloprotease [Streptococcus australis ATCC 700641]
          Length = 165

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     DEI  +T   + FA            + +   E+++ F  + R   L
Sbjct: 1   MYIEMVDETGQVSDEILKQTQEILEFA---------AQKIGKEDKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSFPT------AFASSDGCSSLML-----------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S         +F   D   +  L           G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPEMEISFDEEDLEENPELAEMMAEFDTYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 112 QAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEKEMFGLQEEILTAYGLT 163


>gi|224370644|ref|YP_002604808.1| hypothetical protein HRM2_35790 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693361|gb|ACN16644.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 155

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +I    L +    + +S +++    +  +  ELS+V TD   I  LN  YRG  KPTNVL
Sbjct: 11  QIKTPKLSKSQINQKLSKILNA---LGYDNHELSVVITDDAHIMALNQTYRGKAKPTNVL 67

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SFP   +     +  +LGD+V++ E    EA+  G   +  L  L+IHG LHL+G+DH  
Sbjct: 68  SFPMLDSEFTSIAPQLLGDLVISVETAMREADEAGITLDERLSQLMIHGVLHLVGFDHEQ 127

Query: 145 -DKDACVMEGLERSILE 160
            + +A  ME     +L 
Sbjct: 128 GEDEAVKMEQRSLELLR 144


>gi|315604802|ref|ZP_07879861.1| probable metalloprotease [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313473|gb|EFU61531.1| probable metalloprotease [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 149

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAY 108
           +  E++++F +   +E L+  +  +  PT+V+SFP        +       MLGDI +  
Sbjct: 32  SDAEVNIIFIEPEPMEELHVRWLDLPGPTDVMSFPMDELKPGTADHPTPPGMLGDICICP 91

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           ++   +A   G      ++ L  HG LHLLGYDH  D +  VM  L+R +L
Sbjct: 92  QVAARQAAESGHSVAEEMLLLATHGMLHLLGYDHAHDAEREVMFALQRKLL 142


>gi|255327126|ref|ZP_05368201.1| putative metalloprotease AAur_2230 [Rothia mucilaginosa ATCC 25296]
 gi|255295744|gb|EET75086.1| putative metalloprotease AAur_2230 [Rothia mucilaginosa ATCC 25296]
          Length = 173

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 6/147 (4%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
              +   V  + V +   + +   +    LS+   +   +E ++ E+  +   T+V+SFP
Sbjct: 27  FEAVDTEVLTRLVEHAFKRMHLADDTY--LSIAIVNEDEMERVHIEWMDLPGATDVMSFP 84

Query: 88  TAFASS---DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
                    +  SS MLGDI+L   +   +    G    + L  L  HG LH LGYDH  
Sbjct: 85  MDELEPGTPENPSSGMLGDIILCPPVAARQGADAGHSTLDELCLLTTHGILHCLGYDHGT 144

Query: 145 DKDACVMEGLERSILED-LGINDPYEV 170
            ++   M G++RSILE+ LG   P E 
Sbjct: 145 AEEEAEMFGIQRSILEEFLGRPAPVET 171


>gi|304316656|ref|YP_003851801.1| hypothetical protein Tthe_1198 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778158|gb|ADL68717.1| protein of unknown function UPF0054 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 162

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 13/118 (11%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPT-------------AFASSDGCSSLMLGDIVLA 107
           F D+  I  LN  YR +D+ T+VLSFP               +   D      +GDIV++
Sbjct: 44  FVDNEEIHKLNKYYRNVDRETDVLSFPLVEFEEIYSDIDEENYDEDDAAGPEPIGDIVIS 103

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            E  + +A   G  F   + +L  H   HL+GYDH  D +  +M   E  ++  L I 
Sbjct: 104 LEKAKQQAEEYGHSFIREVAYLTAHSMFHLMGYDHETDDERKIMREKEDEVMRRLKIE 161


>gi|188591271|ref|YP_001795871.1| unkown domain/ metalloprotease fusion protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|170938165|emb|CAP63151.1| putative metal-dependent hydrolase, COG0319; putative
           diacylglycerol kinase [Cupriavidus taiwanensis LMG
           19424]
          Length = 251

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 7/135 (5%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
            + +   +    +       L++ F       TLN  YRG D  TNVL+F  A    D  
Sbjct: 118 RRKLETWVKSALYADAA---LTIRFVGEEEGRTLNRTYRGKDYATNVLTFAYAEREDDPV 174

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +    GDIVL   ++E EA    K  E H  HL++HG LH  GY+H DD +A  ME +E 
Sbjct: 175 T----GDIVLCCPVVEAEARAQRKPLEAHYAHLVVHGVLHAQGYEHEDDAEAEEMEAIET 230

Query: 157 SILEDLGINDPYEVD 171
             L+ LG  DPY  +
Sbjct: 231 ETLQALGYADPYRAE 245


>gi|222622464|gb|EEE56596.1| hypothetical protein OsJ_05956 [Oryza sativa Japonica Group]
          Length = 549

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K + VE+S++  D   I  LN E+R  D  T+VLS        D    L LGDIV++ + 
Sbjct: 161 KYDTVEVSILLCDDDFIRKLNKEWRDEDHATDVLSMSQHIPGLD-IPILQLGDIVISIDT 219

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
            + +A   G    + +  L++HG LHLLG+DH 
Sbjct: 220 AQRQAEERGHTLHDEIRILMVHGLLHLLGFDHE 252


>gi|197294661|ref|YP_001799202.1| hypothetical protein PAa_0617 [Candidatus Phytoplasma australiense]
 gi|226707789|sp|B1VAH8|RRMF_PHYAS RecName: Full=Probable rRNA maturation factor
 gi|171853988|emb|CAM11951.1| Conserved hypothetical protein [Candidatus Phytoplasma
           australiense]
          Length = 144

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 66/125 (52%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM 100
             L+ + +   +   ++ LVF    +I+ LN  +R  +  T+VLSFP  F+ +       
Sbjct: 17  QQLLIQLFSQIKENNQMHLVFVTKEKIKQLNTFFRKKNFVTDVLSFPNEFSFNPNLKDDS 76

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGD+ + +E  +++A  L    E  +  L++HGFLHL GY H ++++   M  L+  IL+
Sbjct: 77  LGDVFICFEQAQLQAQKLLHSLEREIAFLVVHGFLHLKGYQHNNEEELEKMIHLQEKILK 136

Query: 161 DLGIN 165
            + + 
Sbjct: 137 KINLE 141


>gi|284106930|ref|ZP_06386310.1| metalloprotease [Candidatus Poribacteria sp. WGA-A3]
 gi|283830003|gb|EFC34280.1| metalloprotease [Candidatus Poribacteria sp. WGA-A3]
          Length = 151

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
            E   E+ +      R+  LN  YR  D+ T+VL+F    A +    S +LGD+V++   
Sbjct: 31  DEAEAEVCIGLVGDTRMRRLNRTYRNQDRTTDVLAFAYREAQTGA--SPLLGDVVISVPA 88

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDL 162
              +A       +  ++ L+IHG LHL+GYDH   +  A  M   E    E  
Sbjct: 89  ARRQAKARSHSLDEEVLRLLIHGVLHLVGYDHERSQWQARRMRRKETECFETF 141


>gi|222056179|ref|YP_002538541.1| protein of unknown function UPF0054 [Geobacter sp. FRC-32]
 gi|221565468|gb|ACM21440.1| protein of unknown function UPF0054 [Geobacter sp. FRC-32]
          Length = 126

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS+       I  +N +Y   DK TNV+SF          +  MLGD+++  +    EA
Sbjct: 12  ELSISIVGDRTIRRINRDYLDRDKTTNVISFAMHEGDFSEINPQMLGDVIICADTASREA 71

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSILEDLG 163
                 F + L  L++HG LH+ GYDH    + +A  ME  ER I  +L 
Sbjct: 72  EEGDMPFFSRLSFLLLHGILHITGYDHERSGETEAARMEFREREIFGNLN 121


>gi|317508757|ref|ZP_07966408.1| hypothetical protein HMPREF9336_02780 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252951|gb|EFV12370.1| hypothetical protein HMPREF9336_02780 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 180

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++A E+ L   E  L  + +    +   N             ELS++  D+  +  L
Sbjct: 1   MSVELANESGLAAPEGMLIHVAQFALDQMRVN----------PAAELSMLLVDTSTMAHL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAYEIIEIEANVLGKEFEN 124
           + ++  +  PT+VLSFP   A  DG          +LGDIVL  E+   +A   G   E+
Sbjct: 51  HQQWMNLPGPTDVLSFPMDDAEPDGRPDAVEAAQTLLGDIVLCPEVAAEQAEAAGHSTEH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L+ L +HG LH+LGYDH + ++   M GL+  ++E  
Sbjct: 111 ELIVLTVHGVLHILGYDHAEPEEEAEMFGLQGKLVERW 148


>gi|260886787|ref|ZP_05898050.1| putative metalloprotease [Selenomonas sputigena ATCC 35185]
 gi|330839401|ref|YP_004413981.1| protein of unknown function UPF0054 [Selenomonas sputigena ATCC
           35185]
 gi|260863386|gb|EEX77886.1| putative metalloprotease [Selenomonas sputigena ATCC 35185]
 gi|329747165|gb|AEC00522.1| protein of unknown function UPF0054 [Selenomonas sputigena ATCC
           35185]
          Length = 179

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           +++ L    E    +AV  +   G        E+S+  TD   I  LN EYR ID+PT+V
Sbjct: 10  EDLPLDEGLEAEIRRAVEKV---GEIYDVADAEVSITLTDDAHIHVLNREYRRIDRPTDV 66

Query: 84  LSFPTAFASSDGCSSLM----LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           +SF    +     +       LGDIVL+ E    +A   G      +V L +HG LHLLG
Sbjct: 67  ISFALNESEEPAIAGGPAVNVLGDIVLSVERAAAQAADYGHSLRREIVFLTVHGMLHLLG 126

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YDHV++ +   ME  +R ++  LG+ 
Sbjct: 127 YDHVEEAERQEMEEEQRHVMAALGVT 152


>gi|254467928|ref|ZP_05081334.1| conserved hypothetical protein TIGR00043 [beta proteobacterium
           KB13]
 gi|207086738|gb|EDZ64021.1| conserved hypothetical protein TIGR00043 [beta proteobacterium
           KB13]
          Length = 144

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/117 (35%), Positives = 74/117 (63%), Gaps = 6/117 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           +   E+++  T +   + LN  YR  +KPTN+LSF      +   +  ++GD+VL ++I+
Sbjct: 30  KKDAEITVRITAASESQELNHHYRNQNKPTNILSF------NIESNKSLIGDLVLCHDIV 83

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           + EA    K+ ++H +HL++HGFLHL+G+DH+++KD  +ME +E   L+   I +PY
Sbjct: 84  KKEAKAQNKKIKDHYIHLVLHGFLHLMGHDHINEKDRLIMEKIEIKTLKLFNIQNPY 140


>gi|157150959|ref|YP_001450012.1| putative metalloprotease [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189040587|sp|A8AW52|RRMF_STRGC RecName: Full=Probable rRNA maturation factor
 gi|157075753|gb|ABV10436.1| conserved hypothetical protein TIGR00043 [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 165

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E  L  +EI  +T   + FA              +   E+++ F  + R   L
Sbjct: 1   MYIEIVDETGLVSEEIIKQTQDILEFA---------AQKTGKEKKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLML-----------------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S               L                 G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPELDIAVDEEDLLNHPELAEMLDDFDAYIGELFISVDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  F+  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 112 QAEEYGHSFKREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|15894575|ref|NP_347924.1| putative metalloprotease [Clostridium acetobutylicum ATCC 824]
 gi|26006917|sp|Q97JI7|RRMF_CLOAB RecName: Full=Probable rRNA maturation factor
 gi|15024222|gb|AAK79264.1|AE007641_10 Uncharacterized conserved predicted metal-binding protein, YQFG
           ortholog [Clostridium acetobutylicum ATCC 824]
 gi|325508707|gb|ADZ20343.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 166

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 17/128 (13%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----------------AFASSDGCS 97
            E+S++F D+  I  +N E R +DK T+VLSFP                           
Sbjct: 38  YEVSVIFVDNETIREINRENREVDKVTDVLSFPMLEYGEGKVFKDIYEECDFEDEYFDEG 97

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           +L+LGDI L+ E  E ++   G  F     +L +H  LHL+GYDH+ D+D   M   E  
Sbjct: 98  NLVLGDIALSLERAEEQSKEYGHSFLREAAYLTVHSVLHLMGYDHMVDEDKIKMRKREEE 157

Query: 158 ILEDLGIN 165
           IL    IN
Sbjct: 158 ILSHFDIN 165


>gi|306829341|ref|ZP_07462531.1| probable metalloprotease [Streptococcus mitis ATCC 6249]
 gi|304428427|gb|EFM31517.1| probable metalloprotease [Streptococcus mitis ATCC 6249]
          Length = 165

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYRG D+PT+V+S    
Sbjct: 11  QVSQEILQQTQEILEFAAQKIGKEDKEMAVTFVTNERSHELNLEYRGTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                +F   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDISFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|226443168|ref|NP_001140067.1| metalloprotease C21orf57 [Salmo salar]
 gi|221221630|gb|ACM09476.1| metalloprotease C21orf57 [Salmo salar]
          Length = 168

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +L+ +  +  A+   ++ +  + +     +L ++  D+ +I+ +N  YR  + PT+VLSF
Sbjct: 7   NLQNVVPLRRARLRKDVETLRHILGIQKFDLGVICVDNRKIQRINNIYRKKNMPTDVLSF 66

Query: 87  PTAFASSDGC-------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           P       G          L LGDI L  E +  +     ++    L  +  HG  HLLG
Sbjct: 67  PFYEELRPGKLPCPLYRDELNLGDIFLGVEYVMKQCQQQSQDLHGILTSVTAHGICHLLG 126

Query: 140 YDHVDDKDACVMEGLERSILEDLG 163
           Y H  +++   M   E  IL +  
Sbjct: 127 YRHETEEEWKEMLQKESYILNEFN 150


>gi|77405165|ref|ZP_00782263.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           H36B]
 gi|77411675|ref|ZP_00788014.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           CJB111]
 gi|77162247|gb|EAO73219.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           CJB111]
 gi|77176167|gb|EAO78938.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           H36B]
 gi|319745495|gb|EFV97799.1| metalloprotease [Streptococcus agalactiae ATCC 13813]
          Length = 165

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + E +  + +  L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEDIKKQTLDLLEFAAQKTGKENKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                +F   D   +  L           G++ ++ +  + +A   G  +E  +  L +H
Sbjct: 71  PEVDISFDEEDLTENPELAEMLEDFDSYIGELFISIDKAKEQAEEYGHSYEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEKEMFSLQEEILTAYGLK 163


>gi|322372541|ref|ZP_08047077.1| putative metalloprotease Str0617 [Streptococcus sp. C150]
 gi|321277583|gb|EFX54652.1| putative metalloprotease Str0617 [Streptococcus sp. C150]
          Length = 165

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + E +  + +  L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEIKKQTLELLDFAAQKLGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                 F   D   +  L           G++ ++ +    +A   G  +E  +  L +H
Sbjct: 71  PEVDITFDEEDLAENPELAEMMGEFDSYIGELFISVDKAHEQAEEYGHSYEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|325694803|gb|EGD36708.1| metalloprotease [Streptococcus sanguinis SK150]
 gi|332362401|gb|EGJ40201.1| metalloprotease [Streptococcus sanguinis SK1056]
          Length = 165

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKGNKEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|83319995|ref|YP_424481.1| hypothetical protein MCAP_0508 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|123535679|sp|Q2SRY2|RRMF_MYCCT RecName: Full=Probable rRNA maturation factor
 gi|83283881|gb|ABC01813.1| conserved hypothetical protein, TIGR00043 [Mycoplasma capricolum
           subsp. capricolum ATCC 27343]
          Length = 164

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 2/119 (1%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--GCSSLML 101
           I+  YF     +ELS+ F D  + + +N +YR      +V SFP     ++        L
Sbjct: 27  IAYNYFNFNYDIELSITFVDDLKAQQINQQYRNHSYIADVTSFPVEMTENEIKAIGFREL 86

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           GD+ +     + +A     +  + +  L +HGFLHLLGYDH +  D  +M  L+  IL+
Sbjct: 87  GDMFINLSEAKRKAIKYNHDLNSEMGFLFVHGFLHLLGYDHENLDDEKIMFDLQDQILK 145


>gi|22537644|ref|NP_688495.1| metalloprotease [Streptococcus agalactiae 2603V/R]
 gi|76788021|ref|YP_330133.1| metalloprotease [Streptococcus agalactiae A909]
 gi|22534530|gb|AAN00368.1|AE014260_24 conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           2603V/R]
 gi|76563078|gb|ABA45662.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           A909]
          Length = 161

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS---- 85
            + E +  + +  L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 7   QVSEDIKKQTLDLLEFAAQKTGKENKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 66

Query: 86  ------FPTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                 F     + +   + ML       G++ ++ +  + +A   G  +E  +  L +H
Sbjct: 67  PEVDISFDEEDLAENPELAEMLEDFDSYIGELFISIDKAKEQAEEYGHSYEREMGFLAVH 126

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 127 GFLHINGYDHYTPEEEKEMFSLQEEILTAYGLK 159


>gi|311113631|ref|YP_003984853.1| metalloprotease [Rothia dentocariosa ATCC 17931]
 gi|310945125|gb|ADP41419.1| probable metalloprotease [Rothia dentocariosa ATCC 17931]
          Length = 173

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 10/168 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK------GYFVKENIVELSLVFTDSHR 66
           L   VE+           L    FA   + ++S                 LS+      +
Sbjct: 4   LDFHVEDPNEKPGNVTTQLIHDAFASVDTEVLSNLVDYIFAKLFISKDTYLSIAVVGEKQ 63

Query: 67  IETLNFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +E ++ E+  +   T+V+SFP       + D  +  MLGDIVL   +   +    G    
Sbjct: 64  MEKIHLEWMDLPGATDVMSFPMDELVPGTEDELAQGMLGDIVLCPPVAARQGADAGHSTL 123

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
           + L  L  HG LH LGYDH   ++   M GL+RS+LE  LG   P E 
Sbjct: 124 DELCLLTTHGILHCLGYDHGTAQEEAEMFGLQRSLLEGFLGRAAPVET 171


>gi|291401045|ref|XP_002716899.1| PREDICTED: C21orf57 isoform A protein-like [Oryctolagus cuniculus]
          Length = 164

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L +V  D+  I+ +N  YRG + PT+VLSFP         F   D      LGDI 
Sbjct: 33  QTFDLGVVCVDNRSIQRINRVYRGKNAPTDVLSFPFHENLKAGEFPQPDSPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E  +L++L
Sbjct: 93  LGVEYIFQQCKD-KEDYYDALAVTATHGLCHLLGFTHSTEAEWRKMYQKEEQVLQEL 148


>gi|86606284|ref|YP_475047.1| hypothetical protein CYA_1624 [Synechococcus sp. JA-3-3Ab]
 gi|86554826|gb|ABC99784.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 198

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 7/135 (5%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E  + +     + +      +  ELSL  T    I  LN E+R ID PT+VL+F     S
Sbjct: 54  EATWHRWFEVWLRELGVT--DPCELSLCLTSDEHIRQLNREFRHIDAPTDVLAFAAEETS 111

Query: 93  SDG-----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
           +           +LGDIV++      +A   G+     L  L  HG LHLLG+DH D+  
Sbjct: 112 TPVELQKITGVRLLGDIVISVPTACAQAKAQGQRLSRELAWLASHGLLHLLGWDHPDELS 171

Query: 148 ACVMEGLERSILEDL 162
              M   +  +L  +
Sbjct: 172 LQRMLQQQHHLLAAI 186


>gi|325690750|gb|EGD32751.1| metalloprotease [Streptococcus sanguinis SK115]
 gi|325696182|gb|EGD38073.1| metalloprotease [Streptococcus sanguinis SK160]
          Length = 165

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E     +EI  +T   + FA              +   E+++ F  + R   L
Sbjct: 1   MYIEIVDETGQVSEEILKQTQEILEFA---------AQKTGKENKEMAVTFVSNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLML-----------------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S               L                 G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 112 QAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|73667540|ref|YP_303556.1| hypothetical protein Ecaj_0927 [Ehrlichia canis str. Jake]
 gi|123614591|sp|Q3YQP7|RRMF_EHRCJ RecName: Full=Probable rRNA maturation factor
 gi|72394681|gb|AAZ68958.1| protein of unknown function UPF0054 [Ehrlichia canis str. Jake]
          Length = 154

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 4/133 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K + N       + E    +S+V  ++  ++ LN+EYR  +KPTNVLSFP        
Sbjct: 21  FVKNIINTSLIDLNIYEYKPIISIVLANNKLLQQLNYEYRKKNKPTNVLSFPYNKLD--- 77

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
             +  LG+I ++ +++  E+  L    E+H  H++IHG LH+L YDH +  D  +ME +E
Sbjct: 78  -KNCYLGEIFISLDVLMNESVDLNIPIEHHTSHMLIHGLLHILDYDHEEPLDQYIMESIE 136

Query: 156 RSILEDLGINDPY 168
             +L+ LGI +PY
Sbjct: 137 IKLLDKLGIKNPY 149


>gi|301321025|gb|ADK69668.1| metalloprotein, YbeY family [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 151

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 36  FAKAVSNLISK---GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           F K   N I K    YF     +ELS+ F +  + + +N +YR      +V SFP     
Sbjct: 3   FWKKFCNKILKTAYNYFNFNYDIELSITFVNDLKAQQINQQYRNHSYIADVTSFPVEMTE 62

Query: 93  SD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           ++        LGD+ +     + +A     +  + +  L +HGFLHLLGYDH D  D  +
Sbjct: 63  NEIKAIGFRELGDMFINLNEAKRKAIKYNHDLNSEMGFLFVHGFLHLLGYDHEDSNDEKI 122

Query: 151 MEGLERSILE 160
           M  L+  IL+
Sbjct: 123 MFDLQDQILK 132


>gi|269120554|ref|YP_003308731.1| hypothetical protein Sterm_1944 [Sebaldella termitidis ATCC 33386]
 gi|268614432|gb|ACZ08800.1| protein of unknown function UPF0054 [Sebaldella termitidis ATCC
           33386]
          Length = 152

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           + E    + V  ++            +S + T +  I+ +N EYRG D PT+V+SF    
Sbjct: 17  MDEEKINEFVDMILEYEKLENTENTYVSFLITTNDVIQNINSEYRGKDTPTDVISFAYNE 76

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
             + G   + LGDI+++ E +  +A   G   E    +++ HG LHLLGYDH+DD+D  V
Sbjct: 77  TENIGPFDI-LGDIIISAEKVTEQAKEYGHSTEREFYYVLCHGMLHLLGYDHIDDEDKKV 135

Query: 151 ME 152
           M 
Sbjct: 136 MR 137


>gi|25011603|ref|NP_735998.1| metalloprotease [Streptococcus agalactiae NEM316]
 gi|77408558|ref|ZP_00785294.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           COH1]
 gi|77413993|ref|ZP_00790166.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           515]
 gi|54040165|sp|P67139|RRMF_STRA5 RecName: Full=Probable rRNA maturation factor
 gi|54042634|sp|P67138|RRMF_STRA3 RecName: Full=Probable rRNA maturation factor
 gi|145572758|sp|Q3K020|RRMF_STRA1 RecName: Full=Probable rRNA maturation factor
 gi|24413143|emb|CAD47221.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77159973|gb|EAO71111.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           515]
 gi|77172832|gb|EAO75965.1| conserved hypothetical protein TIGR00043 [Streptococcus agalactiae
           COH1]
          Length = 165

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS---- 85
            + E +  + +  L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEDIKKQTLDLLEFAAQKTGKENKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 86  ------FPTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                 F     + +   + ML       G++ ++ +  + +A   G  +E  +  L +H
Sbjct: 71  PEVDISFDEEDLAENPELAEMLEDFDSYIGELFISIDKAKEQAEEYGHSYEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEKEMFSLQEEILTAYGLK 163


>gi|317125261|ref|YP_004099373.1| hypothetical protein Intca_2136 [Intrasporangium calvum DSM 43043]
 gi|315589349|gb|ADU48646.1| protein of unknown function UPF0054 [Intrasporangium calvum DSM
           43043]
          Length = 155

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E     DE+ L         +   +             +L +   D   +  L
Sbjct: 1   MSIDVLNETDERVDELELLACARYCMEQMRVH----------PQADLCIKLVDEPAMSVL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++  +  PT+V+SFP                 LGDIVL   +   +A   G      +
Sbjct: 51  HEQWMDLPGPTDVMSFPMDELRPGREGQEPEEGTLGDIVLCPSVATRQAAEAGHAPMEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLGYDH +  +   M  L+R +L
Sbjct: 111 LLLTTHGILHLLGYDHAEPDEEREMFELQRQLL 143


>gi|289806764|ref|ZP_06537393.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 98

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 2/91 (2%)

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           TNVLSFP  F +  G    +LGD+++  +++E EA    K  E H  H+++HG LHLLGY
Sbjct: 6   TNVLSFP--FEAPPGIEMPLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGY 63

Query: 141 DHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           DH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 64  DHIDDDEAEEMESLETEIMLAMGYEDPYIAE 94


>gi|328946701|gb|EGG40839.1| putative metalloprotease [Streptococcus sanguinis SK1087]
          Length = 165

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEGILKQTQEILEFAAQKTGKENKEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|42560996|ref|NP_975447.1| hypothetical protein MSC_0461 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|59799038|sp|Q6MTE7|RRMF_MYCMS RecName: Full=Probable rRNA maturation factor
 gi|42492493|emb|CAE77089.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
          Length = 164

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 36  FAKAVSNLISK---GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           F K   N I K    YF     +ELS+ F +  + + +N +YR      +V SFP     
Sbjct: 16  FWKKFCNKILKTAYNYFNFNYDIELSITFVNDLKAQQINQQYRNHSYIADVTSFPVEMTE 75

Query: 93  SD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           ++        LGD+ +     + +A     +  + +  L +HGFLHLLGYDH D  D  +
Sbjct: 76  NEIKAIGFRELGDMFINLNEAKRKAIKYNHDLNSEMGFLFVHGFLHLLGYDHEDSNDEKI 135

Query: 151 MEGLERSILE 160
           M  L+  IL+
Sbjct: 136 MFDLQDQILK 145


>gi|270292909|ref|ZP_06199120.1| putative metalloprotease [Streptococcus sp. M143]
 gi|270278888|gb|EFA24734.1| putative metalloprotease [Streptococcus sp. M143]
          Length = 165

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSQEILQQTQEILEFAAQKIGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAFDEEDLLENPELAEMMSEFDAYIGELFISIDKAYEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|300741538|ref|ZP_07071559.1| putative metalloprotease [Rothia dentocariosa M567]
 gi|300380723|gb|EFJ77285.1| putative metalloprotease [Rothia dentocariosa M567]
          Length = 173

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 10/168 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISK------GYFVKENIVELSLVFTDSHR 66
           L   VE+           L    FA   + ++S                 LS+      +
Sbjct: 4   LDFHVEDPNEKPGNVTTQLVHDAFASVDTEVLSNLVDYIFAKLFISKDTYLSIAVVGEKQ 63

Query: 67  IETLNFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           +E ++ E+  +   T+V+SFP       + D  +  MLGDIVL   +   +    G    
Sbjct: 64  MEKIHLEWMDLPGATDVMSFPMDELVPGTEDELAQGMLGDIVLCPSVAARQGADAGHSTL 123

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
           + L  L  HG LH LGYDH   ++   M GL+RS+LE  LG   P E 
Sbjct: 124 DELCLLTTHGILHCLGYDHGTAQEEAEMFGLQRSLLEGFLGRAAPVET 171


>gi|319440586|ref|ZP_07989742.1| metal-binding heat shock protein [Corynebacterium variabile DSM
           44702]
          Length = 183

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-------GCSSLMLGDIV 105
           +  ELS+   D   I  L+  +  +  PT+V+SFP    +              +LGDI+
Sbjct: 34  SSAELSIHIVDLETIADLHVRWLDLPGPTDVMSFPMDELTPGWGRKDGPPPGPGVLGDIM 93

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  +  + +A+  G    + L  L +HG LHLLG+DHV  ++   M  L+  IL + 
Sbjct: 94  LCPDFAQGQADKAGHPLAHELDLLTVHGVLHLLGFDHVVPEEEQRMFALQNEILANW 150


>gi|332367329|gb|EGJ45064.1| metalloprotease [Streptococcus sanguinis SK1059]
          Length = 165

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKEKKEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|325687313|gb|EGD29335.1| metalloprotease [Streptococcus sanguinis SK72]
          Length = 165

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKENKEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLDDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|195978546|ref|YP_002123790.1| putative metalloprotease [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|226701650|sp|B4U460|RRMF_STREM RecName: Full=Probable rRNA maturation factor
 gi|195975251|gb|ACG62777.1| putative metal-dependent hydrolase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 165

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS--- 85
           + + + +  + +  L      + +   E+++ F  + R   LN EYR  D+PT+V+S   
Sbjct: 10  KQVSQEMMEQTIDLLNFAAKTIGKEDKEMAVTFVTNDRSHALNLEYRDTDRPTDVISLEY 69

Query: 86  -------FPTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLII 131
                  F       D   + ML       G++ ++ +    +A   G  FE  +  L +
Sbjct: 70  KPELPIAFSQEDLELDPDLAGMLQEFDAYIGELFISVDKAHEQAEAYGHSFEREMGFLAV 129

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 130 HGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 163


>gi|327474676|gb|EGF20081.1| metalloprotease [Streptococcus sanguinis SK408]
          Length = 165

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKENKEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|225870933|ref|YP_002746880.1| hypothetical protein SEQ_1635 [Streptococcus equi subsp. equi 4047]
 gi|225700337|emb|CAW94643.1| conserved hypothetical protein [Streptococcus equi subsp. equi
           4047]
          Length = 181

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 17/154 (11%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-- 86
           + + + +  + +  L      + +   E+++ F  + R   LN EYR  D+PT+V+S   
Sbjct: 26  KQVSQEMMEQTIDLLNFAAKTIGKEDKEMAVTFVTNDRSHALNLEYRDTDRPTDVISLEY 85

Query: 87  ----PTAFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLII 131
               P AF+  D      L           G++ ++ +    +A   G  FE  +  L +
Sbjct: 86  KPELPIAFSQEDLELDPDLAGMIQEFDAYIGELFISVDKAHEQAEAYGHSFEREMGFLAV 145

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 146 HGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 179


>gi|125718418|ref|YP_001035551.1| metalloprotease [Streptococcus sanguinis SK36]
 gi|166231428|sp|A3CP96|RRMF_STRSV RecName: Full=Probable rRNA maturation factor
 gi|125498335|gb|ABN45001.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
          Length = 165

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKENKEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|327460959|gb|EGF07292.1| metalloprotease [Streptococcus sanguinis SK1057]
          Length = 165

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + + +  +    L        ++  E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSKEILKQTQEILEFAAQKTGKDNKEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|148240663|ref|YP_001226050.1| metal-dependent hydrolase [Synechococcus sp. WH 7803]
 gi|147849202|emb|CAK24753.1| Predicted metal-dependent hydrolase [Synechococcus sp. WH 7803]
          Length = 200

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 4/139 (2%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            L    E +    V   + +    +E  + L L FT    I  LN  +RG+ +PT+VLSF
Sbjct: 44  DLCRWLETLRENRVDPTVPELTACEE--ISLGLQFTGDQEIAELNGRWRGLPQPTDVLSF 101

Query: 87  PTAFASSD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
               +       ++L LGDIV++      +A   G   E  L  L+ HG LHLLG+DH D
Sbjct: 102 AALESEMPLQQTTTLELGDIVVSVPTAARQALEQGHSLERELQWLVSHGLLHLLGWDHPD 161

Query: 145 DKDACVMEGLERSILEDLG 163
           +     M   +  +L   G
Sbjct: 162 EPTLNAMIACQERLLAMAG 180


>gi|293365234|ref|ZP_06611951.1| metalloprotease [Streptococcus oralis ATCC 35037]
 gi|307703773|ref|ZP_07640714.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus oralis ATCC 35037]
 gi|315612996|ref|ZP_07887907.1| metalloprotease [Streptococcus sanguinis ATCC 49296]
 gi|291316684|gb|EFE57120.1| metalloprotease [Streptococcus oralis ATCC 35037]
 gi|307622608|gb|EFO01604.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus oralis ATCC 35037]
 gi|315315106|gb|EFU63147.1| metalloprotease [Streptococcus sanguinis ATCC 49296]
          Length = 165

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSQEILQQTQEILEFAAQKIGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|324993801|gb|EGC25720.1| metalloprotease [Streptococcus sanguinis SK405]
 gi|324994880|gb|EGC26793.1| metalloprotease [Streptococcus sanguinis SK678]
 gi|327463075|gb|EGF09396.1| metalloprotease [Streptococcus sanguinis SK1]
 gi|327490234|gb|EGF22022.1| metalloprotease [Streptococcus sanguinis SK1058]
          Length = 165

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKEKKEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDVSVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|322374472|ref|ZP_08048986.1| putative metalloprotease [Streptococcus sp. C300]
 gi|321279972|gb|EFX57011.1| putative metalloprotease [Streptococcus sp. C300]
          Length = 165

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSQEILQQTQEILEFAAQKIGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAKEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEETEMFGLQEEILTAYGLT 163


>gi|332358727|gb|EGJ36550.1| metalloprotease [Streptococcus sanguinis SK355]
          Length = 165

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKEKKEMAVTFVSNDRSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|145558832|sp|Q475N9|RRMF_CUPPJ RecName: Full=Probable rRNA maturation factor
          Length = 201

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/135 (37%), Positives = 67/135 (49%), Gaps = 7/135 (5%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
            K +   ++   +       L++ F D      LN  YRG D  TNVL+F  A +  D  
Sbjct: 68  RKQIETWVTSALYADAA---LTVRFVDEEEGRALNRSYRGKDYATNVLTFAYAESEDDPV 124

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +    GDIVL   ++E EA    K  E H  HLI+HG LH  GY+H DD +A  ME +E 
Sbjct: 125 T----GDIVLCCPVVETEAREQRKPLEAHYAHLIVHGVLHAQGYEHEDDAEAEEMEAIET 180

Query: 157 SILEDLGINDPYEVD 171
             L+ LG  DPY  D
Sbjct: 181 ETLQALGFEDPYRDD 195


>gi|330893093|gb|EGH25754.1| metal-binding heat shock protein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 114

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 14/126 (11%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            LDLQIA E +   DE   R  CE+   +  ++             EL++   D +    
Sbjct: 3   ELDLQIASETSA-PDEARFRLWCEMGLRQRSAD------------SELTIRLVDENEGRE 49

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN  +R  +  TNVLSFP A    D     +LGD+V+   ++  EA   GK  + H  H+
Sbjct: 50  LNHTWRHKNYATNVLSFP-ADVPDDMLDIPLLGDLVICVPVVNREAAEQGKSVDAHWAHM 108

Query: 130 IIHGFL 135
           +IHG L
Sbjct: 109 VIHGCL 114


>gi|251772247|gb|EES52817.1| conserved protein of unknown function [Leptospirillum
           ferrodiazotrophum]
          Length = 180

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 2/110 (1%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           V ++  +LSLV  +  R+  LN  YRG    T+VLSF     S        LG+IV++  
Sbjct: 30  VGQDHCDLSLVLVNDKRMRELNRTYRGKPSTTDVLSFEGPPGSPPRM-PRFLGEIVISVP 88

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSI 158
               +A   G   E+ L +L+IHG  HLLG+DH   ++D  +M+  E  I
Sbjct: 89  RAHRQAMTAGLSPEDELSNLLIHGVCHLLGFDHERGEEDQRIMKAEEEKI 138


>gi|262282706|ref|ZP_06060474.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262261997|gb|EEY80695.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 165

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E     +EI  +T   + FA              +   E+++ F  + R   L
Sbjct: 1   MYIEIVDETGQVSEEIIKQTQDILEFA---------AQKTGKEKKEMAVTFVTNERSYEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLML-----------------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S               L                 G++ ++ +    
Sbjct: 52  NLEYRDTDRPTDVISLEYKPELDIAIDEEDLLNHPELAEMLDDFDAYIGELFISVDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 112 QAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|306825400|ref|ZP_07458740.1| probable metalloprotease [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432338|gb|EFM35314.1| probable metalloprotease [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 165

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSQEILQQTQEILEFAAQKIGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSL-----------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +             +G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAFDEEDLLENPEFAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|15828849|ref|NP_326209.1| hypothetical protein MYPU_3780 [Mycoplasma pulmonis UAB CTIP]
 gi|46577539|sp|Q98QI3|RRMF_MYCPU RecName: Full=Probable rRNA maturation factor
 gi|14089792|emb|CAC13551.1| conserved hypothetical protein [Mycoplasma pulmonis]
          Length = 149

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 3/142 (2%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           ++ + R + +  F K +   I +  F  +  + + L+ TD+  +   N  YR +DK T+V
Sbjct: 8   NKSNFRFMYKKEFLKIMD--IIQEKFNFKKRISVDLLITDNKEVRENNLLYRNVDKETDV 65

Query: 84  LSFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           LSFP       D    + LG I++++E I  +A       +    +L  H  LHLLGYDH
Sbjct: 66  LSFPFGDPDFFDHLDFIPLGSIIISHEKIVAQALEFNHSKKREFCYLFTHSLLHLLGYDH 125

Query: 143 VDDKDACVMEGLERSILEDLGI 164
            ++ +  +M    + I+E L I
Sbjct: 126 KEEDEEKIMNQYTKEIVEKLNI 147


>gi|324991447|gb|EGC23380.1| metalloprotease [Streptococcus sanguinis SK353]
          Length = 165

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKENKEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAREQAEEFGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|206900820|ref|YP_002251042.1| hypothetical protein DICTH_1213 [Dictyoglomus thermophilum H-6-12]
 gi|206739923|gb|ACI18981.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
          Length = 142

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           K     + K   +  N  ++S+VF ++ +I  LN +YR  D PT+VLSF           
Sbjct: 21  KNFVKEVLKKKGLLPNKYDISVVFVNNEKIRELNSKYRKKDVPTDVLSFSL----GKDPK 76

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             ++G+I ++ +   +++    K   + +  L +HG LH+LGYDH  ++D   ME  E  
Sbjct: 77  GRIIGEIYISIDTARVQSEENNKNLIDEVAFLTLHGLLHILGYDHEKEEDYREME-KETK 135

Query: 158 ILEDL 162
            L  L
Sbjct: 136 NLISL 140


>gi|293363549|ref|ZP_06610305.1| metalloprotein, YbeY family [Mycoplasma alligatoris A21JP2]
 gi|292552898|gb|EFF41652.1| metalloprotein, YbeY family [Mycoplasma alligatoris A21JP2]
          Length = 158

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 3/131 (2%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-SD 94
           F K ++NL  K +F  +  V + + F ++ ++  LN+++RG D PT++LSF    +  ++
Sbjct: 26  FEKILTNL--KTFFSIDKPVMVDVCFVNNDQMRKLNWKHRGKDYPTDILSFGFEDSLINE 83

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
               L LG++V++ + ++ +A       +    +L  HG +HL+GYDH  + +   M  +
Sbjct: 84  QLPFLHLGELVISVDKVKEQALEFNHSEKREYCYLFTHGLVHLMGYDHELENERIHMNNM 143

Query: 155 ERSILEDLGIN 165
              I   L I 
Sbjct: 144 VEEIFSPLNIT 154


>gi|157412539|ref|YP_001483405.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9215]
 gi|166980256|sp|A8G2I8|RRMF_PROM2 RecName: Full=Probable rRNA maturation factor
 gi|157387114|gb|ABV49819.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9215]
          Length = 179

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 5/149 (3%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +  E+  W  E    +   ++  K    L    Y  ++    L L    +  I +LN ++
Sbjct: 34  LIFESIFW--EKVFLSWINIILKKKDYEL--PNYISEKKSFSLGLRIISNQEIASLNKKW 89

Query: 75  RGIDKPTNVLSFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
              + PT+VLSFP     S +    + LGDI ++ E+   ++          ++ L  HG
Sbjct: 90  MQKNGPTDVLSFPIISDESLNNLDHIELGDIFISLEMALEQSYEYKHTIYREMIWLASHG 149

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDL 162
           FLHLLG++H ++ D   M  L+  ++  L
Sbjct: 150 FLHLLGWEHNNENDLENMLNLQEYLITRL 178


>gi|237753148|ref|ZP_04583628.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375415|gb|EEO25506.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 146

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 11/132 (8%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           + F  ++   I K   +++   EL  +F ++ +I+ LN E+RGIDKPT+VLSFP  F   
Sbjct: 17  LAFLDSIFLEILKDLGLQDKQCEL--LFVENAKIQALNLEFRGIDKPTDVLSFPLEF--- 71

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
               SL+LG IV++ E     A  LG    + +  L IHG LHLLG+DH  + D      
Sbjct: 72  ----SLLLGSIVISVEFASKIAQELGHSLNDEIALLFIHGVLHLLGFDH--EVDNGEHRE 125

Query: 154 LERSILEDLGIN 165
            ER I+E  G+ 
Sbjct: 126 RERKIVEKFGLP 137


>gi|269958362|ref|YP_003328149.1| hypothetical protein ACIS_00135 [Anaplasma centrale str. Israel]
 gi|269848191|gb|ACZ48835.1| hypothetical protein ACIS_00135 [Anaplasma centrale str. Israel]
          Length = 154

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 4/132 (3%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
           AK V  L      + +   ++ +V  +   +  LN +YRGI K TNVLSF     S   C
Sbjct: 22  AKRVIGLCLSELDITKYDPKVFVVLANDALLLELNSQYRGIHKATNVLSFSYEKLSPGCC 81

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
               LG+I L+ E I  E+  +     +H  H++IHG LH+LGYDH + ++A  M+ LE 
Sbjct: 82  ----LGEIYLSMERIAEESLEMDVAVRSHFFHMLIHGMLHILGYDHEEPEEATTMQALEV 137

Query: 157 SILEDLGINDPY 168
            +L  LGI +PY
Sbjct: 138 GLLAKLGIRNPY 149


>gi|257068880|ref|YP_003155135.1| hypothetical protein Bfae_17240 [Brachybacterium faecium DSM 4810]
 gi|256559698|gb|ACU85545.1| conserved hypothetical protein TIGR00043 [Brachybacterium faecium
           DSM 4810]
          Length = 153

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E     DE     L   VF                   E+S++F D   +E L
Sbjct: 1   MTIEIRNETTTVVDEREFIELARFVFEAM----------HLHPATEMSILFVDEAAMEKL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++  +  PT+V+SFP                +LGD+VL   +   +A   G      +
Sbjct: 51  HVQWLDLPGPTDVMSFPMDELIPGTPQQPAPEGLLGDVVLCPSVAAAQAAEAGHSPVEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L +H  LHLLGYDH+++ +   M  L+R +L
Sbjct: 111 LLLTVHSILHLLGYDHMEEDERTEMFDLQRKLL 143


>gi|262195532|ref|YP_003266741.1| hypothetical protein Hoch_2305 [Haliangium ochraceum DSM 14365]
 gi|262078879|gb|ACY14848.1| protein of unknown function UPF0054 [Haliangium ochraceum DSM
           14365]
          Length = 172

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 13/124 (10%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDI 104
               +E+SL  TD   I  LN +YRG D PT+VL+F       +G   L       LGD+
Sbjct: 39  PPRPLEVSLRLTDDDEIRALNRDYRGKDTPTDVLAFAMREGPQEGMPPLAAGEAEYLGDL 98

Query: 105 VLAYEIIEIE-ANVLGK------EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           +++      + A                L+ L  HG  HLLGYDH DD +   M      
Sbjct: 99  IISVPTAAQQLARKRPMDVPEREPLLAELLFLSAHGLCHLLGYDHQDDAEEAEMNARMAE 158

Query: 158 ILED 161
           +L +
Sbjct: 159 LLAE 162


>gi|308233980|ref|ZP_07664717.1| hypothetical protein AvagD15_02962 [Atopobium vaginae DSM 15829]
 gi|328944011|ref|ZP_08241476.1| hypothetical protein HMPREF0091_10701 [Atopobium vaginae DSM 15829]
 gi|327491980|gb|EGF23754.1| hypothetical protein HMPREF0091_10701 [Atopobium vaginae DSM 15829]
          Length = 168

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC---SSLMLGDIVLAY 108
           +    +S+       I TLN  +R  D+PT+V+S                  LGDIVLA 
Sbjct: 37  KRPCNVSISIVTDEHIHTLNKTWRNQDRPTDVISLECERPDDPDLANGEVCELGDIVLAP 96

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
             I  +A+      E+    L+IHG LHLLGYDH+ D +A VME LE  +L ++G
Sbjct: 97  NYIAHQADSFHMAHEDECRLLLIHGMLHLLGYDHLTDDEAEVMEALEDRLLLEVG 151


>gi|323351168|ref|ZP_08086824.1| metalloprotease [Streptococcus sanguinis VMC66]
 gi|322122392|gb|EFX94103.1| metalloprotease [Streptococcus sanguinis VMC66]
 gi|327470589|gb|EGF16045.1| metalloprotease [Streptococcus sanguinis SK330]
          Length = 165

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKENKEMAVTFVSNARSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELVEMLEDFDAYIGELFISVDKAREQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTSEEEAEMFGLQEEILTAYGLT 163


>gi|297822029|ref|XP_002878897.1| hypothetical protein ARALYDRAFT_901259 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324736|gb|EFH55156.1| hypothetical protein ARALYDRAFT_901259 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 584

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 18/150 (12%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEV-------VFAKAVSNLISKGYFVKE---------N 53
            L + I +E  L  D++ ++ + E+           A + L    Y  +E          
Sbjct: 104 ELSVSICIEEQL-PDDLEIQNIAEMLRLNVPMAMTLAFNGLKDSKYKTRETDIEDLGGYE 162

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
            VELS++  +   I  LN E+RG D  T+VLS             LM+GDIV++ E    
Sbjct: 163 TVELSVMLCNDDFICKLNKEWRGEDHATDVLSMSQHVPEL-KLPVLMMGDIVISVETAAR 221

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +A   G    + +  L+IHG LHLLG+DH 
Sbjct: 222 QAAERGHTLLDEIRILVIHGLLHLLGFDHE 251


>gi|332358998|gb|EGJ36819.1| metalloprotease [Streptococcus sanguinis SK49]
          Length = 165

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + E +  +    L        +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEEILKQTQEILEFAAQKTGKEKKEMAVTFVSNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 90  FASSDGCSSLML-----------------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                      L                 G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAVDEEDLLDHPELAEMLEDFDAYIGELFISVDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|331266550|ref|YP_004326180.1| putative metalloprotease [Streptococcus oralis Uo5]
 gi|326683222|emb|CBZ00840.1| putative metalloprotease [Streptococcus oralis Uo5]
          Length = 165

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSQEILHQTQEILEFAAQKIGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDIAFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|255994494|ref|ZP_05427629.1| putative metalloprotease [Eubacterium saphenum ATCC 49989]
 gi|255993207|gb|EEU03296.1| putative metalloprotease [Eubacterium saphenum ATCC 49989]
          Length = 178

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 10/121 (8%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG----------CSSLML 101
           ++ +E+S+ F     I+ LN +YRG D  T+VLSFP      +           C  +ML
Sbjct: 56  KDRIEVSVSFVSEDSIKQLNLDYRGKDSITDVLSFPMISTREEFNPEYDVDLGFCDKIML 115

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GD+V+       +A  +G+     +V+L IH  LHLLG DH+D+ D  +M   E+ +++ 
Sbjct: 116 GDVVICLARASKQAADIGQSLSREVVYLFIHSVLHLLGMDHIDEADKEMMRSFEKKVVKK 175

Query: 162 L 162
           L
Sbjct: 176 L 176


>gi|33239659|ref|NP_874601.1| metal-dependent hydrolase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|46577394|sp|Q7VE08|RRMF_PROMA RecName: Full=Probable rRNA maturation factor
 gi|33237184|gb|AAP99253.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 195

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + + ++   W + I   +  + +  +   NL       K     + L+FT+   I  +N 
Sbjct: 36  IDLIMDCDTWRNSI--VSWFDCILMQ--PNLTCPQIVRKNRFFSMGLLFTNDLSIRQMNK 91

Query: 73  EYRGIDKPTNVLSFPTAFAS--SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           E+R  D+ T+VLSFP             L LGDI+++ E    +A +      + L  L+
Sbjct: 92  EWRKKDESTDVLSFPAIDEHIVLPPNQFLELGDIIVSVETAFKQAKIHNHSLMHELRWLV 151

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            HGFLHLLG+DH        M   +  +L+
Sbjct: 152 SHGFLHLLGWDHPSSASLNEMLSFQELLLK 181


>gi|15902913|ref|NP_358463.1| putative metalloprotease [Streptococcus pneumoniae R6]
 gi|116516344|ref|YP_816337.1| putative metalloprotease [Streptococcus pneumoniae D39]
 gi|148984709|ref|ZP_01817977.1| hypothetical protein CGSSp3BS71_01657 [Streptococcus pneumoniae
           SP3-BS71]
 gi|148988410|ref|ZP_01819857.1| hypothetical protein CGSSp6BS73_06270 [Streptococcus pneumoniae
           SP6-BS73]
 gi|149002518|ref|ZP_01827452.1| hypothetical protein CGSSp14BS69_12356 [Streptococcus pneumoniae
           SP14-BS69]
 gi|168483036|ref|ZP_02707988.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|168485919|ref|ZP_02710427.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|168491056|ref|ZP_02715199.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|168494396|ref|ZP_02718539.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|169833180|ref|YP_001694412.1| putative metalloprotease [Streptococcus pneumoniae Hungary19A-6]
 gi|221231730|ref|YP_002510882.1| hypothetical protein SPN23F_08920 [Streptococcus pneumoniae ATCC
           700669]
 gi|225854471|ref|YP_002735983.1| putative metalloprotease [Streptococcus pneumoniae JJA]
 gi|225856625|ref|YP_002738136.1| putative metalloprotease [Streptococcus pneumoniae P1031]
 gi|225858760|ref|YP_002740270.1| putative metalloprotease [Streptococcus pneumoniae 70585]
 gi|225861146|ref|YP_002742655.1| putative metalloprotease [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650884|ref|ZP_04525136.1| putative metalloprotease [Streptococcus pneumoniae CCRI 1974]
 gi|237821334|ref|ZP_04597179.1| putative metalloprotease [Streptococcus pneumoniae CCRI 1974M2]
 gi|289167811|ref|YP_003446080.1| hypothetical protein smi_0968 [Streptococcus mitis B6]
 gi|298229557|ref|ZP_06963238.1| putative metalloprotease [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254474|ref|ZP_06978060.1| putative metalloprotease [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503023|ref|YP_003724963.1| metalloprotease [Streptococcus pneumoniae TCH8431/19A]
 gi|303254434|ref|ZP_07340540.1| putative metalloprotease [Streptococcus pneumoniae BS455]
 gi|307127482|ref|YP_003879513.1| hypothetical protein SP670_1352 [Streptococcus pneumoniae 670-6B]
 gi|307704697|ref|ZP_07641596.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK597]
 gi|307706465|ref|ZP_07643274.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK321]
 gi|307708602|ref|ZP_07645066.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|307709147|ref|ZP_07645606.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK564]
 gi|29428192|sp|Q8DQ35|RRMF_STRR6 RecName: Full=Probable rRNA maturation factor
 gi|122278777|sp|Q04KW1|RRMF_STRP2 RecName: Full=Probable rRNA maturation factor
 gi|238688290|sp|B1IBC7|RRMF_STRPI RecName: Full=Probable rRNA maturation factor
 gi|254799900|sp|C1C6U4|RRMF_STRP7 RecName: Full=Probable rRNA maturation factor
 gi|254799998|sp|C1CRT3|RRMF_STRZT RecName: Full=Probable rRNA maturation factor
 gi|254807259|sp|B8ZP64|RRMF_STRPJ RecName: Full=Probable rRNA maturation factor
 gi|254807268|sp|C1CDW2|RRMF_STRZJ RecName: Full=Probable rRNA maturation factor
 gi|254807292|sp|C1CK48|RRMF_STRZP RecName: Full=Probable rRNA maturation factor
 gi|15458473|gb|AAK99673.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116076920|gb|ABJ54640.1| conserved hypothetical protein TIGR00043 [Streptococcus pneumoniae
           D39]
 gi|147759455|gb|EDK66447.1| hypothetical protein CGSSp14BS69_12356 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147923100|gb|EDK74215.1| hypothetical protein CGSSp3BS71_01657 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147926091|gb|EDK77165.1| hypothetical protein CGSSp6BS73_06270 [Streptococcus pneumoniae
           SP6-BS73]
 gi|168995682|gb|ACA36294.1| conserved hypothetical protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172043366|gb|EDT51412.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|183571014|gb|EDT91542.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|183574714|gb|EDT95242.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|183575625|gb|EDT96153.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|220674190|emb|CAR68718.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225721312|gb|ACO17166.1| conserved hypothetical protein [Streptococcus pneumoniae 70585]
 gi|225722204|gb|ACO18057.1| conserved hypothetical protein [Streptococcus pneumoniae JJA]
 gi|225724973|gb|ACO20825.1| conserved hypothetical protein [Streptococcus pneumoniae P1031]
 gi|225727792|gb|ACO23643.1| conserved hypothetical protein [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|288907378|emb|CBJ22215.1| conserved hypothetical protein [Streptococcus mitis B6]
 gi|298238618|gb|ADI69749.1| metalloprotease [Streptococcus pneumoniae TCH8431/19A]
 gi|301799943|emb|CBW32526.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
 gi|302598601|gb|EFL65641.1| putative metalloprotease [Streptococcus pneumoniae BS455]
 gi|306484544|gb|ADM91413.1| conserved hypothetical protein [Streptococcus pneumoniae 670-6B]
 gi|307615351|gb|EFN94560.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|307618175|gb|EFN97333.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK321]
 gi|307620093|gb|EFN99210.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK564]
 gi|307621744|gb|EFO00782.1| uncharacterized protein family UPF0054 family protein
           [Streptococcus mitis SK597]
 gi|327389245|gb|EGE87590.1| hypothetical protein SPAR5_0931 [Streptococcus pneumoniae GA04375]
 gi|332076241|gb|EGI86707.1| hypothetical protein SPAR68_0966 [Streptococcus pneumoniae GA41301]
 gi|332201433|gb|EGJ15503.1| hypothetical protein SPAR93_1028 [Streptococcus pneumoniae GA47368]
          Length = 165

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSKEMLQQTQEILEFAAQKLGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEIAFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|228478259|ref|ZP_04062867.1| conserved hypothetical protein [Streptococcus salivarius SK126]
 gi|228249938|gb|EEK09208.1| conserved hypothetical protein [Streptococcus salivarius SK126]
          Length = 165

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + E +  + +  L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSEKLKEQTLELLDFAAQRLGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                +F   +   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDISFDEEELAENPELAEMMGEFDSYIGELFISVDKAHEQAEDYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|238544550|dbj|BAH60902.1| hyphothetical protein [Desulfotignum balticum]
          Length = 140

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+V  D  +I+ LN  +RGID+PTNVLSFP         +  +LGD+V++ +    EA
Sbjct: 24  EISIVIMDDLQIKELNHSFRGIDRPTNVLSFPMQEGEFSDITPGLLGDVVISAQTAAREA 83

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILE 160
              G   +  +  L+IHG LHL+G+DH   K DA  ME     +L 
Sbjct: 84  QEAGITLDERMSQLLIHGILHLVGFDHETSKADADDMETKSCELLR 129


>gi|318040668|ref|ZP_07972624.1| metal-dependent hydrolase [Synechococcus sp. CB0101]
          Length = 189

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 14/138 (10%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------- 86
              +  + L ++   ++     L L       I  LN ++RG   PT+VL+F        
Sbjct: 51  WLEQMAAELPAE---LQAPAYSLGLSLVGDAEIAELNGDWRGKSGPTDVLAFAAQDDGLD 107

Query: 87  ---PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
              P      +G  +L LGDIV++ E    +A   G      L  L  HG LHLLG+DH 
Sbjct: 108 DAPPIPMPDDEGEEALELGDIVISLETAARQAPEHGHSLVEELQFLATHGLLHLLGWDHP 167

Query: 144 DDKDACVMEGLERSILED 161
           DD    +M   +  +L +
Sbjct: 168 DDASLALMLARQERLLAN 185


>gi|326791149|ref|YP_004308970.1| metalloprotease ybeY [Clostridium lentocellum DSM 5427]
 gi|326541913|gb|ADZ83772.1| metalloprotease ybeY [Clostridium lentocellum DSM 5427]
          Length = 166

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---------------- 95
              VE+SL   D   I  +N E+R ID+PT+VLSFP       G                
Sbjct: 36  PYEVEVSLTVVDLDAIHEINKEHREIDRPTDVLSFPQIDTEYIGHINWDTLDTASCVNYD 95

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
              ++LGDI+L  +  + +AN  G      +  L+ H   HLLGYDH+ ++D   M   +
Sbjct: 96  TEEVILGDIILCADKAKEQANNYGHSLTREVCFLVAHSMFHLLGYDHMTEEDEKTMVRKQ 155

Query: 156 RSILEDLGI 164
            S+L+ L I
Sbjct: 156 ESVLQCLSI 164


>gi|296393920|ref|YP_003658804.1| hypothetical protein Srot_1510 [Segniliparus rotundus DSM 44985]
 gi|296181067|gb|ADG97973.1| protein of unknown function UPF0054 [Segniliparus rotundus DSM
           44985]
          Length = 180

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++++ E+ L   E  L  + +    +   N             ELS++  D+  +  L
Sbjct: 1   MSVELSNESGLSAPEGMLIHVAQFALDQMRVN----------PAAELSMLLVDTTTMAHL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSL------MLGDIVLAYEIIEIEANVLGKEFEN 124
           + ++  +  PT+VLSFP   A  DG          +LGDIVL  E+   +A   G   E+
Sbjct: 51  HQQWMNLPGPTDVLSFPMDDAEPDGRPDAVEAAQTLLGDIVLCPEVAAEQAEAAGHSAEH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            ++ L +HG LH+LGYDH + ++   M  L+  +++  
Sbjct: 111 EMIVLTVHGVLHILGYDHAEPEEEAEMFALQGKLVDRW 148


>gi|68171524|ref|ZP_00544904.1| Protein of unknown function UPF0054 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658303|ref|YP_507939.1| hypothetical protein ECH_1155 [Ehrlichia chaffeensis str. Arkansas]
 gi|123492551|sp|Q2GF44|RRMF_EHRCR RecName: Full=Probable rRNA maturation factor
 gi|67999052|gb|EAM85723.1| Protein of unknown function UPF0054 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599760|gb|ABD45229.1| conserved hypothetical protein TIGR00043 [Ehrlichia chaffeensis
           str. Arkansas]
          Length = 154

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K + N       + E    +S+V  ++  ++ LN+EYR  +KPTNVLSFP    +   
Sbjct: 21  FIKKIINTSLIDLNIYEYKPTISVVLANNRLLQKLNYEYRKKNKPTNVLSFPYNKLN--- 77

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                LG+I ++ + +  E+  L    E+H  H++IHG LH+L Y+H +  +  +ME +E
Sbjct: 78  -KYCYLGEIFVSLDTLINESTDLNIPIEHHTSHMLIHGLLHILDYNHEEPLEQYIMESIE 136

Query: 156 RSILEDLGINDPY 168
             +L+ LGI +PY
Sbjct: 137 IKLLDKLGIKNPY 149


>gi|322376462|ref|ZP_08050955.1| putative metalloprotease [Streptococcus sp. M334]
 gi|321282269|gb|EFX59276.1| putative metalloprotease [Streptococcus sp. M334]
          Length = 165

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSKEMLQQTQEILEFAAQKLGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                +F   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEISFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|148998597|ref|ZP_01826037.1| hypothetical protein CGSSp11BS70_06353 [Streptococcus pneumoniae
           SP11-BS70]
 gi|149006356|ref|ZP_01830068.1| hypothetical protein CGSSp18BS74_03564 [Streptococcus pneumoniae
           SP18-BS74]
 gi|168575629|ref|ZP_02721565.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|307067624|ref|YP_003876590.1| putative metal-dependent hydrolase [Streptococcus pneumoniae AP200]
 gi|147755595|gb|EDK62642.1| hypothetical protein CGSSp11BS70_06353 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147762133|gb|EDK69095.1| hypothetical protein CGSSp18BS74_03564 [Streptococcus pneumoniae
           SP18-BS74]
 gi|183578494|gb|EDT99022.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|306409161|gb|ADM84588.1| Predicted metal-dependent hydrolase [Streptococcus pneumoniae
           AP200]
 gi|332075583|gb|EGI86051.1| hypothetical protein SPAR148_0923 [Streptococcus pneumoniae
           GA17545]
 gi|332202822|gb|EGJ16891.1| hypothetical protein SPAR69_0936 [Streptococcus pneumoniae GA41317]
          Length = 165

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSKEMLQQTQEILEFAAKKLGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEIAFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|15900844|ref|NP_345448.1| putative metalloprotease [Streptococcus pneumoniae TIGR4]
 gi|111657971|ref|ZP_01408678.1| hypothetical protein SpneT_02000860 [Streptococcus pneumoniae
           TIGR4]
 gi|149010387|ref|ZP_01831758.1| hypothetical protein CGSSp19BS75_03512 [Streptococcus pneumoniae
           SP19-BS75]
 gi|182683913|ref|YP_001835660.1| hypothetical protein SPCG_0943 [Streptococcus pneumoniae CGSP14]
 gi|303259879|ref|ZP_07345854.1| hypothetical protein CGSSp9vBS293_10008 [Streptococcus pneumoniae
           SP-BS293]
 gi|303262293|ref|ZP_07348237.1| hypothetical protein CGSSp14BS292_01338 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264715|ref|ZP_07350633.1| hypothetical protein CGSSpBS397_06729 [Streptococcus pneumoniae
           BS397]
 gi|303267322|ref|ZP_07353182.1| hypothetical protein CGSSpBS457_11366 [Streptococcus pneumoniae
           BS457]
 gi|303269127|ref|ZP_07354906.1| hypothetical protein CGSSpBS458_03184 [Streptococcus pneumoniae
           BS458]
 gi|29428248|sp|Q97R63|RRMF_STRPN RecName: Full=Probable rRNA maturation factor
 gi|238691155|sp|B2IPC1|RRMF_STRPS RecName: Full=Probable rRNA maturation factor
 gi|14972442|gb|AAK75088.1| conserved hypothetical protein TIGR00043 [Streptococcus pneumoniae
           TIGR4]
 gi|147764868|gb|EDK71797.1| hypothetical protein CGSSp19BS75_03512 [Streptococcus pneumoniae
           SP19-BS75]
 gi|182629247|gb|ACB90195.1| hypothetical protein SPCG_0943 [Streptococcus pneumoniae CGSP14]
 gi|301801810|emb|CBW34521.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302636616|gb|EFL67107.1| hypothetical protein CGSSp14BS292_01338 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639084|gb|EFL69544.1| hypothetical protein CGSSpBS293_10008 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641314|gb|EFL71682.1| hypothetical protein CGSSpBS458_03184 [Streptococcus pneumoniae
           BS458]
 gi|302643132|gb|EFL73419.1| hypothetical protein CGSSpBS457_11366 [Streptococcus pneumoniae
           BS457]
 gi|302645802|gb|EFL76031.1| hypothetical protein CGSSpBS397_06729 [Streptococcus pneumoniae
           BS397]
          Length = 165

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSKEMLQQTQEILEFAAQKLGKEDKEMAVTFVTNERSHELNLEYRNTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEIAFDEEDLLENSELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|315223062|ref|ZP_07864941.1| conserved hypothetical protein TIGR00043 [Streptococcus anginosus
           F0211]
 gi|319939222|ref|ZP_08013585.1| metal-dependent hydrolase [Streptococcus anginosus 1_2_62CV]
 gi|315188012|gb|EFU21748.1| conserved hypothetical protein TIGR00043 [Streptococcus anginosus
           F0211]
 gi|319811618|gb|EFW07894.1| metal-dependent hydrolase [Streptococcus anginosus 1_2_62CV]
          Length = 165

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 26/172 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     +EI  +T   + FA            + +   E+++ F  + R   L
Sbjct: 1   MYIEMVDETGQVSEEIIKQTHDILEFAAK---------KIGKEEKEMAVTFVTNERSHEL 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLML-----------------GDIVLAYEIIEI 113
           N EYR  D+PT+V+S               L                 G++ ++ +    
Sbjct: 52  NLEYRNTDRPTDVISLEYKPELDIAIDEEDLLENPELAEMLEDFDAYIGELFISIDKARE 111

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +A   G  FE  +  L +HGFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 112 QAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|71065192|ref|YP_263919.1| hypothetical protein Psyc_0626 [Psychrobacter arcticus 273-4]
 gi|123649317|sp|Q4FU23|RRMF_PSYA2 RecName: Full=Probable rRNA maturation factor
 gi|71038177|gb|AAZ18485.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 206

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAY 108
           +E I  L +  TD      LN E R  D  TN+LS+P+   ++      +L LG++V+ +
Sbjct: 85  QEKIKALDIYITDEDEGRELNLEARQKDYATNILSYPSDLPAAIIGLMPTLPLGELVICH 144

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDP 167
            ++  EA    K    H+ HL++HG LHLLG+DH     +   ME  E  IL  L I +P
Sbjct: 145 AVMVREAAEQNKAAVQHINHLLVHGILHLLGFDHELGQAEQDEMERFEIEILAGLNIPNP 204

Query: 168 Y 168
           Y
Sbjct: 205 Y 205


>gi|56417248|ref|YP_154322.1| hypothetical protein AM1264 [Anaplasma marginale str. St. Maries]
 gi|222475612|ref|YP_002564029.1| hypothetical protein AMF_953 [Anaplasma marginale str. Florida]
 gi|255003605|ref|ZP_05278569.1| hypothetical protein AmarPR_05268 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004734|ref|ZP_05279535.1| hypothetical protein AmarV_05648 [Anaplasma marginale str.
           Virginia]
 gi|62901414|sp|Q5P9G3|RRMF_ANAMM RecName: Full=Probable rRNA maturation factor
 gi|254807282|sp|B9KH69|RRMF_ANAMF RecName: Full=Probable rRNA maturation factor
 gi|56388480|gb|AAV87067.1| hypothetical protein AM1264 [Anaplasma marginale str. St. Maries]
 gi|222419750|gb|ACM49773.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 154

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           +V  +   +  LN +YRGI K TNVLSF     S   C    LG+I L+ E I  E+  +
Sbjct: 44  VVLANDALLLELNSQYRGIHKATNVLSFSYEKLSPGCC----LGEIYLSMERIAEESLEM 99

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
                +H  H++IHG LH+LGYDH + ++A  M+ LE  +L  LGI +PY
Sbjct: 100 DVAVRSHFFHMLIHGMLHILGYDHEEPEEAITMQALEVGLLAKLGIRNPY 149


>gi|116327964|ref|YP_797684.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330845|ref|YP_800563.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281401|sp|Q04TG5|RRMF_LEPBJ RecName: Full=Probable rRNA maturation factor
 gi|122284244|sp|Q052J4|RRMF_LEPBL RecName: Full=Probable rRNA maturation factor
 gi|116120708|gb|ABJ78751.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124534|gb|ABJ75805.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 143

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 15/128 (11%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD--------------G 95
           +K+   EL L+      +  +N   RG DK T+VLSFP  F S+                
Sbjct: 13  LKDFPCELGLLLVGDSDMRKINRLRRGKDKTTDVLSFPLEFDSAPLQNVLQKRTGFDSNS 72

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGL 154
              + LG+IV++ + +E +A  +G   ++    L++HGFLHLLGYDH   +++  +M+  
Sbjct: 73  LPPIALGEIVISVDTLEKQAVEIGHSVKDEFYRLLVHGFLHLLGYDHERGEEEERIMKLK 132

Query: 155 ERSILEDL 162
           E   LE L
Sbjct: 133 EDECLEIL 140


>gi|78778570|ref|YP_396682.1| hypothetical protein PMT9312_0184 [Prochlorococcus marinus str. MIT
           9312]
 gi|123554741|sp|Q31CZ9|RRMF_PROM9 RecName: Full=Probable rRNA maturation factor
 gi|78712069|gb|ABB49246.1| Protein of unknown function UPF0054 [Prochlorococcus marinus str.
           MIT 9312]
          Length = 179

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)

Query: 31  LCEVVFAKAVSNLISKG------YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
             E VF   ++ ++ K       Y  ++    L L    +  I +LN ++   + PT+VL
Sbjct: 40  FWEKVFLSWINTILKKEDYELPYYIFEKKSFSLGLQIISNQEIASLNKKWMQKNGPTDVL 99

Query: 85  SFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           SFP     S +    + LGDI ++ E+   ++          ++ L  HGFLHLLG++H 
Sbjct: 100 SFPIISDESLNNLDQIELGDIFISLEMALEQSYEYKHSIYREMIWLASHGFLHLLGWEHN 159

Query: 144 DDKDACVMEGLERSILEDLG 163
           ++ D   M   +  ++  L 
Sbjct: 160 NEHDLENMLNFQEYLITRLN 179


>gi|257466092|ref|ZP_05630403.1| metal-binding protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917249|ref|ZP_07913489.1| metal-binding protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691124|gb|EFS27959.1| metal-binding protein [Fusobacterium gonidiaformans ATCC 25563]
          Length = 164

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 4/160 (2%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCE---VVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            L ++++VE         ++ + E    V  + +  +++         + +SL+ T + +
Sbjct: 2   ELLVEVSVEYKKNDYAEFIQEITENNNEVLTEYIEEVLTMEKIESTLPLYVSLLLTGNEQ 61

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGKEFENH 125
           I+ +N E+R  D PT+V+SF               LGDIV++ + +  +A      F   
Sbjct: 62  IQGINREFRKKDSPTDVISFAYHENEDFLVGPYDTLGDIVISLDRVGEQAKEYNHSFTRE 121

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             +++ HG LH+LGYDH++++D   M   E  IL   G  
Sbjct: 122 FYYVLTHGILHILGYDHIEEEDKKEMREREEEILGHFGYT 161


>gi|312863688|ref|ZP_07723926.1| translation metalloprotein YbeY [Streptococcus vestibularis F0396]
 gi|322517153|ref|ZP_08070037.1| metalloprotease [Streptococcus vestibularis ATCC 49124]
 gi|311101224|gb|EFQ59429.1| translation metalloprotein YbeY [Streptococcus vestibularis F0396]
 gi|322124303|gb|EFX95814.1| metalloprotease [Streptococcus vestibularis ATCC 49124]
          Length = 145

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 17/137 (12%)

Query: 46  KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AFASSDGCSSL 99
               + +   E+++ F  + R   LN EYR  D+PT+V+S          F   D   + 
Sbjct: 7   AAQKLGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDITFDEEDLAENP 66

Query: 100 ML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            L           G++ ++ +    +A   G  +E  +  L +HGFLH+ GYDH   ++ 
Sbjct: 67  ELAEMMGEFDSYIGELFISIDKAREQAEEYGHSYEREMGFLAVHGFLHINGYDHYTPEEE 126

Query: 149 CVMEGLERSILEDLGIN 165
             M GL+  IL   G+ 
Sbjct: 127 AEMFGLQEEILTAYGLT 143


>gi|257458354|ref|ZP_05623502.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
 gi|257444289|gb|EEV19384.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
          Length = 153

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 2/116 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT--AFASSDGCSSLMLGDIVLAYEIIEI 113
           +LS+VF     I  LN  YR ID PT+VLSF     +   DG      GDIV++ + +  
Sbjct: 37  DLSVVFCKDAFIHELNKTYRHIDSPTDVLSFEQGDEYDDEDGNLRFNAGDIVISLDSLRS 96

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            A          L  L+IHG LHL G DH D+     M  L+  IL        Y+
Sbjct: 97  NAETFNVTMNEELKRLLIHGILHLSGMDHSDNDPQQEMLQLQEKILGSYSGTVIYQ 152


>gi|320538438|ref|ZP_08038305.1| conserved hypothetical protein TIGR00043 [Treponema phagedenis
           F0421]
 gi|320144700|gb|EFW36449.1| conserved hypothetical protein TIGR00043 [Treponema phagedenis
           F0421]
          Length = 156

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 2/130 (1%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA-- 91
           +   K  S L+     ++    +LS+VF +   I TLN  YR ID PT+VLSF       
Sbjct: 19  LWLPKVESFLLKVLERMEIQNWDLSVVFCNDEFIHTLNKTYRHIDSPTDVLSFENGEKYF 78

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
           + DG + ++ GDI+++ + ++  A       +  L  L+IHG LHL G DH D+     M
Sbjct: 79  NEDGEARILAGDIIISLDSVKANAYAFHVSIDEELRRLLIHGVLHLFGMDHTDNSPEQEM 138

Query: 152 EGLERSILED 161
             L+  IL +
Sbjct: 139 LQLQEKILAE 148


>gi|229820243|ref|YP_002881769.1| protein of unknown function UPF0054 [Beutenbergia cavernae DSM
           12333]
 gi|259646478|sp|C5C494|RRMF_BEUC1 RecName: Full=Probable rRNA maturation factor
 gi|229566156|gb|ACQ80007.1| protein of unknown function UPF0054 [Beutenbergia cavernae DSM
           12333]
          Length = 150

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +  +++ E+ +  DE     L   V  +                 ELS++F D   +  L
Sbjct: 1   MSTEVSNESPVTVDEAEFAALARYVLDQ----------LHVHPQAELSILFVDIPAMSDL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           +  +     PT+VLSFP                +LGD+VL  E+   +A   G   E  L
Sbjct: 51  HERWMDEPGPTDVLSFPMDELRPGRDDAPSGPGVLGDVVLCPEVAAEQARTAGHSTEEEL 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLG+DH +  +   M  L+R +L
Sbjct: 111 LLLTTHGILHLLGFDHAEPDEEREMFDLQRKLL 143


>gi|320160837|ref|YP_004174061.1| hypothetical protein ANT_14330 [Anaerolinea thermophila UNI-1]
 gi|319994690|dbj|BAJ63461.1| hypothetical protein ANT_14330 [Anaerolinea thermophila UNI-1]
          Length = 150

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 4/143 (2%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + DE +   + +    +A    +        +  ++++   +   +++LN ++ G + P
Sbjct: 4   FFVDEAYEALVRKEPLIRAAEETLRVEN---HSDSDVTISIQNDEALKSLNAQFMGTEAP 60

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T+VLSF   F   +      LGDI+++YE  E +A   G   EN L+ LI+HG LHL+GY
Sbjct: 61  TDVLSFTMDFFDPE-TERQYLGDILISYERAEEQAQTAGHSTENELILLIVHGILHLVGY 119

Query: 141 DHVDDKDACVMEGLERSILEDLG 163
           DH  +++   M   +  IL+ LG
Sbjct: 120 DHGTEEEKSKMWKTQSEILKQLG 142


>gi|331703461|ref|YP_004400148.1| hypothetical protein MLC_4420 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|256384128|gb|ACU78698.1| putative metalloprotease [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384960|gb|ACU79529.1| putative metalloprotease [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296456005|gb|ADH22240.1| putative metalloprotease [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
 gi|328802016|emb|CBW54170.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 164

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 36  FAKAVSNLISK---GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           F K   N I K    YF     +ELS+ F +  + + +N +YR      +V SFP     
Sbjct: 16  FWKKFCNKILKTAYNYFNFNYDIELSITFVNDLKAQQINQQYRNHSYIADVTSFPVEMTE 75

Query: 93  SD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           ++        LGD+ +     + +A     +  + +  L +HGFLHLLGYDH D  D  +
Sbjct: 76  NEIKAIGFRELGDMFINLSEAKRKAIKYNHDLNSEMGFLFVHGFLHLLGYDHEDLNDEKI 135

Query: 151 MEGLERSILE 160
           M  L+  IL+
Sbjct: 136 MFDLQDQILK 145


>gi|148992898|ref|ZP_01822517.1| hypothetical protein CGSSp9BS68_07482 [Streptococcus pneumoniae
           SP9-BS68]
 gi|149019558|ref|ZP_01834877.1| hypothetical protein CGSSp23BS72_03128 [Streptococcus pneumoniae
           SP23-BS72]
 gi|168490214|ref|ZP_02714413.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|147928350|gb|EDK79366.1| hypothetical protein CGSSp9BS68_07482 [Streptococcus pneumoniae
           SP9-BS68]
 gi|147930933|gb|EDK81913.1| hypothetical protein CGSSp23BS72_03128 [Streptococcus pneumoniae
           SP23-BS72]
 gi|183571419|gb|EDT91947.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|332073300|gb|EGI83779.1| uncharacterized UPF0054 family protein [Streptococcus pneumoniae
           GA17570]
          Length = 165

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSKEMLQQTQEILEFAAQKLGKEDKEMAVTFVTNERSHELNLEYRNTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEIAFDEEDLLENSELAEMMSEFDAYIGELFISSDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|291166726|gb|EFE28772.1| metalloprotease [Filifactor alocis ATCC 35896]
          Length = 162

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 35  VFAKAVSNLISKGYFVKE--NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT---- 88
           VF K +S++I      +      E+SL    + +I  LN  +R ID+ T+VLSFP     
Sbjct: 18  VFQKTLSDIIEYAMETEHLTGDYEVSLSVVSADQIRELNANFRQIDRITDVLSFPMYERE 77

Query: 89  -----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                          + +GDIVL Y+    +A   G   +  + +L+ H   HLLGYDH+
Sbjct: 78  ELDEIEEKKEYEDYEVNIGDIVLCYDRAVEQAKEYGHSLKREICYLVTHSIFHLLGYDHM 137

Query: 144 DDKDACVMEGLERSILEDLGI 164
           ++++  +M   E  +L    I
Sbjct: 138 EEEEKQMMRTREEQVLSHFHI 158


>gi|294155405|ref|YP_003559789.1| conserved hypothetical metalloprotease [Mycoplasma crocodyli MP145]
 gi|291600021|gb|ADE19517.1| conserved hypothetical metalloprotease [Mycoplasma crocodyli MP145]
          Length = 158

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +  + + + NL+   +F  +  +++ + F D+ +I+ LN  YR  D  T++LSF      
Sbjct: 23  KKEYQEILKNLV--KHFNIKKDIQVDVTFVDNKKIKELNKSYRNKDYVTDILSFDFGKID 80

Query: 93  SDG-CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
            +     + LG++V++ + +E ++       +    +L  HG +HL+GYDH  + +   M
Sbjct: 81  FNSKIPFIHLGELVISSQKVEEQSQEFNHSLKREYCYLFAHGLIHLMGYDHELEDERIEM 140

Query: 152 EGLERSILEDLGIN 165
             L  +I   L I 
Sbjct: 141 NKLVDTIFSPLNIT 154


>gi|308535206|ref|YP_002137815.2| hypothetical protein Gbem_0998 [Geobacter bemidjiensis Bem]
 gi|308052551|gb|ACH38019.2| protein of unknown function UPF0054 [Geobacter bemidjiensis Bem]
          Length = 155

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 5/131 (3%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
               K    ++     +     ELS+       I  +N +Y G DK TNV+SF       
Sbjct: 22  TALRKVAQRILDA---LGCPEAELSISIVGDRAIRVINRDYLGRDKATNVISFAMQEGEF 78

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVM 151
              +  +LGD+V++ +    EA   G+ F + L  L++HG LH+ GYDH    + +A  M
Sbjct: 79  GAVNPELLGDVVISVDTAAREAEEAGETFLSRLYFLLMHGILHITGYDHERSGEAEAARM 138

Query: 152 EGLERSILEDL 162
           E  ER I   L
Sbjct: 139 EAKEREIFALL 149


>gi|297571542|ref|YP_003697316.1| hypothetical protein Arch_0975 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931889|gb|ADH92697.1| protein of unknown function UPF0054 [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 170

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 5/141 (3%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            DE       ++     ++  +     V +   +LS+V  D   +  L+ E+  ++ PT+
Sbjct: 5   NDESGFEPAPQLEEISELATWVLDDLRVHQQS-DLSIVMLDEEAMSALHVEWMDLEGPTD 63

Query: 83  VLSFPTAFASSDGCS----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           V+SFP                MLGDI +  ++   +A   G      ++ L  HG LHLL
Sbjct: 64  VMSFPMDELRPTPLGVEPTPGMLGDIAICPQVAARQALAAGHNTMEEILLLTTHGILHLL 123

Query: 139 GYDHVDDKDACVMEGLERSIL 159
           GYDH +  +   M  L+R +L
Sbjct: 124 GYDHAEPDEKKEMFELQRRLL 144


>gi|257452112|ref|ZP_05617411.1| metal-binding protein [Fusobacterium sp. 3_1_5R]
 gi|317058658|ref|ZP_07923143.1| metal-binding protein [Fusobacterium sp. 3_1_5R]
 gi|313684334|gb|EFS21169.1| metal-binding protein [Fusobacterium sp. 3_1_5R]
          Length = 164

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 4/160 (2%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCE---VVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            L ++++VE         ++ + E    V  + +  +++         + +SL+ T + +
Sbjct: 2   ELLVEVSVEYEKNDYAEFIQEITENNNEVLTEYIEEVLTMEKIESTLPLYVSLLLTGNEQ 61

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGKEFENH 125
           I+ +N E+R  D PT+V+SF               LGDIV++ + +  +A      F   
Sbjct: 62  IQGINREFRKKDSPTDVISFAYHENEDFLVGPYDTLGDIVISLDRVGEQAKEYNHSFTRE 121

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             +++ HG LH+LGYDH++++D   M   E  IL   G  
Sbjct: 122 FYYVLTHGILHILGYDHIEEEDKKEMREREEEILGHFGYT 161


>gi|194397080|ref|YP_002037602.1| putative metalloprotease [Streptococcus pneumoniae G54]
 gi|226702103|sp|B5E486|RRMF_STRP4 RecName: Full=Probable rRNA maturation factor
 gi|194356747|gb|ACF55195.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
          Length = 165

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  QVSKEMLQQTQEILEFAAQKLGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEIAFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAXMFGLQEEILTAYGLT 163


>gi|254995418|ref|ZP_05277608.1| hypothetical protein AmarM_05793 [Anaplasma marginale str.
           Mississippi]
          Length = 154

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           +V  +   +  LN +YRGI K TNVLSF     S   C    LG+I L+ E I  E+  +
Sbjct: 44  VVLANDALLLELNSQYRGIHKATNVLSFSYEKLSPGCC----LGEIYLSMERIAEESLEM 99

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
                +H  H++IHG LH+LGYDH + +DA  M+ LE  +L  LGI +PY
Sbjct: 100 DVAVRSHFFHMLIHGMLHILGYDHEEPEDAITMQALEVGLLAKLGIRNPY 149


>gi|329891158|ref|ZP_08269501.1| uncharacterized protein family UPF0054 family protein
           [Brevundimonas diminuta ATCC 11568]
 gi|328846459|gb|EGF96023.1| uncharacterized protein family UPF0054 family protein
           [Brevundimonas diminuta ATCC 11568]
          Length = 156

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 5/147 (3%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           EI      E +   A     +    +     ++ ++  D   ++ LN  +R  D+PTNVL
Sbjct: 5   EIDSEGWTEALPEAAAVAERAAVAALGTIEGDVVVLLADDAAVQDLNKRFRDKDRPTNVL 64

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SFP A ++        LGD+VL Y     EA   GK   +HL HL++HG LHLLG DH D
Sbjct: 65  SFPAAESAF-----PHLGDVVLGYAYCAAEAETQGKTLSDHLSHLVVHGVLHLLGRDHED 119

Query: 145 DKDACVMEGLERSILEDLGINDPYEVD 171
           D +A  ME  ER IL +LG+ DPY  +
Sbjct: 120 DAEAEEMEAEEREILAELGVADPYAAE 146


>gi|328950644|ref|YP_004367979.1| metalloprotease ybeY [Marinithermus hydrothermalis DSM 14884]
 gi|328450968|gb|AEB11869.1| metalloprotease ybeY [Marinithermus hydrothermalis DSM 14884]
          Length = 141

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            LR L     AK +  L    +        ++++     RI  L   Y G D PT+VLSF
Sbjct: 15  GLRPLLRAKLAKLMEELGYAQHA-------VTVILCSDRRIRELKRRYWGEDAPTDVLSF 67

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           PT F   D      LGDI ++ +  + +A   G   E+ ++ L  H   HLLG+DH  ++
Sbjct: 68  PT-FEPGDPFIPPHLGDIWISLDTAQRQAREAGHTLEDEVLVLAAHALWHLLGHDHASEE 126

Query: 147 DACVMEGLERSIL 159
                  ++  IL
Sbjct: 127 AWQGFRRVQERIL 139


>gi|30682927|ref|NP_850072.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis
           thaliana]
 gi|20466676|gb|AAM20655.1| unknown protein [Arabidopsis thaliana]
 gi|26452541|dbj|BAC43355.1| unknown protein [Arabidopsis thaliana]
 gi|133778884|gb|ABO38782.1| At2g25870 [Arabidopsis thaliana]
 gi|330252671|gb|AEC07765.1| haloacid dehalogenase-like hydrolase domain-containing protein
           [Arabidopsis thaliana]
          Length = 584

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 18/150 (12%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEV-------VFAKAVSNLISKGYFVKE---------N 53
            L + I +E  L  D++ ++ + E+           A + L    Y  +E          
Sbjct: 104 ELSVSICIEEQL-PDDLEIQNIAEMLRLNVPMAMTLAFNGLKDSKYKTRETDIEDLGGYE 162

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
            VELS++  +   I  LN E+RG D  T+VLS             LM+GD+V++ E    
Sbjct: 163 TVELSVMLCNDDFICKLNKEWRGEDHATDVLSMSQHVPEL-KLPVLMMGDLVISVETAAR 221

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +A   G    + +  L+IHG LHLLG+DH 
Sbjct: 222 QAAERGHTLLDEIRILVIHGLLHLLGFDHE 251


>gi|296273646|ref|YP_003656277.1| hypothetical protein Arnit_2116 [Arcobacter nitrofigilis DSM 7299]
 gi|296097820|gb|ADG93770.1| protein of unknown function UPF0054 [Arcobacter nitrofigilis DSM
           7299]
          Length = 139

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+   +  I+TLN E+R IDK T+VLSFP  +       ++ LG IV++ + +E +A
Sbjct: 28  DIELILVYNDEIQTLNKEHRNIDKATDVLSFPLEYD----MPNMPLGSIVISVDFVEDKA 83

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
                 F + L  L IHG LHLLGYDH  + D       E  +++   + +
Sbjct: 84  KEYNHSFLDELTLLFIHGMLHLLGYDH--EVDKGEHRKKEEELIKKYNLPN 132


>gi|313672928|ref|YP_004051039.1| hypothetical protein Calni_0965 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939684|gb|ADR18876.1| protein of unknown function UPF0054 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 149

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           N  E+SLV TD   ++ +N  YR ID  T+VLSFP          S +LGDIV++Y+  +
Sbjct: 38  NTAEISLVITDDEEMKEINRLYRKIDSTTDVLSFPIN--DGKDIKSNILGDIVISYDKAK 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLERSILEDL 162
            ++       E  +  L IHG LHLLGYDH   + D   M  ++    +  
Sbjct: 96  SQSVENECTIEEEIAFLFIHGLLHLLGYDHDSSEVDEKEMFEMQEDFFQKF 146


>gi|289523170|ref|ZP_06440024.1| putative metalloprotease [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503713|gb|EFD24877.1| putative metalloprotease [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 166

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS----- 92
           K +S  +          +E+SL      R++ LN  +RGID+PT+VLSFP          
Sbjct: 31  KIISQELRTSRLDPHVSIEISLTLLGPERMQELNKRHRGIDEPTDVLSFPLWEEEGTFCM 90

Query: 93  -SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             +    + LGDIV+   ++   A VLGK  E  L  + +HG LHLLGYDH   ++  +M
Sbjct: 91  PEEIAGEVSLGDIVICPYVVAENARVLGKNPEEELKLIYVHGLLHLLGYDHATLEEEAIM 150

Query: 152 EGLERSIL 159
              +   L
Sbjct: 151 WKKQEEYL 158


>gi|148377382|ref|YP_001256258.1| hypothetical protein MAG_1150 [Mycoplasma agalactiae PG2]
 gi|148291428|emb|CAL58813.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2]
          Length = 152

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +  + + +SNL    + +++  + + +   ++ +I+ LN EYR  D  T++LSF     S
Sbjct: 17  KAEYEQILSNL-QTYFKLEDKEISVDVSIVNNRKIKKLNKEYRQKDYATDILSFDFGDKS 75

Query: 93  S-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                  L LG++V+++E +E +A   G        +L  HG +HL+GYDH  + +   M
Sbjct: 76  LYKSMPFLPLGELVISHEKVEEQAKEFGHSLRREYCYLYAHGLIHLMGYDHEVENERIEM 135

Query: 152 EGLERSILEDLGIN 165
             +  +I   L I 
Sbjct: 136 NKIVDAIFNPLNIT 149


>gi|297708196|ref|XP_002830862.1| PREDICTED: putative metalloprotease C21orf57-like isoform 1 [Pongo
           abelii]
 gi|297708198|ref|XP_002830863.1| PREDICTED: putative metalloprotease C21orf57-like isoform 2 [Pongo
           abelii]
          Length = 167

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 93  LGVEYIFHQCQE-NEDYNDVLTVTATHGLCHLLGFTHSTEAEWQQMFQKEKAVLDELG 149


>gi|312864823|ref|ZP_07725054.1| translation metalloprotein YbeY [Streptococcus downei F0415]
 gi|311099950|gb|EFQ58163.1| translation metalloprotein YbeY [Streptococcus downei F0415]
          Length = 165

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 17/154 (11%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS--- 85
           + + + +  K    L      + +   E+++ F D+ +I  +N +YR +D+PT+V+S   
Sbjct: 10  KQVSQEMMDKIKDMLNFAAKKLGKENKEMAITFVDNEKIHQINLDYRDMDRPTDVVSLEY 69

Query: 86  -------FPTAFASSDGCS-------SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
                  F      +D             +G++ ++ +    +A   G  FE  +  L +
Sbjct: 70  KPETDIVFSEEDLETDPDLAAVMEDYDAYIGELFISVDKAHEQAESYGHSFEREMGFLAV 129

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 130 HGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLT 163


>gi|260903864|ref|ZP_05912186.1| hypothetical protein BlinB_00925 [Brevibacterium linens BL2]
          Length = 162

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 13/152 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           ++ +I+ E     D   +  L E +                    EL++   D+  +  L
Sbjct: 1   MNTEISNETDESIDLDEVVALTEYLGQA----------LHMHPGAELAVTMVDATAMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           +  +  ++ PT+V+SFP            +   +GDI++  E+   +A+  G    + ++
Sbjct: 51  HVTWMDLEGPTDVMSFPMDQLTQGQPGAPTEGQMGDIIICPEVAAAQASSSGHTTMDEVL 110

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            L +HGFLHLLGYDH +  +   M  L+R +L
Sbjct: 111 LLTVHGFLHLLGYDHGEPAEKEEMFTLQRHLL 142


>gi|322391810|ref|ZP_08065275.1| metalloprotease [Streptococcus peroris ATCC 700780]
 gi|321145290|gb|EFX40686.1| metalloprotease [Streptococcus peroris ATCC 700780]
          Length = 165

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
           T+ + +  +    L      + +   E+++ F  + R   LN EYR  D+PT+V+S    
Sbjct: 11  TVSQEILQQTQDLLEFAAKKIGKEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                 F   +   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELDITFEDEELAENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLSVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFSLQEEILTAYGLT 163


>gi|301794105|emb|CBW36511.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
 gi|332204970|gb|EGJ19035.1| hypothetical protein SPAR120_0938 [Streptococcus pneumoniae
           GA47901]
          Length = 165

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT- 88
            + + +  +    L      + +   E+++ F  + R   LN  YR  D+PT+V+S    
Sbjct: 11  QVSKEMLQQTQEILEFAAQKLGKEDKEMAVTFVTNERSHELNLGYRDTDRPTDVISLEYK 70

Query: 89  -----AFASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                AF   D   +  L           G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEIAFDEEDLLENPELAEMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|168702468|ref|ZP_02734745.1| hypothetical protein GobsU_23272 [Gemmata obscuriglobus UQM 2246]
          Length = 146

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 6/134 (4%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E    K  +  + +G  VK     ++L F D+  I  LN ++   ++PT+VL+FP     
Sbjct: 15  EFQQLKDAARAVLEGEGVKAGK--VTLAFVDNPHIHRLNKQFLNHNEPTDVLTFPY---- 68

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
           +D  +  + G++V+ YE+ +  A      F   L+  ++HG LHL GYD  DD     M 
Sbjct: 69  TDPGAKSLEGEVVIGYEVAKEYAADRNHAFNLELLLYVVHGCLHLTGYDDTDDDSEREMR 128

Query: 153 GLERSILEDLGIND 166
             ER  L  LG+ D
Sbjct: 129 AKEREYLTKLGLPD 142


>gi|54607072|ref|NP_478061.1| rRNA maturation factor homolog isoform 1 [Homo sapiens]
 gi|47117865|sp|P58557|YBEY_HUMAN RecName: Full=rRNA maturation factor homolog
 gi|119629693|gb|EAX09288.1| chromosome 21 open reading frame 57, isoform CRA_a [Homo sapiens]
 gi|119629696|gb|EAX09291.1| chromosome 21 open reading frame 57, isoform CRA_a [Homo sapiens]
          Length = 167

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 93  LGVEYIFHQCKE-NEDYNDVLTVTATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 149


>gi|152981675|ref|YP_001352119.1| hypothetical protein mma_0429 [Janthinobacterium sp. Marseille]
 gi|172049086|sp|A6SV22|RRMF_JANMA RecName: Full=Probable rRNA maturation factor
 gi|151281752|gb|ABR90162.1| Hypothetical protein mma_0429 [Janthinobacterium sp. Marseille]
          Length = 152

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + D+     +        V   +           +++L F D+   + LN  YRG D  
Sbjct: 12  QYPDKRLQDIITRPKLRSWVKAALLA-------PAQITLRFVDAAEGKDLNRNYRGKDYA 64

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           TNVL+F          +     DI+L  +++++EA    K  E H  HL++HG LH  GY
Sbjct: 65  TNVLTFAYTEDEDSETTQA---DIILCTDVLQLEAAEQEKSVEEHAAHLVVHGVLHAQGY 121

Query: 141 DHVDDKDACVMEGLERSILEDLGINDPY 168
           DH  D++A  ME LE  IL DLG  +PY
Sbjct: 122 DHESDEEAEEMEALEIEILADLGFRNPY 149


>gi|148263839|ref|YP_001230545.1| hypothetical protein Gura_1782 [Geobacter uraniireducens Rf4]
 gi|146397339|gb|ABQ25972.1| protein of unknown function UPF0054 [Geobacter uraniireducens Rf4]
          Length = 129

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELSL       I  LN +Y   DKPTNV+SF          +  +LGD++++ +    EA
Sbjct: 15  ELSLTIVGDRSIRRLNRDYLERDKPTNVISFAMQEGLFGELNPEVLGDVIISADTAAREA 74

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSILEDL 162
              G  F   L  L++HG LH+ GYDH    + +A  ME   R I   L
Sbjct: 75  EEGGMPFFARLSFLLLHGILHITGYDHERSGESEARRMEAKAREIFGLL 123


>gi|309800250|ref|ZP_07694426.1| conserved hypothetical protein [Streptococcus infantis SK1302]
 gi|308116103|gb|EFO53603.1| conserved hypothetical protein [Streptococcus infantis SK1302]
          Length = 165

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS---- 85
            + + +  +    L      + +   E+++ F  + R   LN E+R  D+PT+V+S    
Sbjct: 11  QVSKEILEQTQEILEFAAKKIGKEDKEMAVTFVTNERSHELNLEFRDTDRPTDVISLEYK 70

Query: 86  ------FPTAFASSDGCSSLM-------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                 F      +D   + M       +G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEIAFDEEDLENDPDLADMMSEFDAYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|309811100|ref|ZP_07704898.1| translation metalloprotein YbeY [Dermacoccus sp. Ellin185]
 gi|308435064|gb|EFP58898.1| translation metalloprotein YbeY [Dermacoccus sp. Ellin185]
          Length = 168

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + IA E  +  +   +             +            VELS+   D   +ETL
Sbjct: 1   MTIDIANETDVDVELDEIHDCARYAMDAMFVH----------PNVELSIRIIDEAAMETL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++  +  PT+V+SFP       +  +     MLGDIVL   +   +A   G +    L
Sbjct: 51  HVQWMDLPGPTDVMSFPMDELTPGSEREPSQEGMLGDIVLCPSVAAAQAAAAGHDTMEEL 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L +HG LHLLGYDH +  +   M  L+R+IL
Sbjct: 111 LLLTVHGVLHLLGYDHAEPDERVEMFELQRTIL 143


>gi|261414960|ref|YP_003248643.1| protein of unknown function UPF0054 [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371416|gb|ACX74161.1| protein of unknown function UPF0054 [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 161

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 9/146 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E ++ +       +A++  +      + N   +++V      +  +N  YRG+DK T+VL
Sbjct: 18  EGNIESFPWKDKFEAMARKLLAEEGTENN---VNIVLCTDEFVREMNKNYRGLDKVTDVL 74

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF   +         MLG+I +A + ++ +A   G  F   +  +I+HG LHL GYDH+ 
Sbjct: 75  SF--EWHEEIPGEEEMLGEIYIARDQVKRQAPQYGNSFFAEMKRVIVHGLLHLSGYDHIK 132

Query: 145 DKDACVMEGLERSILEDLGINDPYEV 170
             D  VM   E    E LG+ DPY+ 
Sbjct: 133 AADRKVMRARE---CEFLGL-DPYKD 154


>gi|47086839|ref|NP_997759.1| rRNA maturation factor homolog [Danio rerio]
 gi|326681334|ref|XP_003201790.1| PREDICTED: rRNA maturation factor homolog [Danio rerio]
 gi|45709063|gb|AAH67584.1| Zgc:85702 [Danio rerio]
          Length = 163

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC-------SSLMLGDIV 105
              ++ ++  D+ +I+ +N  YR  ++PT+VLSFP       G            LGDI 
Sbjct: 33  QKFDMGIICVDNRKIQRINHTYRRRNQPTDVLSFPFYEDLRPGKVPCALQRDEYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           L  E +  +     ++    L  +  HG  HLLGY H  +++   M+  E  IL +  
Sbjct: 93  LGVEYVMQQCKETKQDLHQTLTVVTAHGICHLLGYRHETEEEWNEMQQKESYILSEFN 150


>gi|332872338|ref|XP_001145583.2| PREDICTED: rRNA maturation factor homolog isoform 1 [Pan
           troglodytes]
 gi|332872340|ref|XP_003319177.1| PREDICTED: rRNA maturation factor homolog isoform 2 [Pan
           troglodytes]
          Length = 167

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRVYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 93  LGVEYIFHQCKE-NEDYNDILTVTATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 149


>gi|308235188|ref|ZP_07665925.1| putative metalloprotease [Gardnerella vaginalis ATCC 14018]
 gi|311114843|ref|YP_003986064.1| putative metalloprotease [Gardnerella vaginalis ATCC 14019]
 gi|310946337|gb|ADP39041.1| probable metalloprotease [Gardnerella vaginalis ATCC 14019]
          Length = 175

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIE 112
           +LS+ F D   I +L+ ++  ++ PT+V+SFP       S D  S  MLGD+V+   +  
Sbjct: 36  DLSITFVDPEPIASLHEKWMDLEGPTDVMSFPMDELTPGSDDKVSEGMLGDLVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   ++   M GL+R +L
Sbjct: 96  QQAAAAGHSTMEEMLLLTIHGMLHLLGYDHTTPQEEKQMFGLQRQLL 142


>gi|313665395|ref|YP_004047266.1| metalloprotein, YbeY family [Mycoplasma leachii PG50]
 gi|312950006|gb|ADR24602.1| metalloprotein, YbeY family [Mycoplasma leachii PG50]
          Length = 164

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 5/130 (3%)

Query: 36  FAKAVSNLISK---GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           F K  +N I K    YF     +ELS+ F D  + + +N +YR      +V SF      
Sbjct: 16  FWKKFANKILKTAYEYFNFNYDIELSITFVDDLKAQQINQKYRNHSYIADVTSFSVEMTD 75

Query: 93  SD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
            +        LGD+ +     + +A     +  + +  L +HGFLHLLGYDH D  D  +
Sbjct: 76  QEIKAIGFRELGDMFINLSEAKRKAIKYEHDLNSEMGFLFVHGFLHLLGYDHEDLDDEKI 135

Query: 151 MEGLERSILE 160
           M  L+  IL+
Sbjct: 136 MFDLQDQILK 145


>gi|47459183|ref|YP_016045.1| putative metal binding protein [Mycoplasma mobile 163K]
 gi|59799113|sp|Q6KHU4|RRMF_MYCMO RecName: Full=Probable rRNA maturation factor
 gi|47458512|gb|AAT27834.1| putative metal binding protein [Mycoplasma mobile 163K]
          Length = 152

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 3/140 (2%)

Query: 29  RTLCEVVFAKAVSNLISK-GYFVKEN-IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +T     + K   N++ +   F KE   +EL L   D+  I+ ++ +Y   DK T+VLSF
Sbjct: 10  QTNYRFRYKKDFQNILDEIALFFKEKLPLELDLNIVDNILIKKISKQYYKKDKETDVLSF 69

Query: 87  PTAFAS-SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           P+  A+  +      +G+I L YE + ++A       +    +L  HG +HL GYDHV +
Sbjct: 70  PSELANMKNALGFFHIGEIFLNYEKVILQAKEYNHSLKREFCYLFTHGIIHLYGYDHVKE 129

Query: 146 KDACVMEGLERSILEDLGIN 165
            +A  M  +  SI++ L I 
Sbjct: 130 NEAKEMNAIVESIMQKLNIK 149


>gi|303239955|ref|ZP_07326477.1| protein of unknown function UPF0054 [Acetivibrio cellulolyticus
           CD2]
 gi|302592434|gb|EFL62160.1| protein of unknown function UPF0054 [Acetivibrio cellulolyticus
           CD2]
          Length = 162

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 13/142 (9%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           +  +AV++ +    F   +  E+S++F D   I  +N E+R IDKPT+VLSFP       
Sbjct: 21  LVKRAVNSSLEFEKFSIPS--EISVMFVDDEGIREINREHRSIDKPTDVLSFPIVDMYEG 78

Query: 95  GCSSLMLGD-----------IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
             +S                IV++ E+ +++A   G  FE  L  L+ HG  HLLGYDH 
Sbjct: 79  VINSDDGDFDLDEDLLLLGDIVISLEMTKLQAQEYGHSFERELAFLLTHGVFHLLGYDHD 138

Query: 144 DDKDACVMEGLERSILEDLGIN 165
             +    M   +  +LE L ++
Sbjct: 139 SPEREEKMISKQYGVLEILNLS 160


>gi|42526751|ref|NP_971849.1| putative metalloprotease [Treponema denticola ATCC 35405]
 gi|59799128|sp|Q73NB3|RRMF_TREDE RecName: Full=Probable rRNA maturation factor
 gi|41817066|gb|AAS11760.1| conserved hypothetical protein TIGR00043 [Treponema denticola ATCC
           35405]
 gi|325473810|gb|EGC76998.1| metalloprotease [Treponema denticola F0402]
          Length = 155

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS--LMLGDIVLAYEIIEI 113
           ++SL+F D   I+ LN +YR ID PT+VLSF       D       M GDIV++ + +  
Sbjct: 39  DISLLFCDDAFIQNLNKQYRDIDSPTDVLSFEQGDEYFDEAGETRFMAGDIVISLDSLSF 98

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            A     +    L  LI+HG LHL G DH D+     M   +  +L
Sbjct: 99  NAEEFNVDINEELKRLIVHGILHLNGMDHSDNSPEQEMLKFQEELL 144


>gi|322387706|ref|ZP_08061315.1| metalloprotease [Streptococcus infantis ATCC 700779]
 gi|321141573|gb|EFX37069.1| metalloprotease [Streptococcus infantis ATCC 700779]
          Length = 165

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS---- 85
            + + +  +    L      + +   E+++ F  + R   LN E+R  D+PT+V+S    
Sbjct: 11  QVSKEILKQTQEILEFAAKKIGKEDKEMAVTFVTNERSHELNLEFRATDRPTDVISLEYK 70

Query: 86  ------FPTAFASSDGCSSLM-------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                 F     + D   + M       +G++ ++ +    +A   G  FE  +  L +H
Sbjct: 71  PELEITFDEEDLAEDPDLAEMMSEFDSYIGELFISIDKAHEQAEEYGHSFEREMGFLAVH 130

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           GFLH+ GYDH   ++   M GL+  IL   G+ 
Sbjct: 131 GFLHINGYDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|239618150|ref|YP_002941472.1| protein of unknown function UPF0054 [Kosmotoga olearia TBF 19.5.1]
 gi|239506981|gb|ACR80468.1| protein of unknown function UPF0054 [Kosmotoga olearia TBF 19.5.1]
          Length = 145

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 12/146 (8%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N     E+    L E++        I +    +     L+++ T    +   N  YR   
Sbjct: 6   NNATSKEVDTDRLKELIVK------ILESELDELPDSTLNVLLTTDEEMTYYNETYRHKK 59

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
            PT+VLSF       +       GDIV++ E IE +A   G  F+  L  ++IHG LH+L
Sbjct: 60  GPTDVLSFEYGLDDPEAV-----GDIVISLETIEKQAKEFGNTFQEELSLMLIHGVLHIL 114

Query: 139 GYDHV-DDKDACVMEGLERSILEDLG 163
           GYDH  D+++A +M   +       G
Sbjct: 115 GYDHEGDEEEAKIMFEKQEDYFNKYG 140


>gi|291320052|ref|YP_003515310.1| hypothetical protein MAGa1210 [Mycoplasma agalactiae]
 gi|290752381|emb|CBH40352.1| Conserved hypothetical protein [Mycoplasma agalactiae]
          Length = 152

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +  + + +SNL    + +++  + + +   ++ +I+ LN EYR  D  T++LSF     S
Sbjct: 17  KAEYEQILSNL-QTYFKLEDKEISVDVSIVNNGKIKKLNKEYRQKDYATDILSFDFGDKS 75

Query: 93  S-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                  L LG++V+++E +E +A   G        +L  HG +HL+GYDH  + +   M
Sbjct: 76  LYKSMPFLPLGELVISHEKVEEQAKEFGHSLRREYCYLYAHGLIHLMGYDHEVENERIEM 135

Query: 152 EGLERSILEDLGIN 165
             +  +I + L I 
Sbjct: 136 NKIVDAIFDPLNIT 149


>gi|289178678|gb|ADC85924.1| Hypothetical metal-binding protein [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 193

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIE 112
           EL++ F D   I  L+  +  +  PT+V+SFP               MLGDIV+   + +
Sbjct: 48  ELTITFVDPEPIAELHERWMDLQGPTDVMSFPMDELRPGDERNEPEGMLGDIVICPWVAQ 107

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +    M GL+R +L
Sbjct: 108 QQAQAAGHSTMEEMMLLTIHGVLHLLGYDHHTREQERQMFGLQRQLL 154


>gi|302877838|ref|YP_003846402.1| hypothetical protein Galf_0596 [Gallionella capsiferriformans ES-2]
 gi|302580627|gb|ADL54638.1| protein of unknown function UPF0054 [Gallionella capsiferriformans
           ES-2]
          Length = 153

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 13/138 (9%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
               + + +   + +        V L+L   D      LN  YRG D  TNVL+F     
Sbjct: 27  ARPQWRRWIKAALQR-------DVSLALRIVDEAEGRELNKAYRGRDYATNVLTFVYDED 79

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                   + GD+V+   ++  EA    K+   H  HL IH  LHL GYDH  D +A  M
Sbjct: 80  DH------LSGDVVICAPVVAREATEQDKDLLTHYAHLAIHAALHLQGYDHEVDAEAEEM 133

Query: 152 EGLERSILEDLGINDPYE 169
           E LE +++  LG  DPY+
Sbjct: 134 EALETALMLKLGYPDPYK 151


>gi|93005420|ref|YP_579857.1| hypothetical protein Pcryo_0590 [Psychrobacter cryohalolentis K5]
 gi|122415831|sp|Q1QD80|RRMF_PSYCK RecName: Full=Probable rRNA maturation factor
 gi|92393098|gb|ABE74373.1| protein of unknown function UPF0054 [Psychrobacter cryohalolentis
           K5]
          Length = 155

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 3/121 (2%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAY 108
           +E I  L +  TD      LN E R  D  TN+LS+P+   ++      +L LG++++ +
Sbjct: 34  QEKIKVLDIYITDEVEGRELNLEARQKDYATNILSYPSDLPAAIIGLMPTLPLGELIICH 93

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDP 167
            ++  EA    KE   H+ HL+IHG LHLLG+DH     +   ME  E  IL  L I +P
Sbjct: 94  AVMIREAAEQNKEAVQHISHLLIHGVLHLLGFDHELGQAEQDEMERFEIEILAGLNIPNP 153

Query: 168 Y 168
           Y
Sbjct: 154 Y 154


>gi|123967737|ref|YP_001008595.1| metal-dependent hydrolase [Prochlorococcus marinus str. AS9601]
 gi|145572764|sp|A2BNX7|RRMF_PROMS RecName: Full=Probable rRNA maturation factor
 gi|123197847|gb|ABM69488.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           AS9601]
          Length = 179

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)

Query: 31  LCEVVFAKAVSNLIS------KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
             E VF   ++ ++         Y   +    L L    +  I +LN ++   + PT+VL
Sbjct: 40  FWEKVFLSWINTILKNEDYELPNYIFDKKSFSLGLQIISNQEIASLNKKWMQKNGPTDVL 99

Query: 85  SFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           SFP     S +    + LGDI ++ E+   ++          ++ L  HGFLHLLG++H 
Sbjct: 100 SFPIISDESLNNLDHIELGDIFISLEMALEQSYEYKHSIYREMIWLASHGFLHLLGWEHN 159

Query: 144 DDKDACVMEGLERSILEDL 162
           ++ D   M   +  ++  L
Sbjct: 160 NEHDLENMLNFQEYLITRL 178


>gi|304439779|ref|ZP_07399677.1| metal dependent hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371766|gb|EFM25374.1| metal dependent hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 144

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           K++   + +  F   +  E+S+ F     I  LN +YRG+D+ T+VLSFP      D   
Sbjct: 23  KSIEAALKEIEFT--DDYEVSVSFVGDDEIHELNRDYRGVDRTTDVLSFPM-----DDEF 75

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           + MLGDIV+    +  +A   G   +  + +L +H  LHL+G+DH +++D   M  +E  
Sbjct: 76  TNMLGDIVININKVIEQAKEYGHSEKREISYLTVHSSLHLMGFDHEEEEDKKEMRAVEDR 135

Query: 158 ILEDLGIN 165
           ++E L I+
Sbjct: 136 VMEKLEIS 143


>gi|25091585|sp|Q8K9C1|RRMF_BUCAP RecName: Full=Probable rRNA maturation factor
          Length = 158

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 13/166 (7%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           +KK N   L +Q   +N     +       + +F K +  ++ K    K+N+  +++   
Sbjct: 1   MKKKNNIILTIQKNCKNTKNIPK-------KYIFEKWIKKVLYK----KKNVNLINIRIV 49

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           D   ++ +N +YRG +K TN+LSF   F      +  +LGD+VL  +IIE E+    K  
Sbjct: 50  DEREMKNINLKYRGKNKSTNILSF--KFDLFINKNQTLLGDLVLCKKIIEKESLKYQKTL 107

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E+   H+IIHG LHLLGYDH + K+  +ME +E  I+  L    PY
Sbjct: 108 ESRWAHMIIHGTLHLLGYDHKNKKEKKIMEKIENKIMLFLNYEKPY 153


>gi|302338950|ref|YP_003804156.1| protein of unknown function UPF0054 [Spirochaeta smaragdinae DSM
           11293]
 gi|301636135|gb|ADK81562.1| protein of unknown function UPF0054 [Spirochaeta smaragdinae DSM
           11293]
          Length = 153

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 4/111 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEII 111
           ELS++F +   +  LN  +RGID PT+VLSF      +        S+  GDIV++ + +
Sbjct: 37  ELSILFCNDDTMRDLNRTWRGIDAPTDVLSFSQLEEENVVSGSEDGSVYAGDIVISLDTL 96

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           ++ + +     E  L  L+IHG LHL GYDH  ++ +  M  L+  I++  
Sbjct: 97  DLHSKLFSVAREEELKRLLIHGILHLAGYDHETNEGSEPMLTLQEEIVKTF 147


>gi|213692454|ref|YP_002323040.1| protein of unknown function UPF0054 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|254800568|sp|B7GS82|RRMF_BIFLI RecName: Full=Probable rRNA maturation factor
 gi|213523915|gb|ACJ52662.1| protein of unknown function UPF0054 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320458599|dbj|BAJ69220.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 182

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           +L+++F D + I  L+  +  ++ PT+V+SFP               +LGDIV+   +  
Sbjct: 36  DLTIMFVDPNPIAELHMRWMNLEGPTDVMSFPMDELRPGDGKTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|145572760|sp|Q2JU40|RRMF_SYNJA RecName: Full=Probable rRNA maturation factor
          Length = 163

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 7/135 (5%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E  + +     + +      +  ELSL  T    I  LN E+R ID PT+VL+F     S
Sbjct: 19  EATWHRWFEVWLRELGVT--DPCELSLCLTSDEHIRQLNREFRHIDAPTDVLAFAAEETS 76

Query: 93  SDG-----CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
           +           +LGDIV++      +A   G+     L  L  HG LHLLG+DH D+  
Sbjct: 77  TPVELQKITGVRLLGDIVISVPTACAQAKAQGQRLSRELAWLASHGLLHLLGWDHPDELS 136

Query: 148 ACVMEGLERSILEDL 162
              M   +  +L  +
Sbjct: 137 LQRMLQQQHHLLAAI 151


>gi|157737127|ref|YP_001489810.1| putative metalloprotease [Arcobacter butzleri RM4018]
 gi|167016839|sp|A8ET67|RRMF_ARCB4 RecName: Full=Probable rRNA maturation factor
 gi|157698981|gb|ABV67141.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
          Length = 140

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+   +  I+ LN EYR IDKPT+VLSFP  F   +     +LG IV++ + ++ +A
Sbjct: 28  DIELIVVKNDEIQELNKEYRNIDKPTDVLSFPMNF---EVIDMPLLGSIVISTDFVQEKA 84

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                 F      L IHG LHLLG+DH  D         E  ++E   + 
Sbjct: 85  KEFKHSFNEEFTLLFIHGLLHLLGFDHEIDN--GEHRLKEEELIEKFKLP 132


>gi|23465435|ref|NP_696038.1| putative metalloprotease [Bifidobacterium longum NCC2705]
 gi|46191169|ref|ZP_00120251.2| COG0319: Predicted metal-dependent hydrolase [Bifidobacterium
           longum DJO10A]
 gi|189439458|ref|YP_001954539.1| putative metalloprotease [Bifidobacterium longum DJO10A]
 gi|227545911|ref|ZP_03975960.1| metalloprotease [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239622041|ref|ZP_04665072.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|296454042|ref|YP_003661185.1| hypothetical protein BLJ_0890 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312132866|ref|YP_004000205.1| metal-dependent hydrolase [Bifidobacterium longum subsp. longum
           BBMN68]
 gi|317482194|ref|ZP_07941216.1| hypothetical protein HMPREF0177_00609 [Bifidobacterium sp.
           12_1_47BFAA]
 gi|322688981|ref|YP_004208715.1| hypothetical protein BLIF_0794 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322690950|ref|YP_004220520.1| hypothetical protein BLLJ_0760 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|29428213|sp|Q8G5Z0|RRMF_BIFLO RecName: Full=Probable rRNA maturation factor
 gi|238692063|sp|B3DSC2|RRMF_BIFLD RecName: Full=Probable rRNA maturation factor
 gi|23326086|gb|AAN24674.1| conserved hypothetical protein with duf0054 [Bifidobacterium longum
           NCC2705]
 gi|189427893|gb|ACD98041.1| Putative metal-dependent hydrolase [Bifidobacterium longum DJO10A]
 gi|227213545|gb|EEI81394.1| metalloprotease [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239515232|gb|EEQ55099.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291516986|emb|CBK70602.1| conserved hypothetical protein TIGR00043 [Bifidobacterium longum
           subsp. longum F8]
 gi|296183473|gb|ADH00355.1| protein of unknown function UPF0054 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|311773835|gb|ADQ03323.1| Putative metal-dependent hydrolase [Bifidobacterium longum subsp.
           longum BBMN68]
 gi|316916332|gb|EFV37732.1| hypothetical protein HMPREF0177_00609 [Bifidobacterium sp.
           12_1_47BFAA]
 gi|320455806|dbj|BAJ66428.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320460317|dbj|BAJ70937.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 182

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP               +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAELHMRWMNLEGPTDVMSFPMDELRPGDGKTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|88809863|ref|ZP_01125369.1| hypothetical protein WH7805_10818 [Synechococcus sp. WH 7805]
 gi|88786247|gb|EAR17408.1| hypothetical protein WH7805_10818 [Synechococcus sp. WH 7805]
          Length = 200

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 4/136 (2%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            L    E +          +        V L L  T    I  LN  +RG+ + T+VLSF
Sbjct: 44  DLCRWLEALKQSWEQPTAPQ--LRDCLDVSLGLQLTGDREIAELNGRWRGLPQATDVLSF 101

Query: 87  PTAFASSD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
               +       ++L LGDIV++      +A   G   E  L  L+ HG LHLLG+DH D
Sbjct: 102 AALESEMPLQQATTLELGDIVVSVPTAARQAIEQGHSLERELQWLVSHGLLHLLGWDHPD 161

Query: 145 DKDACVMEGLERSILE 160
           +     M   +  +L 
Sbjct: 162 ETTLNAMIACQERLLA 177


>gi|315636838|ref|ZP_07892063.1| metalloprotease [Arcobacter butzleri JV22]
 gi|315478892|gb|EFU69600.1| metalloprotease [Arcobacter butzleri JV22]
          Length = 140

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+   +  I+ LN EYR IDKPT+VLSFP  F   +     +LG IV++ + ++ +A
Sbjct: 28  DIELIVVKNDEIQELNKEYRNIDKPTDVLSFPMNF---EVIDMPLLGSIVISTDFVQEKA 84

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                 F      L IHG LHLLG+DH  D         E  ++E   + 
Sbjct: 85  KEFKHSFNEEFTLLFIHGLLHLLGFDHEIDN--GEHRLKEEELIEKFKLP 132


>gi|91202468|emb|CAJ72107.1| hypothetical protein kustd1362 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 144

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 5/141 (3%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E+  R     +  K +  LI +    +     LS+V TD+  I  LN  + G D  T+VL
Sbjct: 4   EVVNRQKSYAIDEKRIVKLIKRVLKSENKDASLSIVVTDNKEIRRLNKAFLGHDYATDVL 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF       D   + + G+I+++ E+    A     + E  +   +IHG LHL+GY+   
Sbjct: 64  SFIY-----DASENHVAGEIIVSAEMAYKVAKEHCHDAEGEIALYLIHGLLHLIGYNDKK 118

Query: 145 DKDACVMEGLERSILEDLGIN 165
             DA VM   E+ +L  LG N
Sbjct: 119 KGDAKVMHRREKELLSKLGYN 139


>gi|307721060|ref|YP_003892200.1| hypothetical protein Saut_1140 [Sulfurimonas autotrophica DSM
           16294]
 gi|306979153|gb|ADN09188.1| protein of unknown function UPF0054 [Sulfurimonas autotrophica DSM
           16294]
          Length = 139

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           V+N + +         ++ LV T +  I+ +N EYR IDKPT+VLSFP            
Sbjct: 12  VNNTLLQKIASSVTDKDIELVVTTNDEIQQINKEYRNIDKPTDVLSFPYEE-----MPMS 66

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LG IV++ +++  +A  LG   E+    L IHG LHLLGYDH  D     M   E  ++
Sbjct: 67  PLGSIVVSQDLVIAKAKELGHAQEDEFTLLFIHGLLHLLGYDHEIDN--GQMRQEEERLI 124

Query: 160 EDLGIN 165
            +  + 
Sbjct: 125 NEFNLP 130


>gi|302039360|ref|YP_003799682.1| hypothetical protein NIDE4088 [Candidatus Nitrospira defluvii]
 gi|300607424|emb|CBK43757.1| conserved protein of unknown function, putative Metalloprotease
           [Candidatus Nitrospira defluvii]
          Length = 156

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           LSL      R+  LN  +R  DK T+VL+F T      G  S +LGD+V++      +A 
Sbjct: 37  LSLEIVGDVRMRRLNRTFRHRDKTTDVLAFATR--EGPGPPSSLLGDVVISLPQAIRQAR 94

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILED 161
             G+  ++ L  L+IHG LHL GYDH   + +A  M   E+++L  
Sbjct: 95  RHGQGVDHELAVLLIHGILHLCGYDHERSEAEAQRMSRREKALLRA 140


>gi|126695540|ref|YP_001090426.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9301]
 gi|166227511|sp|A3PAQ0|RRMF_PROM0 RecName: Full=Probable rRNA maturation factor
 gi|126542583|gb|ABO16825.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9301]
          Length = 179

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 31  LCEVVFAKAVSNLISKG------YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
             E VF   ++ ++ K       Y  ++    L L    +  I +LN ++   + PT+VL
Sbjct: 40  FWEKVFLSWINTILKKEDYELPNYIFEKKSFSLGLQIISNQEIASLNKKWMQKNGPTDVL 99

Query: 85  SFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           SFP     S +    + LGDI ++ E+   ++          ++ L  HGFLHLLG++H 
Sbjct: 100 SFPIISDESLNNLDHIELGDIFISLEMALEQSYEYKNSIYREMIWLASHGFLHLLGWEHN 159

Query: 144 DDKDACVMEGLERSILEDL 162
           ++ D   M   +  +++ L
Sbjct: 160 NEHDLENMLNFQEYLIKKL 178


>gi|297287364|ref|XP_002803146.1| PREDICTED: putative metalloprotease C21orf57-like [Macaca mulatta]
          Length = 167

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YRG + PT+VLSFP         F   +      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRIYRGRNVPTDVLSFPFHEHLKAGEFPLPEFPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 93  LGVEYIFHQCKE-DEDYNDVLTVTATHGLCHLLGFTHSTEAEWQQMFQKEKAVLDELG 149


>gi|72383386|ref|YP_292741.1| hypothetical protein PMN2A_1550 [Prochlorococcus marinus str.
           NATL2A]
 gi|123620478|sp|Q46HJ0|RRMF_PROMT RecName: Full=Probable rRNA maturation factor
 gi|72003236|gb|AAZ59038.1| Protein of unknown function UPF0054 [Prochlorococcus marinus str.
           NATL2A]
          Length = 184

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 7/166 (4%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVV-----FAKAVSNLISKGYFVKENIVELSLV 60
              P  DL + V +       +     E +     F +  S L      +  +   L L 
Sbjct: 18  TPFPVQDLDVFVNSDTLELMKNPSKWIEEIGSWIRFIQVNSALKCPEIVLNSSQFSLGLE 77

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEANVL 118
            T+  +I  LN  + G  K T+VLSFP    +  G     + LGDIV++      +A   
Sbjct: 78  LTNDKKILDLNHAWLGQSKATDVLSFPIIDETFFGVSNECIELGDIVISVPTAIRQAKDN 137

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +    L  L  HG LHLLG+DH D++    M  ++  +LE  GI
Sbjct: 138 NADLFRELRWLATHGLLHLLGWDHSDEESLHKMLLIQEQLLEIRGI 183


>gi|295396067|ref|ZP_06806250.1| probable metalloprotease [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971008|gb|EFG46900.1| probable metalloprotease [Brevibacterium mcbrellneri ATCC 49030]
          Length = 159

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 10/149 (6%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E  L  D   ++                         VELS+ F     +  L
Sbjct: 1   MSIELGNETELPVDLERVQECARFALDT----------VNVHPAVELSIRFISDDVMSEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           +  + G+   T+V+SFP            MLGDIV++  +   +A   G    + +  L 
Sbjct: 51  HETWMGLPGTTDVMSFPMDELKPGHDEPGMLGDIVISPTVAAEQAAAAGHSMSDEIYLLT 110

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +HG LHLLGYDH +      M  L+R +L
Sbjct: 111 VHGILHLLGYDHGEPDQKSEMFALQRKLL 139


>gi|45657953|ref|YP_002039.1| hypothetical protein LIC12105 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|62901441|sp|Q72QK8|RRMF_LEPIC RecName: Full=Probable rRNA maturation factor
 gi|45601194|gb|AAS70676.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 141

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 15/128 (11%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA--------------SSDG 95
           + ++  ELSL+      ++ +N   RG DK T+VLSFP  F                   
Sbjct: 11  LNDSECELSLLLVGDSDMKEINRLRRGKDKTTDVLSFPLEFDFSPLQKILPKNTSSDQKM 70

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGL 154
              + LG+IV++ + ++ +A  +G   ++    L++HGFLHLLGYDH   DK+  +M+  
Sbjct: 71  FPPVALGEIVISIDTLQKQAKEIGHSEKDEFYRLLVHGFLHLLGYDHERGDKEEHIMKLK 130

Query: 155 ERSILEDL 162
           E   LE L
Sbjct: 131 EDECLEIL 138


>gi|297622689|ref|YP_003704123.1| hypothetical protein Trad_0443 [Truepera radiovictrix DSM 17093]
 gi|297163869|gb|ADI13580.1| protein of unknown function UPF0054 [Truepera radiovictrix DSM
           17093]
          Length = 147

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 2/134 (1%)

Query: 26  IHLRTLCEVVFAKAVSNLI-SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           I +       F K +  ++ +    +     EL++V  D  +I  LN  +RG D PT+VL
Sbjct: 2   IEILAERPYPFRKRLQAVVTALKAELGAGDKELTIVLVDDPKIRELNRAHRGEDAPTDVL 61

Query: 85  SFPTAFASSDGCSS-LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           S+P A     G      LGDIV++ +    +A   G   E  +V L  HG  HLLG+DH 
Sbjct: 62  SYPLAEPDDAGFPEVPHLGDIVISLDTAARQAAAQGHTLELEVVTLAAHGLTHLLGFDHP 121

Query: 144 DDKDACVMEGLERS 157
            ++        +  
Sbjct: 122 TEEAWTTFRQNQAR 135


>gi|24214384|ref|NP_711865.1| putative metal-dependent hydrolase [Leptospira interrogans serovar
           Lai str. 56601]
 gi|46577486|sp|Q8F5J7|RRMF_LEPIN RecName: Full=Probable rRNA maturation factor
 gi|24195321|gb|AAN48883.1| predicted metal-dependent hydrolase [Leptospira interrogans serovar
           Lai str. 56601]
          Length = 141

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 15/128 (11%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA--------------SSDG 95
           + ++  ELSL+      ++ +N   RG DK T+VLSFP  F                   
Sbjct: 11  LNDSECELSLLLVGDSDMKEINRLRRGKDKTTDVLSFPLEFDFSPLQKILPKNTSSDQKM 70

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGL 154
              + LG+IV++ + ++ +A  +G   ++    L++HGFLHLLGYDH   DK+  +M+  
Sbjct: 71  FPPIALGEIVISIDTLQKQAKEIGHSEKDEFYRLLVHGFLHLLGYDHERGDKEEHIMKLK 130

Query: 155 ERSILEDL 162
           E   LE L
Sbjct: 131 EDECLEIL 138


>gi|149546328|ref|XP_001514071.1| PREDICTED: similar to C21orf57 isoform A protein [Ornithorhynchus
           anatinus]
          Length = 165

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 10/140 (7%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-- 88
           +  V   + +  L      +     +L +V  D+  I+ +N  YR  + PT+VLSFP   
Sbjct: 14  IRRVPLRQKIETL---RRILGVRRFDLGIVCVDNKNIQRVNNTYRQKNVPTDVLSFPFHE 70

Query: 89  -----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                            LGD+ L  E I  +     ++F   L  +  HG  HLLGY H 
Sbjct: 71  NLKAGEMPQPRFPEDYNLGDVFLGVEYIFQQCQEGNEDFYGVLTVIAAHGLCHLLGYRHD 130

Query: 144 DDKDACVMEGLERSILEDLG 163
            + +   M   E+ IL++L 
Sbjct: 131 TEAEWQEMYQKEKHILDELN 150


>gi|183601565|ref|ZP_02962935.1| hypothetical protein BIFLAC_02897 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683900|ref|YP_002470283.1| metalloprotease [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190936|ref|YP_002968330.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196342|ref|YP_002969897.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|254800500|sp|B8DUM8|RRMF_BIFA0 RecName: Full=Probable rRNA maturation factor
 gi|183219171|gb|EDT89812.1| hypothetical protein BIFLAC_02897 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621550|gb|ACL29707.1| conserved hypothetical protein [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249328|gb|ACS46268.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250896|gb|ACS47835.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793925|gb|ADG33460.1| putative metalloprotease [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 181

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIE 112
           EL++ F D   I  L+  +  +  PT+V+SFP               MLGDIV+   + +
Sbjct: 36  ELTITFVDPEPIAELHERWMDLQGPTDVMSFPMDELRPGDERNEPEGMLGDIVICPWVAQ 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +    M GL+R +L
Sbjct: 96  QQAQAAGHSTMEEMMLLTIHGVLHLLGYDHHTREQERQMFGLQRQLL 142


>gi|146321259|ref|YP_001200970.1| metalloprotease [Streptococcus suis 98HAH33]
 gi|223932648|ref|ZP_03624647.1| protein of unknown function UPF0054 [Streptococcus suis 89/1591]
 gi|253752116|ref|YP_003025257.1| hypothetical protein SSUSC84_1260 [Streptococcus suis SC84]
 gi|253753941|ref|YP_003027082.1| hypothetical protein SSU1227 [Streptococcus suis P1/7]
 gi|253755184|ref|YP_003028324.1| hypothetical protein SSUBM407_0562 [Streptococcus suis BM407]
 gi|330832406|ref|YP_004401231.1| putative metalloprotease [Streptococcus suis ST3]
 gi|166231363|sp|A4W2I1|RRMF_STRS2 RecName: Full=Probable rRNA maturation factor
 gi|145692065|gb|ABP92570.1| hypothetical protein SSU98_1412 [Streptococcus suis 98HAH33]
 gi|223898618|gb|EEF64980.1| protein of unknown function UPF0054 [Streptococcus suis 89/1591]
 gi|251816405|emb|CAZ52036.1| conserved hypothetical protein [Streptococcus suis SC84]
 gi|251817648|emb|CAZ55396.1| conserved hypothetical protein [Streptococcus suis BM407]
 gi|251820187|emb|CAR46557.1| conserved hypothetical protein [Streptococcus suis P1/7]
 gi|292558698|gb|ADE31699.1| hypothetical protein SSGZ1_1242 [Streptococcus suis GZ1]
 gi|319758492|gb|ADV70434.1| putative metalloprotease [Streptococcus suis JS14]
 gi|329306629|gb|AEB81045.1| putative metalloprotease [Streptococcus suis ST3]
          Length = 165

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 17/146 (11%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AF 90
            +    L      + +   E+++ F D+ R+  +N EYRGID+PT+V+S          F
Sbjct: 18  EQITELLQFAAEKIGKQNKEMAVTFVDNKRVHEVNLEYRGIDRPTDVVSLEYKPESEIVF 77

Query: 91  ASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
              D   +  L           G++ ++ +    +A   G  +E  +  L +HGFLH+ G
Sbjct: 78  DEEDLLDNPELAEMMEDFDAYIGELYISIDKAREQAEDYGHSYEREMGFLAVHGFLHING 137

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YDH   ++   M GL+  IL   G+ 
Sbjct: 138 YDHYTPEEEAEMFGLQEEILTAYGLT 163


>gi|51245457|ref|YP_065341.1| pyridoxal phosphate biosynthetic protein [Desulfotalea psychrophila
           LSv54]
 gi|50876494|emb|CAG36334.1| probable pyridoxal phosphate biosynthetic protein [Desulfotalea
           psychrophila LSv54]
          Length = 393

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 4/113 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIEI 113
           L++VF    ++   N  YR    PTNVLSFP A  S +    +    LGDI+++ +    
Sbjct: 37  LNIVFVSDAQMTWFNEHYREKKGPTNVLSFPFAEGSEEFLQQIPVHELGDIIISVDTAMR 96

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILEDLGIN 165
           EA   G+   + L  L++HG LHL+GYDH    +DA +ME  E+ +L++  IN
Sbjct: 97  EAIEYGQTISHRLNWLMVHGILHLVGYDHERGPEDALLMEDKEQVLLKEYAIN 149


>gi|255027003|ref|ZP_05298989.1| putative metalloprotease [Listeria monocytogenes FSL J2-003]
          Length = 138

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 18/143 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L++ +  E     DE   + L E +         +  Y   E   ELSL FT +  I  +
Sbjct: 4   LEIDLLDETKNLLDED--KQLVENILQ------FAAEYLKIEQGTELSLTFTTNEGIREI 55

Query: 71  NFEYRGIDKPTNVLSFPTAF----------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           N EYR  D+ T+V+SF                 D  +  MLGDI+++ E  E +A   G 
Sbjct: 56  NREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGH 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHV 143
                L  L +HG LHLLGYDH+
Sbjct: 116 TKARELGFLAVHGLLHLLGYDHM 138


>gi|197303388|ref|ZP_03168427.1| hypothetical protein RUMLAC_02110 [Ruminococcus lactaris ATCC
           29176]
 gi|197297386|gb|EDY31947.1| hypothetical protein RUMLAC_02110 [Ruminococcus lactaris ATCC
           29176]
          Length = 165

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 16/138 (11%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG-------- 95
            +  Y       E++L+ T++  I  +N E RGID+PT+VLSFP     + G        
Sbjct: 27  AALDYAECPYEAEINLLLTENQEIHEMNLEQRGIDRPTDVLSFPMIEYDAPGDFSVIDEE 86

Query: 96  --------CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                      LMLGDIV++ E +  +A   G   +     LI H  LHL GYDH+++++
Sbjct: 87  TGDAFNPETGELMLGDIVISKEKVLSQAEEYGHSPKREYAFLIAHSMLHLFGYDHMEEEE 146

Query: 148 ACVMEGLERSILEDLGIN 165
              ME  +R+I+E +GI 
Sbjct: 147 RAEMEAHQRAIMEKVGIP 164


>gi|145572767|sp|A2BUF9|RRMF_PROM5 RecName: Full=Probable rRNA maturation factor
          Length = 180

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +  E++ W + +    LC +    +  N     +   + I  LSL   +++ I ++N ++
Sbjct: 34  LIFESSFWEEVL----LCWINIILSEKNTSFPNFIFDKKIFSLSLQIINNNEISSINQKW 89

Query: 75  RGIDKPTNVLSFPT--AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                PT+VLSFP      ++   + + LGD+ ++ E+   ++       +  ++ L  H
Sbjct: 90  MDKSGPTDVLSFPMISDEDTTKNLNFIELGDLFISLEMAFQQSLEFDHSIKKEMLWLASH 149

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           GFLHLLG++H DD +   M   +  ++  L
Sbjct: 150 GFLHLLGWEHNDDNELDNMLNFQEYLISKL 179


>gi|124024971|ref|YP_001014087.1| metal-dependent hydrolase [Prochlorococcus marinus str. NATL1A]
 gi|123960039|gb|ABM74822.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           NATL1A]
          Length = 184

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 7/166 (4%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVV-----FAKAVSNLISKGYFVKENIVELSLV 60
              P  DL + V +       +     E +     F +  S L      +  +   L L 
Sbjct: 18  TPFPVQDLDVFVNSDTLELMKNPSKWIEEIGSWIRFIQVNSALKCPEIVLNSSQFSLGLE 77

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEANVL 118
            T+  +I  LN  + G  K T+VLSFP    +  G     + LGDIV++      +A   
Sbjct: 78  LTNDKKILDLNHAWLGQSKTTDVLSFPIIDETFFGVSNECIELGDIVISVPTAIRQAKDN 137

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
             +    L  L  HG LHLLG+DH D++    M  ++  +L+  GI
Sbjct: 138 NADLFRELRWLATHGLLHLLGWDHSDEESLNKMLLIQEQLLDIRGI 183


>gi|291456691|ref|ZP_06596081.1| putative metalloprotease [Bifidobacterium breve DSM 20213]
 gi|291381968|gb|EFE89486.1| putative metalloprotease [Bifidobacterium breve DSM 20213]
          Length = 183

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP               +LGDIV+   +  
Sbjct: 36  DLTIMFVDPDPIAELHMRWMSLEGPTDVMSFPMDELRPGDGKTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQAAAAGHSTMQEMLLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|166031812|ref|ZP_02234641.1| hypothetical protein DORFOR_01513 [Dorea formicigenerans ATCC
           27755]
 gi|166028265|gb|EDR47022.1| hypothetical protein DORFOR_01513 [Dorea formicigenerans ATCC
           27755]
          Length = 164

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 17/154 (11%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L   C+ +  + ++  +   Y      V+++L+ T +  I  +N ++R ID+ T+VLS
Sbjct: 11  LKLPFDCQALAREVINGAL--EYIHCPYEVQVNLLLTMNDEIHEMNRDFRNIDRATDVLS 68

Query: 86  FPTAFAS---------------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           FP                          L+LGDIV++ E +  +A   G   +     LI
Sbjct: 69  FPMLEYETPGDFSHFESEEDCFDPETGELLLGDIVISKEKVIAQAEEYGHSVKREYAFLI 128

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            H  LHL GYDH+++++   ME L+R IL +L I
Sbjct: 129 AHSVLHLSGYDHMEEEERIEMETLQREILNELNI 162


>gi|291296194|ref|YP_003507592.1| hypothetical protein Mrub_1814 [Meiothermus ruber DSM 1279]
 gi|290471153|gb|ADD28572.1| protein of unknown function UPF0054 [Meiothermus ruber DSM 1279]
          Length = 140

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           L+L+ T+ + I  L  ++ G D PT+VLSFPT +   D      LGDIV++ +    +A 
Sbjct: 37  LTLILTNDNEIRALKQQHWGEDAPTDVLSFPT-YEPGDPFIPPHLGDIVISLDTARRQAE 95

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            LG   ++ +  L  H   HLLG+DH  + +      ++  ILE
Sbjct: 96  QLGHSLQHEVKVLAAHSLWHLLGHDHRSETEWEGFRRVQARILE 139


>gi|116004463|ref|NP_001070588.1| rRNA maturation factor homolog [Bos taurus]
 gi|81673818|gb|AAI09796.1| Hypothetical protein MGC134244 [Bos taurus]
 gi|296490846|gb|DAA32959.1| hypothetical protein LOC768063 [Bos taurus]
          Length = 164

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIVLAYE 109
           L +V  D+ +I+ +N  YR  D PT+VLSFP             D      LGDI L  E
Sbjct: 37  LGVVCVDNRKIQQMNRIYREQDTPTDVLSFPFHENLKAGEIPQPDFPDDYNLGDIFLGVE 96

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
            I  +     +++ + L     HG  HLLG+ H  + +   M   E+ +L++L 
Sbjct: 97  FIFQQCKE-DEDYYDILTVTATHGLCHLLGFTHSTEAEWQKMYQKEKQVLQELN 149


>gi|317968159|ref|ZP_07969549.1| metal-dependent hydrolase [Synechococcus sp. CB0205]
          Length = 187

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 28/177 (15%)

Query: 12  DLQIAVENALWGDEIHLRTLCEV--------VFAKAVSNLISK-----GYFVKENIVELS 58
           DL +A E      E  + T  E+         +   ++  +S+        ++     L 
Sbjct: 6   DLDLAFEAVEDLPEALVETAAELCDPIQGIEPWHALINGWLSQLKGELPEPLQAPAYSLG 65

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---------------LGD 103
           L   +   I  LN ++R  +  T+VL+F       D   ++                LGD
Sbjct: 66  LSLVNDEEIAALNSDWRDKEGATDVLAFAAQDDGLDDAPAIPMPDFDGEEGLLDALELGD 125

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           IV++ E    +A   G      L+ L  HG LHLLG+DH DD     M   ++ +L 
Sbjct: 126 IVISVETAARQAPEHGHNLREELLFLATHGLLHLLGWDHPDDASLEAMLQRQQQLLA 182


>gi|145572770|sp|A0LK95|RRMF_SYNFM RecName: Full=Probable rRNA maturation factor
          Length = 159

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 1/111 (0%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
             ELS++  D   +  LN  YR  D  T+VLSFP            +LGD+V+   + + 
Sbjct: 35  DAELSILIVDDEEMAGLNSTYRRKDTSTDVLSFPMREGEFGDVCEEVLGDVVICAPMAKR 94

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLG 163
              + G  F++ +  L++HG LHL+G+DH     +A  M      +L+ LG
Sbjct: 95  MGELHGASFQSVMDLLLVHGILHLVGHDHEQGRGEAARMADKTMELLKMLG 145


>gi|312880027|ref|ZP_07739827.1| protein of unknown function UPF0054 [Aminomonas paucivorans DSM
           12260]
 gi|310783318|gb|EFQ23716.1| protein of unknown function UPF0054 [Aminomonas paucivorans DSM
           12260]
          Length = 171

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 6/134 (4%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           L+     V+A+ +    +     +    E+S+ F D + +  LN  YR ++ PT+VLSFP
Sbjct: 24  LQDRIRCVWARLLLAEGTLPSGEETREAEVSVSFVDPNSMAELNRTYRQVEGPTDVLSFP 83

Query: 88  TAFASSDGCSSL----MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
                   C        LGD+V+  + +  +    G   E  ++ ++ HGFLHLLG+DH 
Sbjct: 84  LWEEEGRFCPPPWEVLPLGDVVICPDQV--QPQEGGGSKERQMLLVLHHGFLHLLGWDHD 141

Query: 144 DDKDACVMEGLERS 157
             +    M  L+  
Sbjct: 142 TPQKEQDMWELQER 155


>gi|313678249|ref|YP_004055989.1| hypothetical protein MBOVPG45_0124 [Mycoplasma bovis PG45]
 gi|312950195|gb|ADR24790.1| conserved hypothetical protein TIGR00043 [Mycoplasma bovis PG45]
          Length = 152

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 1/123 (0%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-DGCSSLMLG 102
           +   + +    + + +   ++ +I+ LN +YR  D  T++LSF     S       L LG
Sbjct: 27  LQSYFKLDSKEISVDVSIVNNRKIKKLNKQYRQKDYATDILSFDFGDKSLYKDMPFLPLG 86

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           ++V+++E +E +A   G        +L  HG +HL+GYDH  + +   M  +  +I + L
Sbjct: 87  ELVISHEKVEEQAKEFGHSLRREYCYLYAHGLIHLMGYDHELEDERVAMNMMVDAIFDPL 146

Query: 163 GIN 165
            I 
Sbjct: 147 NIT 149


>gi|167946144|ref|ZP_02533218.1| hypothetical protein Epers_06212 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 100

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 59  LVFTDSHRIE-TLNFEYRGIDKPTNVLSFPTAFASSDGCS--SLMLGDIVLAYEIIEIEA 115
           +   D    + T   +YRG D+PTNVLSFP              +LGD+V+   ++  EA
Sbjct: 2   IRIVDEAESQGTEXRDYRGKDRPTNVLSFPFETPPELPAEAAGNLLGDLVICAPVVAREA 61

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
              GK   +H +H+++HG LHL G DH +D +A +M G
Sbjct: 62  AAQGKSPISHWIHMVVHGVLHLQGLDHQNDAEAGIMRG 99


>gi|225715688|gb|ACO13690.1| metalloprotease C21orf57 [Esox lucius]
          Length = 168

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 7/144 (4%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +L+ +  +  A+   ++ +  + +     +L ++  D+ +I+ +N  YR  + PT+VLSF
Sbjct: 7   NLQNVVPLRRARLRKDVETLRHILGIQKFDLGVICVDNRKIQRINNIYRKNNSPTDVLSF 66

Query: 87  PTAFASSDGCSSLML-------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           P       G     L       GDI L  E +  +     ++    L  +  HG  HLLG
Sbjct: 67  PFYEELRPGKLPCPLHRDEQNLGDIFLGVEYLMKQCQQESQDLHETLTSVTAHGICHLLG 126

Query: 140 YDHVDDKDACVMEGLERSILEDLG 163
           Y H  +++   M   E  IL +  
Sbjct: 127 YRHETEEEWKEMLQKESYILNEFN 150


>gi|254526914|ref|ZP_05138966.1| hypothetical protein P9202_1567 [Prochlorococcus marinus str. MIT
           9202]
 gi|221538338|gb|EEE40791.1| hypothetical protein P9202_1567 [Prochlorococcus marinus str. MIT
           9202]
          Length = 179

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 5/149 (3%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           +  E+  W  +    +   ++  K    L    Y  ++    L L    +  I +LN ++
Sbjct: 34  LIFESIFW--KKIFLSWINIILKKKDYEL--PNYIFEKKSFSLGLQIISNQEIASLNMKW 89

Query: 75  RGIDKPTNVLSFPTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
              + PT+VLSFP     S +    + LGDI +++E+   ++          ++ L  HG
Sbjct: 90  MQKNGPTDVLSFPIISDESLNNLDHIELGDIFISFEMALEQSYEYKHSIYREMIWLASHG 149

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDL 162
           FLHLLG++H ++ D   M   +  ++  L
Sbjct: 150 FLHLLGWEHNNENDLENMLNFQEYLITRL 178


>gi|118475619|ref|YP_891672.1| putative metalloprotease [Campylobacter fetus subsp. fetus 82-40]
 gi|145558830|sp|A0RN89|RRMF_CAMFF RecName: Full=Probable rRNA maturation factor
 gi|28974225|gb|AAO64226.1| hypothetical protein Cf0020 [Campylobacter fetus]
 gi|118414845|gb|ABK83265.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
           82-40]
          Length = 134

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 7/111 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+ LVF  +  +  +N + RG+DK T+VLSFP  +          +G IV+  ++   +
Sbjct: 22  AEVELVFVSNEEMREINRDKRGMDKTTDVLSFPLTY-----VPHFPIGSIVINTDLASSK 76

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           A  LG   ++ +  L  HG LH+LG+DH +D     M   E SI+E +G+ 
Sbjct: 77  ALELGHSTDDEIALLFTHGLLHILGFDHENDD--GEMRRKEISIMEHMGLP 125


>gi|269115217|ref|YP_003302980.1| hypothetical protein MHO_4420 [Mycoplasma hominis]
 gi|268322842|emb|CAX37577.1| Conserved hypothetical protein [Mycoplasma hominis ATCC 23114]
          Length = 150

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 67/140 (47%), Gaps = 3/140 (2%)

Query: 29  RTLCEVVFAKAVSNLI--SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           ++     F K   +++  SK  F  +  + + ++F  + +++ LN  +R  +  T++LSF
Sbjct: 9   QSFHRFNFMKDFLDILEESKIEFGAKKSLCVDVMFVTAKKMKKLNNLHRQKNYTTDILSF 68

Query: 87  PTAFASS-DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           P       +    + LG I+++   I+ +A            ++  HG  HL G+DH+ +
Sbjct: 69  PLDSQEELNFLDEIELGQIIISPWKIKKQAKEFNHSLRREFCYIFAHGIAHLFGFDHITE 128

Query: 146 KDACVMEGLERSILEDLGIN 165
           ++A +M G   +I+  L I 
Sbjct: 129 EEAKIMNGHVDNIMNKLNIK 148


>gi|320450010|ref|YP_004202106.1| hypothetical protein TSC_c09320 [Thermus scotoductus SA-01]
 gi|320150179|gb|ADW21557.1| conserved hypothetical protein [Thermus scotoductus SA-01]
          Length = 138

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             +A+S L+ +     +    ++++ T   RI  L  E+ G D+ T+VLSFP  +   D 
Sbjct: 17  LRRALSALMEELGVGDKA---VTVILTGDRRIRVLKREWWGEDEATDVLSFP-HYEPGDP 72

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                LGDI ++ +  + +A   G   E  ++ L  HG  HLLG+DH  ++D      ++
Sbjct: 73  FVPPHLGDIWISLDTAKRQAEERGVPLEEEVLVLAAHGLWHLLGHDHQKEEDWEGFHRVQ 132

Query: 156 RSILE 160
             IL 
Sbjct: 133 ERILA 137


>gi|126314349|ref|XP_001365786.1| PREDICTED: similar to C21orf57 isoform A protein [Monodelphis
           domestica]
          Length = 166

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLM 100
           + +     +L +V  D+  I+ LN  YR    PT+VLSFP             +    L 
Sbjct: 28  HILGIRRFDLGVVCVDNQGIQRLNRIYRQAHGPTDVLSFPFHEDLRAGAVPQPECPDDLN 87

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LGDI L  E I  +    G+ + + L     HG  HLLGY H    +   M   E+  LE
Sbjct: 88  LGDIFLGVEYIFHQCQENGENYYDILTVTAAHGLCHLLGYKHNTAAEWREMFQKEKLTLE 147

Query: 161 DLG 163
           +L 
Sbjct: 148 ELN 150


>gi|224418521|ref|ZP_03656527.1| putative metalloprotease [Helicobacter canadensis MIT 98-5491]
 gi|253826924|ref|ZP_04869809.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313142048|ref|ZP_07804241.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510330|gb|EES88989.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131079|gb|EFR48696.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 152

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 14/139 (10%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            L    E VF K + +L      +K    EL  +  D+  I+ LN  +R  DKPT+VLSF
Sbjct: 18  DLFLFLEKVFDKILLDL-----GLKNKQCEL--LLVDNPTIQNLNKIHRNKDKPTDVLSF 70

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           P      +   S +LG IV++ + I+  +        + +  L IHG LHLLG+DH  +K
Sbjct: 71  PL-----ESDFSPLLGSIVISLDFIKQNSEKYHHTPNDEMALLFIHGILHLLGFDH--EK 123

Query: 147 DACVMEGLERSILEDLGIN 165
           D       E+ +++   + 
Sbjct: 124 DRGEQRQKEKELIDFFHLP 142


>gi|332296322|ref|YP_004438245.1| metalloprotease ybeY [Thermodesulfobium narugense DSM 14796]
 gi|332179425|gb|AEE15114.1| metalloprotease ybeY [Thermodesulfobium narugense DSM 14796]
          Length = 149

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 16/143 (11%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R   ++ + K    +     F+     ELSL+ TD++ I  LN E+R  D PT+VLSF  
Sbjct: 8   RKRYKLNYIKLKKAIKESMNFLGVGDCELSLLLTDNNEIRILNKEFRKSDCPTDVLSF-- 65

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIE----------ANVLGKEFENHLVHLIIHGFLHLL 138
                   +  +LGDIV++ E    +            V  K FE++L+ L+IHG LH L
Sbjct: 66  ----EGDMNLGVLGDIVISVERAREDFVSGSYGEIIPEVAKKNFESYLLWLVIHGILHNL 121

Query: 139 GYDHVDDKDACVMEGLERSILED 161
           G+DH DD     M   ER  LE 
Sbjct: 122 GFDHNDDVSERKMRSKERDCLEK 144


>gi|57239608|ref|YP_180744.1| hypothetical protein Erum8820 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579597|ref|YP_197809.1| hypothetical protein ERWE_CDS_09330 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|62901161|sp|Q5HA01|RRMF_EHRRW RecName: Full=Probable rRNA maturation factor
 gi|57161687|emb|CAH58617.1| conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418223|emb|CAI27427.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 157

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 8/156 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I V    W   I    +    F K V         + E    +S+V  ++  ++ LN+
Sbjct: 2   IEINVYYKKWYSTIKKPKI----FVKNVIKSSLINLNIYEYKPIISIVLANNILLQKLNY 57

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           EYR  +KPTNVLSFP             LG+I L+ + +  E+  L    E+H  H++IH
Sbjct: 58  EYRNKNKPTNVLSFPY----DKLNKKCNLGEIFLSLDTLIQESIDLNIPIEHHTCHMLIH 113

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LH+L Y+H +     +ME +E  +L+ LGI +PY
Sbjct: 114 GLLHILDYNHEEPLMQYIMESIEIKLLDKLGIRNPY 149


>gi|315226507|ref|ZP_07868295.1| metalloprotease [Parascardovia denticolens DSM 10105]
 gi|315120639|gb|EFT83771.1| metalloprotease [Parascardovia denticolens DSM 10105]
          Length = 175

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + R+ + I  E     + +    L      +   +  S          +LS+ F D   +
Sbjct: 1   MDRMSVDITNETEWGINPLVFSDLAVWTMDQMRVSTES----------DLSIAFIDPAPM 50

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
             L+  +  ++ PT+V+SFP               MLGDI+L  E+   +A   G     
Sbjct: 51  AELHLRWMNLEGPTDVMSFPMDELRPGTETDRDEGMLGDIILCPEVAADQAAAAGHSTIE 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            ++ L IHG LHLLGYDH   +D   M G++R +L
Sbjct: 111 EMMLLTIHGVLHLLGYDHATPEDEKRMFGIQRQLL 145


>gi|15639637|ref|NP_219087.1| putative metalloprotease [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025875|ref|YP_001933647.1| metalloprotease [Treponema pallidum subsp. pallidum SS14]
 gi|6686126|sp|O83656|RRMF_TREPA RecName: Full=Probable rRNA maturation factor
 gi|238689336|sp|B2S3N9|RRMF_TREPS RecName: Full=Probable rRNA maturation factor
 gi|3322948|gb|AAC65623.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018450|gb|ACD71068.1| hypothetical protein TPASS_0650 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060019|gb|ADD72754.1| putative metalloprotease [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 160

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL--MLGDIVLAYEIIEI 113
           +LS+V      I  LN++YRGID PT+VLSF       D   +   + GDI+++ E +  
Sbjct: 40  DLSIVCCTDAFIRRLNYDYRGIDSPTDVLSFENDGEYCDDAGTRFFLAGDIIISLESVRE 99

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            +             ++IHG LHL G DH D+     M  L+  IL  
Sbjct: 100 NSERFHVAAHEEFKRVLIHGILHLSGMDHQDNSPGQEMLRLQERILAQ 147


>gi|303232221|ref|ZP_07318920.1| translation metalloprotein YbeY [Atopobium vaginae PB189-T1-4]
 gi|302481631|gb|EFL44692.1| translation metalloprotein YbeY [Atopobium vaginae PB189-T1-4]
          Length = 208

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 3/115 (2%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC---SSLMLGDIVLAY 108
                +S+       I  +N E+RG DKPT+V+S                  LGDI+LA 
Sbjct: 76  ARPCTISISIVTIDHIHDINREFRGQDKPTDVISIECERPDDPSLAAGEPCELGDIILAS 135

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           E I  +A+  G + ++    L+IH  LHLLGYDH++D DA VME LE  +L ++G
Sbjct: 136 EYIAHQADDFGMDHQDECRLLLIHAMLHLLGYDHLNDADAEVMEALEDRLLIEVG 190


>gi|58617651|ref|YP_196850.1| hypothetical protein ERGA_CDS_09240 [Ehrlichia ruminantium str.
           Gardel]
 gi|62901147|sp|Q5FGP9|RRMF_EHRRG RecName: Full=Probable rRNA maturation factor
 gi|58417263|emb|CAI28376.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 157

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 8/156 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I V    W   I    +    F K V         + E    +S+V  ++  ++ LN+
Sbjct: 2   IEINVYYKKWYSTIKKPKI----FVKNVIKSSLINLNIYEYKPIISIVLANNILLQKLNY 57

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           EYR  +KPTNVLSFP             LG+I L+ + +  E+  L    E+H  H++IH
Sbjct: 58  EYRNKNKPTNVLSFPY----DKLNKKCNLGEIFLSLDTLIEESIDLNIPIEHHTCHMLIH 113

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LH+L Y+H +     +ME +E  +L+ LGI +PY
Sbjct: 114 GLLHILDYNHEEPLMQYIMESIEIKLLDKLGIRNPY 149


>gi|146319053|ref|YP_001198765.1| metalloprotease [Streptococcus suis 05ZYH33]
 gi|166200391|sp|A4VW76|RRMF_STRSY RecName: Full=Probable rRNA maturation factor
 gi|145689859|gb|ABP90365.1| hypothetical protein SSU05_1399 [Streptococcus suis 05ZYH33]
          Length = 165

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 17/146 (11%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT------AF 90
            +    L      + +   E+++ F D+ R+  +N EYRGID+PT+V+S          F
Sbjct: 18  EQITELLQFAAEKIGKQNKEMAVTFVDNKRVHEVNLEYRGIDRPTDVVSLEYKPESEIVF 77

Query: 91  ASSDGCSSLML-----------GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
              D   +  L           G++ ++ +    +A   G  +E  +  L +HGFLH+ G
Sbjct: 78  DEEDLLDNPELAEMMEDFDAYIGELYISIDKAREQAEDYGHSYEREMGFLAVHGFLHING 137

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YDH   ++   M GL+  IL   G+ 
Sbjct: 138 YDHYTPEEEAEMLGLQEEILTAYGLT 163


>gi|46198991|ref|YP_004658.1| metal-binding protein [Thermus thermophilus HB27]
 gi|55981014|ref|YP_144311.1| hypothetical protein TTHA1045 [Thermus thermophilus HB8]
 gi|62901332|sp|Q72JT5|RRMF_THET2 RecName: Full=Probable rRNA maturation factor
 gi|62901421|sp|Q5SJG3|RRMF_THET8 RecName: Full=Probable rRNA maturation factor
 gi|46196615|gb|AAS81031.1| hypothetical conserved metal-binding protein [Thermus thermophilus
           HB27]
 gi|55772427|dbj|BAD70868.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 139

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             +A++ L+ +     +    ++++ T   R+  L  E+ G D+ T+VLSFP  +   D 
Sbjct: 18  LRRALAALMEELGVGDKG---VTVILTGDRRLRALKREWWGEDEATDVLSFP-HYEPGDP 73

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                LGDI ++ +    +A   G   E  ++ L  HG  HLLG+DH  ++D      ++
Sbjct: 74  FVPPHLGDIWISLDTARRQAEARGASLEEEVLVLAAHGLWHLLGHDHQKEEDWEGFRRVQ 133

Query: 156 RSILE 160
             IL 
Sbjct: 134 ERILA 138


>gi|330994668|ref|ZP_08318591.1| Putative metalloprotease [Gluconacetobacter sp. SXCC-1]
 gi|329758309|gb|EGG74830.1| Putative metalloprotease [Gluconacetobacter sp. SXCC-1]
          Length = 170

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 14  QIAVENALWGDEI-HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
            I V +  W   +   R L       A++     G         +++V  D   +  +N+
Sbjct: 12  DITVADRRWNRAVRQPRHLVTRAVDAALAATGRYGP--------VTVVLADDRTVRHMNW 63

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            +RG ++PTNVL+F   +A+      L  GDI++A+E +  EA   G+    HL HL++H
Sbjct: 64  RHRGRNRPTNVLTF--EYAAPHAPGGLWGGDIIIAFETLAREARAAGRSMAAHLAHLVVH 121

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170
           G LHL  YDH    +A  ME  E  IL  LG  +P++ 
Sbjct: 122 GVLHLAQYDHHHPGEAREMEMEEARILSTLGFANPWKA 159


>gi|160902312|ref|YP_001567893.1| hypothetical protein Pmob_0846 [Petrotoga mobilis SJ95]
 gi|189040617|sp|A9BHG1|RRMF_PETMO RecName: Full=Probable rRNA maturation factor
 gi|160359956|gb|ABX31570.1| protein of unknown function UPF0054 [Petrotoga mobilis SJ95]
          Length = 143

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 15/151 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++I V N     EI+ + + ++   K + N + KG F      EL+++ TD   I   N 
Sbjct: 1   MKINVINQQELREINSKKIKDIA-KKVLLNEVGKGNF------ELNILITDDKSITEFNK 53

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            YRG   PT+VLSF        G S  ++GDIV++ E IE +A   G  FE    +++IH
Sbjct: 54  -YRGKSTPTDVLSFSY------GLSEPVIGDIVISVESIEKQAPDFGNSFEEEFYYILIH 106

Query: 133 GFLHLLGYDHVD-DKDACVMEGLERSILEDL 162
           G LH++GYDH + ++DA  M  ++      L
Sbjct: 107 GLLHIVGYDHENSEEDAKKMFEVQDQYFHQL 137


>gi|294786871|ref|ZP_06752125.1| putative metalloprotease [Parascardovia denticolens F0305]
 gi|294485704|gb|EFG33338.1| putative metalloprotease [Parascardovia denticolens F0305]
          Length = 172

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIE 112
           +LS+ F D   +  L+  +  ++ PT+V+SFP               MLGDI+L  E+  
Sbjct: 36  DLSIAFIDPAPMAELHLRWMNLEGPTDVMSFPMDELRPGTETDRDEGMLGDIILCPEVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH   +D   M G++R +L
Sbjct: 96  DQAAAAGHSTIEEMMLLTIHGVLHLLGYDHATPEDEKRMFGIQRQLL 142


>gi|326432698|gb|EGD78268.1| hypothetical protein PTSG_09333 [Salpingoeca sp. ATCC 50818]
          Length = 180

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 13/157 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+IAVE A         +    +     ++L      ++    ++++ F  + R+  +N 
Sbjct: 2   LRIAVETAG---RTAAPSSVSCLLPSLRAHLKCARELLRVADYDMAVTFVSAERMREINQ 58

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLM-------LGDIVLAYEIIEIEANVLGK-EFEN 124
           +YRG+   T+VLSFP    ++ G    +       LGDI L+ + I  +A        ++
Sbjct: 59  QYRGVGASTDVLSFPFHEVTTPGTLPPVEFEDEKDLGDIFLSLDTI--QAQQTSHLTLQD 116

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            L  +  HG  HLLGYDH    +A  M   ER ILE 
Sbjct: 117 ELKVVATHGLCHLLGYDHDTQANATKMAEKEREILER 153


>gi|152990533|ref|YP_001356255.1| hypothetical protein NIS_0786 [Nitratiruptor sp. SB155-2]
 gi|172048729|sp|A6Q339|RRMF_NITSB RecName: Full=Probable rRNA maturation factor
 gi|151422394|dbj|BAF69898.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 144

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + L+  D  R+ TLN  YR IDK T+VLSFP          +  LG IV+  + +   A 
Sbjct: 34  VELMIVDDERMRTLNKTYRDIDKTTDVLSFPMQE-----IPNAPLGSIVINADKVLHTAK 88

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   ++    L IHG LHLLGYDH  D     M  +E  ++ +  + 
Sbjct: 89  ELGHSAKDEFALLYIHGLLHLLGYDHESDN--GEMRAMEEKLIIEYNLP 135


>gi|194226355|ref|XP_001916890.1| PREDICTED: similar to Putative metalloprotease C21orf57 [Equus
           caballus]
          Length = 164

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP             D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRIYREKNIPTDVLSFPFHENLKAGEIPQPDFPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E+ +LE+L
Sbjct: 93  LGVEYIFQQCKE-NEDYYDILTVTATHGLCHLLGFTHSTEAEWQKMYQKEKQVLEEL 148


>gi|253701857|ref|YP_003023046.1| hypothetical protein GM21_3262 [Geobacter sp. M21]
 gi|251776707|gb|ACT19288.1| protein of unknown function UPF0054 [Geobacter sp. M21]
          Length = 132

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 2/111 (1%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
             ELS+       I  +N +Y G DK TNV+SF          +  +LGD+V++ +    
Sbjct: 16  EAELSISIVGDRAIRIINRDYLGRDKATNVISFAMQEGEFGAINPEVLGDVVISVDTAAR 75

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHV--DDKDACVMEGLERSILEDL 162
           EA   G+ F +    L++HG LH+ GYDH    + +A  ME  ER I   L
Sbjct: 76  EAEEAGEAFLSRFYFLLMHGILHITGYDHERSGEAEAARMEAKEREIFALL 126


>gi|183221474|ref|YP_001839470.1| hypothetical protein LEPBI_I2092 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911561|ref|YP_001963116.1| metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|189039442|sp|B0SB32|RRMF_LEPBA RecName: Full=Probable rRNA maturation factor
 gi|238687827|sp|B0SSV4|RRMF_LEPBP RecName: Full=Probable rRNA maturation factor
 gi|167776237|gb|ABZ94538.1| Metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779896|gb|ABZ98194.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 154

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 2/140 (1%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           W DE +   +           ++        + +ELS+   +   +  +N E RG    T
Sbjct: 11  WNDESNQSEIFSDPVISNCEKILRFLAPEFLHSLELSIYLVNDSLMAEINEERRGKPATT 70

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           +VLSFP  ++        +LG++V++ E  + +A  +G    +    L++HG LH  GYD
Sbjct: 71  DVLSFPL-YSEHPPIPVQILGEVVISMETCKKQAMEIGHGLVDEFYRLLVHGILHNFGYD 129

Query: 142 HVD-DKDACVMEGLERSILE 160
           H   ++DA +M  +E   L+
Sbjct: 130 HETNEEDALLMRKMEDECLD 149


>gi|303253550|ref|ZP_07339688.1| hypothetical protein APP2_0738 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302647470|gb|EFL77688.1| hypothetical protein APP2_0738 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 409

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P +DLQIA EN+      +L +L ++      + L  +         E+++   D  
Sbjct: 1   MTTPMIDLQIACENSE-----NLPSLEQLTLWVQ-TALAYEAQTEDFPETEMTIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESH 112

Query: 126 L 126
            
Sbjct: 113 C 113


>gi|195953789|ref|YP_002122079.1| protein of unknown function UPF0054 [Hydrogenobaculum sp. Y04AAS1]
 gi|195933401|gb|ACG58101.1| protein of unknown function UPF0054 [Hydrogenobaculum sp. Y04AAS1]
          Length = 144

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 9/146 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKG-----YFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           ++I+L+T  ++   K +  L+ K       F       L +  T+   I+ LN  YR  D
Sbjct: 2   NKINLKTYKKLEIPKELKYLLKKRASYTLKFFGFKNSMLDIYITNDEEIKHLNSAYRQKD 61

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           KPT+VLSF          +   LG+IV++Y+    +A   G   +  L  L++HG +HL+
Sbjct: 62  KPTDVLSFNINENVG---NVYYLGEIVISYDTALKQAIEYGVSLDQELTRLLVHGIVHLM 118

Query: 139 GYDHVDD-KDACVMEGLERSILEDLG 163
           G+DH    +D  +    + S L    
Sbjct: 119 GHDHETSLEDEKIFFEKQESALAMFN 144


>gi|190150279|ref|YP_001968804.1| hypothetical protein APP7_1010 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307245863|ref|ZP_07527948.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|307254836|ref|ZP_07536662.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307259278|ref|ZP_07541007.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|307263620|ref|ZP_07545232.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
 gi|189915410|gb|ACE61662.1| hypothetical protein APP7_1010 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306853223|gb|EFM85443.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|306862207|gb|EFM94175.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306866645|gb|EFM98504.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|306871043|gb|EFN02775.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
          Length = 409

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P +DLQIA EN+      +L +L ++      + L  +         E+++   D  
Sbjct: 1   MTTPMIDLQIACENSE-----NLPSLEQLTLWVQ-TALAYEAQTEDFPETEMTIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESH 112

Query: 126 L 126
            
Sbjct: 113 C 113


>gi|32035698|ref|ZP_00135586.1| COG1444: Predicted P-loop ATPase fused to an acetyltransferase
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208433|ref|YP_001053658.1| hypothetical protein APL_0957 [Actinobacillus pleuropneumoniae L20]
 gi|126097225|gb|ABN74053.1| hypothetical protein APL_0957 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 409

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 6   VNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           +  P +DLQIA EN+      +L +L ++      + L  +         E+++   D  
Sbjct: 1   MTTPMIDLQIACENSE-----NLPSLEQLTLWVQ-TALAYEAQTEDFPETEMTIRIVDEA 54

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
               LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H
Sbjct: 55  ESHELNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESH 112

Query: 126 L 126
            
Sbjct: 113 C 113


>gi|224054065|ref|XP_002192222.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 164

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
                +AV  L +    +  +  ++ LV   +  ++ LN  YR   +PT+VLSFP    +
Sbjct: 16  RAPLRRAVCALRAA---LGASRFDVGLVCASNALMQRLNGAYRHCPEPTDVLSFPFHQVA 72

Query: 93  SDGCSSL------MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           +             LGDI L  E I  +    G+ F++ L     HG  HLLGY H    
Sbjct: 73  AGELPRPCCRGEYNLGDIFLGVEYIHQQCRETGENFDDVLTVTAAHGLCHLLGYRHDTKP 132

Query: 147 DACVMEGLERSILEDLG 163
           +   M   E  ILE+L 
Sbjct: 133 EWEQMYQKEAQILEELN 149


>gi|116626740|ref|YP_828896.1| hypothetical protein Acid_7712 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|123124469|sp|Q01P09|RRMF_SOLUE RecName: Full=Probable rRNA maturation factor
 gi|116229902|gb|ABJ88611.1| protein of unknown function UPF0054 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 147

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
              LR      FA+ +   ++ G            + T    +  LN ++R  D  T+VL
Sbjct: 15  PATLRRPAIERFARRLQKEVADGAPFDT-------LITGDAELRRLNRDFRKKDYATDVL 67

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SFP+            LGD+ ++      +A   G   E  +  L++HG LHLLG+DH  
Sbjct: 68  SFPS--------GGPGLGDLAISLGRARAQAREFGHTIEQEISILMLHGVLHLLGHDH-- 117

Query: 145 DKDACVMEGLERSILEDLGIN 165
           + D   M  LE+     LG+ 
Sbjct: 118 EVDRGRMASLEKRWRAKLGLP 138


>gi|466970|gb|AAA17156.1| B1937_F1_21 [Mycobacterium leprae]
          Length = 140

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG------CSSLMLGDIVLAYEIIEI 113
           V  D+  +  L+  +  +  PT+V+SFP       G          MLGDIVL  E    
Sbjct: 2   VLLDTAAMADLHMRWMDLPGPTDVMSFPMDEFEPGGRPDAAEPGPSMLGDIVLCPEFAAQ 61

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +A   G    + L  L IHG LHLLGYDH +  +   M  L+  +LE+ 
Sbjct: 62  QAAAEGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQGRLLEEW 110


>gi|134093656|ref|YP_001098731.1| hypothetical protein HEAR0379 [Herminiimonas arsenicoxydans]
 gi|166232645|sp|A4G265|RRMF_HERAR RecName: Full=Probable rRNA maturation factor
 gi|133737559|emb|CAL60602.1| putative metal-dependent hydrolase [Herminiimonas arsenicoxydans]
          Length = 156

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           L   +  K V   +           +++L F D+   + LN  YRG D  TNVL+F    
Sbjct: 21  LTRPLLRKWVKAALLA-------PAQITLRFVDAAEGQILNRNYRGKDYATNVLTFTYND 73

Query: 91  ASSDGCSSLML--GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                 +   +   DI+L  ++++ EA    K    H  HL+IHG LH  GYDH  D++A
Sbjct: 74  DDGSDIADDAVTQADIILCTDVLQREAAEQNKTLIFHAAHLVIHGVLHAQGYDHESDEEA 133

Query: 149 CVMEGLERSILEDLGINDPY 168
             ME LE   L  LG  +PY
Sbjct: 134 EEMEALEIEFLAALGFPNPY 153


>gi|147856469|emb|CAN80775.1| hypothetical protein VITISV_042331 [Vitis vinifera]
          Length = 532

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 26/141 (18%)

Query: 3   VKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFT 62
           +    + RLD+ IA+       ++    L +  +    + +   G F     VELS++  
Sbjct: 108 LNIAEMLRLDVPIAM-------KLAFEGLKDSEYKTRDTTISDLGGF---ENVELSVLLC 157

Query: 63  DSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           +   I  LN E+R  D  T+                LMLGDIV++ E    +A   G   
Sbjct: 158 NDEFIRKLNKEWRDEDHATD----------------LMLGDIVISVETAARQAEERGHTL 201

Query: 123 ENHLVHLIIHGFLHLLGYDHV 143
            + +  L++HG LHLLG+DH 
Sbjct: 202 LDEIRILMVHGLLHLLGFDHE 222


>gi|139439607|ref|ZP_01773020.1| Hypothetical protein COLAER_02047 [Collinsella aerofaciens ATCC
           25986]
 gi|133774948|gb|EBA38768.1| Hypothetical protein COLAER_02047 [Collinsella aerofaciens ATCC
           25986]
          Length = 121

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 3/102 (2%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCS---SLMLGDIVLAYEIIEIEANVLGKEFE 123
           +  LN E+RGID+ T+VLSF    A  +      +L LGDI+LA ++I  +A   G    
Sbjct: 1   MHELNHEWRGIDRTTDVLSFECDSAFDEDIPADETLELGDIILAPQVIARQAPGFGNSPA 60

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +    +++HG LHLLGYDH++D +A VME  E +IL DL + 
Sbjct: 61  DECRLMLVHGMLHLLGYDHIEDDEAEVMEAREDAILRDLALE 102


>gi|218296577|ref|ZP_03497305.1| protein of unknown function UPF0054 [Thermus aquaticus Y51MC23]
 gi|218243119|gb|EED09651.1| protein of unknown function UPF0054 [Thermus aquaticus Y51MC23]
          Length = 139

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             +A+S L+ +     +    ++++ T   RI  L   + G D+ T+VLSFP  +   D 
Sbjct: 18  LRRALSALMEELGVGDKA---VTVILTGDRRIRALKRAWWGEDEATDVLSFP-HYEPGDP 73

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                LGDI ++ +    +A   G   E  ++ L  HG  HLLG+DH  ++D      ++
Sbjct: 74  FVPPHLGDIWISLDTARRQAEARGAPLEEEVLVLAAHGLWHLLGHDHQKEEDWEGFHRVQ 133

Query: 156 RSIL 159
             IL
Sbjct: 134 ERIL 137


>gi|313680087|ref|YP_004057826.1| hypothetical protein Ocepr_1196 [Oceanithermus profundus DSM 14977]
 gi|313152802|gb|ADR36653.1| protein of unknown function UPF0054 [Oceanithermus profundus DSM
           14977]
          Length = 141

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++++     RI  L   + G D  T+VLSFPT +   D      LGD+ ++ +  + +A
Sbjct: 37  EVTVILCSDRRIRELKRAHWGEDAATDVLSFPT-YEPGDPFLPPHLGDVWISLDTAQRQA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
              G   E+ ++ L  HG  HLLG+DH  ++       ++R ILE
Sbjct: 96  REQGHALEDEVLTLAAHGLWHLLGHDHTTEEAWRGFRNVQRRILE 140


>gi|257784596|ref|YP_003179813.1| hypothetical protein Apar_0793 [Atopobium parvulum DSM 20469]
 gi|257473103|gb|ACV51222.1| protein of unknown function UPF0054 [Atopobium parvulum DSM 20469]
          Length = 169

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           +A  NL+     +K     +S+       I+ +N E+R  + PT+V+S           +
Sbjct: 23  EADCNLVLSEEGIKRPCA-VSISIVSDEEIQQVNLEWREKNAPTDVISLEVERPDDPDLA 81

Query: 98  S---LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
                 LGDI+LA + I  +A   G    +    +++H  LHLLGYDHV D +A VME  
Sbjct: 82  PGEMCELGDIILAPQFIARQAKEYGTTEADEFRLMLVHAMLHLLGYDHVADDEAEVMEAR 141

Query: 155 ERSILEDL 162
           E +++  L
Sbjct: 142 EDALVALL 149


>gi|284030364|ref|YP_003380295.1| hypothetical protein Kfla_2422 [Kribbella flavida DSM 17836]
 gi|283809657|gb|ADB31496.1| protein of unknown function UPF0054 [Kribbella flavida DSM 17836]
          Length = 158

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++++  E+ +  D   L  L   V +                  ELS+   D   +   
Sbjct: 1   MNVEVNNESGVEIDAHGLMRLSRFVMSS----------LRLHPECELSIKLVDEDTMARY 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLM--LGDIVLAYEIIEIEANVLGKEFEN 124
           + E+  +  PT+V+S+P       + +D     +  LGDI L   +   +    G     
Sbjct: 51  HVEFLDLPGPTDVMSWPMDELRPGSDNDDAEPPLGHLGDIALCPTVAAAQGAKAGHGTWA 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLGYDH +  +   M  ++  +LE  
Sbjct: 111 ELELLTVHGILHLLGYDHAEPAEKAEMWDVQGRLLEAW 148


>gi|296140455|ref|YP_003647698.1| hypothetical protein Tpau_2761 [Tsukamurella paurometabola DSM
           20162]
 gi|296028589|gb|ADG79359.1| protein of unknown function UPF0054 [Tsukamurella paurometabola DSM
           20162]
          Length = 179

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 16/158 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++ A E+    DE  L  +     A    +             EL+++  D   +  L
Sbjct: 1   MSIEFANESGFDVDEAELVAVAAFAIAAMDVH----------PGAELNMLAVDLDTMADL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLM------LGDIVLAYEIIEIEANVLGKEFEN 124
           + ++  +  PT+V+SFP    +  G   ++      LGDIVL  +    +A   G    +
Sbjct: 51  HVKWMDLPGPTDVMSFPMDELTPGGRPDMVDAGPATLGDIVLCPQFAAEQAEAAGHSTAH 110

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            L  L +HG LHLLG+DH + ++   M GL+ SIL + 
Sbjct: 111 ELNVLTVHGVLHLLGFDHAEPEEEREMFGLQDSILAEY 148


>gi|289433031|ref|YP_003462904.1| hypothetical protein DehalGT_1088 [Dehalococcoides sp. GT]
 gi|288946751|gb|ADC74448.1| protein of unknown function UPF0054 [Dehalococcoides sp. GT]
          Length = 160

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             + L    F K +++   K      +  EL +V T    I+ LN +YR +D+PT+VLSF
Sbjct: 10  PFKKLVSAQFLKKIASETLKAQAADPSS-ELGIVITGQEEIKELNCKYRQLDEPTDVLSF 68

Query: 87  ------PTAFASSDGCSSLM-----LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
                 P    + D   +       LG+++++Y   E++A   G    + L  L+IHG L
Sbjct: 69  YMLEENPENLTAPDDFPTPPDEATHLGEVIISYPQAELQAGAAGHSVNHELAFLLIHGVL 128

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDL 162
           HLLGYDH +     VM+  +   ++ +
Sbjct: 129 HLLGYDHHETAAEAVMKSHQDIAMKHI 155


>gi|195941799|ref|ZP_03087181.1| putative metalloprotease [Borrelia burgdorferi 80a]
 gi|216264854|ref|ZP_03436846.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|221217391|ref|ZP_03588862.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|224533033|ref|ZP_03673639.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|224533910|ref|ZP_03674495.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225549226|ref|ZP_03770199.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|225549724|ref|ZP_03770689.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|215981327|gb|EEC22134.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|221192669|gb|EEE18885.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|224512027|gb|EEF82422.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|224512913|gb|EEF83279.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225369684|gb|EEG99132.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|225370084|gb|EEG99524.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|312148321|gb|ADQ30980.1| conserved hypothetical protein [Borrelia burgdorferi JD1]
          Length = 155

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +             F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFEHLSVFYD-----FVVSVLNALSISDF------ELSVILCDNAYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+V+++E ++  A     E
Sbjct: 50  QELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINYKIQGDLVISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
               L  + IHG LHL+GY H   D     M  L+ +IL++
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFQKESMLILQENILKE 150


>gi|218781165|ref|YP_002432483.1| hypothetical protein Dalk_3326 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762549|gb|ACL05015.1| protein of unknown function UPF0054 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 127

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 59/107 (55%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELS++  D  R+  L+ EY G   PTNVL+FP      +  +  ++GD+V+  ++   EA
Sbjct: 18  ELSVLIVDGGRMAELHEEYVGKQGPTNVLAFPMTEGPFNEINPEIIGDVVICTDVAAKEA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              G +     + L+IHG LHL+G+DH + ++  +M+  E  + E  
Sbjct: 78  EDAGVDLYTRALELLIHGILHLVGHDHAEPEETALMQAKEAELFEQF 124


>gi|312148985|gb|ADQ29056.1| conserved hypothetical protein [Borrelia burgdorferi N40]
          Length = 155

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLNVFYD--FVVSVLNALSISDF------ELSVILCDNAYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+V+++E ++  A     E
Sbjct: 50  QELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINYKIQGDLVISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
               L  + IHG LHL+GY H   D     M  L+ +IL++
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFQKESMLILQENILKE 150


>gi|74001576|ref|XP_848242.1| PREDICTED: similar to UPF0054 protein C21orf57 homolog isoform 1
           [Canis familiaris]
          Length = 164

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L L+  D+  ++ LN  YRG D+PT+VLSFP                    LGDIV
Sbjct: 33  RDFDLGLLCVDNEGMQRLNRAYRGDDRPTDVLSFPFHENVKAGELPRPRSRDDYNLGDIV 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  E +         ++ + L     HG  HLLG+ H  + +   M   E+ +LE+L
Sbjct: 93  LGVEYVFQRCR-GDADYYDALTVTAAHGLCHLLGFTHSTEAEWRKMYQKEKQVLEEL 148


>gi|113955023|ref|YP_731849.1| hypothetical protein sync_2661 [Synechococcus sp. CC9311]
 gi|122945509|sp|Q0I6S3|RRMF_SYNS3 RecName: Full=Probable rRNA maturation factor
 gi|113882374|gb|ABI47332.1| Hypothetical UPF0054 protein [Synechococcus sp. CC9311]
          Length = 177

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 6/144 (4%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E   W  E  L    E +  +              + + L +   D   I  LN  +R  
Sbjct: 30  EAGDW--ECELSAWIEAL--RQDHGNHCPEVVRTCDSLSLGISLLDDASIAELNLHWRQK 85

Query: 78  DKPTNVLSFPTAFASSDGC--SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
             PT+VLSF    +         L LGDIV++      +A       E  L  L+ HG L
Sbjct: 86  PTPTDVLSFAALESEMPMVAGQELELGDIVVSVPTARRQALEQKHGLERELRWLVSHGLL 145

Query: 136 HLLGYDHVDDKDACVMEGLERSIL 159
           HLL +DH D+     M   +  +L
Sbjct: 146 HLLSWDHPDEDALAAMLQKQEHLL 169


>gi|154504368|ref|ZP_02041106.1| hypothetical protein RUMGNA_01872 [Ruminococcus gnavus ATCC 29149]
 gi|153795297|gb|EDN77717.1| hypothetical protein RUMGNA_01872 [Ruminococcus gnavus ATCC 29149]
          Length = 165

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 17/155 (10%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           EI L    + V    V   +   Y       E++L+ T    I  +N E+R ID+ T+VL
Sbjct: 10  EITLPFETKEVADLVVEAAL--EYEGCPYEAEINLLLTTDDEIHRMNEEFRQIDRATDVL 67

Query: 85  SFPTAFASSDGC---------------SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           SFP     + G                  LMLGDIV++ E +  +A   G   +     L
Sbjct: 68  SFPMLEYETPGDFSFVEEEAEAFNPESGELMLGDIVISKEKVLAQAEAYGHSPKREFAFL 127

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           I H  LHL GYDH+++++  VME  +R I+E + I
Sbjct: 128 IAHSMLHLFGYDHMEEEERLVMEERQREIMEKVQI 162


>gi|15594406|ref|NP_212194.1| putative metalloprotease [Borrelia burgdorferi B31]
 gi|218249454|ref|YP_002374591.1| hypothetical protein BbuZS7_0061 [Borrelia burgdorferi ZS7]
 gi|223889176|ref|ZP_03623765.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|226320768|ref|ZP_03796324.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
 gi|226322028|ref|ZP_03797553.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|6686087|sp|O51087|RRMF_BORBU RecName: Full=Probable rRNA maturation factor
 gi|226734032|sp|B7J0Z6|RRMF_BORBZ RecName: Full=Probable rRNA maturation factor
 gi|2687941|gb|AAC66448.1| conserved hypothetical protein [Borrelia burgdorferi B31]
 gi|218164642|gb|ACK74703.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
 gi|223885425|gb|EEF56526.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|226232618|gb|EEH31372.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|226233823|gb|EEH32548.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
          Length = 155

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    +  F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLNVFYD--FVVSVLNALSISDF------ELSVILCDNAYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+V+++E ++  A     E
Sbjct: 50  QELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINYKIQGDLVISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
               L  + IHG LHL+GY H   D     M  L+ +IL++
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFQKEGMLILQENILKE 150


>gi|224282932|ref|ZP_03646254.1| putative metalloprotease [Bifidobacterium bifidum NCIMB 41171]
 gi|310287375|ref|YP_003938633.1| hypothetical protein BBIF_0854 [Bifidobacterium bifidum S17]
 gi|311064216|ref|YP_003970941.1| hypothetical protein BBPR_0823 [Bifidobacterium bifidum PRL2010]
 gi|313140091|ref|ZP_07802284.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|309251311|gb|ADO53059.1| conserved hypothetical protein [Bifidobacterium bifidum S17]
 gi|310866535|gb|ADP35904.1| Conserved hypothetical protein in uncharacterized protein family
           UPF0054 [Bifidobacterium bifidum PRL2010]
 gi|313132601|gb|EFR50218.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 181

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG---CSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  +  ++ PT+V+SFP               +LGD+V+   +  
Sbjct: 36  DLTILFVDPDPIAELHERWMSLEGPTDVMSFPMDELRPGDGKTTMEGVLGDLVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV  +    M GL+R +L
Sbjct: 96  QQAAAAGHSTMQEMMLLTIHGILHLLGYDHVTPEQERQMFGLQRQLL 142


>gi|57233865|ref|YP_182081.1| hypothetical protein DET1370 [Dehalococcoides ethenogenes 195]
 gi|123618332|sp|Q3Z6R8|RRMF_DEHE1 RecName: Full=Probable rRNA maturation factor
 gi|57224313|gb|AAW39370.1| conserved hypothetical protein TIGR00043 [Dehalococcoides
           ethenogenes 195]
          Length = 172

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             + L    F K +++   K      N  EL +V T    I+ LN +YRG+D+PT+VLSF
Sbjct: 22  PFKKLVSTPFLKKIASKTLKAQAADPNS-ELGIVITGQEEIKDLNLKYRGLDEPTDVLSF 80

Query: 87  PTAFASSD-----------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
                + +              ++ LG+++++Y   E++A        + +  L+IHG L
Sbjct: 81  YMLEENPENLTAADDFPTPPDENIHLGEVIISYPQAELQATAASHSVSHEIAFLLIHGVL 140

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDL 162
           HLLGYDH +     VM+  +   ++ +
Sbjct: 141 HLLGYDHHEVVAEAVMKSHQDIAMKHI 167


>gi|298245008|ref|ZP_06968814.1| protein of unknown function UPF0054 [Ktedonobacter racemifer DSM
           44963]
 gi|297552489|gb|EFH86354.1| protein of unknown function UPF0054 [Ktedonobacter racemifer DSM
           44963]
          Length = 216

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 30/181 (16%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P ++L I +E+A     I  + L  V   + VS  +S     +  +  ++L+ TD   I 
Sbjct: 36  PLIELYITIEDAQQSAAIE-KALENVNLDEVVSQTLSAVNIHEPIM--VTLLVTDDEGIR 92

Query: 69  TLNFEYRGIDKPTNVLSFP-----------------------TAFASSDGCSSL----ML 101
            +N +YR IDK T+VLSFP                          +  D  +       L
Sbjct: 93  DMNKQYREIDKATDVLSFPLLNEPLVQAPAEQLWPVRESEAGAQESVPDFITPPETVQNL 152

Query: 102 GDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           GDIV+++  +E +A          L++L+ HG LHL+GYD   +     M G+++ ++  
Sbjct: 153 GDIVMSWPTLERQAQEAKHSTIYELLYLLSHGMLHLVGYDDHTEAGYQAMVGIQQRVMNT 212

Query: 162 L 162
           L
Sbjct: 213 L 213


>gi|327260856|ref|XP_003215249.1| PREDICTED: rRNA maturation factor homolog isoform 1 [Anolis
           carolinensis]
 gi|327260858|ref|XP_003215250.1| PREDICTED: rRNA maturation factor homolog isoform 2 [Anolis
           carolinensis]
          Length = 165

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 10/145 (6%)

Query: 28  LRTLCEVVFAKAV---SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +R L   +  + V    N+      +     +L ++   +  I+ LN  YR  + PT+VL
Sbjct: 5   IRNLQRAIPIRRVPLRQNIERLRCILGVQRFDLGVICVSNRHIQQLNRCYRQKNIPTDVL 64

Query: 85  SFPT-------AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           SFP                    LGDI L  E I  +     +++ N L   + HG  HL
Sbjct: 65  SFPFHENLKAGELPQHFAQDEYNLGDIFLGVEYIYQQCVHYNEDYYNILTVTVAHGLCHL 124

Query: 138 LGYDHVDDKDACVMEGLERSILEDL 162
           LGY H    D   M   E  IL++L
Sbjct: 125 LGYKHSTKADWEEMYKKEAQILQEL 149


>gi|147669820|ref|YP_001214638.1| hypothetical protein DehaBAV1_1181 [Dehalococcoides sp. BAV1]
 gi|189038619|sp|A5FPW5|RRMF_DEHSB RecName: Full=Probable rRNA maturation factor
 gi|146270768|gb|ABQ17760.1| protein of unknown function UPF0054 [Dehalococcoides sp. BAV1]
          Length = 160

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             + L    F K +++   K      +  EL +V T    I+ LN +YR +D+PT+VLSF
Sbjct: 10  PFKKLVSAQFLKKIASETLKAQAADPSS-ELGIVITGQEEIKELNCKYRQLDEPTDVLSF 68

Query: 87  ------PTAFASSDGCSSLM-----LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
                 P    + D   +       LG+++++Y   E++A   G    + L  L+IHG L
Sbjct: 69  YMLEENPENLTAPDDFPTPPDEATHLGEVIISYPQAELQAGAAGHSVNHELAFLLIHGVL 128

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDL 162
           HLLGYDH +     VM+  +   ++ +
Sbjct: 129 HLLGYDHHETAAEAVMKSHQDIAMKHI 155


>gi|261885819|ref|ZP_06009858.1| putative metalloprotease [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 134

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 7/111 (6%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            E+ LVF  +  +  +N + RG+DK T+VLSFP  +          +G IV+  ++   +
Sbjct: 22  AEVELVFVSNEEMREINRDKRGMDKTTDVLSFPLTY-----VPHFPIGSIVINTDLASSK 76

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           A  LG   ++ +  L  HG LH+LG+DH +D     M   E S++E +G+ 
Sbjct: 77  ALELGHSTDDEIALLFTHGLLHILGFDHENDD--GEMRRKEISMMEHMGLP 125


>gi|111114881|ref|YP_709499.1| putative metalloprotease [Borrelia afzelii PKo]
 gi|123341437|sp|Q0SPA5|RRMF_BORAP RecName: Full=Probable rRNA maturation factor
 gi|110890155|gb|ABH01323.1| conserved hypothetical protein [Borrelia afzelii PKo]
          Length = 152

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    + + +  V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLSIFYDFILS--VLNTLSISDF------ELSVILCDNVYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML---GDIVLAYEIIEIEANVLGKEFEN 124
           + LN ++R  ++PT+VLSF     + D    +     GD+++++E ++  A     E   
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNEVNEDLVDGINYKIQGDLIISFEYLKFSAQEFNVEIYE 109

Query: 125 HLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
            L  + IHG LHL+GY H   D     M  L+ +IL  
Sbjct: 110 ELQRVTIHGILHLMGYKHETNDFQKEGMLILQENILRK 147


>gi|261337356|ref|ZP_05965240.1| putative metalloprotease [Bifidobacterium gallicum DSM 20093]
 gi|270277734|gb|EFA23588.1| putative metalloprotease [Bifidobacterium gallicum DSM 20093]
          Length = 181

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIE 112
           +L+++F D   I  L+  + G+  PT+V+SFP            S  +LGDIV+   +  
Sbjct: 36  DLAILFVDPDPIAQLHERWMGLLGPTDVMSFPMDELRPGSTNALSEGILGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDH        M GL+R +L
Sbjct: 96  QQAAAAGHSAMEEMLLLTIHGVLHLLGYDHRTKDQERQMFGLQRQLL 142


>gi|224534895|ref|ZP_03675464.1| conserved hypothetical protein [Borrelia spielmanii A14S]
 gi|224513835|gb|EEF84160.1| conserved hypothetical protein [Borrelia spielmanii A14S]
          Length = 155

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    + + +  V N +S   F      ELS++  D+  I
Sbjct: 1   MSKFDLNLLVENIKFE---HLSIFYDFILS--VLNTLSISDF------ELSVILCDNVYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+++++E ++  A     E
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNEDNEVNEGLVDGINYKIQGDLIISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
               L  + IHG LHL+GY H   D     M  L+ +IL  
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFQKEGMLILQENILRK 150


>gi|216263745|ref|ZP_03435739.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
 gi|215979789|gb|EEC20611.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
          Length = 152

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    + + +  V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLGIFYDFILS--VLNTLSISDF------ELSVILCDNVYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML---GDIVLAYEIIEIEANVLGKEFEN 124
           + LN ++R  ++PT+VLSF     + D    +     GD+++++E ++  A     E   
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNEVNEDLVDGINYKIQGDLIISFEYLKFSAQEFNVEIYE 109

Query: 125 HLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
            L  + IHG LHL+GY H   D     M  L+ +IL  
Sbjct: 110 ELQRVTIHGILHLMGYKHETNDFQKEGMLILQENILRK 147


>gi|297566635|ref|YP_003685607.1| hypothetical protein Mesil_2231 [Meiothermus silvanus DSM 9946]
 gi|296851084|gb|ADH64099.1| protein of unknown function UPF0054 [Meiothermus silvanus DSM 9946]
          Length = 149

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 8/136 (5%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
                LR+  +    K ++ L   G+        +++V TD   I  L  E+ G D PT+
Sbjct: 19  PIPARLRSRLKRSLGKLMAELGYPGHA-------VTVVLTDDPEIRALKLEHWGEDTPTD 71

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           VLSFPT F   D      LGDIV++ +  + +A   G   E   + L  H   HLLG+DH
Sbjct: 72  VLSFPT-FEPGDPFVPPHLGDIVISLDTAKHQAEEHGHTLETEALILAAHSLWHLLGHDH 130

Query: 143 VDDKDACVMEGLERSI 158
             + +      ++  I
Sbjct: 131 TTEAEWAHFHHVQALI 146


>gi|86609356|ref|YP_478118.1| hypothetical protein CYB_1900 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123501846|sp|Q2JKD4|RRMF_SYNJB RecName: Full=Probable rRNA maturation factor
 gi|86557898|gb|ABD02855.1| conserved hypothetical protein TIGR00043 [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 163

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 7/120 (5%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-- 88
           + E  +       + +     +   ELSL  T    I  LN E+R +D+PT+VL+F    
Sbjct: 17  IEEATWRHWFEIWLKE--LGVQEPCELSLCLTSDEHIRQLNREFRHLDEPTDVLAFAAQE 74

Query: 89  ---AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
               F   D     +LGDIV++      +A   G      L  L  HG LHLLG+DH D+
Sbjct: 75  MLAPFGIQDITGVRLLGDIVISVPTARAQAKAQGHRLSQELAWLASHGLLHLLGWDHPDE 134


>gi|304373107|ref|YP_003856316.1| Putative metalloprotease [Mycoplasma hyorhinis HUB-1]
 gi|304309298|gb|ADM21778.1| Putative metalloprotease [Mycoplasma hyorhinis HUB-1]
 gi|330723268|gb|AEC45638.1| Putative metalloprotease [Mycoplasma hyorhinis MCLD]
          Length = 150

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-TAFASSDGCSS 98
           + N+I K     +  + L     D  ++    F+Y+G D+ T++LSFP     S+     
Sbjct: 24  ILNIIEKEE-KFQKPLSLDFTLIDDEQMRKYYFQYKGKDRTTDILSFPFVNSFSTSFMKE 82

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
             LG+I+++Y+ I+ +A   G        +L  HG  HLLGYDH+  ++   M      I
Sbjct: 83  KFLGEILISYQKIQQQAKEYGHSVTREFCYLFTHGVYHLLGYDHISLEEEKQMNKKVDKI 142

Query: 159 LEDLGIN 165
           ++ L I 
Sbjct: 143 MKLLQIE 149


>gi|225551912|ref|ZP_03772852.1| conserved hypothetical protein [Borrelia sp. SV1]
 gi|225370910|gb|EEH00340.1| conserved hypothetical protein [Borrelia sp. SV1]
          Length = 155

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +   DL + VEN  +             F  +V N +S   F      ELS++  D+  I
Sbjct: 1   MSESDLNLLVENIKFEHLSVFYD-----FIVSVLNTLSISDF------ELSVILCDNAYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+V+++E ++  A     E
Sbjct: 50  QELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINCKIQGDLVISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
               L  + IHG LHL+GY H   D     M  L+ +IL++
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFQKEGMLILQENILKE 150


>gi|326333966|ref|ZP_08200196.1| putative metalloprotease [Nocardioidaceae bacterium Broad-1]
 gi|325948245|gb|EGD40355.1| putative metalloprotease [Nocardioidaceae bacterium Broad-1]
          Length = 154

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 14/157 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +  +I  E+    D  H+  L   +  +                 +L + F D   I  L
Sbjct: 1   MSTEIINESEQEIDVEHVAKLARFLLEQ----------LRVHPQADLRIKFGDEATITEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASS----DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           N  Y   + PT+VLSFP          +      LGDI++A  I   +    G      +
Sbjct: 51  NERYFDTEGPTDVLSFPGDELLPGRLDEEPEEGDLGDIIIAPTIAAKQGEAAGHGTVAEI 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
             L  HG LHLLGYDHVD  +   M GL+  +L+  G
Sbjct: 111 ELLTTHGILHLLGYDHVDPDEHAEMFGLQAKLLKAWG 147


>gi|87300846|ref|ZP_01083688.1| hypothetical protein WH5701_05340 [Synechococcus sp. WH 5701]
 gi|87284717|gb|EAQ76669.1| hypothetical protein WH5701_05340 [Synechococcus sp. WH 5701]
          Length = 202

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 60/179 (33%), Gaps = 30/179 (16%)

Query: 11  LDLQIAVENALWG----------DEIHLRTLCEVVFAKAVSNLISK-GYFVKENIVELSL 59
           LDL  + +  L            D          + A  +  +  +    ++     L L
Sbjct: 8   LDLAFSCDEQLSPVLLKAAGPLADPATAEGPWRDLLAAWLEQMQPELPQALRAPAYSLGL 67

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-------------------SLM 100
                  +  LN  +R    PT+VL+F       +G                      L 
Sbjct: 68  SLVGDGEMAELNESWRSQQGPTDVLAFAAQDEGLEGAPAMPKPPELASDQELPEQGEPLE 127

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           LGDIV++ E    +A   G      L  L  HG LHLLG+DH DD     M   +  +L
Sbjct: 128 LGDIVISLETAARQAEAAGVSLARELRWLASHGLLHLLGWDHPDDARLEAMLRRQDQLL 186


>gi|78777269|ref|YP_393584.1| putative metalloprotease [Sulfurimonas denitrificans DSM 1251]
 gi|123550289|sp|Q30RN2|RRMF_SULDN RecName: Full=Probable rRNA maturation factor
 gi|78497809|gb|ABB44349.1| Protein of unknown function UPF0054 [Sulfurimonas denitrificans DSM
           1251]
          Length = 139

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ L+ TD   +  +N  +R IDK T+VLSFP             LG IV+    +E ++
Sbjct: 28  EIELIVTDKDEMREINSAHRNIDKATDVLSFPYIE-----MPLSPLGSIVICSLHVEEKS 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G    +    L IHG LHLLGYDH  + D+  M   E  I+++  + 
Sbjct: 83  KEFGHTLNDEFALLFIHGLLHLLGYDH--EVDSGEMREEEARIIKEFNLP 130


>gi|73749054|ref|YP_308293.1| hypothetical protein cbdb_A1322 [Dehalococcoides sp. CBDB1]
 gi|123620002|sp|Q3ZYT5|RRMF_DEHSC RecName: Full=Probable rRNA maturation factor
 gi|73660770|emb|CAI83377.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
          Length = 166

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             + L    F K +++   K      +  EL +V T    I+ LN +YR +D+PT+VLSF
Sbjct: 16  PFKKLVSAQFLKKIASETLKAQAADPSS-ELGIVITGQEEIKELNCKYRQLDEPTDVLSF 74

Query: 87  ------PTAFASSDGCSSLM-----LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
                 P    + D   +       LG+++++Y   E++A   G    + L  L+IHG L
Sbjct: 75  YMLEENPENLTAPDDFPTPPDEATHLGEVIISYPQAELQAGAAGHSVNHELAFLLIHGVL 134

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDL 162
           HLLGYDH +     VM+  +   ++ +
Sbjct: 135 HLLGYDHHETAAEAVMKSHQDIAMKHI 161


>gi|221194510|ref|ZP_03567567.1| putative metalloprotease [Atopobium rimae ATCC 49626]
 gi|221185414|gb|EEE17804.1| putative metalloprotease [Atopobium rimae ATCC 49626]
          Length = 169

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC---SSLMLGDIVLAYEIIEI 113
           +S+       I T+N  +R  D  T+V+S      + +         LGDI+LA   I+ 
Sbjct: 41  VSISVVSDEEIRTVNRTWRNADAVTDVISLEVERPNDEDLAPGEPCELGDILLAPAYIKR 100

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDP 167
           +A        +    +++H  LHLLGYDH++D++A  ME  E +++  +  ++P
Sbjct: 101 QAATYHTTPADEFRLMLVHAMLHLLGYDHLNDEEAECMEAREDALVAMIKTDNP 154


>gi|154148178|ref|YP_001406320.1| putative metalloprotease [Campylobacter hominis ATCC BAA-381]
 gi|153804187|gb|ABS51194.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
          Length = 138

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 8/135 (5%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           +CE  F + ++++     F+    VEL  VF +S  ++ LN   RGIDK T+VLSFP  F
Sbjct: 3   ICETEFPQILNDI---NKFLGSYNVEL--VFVNSDEMKELNLTERGIDKTTDVLSFPL-F 56

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           +  D      +G +V+  ++ + +AN LG    + +  L +HGFLH+LG+DH  D     
Sbjct: 57  SKIDNYGDFPIGSVVINLDLAKRKANELGHNVNDEIALLFMHGFLHILGFDHETDN--GE 114

Query: 151 MEGLERSILEDLGIN 165
           M   ER I+E+  + 
Sbjct: 115 MREKEREIIENFKLP 129


>gi|50365081|ref|YP_053506.1| putative metal-dependent hydrolase [Mesoplasma florum L1]
 gi|59799030|sp|Q6F1K1|RRMF_MESFL RecName: Full=Probable rRNA maturation factor
 gi|50363637|gb|AAT75622.1| putative metal-dependent hydrolase [Mesoplasma florum L1]
          Length = 169

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           +  + +E  L+       AK + N   K Y   +N + LS+ F DS   + +N EYR   
Sbjct: 3   SIDFINETDLKVKEWEDLAKQIINSGFK-YLKLKNKINLSITFLDSEPAQKINQEYRNHS 61

Query: 79  KPTNVLSFPTAFASSD--GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
              +V SFP   +  +        +GDI +  E  E ++       +  +  L  HGFLH
Sbjct: 62  YIPDVTSFPIEMSPQEIKALGYQEIGDIFICIEEAERKSIKYDHSLKEEMGFLFTHGFLH 121

Query: 137 LLGYDHVD-DKDACVMEGLERSILE 160
           L+GYDH   +KD   M  ++  IL+
Sbjct: 122 LMGYDHETNEKDEEEMFFIQDEILK 146


>gi|301064609|ref|ZP_07205005.1| translation metalloprotein YbeY [delta proteobacterium NaphS2]
 gi|300441357|gb|EFK05726.1| translation metalloprotein YbeY [delta proteobacterium NaphS2]
          Length = 128

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-----MLGDIVLAYEI 110
           ELS++FTD   +  LN +YR  +  T+VLSF    A      +      MLGD+V++ + 
Sbjct: 16  ELSILFTDDENMAVLNRQYRQKEGATDVLSFSMQEALDGEDGTPLFETVMLGDVVISVDT 75

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILE 160
              +A  LG+ FE  +  L+IHG LHL GYDH    +D+  M   E  +L 
Sbjct: 76  ALRDAKELGESFEKTVDRLLIHGILHLTGYDHERSQEDSERMMAAEERLLA 126


>gi|261839888|gb|ACX99653.1| hypothetical protein HPKB_1090 [Helicobacter pylori 52]
          Length = 140

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++RG D  T+VLSFP      +      LG +V+   + +  A  LG   E+ +  L IH
Sbjct: 46  DFRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQTNALKLGHSLEDEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|124515714|gb|EAY57223.1| conserved protein of unknown function [Leptospirillum rubarum]
          Length = 169

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 2/114 (1%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           + E    +++ F ++ RI  +N EYRG ++ T+VLSF               G+I+++ E
Sbjct: 30  LGEAQKNVTITFVNNRRIRIVNREYRGKNRSTDVLSFSYPSPPFPDIPFPD-GEILISTE 88

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDL 162
             E +A       E  +V+LIIHG  HL G+DH    +DA  M+  ER I + L
Sbjct: 89  KAERQAREQNIPLETEIVNLIIHGLCHLAGHDHETGPEDALRMKHAERKIAKTL 142


>gi|296532214|ref|ZP_06894964.1| possible metal-dependent hydrolase [Roseomonas cervicalis ATCC
           49957]
 gi|296267458|gb|EFH13333.1| possible metal-dependent hydrolase [Roseomonas cervicalis ATCC
           49957]
          Length = 159

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 7/113 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++++ TD   ++ LN E+R   KPTNVLSFP       G     LGDI LA  ++  EA 
Sbjct: 51  MTVLLTDDRSVKRLNGEHRNKVKPTNVLSFP-------GEGFGHLGDIALALGVVRREAR 103

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
              +    HL HL+ HG LHL G+DH+   +A  ME  E  I+  L + +P+ 
Sbjct: 104 AAKRRVAAHLAHLVAHGTLHLGGHDHIQAGEARRMERAEARIMRRLALPNPWR 156


>gi|88606960|ref|YP_505804.1| hypothetical protein APH_1290 [Anaplasma phagocytophilum HZ]
 gi|123494243|sp|Q2GIJ7|RRMF_ANAPZ RecName: Full=Probable rRNA maturation factor
 gi|88598023|gb|ABD43493.1| conserved hypothetical protein TIGR00043 [Anaplasma phagocytophilum
           HZ]
          Length = 154

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 4/112 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S+V      +  LN +YR I+KPTNVLSF     S + C    LG+I L+ + +  E+ 
Sbjct: 43  VSVVLAHDALLLELNHKYRNINKPTNVLSFNYEALSHNCC----LGEIFLSIDRLTYESK 98

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            LG E   H  H++IHG LH+LGYDH   +DA  M+ LE  +L    I +PY
Sbjct: 99  TLGVEVHAHFTHMLIHGVLHILGYDHEVPEDAQEMQALEIDLLSKRSIENPY 150


>gi|255525314|ref|ZP_05392254.1| protein of unknown function UPF0054 [Clostridium carboxidivorans
           P7]
 gi|255510986|gb|EET87286.1| protein of unknown function UPF0054 [Clostridium carboxidivorans
           P7]
          Length = 120

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 17/118 (14%)

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFAS-----------------SDGCSSLMLGDIVLA 107
            +I+ +N E R IDK T+VLSFP                           SL+LGDIVL+
Sbjct: 2   KKIKEINKENRNIDKVTDVLSFPMLDYEKGKVFKDTYKDFNFSHVDLDEGSLVLGDIVLS 61

Query: 108 YEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            E  + ++      F   +V+L IH  LHLLGYDH+++ +  +M   E  ILE   + 
Sbjct: 62  LEKAKEQSLEFNHSFIREVVYLTIHSVLHLLGYDHMEEDEKSIMRKREEQILEKFHLT 119


>gi|332297629|ref|YP_004439551.1| metalloprotease ybeY [Treponema brennaborense DSM 12168]
 gi|332180732|gb|AEE16420.1| metalloprotease ybeY [Treponema brennaborense DSM 12168]
          Length = 162

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA--SSDGCSSLMLGDIVLAYEIIEI 113
           E+S++F     I  LN +YR I  PT+VLSF         DG      GDIV++ + +E 
Sbjct: 42  EVSVLFCADPFIAELNLQYRSIKGPTDVLSFELGDEYIDEDGVPWTSAGDIVVSIDTLER 101

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            A   G   +  L  L+IHG LHL GYDH D+     M  L+ SIL D 
Sbjct: 102 NALEFGVPVDQELKRLLIHGVLHLSGYDHSDNSPEQEMLVLQESILPDF 150


>gi|123965446|ref|YP_001010527.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9515]
 gi|123199812|gb|ABM71420.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9515]
          Length = 135

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 2/134 (1%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-- 88
           +C +    +  N     +   + I  LSL   +++ I ++N ++     PT+VLSFP   
Sbjct: 1   MCWINIILSEKNTSFPNFIFDKKIFSLSLQIINNNEISSINQKWMDKSGPTDVLSFPMIS 60

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
              ++   + + LGD+ ++ E+   ++       +  ++ L  HGFLHLLG++H DD + 
Sbjct: 61  DEDTTKNLNFIELGDLFISLEMAFQQSLEFDHSIKKEMLWLASHGFLHLLGWEHNDDNEL 120

Query: 149 CVMEGLERSILEDL 162
             M   +  ++  L
Sbjct: 121 DNMLNFQEYLISKL 134


>gi|301604850|ref|XP_002932054.1| PREDICTED: putative metalloprotease C21orf57-like [Xenopus
           (Silurana) tropicalis]
          Length = 165

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-------LG 102
           +K    +L ++   + RI  +N  YRG D  T+VLSFP     +     +        LG
Sbjct: 30  LKVRNFDLGIICVSNARIRHINRVYRGQDSVTDVLSFPFHEDLNPSLLPIPASSDEYNLG 89

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI L  E I  +     +++ + L    +HG  HLLG+ H + +    M   E  IL+++
Sbjct: 90  DIYLGVEFIYQQCQKTQEDYSSILTICAVHGLCHLLGHQHNNPEQWKQMLEKETEILKEI 149

Query: 163 G 163
            
Sbjct: 150 N 150


>gi|158334602|ref|YP_001515774.1| hypothetical protein AM1_1432 [Acaryochloris marina MBIC11017]
 gi|189038694|sp|B0C7R9|RRMF_ACAM1 RecName: Full=Probable rRNA maturation factor
 gi|158304843|gb|ABW26460.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 176

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 7/149 (4%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           VEN L           +  F     +L            ELSL+ TD   I+ LN  YR 
Sbjct: 21  VENVLKQAHQITAVTWQSWFQHWFEHLQPS--ISPIQTYELSLLLTDDAAIQNLNATYRH 78

Query: 77  IDKPTNVLSFPTAFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
           +D+PT+VL+F T   +           + LGDI+++ E    +A          L  L  
Sbjct: 79  LDRPTDVLAFATLDLTEQPTDLWSEMPVELGDIIISVETAAQQAQEQQHPLPQELAWLAT 138

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILE 160
           HG LHLLG+DH   +    M   ++ ++ 
Sbjct: 139 HGLLHLLGWDHPTPERLQDMLAQQQLLIN 167


>gi|317177908|dbj|BAJ55697.1| putative metalloprotease [Helicobacter pylori F16]
          Length = 140

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            + +  + ++N+++           + LV      +  +N ++RG D  T+VLSFP    
Sbjct: 12  SDFLLLEKIANVLAPTQI-------IELVLVSDETMREINRDFRGCDYATDVLSFPL--- 61

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             +      LG +V+   + +  A  LG   EN +  L IHG LHLLGYDH  +KD    
Sbjct: 62  --EAIPHTPLGSVVINMPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQ 117

Query: 152 EGLERSILEDLGIN 165
              E  +++   + 
Sbjct: 118 RQKESELIKAFNLP 131


>gi|206895766|ref|YP_002246845.1| putative metalloprotease [Coprothermobacter proteolyticus DSM 5265]
 gi|206738383|gb|ACI17461.1| putative metalloprotease [Coprothermobacter proteolyticus DSM 5265]
          Length = 148

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 8/110 (7%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++S+ F +   I  LN +YR  ++PT+VLSF              LG+I++   +   +A
Sbjct: 35  DVSVYFCNERTIIDLNTQYRFNEEPTDVLSF--------TGEGDFLGEIIICVPVALRQA 86

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G +++     LI+H FLHLLGYD   ++    M  ++  +L++LG  
Sbjct: 87  EESGVDWQVEFAMLIVHSFLHLLGYDDETEEGFAEMVEVQNKLLKELGYE 136


>gi|160880741|ref|YP_001559709.1| hypothetical protein Cphy_2609 [Clostridium phytofermentans ISDg]
 gi|189039831|sp|A9KMV9|RRMF_CLOPH RecName: Full=Probable rRNA maturation factor
 gi|160429407|gb|ABX42970.1| protein of unknown function UPF0054 [Clostridium phytofermentans
           ISDg]
          Length = 165

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 18/157 (11%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E++     EV+  + +   +   Y       E+++V T++  I+ +N EYR ID PT+VL
Sbjct: 10  EVNFDFNEEVLIKEVIEAALD--YEECPYETEINVVLTNNEEIKEINKEYREIDAPTDVL 67

Query: 85  SFPTAFASSD----------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           SFP    +                      LMLGDI+++ + +  +A   G   +  L  
Sbjct: 68  SFPMVEFNEPSDFEHVEEEQEDCFHPDSGELMLGDIIVSVDKVFSQAKEFGHSEKRELGF 127

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LI H  LHL GYDH+++++  VME  +R+IL+ + ++
Sbjct: 128 LIAHSMLHLCGYDHMEEEEREVMEERQRAILDRIHLS 164


>gi|262277763|ref|ZP_06055556.1| conserved hypothetical protein [alpha proteobacterium HIMB114]
 gi|262224866|gb|EEY75325.1| conserved hypothetical protein [alpha proteobacterium HIMB114]
          Length = 150

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 91/154 (59%), Gaps = 13/154 (8%)

Query: 12  DLQIAVENALW-GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
            + I+ ++ +W  D  ++    + +  K++   +S+  F+ +N +E+S++ T++ ++ +L
Sbjct: 3   KIHISCDSKIWLKDSTNVEKKIKNILKKSI---MSEKKFLSKN-IEISVLLTNTKKMTSL 58

Query: 71  NFEYRGIDKPTNVLSFPTA----FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           N++YR   K T++LSFP+     F       ++ LGD+ L++  I+ +       FE +L
Sbjct: 59  NYKYRNKKKDTDILSFPSEKPNFFKKKLKQKNIYLGDLALSFNYIKKQGIE----FEEYL 114

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
             +++HGFLHL+GYDH ++K+   ME ++  IL+
Sbjct: 115 KKMLVHGFLHLIGYDHDNEKNFLKMEKIQNKILK 148


>gi|206602218|gb|EDZ38700.1| Conserved protein of unknown function [Leptospirillum sp. Group II
           '5-way CG']
          Length = 169

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 3/139 (2%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E H +      FA ++    ++    +     +++ F ++ RI  +N EYRG ++ T+VL
Sbjct: 6   ENHQKKFAVDAFALSLLANEAQKTLGQSKK-NVTITFVNNRRIRIVNREYRGKNRSTDVL 64

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF               G+I+++ E  E +A       E  +++LIIHG  HL G+DH  
Sbjct: 65  SFSYPSPPFPDIPFPD-GEILISTEKAERQAREQNISLETEIINLIIHGLCHLAGHDHET 123

Query: 145 -DKDACVMEGLERSILEDL 162
             +D+  M+ +ER I   L
Sbjct: 124 GPEDSLRMKSVERKIANAL 142


>gi|33860742|ref|NP_892303.1| hypothetical protein PMM0182 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|46577388|sp|Q7V3A1|RRMF_PROMP RecName: Full=Probable rRNA maturation factor
 gi|33633684|emb|CAE18641.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 180

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 6/150 (4%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I  E+  W + +    LC +       +     + + +    LSL   + + I ++N ++
Sbjct: 34  IIFESGFWEEVL----LCWIKIILDEKDTSFPNFILYKKSFSLSLQIINDNEISSINQKW 89

Query: 75  RGIDKPTNVLSFP--TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
                 T+VLSFP  +   ++   + + LGD+ ++ E    ++       +  ++ L  H
Sbjct: 90  MNKSGSTDVLSFPIISDEDTTKDLNFIELGDLFISLETAFKQSLEFNHSIKKEMLWLASH 149

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           G LHLLG++H DD +   M   +  ++  L
Sbjct: 150 GLLHLLGWEHNDDYELDNMLNFQEYLISKL 179


>gi|242054369|ref|XP_002456330.1| hypothetical protein SORBIDRAFT_03g034080 [Sorghum bicolor]
 gi|241928305|gb|EES01450.1| hypothetical protein SORBIDRAFT_03g034080 [Sorghum bicolor]
          Length = 632

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N     +I L  L +  ++   +++   G   K + VE+S++  + + I+ LN E+RG +
Sbjct: 177 NVPMAMKIALDGLLDSSYSTRDTSISDVG---KYDKVEVSVLLCNGNFIQDLNKEWRGEN 233

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           + T++LS        D    LMLGDIV++ E    +A   G    + +  L++ G LHLL
Sbjct: 234 RTTDMLSMSQYIPDLD-VPILMLGDIVISVEAAARQAEEKGVTLLDEVRVLVVRGILHLL 292

Query: 139 GYDHVD 144
           G+ H  
Sbjct: 293 GFQHES 298


>gi|217034240|ref|ZP_03439658.1| hypothetical protein HP9810_2g19 [Helicobacter pylori 98-10]
 gi|216943300|gb|EEC22762.1| hypothetical protein HP9810_2g19 [Helicobacter pylori 98-10]
          Length = 142

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  + +L  D + L  +  V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTSLESDFLLLEKIANVLAPTQI----------------IELVLVSDKTMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++RG D  T+VLSFP      +  S   LG +V+   + +  A  LG   E+ +  L IH
Sbjct: 46  DFRGCDYATDVLSFPL-----EAISHTPLGSVVINMPLAQTNALKLGHSLEDEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|270308535|ref|YP_003330593.1| hypothetical protein DhcVS_1151 [Dehalococcoides sp. VS]
 gi|270154427|gb|ACZ62265.1| hypothetical protein DhcVS_1151 [Dehalococcoides sp. VS]
          Length = 160

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             + L    F K +++   K      N  EL +V T    I+ LNF+YR +D+PT+VLSF
Sbjct: 10  PFKKLVSSQFLKKIASETLKAQAADPNS-ELGIVITGQEEIKDLNFKYRELDEPTDVLSF 68

Query: 87  PTAFASSD-----------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
                + +              ++ LG+++++Y   EI+A+  G      +  L+IHG L
Sbjct: 69  YMLEENPENLTAPDDFPTPPDENIHLGEVIISYPQAEIQASAAGHSVNYEIAFLLIHGVL 128

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDL 162
           HLLGYDH +     VM+  +   ++ +
Sbjct: 129 HLLGYDHHEPVSEAVMKSHQDIAMKHI 155


>gi|224531809|ref|ZP_03672441.1| conserved hypothetical protein [Borrelia valaisiana VS116]
 gi|224511274|gb|EEF81680.1| conserved hypothetical protein [Borrelia valaisiana VS116]
          Length = 155

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 18/161 (11%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +                    ++S    +  +  ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFEHLSVFYDF-----------ILSVLNALSISDFELSVILCDNIYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGKE 121
           + LN ++R  ++PT+VLSF     +       DG +  + GD+++++E ++  A     E
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNEHNELTGDLVDGINYKIQGDLIISFEYLKFSAQEFNVE 109

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACV-MEGLERSILED 161
               L  + IHG LHL+GY H  +      M  L+ +IL  
Sbjct: 110 IYEELQRVTIHGILHLMGYKHETNDFKKEGMLILQENILRK 150


>gi|184200942|ref|YP_001855149.1| hypothetical protein KRH_12960 [Kocuria rhizophila DC2201]
 gi|183581172|dbj|BAG29643.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 168

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 9/158 (5%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKEN-----IVELSLVFTDSHRIETLNFEYRG 76
           WG    L  L +   A     L +      E        E+S+   D  R+  L+ ++  
Sbjct: 9   WGGPEELVQLPDAYRAVDTEQLSALVALAFERWHLHPDTEVSIAVVDEERMTQLHEQWLD 68

Query: 77  IDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           +   T+V+SFP       + +  S  +LGD+VL   +   +A   G   ++ L  L  H 
Sbjct: 69  LPGATDVMSFPMDELREGTPERPSLGVLGDVVLCPPVAARQAAAAGHSTQDELCLLTAHS 128

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
            LHLLG+DH ++ +   M   +R +LE+ LG + P E 
Sbjct: 129 LLHLLGHDHAEEHERARMFAAQRGLLEEFLGRDAPVET 166


>gi|317180891|dbj|BAJ58677.1| putative metalloprotease [Helicobacter pylori F32]
          Length = 140

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++RG D  T+VLSFP      +      LG +V+   + +  A  LG   E+ +  L IH
Sbjct: 46  DFRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQENALKLGHRLEDEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|226227119|ref|YP_002761225.1| hypothetical protein GAU_1713 [Gemmatimonas aurantiaca T-27]
 gi|226090310|dbj|BAH38755.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 167

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 15/159 (9%)

Query: 7   NLPRLD-LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSH 65
           ++P+ D   +AVE       +    L E+      +  +++          LS+ F  S 
Sbjct: 13  SVPKTDPRAVAVECDGVRIPVAAARLAELSRQVLRAGKVARAM--------LSITFVTSR 64

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
            + TLN ++ G   PT+V++F       +     ++GDI +  ++   +A   G      
Sbjct: 65  AMATLNRQHLGHTGPTDVITFAL----GNAPDGTVIGDIYICPDVARRQAREHGVGIREE 120

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACV--MEGLERSILEDL 162
           L  L++HG LH  G++H +D       M   +  ++E  
Sbjct: 121 LARLVVHGTLHASGWEHPEDDSRTTSPMWRRQEQLIERF 159


>gi|226492765|ref|NP_001146569.1| hypothetical protein LOC100280165 [Zea mays]
 gi|219887855|gb|ACL54302.1| unknown [Zea mays]
          Length = 313

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N     +I L  L +  ++   +++   G   K + VE+S++  + + I+ LN E+R +D
Sbjct: 144 NVPMAMKIALDGLLDSSYSTRDTSISDVG---KYDKVEVSVLLCNDNFIQDLNKEWRDVD 200

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
             T++LS        D    LMLGDIV++ E  E +A   G    + +  L++ G LHLL
Sbjct: 201 CATDILSMSQYIPDLD-VPILMLGDIVISVEAAERQAGEKGVTLLDEVRVLVVRGILHLL 259

Query: 139 GYDHVD 144
           G+ H  
Sbjct: 260 GFQHES 265


>gi|288928685|ref|ZP_06422531.1| metalloprotease [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329669|gb|EFC68254.1| metalloprotease [Prevotella sp. oral taxon 317 str. F0108]
          Length = 140

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 9/138 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            D + +  +        +  +        + + E+  +F +  +I  +N EY G D  T+
Sbjct: 6   ADGVKMPKIKRKDTTAWIKAV---AQSYGKKVGEVGYMFVNDEKILEINNEYLGHDYYTD 62

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           V++F            ++ GDIV++ + +   A +  K FE+ L  +IIHG LHL G + 
Sbjct: 63  VITFDYDEDD------VVNGDIVISLDTVRTNAELFDKAFEDELYRVIIHGILHLCGLND 116

Query: 143 VDDKDACVMEGLERSILE 160
               +  +ME  E   LE
Sbjct: 117 KGPGEREIMEKAENKALE 134


>gi|124024428|ref|YP_001018735.1| metal-dependent hydrolase [Prochlorococcus marinus str. MIT 9303]
 gi|123964714|gb|ABM79470.1| Predicted metal-dependent hydrolase [Prochlorococcus marinus str.
           MIT 9303]
          Length = 187

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            L    E V  +    L          ++ L L  TD   I  LN  +R   + T+VLSF
Sbjct: 46  DLTAWIESV--RRDPTLTCPEIVRLSPMLSLGLQLTDDATITELNHAWRQRSETTDVLSF 103

Query: 87  PTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           P    S      + + LGDIV++ +  + +A     E    L  L+ HG LHLLG+DH  
Sbjct: 104 PALDNSLVLPTDTCVELGDIVVSVQTAQRQAKQHSHELGLELRWLVSHGLLHLLGWDHPT 163

Query: 145 DKDACVMEGLERSIL 159
           D+    M   +  +L
Sbjct: 164 DQSLKTMLSYQEQLL 178


>gi|317178539|dbj|BAJ56327.1| putative metalloprotease [Helicobacter pylori F30]
          Length = 142

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            + +  + ++N+++           + LV      +  +N ++RG D  T+VLSFP    
Sbjct: 12  SDFLLLEKIANVLAPTQI-------IELVLVSDKTMREINRDFRGCDYATDVLSFPL--- 61

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             +      LG +V+   + +  A  LG   E+ +  L IHG LHLLGYDH  +KD    
Sbjct: 62  --EAIPHTPLGSVVINMPLAQTNALKLGHRLEDEIALLFIHGVLHLLGYDH--EKDKGEQ 117

Query: 152 EGLERSILEDLGIN 165
              E  +++   + 
Sbjct: 118 RQKESELIKAFNLP 131


>gi|283955565|ref|ZP_06373060.1| hypothetical protein C1336_000020094 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283793026|gb|EFC31800.1| hypothetical protein C1336_000020094 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 134

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L S   F+    VEL  VF DS  ++ +N E R  DK T+VLSFP          SL LG
Sbjct: 11  LESIASFLSPKDVEL--VFVDSKEMQEINLEQRKQDKTTDVLSFPLENID----ESLPLG 64

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +V+  ++ + +A  LG  +E  +  L IH  LHLLG+DH +D     M   E+ ++E  
Sbjct: 65  SVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDHENDN--GEMREKEKELIEYF 122

Query: 163 GIN 165
            + 
Sbjct: 123 NLP 125


>gi|225629632|ref|ZP_03787634.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591515|gb|EEH12553.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 97

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 4/97 (4%)

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN ++R +DKPTNVLSFP    S++      LGDI ++ + I+ E++        H+ H
Sbjct: 1   QLNLKFREMDKPTNVLSFPYEQWSNESD----LGDIAISIDSIKRESHEYYIPILAHIAH 56

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +++HG  HLLGYDH    +  +M+ LER IL  LG N
Sbjct: 57  MLVHGLRHLLGYDHPKKDEEIIMKNLEREILASLGYN 93


>gi|299768716|ref|YP_003730742.1| metal-dependent hydrolase [Acinetobacter sp. DR1]
 gi|298698804|gb|ADI89369.1| metal-dependent hydrolase [Acinetobacter sp. DR1]
          Length = 160

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 8/162 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +   +   +   E+ +   D    + L
Sbjct: 1   MKISLSLQQDFQSPELELK---RAQLKKIIETTLR--HVGYKEDCEIGVACVDLAESQQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +L LGD+V+   ++  EA    K  +NH  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAH 115

Query: 129 LIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           L++HG LHLLGYDH   D+DA  MEG+E  IL  L I +PY+
Sbjct: 116 LLVHGVLHLLGYDHETSDEDAEEMEGIEVEILAKLNIENPYQ 157


>gi|229817682|ref|ZP_04447964.1| hypothetical protein BIFANG_02953 [Bifidobacterium angulatum DSM
           20098]
 gi|229785471|gb|EEP21585.1| hypothetical protein BIFANG_02953 [Bifidobacterium angulatum DSM
           20098]
          Length = 181

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM---LGDIVLAYEIIE 112
           +L+++F D   I  ++  +  ++ PT+V+SFP         S++M   LGDIV+   +  
Sbjct: 36  DLTILFVDPDPIAQMHMHWMNLEGPTDVMSFPMDELRPGNGSTVMEGVLGDIVICPWVAA 95

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +A   G      ++ L IHG LHLLGYDHV+ +    M GL+R +L
Sbjct: 96  QQAAAAGHGVLQEMLLLTIHGILHLLGYDHVNAEQERQMFGLQRQLL 142


>gi|300727523|ref|ZP_07060914.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299775226|gb|EFI71827.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 145

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 5/139 (3%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  + +      +  + +      + + ++  +F D  RI   N +Y G D  T+V
Sbjct: 7   DGVKMPKIKKRETNAWIKAVAADH---GKKVGDIGYMFVDDERILECNRQYLGHDYYTDV 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F       +   +++ GDIV++ + I   A   GK +E+ L  +IIHG LHL G +  
Sbjct: 64  ITFDYDDDYEE--ENIIGGDIVISLDTIRTNAEKFGKTYEDELYRVIIHGILHLCGINDK 121

Query: 144 DDKDACVMEGLERSILEDL 162
              +  +ME  E   L+ L
Sbjct: 122 GPGEREIMEAHEDKALKML 140


>gi|147899075|ref|NP_001087112.1| ybeY metallopeptidase (putative) [Xenopus laevis]
 gi|50604012|gb|AAH78000.1| MGC82413 protein [Xenopus laevis]
          Length = 165

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-------LG 102
           +K    +L ++  ++ RI+ +N  YRG D  T+VLSFP     +     +        LG
Sbjct: 30  LKVKNFDLGIICVNNARIQHINRVYRGQDSVTDVLSFPFHEDLNPSLLPIPATPDEYNLG 89

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DI L    I  +     +++ + L    +HG  HLLG+ H + +    M   E  IL ++
Sbjct: 90  DIYLGVAFIYEQCQKTQEDYRSILTITAVHGLCHLLGHKHNNPEKWKQMFEKETEILNEI 149

Query: 163 G 163
            
Sbjct: 150 N 150


>gi|308273339|emb|CBX29942.1| Putative metalloprotease GSU2284 [uncultured Desulfobacterium sp.]
          Length = 173

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 3   VKKVNLPRLDLQIAVENALWG----DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELS 58
           +  +N+P+   Q A+E    G    +  +   + ++   KA   +++    +     ELS
Sbjct: 5   ITALNIPKQQFQ-ALEKGKMGVLINNSQNKLRIRKIQVRKAAQAILNA---LDCPKGELS 60

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++  D   I  LN +Y     P NV+SFP    +       +LGD+V++ E  + E N L
Sbjct: 61  ILIEDDDGITGLNEKYLQRKGPANVISFPLRDVNFPEIEHDLLGDVVISAETTQREGNSL 120

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILE 160
           G  F+     L+IHG LHL GYDH   +++A  ME     +L+
Sbjct: 121 GTGFDKRFAELLIHGILHLFGYDHEKSEQEADEMEIKASKLLK 163


>gi|87310535|ref|ZP_01092664.1| hypothetical protein DSM3645_07710 [Blastopirellula marina DSM
           3645]
 gi|87286756|gb|EAQ78661.1| hypothetical protein DSM3645_07710 [Blastopirellula marina DSM
           3645]
          Length = 165

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 6/151 (3%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKE-NIVELSLVFTDSHRIETLNFEYRG 76
           +      EI  RT       +AV   I+  +  +     E+S+   D   I  +N  +  
Sbjct: 3   DEPDEAVEITRRTQYAAPTDEAVRQAIAAVFAGESIEAYEVSVALVDDAEIHEVNRRFLQ 62

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
            D PT+V++F  +         L+ G+IV++ +    EA       ++  +  +IHG LH
Sbjct: 63  HDYPTDVVTFNLSADDD-----LLEGEIVISCQYAAAEAEKYQWPAKHETLLYVIHGALH 117

Query: 137 LLGYDHVDDKDACVMEGLERSILEDLGINDP 167
           L+GYD  +D+D   M  LER  LE +G+  P
Sbjct: 118 LVGYDDHEDEDRLTMRRLERVYLEQVGLEPP 148


>gi|301767368|ref|XP_002919099.1| PREDICTED: putative metalloprotease C21orf57-like [Ailuropoda
           melanoleuca]
          Length = 164

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP             D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRMYREKNIPTDVLSFPFHENIKAGELPQPDFQDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E+ +LE+L
Sbjct: 93  LGVEYIFQQCR-GHEDYYDILTVTATHGLCHLLGFTHSTEAEWQKMYQKEKQVLEEL 148


>gi|237751248|ref|ZP_04581728.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229372614|gb|EEO23005.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 200

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS-SLMLGDIVLAYEIIEIEA 115
           + L+F DS  ++ LN +Y   D PT+VLSFP      +       LG I++    +  +A
Sbjct: 80  IELIFVDSESMQELNKQYMAKDYPTDVLSFPLEIQDIESSDMPQCLGSIIINIYEVCDKA 139

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
            +           L IH FLHLLG+DH  D        +E++I+E LG+ D
Sbjct: 140 ALYKHNPYAEFSLLFIHAFLHLLGFDHECDNGEQ--RAVEQAIIESLGLPD 188


>gi|116749595|ref|YP_846282.1| hypothetical protein Sfum_2165 [Syntrophobacter fumaroxidans MPOB]
 gi|116698659|gb|ABK17847.1| protein of unknown function UPF0054 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 122

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S++  D   +  LN  YR  D  T+VLSFP            +LGD+V+   + +    
Sbjct: 1   MSILIVDDEEMAGLNSTYRRKDTSTDVLSFPMREGEFGDVCEEVLGDVVICAPMAKRMGE 60

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLG 163
           + G  F++ +  L++HG LHL+G+DH     +A  M      +L+ LG
Sbjct: 61  LHGASFQSVMDLLLVHGILHLVGHDHEQGRGEAARMADKTMELLKMLG 108


>gi|121613427|ref|YP_999845.1| putative metalloprotease [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167004816|ref|ZP_02270574.1| hypothetical protein Cjejjejuni_00700 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|145572759|sp|A1VXK4|RRMF_CAMJJ RecName: Full=Probable rRNA maturation factor
 gi|87250280|gb|EAQ73238.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 81-176]
          Length = 134

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L S   F+    VEL  VF DS  ++ +N E R  DK T+VLSFP          SL LG
Sbjct: 11  LESIASFLGPKDVEL--VFVDSKEMQEINLEQRKQDKTTDVLSFPLENID----ESLPLG 64

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +V+  ++ + +A  LG  +E  +  L IH  LHLLG+DH +D     M   E+ ++E  
Sbjct: 65  SVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDHENDN--GEMREKEKELIEYF 122

Query: 163 GIN 165
            + 
Sbjct: 123 NLP 125


>gi|116515199|ref|YP_802828.1| YbeY [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|122285405|sp|Q057G4|RRMF_BUCCC RecName: Full=Probable rRNA maturation factor
 gi|116257053|gb|ABJ90735.1| predicted metal-dependent hydrolase [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 156

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 15/169 (8%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLV 60
           M++KK NL ++D+Q   +  ++             F K     +      K   +E+++ 
Sbjct: 1   MNIKK-NLMKIDIQNVCKKNIF-------------FPKKKYFFLWLKNIFKNKKIEITIR 46

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL-MLGDIVLAYEIIEIEANVLG 119
             D   ++ LN +Y+  +  TNVLSF +  +       L  +GDI+L    I  EAN+L 
Sbjct: 47  IVDMLEMKFLNKKYKKKNSLTNVLSFQSPDSIKIKHRFLNYIGDIILCAPYINKEANILK 106

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           K+      H+ IH  LHLL Y H D K    M+  E  I++ LG N+PY
Sbjct: 107 KKKIELWAHMTIHSTLHLLHYSHKDSKSKKNMQKTEIYIMKKLGYNNPY 155


>gi|297380337|gb|ADI35224.1| conserved hypothetical protein [Helicobacter pylori v225d]
          Length = 140

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 12/141 (8%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           EI  +T  E  F      L+ K   V      + LV      +  +N + RG D  T+VL
Sbjct: 3   EIDSQTPLESDFL-----LLEKIANVLAPTQTIELVLVSDETMREINRDLRGCDYATDVL 57

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SFP      +      LG +V+   + +  A  LG   E  +  L IHG LHLLGYDH  
Sbjct: 58  SFPL-----EAIPHTPLGSVVINMPLAQTNAMKLGHSLEEEIALLFIHGVLHLLGYDH-- 110

Query: 145 DKDACVMEGLERSILEDLGIN 165
           +KD       E  +++   + 
Sbjct: 111 EKDKGEQRQKESELIKAFNLP 131


>gi|157414434|ref|YP_001481690.1| putative metalloprotease [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385398|gb|ABV51713.1| hypothetical protein C8J_0114 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747078|gb|ADN90348.1| Putative metalloprotease [Campylobacter jejuni subsp. jejuni M1]
 gi|315931515|gb|EFV10482.1| uncharacterized protein family UPF0054 family protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 134

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L S   F+    VEL  VF DS  ++ +N E R  DK T+VLSFP          SL LG
Sbjct: 11  LESIASFLSPKDVEL--VFVDSKEMQEINLEQRKQDKTTDVLSFPLENID----ESLPLG 64

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +V+  ++ + +A  LG  +E  +  L IH  LHLLG+DH +D     M   E+ ++E  
Sbjct: 65  SVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDHENDN--GEMREKEKELIEHF 122

Query: 163 GIN 165
            + 
Sbjct: 123 NLP 125


>gi|108760629|ref|YP_632898.1| cupin domain-containing protein [Myxococcus xanthus DK 1622]
 gi|123374295|sp|Q1D375|RRMF_MYXXD RecName: Full=Probable rRNA maturation factor
 gi|108464509|gb|ABF89694.1| cupin domain protein [Myxococcus xanthus DK 1622]
          Length = 294

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 59/151 (39%), Gaps = 24/151 (15%)

Query: 34  VVFAKAVSNLISKGYFVKE-NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
             FA+ ++          E + VELSL   D   I  LN  +R  DK T+VLSFP     
Sbjct: 145 RDFARLLTTWARAYLVQLELSGVELSLSLVDDRAIRRLNRTWRKKDKATDVLSFPAGDLP 204

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII-----------HGFLHLLGYD 141
                   LGD+V++ +  + +A   G+  E+ +   +                      
Sbjct: 205 KGTPGPRPLGDVVISLDTAKRQAKEYGRTLESEMARYLAHGLLHLLGHDH---------- 254

Query: 142 HVDDKDACVMEGLERSILEDLG-INDPYEVD 171
               +DA  M  LE  +L + G + D  +VD
Sbjct: 255 -ERPRDAKRMAALEEQLLGERGMVADSLQVD 284


>gi|193216879|ref|YP_002000121.1| hypothetical protein MARTH_orf636 [Mycoplasma arthritidis 158L3-1]
 gi|193002202|gb|ACF07417.1| conserved hypothetical protein [Mycoplasma arthritidis 158L3-1]
          Length = 106

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 66  RIETLNFEYRGIDKPTNVLSFPTA-FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +++ LN  +R  +  T++LSFP       +    L LG I+++   I+ +A       + 
Sbjct: 4   KMKKLNRHFRNKNYVTDILSFPLEGLEELNFLEVLPLGQIIMSPWKIKKQAKEFNHSLKR 63

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              ++  HG  HL G+DH  + +A +M     +I+  L I
Sbjct: 64  EFCYIFAHGIAHLFGFDHQTEDEAKIMNAHVDNIMNKLNI 103


>gi|86153617|ref|ZP_01071820.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|85842578|gb|EAQ59790.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni HB93-13]
          Length = 134

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L S   F+    VEL  VF DS  ++ +N E R  DK T+VLSFP          SL LG
Sbjct: 11  LESIASFLSPKDVEL--VFVDSKEMQEINLEQRKQDKTTDVLSFPLENID----ESLPLG 64

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +V+  ++ + +A  LG  +E  +  L IH  LHLLG+DH +D     M   E+ ++E  
Sbjct: 65  SVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDHENDN--GEMREKEKELIEYF 122

Query: 163 GIN 165
            + 
Sbjct: 123 NLP 125


>gi|227872335|ref|ZP_03990689.1| possible metal-dependent hydrolase [Oribacterium sinus F0268]
 gi|227841818|gb|EEJ52094.1| possible metal-dependent hydrolase [Oribacterium sinus F0268]
          Length = 141

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 16/136 (11%)

Query: 45  SKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS------ 98
           S  Y      V LS+ F +S  +  LN   RGID  T+VLSFP       G         
Sbjct: 4   SLDYVSCPYDVSLSVSFIESEEMRELNLSQRGIDYATDVLSFPLLSLDPPGSFPESLEEE 63

Query: 99  ----------LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                     LMLGDIVL ++ ++ +A   G   E  L  LI H  LHL  YDH+++++ 
Sbjct: 64  WGNFDPETGELMLGDIVLNWDKVKEQAESYGHSLERELAFLIAHSLLHLFSYDHMEEEER 123

Query: 149 CVMEGLERSILEDLGI 164
             ME  +  ILE+ G 
Sbjct: 124 KEMEQKQEEILENRGY 139


>gi|33864330|ref|NP_895890.1| hypothetical protein PMT2065 [Prochlorococcus marinus str. MIT
           9313]
 gi|46577390|sp|Q7V498|RRMF_PROMM RecName: Full=Probable rRNA maturation factor
 gi|33641110|emb|CAE22239.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 187

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            L    E V  +    L          ++ L L  TD   I  LN  +R   + T+VLSF
Sbjct: 46  DLTAWIESV--RRDPTLTCPEIVRLSPMLSLGLQLTDDATITELNHSWRQRSESTDVLSF 103

Query: 87  PTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           P    S      + + LGDIV++ +  + +A     E    L  L+ HG LHLLG+DH  
Sbjct: 104 PALDNSLVLPTDTCVELGDIVVSVQTAQRQAKQHSHELGLELRWLVSHGLLHLLGWDHPT 163

Query: 145 DKDACVMEGLERSIL 159
           D+    M   +  +L
Sbjct: 164 DQSLKTMLSYQEQLL 178


>gi|222099958|ref|YP_002534526.1| Putative metalloprotease [Thermotoga neapolitana DSM 4359]
 gi|254807298|sp|B9K877|RRMF_THENN RecName: Full=Probable rRNA maturation factor
 gi|221572348|gb|ACM23160.1| Putative metalloprotease [Thermotoga neapolitana DSM 4359]
          Length = 149

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 9/123 (7%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
               K++S  + +    +   V  +++     +I+ +N E+RG D PT+VL+FP      
Sbjct: 11  KEILKSLSEKLDEIVKKEIGNVNTNVILVSKDQIKEMNREFRGEDFPTDVLTFPLFEE-- 68

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVME 152
                 + G+I +  E++E  A      FE  L+ ++IHG LHL GYDH  +DK+A  M 
Sbjct: 69  ------VYGEIYICPEVVEENAKEYNNTFEKELIEVVIHGILHLAGYDHEFEDKNAKEMF 122

Query: 153 GLE 155
             +
Sbjct: 123 EKQ 125


>gi|260910780|ref|ZP_05917432.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260635102|gb|EEX53140.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 140

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  +        +  +          + E+  +F +  +I  +N EY G D  T+V
Sbjct: 7   DGVKMPKIKRKDTTAWIKAV---AQTYGRKVGEVGYMFVNDEKILEINNEYLGHDYYTDV 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F            ++ GDIV++ + +   A + GK +E+ L  +IIHG LHL G +  
Sbjct: 64  ITFDYDEGD------VVNGDIVISLDTVRTNAEMFGKAYEDELYRVIIHGILHLCGLNDK 117

Query: 144 DDKDACVMEGLERSILE 160
              +  +ME  E   LE
Sbjct: 118 GPGEREIMEKAENKALE 134


>gi|307298543|ref|ZP_07578346.1| protein of unknown function UPF0054 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915708|gb|EFN46092.1| protein of unknown function UPF0054 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 142

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 16/153 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++QI  + +   +E  +  + E V          K    +  I  L+L+FTD   I ++
Sbjct: 1   MEIQIQNKTSKKIEESRISNIVEKVV---------KAELGERKIGMLNLLFTDDSEIRSI 51

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+R  D+PT+VLSF        G    ++GDIV++ E I  +A   G  FE  L +++
Sbjct: 52  NKEFRHRDEPTDVLSFQY------GLEEEIVGDIVISLERISEQAGEFGNSFEEELYYIL 105

Query: 131 IHGFLHLLGYDHVD-DKDACVMEGLERSILEDL 162
           IHG LH+LG+ H   D +   +  L+R+  +  
Sbjct: 106 IHGVLHVLGHTHEGYDDEGEEIFSLQRNYYKRF 138


>gi|153952235|ref|YP_001397375.1| putative metalloprotease [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939681|gb|ABS44422.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 135

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L S   F+    VEL  VF DS  ++ +N E R  DK T+VLSFP          SL LG
Sbjct: 11  LESIASFLGPKDVEL--VFVDSKEMQEINLEQRKQDKTTDVLSFPLENID----ESLPLG 64

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +V+  ++ + +A  LG  +E  +  L IH  LHLLG+DH +D     M   E+ ++E  
Sbjct: 65  SVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDHENDN--GEMREKEKELIEHF 122

Query: 163 GIN 165
            + 
Sbjct: 123 NLP 125


>gi|325181482|emb|CCA15916.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 165

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDGCSSLMLGD 103
            +   +LS++ T   ++  LN ++R  DK T++LSFP+        F +        LGD
Sbjct: 37  PKYPWDLSVILTTDQQLHRLNKQFRKQDKTTDILSFPSHNINQPGRFPNVRTPEDRYLGD 96

Query: 104 IVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           I ++   ++   +  G +    +  L  HG  HL+GYDH  D++   M   E  +L 
Sbjct: 97  IYISLPYVKKYCDEEGTDINEQMRVLFAHGICHLMGYDHETDQEHERMAKAEDYLLR 153


>gi|3643597|gb|AAC42244.1| hypothetical protein [Arabidopsis thaliana]
          Length = 343

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 30/162 (18%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEV-------VFAKAVSNLISKGYFVKE---------N 53
            L + I +E  L  D++ ++ + E+           A + L    Y  +E          
Sbjct: 83  ELSVSICIEEQL-PDDLEIQNIAEMLRLNVPMAMTLAFNGLKDSKYKTRETDIEDLGGYE 141

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI 113
            VELS++  +   I  LN E+RG D  T+VLS             LM+GD+V++ E    
Sbjct: 142 TVELSVMLCNDDFICKLNKEWRGEDHATDVLSMSQHVPEL-KLPVLMMGDLVISVETAAR 200

Query: 114 EANVLGKEFENHLVHLI------------IHGFLHLLGYDHV 143
           +A   G    + +  L+            IHG LHLLG+DH 
Sbjct: 201 QAAERGHTLLDEIRILVSLFADTLNVFSKIHGLLHLLGFDHE 242


>gi|225389159|ref|ZP_03758883.1| hypothetical protein CLOSTASPAR_02905 [Clostridium asparagiforme
           DSM 15981]
 gi|225044776|gb|EEG55022.1| hypothetical protein CLOSTASPAR_02905 [Clostridium asparagiforme
           DSM 15981]
          Length = 140

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 21/145 (14%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I +E   +  E  L    E +    V+  +   Y       E++++ TD+  I+ +N 
Sbjct: 1   MTITIE---YEAEKQLDLPYEDIIRDVVNESLD--YEKCPYEAEVNVILTDNQAIQEINR 55

Query: 73  EYRGIDKPTNVLSFPTAFAS----------------SDGCSSLMLGDIVLAYEIIEIEAN 116
           E+R ID PT+VLSFP                     +     LMLGDIV++ + +E +A 
Sbjct: 56  EHRQIDAPTDVLSFPMVDYEAPSDFDHVEDAVEDYFNPETGELMLGDIVISVDKVEEQAE 115

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYD 141
             G      L  L+ H  LHL GYD
Sbjct: 116 KYGHSQTRELAFLVAHSMLHLCGYD 140


>gi|32491196|ref|NP_871450.1| hypothetical protein WGLp447 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173416|sp|Q8D2A7|RRMF_WIGBR RecName: Full=Probable rRNA maturation factor
 gi|25166403|dbj|BAC24593.1| ybeY [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 152

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 39  AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS 98
                I   +   + + E++L   +   I+ LN ++   + PTN+L+FP    ++D  S 
Sbjct: 23  KFKFWIKSIFLHFKKVSEINLRLVEKKEIKNLNKKFLKKNYPTNILAFPCIMPNNDQIS- 81

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA-CVMEGLERS 157
             LGD+V+  EI+E EA    K  E+H  H+IIHG LHLLGYDH ++ +    ME LE  
Sbjct: 82  -FLGDLVVCSEIVEKEAKNQNKSVESHWAHIIIHGTLHLLGYDHSNNSNKIEEMEILEIK 140

Query: 158 ILEDLGINDPY 168
            L   G ++PY
Sbjct: 141 FLNLFGYHNPY 151


>gi|169331623|ref|ZP_02860816.1| hypothetical protein ANASTE_00007 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259685|gb|EDS73651.1| hypothetical protein ANASTE_00007 [Anaerofustis stercorihominis DSM
           17244]
          Length = 152

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 6/128 (4%)

Query: 17  VENALWGDEIHLRTLCEVVFAK---AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           +E  +  D    + + E  + K   A++  +    F K +  ++S+   +S  I+TLN  
Sbjct: 2   IETEVLFDNRSGKDVSEETYNKIQLAINKTLEYENFKKPS--QVSVSLVNSEEIKTLNNY 59

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           YR IDK T+VLSFP      +    ++LGD+VL  +  + +A   G   +  + +L +H 
Sbjct: 60  YRNIDKTTDVLSFPMDDDEFED-EVIILGDVVLCLDKAKEQAIEFGHSLDREICYLTVHS 118

Query: 134 FLHLLGYD 141
            LHLLG+D
Sbjct: 119 TLHLLGFD 126


>gi|282858165|ref|ZP_06267360.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
 gi|282584087|gb|EFB89460.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
          Length = 190

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 8/163 (4%)

Query: 1   MSVKKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGY--FVKENIVELS 58
           +  ++   P   + IA  +      + L       F +  ++L    +  +     V++S
Sbjct: 6   LKQRRRKNPEARILIAS-DIEQDPLLTLAKTNIATFERLAADLYDVHWPVWRAHGGVQIS 64

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPT-----AFASSDGCSSLMLGDIVLAYEIIEI 113
           L F D  R+  +N EYR    PT+VLSFP       F        L+LGDIV+   +I  
Sbjct: 65  LQFLDETRMAEVNSEYRQTHAPTDVLSFPLFEKEGRFVPDAQLPPLLLGDIVVCPAVIRK 124

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            A       E+ L  ++ HG LHLL +DH   +    M  ++ 
Sbjct: 125 NAVERRVSEESELALVVFHGILHLLAWDHDTPEKQERMWSVQE 167


>gi|269926173|ref|YP_003322796.1| protein of unknown function UPF0054 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789833|gb|ACZ41974.1| protein of unknown function UPF0054 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 131

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           +S++ TD  +I  L+ E+ GI+ PT+V+S+P++    +      LGDI ++ E  E +A 
Sbjct: 14  VSILLTDDDQIAKLHLEHMGIEGPTDVMSWPSSDFERENFH--FLGDIAVSCETAEAQAR 71

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
             G   E  +  L +HG LHLLG+D    ++   M+     I+  
Sbjct: 72  DQGHPVETEVSVLAVHGLLHLLGWDDQTPQEREEMQKRVDYIVSK 116


>gi|83944997|ref|ZP_00957363.1| hypothetical protein OA2633_10219 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851779|gb|EAP89634.1| hypothetical protein OA2633_10219 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 158

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 70/156 (44%), Gaps = 12/156 (7%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++  VE   W     L   C       ++ +               ++F+D   +  LN 
Sbjct: 11  VEFVVEADAWSGHDGLMRACLQAIEAGLNAIEDPRAGAAV------ILFSDDATVHELNR 64

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            +R  DK TNVLSFP              GD++LAYE    EA        +H  HL +H
Sbjct: 65  RFRDKDKSTNVLSFPAPEREGYP------GDVILAYETCAKEAQAAAISLIDHAAHLALH 118

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           G LHL G+DH ++ +A  ME LE ++L  LGI DPY
Sbjct: 119 GVLHLNGFDHQEEDEAAAMEALETAVLTGLGIQDPY 154


>gi|330836438|ref|YP_004411079.1| metalloprotease ybeY [Spirochaeta coccoides DSM 17374]
 gi|329748341|gb|AEC01697.1| metalloprotease ybeY [Spirochaeta coccoides DSM 17374]
          Length = 153

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           G E+   +  E V    +S ++S    +    VE+S  F     I  LN E+R  D+ T+
Sbjct: 11  GQEMFKESYPEDVILDRISGILSD---LGLENVEMSCSFVSDEEIRRLNAEWRDRDESTD 67

Query: 83  VLSFPTA----FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLL 138
           +LSF         S+DG    MLGD+V++ E ++  +       +  L  L++HG LHLL
Sbjct: 68  ILSFVQEDGEAMPSADGNEWRMLGDLVISPESLKRNSEYFTVSLDEELHRLLVHGMLHLL 127

Query: 139 GYDHVDDKDACVMEGLERSILEDL 162
           G DH  +     M   +  +L  L
Sbjct: 128 GDDHATNDPQEPMLIRQEEMLRRL 151


>gi|268679311|ref|YP_003303742.1| hypothetical protein Sdel_0671 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617342|gb|ACZ11707.1| protein of unknown function UPF0054 [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 140

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ LVF +S  +  LN E+RG+DK T+VLSFP      D      LG IV+ YE  + +A
Sbjct: 28  EVELVFINSADMHALNLEHRGVDKTTDVLSFPI-----DDFPHAPLGSIVINYEYAKEKA 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             LG   E+ +  L IHG LHLLGYDH  + D   M   E++++E   + 
Sbjct: 83  LALGHSHEDEITLLFIHGMLHLLGYDH--EVDQGEMREKEKALIEQYALP 130


>gi|308183263|ref|YP_003927390.1| putative metalloprotease [Helicobacter pylori PeCan4]
 gi|308065448|gb|ADO07340.1| putative metalloprotease [Helicobacter pylori PeCan4]
          Length = 140

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      +  +N + RG D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSDETMREINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQTNAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   E+ +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLGHSLEDEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|157818335|ref|NP_001101999.1| hypothetical protein LOC361822 [Rattus norvegicus]
 gi|149043696|gb|EDL97147.1| similar to RIKEN cDNA A130042E20; open reading frame 57 (predicted)
           [Rattus norvegicus]
          Length = 164

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP         F          LGD+ 
Sbjct: 33  KKFDLGIICVDNKNIQNINRIYRNKNVPTDVLSFPFHENLKAGEFPQPRSPDDYNLGDVF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  E I  +     +++ + L     HG  HLLG+ H  + +   M   E+ +LE+L
Sbjct: 93  LGVEYI-FQYCKGNEDYYDVLTVTATHGLCHLLGFTHSSEAEWQKMYNQEKLVLEEL 148


>gi|303237783|ref|ZP_07324341.1| translation metalloprotein YbeY [Prevotella disiens FB035-09AN]
 gi|302482008|gb|EFL45045.1| translation metalloprotein YbeY [Prevotella disiens FB035-09AN]
          Length = 142

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L  + +    K +  +        + + E+  +F D  +I  +N EY G D  T+V++
Sbjct: 9   VKLPKIGKRETTKWIKAVAETH---GKKVGEIGYMFVDDEKILEVNNEYLGHDYYTDVIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F     +       + GDIV++ + +   A   GK +E  L  +IIHG LHL G +    
Sbjct: 66  FDYCEENE------LNGDIVISLDTVRTNAEKFGKTYEEELYRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L  L
Sbjct: 120 GEREIMEENENKALAIL 136


>gi|310779143|ref|YP_003967476.1| protein of unknown function UPF0054 [Ilyobacter polytropus DSM
           2926]
 gi|309748466|gb|ADO83128.1| protein of unknown function UPF0054 [Ilyobacter polytropus DSM
           2926]
          Length = 154

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 5/156 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            L L+I  E   + ++I +         K +  ++ + Y   +  V +S++ TD+  I+ 
Sbjct: 2   ELVLEIGNETEGYEEKIDISN-----VEKYIKGVLEEEYPEAKKPVYISMLLTDNENIQI 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N +YRG D PT+V+SF       +      LGDIV++ E +E +A   G  F+    ++
Sbjct: 57  VNRDYRGKDTPTDVISFAYHETEFEIGPYDTLGDIVISLERVEEQAEDYGHNFQREFYYV 116

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + HG LHLLGYDH++D+D  +M   E  IL+  G  
Sbjct: 117 LTHGLLHLLGYDHIEDEDKSIMREKEEEILKKHGYT 152


>gi|203283986|ref|YP_002221726.1| hypothetical protein BDU_64 [Borrelia duttonii Ly]
 gi|226701634|sp|B5RKV9|RRMF_BORDL RecName: Full=Probable rRNA maturation factor
 gi|201083429|gb|ACH93020.1| uncharacterized conserved protein [Borrelia duttonii Ly]
          Length = 148

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 7/148 (4%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I  E  LW + +  R           + ++S   F+     ELS++  ++  I+ LN E+
Sbjct: 2   IKEELNLWAEGVEFRHWD-----AYYNFILSVLNFLCIKEYELSVILCNNEYIQKLNGEF 56

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R   +PT+VLSF   F  S+  +  + GDI+++ E +E  +     E    L    IHG 
Sbjct: 57  RQKPEPTDVLSFNY-FEGSEQINHKIQGDIIISLEYLEFSSLEFNVEMYEELQRNTIHGI 115

Query: 135 LHLLGYDH-VDDKDACVMEGLERSILED 161
           LHL+GY H  +D     M  ++  +L +
Sbjct: 116 LHLIGYTHDTNDFQNETMLIIQERVLRE 143


>gi|282880546|ref|ZP_06289253.1| metalloprotein, YbeY/ UPF0054family [Prevotella timonensis CRIS
           5C-B1]
 gi|281305649|gb|EFA97702.1| metalloprotein, YbeY/ UPF0054family [Prevotella timonensis CRIS
           5C-B1]
          Length = 137

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 9/138 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            D + +  + +   +  +  + +        I E+  +F D  +I  +N EY G D  T+
Sbjct: 6   ADGVKMPNIKKRETSAWIKAVAAT---YGRKIGEVGYMFVDDKKILEVNNEYLGHDYYTD 62

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           V++F      +      + GDIV++ + +   A + GK +E  L  +IIHG LHL G + 
Sbjct: 63  VITFDYDEGDT------VNGDIVISLDTVRTNAELFGKTYEEELHRVIIHGILHLCGIND 116

Query: 143 VDDKDACVMEGLERSILE 160
               +   ME  E   L 
Sbjct: 117 KGPGEREQMEAAENKALA 134


>gi|307247949|ref|ZP_07529982.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|306855553|gb|EFM87723.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
          Length = 405

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +DLQIA EN+      +L +L ++      + L  +         E+++   D      
Sbjct: 1   MIDLQIACENSE-----NLPSLEQLTLWVQ-TALAYEAQTEDFPETEMTIRIVDEAESHE 54

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H 
Sbjct: 55  LNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESHC 109


>gi|220702590|pdb|1TVI|A Chain A, Solution Structure Of Tm1509 From Thermotoga Maritima:
           Vt1, A Nesgc Target Protein
          Length = 172

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKEN---IVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           +R L E   +K + NL  K   + +     V ++++      I+ LN ++RG D+PT+VL
Sbjct: 24  IRILGEGKGSKLLENLKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRGQDRPTDVL 83

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV- 143
           +FP            + G+I +   I+E  A      FE  L+ ++IHG LHL GYDH  
Sbjct: 84  TFPLMEED-------VYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEF 136

Query: 144 DDKDACVMEGLERSILED 161
           +DK++  M   ++  +E+
Sbjct: 137 EDKNSKEMFEKQKKYVEE 154


>gi|203287529|ref|YP_002222544.1| hypothetical protein BRE_63 [Borrelia recurrentis A1]
 gi|226701633|sp|B5RQN9|RRMF_BORRA RecName: Full=Probable rRNA maturation factor
 gi|201084749|gb|ACH94323.1| uncharacterized conserved protein [Borrelia recurrentis A1]
          Length = 148

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 7/148 (4%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I  E  LW + +  R L         + ++S   F+     ELS++  ++  I+ LN E+
Sbjct: 2   IKEELNLWAEGVEFRHLD-----AYYNFILSVLNFLCIKEYELSVILCNNEYIQKLNGEF 56

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R   +PT+VLSF   F  S+  +  + GDIV++ E +E  +     E    L    IHG 
Sbjct: 57  RQKPEPTDVLSFNY-FEGSEQINHKIQGDIVISLEYLEFSSLEFNVEMYEELQRNTIHGI 115

Query: 135 LHLLGYDH-VDDKDACVMEGLERSILED 161
           LHL+GY H  +D     M  ++  +L +
Sbjct: 116 LHLIGYTHDTNDFQNETMLIIQERVLRE 143


>gi|307261440|ref|ZP_07543111.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|306868835|gb|EFN00641.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
          Length = 405

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +DLQIA EN+      +L +L ++      + L  +         E+++   D      
Sbjct: 1   MIDLQIACENSE-----NLPSLEQLTLWVQ-TALAYEAQTEDFPETEMTIRIVDEAESHE 54

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H 
Sbjct: 55  LNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESHC 109


>gi|307250205|ref|ZP_07532161.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|306857734|gb|EFM89834.1| Acetyltransferase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
          Length = 405

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +DLQIA EN+      +L +L ++      + L  +         E+++   D      
Sbjct: 1   MIDLQIACENSE-----NLPSLEQLTLWVQ-TALAYEAQTEDFPETEMTIRIVDEAESHE 54

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN  YRG DKPTNVLSFP  F   +G    +LGD+V+  +++E E        E+H 
Sbjct: 55  LNLTYRGKDKPTNVLSFP--FEVPEGIELPLLGDLVICRQVVEKEVEEQQISLESHC 109


>gi|57237128|ref|YP_178140.1| putative metalloprotease [Campylobacter jejuni RM1221]
 gi|86149543|ref|ZP_01067773.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|86151268|ref|ZP_01069483.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|88597229|ref|ZP_01100464.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|205356496|ref|ZP_03223260.1| hypothetical protein Cj8421_0120 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218561802|ref|YP_002343581.1| putative metalloprotease [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315123723|ref|YP_004065727.1| hypothetical protein ICDCCJ07001_114 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|46577566|sp|Q9PJ06|RRMF_CAMJE RecName: Full=Probable rRNA maturation factor
 gi|62901174|sp|Q5HX45|RRMF_CAMJR RecName: Full=Probable rRNA maturation factor
 gi|57165932|gb|AAW34711.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           RM1221]
 gi|85839811|gb|EAQ57070.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|85841615|gb|EAQ58862.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|88190290|gb|EAQ94264.1| conserved hypothetical protein TIGR00043 [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112359508|emb|CAL34292.1| conserved hypothetical protein Cj0121 [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|205345683|gb|EDZ32322.1| hypothetical protein Cj8421_0120 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|284925414|gb|ADC27766.1| putative metalloprotease [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315017445|gb|ADT65538.1| hypothetical protein ICDCCJ07001_114 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315057561|gb|ADT71890.1| predicted metal-dependent hydrolase [Campylobacter jejuni subsp.
           jejuni S3]
 gi|315926941|gb|EFV06303.1| uncharacterized protein family UPF0054 family protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 135

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L S   F+    VEL  VF DS  ++ +N E R  DK T+VLSFP          SL LG
Sbjct: 11  LESIASFLSPKDVEL--VFVDSKEMQEINLEQRKQDKTTDVLSFPLENID----ESLPLG 64

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +V+  ++ + +A  LG  +E  +  L IH  LHLLG+DH +D     M   E+ ++E  
Sbjct: 65  SVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDHENDN--GEMREKEKELIEHF 122

Query: 163 GIN 165
            + 
Sbjct: 123 NLP 125


>gi|257469443|ref|ZP_05633535.1| metal-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|317063687|ref|ZP_07928172.1| metal-binding protein [Fusobacterium ulcerans ATCC 49185]
 gi|313689363|gb|EFS26198.1| metal-binding protein [Fusobacterium ulcerans ATCC 49185]
          Length = 155

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E    K +   + +  F  +  V LS++FT +  I+ +N +YRG D+PT+V+SF      
Sbjct: 20  EEEMKKYIKEAL-ESEFESDRPVYLSILFTGNEEIQVINKQYRGKDQPTDVISFAYHETE 78

Query: 93  SDGCSSLM-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                    LGDIV++ E ++ +A       +  L +++ HG LHLLGYDH+++ D   M
Sbjct: 79  DFDIGPYDTLGDIVISMERVDEQAAEYNHSPKRELYYVLTHGLLHLLGYDHIEEDDKKEM 138

Query: 152 EGLERSILEDLGIN 165
              E  IL   G  
Sbjct: 139 RAREEEILGQFGYT 152


>gi|148887457|sp|Q4A620|RRMF_MYCS5 RecName: Full=Probable rRNA maturation factor
 gi|144575092|gb|AAZ43801.2| conserved hypothetical protein [Mycoplasma synoviae 53]
          Length = 155

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 36  FAKAVSNLIS--KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FAS 92
           F K +  +++    YF     + L +    S+    LNFEYR  DK T++LSF    F  
Sbjct: 20  FEKEMHEILNNFAKYFKINKQIILDVSIVSSYTSRKLNFEYRQKDKTTDILSFGYDDFDL 79

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
            D    L LG++V+    I+ +A +     +   ++L  HG +HL GYDH  +K+   M+
Sbjct: 80  YDKMPFLNLGELVICNNKIKKQAIIFNHSIKREFLYLFTHGLVHLYGYDHQSEKEKKEMD 139

Query: 153 GLERSILEDLGIN 165
            +  SI   L I 
Sbjct: 140 FIVDSIFNPLKIT 152


>gi|315587050|gb|ADU41431.1| probable metalloprotease [Helicobacter pylori 35A]
          Length = 142

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +   +    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANALAPTQI----------------IELVLVSDKTMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP      +      LG +V+   + +  A  LG   E+ +  L IH
Sbjct: 46  DLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQTNALKLGHSLEDEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|34556974|ref|NP_906789.1| putative metalloprotease [Wolinella succinogenes DSM 1740]
 gi|46577355|sp|Q7MSD7|RRMF_WOLSU RecName: Full=Probable rRNA maturation factor
 gi|34482689|emb|CAE09689.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 140

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 7/110 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ L+  D   +  +N E+RGIDK T+VLSFP      +G   L LG I+L+ + +  EA
Sbjct: 28  EVELILLDDEAMRKINQEHRGIDKSTDVLSFPL-----EGGDFLPLGSILLSIDRVRAEA 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            + G   E     L IHG LHLLGYDH  D+        E  ++   G+ 
Sbjct: 83  ELRGHSIEAEAALLFIHGMLHLLGYDHEYDQGEQ--RFKEEELITRFGLP 130


>gi|15645774|ref|NP_207951.1| putative metalloprotease [Helicobacter pylori 26695]
 gi|6647979|sp|O25775|RRMF_HELPY RecName: Full=Probable rRNA maturation factor
 gi|2314318|gb|AAD08206.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 140

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + LV      I  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSDETIREINK 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP      +      LG +V+   + +  A  LG   EN +  L IH
Sbjct: 46  DLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|108563524|ref|YP_627840.1| putative metalloprotease [Helicobacter pylori HPAG1]
 gi|122386286|sp|Q1CSA6|RRMF_HELPH RecName: Full=Probable rRNA maturation factor
 gi|107837297|gb|ABF85166.1| hypothetical protein HPAG1_1099 [Helicobacter pylori HPAG1]
          Length = 140

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP      +      LG +V+   + +  A  LG   EN +  L IH
Sbjct: 46  DLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|219684794|ref|ZP_03539736.1| conserved hypothetical protein [Borrelia garinii PBr]
 gi|219685335|ref|ZP_03540154.1| conserved hypothetical protein [Borrelia garinii Far04]
 gi|219671739|gb|EED28794.1| conserved hypothetical protein [Borrelia garinii PBr]
 gi|219673108|gb|EED30128.1| conserved hypothetical protein [Borrelia garinii Far04]
          Length = 152

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML---GDIVLAYEI 110
             ELS++  D+  I+ LN ++R  ++PT+VLSF     + D    +     GDI++++E 
Sbjct: 36  DFELSVILCDNVYIQKLNNKFRNKNEPTDVLSFNYNELNEDLVDGINYKIQGDIIISFEY 95

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
           ++  A     E    L  + IHG LHL+G++H   D     M  L+ ++L  
Sbjct: 96  LKFSAQEFNVEIYEELQRVTIHGILHLMGHNHETNDFQKEGMLILQENVLRK 147


>gi|54607131|ref|NP_766138.3| rRNA maturation factor homolog [Mus musculus]
 gi|47115797|sp|Q8CAV0|YBEY_MOUSE RecName: Full=rRNA maturation factor homolog
 gi|26332258|dbj|BAC29859.1| unnamed protein product [Mus musculus]
 gi|74202099|dbj|BAE23037.1| unnamed protein product [Mus musculus]
 gi|148699903|gb|EDL31850.1| RIKEN cDNA A130042E20 [Mus musculus]
          Length = 164

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 8/117 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSF          F          LGDI 
Sbjct: 33  KKFDLGIICVDNKTIQNINRIYRNKNVPTDVLSFSFHENLKAGEFPQPHSPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  E I        +++ + L     HG  HLLG+ H    +   M   E+ +LE+L
Sbjct: 93  LGVEYILQHCRE-SEDYCDVLTVTATHGLCHLLGFTHSSKAEWQKMYNQEKLVLEEL 148


>gi|281422349|ref|ZP_06253348.1| putative metalloprotease [Prevotella copri DSM 18205]
 gi|281403580|gb|EFB34260.1| putative metalloprotease [Prevotella copri DSM 18205]
          Length = 144

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  + +   +  +  + +        + E+  +F D  +I  +N EY G D  T+V
Sbjct: 7   DGVKMPKIKKRDTSAWIRKVAASH---GRKVGEIGYMFVDDEKILEVNNEYLGHDYYTDV 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F            ++ GDIV++ + +   A   GK +++ L  +IIHG LHL G +  
Sbjct: 64  ITFDYDEDD------VINGDIVISLDTVRTNAEQFGKTYDDELHRVIIHGILHLCGINDK 117

Query: 144 DDKDACVMEGLERSILEDL 162
              +  +ME  E   L  L
Sbjct: 118 GPGEREIMEENENKALALL 136


>gi|71894404|ref|YP_278512.1| hypothetical protein MS53_0389 [Mycoplasma synoviae 53]
          Length = 159

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 36  FAKAVSNLIS--KGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-FAS 92
           F K +  +++    YF     + L +    S+    LNFEYR  DK T++LSF    F  
Sbjct: 24  FEKEMHEILNNFAKYFKINKQIILDVSIVSSYTSRKLNFEYRQKDKTTDILSFGYDDFDL 83

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
            D    L LG++V+    I+ +A +     +   ++L  HG +HL GYDH  +K+   M+
Sbjct: 84  YDKMPFLNLGELVICNNKIKKQAIIFNHSIKREFLYLFTHGLVHLYGYDHQSEKEKKEMD 143

Query: 153 GLERSILEDLGIN 165
            +  SI   L I 
Sbjct: 144 FIVDSIFNPLKIT 156


>gi|328948521|ref|YP_004365858.1| metalloprotease ybeY [Treponema succinifaciens DSM 2489]
 gi|328448845|gb|AEB14561.1| metalloprotease ybeY [Treponema succinifaciens DSM 2489]
          Length = 164

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML--GDIVLAYEIIEI 113
           E S++F     I+ LN  YR ID PT+VLSF      +D  + + L  GDI ++ + +  
Sbjct: 39  EFSILFCSDEYIQYLNKTYRNIDNPTDVLSFENGEKYTDEDNVVWLQAGDIAISVDTLPK 98

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC------VMEGLERSILEDL 162
            +          L  LIIHG LHL GYDH ++           M   ++ +++D 
Sbjct: 99  NSEYFAVSQNEELKRLIIHGILHLNGYDHGEEHVEKNVEPKCEMLVFQKKLMKDF 153


>gi|317182412|dbj|BAJ60196.1| putative metalloprotease [Helicobacter pylori F57]
          Length = 143

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 23/155 (14%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L L+I  +  L  D + L  +  V+    +                + LV      +  +
Sbjct: 3   LMLEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSDETMREI 46

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N + RG D  T+VLSFP      +      LG +V+   + +  A  LG   E+ +  L 
Sbjct: 47  NRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQTNALKLGHRLEDEIALLF 101

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 102 IHGVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 134


>gi|308062438|gb|ADO04326.1| putative metalloprotease [Helicobacter pylori Cuz20]
          Length = 140

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      +  +N + RG D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSDETMREINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQENAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            L    E  +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLEHSLEEEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|15807086|ref|NP_295815.1| hypothetical protein DR_2092 [Deinococcus radiodurans R1]
 gi|6459888|gb|AAF11642.1|AE002045_2 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 175

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 8/127 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A       LR       + A+ +   +         E+++V      I  L  E+ G D 
Sbjct: 26  ARKRPPAGLRPALRASLSAAMQHFGGEER-------EVTVVLVGDPEIRALKLEHWGEDA 78

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T+VLSFPT +   D      LGDI+++ +  + +A   G      +  L  HG  HL+G
Sbjct: 79  ATDVLSFPT-WEPGDPFMPPHLGDIIISLDTAQRQAESRGHSLTREVALLASHGLTHLVG 137

Query: 140 YDHVDDK 146
           +DH   +
Sbjct: 138 HDHPHAE 144


>gi|34785713|gb|AAH57308.1| RIKEN cDNA A130042E20 gene [Mus musculus]
          Length = 164

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 8/117 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF-------PTAFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSF          F          LGDI 
Sbjct: 33  KKFDLGIICVDNKTIQNINRIYRNKNVPTDVLSFSFHENLKAGEFPQPHSPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  E I        +++ + L     HG  HLLG+ H    +   M   E+ +LEDL
Sbjct: 93  LGVEYILQHCRE-SEDYCDVLTVTATHGLCHLLGFTHSSKAEWQKMYNQEKLVLEDL 148


>gi|257463002|ref|ZP_05627405.1| metal-binding protein [Fusobacterium sp. D12]
 gi|317060616|ref|ZP_07925101.1| metal-binding protein [Fusobacterium sp. D12]
 gi|313686292|gb|EFS23127.1| metal-binding protein [Fusobacterium sp. D12]
          Length = 164

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 1/105 (0%)

Query: 62  TDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGK 120
           T +H+I+ +N E+R  D PT+V+SF               LGDIV++ E +  +A     
Sbjct: 57  TGNHQIQVINREFRQKDSPTDVISFAYHENEDFLVGPYDTLGDIVISLERVGEQAKEYNH 116

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            F     +++ HG LH+LGYDH+D+ D   M   E  IL   G  
Sbjct: 117 SFTREFYYVLTHGILHILGYDHIDENDKREMREREEEILGHFGYT 161


>gi|308063942|gb|ADO05829.1| putative metalloprotease [Helicobacter pylori Sat464]
          Length = 140

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      +  +N + RG D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSDETMREINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQESAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   E  +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLGHSLEEEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKTFNLP 131


>gi|254796633|ref|YP_003081469.1| hypothetical protein NRI_0240 [Neorickettsia risticii str.
           Illinois]
 gi|254589870|gb|ACT69232.1| conserved hypothetical protein [Neorickettsia risticii str.
           Illinois]
          Length = 143

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 12/139 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I + +  W  +I      + +  KA    +      +    E S+V TD   I TLN 
Sbjct: 2   LEIRIIDPRWTKKI---KNLDALLQKAFECCL------EGKKAEFSVVLTDDEFIRTLNK 52

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            YRG D PTNVLSF     +++     ++G+++L+++ + IEA     +FE+HL+H+ IH
Sbjct: 53  NYRGKDAPTNVLSFNY---TNEQIGIGIIGEVILSFDRLVIEALENEIKFEDHLLHMFIH 109

Query: 133 GFLHLLGYDHVDDKDACVM 151
           G LH+LGYDH  DK+   M
Sbjct: 110 GVLHVLGYDHSSDKETLAM 128


>gi|308184901|ref|YP_003929034.1| putative metalloprotease [Helicobacter pylori SJM180]
 gi|308060821|gb|ADO02717.1| putative metalloprotease [Helicobacter pylori SJM180]
          Length = 140

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + R  D  T+VLSFP      +      LG +V+   + +  A  LG   E+ +  L IH
Sbjct: 46  DLRNCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDRGEQRQKEGELIKAFSLP 131


>gi|217032555|ref|ZP_03438045.1| hypothetical protein HPB128_172g18 [Helicobacter pylori B128]
 gi|298735834|ref|YP_003728359.1| Predicted metal-dependent hydrolase [Helicobacter pylori B8]
 gi|216945760|gb|EEC24384.1| hypothetical protein HPB128_172g18 [Helicobacter pylori B128]
 gi|298355023|emb|CBI65895.1| Predicted metal-dependent hydrolase [Helicobacter pylori B8]
          Length = 140

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  + +V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIADVLAPTQI----------------IELVLVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + R  D  T+VLSFP      +      LG +V+   + +  A  LG   EN +  L IH
Sbjct: 46  DLRNCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQENALKLGHSLENEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  ++E   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIEAFNLP 131


>gi|325263892|ref|ZP_08130625.1| putative metalloprotease [Clostridium sp. D5]
 gi|324030930|gb|EGB92212.1| putative metalloprotease [Clostridium sp. D5]
          Length = 165

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 44  ISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS----------- 92
            +  Y       E++L+ T    I  +N  +R IDK T+VLSFP                
Sbjct: 27  AALEYEGCPYEAEINLLLTSDEDIRDMNQMFRQIDKATDVLSFPMLEYQVPGDFSAMEEQ 86

Query: 93  -----SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                +     LMLGDIV++   +  +A   G         LI H  LHL GYDH+++++
Sbjct: 87  SQDCFNPESGELMLGDIVISKNKVLAQAEAYGHSPRREYAFLIAHSMLHLFGYDHMEEEE 146

Query: 148 ACVMEGLERSILEDLGI 164
             +ME  +  ILE++ I
Sbjct: 147 RLLMEQKQNDILENIQI 163


>gi|315929911|gb|EFV09070.1| uncharacterized protein family UPF0054 family protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 135

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L S   F+    VEL  VF DS  ++ +N E R  DK T+VLSFP          SL LG
Sbjct: 11  LESIESFLSPKDVEL--VFVDSKEMQEINLEQRKQDKTTDVLSFPLENID----ESLPLG 64

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            +V+  ++ + +A  LG  +E  +  L IH  LHLLG+DH +D     M   E+ ++E  
Sbjct: 65  SVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDHENDN--GEMREKEKELIEHF 122

Query: 163 GIN 165
            + 
Sbjct: 123 NLP 125


>gi|282878864|ref|ZP_06287631.1| metalloprotein, YbeY/ UPF0054family [Prevotella buccalis ATCC
           35310]
 gi|281299072|gb|EFA91474.1| metalloprotein, YbeY/ UPF0054family [Prevotella buccalis ATCC
           35310]
          Length = 141

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  + +   +  +  + +        I E+  +F D  +I  +N EY G D  T++
Sbjct: 7   DGVKMPKIKKRETSAWIKAVAAT---YGRKIGEVGYMFVDDEKILEVNNEYLGHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F            ++ GDIV++ + +   A   GK +E  L  +IIHG LHL G +  
Sbjct: 64  ITFDYDEGD------IINGDIVISLDTVRTNAERFGKPYEEELYRVIIHGILHLCGINDK 117

Query: 144 DDKDACVMEGLERSILE 160
              +  +ME  E   L 
Sbjct: 118 GPGEREIMEAAEDKALA 134


>gi|300176925|emb|CBK25494.2| unnamed protein product [Blastocystis hominis]
          Length = 166

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASS 93
            ++I     +    V+L++ +  S +I  LN  YR ID PT++LSFPT        +  S
Sbjct: 8   QSVIKFKKLLTAQTVDLTISYITSPQIRELNRVYRNIDSPTDILSFPTHTFITNPGYLPS 67

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           +  +   LGDI +A + +++       +   H   L  HG  HLLG+DHV D+D   M  
Sbjct: 68  EKNTIRSLGDIYIATDYVDLYCKENKIDRFEHFNVLYAHGISHLLGFDHVKDEDYIKMSA 127

Query: 154 LERSILEDL 162
            E+ +L++ 
Sbjct: 128 FEKKLLKEY 136


>gi|149177587|ref|ZP_01856189.1| hypothetical protein PM8797T_00232 [Planctomyces maris DSM 8797]
 gi|148843567|gb|EDL57928.1| hypothetical protein PM8797T_00232 [Planctomyces maris DSM 8797]
          Length = 165

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 16/167 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
            QI ++N+          + E     A+S L+        N  E+SL   D+  I  LN 
Sbjct: 7   FQIEIQNSQ-----THLAIDETQLKTAISFLLQSEQV---NQAEISLAIVDNPTIRQLNQ 58

Query: 73  EYRGIDKPTNVLSF--------PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           +Y   D  T+VLSF         T      G    + G+++++ E+    +       E 
Sbjct: 59  QYLEHDYDTDVLSFLLDCDTAMDTNQVEFRGAGRQIEGEVIVSAEMAVAMSAEYQWPAEQ 118

Query: 125 HLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            L+  +IHG LHL GYD + +++  +M   E+ I +   I+ P   +
Sbjct: 119 ELLLYVIHGLLHLCGYDDLTEEELHIMRQREQQIFDHWQISIPRREE 165


>gi|221633270|ref|YP_002522495.1| hypothetical protein trd_1289 [Thermomicrobium roseum DSM 5159]
 gi|221155563|gb|ACM04690.1| putative conserved hypothetical protein TIGR00043 [Thermomicrobium
           roseum DSM 5159]
          Length = 165

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
             L   V  + ++  +      +    E+ +       I  L+  ++GI  PT+V+SFP 
Sbjct: 13  EGLDRPVSVRRLARFLRFVAEREGVTGEVGVWICRDDEIAELHERFQGIPGPTDVMSFP- 71

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                       LGDI ++ E   ++   +G      +  L +HGFLHL+GYD + + + 
Sbjct: 72  -------GEPPYLGDIAVSAETAAVQGAEVGHGVGREIAFLTVHGFLHLIGYDDLSEPER 124

Query: 149 CVMEGLERSILEDL 162
             M   +  +L   
Sbjct: 125 SRMLERQEELLHAF 138


>gi|332673960|gb|AEE70777.1| probable metalloprotease [Helicobacter pylori 83]
          Length = 142

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP      +      LG +V+   + +  A  LG   E+ +  L IH
Sbjct: 46  DLRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQTNALKLGHSLEDEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E   ++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESEFIKAFNLP 131


>gi|51598321|ref|YP_072509.1| putative metalloprotease [Borrelia garinii PBi]
 gi|59799021|sp|Q662V4|RRMF_BORGA RecName: Full=Probable rRNA maturation factor
 gi|51572892|gb|AAU06917.1| conserved hypothetical protein [Borrelia garinii PBi]
          Length = 152

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 15/158 (9%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + + DL + VEN  +    HL    + + +  V N +S   F      ELS++  D+  I
Sbjct: 1   MSKSDLNLLVENIKFE---HLSVFHDFILS--VLNTLSISDF------ELSVILCDNVYI 49

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           + LN ++R  ++PT+VLSF     +     G +  + GD+++++E ++  A     E   
Sbjct: 50  QKLNNKFRNKNEPTDVLSFNYNELNEGLVGGINYKIQGDLIISFEYLKFSAQEFNVEIYE 109

Query: 125 HLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILED 161
            L  + IHG LHL+G++H   D     M  L+ ++L  
Sbjct: 110 ELQRVTIHGILHLMGHNHETNDFQKEGMLILQENVLRK 147


>gi|15644257|ref|NP_229309.1| hypothetical protein TM1509 [Thermotoga maritima MSB8]
 gi|6686214|sp|Q9X1J7|RRMF_THEMA RecName: Full=Probable rRNA maturation factor
 gi|4982075|gb|AAD36576.1|AE001799_8 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 150

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +   + +    +   V ++++      I+ LN ++RG D+PT+VL+FP            
Sbjct: 17  LKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTFPLMEED------- 69

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSI 158
           + G+I +   I+E  A      FE  L+ ++IHG LHL GYDH  +DK++  M   ++  
Sbjct: 70  VYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEFEDKNSKEMFEKQKKY 129

Query: 159 LED 161
           +E+
Sbjct: 130 VEE 132


>gi|94985374|ref|YP_604738.1| hypothetical protein Dgeo_1273 [Deinococcus geothermalis DSM 11300]
 gi|145572754|sp|Q1IYW5|RRMF_DEIGD RecName: Full=Probable rRNA maturation factor
 gi|94555655|gb|ABF45569.1| Predicted metal-dependent hydrolase, UPF0054 [Deinococcus
           geothermalis DSM 11300]
          Length = 155

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM 100
           + L S          E+++V      I  L  E+ G D PT+VLSFPT +   D      
Sbjct: 20  AALTSAMRHFGVEDREVTVVLVGDRTIRALKREHWGEDAPTDVLSFPT-WEPGDPFMPPH 78

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           LGDI+++ +    +A   G      +  L  HG  HL+G+DH   +
Sbjct: 79  LGDIIISLDTAGRQAAARGHSLTREVALLASHGLTHLVGHDHPHAE 124


>gi|322378540|ref|ZP_08052988.1| putative metalloprotease [Helicobacter suis HS1]
 gi|322379746|ref|ZP_08054056.1| putative metalloprotease [Helicobacter suis HS5]
 gi|321147817|gb|EFX42407.1| putative metalloprotease [Helicobacter suis HS5]
 gi|321149054|gb|EFX43506.1| putative metalloprotease [Helicobacter suis HS1]
          Length = 157

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + L+  D  ++  LN E+RG+DK T+VLSFP            +LG +V+  E+  IEA 
Sbjct: 46  VELLLVDVEKMRELNLEFRGLDKSTDVLSFPLEIP-----GQKLLGSVVINVELATIEAK 100

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G      +  L +HG LHLLG+DH  +KD       E  ++    + 
Sbjct: 101 QRGHSLFAEITLLFVHGCLHLLGFDH--EKDRGEQREKEEEVIRVFNLP 147


>gi|307637831|gb|ADN80281.1| metal-dependent hydrolase [Helicobacter pylori 908]
          Length = 141

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      +  +N + R  D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSDETMREINRDLRDCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQENAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   E+ +  L IHG LHLLGYDH  DK        E  +++   + 
Sbjct: 85  KLGHSLEDEIALLFIHGVLHLLGYDHEKDKSEQ--RQKEGELIKAFDLP 131


>gi|291277187|ref|YP_003516959.1| hypothetical protein HMU09740 [Helicobacter mustelae 12198]
 gi|290964381|emb|CBG40231.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 151

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 12/136 (8%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
           TL E    + ++  +S           + L+F D + I+ +N EYR  DKPT+VLSFP  
Sbjct: 13  TLLETARLEKIAQTLSPQRM-------IELLFVDENMIQGMNKEYRNQDKPTDVLSFPL- 64

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
              + G +++ LG +V+   I +  A+  G   E  +  L IHG LHL GYDH  + D  
Sbjct: 65  --DAMGIANMPLGSVVICIPIAQGAAHFFGHSLEEEIALLFIHGVLHLQGYDH--EVDLG 120

Query: 150 VMEGLERSILEDLGIN 165
                E+  +E   + 
Sbjct: 121 EHYAAEKQWIEFFSLP 136


>gi|325996428|gb|ADZ51833.1| metal-dependent hydrolase [Helicobacter pylori 2018]
 gi|325998017|gb|ADZ50225.1| putative metalloprotease [Helicobacter pylori 2017]
          Length = 141

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      +  +N + R  D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSDETMREINRDLRDCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQENAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   E+ +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLGHSLEDEIALLFIHGVLHLLGYDH--EKDKGEQRQKEGELIKAFDLP 131


>gi|149369359|ref|ZP_01889211.1| hypothetical protein SCB49_06027 [unidentified eubacterium SCB49]
 gi|149356786|gb|EDM45341.1| hypothetical protein SCB49_06027 [unidentified eubacterium SCB49]
          Length = 138

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 9/139 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
            E           A  +S ++         + E+S +F D   +  LN ++   D  T+V
Sbjct: 6   SETDFNLTDTEKIASWISEIVRNE---AHELGEVSYIFCDDAYLHKLNVQFLDHDTLTDV 62

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +SF       +   + + G+I ++ E +   A      FE+ L  +IIHG LH  GY   
Sbjct: 63  ISF------DNSLGTQVHGEIYISVERVRENAKEFSDSFEDELHRVIIHGLLHFCGYKDK 116

Query: 144 DDKDACVMEGLERSILEDL 162
            D++A +M   E   L  L
Sbjct: 117 TDEEAAMMRSKENEALALL 135


>gi|317009770|gb|ADU80350.1| putative metalloprotease [Helicobacter pylori India7]
          Length = 140

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP             LG +V+   + +  A  LG   E+ +  L IH
Sbjct: 46  DLRGCDYATDVLSFPLEV-----VPHTPLGSVVINAPLAQTNALKLGHRLEDEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|283955287|ref|ZP_06372787.1| hypothetical protein C414_000440025 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793201|gb|EFC31970.1| hypothetical protein C414_000440025 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 136

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 8/125 (6%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM 100
             L S   F+    VEL  +F D+  ++ +N E R  DK T+VLSFP           L 
Sbjct: 9   EFLESIASFLSSKDVEL--IFVDNKEMQEINLEQRKQDKTTDVLSFPLENID----EKLP 62

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LG +V+  ++ + +A  LG  +E  +  L IH  LHLLG+DH  + D   M   E+ ++E
Sbjct: 63  LGSVVINVDLAKEKAKELGHSYEEEVSLLFIHAMLHLLGFDH--EVDNGEMREKEKELIE 120

Query: 161 DLGIN 165
              + 
Sbjct: 121 HFNLP 125


>gi|317504317|ref|ZP_07962304.1| metal dependent hydrolase [Prevotella salivae DSM 15606]
 gi|315664568|gb|EFV04248.1| metal dependent hydrolase [Prevotella salivae DSM 15606]
          Length = 162

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  L + +  + +  + +        + ++  +F D  +I  +N EY G D  T++
Sbjct: 26  DGVSMPKLKKRIINRWIKQVAAT---YGRKVGDIGYMFVDDAKILQVNNEYLGHDYYTDI 82

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F            ++ GD+V++ + ++  A + GKE+E+ L  +IIHG LHL G +  
Sbjct: 83  ITFDYDEDD------IVSGDLVISIDTVKSNAELFGKEYEDELHRVIIHGILHLCGINDK 136

Query: 144 DDKDACVMEGLERSILEDL 162
              +  +ME  E   L  L
Sbjct: 137 GPGEREIMEANENKALAIL 155


>gi|15612152|ref|NP_223804.1| putative metalloprotease [Helicobacter pylori J99]
 gi|11387377|sp|Q9ZK54|RRMF_HELPJ RecName: Full=Probable rRNA maturation factor
 gi|4155684|gb|AAD06669.1| putative [Helicobacter pylori J99]
          Length = 141

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  + +V+ +  +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIADVLASTQI----------------IELVLVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + R  D  T+VLSFP      +      LG +V+   + +  A  LG   E+ +  L IH
Sbjct: 46  DLRDCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKEGELIKAFDLP 131


>gi|145559542|sp|Q9RSN2|RRMF_DEIRA RecName: Full=Probable rRNA maturation factor
          Length = 155

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 8/127 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A       LR       + A+ +   +         E+++V      I  L  E+ G D 
Sbjct: 6   ARKRPPAGLRPALRASLSAAMQHFGGEER-------EVTVVLVGDPEIRALKLEHWGEDA 58

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T+VLSFPT +   D      LGDI+++ +  + +A   G      +  L  HG  HL+G
Sbjct: 59  ATDVLSFPT-WEPGDPFMPPHLGDIIISLDTAQRQAESRGHSLTREVALLASHGLTHLVG 117

Query: 140 YDHVDDK 146
           +DH   +
Sbjct: 118 HDHPHAE 124


>gi|119952863|ref|YP_945072.1| putative metalloprotease [Borrelia turicatae 91E135]
 gi|254799885|sp|A1QYL0|RRMF_BORT9 RecName: Full=Probable rRNA maturation factor
 gi|119861634|gb|AAX17402.1| hypothetical metal-binding protein [Borrelia turicatae 91E135]
          Length = 148

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I  E  LW + +  +           + ++S   F+     ELS++  ++  I+ LN ++
Sbjct: 2   IKEELNLWAEGVEFKHWD-----AYYNFILSVLDFLCIKEYELSVILCNNEYIQKLNSQF 56

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R   +PT+VLSF      S      + GD++++ E +E  +     E  + L    IHG 
Sbjct: 57  RQKSEPTDVLSFNY-LEESGQIDHKIQGDLIISLEYLEFSSLEFNVELYDELQRNTIHGI 115

Query: 135 LHLLGYDHVD-DKDACVMEGLERSILED 161
           LHL+GY H   D     M  ++  +L +
Sbjct: 116 LHLIGYTHKTNDFQNEEMLIIQEKVLRE 143


>gi|315639262|ref|ZP_07894424.1| metalloprotease [Campylobacter upsaliensis JV21]
 gi|315480588|gb|EFU71230.1| metalloprotease [Campylobacter upsaliensis JV21]
          Length = 135

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+F ++  +  LN ++R  +K T+VLSFP    +     +L LG IV+   + + +A
Sbjct: 22  DVELIFVENEEMRELNLKHRNKNKSTDVLSFPLQAIN----EALPLGSIVINKTLAQEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                  ++ +  L IH  LHLLG+DH  +KD   M   E  ++    + 
Sbjct: 78  KEFHHSLKDEISLLFIHAMLHLLGFDH--EKDRGEMRQKEEELIHLFKLP 125


>gi|188527944|ref|YP_001910631.1| putative metalloprotease [Helicobacter pylori Shi470]
 gi|238691942|sp|B2UUR9|RRMF_HELPS RecName: Full=Probable rRNA maturation factor
 gi|188144184|gb|ACD48601.1| putative metalloprotease [Helicobacter pylori Shi470]
          Length = 140

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      +  +N + RG D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSDETMREINRDSRGCDYATDVLSFPL-----EAIPHTPLGSVVINMPLAQESAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   E+ +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLGHRLEDEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKTFNLP 131


>gi|57505296|ref|ZP_00371225.1| conserved hypothetical protein TIGR00043 [Campylobacter upsaliensis
           RM3195]
 gi|57016432|gb|EAL53217.1| conserved hypothetical protein TIGR00043 [Campylobacter upsaliensis
           RM3195]
          Length = 135

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+F ++  +  LN ++R  +K T+VLSFP    +     +L LG IV+   + + +A
Sbjct: 22  DVELIFVENEEMRELNLKHRNKNKSTDVLSFPLQAIN----EALPLGSIVINKTLAQEKA 77

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                  ++ +  L IH  LHLLG+DH  +KD   M   E  ++    + 
Sbjct: 78  KEFHHSLKDEISLLFIHAMLHLLGFDH--EKDKGEMRQKEEELIHLFKLP 125


>gi|317011357|gb|ADU85104.1| putative metalloprotease [Helicobacter pylori SouthAfrica7]
          Length = 140

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV   +  +  +N + R  D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  VELVLVSNETMRGINRDLRNCDYATDVLSFPL-----EAIPHTPLGSVVINVPLAQANAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   E+ +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLGHSLESEIALLFIHGMLHLLGYDH--EKDQGEQRQKESELIKAFNLP 131


>gi|288925424|ref|ZP_06419358.1| metalloprotease [Prevotella buccae D17]
 gi|288337895|gb|EFC76247.1| metalloprotease [Prevotella buccae D17]
          Length = 139

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            D + +  + +   +  +  + +        + E+  +F D  +I  +N EY G D  T+
Sbjct: 6   ADGVKMPNIRKRTVSAWIKAVAAT---FGRKVGEIGYMFVDDEKILEVNNEYLGHDYYTD 62

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +++F      +        GD+V++ + +   A   GK++   L  +IIHG LHL G + 
Sbjct: 63  IITFDYDEGDTIS------GDLVISLDTVRTNAEKFGKDYNEELHRVIIHGILHLCGIND 116

Query: 143 VDDKDACVMEGLERSILEDL 162
               +  +ME  E   L  L
Sbjct: 117 KGPGEREIMEAHENKALALL 136


>gi|157164120|ref|YP_001466415.1| putative metalloprotease [Campylobacter concisus 13826]
 gi|166227306|sp|A7ZCA7|RRMF_CAMC1 RecName: Full=Probable rRNA maturation factor
 gi|112801656|gb|EAT99000.1| putative metalloprotease _0477 [Campylobacter concisus 13826]
          Length = 145

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 12/135 (8%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           LCE  + + +  + S          E+ L+F +   +  LN   RGIDK T+VLSFP   
Sbjct: 3   LCEESYPEILDQICSYLT-----PGEVELLFINKDEMRELNRSERGIDKTTDVLSFPLEL 57

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                     LG IV+  ++++ +A  L    +     L  HG LH+LGYDH  D     
Sbjct: 58  -----VIHAPLGSIVINKDMVKEKAAELNHSEDAETALLFTHGLLHILGYDHEKDD--GQ 110

Query: 151 MEGLERSILEDLGIN 165
           M   E  ++    + 
Sbjct: 111 MREKECEVIAKFNLP 125


>gi|315606861|ref|ZP_07881870.1| possible metal dependent hydrolase [Prevotella buccae ATCC 33574]
 gi|315251526|gb|EFU31506.1| possible metal dependent hydrolase [Prevotella buccae ATCC 33574]
          Length = 139

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            D + +  + +   +  +  + +        + E+  +F D  ++  +N EY G D  T+
Sbjct: 6   ADGVKMPNIRKRTVSAWIKAVAAT---FGRKVGEIGYMFVDDEKMLEVNNEYLGHDYYTD 62

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +++F      +        GD+V++ + +   A   GK++   L  +IIHG LHL G + 
Sbjct: 63  IITFDYDEGDTIS------GDLVISLDTVRTNAEKFGKDYNEELHRVIIHGILHLCGIND 116

Query: 143 VDDKDACVMEGLERSILEDL 162
               +  +ME  E   L  L
Sbjct: 117 KGPGEREIMEAHENKALALL 136


>gi|210135319|ref|YP_002301758.1| putative metalloprotease [Helicobacter pylori P12]
 gi|226701640|sp|B6JN00|RRMF_HELP2 RecName: Full=Probable rRNA maturation factor
 gi|210133287|gb|ACJ08278.1| metalloprotease [Helicobacter pylori P12]
          Length = 140

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + L+      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELILVSGETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP      +      LG +V+   + +  A  LG   EN +  L IH
Sbjct: 46  DLRGCDYATDVLSFPL-----EAIPHTPLGSVVINVPLAQENALKLGHSLENEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKEGELIKAFNLP 131


>gi|126736950|ref|ZP_01752685.1| hypothetical protein RSK20926_10984 [Roseobacter sp. SK209-2-6]
 gi|126721535|gb|EBA18238.1| hypothetical protein RSK20926_10984 [Roseobacter sp. SK209-2-6]
          Length = 169

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 18/171 (10%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I++E+  W ++  L        A A+ +     + ++    E++L+     +I  LN 
Sbjct: 2   LEISIEDPRW-EQADLHAHAAEAIAAALMH-----FDLEPEDCEVALLACGDEKIAELNS 55

Query: 73  EYRGIDKPTNVLSFPTAF------------ASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           E+RG    TNVLS+P                  D    + LGDI +A++    EA    K
Sbjct: 56  EFRGKPVATNVLSWPAEDLAAEEPGGQPLQPEPDFTGEIPLGDIAIAFDTCLREAKAAQK 115

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
              +HL HL++HG LHLLGYDH+ D DA VME LE  IL  +GI+DPYE+D
Sbjct: 116 PLADHLRHLLVHGVLHLLGYDHIRDPDATVMEALEVEILGKMGIDDPYEID 166


>gi|297181414|gb|ADI17603.1| predicted metal-dependent hydrolase [uncultured delta
           proteobacterium HF0130_19C20]
          Length = 157

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS--------DGCSSLMLGDIVLAY 108
           +S++ T+   I+ LN ++   D PT++LS+               +     + G++V++ 
Sbjct: 37  ISVLITNDVEIQKLNKQFLKKDYPTDILSWTYDLEEEKKAGLESKESREENIAGELVVSA 96

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDP 167
           E +  +A   G +FE  L+ L+ HG  HL G+DH + +K    M  LE  +L+D+G+N+ 
Sbjct: 97  ERVSKQAFENGWDFETELIRLLAHGCAHLAGWDHEESEKQERGMLDLEIQLLKDVGLNNI 156

Query: 168 Y 168
           Y
Sbjct: 157 Y 157


>gi|219109735|ref|XP_002176621.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411156|gb|EEC51084.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 192

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 38/180 (21%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
            I VEN      I L  L         + +      +     ++SL+  D   +   N E
Sbjct: 17  DIYVENNQESLNIDLERLK--------ATIAKIRDLMGYRTYDVSLLLVDDQEMRETNEE 68

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLM---------LGDIVLAYEIIEIE---------- 114
            RG+D+PT+VLSFP   A   G  +           +GD+++    +             
Sbjct: 69  TRGMDEPTDVLSFPFTEAIEPGVLTPPVVDIGDYYNMGDMMIDVPYVIRACQDDAKYSHS 128

Query: 115 -----------ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
                      A  +  + E  +  L++HG LHL+GYDH+DD D  +M   E  IL  LG
Sbjct: 129 DLEDEDRGVSAAMAMVMDPEERINMLLVHGMLHLVGYDHIDDDDYQLMVAKEEEILRLLG 188


>gi|28493250|ref|NP_787411.1| hypothetical protein TWT283 [Tropheryma whipplei str. Twist]
 gi|28572638|ref|NP_789418.1| hypothetical protein TW489 [Tropheryma whipplei TW08/27]
 gi|46577441|sp|Q83GJ1|RRMF_TROWT RecName: Full=Probable rRNA maturation factor
 gi|46577442|sp|Q83HN7|RRMF_TROW8 RecName: Full=Probable rRNA maturation factor
 gi|28410770|emb|CAD67156.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
 gi|28476291|gb|AAO44380.1| unknown [Tropheryma whipplei str. Twist]
          Length = 171

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 6/128 (4%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           +++ + + +  F+ +    L + F  +  +  L  ++ G+++ ++VLSFP    +    +
Sbjct: 21  ESLVDFLYRTLFIDKGSY-LGVSFITAAEMRDLKIKHFGVNEDSDVLSFPIDEIAPGSEN 79

Query: 98  SLM---LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
           SL+   LGDIV+  E +  +A      FE+ +  L++HGFLHLLG+DH D      M  L
Sbjct: 80  SLVYGVLGDIVVCPETVMRQAV--RHPFEHEIYLLVVHGFLHLLGFDHSDAPSKKEMFSL 137

Query: 155 ERSILEDL 162
           +  ++ED 
Sbjct: 138 QAKLIEDF 145


>gi|189485340|ref|YP_001956281.1| membrane-associated hydrolase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|254801664|sp|B1GZY8|RRMF_UNCTG RecName: Full=Probable rRNA maturation factor
 gi|170287299|dbj|BAG13820.1| membrane-associated hydrolase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 141

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 9/130 (6%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
            V   K  +  + K   +K    +++ +  D   I  LN +YR I + T+V+SF      
Sbjct: 17  HVPLLKIAAATVLKSEKIKR--YQVNFIMVDDKEIRKLNTKYRKIKRITDVISFLV---- 70

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                   +GDI ++    + +A      ++  L +L+IHG LHL GY   D  +   M 
Sbjct: 71  ---VPEFFMGDIYISKTRSQEQAKEYSNTWQQELAYLVIHGLLHLCGYTDYDAVNKTKMF 127

Query: 153 GLERSILEDL 162
             +  I + L
Sbjct: 128 TKQDKIFKCL 137


>gi|327398193|ref|YP_004339062.1| metalloprotease ybeY [Hippea maritima DSM 10411]
 gi|327180822|gb|AEA33003.1| metalloprotease ybeY [Hippea maritima DSM 10411]
          Length = 144

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 18/153 (11%)

Query: 11  LDLQIAVENAL-WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           ++L + V+    + D+  + +  E +F K+  N          +  EL++V  D   I  
Sbjct: 1   MNLTVIVKKPKEFIDQTTIESFVEFLFKKSGEN----------SEKELNIVLVDDDEITK 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN +++    PTNVLSF        G    +LGDI ++ + IE EA    +  + +L+ +
Sbjct: 51  LNEQFKNRKGPTNVLSF-------YGYDGDILGDIAISSDTIEREALEKKENAKEYLLFI 103

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           I HGFLHL+GY H        M   ++ ++++ 
Sbjct: 104 IAHGFLHLVGYTHETMDKFDEMMKKQKELVDEF 136


>gi|332519443|ref|ZP_08395910.1| protein of unknown function UPF0054 [Lacinutrix algicola 5H-3-7-4]
 gi|332045291|gb|EGI81484.1| protein of unknown function UPF0054 [Lacinutrix algicola 5H-3-7-4]
          Length = 136

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 9/138 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E + +   E   +  +S++I +   ++E   E++ VF D   +  LN E+   D  T+++
Sbjct: 7   ENNFKLPNEAKISTWISSVILQENCIEE---EINYVFCDDEYLHKLNVEFLNHDTLTDII 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF  +          + GDI ++ E +E  A      FE  L  +++HG LH  GY    
Sbjct: 64  SFDYS------VGKNLQGDIFISTERVEDNAKDFNVSFETELQRVLVHGILHYCGYKDKS 117

Query: 145 DKDACVMEGLERSILEDL 162
           D +A +M   E   L  L
Sbjct: 118 DSEAKLMREKENFYLNLL 135


>gi|325284047|ref|YP_004256588.1| metalloprotease ybeY [Deinococcus proteolyticus MRP]
 gi|324315856|gb|ADY26971.1| metalloprotease ybeY [Deinococcus proteolyticus MRP]
          Length = 155

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
           A   S+L +     +    E+++V  D   I+ L  E+ G D  T+VLSFP A+   D  
Sbjct: 16  AALESSLAAVMRHFEVADREVTVVLVDDDTIQALKLEHWGEDAATDVLSFP-AWEPGDPF 74

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
               LGDI+++ +    +A   G      +  L  HG  HL+G+DH   +
Sbjct: 75  MPPHLGDIIISLDTAARQAEARGHSLTREVALLASHGMTHLVGHDHPHAE 124


>gi|317014546|gb|ADU81982.1| metal-binding heat shock protein [Helicobacter pylori Gambia94/24]
          Length = 141

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      +  +N + R  D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSDETMREINRDLRDCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQENAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   E+ +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLGHSLEDEIALLFIHGVLHLLGYDH--EKDKGEQRQKEGELIKAFDLP 131


>gi|254455702|ref|ZP_05069131.1| conserved hypothetical protein TIGR00043 [Candidatus Pelagibacter
           sp. HTCC7211]
 gi|207082704|gb|EDZ60130.1| conserved hypothetical protein TIGR00043 [Candidatus Pelagibacter
           sp. HTCC7211]
          Length = 153

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + +  +   W  +I  +        K    L  K Y      V L+L+ +++  I+ 
Sbjct: 1   MIKIDVLSDERAWSKKIRKKKFFFNNLCK----LFPKKYQYLNKEVSLTLLLSNNKGIKK 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN ++R  +K T++LSFP             LGDI+++Y  +        K F++ ++ +
Sbjct: 57  LNKDFRNKNKSTDILSFPFN-NKIKISKKTYLGDIIISYNFMNKPRTQNLKSFQDKVIKI 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            IHGFLHLL +DH+ +KD   M   E  I + +
Sbjct: 116 FIHGFLHLLNFDHIKNKDYKNMLREENRIYKSI 148


>gi|207091765|ref|ZP_03239552.1| putative metalloprotease [Helicobacter pylori HPKX_438_AG0C1]
          Length = 140

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      I  +N + RG D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSGETIREINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQTNAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   E  +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLGHRLEEEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 131


>gi|254458014|ref|ZP_05071441.1| conserved hypothetical protein TIGR00043 [Campylobacterales
           bacterium GD 1]
 gi|207085407|gb|EDZ62692.1| conserved hypothetical protein TIGR00043 [Campylobacterales
           bacterium GD 1]
          Length = 139

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 7/110 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ L+ T    I+ +N E+R ID PT+VLSFP             LG IV++   +E  +
Sbjct: 28  EIELIITSKDEIKEINKEHRNIDAPTDVLSFPYVE-----MPMSPLGSIVISSAHVEELS 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             LG   ++ L  L IHG LHLLG+DH  + D   M   E  ++++  + 
Sbjct: 83  RELGHTQDDELALLFIHGLLHLLGFDH--EVDTGEMREEEARLIKEFDLP 130


>gi|224142850|ref|XP_002324751.1| predicted protein [Populus trichocarpa]
 gi|222866185|gb|EEF03316.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 23/173 (13%)

Query: 10  RLDLQIAVENALWGD------------------EIHLRTLCEVVFAKAVSNLISKGYFVK 51
            L + I +E  L  D                  ++   +L    F      +   G F  
Sbjct: 94  ELSVSICIEEGLPNDPEILSIAELLRLNVPTAMKLAFDSLKSSTFKTRDETITDVGGF-- 151

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
            + +ELS++  +   I  LN E+R  D  T+VLS        D    LMLGDIV++ E  
Sbjct: 152 -DSIELSVMLCNDEFIRKLNKEWRDEDHATDVLSMSQHVPGLD-LPILMLGDIVISVETA 209

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC-VMEGLERSILEDLG 163
             +A   G    +    L++HG LHL G+DH   ++A   M+  E  +LE LG
Sbjct: 210 ARQAEERGHTLIDETRVLLVHGLLHLFGFDHEISEEAEAEMDKEEGVLLESLG 262


>gi|268315812|ref|YP_003289531.1| hypothetical protein Rmar_0237 [Rhodothermus marinus DSM 4252]
 gi|262333346|gb|ACY47143.1| protein of unknown function UPF0054 [Rhodothermus marinus DSM 4252]
          Length = 146

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 8/136 (5%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L   +  + V  +++     K  +  LSLV TD   +  LN  Y G D  T+VLSFP 
Sbjct: 18  RRLPNALLRRLVQAVLAGE---KARLRYLSLVLTDHATVRELNRTYLGHDYDTDVLSFPL 74

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +         ++ G+I +  +         G  F       ++HG LHLLGYD    +  
Sbjct: 75  SEE-----PGVVEGEIYVDLDTAAERHAEFGATFTQEACRYVVHGLLHLLGYDDATPEAR 129

Query: 149 CVMEGLERSILEDLGI 164
             M  LE   L+  G+
Sbjct: 130 AHMHRLEDRYLQAAGL 145


>gi|317051561|ref|YP_004112677.1| hypothetical protein Selin_1386 [Desulfurispirillum indicum S5]
 gi|316946645|gb|ADU66121.1| protein of unknown function UPF0054 [Desulfurispirillum indicum S5]
          Length = 152

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS---DGCSSLMLGDIVLAYEIIEI 113
           ++++      ++ +N +YR  D  T+VLSF    ++    +     ++GD+ L  ++I  
Sbjct: 38  VNVLLCGREAMQQMNAQYRSRDYATDVLSFQYYESTELSGNTDPDEVIGDMALCLDVIRE 97

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDH-VDDKDACVMEGLERSILEDL 162
            A   G  FE  L  +IIHG LH+ GYDH + ++ A  M+  E  +L+ L
Sbjct: 98  NAVSRGVSFEEELSFMIIHGILHVCGYDHEISEEHAQQMQQQELRLLDLL 147


>gi|88608284|ref|YP_506143.1| hypothetical protein NSE_0249 [Neorickettsia sennetsu str.
           Miyayama]
 gi|123492190|sp|Q2GEF3|RRMF_NEOSM RecName: Full=Probable rRNA maturation factor
 gi|88600453|gb|ABD45921.1| conserved hypothetical protein TIGR00043 [Neorickettsia sennetsu
           str. Miyayama]
          Length = 143

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 12/139 (8%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I + +  W  ++      + +  KA+   +      +    E S+V TD   I TLN 
Sbjct: 2   LEIRITDPRWTKKL---KNLDALLQKALECCL------EGKKAEFSVVLTDDEFIRTLNK 52

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
            YRG D PTNVLSF     +++     ++G+++L+++ + IEA     +FE+HL+H+ IH
Sbjct: 53  SYRGRDTPTNVLSFNY---TNEQIGIGIIGEVILSFDRLVIEALENEIKFEDHLLHMFIH 109

Query: 133 GFLHLLGYDHVDDKDACVM 151
           G LH+LGYDH  D++   M
Sbjct: 110 GVLHVLGYDHSSDRETLAM 128


>gi|288801762|ref|ZP_06407204.1| metalloprotease [Prevotella melaninogenica D18]
 gi|288335804|gb|EFC74237.1| metalloprotease [Prevotella melaninogenica D18]
          Length = 143

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +   ++ +  + +        + E+  +F D  +I  +N EY G D  T++++
Sbjct: 9   VKMPKIKKREISRWIKAVAATH---GRKVGEIGYMFVDDEKILEVNNEYLGHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F            ++ GD+V++ + +   A +  K +E+ L  +IIHG LHL G +    
Sbjct: 66  FDYDEDD------VLNGDLVISLDTVRSNAELFKKSYEDELHRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L  L
Sbjct: 120 GEREIMEENENKALALL 136


>gi|307718663|ref|YP_003874195.1| transcriptional regulator [Spirochaeta thermophila DSM 6192]
 gi|306532388|gb|ADN01922.1| transcriptional regulator [Spirochaeta thermophila DSM 6192]
          Length = 148

 Score =  115 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 8/133 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
            +  + V A  V+ ++ +   V +   ++++V   +  I+ LN  +RG D+PT+VLSFP 
Sbjct: 13  PSPWQEVVASFVARVLEE---VGKESGDIAVVMCSAEFIQELNRTFRGKDEPTDVLSFPN 69

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +        S + GDIV+A E++  +A   G      L+ +I+HG LHL G DH+    +
Sbjct: 70  SEG-----GSRIQGDIVIAPEVVVHQAADWGVPAHEELLRVILHGLLHLSGMDHMSTDPS 124

Query: 149 CVMEGLERSILED 161
             M   +  IL  
Sbjct: 125 EPMLVYQEDILSR 137


>gi|187917939|ref|YP_001883502.1| putative metalloprotease [Borrelia hermsii DAH]
 gi|238689307|sp|B2S1P5|RRMF_BORHD RecName: Full=Probable rRNA maturation factor
 gi|119860787|gb|AAX16582.1| hypothetical metal-binding protein [Borrelia hermsii DAH]
          Length = 148

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I  E  LW + +  +           + ++S   F+     ELS+V  ++  I+ LN  +
Sbjct: 2   IKEELNLWAEGVEFKHWD-----AYYNFILSVLNFLCIEEYELSVVLCNNEYIQKLNSAF 56

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
           R   +PT+VLSF      +   +  + GD++++ E +E  +     E  + L    IHG 
Sbjct: 57  RQKSEPTDVLSFNY-LEENGQINHKIQGDLIISLEYLEFSSLEFNVEMYDELQRNTIHGI 115

Query: 135 LHLLGYDHVD-DKDACVMEGLERSILED 161
           LHL+GY H   D     M  ++  +L +
Sbjct: 116 LHLIGYTHETNDFQNEEMLVIQEKVLRE 143


>gi|254779710|ref|YP_003057816.1| putative metalloprotease [Helicobacter pylori B38]
 gi|254001622|emb|CAX29737.1| Conserved hypothetical protein [Helicobacter pylori B38]
          Length = 140

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + L+      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELILVSDETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP      +      LG +V+   + +  A  LG   E  +  L IH
Sbjct: 46  DLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQTNALKLGHRLEEEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFDLP 131


>gi|304383689|ref|ZP_07366148.1| possible metal dependent hydrolase [Prevotella marshii DSM 16973]
 gi|304335213|gb|EFM01484.1| possible metal dependent hydrolase [Prevotella marshii DSM 16973]
          Length = 140

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 9/138 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            D I +  + +      +  +I+      +   ++  +F + ++I  +N ++   D  T+
Sbjct: 8   SDGIEMPNIRKRDTTAWIRAVINA---YGKRAGDIGYMFVNDNKILEINRQFLQHDYYTD 64

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           V++F       D   + + GDIV++ + +   A + GK +   L  +IIHG LHL G + 
Sbjct: 65  VITF------DDCDGNTINGDIVISLDTVRSNAKLYGKPYGEELHRVIIHGILHLCGLND 118

Query: 143 VDDKDACVMEGLERSILE 160
               +  +ME  E   L 
Sbjct: 119 KGPGERELMEAAEDRALA 136


>gi|57168710|ref|ZP_00367842.1| conserved hypothetical protein TIGR00043 [Campylobacter coli
           RM2228]
 gi|305432662|ref|ZP_07401823.1| probable metalloprotease [Campylobacter coli JV20]
 gi|57019991|gb|EAL56671.1| conserved hypothetical protein TIGR00043 [Campylobacter coli
           RM2228]
 gi|304444373|gb|EFM37025.1| probable metalloprotease [Campylobacter coli JV20]
          Length = 135

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 8/125 (6%)

Query: 41  SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM 100
             L     F+    VEL  VF +S  ++ +N E R  DK T+VLSFP          SL 
Sbjct: 9   EFLEPIASFLSSKDVEL--VFVESKEMQEINLEQRKQDKTTDVLSFPLENID----ESLP 62

Query: 101 LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
           LG +V+  ++ + +A  LG  FE  +  L IH  LHLLG+DH  + D   M   E+ ++E
Sbjct: 63  LGSVVINVDLAKQKAKELGHSFEEEVSLLFIHAMLHLLGFDH--EVDNGEMREKEKELIE 120

Query: 161 DLGIN 165
              + 
Sbjct: 121 HFNLP 125


>gi|261838486|gb|ACX98252.1| hypothetical protein KHP_1056 [Helicobacter pylori 51]
          Length = 142

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 16/143 (11%)

Query: 25  EIHLRTLCEVVFA--KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
           EI  +T  E+ F   + ++N+++           + LV      +  +N + RG D  T+
Sbjct: 3   EIDNQTPLELDFLLLEKIANVLAPTQI-------IELVLVSDGTMREINRDLRGCDYATD 55

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           VLSFP      +  S   LG +V+   + +  A  LG   E+ +  L IHG LHLLGYDH
Sbjct: 56  VLSFPL-----EAISHTPLGSVVINMPLAQTNALKLGHRLEDEIALLFIHGVLHLLGYDH 110

Query: 143 VDDKDACVMEGLERSILEDLGIN 165
             +KD       E  +++   + 
Sbjct: 111 --EKDKGEQRQKESELIKAFNLP 131


>gi|242309876|ref|ZP_04809031.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523877|gb|EEQ63743.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 150

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 9/132 (6%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           + F + +   I +   +     EL  +  D+  I+ LN  +R  D PT+VLSFP      
Sbjct: 20  LEFLEKILEKILRDSNLCNKQCEL--LLVDNPTIQALNCSHRNKDMPTDVLSFPL----- 72

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEG 153
           +   SL+LG IV++ + ++  +  L    E+ +  L IHG LHL+G+DH  D        
Sbjct: 73  ESEFSLLLGSIVISLDFVKSASAKLNHSLEDEIALLFIHGALHLIGFDHEIDN--GEHRT 130

Query: 154 LERSILEDLGIN 165
            E  I+    + 
Sbjct: 131 KEEEIITFFNLP 142


>gi|302344831|ref|YP_003813184.1| translation metalloprotein YbeY [Prevotella melaninogenica ATCC
           25845]
 gi|302149577|gb|ADK95839.1| translation metalloprotein YbeY [Prevotella melaninogenica ATCC
           25845]
          Length = 142

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +   ++ +  + +        + E+  +F D  +I  +N EY G D  T++++
Sbjct: 9   VKMPKIKKREISRWIKAVAATH---GRKVGEIGYMFVDDEKILEVNNEYLGHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F            ++ GD+V++ + +   A +  K +E+ L  +IIHG LHL G +    
Sbjct: 66  FDYDEDD------VLNGDLVISLDTVRSNAELFKKSYEDELNRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L  L
Sbjct: 120 GEREIMEENENKALALL 136


>gi|323343742|ref|ZP_08083969.1| metal dependent hydrolase [Prevotella oralis ATCC 33269]
 gi|323095561|gb|EFZ38135.1| metal dependent hydrolase [Prevotella oralis ATCC 33269]
          Length = 143

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 9/140 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            D + +  + +      +  + +          E+  +F D  +I  +N +Y G D  T+
Sbjct: 6   ADGVSMPKIKKRETTAWIKAVAAT---YGRKAGEIGYMFVDDAKILEVNNQYLGHDYYTD 62

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +++F      +        GD+V++ + +   A    K++E  L  +IIHG LHL G + 
Sbjct: 63  IITFDYNDGDTIN------GDLVISLDTVHSNAEKFNKKYEEELHRVIIHGILHLCGIND 116

Query: 143 VDDKDACVMEGLERSILEDL 162
               +  +ME  E   L  L
Sbjct: 117 KGPGEREIMEANENKALALL 136


>gi|163754568|ref|ZP_02161690.1| glutamyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161325509|gb|EDP96836.1| glutamyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 140

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 9/138 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E       E    + + N+I+          E++ +F D   +  LN E+   D  T+++
Sbjct: 7   ETQFELPNEAQIEQWIGNVIASEN---RKEGEINYIFCDDEYLHKLNVEFLNHDTLTDII 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF       +   + + GDI ++ E +   AN     FE  L  ++IHG LH  GY    
Sbjct: 64  SF------DNSLGNQLHGDIFISVERVADNANDFKVSFEEELRRVMIHGILHYCGYKDKT 117

Query: 145 DKDACVMEGLERSILEDL 162
           D+D   M   E   L+  
Sbjct: 118 DEDQAEMTAKENEKLQMF 135


>gi|84496851|ref|ZP_00995705.1| hypothetical protein JNB_04990 [Janibacter sp. HTCC2649]
 gi|84383619|gb|EAP99500.1| hypothetical protein JNB_04990 [Janibacter sp. HTCC2649]
          Length = 155

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 14/153 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E     DE+ L      V           G        +L L   D   +ETL
Sbjct: 1   MSIDVLNETDFALDELELVACARYVM----------GEMKVHPQADLCLRLVDEAAMETL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++  +  PT+V+SFP       +  D     +LGDIVL   + + +A   G   E  L
Sbjct: 51  HVQWMDLPGPTDVMSFPMDELRPGSDDDDPEEGVLGDIVLCPSVAQKQAAEAGHATEEEL 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + L  HG LHLLGYDH + ++   M  L+R +L
Sbjct: 111 LLLTTHGILHLLGYDHAEPEEEREMFELQRQLL 143


>gi|298373323|ref|ZP_06983312.1| metalloprotease [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274375|gb|EFI15927.1| metalloprotease [Bacteroidetes oral taxon 274 str. F0058]
          Length = 136

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
              ++  +++  I +       IV ++S +F D  +I  +N ++   D  T+V++F    
Sbjct: 11  APKLYRNSITGWIRRVANKYGKIVGDVSFIFCDDIKILEINKQFLNHDYYTDVITFDYTE 70

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
               G      GDI ++ E +E  A      F+N L  ++IHG LHL G +    ++   
Sbjct: 71  GDVIG------GDIFISLETVESNAKEFLTTFDNELKRVMIHGILHLCGQNDKTPEEKQE 124

Query: 151 MEGLERSILE 160
           M   E   L+
Sbjct: 125 MRYKENLALQ 134


>gi|290985008|ref|XP_002675218.1| predicted protein [Naegleria gruberi]
 gi|284088813|gb|EFC42474.1| predicted protein [Naegleria gruberi]
          Length = 231

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 27/141 (19%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD-------------- 94
           F       ++++F  +  I +LN + R    PT++LS+P      D              
Sbjct: 74  FTPHKDYGVTVLFCGNKYITSLNEKDRKKKGPTDILSYPVYSPDLDHNFALMEKDAAFND 133

Query: 95  -------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
                              LGD+V++   I           ++H+  L+ HG LHL+GYD
Sbjct: 134 DLAKLLADEHKILMEEEKFLGDMVISQPYIVDYCKENNISLDHHMALLLTHGILHLMGYD 193

Query: 142 HVDDKDACVMEGLERSILEDL 162
           H  D D  +M+  E  IL  L
Sbjct: 194 HETDSDYAIMKEKEDEILSGL 214


>gi|311031636|ref|ZP_07709726.1| putative metalloprotease [Bacillus sp. m3-13]
          Length = 157

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 39/175 (22%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +++ +  E     DE        ++FA    ++        +   ELS+ F D+ RI+ 
Sbjct: 1   MIEIDMLDETTKLTDEQWDDIRNLLIFAAEKESI--------QPGAELSVTFVDNDRIQE 52

Query: 70  LNFEYRGIDKPTNVLSFPTAFASS-------DGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           +N EYR  D+PT+V+SF              D  +  MLGDI+++    E +A   G   
Sbjct: 53  INREYREKDRPTDVISFAMEELGEGEIEIHYDEEAPRMLGDIIISIPKAEEQAEEYGHSV 112

Query: 123 ENHLVHLIIHGFLHLLG------------YDHVDDKDACVMEGLERSILEDLGIN 165
           +              LG            YDH ++ D  +M   ++ IL+  G+ 
Sbjct: 113 KRE------------LGFLALHGLLHLLGYDHENETDEKIMFDKQKEILDAYGLT 155


>gi|325109207|ref|YP_004270275.1| metalloprotease ybeY [Planctomyces brasiliensis DSM 5305]
 gi|324969475|gb|ADY60253.1| metalloprotease ybeY [Planctomyces brasiliensis DSM 5305]
          Length = 162

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 4/156 (2%)

Query: 16  AVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           AV +  + D+  L T       +  +++++     +    E+ ++  D+  I  +N  + 
Sbjct: 5   AVMDIEFIDQQQLLTFDFSHLQQLAASVLAAHQITQ---AEIHVLLVDNPTIHAMNVAHL 61

Query: 76  GIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFL 135
             D PT+V++FP            +  +IV++ E+    A   G   E      ++H  L
Sbjct: 62  EHDFPTDVITFPLNDTDQQPPDYPLEAEIVISTEMAAEMAGEAGWSAEEEATLYLVHSLL 121

Query: 136 HLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           HL G+D + +     M   E  +L  LG+  P E D
Sbjct: 122 HLCGFDDLTEDAQREMRQRELEMLHHLGMK-PSETD 156


>gi|313203915|ref|YP_004042572.1| hypothetical protein Palpr_1441 [Paludibacter propionicigenes WB4]
 gi|312443231|gb|ADQ79587.1| protein of unknown function UPF0054 [Paludibacter propionicigenes
           WB4]
          Length = 138

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 9/142 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            ++I + ++ +      + N      F  + + E++ +F    RI  +N +Y   D  T+
Sbjct: 6   AEDIKVPSIPKQKINAWIKNT---ATFYGKKVGEIAYIFCSDERILEINKQYLNHDYYTD 62

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +++F  + +S      ++ GDI ++ + ++  A       E  L  ++IHG LHL G   
Sbjct: 63  IITFDYSESS------VISGDIFISIDTVKSNAEEFNVSIEEELKRILIHGILHLCGQAD 116

Query: 143 VDDKDACVMEGLERSILEDLGI 164
              +    M   E   L+   I
Sbjct: 117 NTPELRAEMTNKENLALQTFSI 138


>gi|208435054|ref|YP_002266720.1| hypothetical protein HPG27_1104 [Helicobacter pylori G27]
 gi|226701639|sp|B5Z8F5|RRMF_HELPG RecName: Full=Probable rRNA maturation factor
 gi|208432983|gb|ACI27854.1| hypothetical protein HPG27_1104 [Helicobacter pylori G27]
          Length = 142

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + L+      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELILVSGETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP      +      LG +V+   + +  A  LG   E  +  L IH
Sbjct: 46  DLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQTNALKLGHRLEEEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKIFNLP 131


>gi|315185807|gb|EFU19573.1| protein of unknown function UPF0054 [Spirochaeta thermophila DSM
           6578]
          Length = 148

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 5/112 (4%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE 109
           V +   ++++V      I+ LN  +RG D+PT+VLSFP +        S + GDIV+A E
Sbjct: 31  VGKESGDIAVVMCSPEFIQELNRTFRGKDEPTDVLSFPDSEG-----GSRIQGDIVIAPE 85

Query: 110 IIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           ++  +A   G      L+ +I+HG LHL G DH+    +  M   +  IL  
Sbjct: 86  VVVHQAADWGVPAHEELLRVILHGLLHLSGMDHMSTDPSEPMLVYQEDILSR 137


>gi|325859868|ref|ZP_08172998.1| translation metalloprotein YbeY [Prevotella denticola CRIS 18C-A]
 gi|327312920|ref|YP_004328357.1| translation metalloprotein YbeY [Prevotella denticola F0289]
 gi|325482794|gb|EGC85797.1| translation metalloprotein YbeY [Prevotella denticola CRIS 18C-A]
 gi|326946199|gb|AEA22084.1| translation metalloprotein YbeY [Prevotella denticola F0289]
          Length = 139

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +   ++ +  + +        + E+  +F    +I  +N EY G D  T++++
Sbjct: 9   VKMPRIRKRDTSRWIKAVAAT---YGRKVGEIGYMFVGDEKILEINNEYLGHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F           +++ GD+V++ + +   A +  K +E+ L  +IIHG LHL G +    
Sbjct: 66  FDYDE------GNVLNGDLVISLDTVRSNAELFHKSYEDELNRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   LE L
Sbjct: 120 GEREIMEENENKALELL 136


>gi|332188741|ref|ZP_08390454.1| uncharacterized UPF0054 family protein [Sphingomonas sp. S17]
 gi|332011247|gb|EGI53339.1| uncharacterized UPF0054 family protein [Sphingomonas sp. S17]
          Length = 171

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 80/166 (48%), Gaps = 7/166 (4%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +++ +  E    GDE     +       A+              +E+S+  T    +  
Sbjct: 1   MIEIALIHEEPWSGDEDSWEAIATRAARAAIERTPHGPLLTTPASIEISVRLTSDDEVHA 60

Query: 70  LNFEYRGIDKPTNVLSFPTAFAS-------SDGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           LN +YR  DKPTNVLSFP            +     ++LGDIVLA+ +   EA   G   
Sbjct: 61  LNRQYRQKDKPTNVLSFPMVQPDLIETVTQNSDDGEVLLGDIVLAHGVCIAEAADRGISP 120

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           E H  HL++HG LHLLGYDH+ D +A  ME +ER  L  LGI DPY
Sbjct: 121 ETHATHLLVHGVLHLLGYDHMQDDEAEAMEAIERDALASLGIADPY 166


>gi|255322579|ref|ZP_05363724.1| conserved hypothetical protein [Campylobacter showae RM3277]
 gi|255300487|gb|EET79759.1| conserved hypothetical protein [Campylobacter showae RM3277]
          Length = 152

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           LCE  + + +  +     ++    VELS  F D+  ++ +N   RGI + T+VLSFP   
Sbjct: 17  LCEDDYPRILDQICD---YLTAGEVELS--FVDAEEMKEINVRQRGIYETTDVLSFPLEM 71

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                     LG IV+  E++  +A  LG   ++    L  HG LH+LG+DH  + DA  
Sbjct: 72  H-----LHAPLGCIVINTELVAAKAAELGHSEDDETALLFTHGLLHVLGFDH--ESDAGE 124

Query: 151 MEGLERSILEDLGIN 165
           M   E  ++E   + 
Sbjct: 125 MRAKECEVIEKFSLP 139


>gi|187250487|ref|YP_001874969.1| hydrolase family protein [Elusimicrobium minutum Pei191]
 gi|259645655|sp|B2KAT6|RRMF_ELUMP RecName: Full=Probable rRNA maturation factor
 gi|186970647|gb|ACC97632.1| Hydrolase family protein [Elusimicrobium minutum Pei191]
          Length = 143

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
           +F   VS  + K         E++L+F D   I  +N E+   D  T+V+SF   F    
Sbjct: 20  LFKAGVSAALGK---FASKKGEVNLIFVDGKEIHKINKEFLNHDYKTDVISFNYPFP-QK 75

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGL 154
           G   L  GDI + Y++ +  A++ G+     ++   +HG LHL G D    K+   M+  
Sbjct: 76  GGEGLPFGDIFVCYDVAKENASLYGQGVLKEMLTYAVHGALHLAGMDDATPKERSAMDDE 135

Query: 155 ERSIL 159
              I+
Sbjct: 136 TGRII 140


>gi|295131912|ref|YP_003582588.1| metalloprotease [Zunongwangia profunda SM-A87]
 gi|294979927|gb|ADF50392.1| metalloprotease [Zunongwangia profunda SM-A87]
          Length = 146

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 9/134 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
            E     + + V+ K +  +IS      + + E+S +F D   +  +N  +   D  T++
Sbjct: 12  SENDFDIIEKEVYKKWIERVISSE---GKRLGEISYIFCDDDYLLDINQRFLNHDTYTDI 68

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +SF       D   +L+ GDI ++ E +   A    ++FE  L  +++HG LH  GY   
Sbjct: 69  ISF------DDSIGNLLNGDIYISTERVRENALEFNEDFETELKRVLVHGILHYCGYKDK 122

Query: 144 DDKDACVMEGLERS 157
            D++A +M   E  
Sbjct: 123 SDEEAMLMREKESE 136


>gi|170289192|ref|YP_001739430.1| hypothetical protein TRQ2_1403 [Thermotoga sp. RQ2]
 gi|238688755|sp|B1LBP9|RRMF_THESQ RecName: Full=Probable rRNA maturation factor
 gi|170176695|gb|ACB09747.1| protein of unknown function UPF0054 [Thermotoga sp. RQ2]
          Length = 150

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 8/123 (6%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           +   + +    +   V ++++      I+ LN ++RG D PT+VL+FP            
Sbjct: 17  LKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRGQDLPTDVLTFPLMEED------- 69

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSI 158
           + G+I +   I+E  A      FE  L+ ++IHG LHL GYDH  +D+++  M   ++  
Sbjct: 70  VYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEFEDRNSKEMFEKQKKY 129

Query: 159 LED 161
           +E+
Sbjct: 130 VEE 132


>gi|109947837|ref|YP_665065.1| putative metalloprotease [Helicobacter acinonychis str. Sheeba]
 gi|122973244|sp|Q17WB0|RRMF_HELAH RecName: Full=Probable rRNA maturation factor
 gi|109715058|emb|CAK00066.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 140

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV     ++  +N   R  D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  VELVLVSGEKMREINRNLRNCDYATDVLSFPL-----EAIPHTPLGSVVINMSLAQTNAL 84

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            LG   EN +  L IHG LHLLGYDH  +KD       E  +++   + 
Sbjct: 85  KLGHSLENEIALLFIHGMLHLLGYDH--EKDQGEQRQKESELIKTFNLP 131


>gi|332881691|ref|ZP_08449339.1| translation metalloprotein YbeY [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332680330|gb|EGJ53279.1| translation metalloprotein YbeY [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 141

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + + ++ +      V  + +      + + E++ +F D  +I  +N +Y G D  T++
Sbjct: 7   DGVKMPSIKKRENTAWVKAVAAS---YGKRVGEIAYIFVDDEKILEVNRQYLGHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F            ++ GD+ ++ + +   A  +G  +E  L  +IIHG LHL G +  
Sbjct: 64  ITFDYCEGD------VISGDLFISLDTVRTNAEQVGATYEEELHRVIIHGILHLCGINDK 117

Query: 144 DDKDACVMEGLERSILE 160
              +  +ME  E   L 
Sbjct: 118 GPGEREIMEAAEDKALA 134


>gi|330998027|ref|ZP_08321858.1| translation metalloprotein YbeY [Paraprevotella xylaniphila YIT
           11841]
 gi|329569328|gb|EGG51108.1| translation metalloprotein YbeY [Paraprevotella xylaniphila YIT
           11841]
          Length = 141

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + + ++ +      V  + +      + + E++ +F D  +I  +N +Y G D  T++
Sbjct: 7   DGVKMPSIKKRENTAWVKAVAAS---YGKRVGEIAYIFVDDEKILEVNRQYLGHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F            ++ GD+ ++ + +   A  +G  +E  L  +IIHG LHL G +  
Sbjct: 64  ITFDYCEGD------VISGDLFISLDTVRTNAEQVGATYEEELHRVIIHGILHLCGINDK 117

Query: 144 DDKDACVMEGLERSILE 160
              +  +ME  E   L 
Sbjct: 118 GPGEREIMEAAEDKALA 134


>gi|226355982|ref|YP_002785722.1| metal-dependent hydrolase (metalloprotease) [Deinococcus deserti
           VCD115]
 gi|226317972|gb|ACO45968.1| putative metal-dependent hydrolase (metalloprotease) [Deinococcus
           deserti VCD115]
          Length = 155

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+++V      I  L  E+   D  T+VLSFPT +   D      LGDIV++ +    +A
Sbjct: 35  EVTVVLVGDRAIRALKLEHWDEDAATDVLSFPT-WEPGDPFVPPHLGDIVISLDTARRQA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
           +  G      +  L  HG  HL G+DH   +
Sbjct: 94  DARGHSLTREVALLASHGMTHLTGHDHPHAE 124


>gi|317012939|gb|ADU83547.1| putative metalloprotease [Helicobacter pylori Lithuania75]
          Length = 142

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L+I  +  L  D + L  +  V+    +                + LV      +  +N 
Sbjct: 2   LEIDNQTPLESDFLLLEKIANVLAPTQI----------------IELVLVSGETMREINR 45

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           + RG D  T+VLSFP      +      LG +V+   + +  A  LG   E  +  L IH
Sbjct: 46  DLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQENALKLGHRLEEEIALLFIH 100

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH  +KD       E  +++   + 
Sbjct: 101 GVLHLLGYDH--EKDKGEQRQKESELIKAFDLP 131


>gi|320334941|ref|YP_004171652.1| metalloprotease ybeY [Deinococcus maricopensis DSM 21211]
 gi|319756230|gb|ADV67987.1| metalloprotease ybeY [Deinococcus maricopensis DSM 21211]
          Length = 157

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++++V      I  L  E+ G D  T+VLSFPT F   D      LGDIV++ +    +A
Sbjct: 37  DVTVVLVGDRAIRALKREHWGEDAATDVLSFPT-FVPGDPFVPPHLGDIVISLDTAARQA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
              G      +  L  H   HL+G+DH   +
Sbjct: 96  GARGHSLAREVALLASHAVTHLVGHDHPHAE 126


>gi|332291816|ref|YP_004430425.1| protein of unknown function UPF0054 [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169902|gb|AEE19157.1| protein of unknown function UPF0054 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 135

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             + ++++I      ++ + E++ +F D   +  LN EY   D  T+V+SF         
Sbjct: 18  LLQWLTSVIESE---QKQMGEINYIFCDDAYLHKLNVEYLNHDTLTDVISFDYT------ 68

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
              ++ GD+ ++ E +E  A      F++ L  +++HG LH  GY    D +A  M   E
Sbjct: 69  SGDVISGDVYISVERVEDNAADFKTSFKDELSRVMVHGLLHYCGYKDKSDDEAKEMRAKE 128

Query: 156 RSIL 159
              L
Sbjct: 129 NLYL 132


>gi|240047404|ref|YP_002960792.1| putative metalloprotease mhp224 [Mycoplasma conjunctivae HRC/581]
 gi|239984976|emb|CAT04969.1| Putative metalloprotease mhp224 [Mycoplasma conjunctivae]
          Length = 150

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-SDGCSSLMLGDIVLAYEIIEIEANVLG 119
           F +++ ++ +   Y+  D   +VLSFP    +  +G     +G+I++  E I  +A    
Sbjct: 44  FVEANYMQKMCKTYKNKDYIADVLSFPDFLVNKQNGKKLAFIGEILMCPETIYYQAQSYQ 103

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              +    ++  H   HLL YDH+D+++A +M      I++ + I
Sbjct: 104 HTNKREFCYMFTHSVFHLLNYDHIDEQEAKIMHEKVEKIMQKMEI 148


>gi|281424893|ref|ZP_06255806.1| putative metalloprotease [Prevotella oris F0302]
 gi|299141980|ref|ZP_07035114.1| metalloprotease [Prevotella oris C735]
 gi|281401011|gb|EFB31842.1| putative metalloprotease [Prevotella oris F0302]
 gi|298576442|gb|EFI48314.1| metalloprotease [Prevotella oris C735]
          Length = 142

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 9/139 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  + + +  + +  + +        + ++  +F D  +I  +N +Y G D  T++
Sbjct: 7   DGVGMPKMKKRLINRWIRAVAAT---YGRKVGDIGYMFVDDEKILEVNNDYLGHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F            ++ GD+V++ + +   A   GKE+++ L  +IIHG LHL G +  
Sbjct: 64  ITFDYDEDD------IISGDLVISLDTVRTNAEQFGKEYDDELHRVIIHGILHLCGINDK 117

Query: 144 DDKDACVMEGLERSILEDL 162
              +  +ME  E   L  L
Sbjct: 118 GPGEREIMEANENKALALL 136


>gi|72074176|ref|XP_793533.1| PREDICTED: similar to C21orf57 isoform A protein
           [Strongylocentrotus purpuratus]
 gi|115973189|ref|XP_001180108.1| PREDICTED: similar to C21orf57 isoform A protein
           [Strongylocentrotus purpuratus]
          Length = 182

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 6/142 (4%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           + +        K   +L +    ++    ++S++  +   I  +N  YR  D+PT+VLSF
Sbjct: 7   NFQKSVAFNLDKVKGDLKALRRILRVERFDVSVICVEDKDIRQMNKIYRATDEPTDVLSF 66

Query: 87  PTAFASSDGCSSLM------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           P       G           LGD+ L    IE +      + ++ L  +I HG  HL+GY
Sbjct: 67  PAHENLKPGRLPDPWSDLADLGDMFLGMGYIERDCTKHNADIDDVLPVIITHGLCHLIGY 126

Query: 141 DHVDDKDACVMEGLERSILEDL 162
           DH   +   +M   E  ILE  
Sbjct: 127 DHKTQEQWKMMHDRELQILEQF 148


>gi|222151469|ref|YP_002560625.1| hypothetical protein MCCL_1222 [Macrococcus caseolyticus JCSC5402]
 gi|254799990|sp|B9E6W1|RRMF_MACCJ RecName: Full=Probable rRNA maturation factor
 gi|222120594|dbj|BAH17929.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 154

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 10/151 (6%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +++    D  HL  +  ++   A    I +         E+++ F D + I+ +N  YR 
Sbjct: 7   IDDNAQIDAKHLPEIERLLIFAAEQEGIDEE-------AEVAVSFVDENEIQAINKAYRN 59

Query: 77  IDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
            D  T+V+SF       D        +LGDI++  +    +A   G  FE  L  L +HG
Sbjct: 60  KDAVTDVISFALEEGEDDFEMSDEPRVLGDIIICVKRALEQAEEYGHSFERELGFLSLHG 119

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            LHLLGYDH+++ D   M G +  IL   G+
Sbjct: 120 LLHLLGYDHMNESDEARMFGRQDEILNAFGL 150


>gi|157364821|ref|YP_001471588.1| hypothetical protein Tlet_1970 [Thermotoga lettingae TMO]
 gi|157315425|gb|ABV34524.1| protein of unknown function UPF0054 [Thermotoga lettingae TMO]
          Length = 115

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           ++  +++SLVF    R+  LN EYR ID PT+VL+F     S         G+I +    
Sbjct: 6   EDKNIDVSLVFIGERRMRNLNREYRKIDSPTDVLTFFYEEESF--------GEIFICPSQ 57

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGLERSILED 161
           +E  A+   + +E  L  ++IH  LHL GYDH   D  +  M   +   L +
Sbjct: 58  VEKNASKYSQRYEIELFRVLIHACLHLCGYDHEFVDNKSQEMFHRQEKYLRE 109


>gi|154174537|ref|YP_001407912.1| putative metalloprotease [Campylobacter curvus 525.92]
 gi|112803387|gb|EAU00731.1| conserved hypothetical protein [Campylobacter curvus 525.92]
          Length = 135

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 12/135 (8%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           LCE  + + +  + +   F+    +ELS  F +S  +  +N + RG DK T+VLSFP   
Sbjct: 3   LCEEKYPEILDEICA---FLTPGDIELS--FVNSEEMREINLKERGFDKTTDVLSFPLEL 57

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                     +G IV+  +++  +A  LG   ++    L IHG LH+LG+DH  +KD+  
Sbjct: 58  -----VLHAPIGCIVINTDLVMQKAAQLGHTNDDETALLFIHGLLHVLGFDH--EKDSGQ 110

Query: 151 MEGLERSILEDLGIN 165
           M   E  I+    + 
Sbjct: 111 MREKEVQIITKFKLP 125


>gi|218258573|ref|ZP_03474916.1| hypothetical protein PRABACTJOHN_00571 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225343|gb|EEC97993.1| hypothetical protein PRABACTJOHN_00571 [Parabacteroides johnsonii
           DSM 18315]
          Length = 144

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 9/143 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A + ++I L  + +      V  + +      + + ++S +F    +I  +N +Y   D 
Sbjct: 4   AFYAEDIKLPAIKKRAVGNWVKEVAAT---YGKKVGDISYIFCSDEKILEVNRQYLQHDY 60

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F   + S D  S    GD+ ++ + ++  +      +   L   IIHG LHL G
Sbjct: 61  YTDIITF--DYTSGDKIS----GDLFISLDTVKTNSETFNTSYNEELHRTIIHGILHLCG 114

Query: 140 YDHVDDKDACVMEGLERSILEDL 162
            +     +  +ME  E   L  L
Sbjct: 115 INDKGPGEREIMEANENKALAIL 137


>gi|254442036|ref|ZP_05055512.1| conserved hypothetical protein TIGR00043, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198256344|gb|EDY80652.1| conserved hypothetical protein TIGR00043, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 158

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 7/131 (5%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
              E    K +  L   G F      ELS+ F D   I  L+ ++     PT+V++FP  
Sbjct: 21  RYDESEIEKLIQTLDRAGAF-DAPAGELSIAFVDKDYIAQLHDQFMDDPTPTDVITFPGD 79

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
                       G+I++  ++ +  A      F + L   +IHG+LHL G+D + D D  
Sbjct: 80  PDFDQA------GEIIVCPQVAQEYAQKANLSFSDELGLYLIHGYLHLCGFDDIADSDRA 133

Query: 150 VMEGLERSILE 160
            M   E+  LE
Sbjct: 134 QMRLAEQQALE 144


>gi|303284399|ref|XP_003061490.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456820|gb|EEH54120.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 689

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 24  DEIHLRTLCEVV--FAKAVSNLISKG----------YFVKENIVELSLVFTDSHRIETLN 71
           DEI + TL + V   AK +   I +           Y       ELS+       I  LN
Sbjct: 169 DEIDIATLRDAVRSDAKKLVEWILRPPPGTPLPRDLYSPTTTRAELSVALCGDAYIRALN 228

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
            E+RG D  T+VLSFP           ++ GD+V++ +    +A  +          L+ 
Sbjct: 229 NEWRGKDVATDVLSFPQ----DAFGDFVVFGDVVISVDAARRQAAAMRHSTRREARVLLT 284

Query: 132 HGFLHLLGYDH 142
           HGF+HLLGYDH
Sbjct: 285 HGFVHLLGYDH 295


>gi|94970564|ref|YP_592612.1| hypothetical protein Acid345_3537 [Candidatus Koribacter versatilis
           Ellin345]
 gi|123381297|sp|Q1IKR2|RRMF_ACIBL RecName: Full=Probable rRNA maturation factor
 gi|94552614|gb|ABF42538.1| protein of unknown function UPF0054 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 152

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 9/140 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           I L+     V  +++S  +++         ++ ++ T S  +  LN  +R  DK T+VLS
Sbjct: 2   IILKKKLAGVSEQSLSLFLTRARKAAGVRGQVQVLVTSSDELRGLNRRFRRKDKATDVLS 61

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           FP              GDI ++ +I    A  LG   +  L  LI+HG LHL G+DH  +
Sbjct: 62  FPAIVDGEA-------GDIAISSDIASEYAYELGHSLDEELRILILHGVLHLAGHDH--E 112

Query: 146 KDACVMEGLERSILEDLGIN 165
           +D   ME LE  + + L + 
Sbjct: 113 RDKGEMEALESELRDKLKLP 132


>gi|288800393|ref|ZP_06405851.1| metalloprotease [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332606|gb|EFC71086.1| metalloprotease [Prevotella sp. oral taxon 299 str. F0039]
          Length = 138

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 9/138 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            +++ +  + +      +  +        + + ++  +F D  +I  +N EY   D  T+
Sbjct: 6   SEKVKMPKIKKRETTAWIKQV---AQSYGKKVGDIGYMFVDDEKILEVNREYLQHDYYTD 62

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +++F             + GD+V++ + +   A + GK +E  L  +IIHG LHL+G + 
Sbjct: 63  IITFDYCENDE------LNGDLVISLDTVRTNAELFGKTYEEELYRVIIHGVLHLIGIND 116

Query: 143 VDDKDACVMEGLERSILE 160
               +  +ME  E   L 
Sbjct: 117 KGPGEREIMEAAENKALA 134


>gi|298207257|ref|YP_003715436.1| hypothetical protein CA2559_03360 [Croceibacter atlanticus
           HTCC2559]
 gi|83849893|gb|EAP87761.1| hypothetical protein CA2559_03360 [Croceibacter atlanticus
           HTCC2559]
          Length = 138

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 9/132 (6%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           + E  F   + ++I+      +N+ E++ +F D   + ++N +Y   D  T+++SF T+ 
Sbjct: 12  INEDEFNSWLLSVIASE---GKNLGEINYIFCDDAYLLSINQQYLDHDTYTDIISFDTSE 68

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
            +       + GDI ++ E I+  A       ++ L  +++HG LH  GY    D +A +
Sbjct: 69  GND------LSGDIFISVERIQENAQQFNVSVDDELKRVLVHGILHFCGYKDKTDDEAKL 122

Query: 151 MEGLERSILEDL 162
           M   E   L+  
Sbjct: 123 MREKEDEKLKMF 134


>gi|283780308|ref|YP_003371063.1| hypothetical protein Psta_2534 [Pirellula staleyi DSM 6068]
 gi|283438761|gb|ADB17203.1| protein of unknown function UPF0054 [Pirellula staleyi DSM 6068]
          Length = 143

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 8/136 (5%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA 89
            + + + + AV  +++ G        E+S+   D   +  LN +Y   D  T+ LSF   
Sbjct: 14  KIDKKLLSSAVRKVLALGEI---KSAEISVAVVDGDEMHQLNRQYLQHDYTTDCLSFVLD 70

Query: 90  FASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
           F         + G+++++ +    E+   G   E+ L+  +IH  LHL+G+D  ++ D  
Sbjct: 71  FEDDH-----LEGEVIVSADYAAQESLQYGWRMEDELLLYVIHASLHLIGHDDHEESDIA 125

Query: 150 VMEGLERSILEDLGIN 165
            M   E+ IL   G+ 
Sbjct: 126 KMREAEKQILAQFGLE 141


>gi|325268276|ref|ZP_08134909.1| metal dependent hydrolase [Prevotella multiformis DSM 16608]
 gi|324989418|gb|EGC21368.1| metal dependent hydrolase [Prevotella multiformis DSM 16608]
          Length = 139

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +   ++ +  + +        I E+  +F    +I  +N EY G D  T++++
Sbjct: 9   VKMPKIRKRDTSRWIKAVAAT---YGREIGEIGYMFVGDEKILEINNEYLGHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F           +++ GD+V++ + +   A +  K +E+ L  +IIHG LHL G +    
Sbjct: 66  FDYDE------GNVLNGDLVISLDTVRSNAELFHKSYEDELNRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L  L
Sbjct: 120 GEREIMEENENKALALL 136


>gi|154494262|ref|ZP_02033582.1| hypothetical protein PARMER_03613 [Parabacteroides merdae ATCC
           43184]
 gi|154085946|gb|EDN84991.1| hypothetical protein PARMER_03613 [Parabacteroides merdae ATCC
           43184]
          Length = 148

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 9/143 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A + ++  L  + +      V  + +      + + ++S +F    +I  +N +Y   D 
Sbjct: 4   AFYAEDTKLPAIKKRAVGNWVKEVAAT---YGKKVGDISYIFCSDEKILEVNRQYLQHDY 60

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F   + S D  S    GD+ ++ + ++  +      +   L   IIHG LHL G
Sbjct: 61  YTDIITF--DYTSGDKIS----GDLFISLDTVKTNSEAFNTPYNEELHRTIIHGILHLCG 114

Query: 140 YDHVDDKDACVMEGLERSILEDL 162
            +     +  +ME  E   L  L
Sbjct: 115 INDKGPGERELMEANENKALAIL 137


>gi|209527916|ref|ZP_03276403.1| protein of unknown function UPF0054 [Arthrospira maxima CS-328]
 gi|209491636|gb|EDZ92004.1| protein of unknown function UPF0054 [Arthrospira maxima CS-328]
          Length = 152

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 17/142 (11%)

Query: 10  RLDLQIAVENALW----GDEIHLRTLCEVVFA-----KAVSNLISK--GYFVKENIVELS 58
           ++ L++ +E+  W    G+ + L  L E   A           + +   Y       ELS
Sbjct: 7   KVQLEVNIEDNFWWGKEGESLRLGELAEKAIAPETWESWFCQWLQQLDPYLPPAKGYELS 66

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF------ASSDGCSSLMLGDIVLAYEIIE 112
           L  TD   I+  N +YR +D+ T+VLSF          A         LGDI+++ E   
Sbjct: 67  LRLTDDREIQEFNAQYRQLDEATDVLSFAALETSLVMPAEHLSLHPCYLGDIIISVETAF 126

Query: 113 IEANVLGKEFENHLVHLIIHGF 134
            +A   G      L  L  HG 
Sbjct: 127 RQAQQAGHNLTTELAWLTSHGL 148


>gi|328953968|ref|YP_004371302.1| metalloprotease ybeY [Desulfobacca acetoxidans DSM 11109]
 gi|328454292|gb|AEB10121.1| metalloprotease ybeY [Desulfobacca acetoxidans DSM 11109]
          Length = 128

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 1/109 (0%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELSL F +   +  LN         TNV++ P            +LGD++++ E  + +
Sbjct: 6   AELSLTFVNDPAMARLNRTIMQRRGTTNVIALPQQGGPFPEVQPQILGDVIISLETTQRQ 65

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV-MEGLERSILEDL 162
           A   G EF       +IHG LHLLGYDH   + A   M    + +   L
Sbjct: 66  AWQQGWEFAELFDLYLIHGILHLLGYDHETSEAAAQCMAVKTKELFLRL 114


>gi|78187213|ref|YP_375256.1| hypothetical protein Plut_1354 [Chlorobium luteolum DSM 273]
 gi|123582883|sp|Q3B368|RRMF_PELLD RecName: Full=Probable rRNA maturation factor
 gi|78167115|gb|ABB24213.1| Protein of unknown function UPF0054 [Chlorobium luteolum DSM 273]
          Length = 137

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 9/134 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L + +  +AV  +I        + +E++ V+  S     +N EY   D PT+ +SFP 
Sbjct: 11  RKLDDALLCRAVETVIQGE---GRHALEIAAVYCGSRMSRRINREYLQHDWPTDTISFPY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                 G    + G+  +  ++IE  A     +FE  L  + IH  LHL GYD    +D 
Sbjct: 68  ------GSGGNVEGEFYICLDVIEENARRFNTDFERELFRVTIHSVLHLAGYDDHLPEDR 121

Query: 149 CVMEGLERSILEDL 162
             M   E S L+ L
Sbjct: 122 RRMTEREDSYLQQL 135


>gi|262383157|ref|ZP_06076294.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296035|gb|EEY83966.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 143

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A + ++I L  + +   +  V  +        +   ++S +F    +I  +N +Y   D 
Sbjct: 4   AYYAEDIELPAIKKRAVSGWVKAV---AETYGKKTGDISYIFCSDEKILEVNRQYLQHDY 60

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F     +         GD+ ++ + +   A     ++   L   IIHG LHL G
Sbjct: 61  YTDIITFDYTEGNKIS------GDLFISLDTVRTNAETFHTDYNEELHRTIIHGILHLCG 114

Query: 140 YDHVDDKDACVMEGLERSILEDL 162
            +     +  +ME  E   L  L
Sbjct: 115 INDKGPGEREIMEENENRALAIL 137


>gi|194246695|ref|YP_002004334.1| hypothetical protein ATP_00301 [Candidatus Phytoplasma mali]
 gi|254801600|sp|B3QZV1|RRMF_PHYMT RecName: Full=Probable rRNA maturation factor
 gi|193807052|emb|CAP18488.1| conserved hypothetical protein [Candidatus Phytoplasma mali]
          Length = 148

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 6/128 (4%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           K ++ ++ K +F       + ++F    +++ +NF YR  D  T+VLSF       +   
Sbjct: 14  KYLTKILKKIFFFVPERQNIHIIFITPLKMKKMNFYYRQKDYDTDVLSF------INEID 67

Query: 98  SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
              LGDI +  +  + ++          +  L  HG+LHL GY+H    +   M  ++  
Sbjct: 68  KDSLGDIFINLKKAQKQSQNYNHSLSREVCFLATHGYLHLKGYEHHSKDELKKMLIIQEK 127

Query: 158 ILEDLGIN 165
           +L+ + ++
Sbjct: 128 MLKKVDLD 135


>gi|32473188|ref|NP_866182.1| hypothetical protein RB4579 [Rhodopirellula baltica SH 1]
 gi|46577385|sp|Q7USC9|RRMF_RHOBA RecName: Full=Probable rRNA maturation factor
 gi|32397867|emb|CAD73868.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 194

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 7/160 (4%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
            + ++     D        E    +     I+       +   + +   D   I  +N E
Sbjct: 12  DVLIDEEAEPDLSIWFGCLETARTELAQAAIAAAAVEGCDRGSVGVRICDDATIHPINRE 71

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV--LGKEFENHLVHLII 131
           +   D PT+V+SFP           ++ G++V ++E     A+           L+  ++
Sbjct: 72  FLQHDYPTDVISFPYELE-----PPMVEGELVASFETAIENASEPSNPLSPREELLLYVV 126

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           HG LH++G+D    +    M   E + ++ +GI  P   D
Sbjct: 127 HGTLHIVGHDDQSPEPRAAMRRAEIAAMKLIGIELPLSND 166


>gi|260591891|ref|ZP_05857349.1| putative metalloprotease [Prevotella veroralis F0319]
 gi|260536175|gb|EEX18792.1| putative metalloprotease [Prevotella veroralis F0319]
          Length = 143

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +   ++ +  + +        + E+  +F D  +I  +N EY G D  T++++
Sbjct: 9   VKMPKIRKRDTSRWIKAVAAT---YGRKVGEIGYMFVDDEKILEVNNEYLGHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F            ++ GD+V++ + +   A + GK +E  L  +IIHG LHL G +    
Sbjct: 66  FDYDEGD------VLNGDLVISLDTVRSNAELFGKLYEEELFRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L  L
Sbjct: 120 GEREIMEENENKALALL 136


>gi|150024116|ref|YP_001294942.1| hypothetical protein FP0002 [Flavobacterium psychrophilum JIP02/86]
 gi|172048599|sp|A6GVJ9|RRMF_FLAPJ RecName: Full=Probable rRNA maturation factor
 gi|149770657|emb|CAL42121.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 140

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 9/136 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           EI      E  +   VS++I       ++  E++ +F D + +  +N +Y   D  T+V+
Sbjct: 7   EIDFEIREETSYINWVSSVILSEN---KSEGEINYIFCDDNYLLEINQQYLNHDTLTDVI 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF  +          + GDI ++ E +   A+     FE  L  ++IHG LH  GY    
Sbjct: 64  SFDYSLGDE------IHGDIYISIERVRENADDFKVPFEEELKRVMIHGVLHYCGYKDKS 117

Query: 145 DKDACVMEGLERSILE 160
           D D  +M   E   L+
Sbjct: 118 DADELLMRSKEDEKLK 133


>gi|327538122|gb|EGF24808.1| protein belonging to uncharacterized protein family UPF0054
           [Rhodopirellula baltica WH47]
          Length = 193

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 7/160 (4%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
            + ++     D        E    +     I+     + +   + +   D   I  +N E
Sbjct: 11  DVLIDEEAEPDLSIWFGCLETARTELAQAAIAAASVEECDRGSVGVRICDDATIHPINRE 70

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV--LGKEFENHLVHLII 131
           +   D PT+V+SFP           ++ G++V ++E     A+           L+  ++
Sbjct: 71  FLQHDYPTDVISFPYELE-----PPMVEGELVASFETAIENASEPSNPLSPREELLLYVV 125

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           HG LH++G+D    +    M   E + ++ +GI  P   D
Sbjct: 126 HGTLHIVGHDDQSPEPRAAMRRAEIAAMKLIGIELPLSND 165


>gi|224536891|ref|ZP_03677430.1| hypothetical protein BACCELL_01767 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521479|gb|EEF90584.1| hypothetical protein BACCELL_01767 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 136

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 9/137 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  + +    + +  + +     K+ + E++ +F    +I  +N +Y   D  T++
Sbjct: 7   DGVEMPAIKKSQTTEWIKAVAAT---YKKRVGEIAYIFCSDEKILEVNRQYLQHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F           + + GD+ ++ + +   A   G ++E  L  +IIHG LHL G +  
Sbjct: 64  ITFDYCE------GNRLSGDLFISLDTVRTNAEQFGSDYETELHRVIIHGILHLCGINDK 117

Query: 144 DDKDACVMEGLERSILE 160
              +  +ME  E   L 
Sbjct: 118 GPGEREIMEAAENKALA 134


>gi|224437000|ref|ZP_03657981.1| putative metalloprotease [Helicobacter cinaedi CCUG 18818]
 gi|313143472|ref|ZP_07805665.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313128503|gb|EFR46120.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 202

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 35/180 (19%)

Query: 7   NLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
            +P+L++    E++ + +E+      E +  +  +  + KG F       L +VF DS  
Sbjct: 10  PMPQLEID---ESSPYKNEL------EKLLLEIGNLGLIKGDFSH---CSLEVVFVDSKT 57

Query: 67  IETLNFEYRGIDKPTNVLSFPTA-------FASSDGCS--------------SLMLGDIV 105
           +  +N  +RG    T+VLSFP         FA  D                   +LG IV
Sbjct: 58  MREINRTHRGKLSTTDVLSFPLECDFMACDFAEGDFMESDFDFSPLDSTAPFERLLGSIV 117

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +  E+ +  +        + +  L IHGFLH+LG+DH  D        LE+ I+E +G+ 
Sbjct: 118 INTELAKAMSESYNHTLIDEISLLFIHGFLHILGFDHEVDNGEQ--RALEQCIIESIGLK 175


>gi|158520794|ref|YP_001528664.1| hypothetical protein Dole_0777 [Desulfococcus oleovorans Hxd3]
 gi|158509620|gb|ABW66587.1| protein of unknown function UPF0054 [Desulfococcus oleovorans Hxd3]
          Length = 97

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           +N  Y G   PTNV++FP    +    +  +LGD+V++ +    EA  +G   E     L
Sbjct: 1   MNQVYLGRTGPTNVIAFPMQEGAFADLTPGLLGDVVISADTALREARSMGVSLEARFTEL 60

Query: 130 IIHGFLHLLGYDHV-DDKDACVMEGLERSILEDL 162
           +IHG LHL GYDH   D +A  ME   R +L+ L
Sbjct: 61  LIHGILHLSGYDHEQSDTEAEKMEAKTRELLKML 94


>gi|301311742|ref|ZP_07217667.1| putative metalloprotease [Bacteroides sp. 20_3]
 gi|300830302|gb|EFK60947.1| putative metalloprotease [Bacteroides sp. 20_3]
          Length = 143

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A + ++I L  + +   +  V  +        +   ++S +F    +I  +N +Y   D 
Sbjct: 4   AYYAEDIELPAIKKRAVSGWVKAV---AETYGKKTGDISYIFCSDEKILEVNRQYLQHDY 60

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F     +         GD+ ++ + +   A     ++   L   IIHG LHL G
Sbjct: 61  YTDIITFDYTEGNKIS------GDLFISLDTVRTNAETFHTDYNEELHRTIIHGILHLCG 114

Query: 140 YDHVDDKDACVMEGLERSILEDL 162
            +     +  +ME  E   L  L
Sbjct: 115 INDKGPGEREIMEENENRALAIL 137


>gi|313886905|ref|ZP_07820608.1| translation metalloprotein YbeY [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923602|gb|EFR34408.1| translation metalloprotein YbeY [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 175

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 2/107 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++  +TD   I   N  +   D  T+V++FP    S       + GDI+++ + +   A
Sbjct: 38  EINFQYTDDEGILRANRAFLQHDYYTDVITFPRE--SEQEGDDAIYGDILISIDTVATNA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             LG  F+  L  ++IHG LHLLG D   D +  +M   E   L  L
Sbjct: 96  QELGVPFQQELYRVMIHGILHLLGIDDQTDSERELMHMAEDRALMQL 142


>gi|332561271|ref|ZP_08415589.1| hypothetical protein RSWS8N_19539 [Rhodobacter sphaeroides WS8N]
 gi|332275069|gb|EGJ20385.1| hypothetical protein RSWS8N_19539 [Rhodobacter sphaeroides WS8N]
          Length = 160

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 19/165 (11%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E+  W +E+ L  L        ++ L             L ++  D  RI  LN  +R 
Sbjct: 2   IEDGRW-EELDLPALATRAAEATLAALDMPAEGFT-----LVVMGCDDARIAELNGAFRQ 55

Query: 77  IDKPTNVLSFPTAFASSDGCS-------------SLMLGDIVLAYEIIEIEANVLGKEFE 123
             KPTNVLS+P+   +S+                   LGD+ +A+E  + EA   GK   
Sbjct: 56  KGKPTNVLSWPSEERASEEPGVAPEPPEPGDPDDPEPLGDVAIAFETCQREAAEQGKPVT 115

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +H+ HL++HG LHLLGYDHV++ D  +ME  E  IL  LG+ DPY
Sbjct: 116 DHVTHLLVHGVLHLLGYDHVEEADGDLMEATETRILAGLGVPDPY 160


>gi|150009548|ref|YP_001304291.1| hypothetical protein BDI_2961 [Parabacteroides distasonis ATCC
           8503]
 gi|255013159|ref|ZP_05285285.1| hypothetical protein B2_04585 [Bacteroides sp. 2_1_7]
 gi|166228935|sp|A6LG55|RRMF_PARD8 RecName: Full=Probable rRNA maturation factor
 gi|149937972|gb|ABR44669.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 142

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 9/143 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A + ++I L  + +   +  +  +        +   ++S +F    +I  +N +Y   D 
Sbjct: 4   AYYAEDIQLPAIKKKAVSGWIKAV---AETYGKKTGDISYIFCSDEKILEVNRQYLQHDY 60

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F     +         GD+ ++ + +   A     ++   L   IIHG LHL G
Sbjct: 61  YTDIITFDYTEGNKIS------GDLFISLDTVRTNAETFHTDYNEELHRTIIHGILHLCG 114

Query: 140 YDHVDDKDACVMEGLERSILEDL 162
            +     +  +ME  E   L  L
Sbjct: 115 INDKGPGEREIMEENENRALAIL 137


>gi|282858743|ref|ZP_06267896.1| metalloprotein, YbeY/ UPF0054 family [Prevotella bivia JCVIHMP010]
 gi|282588492|gb|EFB93644.1| metalloprotein, YbeY/ UPF0054 family [Prevotella bivia JCVIHMP010]
          Length = 144

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 9/132 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + + + +K +  +     F      ++  +F D  +I  +N EY G D  T++++
Sbjct: 9   VKMPKIKKRLISKWIKAVAKSHGF---KTGDIGYMFVDDEKILEVNNEYLGHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F      +        GD+V++ + +   A +  K +E+ L  +IIHG LHL G +    
Sbjct: 66  FDYDEDDTIS------GDLVISLDTVRTNAELFHKTYEDELERVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERS 157
            +  +ME  E  
Sbjct: 120 GEREIMEDNENK 131


>gi|298373953|ref|ZP_06983911.1| metalloprotease [Bacteroides sp. 3_1_19]
 gi|298268321|gb|EFI09976.1| metalloprotease [Bacteroides sp. 3_1_19]
          Length = 142

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 9/143 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A + ++I L  + +   +  +  +        +   ++S +F    +I  +N +Y   D 
Sbjct: 4   AYYAEDIQLPAIKKKAVSGWIKAV---AETYGKKTGDISYIFCSDEKILEVNRQYLQHDY 60

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F     +         GD+ ++ + +   A     ++   L   IIHG LHL G
Sbjct: 61  YTDIITFDYTEGNKIS------GDLFISLDTVRTNAETFHTDYNEELHRTIIHGILHLCG 114

Query: 140 YDHVDDKDACVMEGLERSILEDL 162
            +     +  +ME  E   L  L
Sbjct: 115 INDKGPGEREIMEENENRALAIL 137


>gi|221369606|ref|YP_002520702.1| metalloprotease RHOS4_36330 [Rhodobacter sphaeroides KD131]
 gi|221162658|gb|ACM03629.1| metalloprotease RHOS4_36330 [Rhodobacter sphaeroides KD131]
          Length = 160

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 19/165 (11%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           +E+  W +E+ L  L        ++ L             L ++  D  RI  LN  +R 
Sbjct: 2   IEDGRW-EELDLPALATRAAEATLAALDIPAEGFT-----LVVMGCDDARIAELNGAFRQ 55

Query: 77  IDKPTNVLSFPTAFASSDGCS-------------SLMLGDIVLAYEIIEIEANVLGKEFE 123
             KPTNVLS+P+   +S+                   LGD+ +A+E  + EA   GK   
Sbjct: 56  KGKPTNVLSWPSEERASEEPGVAPEPPEPGDPEDPEPLGDVAIAFETCQREAAEQGKPVA 115

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           +H+ HL++HG LHLLGYDHV++ D  +ME  E  IL  LG+ DPY
Sbjct: 116 DHVTHLLVHGVLHLLGYDHVEEADGDLMEATETRILAGLGVPDPY 160


>gi|160882931|ref|ZP_02063934.1| hypothetical protein BACOVA_00893 [Bacteroides ovatus ATCC 8483]
 gi|260172638|ref|ZP_05759050.1| hypothetical protein BacD2_12296 [Bacteroides sp. D2]
 gi|315920928|ref|ZP_07917168.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156111614|gb|EDO13359.1| hypothetical protein BACOVA_00893 [Bacteroides ovatus ATCC 8483]
 gi|313694803|gb|EFS31638.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 138

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E++ +F    +I  +N +Y   D  T++++F             + GD+ ++ + I
Sbjct: 33  KRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIITFDYCEGD------RLSGDLFISLDTI 86

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              A   G  +E+ L  +IIHG LHL G +     +  VME  E   L  L
Sbjct: 87  RTNAEQFGASYEDELHRVIIHGILHLCGINDKGPGEREVMEAAENKALGML 137


>gi|332300776|ref|YP_004442697.1| metalloprotease ybeY [Porphyromonas asaccharolytica DSM 20707]
 gi|332177839|gb|AEE13529.1| metalloprotease ybeY [Porphyromonas asaccharolytica DSM 20707]
          Length = 175

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 2/107 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++  +TD   I   N  +   D  T+V++FP    S      ++ GDI+++ + +   A
Sbjct: 38  EINFQYTDDEGILRANRAFLQHDYYTDVITFPRE--SEQEGDDVIYGDILISIDTVATNA 95

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             LG  F+  L  ++IHG LHLLG D   D +  +M   E   L  L
Sbjct: 96  QELGVPFQQELYRVMIHGILHLLGIDDQTDSERELMHMAEDRALMQL 142


>gi|256838280|ref|ZP_05543790.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739199|gb|EEU52523.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 142

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 9/143 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A + ++I L  + +   +  V  +        +   ++S +F    +I  +N +Y   D 
Sbjct: 4   AYYAEDIELPAIKKRAVSGWVKAV---AETYGKKTGDISYIFCSDEKILEVNRQYLQHDY 60

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F     +         GD+ ++ + +   A     ++   L   IIHG LHL G
Sbjct: 61  YTDIITFDYTEGNKIS------GDLFISLDTVRTNAETFHTDYNEELHRTIIHGILHLCG 114

Query: 140 YDHVDDKDACVMEGLERSILEDL 162
            +     +  +ME  E   L  L
Sbjct: 115 INDKGPGEREIMEENENRALAIL 137


>gi|213161076|ref|ZP_03346786.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 78

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 47/73 (64%)

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSI 158
            +LGD+++  +++E EA    K  E H  H+++HG LHLLGYDH+DD +A  ME LE  I
Sbjct: 2   PLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEI 61

Query: 159 LEDLGINDPYEVD 171
           +  +G  DPY  +
Sbjct: 62  MLAMGYEDPYIAE 74


>gi|88855036|ref|ZP_01129701.1| hypothetical protein A20C1_04121 [marine actinobacterium PHSC20C1]
 gi|88815564|gb|EAR25421.1| hypothetical protein A20C1_04121 [marine actinobacterium PHSC20C1]
          Length = 153

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 16/159 (10%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E+A+  DE   + LC     +                 EL +VF D   +E L
Sbjct: 1   MSIEINNESAVEVDEHAFQRLCTFALDQ----------LHVHPDAELGIVFVDEAAMEQL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++     PT+VLSFP              + +LGDIV+  ++   +A   G      +
Sbjct: 51  HVQWMDEPGPTDVLSFPMDELRPGTEDRQTPAGLLGDIVVCPQVAISQAETAGHPPLEEM 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           + L  HG LHLLG+DH + ++   M GL+R IL  LG  
Sbjct: 111 LLLTTHGLLHLLGFDHAEPEEEKEMFGLQREIL--LGFA 147


>gi|317152962|ref|YP_004121010.1| hypothetical protein Daes_1250 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943213|gb|ADU62264.1| protein of unknown function UPF0054 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 162

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 21/151 (13%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           D++I  E  L  D    R     V    + +L  +G         L L   D   I  LN
Sbjct: 4   DIRILRETRLEPDFPLSRQELVRVVETILDSLGLEG-------AALELTLVDDREIARLN 56

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSS--------------LMLGDIVLAYEIIEIEANV 117
            E+ G   PTN+LSFP    S                      LG++ L+ + +  EA++
Sbjct: 57  REFMGCPGPTNILSFPAFERSGPDSGPDVDPDSGPDSGTMAEYLGELALSVDTLAREAHL 116

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            G+    HL  L+ HG LHL G+DH ++ DA
Sbjct: 117 YGQPPRVHLARLLAHGILHLAGHDHGEEMDA 147


>gi|224023519|ref|ZP_03641885.1| hypothetical protein BACCOPRO_00221 [Bacteroides coprophilus DSM
           18228]
 gi|224016741|gb|EEF74753.1| hypothetical protein BACCOPRO_00221 [Bacteroides coprophilus DSM
           18228]
          Length = 140

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 58/137 (42%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +   +  +  +        + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 9   VDMPAIKKRETSAWIKAV---AETYGKKVGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F     +         GD+ ++ + +   A   G  +E  L  +IIHG LHL G +    
Sbjct: 66  FDYCEGNRIS------GDLFISLDTVRTNAEQFGATYETELHRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L+ L
Sbjct: 120 GEREIMEAAENRALDML 136


>gi|258648907|ref|ZP_05736376.1| putative metalloprotease [Prevotella tannerae ATCC 51259]
 gi|260850939|gb|EEX70808.1| putative metalloprotease [Prevotella tannerae ATCC 51259]
          Length = 139

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 6/109 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E++ +F D  +I  +N +Y   D  T++++F           +++ GD+ ++ + +
Sbjct: 32  KEVGEIAYIFCDDEKILEVNQQYLNHDYYTDIITFDYTE------GNVLSGDLFISLDTV 85

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
              A      +   L  +IIHG LHL G +     +  +ME  E   L 
Sbjct: 86  RTNAEQRQISYREELDRVIIHGILHLCGINDKGPGERQLMEAAENKALN 134


>gi|77465599|ref|YP_355102.1| hypothetical protein RSP_3598 [Rhodobacter sphaeroides 2.4.1]
 gi|126464038|ref|YP_001045151.1| hypothetical protein Rsph17029_3283 [Rhodobacter sphaeroides ATCC
           17029]
 gi|123590065|sp|Q3IW83|RRMF_RHOS4 RecName: Full=Probable rRNA maturation factor
 gi|77390017|gb|ABA81201.1| Protein of unknown function UPF0054 [Rhodobacter sphaeroides 2.4.1]
 gi|126105849|gb|ABN78379.1| protein of unknown function UPF0054 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 167

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 19/169 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           ++  +E+  W +E+ L  L        ++ L             L ++  D  RI  LN 
Sbjct: 5   VETVIEDGRW-EELDLPALATRAAEATLAALDMPAEGFT-----LVVMGCDDARIAELNG 58

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCS-------------SLMLGDIVLAYEIIEIEANVLG 119
            +R   KPTNVLS+P+   +S+                   LGD+ +A+E  + EA   G
Sbjct: 59  AFRQKGKPTNVLSWPSEERASEEPGMAPEPPEPGDPEDPEPLGDVAIAFETCQREAAEQG 118

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           K   +H+ HL++HG LHLLGYDHV++ D  +ME  E  IL  LG+ DPY
Sbjct: 119 KPVTDHVTHLLVHGVLHLLGYDHVEEADGDLMEATETRILAGLGVPDPY 167


>gi|254880983|ref|ZP_05253693.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319639991|ref|ZP_07994718.1| metalloprotease [Bacteroides sp. 3_1_40A]
 gi|254833776|gb|EET14085.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317388269|gb|EFV69121.1| metalloprotease [Bacteroides sp. 3_1_40A]
          Length = 138

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E++ +F    +I  +N +Y   D  T++++F               GD+ ++ + +
Sbjct: 32  KRVGEIAYIFCSDDKILEVNRQYLQHDYYTDIITFDYCEGDRIS------GDLFISLDTV 85

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              A    + ++  L  +IIHG LHL G +     +  +ME  E   L  + +
Sbjct: 86  RSNAEQFEQPYDRELHRVIIHGILHLCGINDKGPGEREIMEAAENKALALISL 138


>gi|261878861|ref|ZP_06005288.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270334540|gb|EFA45326.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 143

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L ++        +  + +      + +  +  +F D  +I  +N +Y G D  T++++
Sbjct: 9   VELPSIKHRETTAWIKAVAAT---YGKRVGSIGYMFVDDKKILEVNNQYLGHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F            ++ GD+V++ + +   A + GK++ + L  +IIHG LHL G +    
Sbjct: 66  FDYDDGD------VINGDLVISLDTVRSNAELFGKDYADELNRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L  L
Sbjct: 120 GEREIMEAHEEKALALL 136


>gi|148270413|ref|YP_001244873.1| hypothetical protein Tpet_1283 [Thermotoga petrophila RKU-1]
 gi|281412720|ref|YP_003346799.1| protein of unknown function UPF0054 [Thermotoga naphthophila
           RKU-10]
 gi|166200326|sp|A5IM74|RRMF_THEP1 RecName: Full=Probable rRNA maturation factor
 gi|147735957|gb|ABQ47297.1| protein of unknown function UPF0054 [Thermotoga petrophila RKU-1]
 gi|281373823|gb|ADA67385.1| protein of unknown function UPF0054 [Thermotoga naphthophila
           RKU-10]
          Length = 150

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             + V   + +    +   V ++++      I+ LN ++R  D+PT+VL+F         
Sbjct: 13  LLEDVKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRSHDQPTDVLTFLLMEED--- 69

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGL 154
               + G+I +   I+E  A      FE  L+ ++IHG LHL GYDH  +D+ +  M   
Sbjct: 70  ----VYGEIYVCPMIVEENAKEFSNTFEKELLEVVIHGILHLAGYDHEFEDRKSKEMFEK 125

Query: 155 ERSILED 161
           ++  +E+
Sbjct: 126 QKKYVEE 132


>gi|298483806|ref|ZP_07001978.1| metalloprotease [Bacteroides sp. D22]
 gi|298269993|gb|EFI11582.1| metalloprotease [Bacteroides sp. D22]
          Length = 139

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 9/134 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +    + +  + +      + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 10  VKMPDIKKRETTEWIKAVAAS---YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 66

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F             + GD+ ++ + I   A   G  +EN L  +IIHG LHL G +    
Sbjct: 67  FDYCEGD------RLSGDLFISLDTIRTNAEQFGTSYENELHRVIIHGILHLCGINDKGP 120

Query: 146 KDACVMEGLERSIL 159
            +  +MEG E   L
Sbjct: 121 GEREIMEGAENKAL 134


>gi|299145303|ref|ZP_07038371.1| putative metalloprotease [Bacteroides sp. 3_1_23]
 gi|298515794|gb|EFI39675.1| putative metalloprotease [Bacteroides sp. 3_1_23]
          Length = 139

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E++ +F    +I  +N +Y   D  T++++F             + GD+ ++ + I
Sbjct: 33  KRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIITFDYCEGD------RLSGDLFISLDTI 86

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              A   G  +E+ L  +IIHG LHL G +     +  VME  E   L
Sbjct: 87  RTNAEQFGASYEDELHRVIIHGILHLCGINDKGPGEREVMEAAENQAL 134


>gi|308177462|ref|YP_003916868.1| metalloprotease [Arthrobacter arilaitensis Re117]
 gi|307744925|emb|CBT75897.1| putative metalloprotease [Arthrobacter arilaitensis Re117]
          Length = 157

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E     D   +  L E V      +             E+S+VF D   +  L
Sbjct: 1   MSIEVNNETDYEVDLKDVNALAESVLQAMFLH----------PETEVSVVFIDEDAMSAL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + E+  ++ PT+V+SFP              + +LGDIV+   I E +A   G    + +
Sbjct: 51  HVEWMDLEGPTDVMSFPMDELRPGTAGAPGENGILGDIVICPSIAEAQAKAGGHSTHDEI 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL-GINDPYEV 170
           + L  HG LHL+G+DH++  +   M GL+R +LE   G   P E 
Sbjct: 111 LLLTTHGLLHLMGFDHMEPAEKEEMFGLQRQLLESYTGRPAPKET 155


>gi|325299508|ref|YP_004259425.1| metalloprotease ybeY [Bacteroides salanitronis DSM 18170]
 gi|324319061|gb|ADY36952.1| metalloprotease ybeY [Bacteroides salanitronis DSM 18170]
          Length = 140

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 12/135 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           +R      + KAV+          + + E++ +F    +I  +N +Y   D  T++++F 
Sbjct: 14  IRKRETTEWVKAVAQT------YGKKVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITFD 67

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
            +        + + GD+ ++ + +   A      ++  L  +IIHG LHL G +     +
Sbjct: 68  YSE------GNRIAGDLFISLDTVRTNAEQFNAPYDTELHRVIIHGILHLCGINDKGPGE 121

Query: 148 ACVMEGLERSILEDL 162
             +ME  E   L  L
Sbjct: 122 REIMEAAENKALALL 136


>gi|156391269|ref|XP_001635691.1| predicted protein [Nematostella vectensis]
 gi|156222787|gb|EDO43628.1| predicted protein [Nematostella vectensis]
          Length = 169

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 10/140 (7%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
             E +  +    L+     +K +  ++S+V     RI++LN +YR  +  T+VL+FP   
Sbjct: 14  FSEALLERDARVLVQ---LLKADRFDVSIVCAGGKRIKSLNLKYRRRNVQTDVLAFPYFE 70

Query: 91  ASSDGCSSLM-------LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
               G            LGD++L   +I  +     K  + +L  LI HG  HLLGY H 
Sbjct: 71  NMKPGVLPNPKLQDDWNLGDVILGMPVIHQDCQEDNKSVQEYLPVLITHGLCHLLGYTHD 130

Query: 144 DDKDACVMEGLERSILEDLG 163
            +++   M   E+ +L    
Sbjct: 131 TEQNLQQMHKKEKEVLSGFN 150


>gi|153807201|ref|ZP_01959869.1| hypothetical protein BACCAC_01479 [Bacteroides caccae ATCC 43185]
 gi|149130321|gb|EDM21531.1| hypothetical protein BACCAC_01479 [Bacteroides caccae ATCC 43185]
          Length = 138

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           I +  + +    + +  + +      + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 10  IKMPEIKKRETTEWIKAVAAS---YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 66

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F             + GD+ ++ + +   A   G  ++N L  +IIHG LHL G +    
Sbjct: 67  FDYCEGD------RLSGDLFISLDTVRTNAEQFGASYDNELHRVIIHGILHLCGINDKGP 120

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L  L
Sbjct: 121 GEREIMEAAENKALAML 137


>gi|104162024|emb|CAJ75732.1| predicted metal-dependent hydrolaseinG [uncultured Thermotogales
           bacterium]
          Length = 121

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 7/111 (6%)

Query: 47  GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVL 106
                 +I  L+++ TD   IE +N E+R  ++PT+VLSF        G     +GDIV+
Sbjct: 7   AELGDRDIGTLNILLTDDSEIERINKEFRHKNEPTDVLSFQY------GLEEETIGDIVI 60

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLER 156
           + + I  +A      FE  L +++IHG LH++GY H   D +   +  L+R
Sbjct: 61  SLDRISEQAAEFDNSFEEELYYILIHGVLHVIGYTHHGYDDEGEEIFDLQR 111


>gi|261211995|ref|ZP_05926281.1| predicted metal-dependent hydrolase [Vibrio sp. RC341]
 gi|260838603|gb|EEX65254.1| predicted metal-dependent hydrolase [Vibrio sp. RC341]
          Length = 78

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 49/76 (64%)

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
               +LGD+V+  +++E EA    K  + H  H+++HG LHLLGYDH++D +A  ME LE
Sbjct: 1   MEMDLLGDLVICRQVVEHEAIEQNKPLQAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLE 60

Query: 156 RSILEDLGINDPYEVD 171
             I++++G  DPY  +
Sbjct: 61  TEIMQEMGFTDPYLAE 76


>gi|146298765|ref|YP_001193356.1| hypothetical protein Fjoh_1004 [Flavobacterium johnsoniae UW101]
 gi|189038538|sp|A5FL87|RRMF_FLAJ1 RecName: Full=Probable rRNA maturation factor
 gi|146153183|gb|ABQ04037.1| protein of unknown function UPF0054 [Flavobacterium johnsoniae
           UW101]
          Length = 139

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E       E  F   +S +I      ++N  E++ +F D   +  +N EY   D  T+++
Sbjct: 7   ETEFSLDNEQAFTDWLSAVIVSE---EKNEGEINYIFCDDEYLHKINVEYLNHDTLTDII 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF     +         GDI ++ E +E  A      FE  L  ++ HG LH  GY    
Sbjct: 64  SFDYTVGNEIS------GDIFVSVERVEDNAKDFNVSFEEELKRVLAHGILHYCGYKDKS 117

Query: 145 DKDACVMEGLERS 157
           D DA +M   E  
Sbjct: 118 DADAELMRSKEDE 130


>gi|32266731|ref|NP_860763.1| putative metalloprotease [Helicobacter hepaticus ATCC 51449]
 gi|46577395|sp|Q7VGT8|RRMF_HELHP RecName: Full=Probable rRNA maturation factor
 gi|32262782|gb|AAP77829.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 163

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM------LGDIVLAYEI 110
           L ++  DS  +  +NF +R  +  T+VLSFP   +       L       LG +V+ YE+
Sbjct: 42  LEVLAVDSQNMREINFAHRAKNSTTDVLSFPLDVSEGADSHILAKQMKICLGSVVINYEL 101

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
            +  A   G   ++ +  L IHGFLH+LGYDH  D        LE+ I+E LG+ 
Sbjct: 102 AQKVAKQRGHSTQDEISLLFIHGFLHILGYDHEVDNGEQ--RALEQKIIESLGLK 154


>gi|332828365|gb|EGK01074.1| metalloprotease [Dysgonomonas gadei ATCC BAA-286]
          Length = 139

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            +E+ L ++ +      + ++ +     K+ + ++S +F    +I  +N +Y   D  T+
Sbjct: 7   AEEVKLPSIKKRETTSWIKSVAAS---YKKRVGDISFIFCSDKKILEINNQYLQHDYYTD 63

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +++F      +        GDI ++ + ++  A      +   +  +IIHG LHL G + 
Sbjct: 64  IITFDYTEGETIS------GDIFISLDTVKSNAEKFETNYNEEIHRIIIHGILHLCGIND 117

Query: 143 VDDKDACVMEGLERSILEDL 162
               +   M G E   L+ L
Sbjct: 118 KGPGEREFMTGCENKALKML 137


>gi|237720597|ref|ZP_04551078.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450348|gb|EEO56139.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 139

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 9/134 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +    + +  + +      + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 10  VKMPDIKKRETTEWIKAVAAS---YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 66

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F             + GD+ ++ + I   A   G  +E+ L  +IIHG LHL G +    
Sbjct: 67  FDYCEGD------RLSGDLFISLDTIRTNAEQFGASYEDELHRVIIHGILHLCGINDKGP 120

Query: 146 KDACVMEGLERSIL 159
            +  VME  E   L
Sbjct: 121 GEREVMEAAENQAL 134


>gi|150003785|ref|YP_001298529.1| hypothetical protein BVU_1217 [Bacteroides vulgatus ATCC 8482]
 gi|294777391|ref|ZP_06742842.1| metalloprotein, YbeY family [Bacteroides vulgatus PC510]
 gi|172048643|sp|A6KZP3|RRMF_BACV8 RecName: Full=Probable rRNA maturation factor
 gi|149932209|gb|ABR38907.1| conserved hypothetical protein with conserved domain [Bacteroides
           vulgatus ATCC 8482]
 gi|294448459|gb|EFG17008.1| metalloprotein, YbeY family [Bacteroides vulgatus PC510]
          Length = 138

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E++ +F    +I  +N +Y   D  T++++F               GD+ ++ + +
Sbjct: 32  KRVGEIAYIFCSDDKILEVNRQYLQHDYYTDIITFDYCEGDRIS------GDLFISLDTV 85

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
              A    + ++  L  +IIHG LHL G +     +  +ME  E   L  + +
Sbjct: 86  RSNAEQFEQPYDRELHRVIIHGILHLCGINDKGPGEREIMEAAENKALALISL 138


>gi|126662720|ref|ZP_01733719.1| hypothetical protein FBBAL38_05175 [Flavobacteria bacterium BAL38]
 gi|126626099|gb|EAZ96788.1| hypothetical protein FBBAL38_05175 [Flavobacteria bacterium BAL38]
          Length = 139

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E       E  +   +S +I    F   +  E++ +F +   +  +N EY   D  T+++
Sbjct: 7   ETDFLLENEEQYEVWISRIIESEGF---DEGEINYIFCNDEYLHKINVEYLDHDTLTDII 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF           +L+ GDI ++ E ++  AN     F+  L  ++ HG LH  GY    
Sbjct: 64  SFDYT------VGNLVQGDIFISIERVQDNANDFNVSFDEELKRVLSHGVLHYCGYKDKT 117

Query: 145 DKDACVMEGLERSILEDL 162
            KD  +M   E   ++  
Sbjct: 118 PKDEALMRSKEEEKMQMF 135


>gi|237716840|ref|ZP_04547321.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405610|ref|ZP_06082160.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|229442823|gb|EEO48614.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356485|gb|EEZ05575.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|295086058|emb|CBK67581.1| conserved hypothetical protein TIGR00043 [Bacteroides xylanisolvens
           XB1A]
          Length = 139

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 9/134 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +    + +  + +      + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 10  VKMPDIKKRETTEWIKAVAAS---YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 66

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F             + GD+ ++ + I   A   G  +E+ L  +IIHG LHL G +    
Sbjct: 67  FDYCEGD------RLSGDLFISLDTIHTNAEQFGTSYEDELHRVIIHGILHLCGINDKGP 120

Query: 146 KDACVMEGLERSIL 159
            +  +MEG E   L
Sbjct: 121 GEREIMEGAENKAL 134


>gi|256372050|ref|YP_003109874.1| protein of unknown function UPF0054 [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008634|gb|ACU54201.1| protein of unknown function UPF0054 [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 181

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 17/138 (12%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            +E     + E + A+  + +++        + ELS+VF D+  I +LN  YRG   PT+
Sbjct: 14  ANEQSAVEIHEAMVARLATEVLTA--LGVHGVSELSVVFVDAETIASLNARYRGRVGPTD 71

Query: 83  VLSFPTAFASSDGCS---------SLMLGDIVLAYEIIEIEANVLGK------EFENHLV 127
           VLSF       D              +LGD+V+  E+    A              + + 
Sbjct: 72  VLSFAIDDVGDDASEHRPSTASGLPTLLGDVVICPEVARTNAPEHRGDRGHDGSVGDEVA 131

Query: 128 HLIIHGFLHLLGYDHVDD 145
            L+IHG LH+ G+DH  D
Sbjct: 132 LLLIHGILHIRGWDHEAD 149


>gi|294675104|ref|YP_003575720.1| hypothetical protein PRU_2470 [Prevotella ruminicola 23]
 gi|294471648|gb|ADE81037.1| conserved hypothetical protein TIGR00043 [Prevotella ruminicola 23]
          Length = 140

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           +    + +      +  + +      + + E+  +F +  +I  +N ++ G D  T++++
Sbjct: 9   VKFPNIKKRETTSWIRQVAAS---YGKKVGEIGYLFVNDEKILEVNNQFLGHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F      +        GDI ++ + +   A+  G+ ++  L  +IIHG LHL G +    
Sbjct: 66  FDYCEGKTIS------GDIYISVDTVFTNADKFGRPYDEELHRVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSILEDL 162
            +  +ME  E   L  L
Sbjct: 120 GEREIMEAAEDKALALL 136


>gi|189460233|ref|ZP_03009018.1| hypothetical protein BACCOP_00870 [Bacteroides coprocola DSM 17136]
 gi|189433094|gb|EDV02079.1| hypothetical protein BACCOP_00870 [Bacteroides coprocola DSM 17136]
          Length = 140

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 12/135 (8%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           ++      + KAV+          + + E++ +F    +I  +N +Y   D  T++++F 
Sbjct: 14  IKKRETTAWIKAVAET------YGKKVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITFD 67

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                     + + GD+ ++ + +   A   G  +E  L  +IIHG LHL G +     +
Sbjct: 68  YCE------GNRIAGDLFISLDTVRTNAEQFGATYETELHRVIIHGILHLCGINDKGPGE 121

Query: 148 ACVMEGLERSILEDL 162
             +ME  E   L+ L
Sbjct: 122 REIMEAAENKALDLL 136


>gi|325123553|gb|ADY83076.1| hypothetical protein BDGL_002490 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 158

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 12/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +   +   +   E+ +   D    + L
Sbjct: 1   MKISLSLQQDFQSPELELK---RAQLKKIIETTLR--HVGYKEDCEIGVACVDLDESQQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +L LGD+V+   ++  EA    K  +NH  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAH 115

Query: 129 LIIHGFLHLLGYDHV---DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LHLLGYDH    +D +     GLE  IL  L I +PY+
Sbjct: 116 LLVHGVLHLLGYDHETSDEDAEEME--GLEIEILAKLNIANPYQ 157


>gi|295105853|emb|CBL03396.1| conserved hypothetical protein TIGR00043 [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 155

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +D+QI  +      +++ L  L + V A+            K    E+S+ F     I  
Sbjct: 1   MDIQINYDYRKDELEKLPLHELAQFVLARE----------DKPFNTEVSVSFVTDEAIAE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSD-------GCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           LN  YR  + PT+VLSF     + D             LGD+++A ++   +    G  F
Sbjct: 51  LNERYRHKEGPTDVLSFECDGVNDDLSAMTLAEDPVYELGDVIIAPDVAARQTREFGTSF 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E  +  L++HG LHL GYDH+ D +A VME  E  ILE  
Sbjct: 111 EEEISLLLVHGLLHLCGYDHIADDEAEVMEKREAEILEAW 150


>gi|225851483|ref|YP_002731717.1| hypothetical protein PERMA_1963 [Persephonella marina EX-H1]
 gi|254801505|sp|C0QSS1|RRMF_PERMH RecName: Full=Probable rRNA maturation factor
 gi|225645941|gb|ACO04127.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 153

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 27/150 (18%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E+  R++ +    +AV  ++     +  + VE+S+  TD   I+ +N ++RG DKPT+VL
Sbjct: 9   ELGDRSITKKFVKEAVEKILE---HLNIDNVEISITLTDDSTIKEINRQWRGKDKPTDVL 65

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH-----------LIIHG 133
           SFP            +LGD+V++    + +A  +G  +   ++                 
Sbjct: 66  SFPIDEKPP-KYRYRILGDVVISLPYAKKQAEEIGLPYREEIIRLLIHGILHLLG----- 119

Query: 134 FLHLLGYDHV-DDKDACVMEGLERSILEDL 162
                 YDH   +K+A VM  L+  I E++
Sbjct: 120 ------YDHERSEKEAQVMFSLQDEIFENI 143


>gi|184159547|ref|YP_001847886.1| metal-dependent hydrolase [Acinetobacter baumannii ACICU]
 gi|239504223|ref|ZP_04663533.1| metal-dependent hydrolase [Acinetobacter baumannii AB900]
 gi|260557078|ref|ZP_05829295.1| metal-dependent hydrolase [Acinetobacter baumannii ATCC 19606]
 gi|332873008|ref|ZP_08440967.1| translation metalloprotein YbeY [Acinetobacter baumannii 6014059]
 gi|238685532|sp|A3M934|RRMF_ACIBT RecName: Full=Probable rRNA maturation factor
 gi|238691001|sp|B2HZ57|RRMF_ACIBC RecName: Full=Probable rRNA maturation factor
 gi|183211141|gb|ACC58539.1| predicted metal-dependent hydrolase [Acinetobacter baumannii ACICU]
 gi|193078437|gb|ABO13428.2| hypothetical protein A1S_3031 [Acinetobacter baumannii ATCC 17978]
 gi|260409684|gb|EEX02985.1| metal-dependent hydrolase [Acinetobacter baumannii ATCC 19606]
 gi|322509457|gb|ADX04911.1| metal-dependent hydrolase [Acinetobacter baumannii 1656-2]
 gi|323519478|gb|ADX93859.1| metal-dependent hydrolase [Acinetobacter baumannii TCDC-AB0715]
 gi|332738790|gb|EGJ69658.1| translation metalloprotein YbeY [Acinetobacter baumannii 6014059]
          Length = 158

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +   +   +   E+ +   D      L
Sbjct: 1   MKISLSLQQDFQSPELELK---RAQLKKIIETTLR--HVGYKEDCEIGIACVDLEESHQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +L LGD+V+   ++  EA    K  +NH  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAH 115

Query: 129 LIIHGFLHLLGYDHV---DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LHLLGYDH    +D +     GLE  IL  L I +PY+
Sbjct: 116 LLVHGVLHLLGYDHETSDEDAEEME--GLEIEILAKLNIANPYQ 157


>gi|257791393|ref|YP_003181999.1| hypothetical protein Elen_1642 [Eggerthella lenta DSM 2243]
 gi|317490531|ref|ZP_07949009.1| hypothetical protein HMPREF1023_02709 [Eggerthella sp. 1_3_56FAA]
 gi|325831379|ref|ZP_08164633.1| translation metalloprotein YbeY [Eggerthella sp. HGA1]
 gi|257475290|gb|ACV55610.1| protein of unknown function UPF0054 [Eggerthella lenta DSM 2243]
 gi|316910382|gb|EFV32013.1| hypothetical protein HMPREF1023_02709 [Eggerthella sp. 1_3_56FAA]
 gi|325486633|gb|EGC89081.1| translation metalloprotein YbeY [Eggerthella sp. HGA1]
          Length = 153

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/160 (31%), Positives = 72/160 (45%), Gaps = 18/160 (11%)

Query: 11  LDLQIAVENALWGDE-IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
           +D+QI  +      E + L  L + V A+            K    E+S+ F     I  
Sbjct: 1   MDIQINYDYRKEDLEKLPLHELTQFVLARE----------DKPFNTEVSISFVTDEAIAE 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSD-------GCSSLMLGDIVLAYEIIEIEANVLGKEF 122
           LN  YR  + PT+VLSF       D             LGD+V+A ++   +    G  F
Sbjct: 51  LNERYRHKEGPTDVLSFECDGVDDDLSAMTLAEDPVYELGDVVIAPDVASRQTREFGTTF 110

Query: 123 ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           E  +  L++HG LHL GYDH++D +A VME  E  ILE  
Sbjct: 111 EEEISLLLVHGLLHLCGYDHIEDDEAEVMEKREAEILEAW 150


>gi|86134802|ref|ZP_01053384.1| uncharacterized protein family UPF0054 [Polaribacter sp. MED152]
 gi|85821665|gb|EAQ42812.1| uncharacterized protein family UPF0054 [Polaribacter sp. MED152]
          Length = 137

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 11/142 (7%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E       E      ++ + S+  F    + E++ +F D   +  LN ++   D  T+++
Sbjct: 7   ETDFILEDETSLKNWINAVASQQEF---EVGEINYIFCDDAYLHKLNVKFLNHDTLTDII 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF       +    L+ GDI ++ E ++  A+     F   L  ++IHG LH +GY    
Sbjct: 64  SF------DNSLGKLLNGDIFISVERVKDNADDFKVSFHEELHRVMIHGILHYMGYKDKS 117

Query: 145 DKDACVMEGLERSILEDLGIND 166
           + +   M   E   L  L +++
Sbjct: 118 EDEKKEMRKQEN--LAILKLSN 137


>gi|115380060|ref|ZP_01467104.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|310822820|ref|YP_003955178.1| hypothetical protein STAUR_5586 [Stigmatella aurantiaca DW4/3-1]
 gi|115362935|gb|EAU62126.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|309395892|gb|ADO73351.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 282

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 44/120 (36%), Gaps = 22/120 (18%)

Query: 55  VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIE 114
            ELSL       I  LN  +R  DK T+VLSFP             LGD+V++ +  + +
Sbjct: 159 CELSLSLVGDRAIRRLNRTWRKKDKATDVLSFPAGELPKGTPGPRQLGDVVISIDTAKRQ 218

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-----------DACVMEGLERSILEDLG 163
           A   G+  E+ +   +                           DA  M  LE  +L + G
Sbjct: 219 AKEYGRTMESEMARYLA-----------HGLLHLLGHDHERTYDARKMATLEEKLLGERG 267


>gi|53711447|ref|YP_097439.1| hypothetical protein BF0156 [Bacteroides fragilis YCH46]
 gi|60679714|ref|YP_209858.1| hypothetical protein BF0118 [Bacteroides fragilis NCTC 9343]
 gi|253564495|ref|ZP_04841952.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764843|ref|ZP_06093118.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|62901265|sp|Q650C1|RRMF_BACFR RecName: Full=Probable rRNA maturation factor
 gi|81317213|sp|Q5LIY0|RRMF_BACFN RecName: Full=Probable rRNA maturation factor
 gi|52214312|dbj|BAD46905.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60491148|emb|CAH05896.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|251948271|gb|EES88553.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263254227|gb|EEZ25661.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301161178|emb|CBW20716.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 139

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 12/134 (8%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            ++      + KAV+         ++ I E++ +F    +I  +N +Y   D  T++++F
Sbjct: 14  DIKKRETTEWIKAVAAT------YEKRIGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF 67

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                      + + GD+ ++ E ++  +      +E  L   IIHG LHL G +     
Sbjct: 68  DYCE------GNRLSGDLFISLETVKTNSEQFNTPYEEELHRTIIHGILHLCGINDKGPG 121

Query: 147 DACVMEGLERSILE 160
           +  +ME  E   L 
Sbjct: 122 EREIMEAAENKALA 135


>gi|312890776|ref|ZP_07750306.1| protein of unknown function UPF0054 [Mucilaginibacter paludis DSM
           18603]
 gi|311296739|gb|EFQ73878.1| protein of unknown function UPF0054 [Mucilaginibacter paludis DSM
           18603]
          Length = 142

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 10/145 (6%)

Query: 21  LWGDEIHLRTLCEVVFAKAV-SNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
            + ++I  +   +      + + +I++GY +K    EL+ +F     +  LN +Y   D 
Sbjct: 7   FFEEDIQFKPKNKTRLRDWIKAAVIAEGYKLK----ELNYIFCSDRYLIELNQQYLNHDT 62

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F  + +       +++GDI ++ E I+  A++        L  +IIHG LHLLG
Sbjct: 63  YTDIITFDNSESE-----GIVIGDIFISVERIKENASLFSVSEAEELHRVIIHGVLHLLG 117

Query: 140 YDHVDDKDACVMEGLERSILEDLGI 164
           Y      D  +M   E   L  L +
Sbjct: 118 YKDKTKSDKALMTSKENLYLSQLSV 142


>gi|34540326|ref|NP_904805.1| hypothetical protein PG0510 [Porphyromonas gingivalis W83]
 gi|62901349|sp|Q7MWS9|RRMF_PORGI RecName: Full=Probable rRNA maturation factor
 gi|34396638|gb|AAQ65704.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 151

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 9/142 (6%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + + + L  +   +  K ++ + S+     + + E+S +F D   I   N E+   D  
Sbjct: 6   FYAEGVSLPRIRRRIVGKWIAEVCSR---YGKAVGEISYLFCDDEYILKANQEFLDHDYY 62

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T++++F +  A +      + GD++++ + +   A  L   +E+ L  +IIHG LHL G 
Sbjct: 63  TDIITFDSCEADT------VNGDLLISLDTVRSNARALDLRYEDELHRVIIHGILHLCGL 116

Query: 141 DHVDDKDACVMEGLERSILEDL 162
                KD   M   E   L  L
Sbjct: 117 KDKSKKDEAQMRAAEEKALVML 138


>gi|119511142|ref|ZP_01630260.1| hypothetical protein N9414_17021 [Nodularia spumigena CCY9414]
 gi|119513512|ref|ZP_01632533.1| hypothetical protein N9414_11289 [Nodularia spumigena CCY9414]
 gi|119461828|gb|EAW42844.1| hypothetical protein N9414_11289 [Nodularia spumigena CCY9414]
 gi|119464237|gb|EAW45156.1| hypothetical protein N9414_17021 [Nodularia spumigena CCY9414]
          Length = 175

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/159 (30%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 12  DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
           D  I V    W D           F + + +L S          E+ L  TD   I++LN
Sbjct: 24  DKDIRVTAETWSD----------WFHRWLESLHSD--LPPAPSYEIGLRLTDDAEIQSLN 71

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHL 126
            +YR  DKPT+VLSF                 L LGDIV++    E +A   G      L
Sbjct: 72  AQYRHQDKPTDVLSFAALEVDFPQIPEMLVAPLYLGDIVISVNTAERQAQQQGHSLPTEL 131

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             L  HG LHLLG+DH D++    M   +  +L+ + I+
Sbjct: 132 AWLAAHGLLHLLGWDHPDEEQLMQMLKQQVELLKKISID 170


>gi|332664486|ref|YP_004447274.1| metalloprotease ybeY [Haliscomenobacter hydrossis DSM 1100]
 gi|332333300|gb|AEE50401.1| metalloprotease ybeY [Haliscomenobacter hydrossis DSM 1100]
          Length = 159

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 9/143 (6%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + + +EI+       +  + +  ++S+    K  ++ ++ VF D   +  LN EY   D 
Sbjct: 21  SFFAEEIYFEPANPELLRRWIEEIVSRE---KRELIFINYVFCDDPYLLKLNQEYLQHDT 77

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++FP           ++ GD+ ++ + I   A+  G  FE  L  ++IHG LHL G
Sbjct: 78  LTDIITFPYHD------PPIVEGDVFISVDRIHDNAHQFGVTFEQELHRVMIHGVLHLCG 131

Query: 140 YDHVDDKDACVMEGLERSILEDL 162
           Y     ++   M   E   L  L
Sbjct: 132 YPDKAPEEKARMTEKEDEALNLL 154


>gi|255690276|ref|ZP_05413951.1| putative metalloprotease [Bacteroides finegoldii DSM 17565]
 gi|260624179|gb|EEX47050.1| putative metalloprotease [Bacteroides finegoldii DSM 17565]
          Length = 139

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 58/135 (42%), Gaps = 9/135 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +    + +  + +      + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 10  VKMPDIKKRETTEWIKAVAAS---YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 66

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F             + GD+ ++ + I   A   G  ++N L  +IIHG LHL G +    
Sbjct: 67  FDYCEGD------RLSGDLFISLDTIRTNAEQFGASYDNELHRVIIHGILHLCGINDKGP 120

Query: 146 KDACVMEGLERSILE 160
            +  +ME  E   L 
Sbjct: 121 GEREIMEAAENKALA 135


>gi|293373384|ref|ZP_06619740.1| metalloprotein, YbeY family [Bacteroides ovatus SD CMC 3f]
 gi|292631670|gb|EFF50292.1| metalloprotein, YbeY family [Bacteroides ovatus SD CMC 3f]
          Length = 128

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 12/133 (9%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            ++      + KAV+          + + E++ +F    +I  +N +Y   D  T++++F
Sbjct: 3   DIKKRETTEWIKAVAA------SYGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF 56

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                        + GD+ ++ + I   A   G  +E+ L  +IIHG LHL G +     
Sbjct: 57  DYCEGD------RLSGDLFISLDTIRTNAEQFGASYEDELHRVIIHGILHLCGINDKGPG 110

Query: 147 DACVMEGLERSIL 159
           +  VME  E   L
Sbjct: 111 EREVMEAAENQAL 123


>gi|260549789|ref|ZP_05824005.1| metal-dependent hydrolase [Acinetobacter sp. RUH2624]
 gi|260407039|gb|EEX00516.1| metal-dependent hydrolase [Acinetobacter sp. RUH2624]
          Length = 158

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 12/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +   +   +   E+ +   D      L
Sbjct: 1   MKISLSLQQDFQSPELELK---RAQLKKIIETTLR--HVGYKEDCEIGVACVDLEESHQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +L LGD+V+   ++  EA    K  +NH  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAH 115

Query: 129 LIIHGFLHLLGYDHV---DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LHLLGYDH    +D +      LE  IL  L I +PY+
Sbjct: 116 LLVHGVLHLLGYDHEISDEDAEEME--SLEIEILAKLNIANPYQ 157


>gi|188995326|ref|YP_001929578.1| hypothetical protein PGN_1462 [Porphyromonas gingivalis ATCC 33277]
 gi|238691487|sp|B2RKT6|RRMF_PORG3 RecName: Full=Probable rRNA maturation factor
 gi|188595006|dbj|BAG33981.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 151

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 9/142 (6%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + + + L  +   +  K ++ + S+     + + E+S +F D   I   N E+   D  
Sbjct: 6   FYAEGVSLPRIRRRIVGKWIAEVCSR---YGKAVGEISYLFCDDEYILKANQEFLDHDYY 62

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T++++F +  A +      + GD++++ + +   A  L   +E+ L  +IIHG LHL G 
Sbjct: 63  TDIITFDSCEADT------VNGDLLISLDTVRSNARALDLRYEDELHRVIIHGILHLCGL 116

Query: 141 DHVDDKDACVMEGLERSILEDL 162
                KD   M   E   L  L
Sbjct: 117 KDKSKKDEAQMRAAEEEALVML 138


>gi|294644443|ref|ZP_06722206.1| metalloprotein, YbeY family [Bacteroides ovatus SD CC 2a]
 gi|294810438|ref|ZP_06769095.1| metalloprotein, YbeY family [Bacteroides xylanisolvens SD CC 1b]
 gi|292640278|gb|EFF58533.1| metalloprotein, YbeY family [Bacteroides ovatus SD CC 2a]
 gi|294442403|gb|EFG11213.1| metalloprotein, YbeY family [Bacteroides xylanisolvens SD CC 1b]
          Length = 128

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           + + E++ +F    +I  +N +Y   D  T++++F             + GD+ ++ + I
Sbjct: 22  KRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIITFDYCEGD------RLSGDLFISLDTI 75

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              A   G  +E+ L  +IIHG LHL G +     +  +MEG E   L
Sbjct: 76  HTNAEQFGTSYEDELHRVIIHGILHLCGINDKGPGEREIMEGAENKAL 123


>gi|222823735|ref|YP_002575309.1| conserved hypothetical protein (UPF0054 domain protein)
           [Campylobacter lari RM2100]
 gi|222538957|gb|ACM64058.1| conserved hypothetical protein (UPF0054 domain protein)
           [Campylobacter lari RM2100]
          Length = 137

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV  D   +  +N   RG+DK T+VLSFP            +LG IV+  + +  +A 
Sbjct: 25  IELVLVDEKIMHEINLNQRGVDKTTDVLSFPLVQNCE-----NLLGSIVINLDEVSKKAM 79

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
                 E  +  L IH  LHL GYDH  + D   M   E+  +E   + 
Sbjct: 80  EYKHSNEEEMALLFIHAMLHLQGYDH--EVDQGQMRQKEQEWIEYFKLP 126


>gi|21672692|ref|NP_660759.1| hypothetical protein BUsg427 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|21623332|gb|AAM67970.1| hypothetical 17.5 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 105

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           ++ +N +YRG +K TN+LSF   F      +  +LGD+VL  +IIE E+    K  E+  
Sbjct: 1   MKNINLKYRGKNKSTNILSF--KFDLFINKNQTLLGDLVLCKKIIEKESLKYQKTLESRW 58

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
            H+IIHG LHLLGYDH + K+  +ME +E  I+  L    PY
Sbjct: 59  AHMIIHGTLHLLGYDHKNKKEKKIMEKIENKIMLFLNYEKPY 100


>gi|154249670|ref|YP_001410495.1| hypothetical protein Fnod_0988 [Fervidobacterium nodosum Rt17-B1]
 gi|154153606|gb|ABS60838.1| protein of unknown function UPF0054 [Fervidobacterium nodosum
           Rt17-B1]
          Length = 147

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 3/128 (2%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F + V N +      +   V++S +F     +  +N +YRG D  T+VL+F     +   
Sbjct: 14  FIQKVKNELEAIVKKEIGNVDVSFIFITPETMAEMNKQYRGKDGATDVLTFVYGNNAEGE 73

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV-DDKDACVMEGL 154
                 G   L  E I   +   G   E  L+ +++H  LH+ GYDH    +++  M   
Sbjct: 74  EEPYSEG--YLCLEKILENSKEFGNSLEKELLTVLVHSILHMAGYDHEYSSENSEEMFKK 131

Query: 155 ERSILEDL 162
           +   ++ +
Sbjct: 132 QEEYVDKI 139


>gi|255010260|ref|ZP_05282386.1| hypothetical protein Bfra3_14062 [Bacteroides fragilis 3_1_12]
 gi|313148055|ref|ZP_07810248.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136822|gb|EFR54182.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 139

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 12/134 (8%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
            ++      + KAV+          + I E++ +F    +I  +N +Y   D  T++++F
Sbjct: 14  DIKKRETTEWIKAVAAT------YGKRIGEIAYIFCSDEKILEVNRQYLQHDYYTDIITF 67

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                        + GD+ ++ E ++  +      ++  L   IIHG LHL G +     
Sbjct: 68  DYCQGD------RLSGDLFISLETVKTNSEQFNTTYDEELHRTIIHGILHLCGINDKGPG 121

Query: 147 DACVMEGLERSILE 160
           +  +ME  E   L 
Sbjct: 122 EREIMEAAENRALA 135


>gi|315452585|ref|YP_004072855.1| putative metalloprotease HPK [Helicobacter felis ATCC 49179]
 gi|315131637|emb|CBY82265.1| putative metalloprotease HPK [Helicobacter felis ATCC 49179]
          Length = 146

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 7/109 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV  DS RI+ LN +YRG+DK T+VLSFP    +       +LG +V+  E  ++EA 
Sbjct: 35  VELVLVDSERIQELNRDYRGVDKSTDVLSFPIEMPAQ-----NLLGSVVINVECAQMEAQ 89

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
             G    + L  L +HG+LHLLGYDH  +KD      LE  +++   + 
Sbjct: 90  KRGHSLLDELRLLFLHGYLHLLGYDH--EKDNGEQRALEEEMIQVFNLP 136


>gi|212692566|ref|ZP_03300694.1| hypothetical protein BACDOR_02063 [Bacteroides dorei DSM 17855]
 gi|237709119|ref|ZP_04539600.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724398|ref|ZP_04554879.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265752644|ref|ZP_06088213.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212664851|gb|EEB25423.1| hypothetical protein BACDOR_02063 [Bacteroides dorei DSM 17855]
 gi|229437267|gb|EEO47344.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229456815|gb|EEO62536.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263235830|gb|EEZ21325.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 138

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 58/137 (42%), Gaps = 9/137 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  + +    + +  + +      + + E++ +F    +I  +N +Y   D  T++
Sbjct: 7   DGVKMPDIKKKETTEWIKEVAA---CYGKRVGEIAYIFCSDDKILEVNQQYLQHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F     +         GD+ ++ + +   A    + ++  L  +IIHG LHL G +  
Sbjct: 64  ITFDYCEGNRIS------GDLFISLDTVRTNAEQFEQPYDRELHRVIIHGILHLCGINDK 117

Query: 144 DDKDACVMEGLERSILE 160
              +  +ME  E   L 
Sbjct: 118 GPGEREIMEAAENKALA 134


>gi|149919545|ref|ZP_01908025.1| hypothetical protein PPSIR1_10855 [Plesiocystis pacifica SIR-1]
 gi|149819670|gb|EDM79097.1| hypothetical protein PPSIR1_10855 [Plesiocystis pacifica SIR-1]
          Length = 166

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 8/121 (6%)

Query: 48  YFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLA 107
           +   E +  L +  TD   +  L+  Y G + PT+VLSF        G     LGD+VL 
Sbjct: 40  HIPPEELAVLGVRITDDEEMSALHLRYMGEEGPTDVLSF-------TGDGPGDLGDLVLD 92

Query: 108 YEIIEIEANVLGKEFE-NHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
           ++ IE +A         +    L++HG  HL G+DH D  +   M   ER +L  LG+  
Sbjct: 93  WQAIERQAAAPTDAARLDEATVLMVHGLAHLTGHDHRDRVEGRRMHLDERRVLRSLGVAS 152

Query: 167 P 167
           P
Sbjct: 153 P 153


>gi|108804346|ref|YP_644283.1| hypothetical protein Rxyl_1509 [Rubrobacter xylanophilus DSM 9941]
 gi|122381776|sp|Q1AVV7|RRMF_RUBXD RecName: Full=Probable rRNA maturation factor
 gi|108765589|gb|ABG04471.1| protein of unknown function UPF0054 [Rubrobacter xylanophilus DSM
           9941]
          Length = 135

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 16/113 (14%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAY 108
              E + ELS+   +   I  LN ++R  D PT+VLSF       DG    M+G+IV+  
Sbjct: 35  LDPERMGELSVALVEPEVIHDLNLKFRNKDAPTDVLSF-----EVDGPYGEMVGEIVICP 89

Query: 109 EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
              E++              L++HG LHL G DH ++ +A  M  +++ ++E 
Sbjct: 90  GCAEMDLEE-----------LVVHGALHLSGMDHGENFEASEMARVQKRVMEA 131


>gi|157273353|gb|ABV27252.1| conserved hypothetical protein [Candidatus Chloracidobacterium
           thermophilum]
          Length = 175

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 29/148 (19%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D   L  L +      +   ++         V+++LVF   + +  LN  YRG+D PT+V
Sbjct: 14  DRAGLAQLAQATLEAVLGPRLAAA-------VDVNLVFVGDNAMRRLNHIYRGVDAPTDV 66

Query: 84  LSFPTAFASSD--------------------GCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           LSF      S                          +LG++++A       A        
Sbjct: 67  LSFVHLELPSPYTHRRAQREAWFFSRPETGLDEEPPLLGEVIIATPTARRYAERHALTCA 126

Query: 124 NHLVHLIIHGFLHLLGYDHVDDKDACVM 151
             +  L+IHG +HL GYDH  D  A  M
Sbjct: 127 EEIQRLVIHGIIHLCGYDHETD--AGQM 152


>gi|256820953|ref|YP_003142232.1| hypothetical protein Coch_2127 [Capnocytophaga ochracea DSM 7271]
 gi|256582536|gb|ACU93671.1| protein of unknown function UPF0054 [Capnocytophaga ochracea DSM
           7271]
          Length = 139

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 56/130 (43%), Gaps = 9/130 (6%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
             +    + V  +        + +  ++ +F D   +  +N EY   D  T++++F  + 
Sbjct: 14  FKKNEVKRWVKRVAQSE---GKEVGNINYIFCDDEYLHKINVEYLQHDTLTDIITFDYSE 70

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                   ++  DI ++ E ++  AN+    F+  L+ ++ HG LHL GY     +D+ +
Sbjct: 71  ------GKVLHSDIYISVERVKENANIFKVPFQRELLRVLAHGLLHLCGYKDKTPEDSAL 124

Query: 151 MEGLERSILE 160
           M   E   + 
Sbjct: 125 MRNKEEEKMN 134


>gi|169794645|ref|YP_001712438.1| hypothetical protein ABAYE0460 [Acinetobacter baumannii AYE]
 gi|213157984|ref|YP_002320782.1| hypothetical protein AB57_3479 [Acinetobacter baumannii AB0057]
 gi|215482234|ref|YP_002324416.1| Uncharacterized protein family UPF0054 family protein
           [Acinetobacter baumannii AB307-0294]
 gi|301345375|ref|ZP_07226116.1| hypothetical protein AbauAB0_04004 [Acinetobacter baumannii AB056]
 gi|301511253|ref|ZP_07236490.1| hypothetical protein AbauAB05_06733 [Acinetobacter baumannii AB058]
 gi|301595635|ref|ZP_07240643.1| hypothetical protein AbauAB059_07482 [Acinetobacter baumannii
           AB059]
 gi|332855634|ref|ZP_08435977.1| translation metalloprotein YbeY [Acinetobacter baumannii 6013150]
 gi|332868553|ref|ZP_08438219.1| translation metalloprotein YbeY [Acinetobacter baumannii 6013113]
 gi|226703838|sp|B7I9D7|RRMF_ACIB5 RecName: Full=Probable rRNA maturation factor
 gi|226707624|sp|B7GW53|RRMF_ACIB3 RecName: Full=Probable rRNA maturation factor
 gi|238688043|sp|B0V6T5|RRMF_ACIBY RecName: Full=Probable rRNA maturation factor
 gi|169147572|emb|CAM85433.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|213057144|gb|ACJ42046.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
 gi|213989001|gb|ACJ59300.1| Uncharacterized protein family UPF0054 family protein
           [Acinetobacter baumannii AB307-0294]
 gi|332727349|gb|EGJ58785.1| translation metalloprotein YbeY [Acinetobacter baumannii 6013150]
 gi|332733323|gb|EGJ64516.1| translation metalloprotein YbeY [Acinetobacter baumannii 6013113]
          Length = 158

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +   +   +   E+ +   D      L
Sbjct: 1   MKISLSLQQDFRSPELELK---RAQLKKIIETTLR--HVGYKEDCEIGIACVDLEESHQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +L LGD+V+   ++  EA    K  +NH  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAH 115

Query: 129 LIIHGFLHLLGYDHV---DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LHLLGYDH    +D +     GLE  IL  L I +PY+
Sbjct: 116 LLVHGVLHLLGYDHETSDEDAEEME--GLEIEILAKLNIANPYQ 157


>gi|326798706|ref|YP_004316525.1| metalloprotease ybeY [Sphingobacterium sp. 21]
 gi|326549470|gb|ADZ77855.1| metalloprotease ybeY [Sphingobacterium sp. 21]
          Length = 144

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 8/141 (5%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + +EI      +++  + + + I+          E+S +F     +  +N EY   D  
Sbjct: 8   FFTEEIKYTIKNKLLLKQWIKDAITNEGL---KPGEISFIFCSDEYLHKINVEYLNHDTY 64

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T++++F  +   +     ++ GDI ++ + I+  A     +  + L  +IIHG LHL GY
Sbjct: 65  TDIITFDNSEDEN-----VIAGDIFISIDRIKENAKSFLVKEVDELHRVIIHGILHLCGY 119

Query: 141 DHVDDKDACVMEGLERSILED 161
                 D   M   E   L  
Sbjct: 120 LDKKPVDKKRMTEKENEYLSK 140


>gi|54020099|ref|YP_115737.1| hypothetical protein mhp224 [Mycoplasma hyopneumoniae 232]
 gi|71893510|ref|YP_278956.1| hypothetical protein MHJ_0154 [Mycoplasma hyopneumoniae J]
 gi|72080497|ref|YP_287555.1| hypothetical protein MHP7448_0158 [Mycoplasma hyopneumoniae 7448]
 gi|62901248|sp|Q601H8|RRMF_MYCH2 RecName: Full=Probable rRNA maturation factor
 gi|123645188|sp|Q4A8K7|RRMF_MYCH7 RecName: Full=Probable rRNA maturation factor
 gi|123645909|sp|Q4AAH6|RRMF_MYCHJ RecName: Full=Probable rRNA maturation factor
 gi|53987272|gb|AAV27473.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
 gi|71851637|gb|AAZ44245.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
 gi|71913621|gb|AAZ53532.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
          Length = 150

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
            +F K    L+ K     E  + L L+     + + L  +++ I+   +VLSFP+    +
Sbjct: 19  KLFRKIFKLLVEKEQITGE--ISLDLMLITQRKAQKLAIKFKNINYIPDVLSFPSNLIIA 76

Query: 94  DGCSSLM-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                L  LG+I +    I  +AN  G   E    +L +H   HLLG+DH D+K   +M+
Sbjct: 77  KKNFRLHFLGEIFMTPAKIIKQANEYGHSEEREFSYLFVHSIYHLLGFDHQDEKTNKLMD 136

Query: 153 GLERSILEDLGIN 165
               +IL +LGIN
Sbjct: 137 EKVENILINLGIN 149


>gi|228470093|ref|ZP_04055002.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228308231|gb|EEK17086.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 150

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E++  +TD   I   N  +   D  T+V++FP    S       + GDI+++ + +   A
Sbjct: 14  EINFQYTDDEGILKANRAFLQHDYYTDVITFPRE--SEQEGDDAIYGDILISIDTVATNA 71

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             LG  F+  L  ++IHG LHLLG D     +  +M   E   L  L
Sbjct: 72  QELGVPFKQELYRVMIHGILHLLGIDDQTQSERELMRMAEDRALMQL 118


>gi|218131741|ref|ZP_03460545.1| hypothetical protein BACEGG_03362 [Bacteroides eggerthii DSM 20697]
 gi|317474643|ref|ZP_07933917.1| hypothetical protein HMPREF1016_00896 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217986044|gb|EEC52383.1| hypothetical protein BACEGG_03362 [Bacteroides eggerthii DSM 20697]
 gi|316909324|gb|EFV31004.1| hypothetical protein HMPREF1016_00896 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 137

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           +   D I +  + +    + +  + +     ++ I E++ +F    +I  +N +Y   D 
Sbjct: 3   SYQADGIKMPAIKKRETTEWIKAVAAT---YEKRIGEIAYIFCSDEKILEVNRQYLQHDY 59

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG-KEFENHLVHLIIHGFLHLL 138
            T++++F           + + GD+ ++ + +   A      ++E  L  +IIHG LHL 
Sbjct: 60  YTDIITFDYCE------GNRLSGDLFISLDTVRTNAEQFAGNDYERELHRVIIHGILHLC 113

Query: 139 GYDHVDDKDACVMEGLERSILE 160
           G +     +  +ME  E   L 
Sbjct: 114 GINDKGPGEREIMEAAENKALA 135


>gi|149199105|ref|ZP_01876145.1| hypothetical protein LNTAR_24389 [Lentisphaera araneosa HTCC2155]
 gi|149137894|gb|EDM26307.1| hypothetical protein LNTAR_24389 [Lentisphaera araneosa HTCC2155]
          Length = 160

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 4/146 (2%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N     +    TL E    + ++  +   + + +    L++ FTD   IE +N ++   +
Sbjct: 2   NISIQSDTDKYTLAETKHIEDIALYLCDHWGLSKKHCSLNISFTDDAGIEPVNVQFLQHE 61

Query: 79  KPTNVLSFPT----AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
             T+V+SF          +D     +LG+++++ E  + +A      F +  +  + HG 
Sbjct: 62  GATDVISFDYLDDYEEEFADEDDPFVLGELLISLETAQSQAQTYDSSFNDEALLYVAHGI 121

Query: 135 LHLLGYDHVDDKDACVMEGLERSILE 160
           LHL G+D   + D   M   E   ++
Sbjct: 122 LHLCGFDDHQEDDIKAMRDAEAQSMK 147


>gi|260061291|ref|YP_003194371.1| hypothetical protein RB2501_06820 [Robiginitalea biformata
           HTCC2501]
 gi|88785423|gb|EAR16592.1| hypothetical protein RB2501_06820 [Robiginitalea biformata
           HTCC2501]
          Length = 140

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 9/139 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
            E          + + + N++           EL  VF     +  +N +Y G D  T++
Sbjct: 7   SETDFSLPNPAKYTEWIINVLKSRELTP---GELQFVFCSDDYLLEMNHKYLGHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           L+F       +     + GDI ++ + I   A      FE  L  ++IHG LHL+G+   
Sbjct: 64  LTF------ENDLEDGVSGDIFISIDRIRDNAKTYCVPFEEELARVMIHGVLHLIGFGDS 117

Query: 144 DDKDACVMEGLERSILEDL 162
            +K+  +M   E + L   
Sbjct: 118 TEKEKEIMRQEESACLRMF 136


>gi|198274088|ref|ZP_03206620.1| hypothetical protein BACPLE_00225 [Bacteroides plebeius DSM 17135]
 gi|198273166|gb|EDY97435.1| hypothetical protein BACPLE_00225 [Bacteroides plebeius DSM 17135]
          Length = 140

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 12/133 (9%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           ++      + KAV+          + + E++ +F    +I  +N +Y   D  T++++F 
Sbjct: 14  IKKRETTAWIKAVAET------YGKKVGEIAYIFCSDEKILEVNRQYLQHDYYTDIITFD 67

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                       + GD+ ++ + +   A      +E  L  +IIHG LHL G +     +
Sbjct: 68  YCE------GKKLSGDLFISLDTVRTNAEQFDAAYETELYRVIIHGILHLCGINDKGPGE 121

Query: 148 ACVMEGLERSILE 160
             +ME  E   LE
Sbjct: 122 REIMEAAENKALE 134


>gi|253568963|ref|ZP_04846373.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251840982|gb|EES69063.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 137

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +    + + N+ +      + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 10  VKMPDIKKRETTEWIKNVAAS---YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 66

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F             + GD+ ++ + I   A   G  +++ L  +IIHG LHL G +    
Sbjct: 67  FDYCEGD------RLSGDLFISLDTIRTNAEQFGAAYDDELHRVIIHGILHLCGINDKGP 120

Query: 146 KDACVMEGLERSILE 160
            +  +ME  E   L 
Sbjct: 121 GEREIMEEAENKALA 135


>gi|213962456|ref|ZP_03390718.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
 gi|213954782|gb|EEB66102.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
          Length = 139

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++ +F D   +  +N EY   D  T++++F            ++  DI ++ E ++  A 
Sbjct: 37  INYIFCDDEYLHKINVEYLQHDTLTDIITFDYTE------EKVLHSDIYISVERVKENAE 90

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +    F+  L+ ++ HG LHL GY     KD+ +M   E  ++
Sbjct: 91  IFKVPFQRELLRVLAHGLLHLCGYKDKTPKDSALMRQKEEEMM 133


>gi|167764038|ref|ZP_02436165.1| hypothetical protein BACSTE_02421 [Bacteroides stercoris ATCC
           43183]
 gi|167698154|gb|EDS14733.1| hypothetical protein BACSTE_02421 [Bacteroides stercoris ATCC
           43183]
          Length = 137

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 59/138 (42%), Gaps = 10/138 (7%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D I +  + +    + +  + +      + I E++ +F    +I  +N +Y   D  T++
Sbjct: 7   DGIEMPAIKKRETTEWIKAVAAT---YNKRIGEIAYIFCSDEKILEVNRQYLQHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG-KEFENHLVHLIIHGFLHLLGYDH 142
           ++F           + + GD+ ++ + +   A      ++E  L  +IIHG LHL G + 
Sbjct: 64  ITFDYCE------GNRLSGDLFISLDTVRTNAEQFAGNDYERELYRVIIHGILHLCGIND 117

Query: 143 VDDKDACVMEGLERSILE 160
               +  +ME  E   L 
Sbjct: 118 KGPGEREIMEAAENKALA 135


>gi|333029485|ref|ZP_08457546.1| metalloprotease ybeY [Bacteroides coprosuis DSM 18011]
 gi|332740082|gb|EGJ70564.1| metalloprotease ybeY [Bacteroides coprosuis DSM 18011]
          Length = 159

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 57/134 (42%), Gaps = 9/134 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + E +  + +  + +K    +    E++ +F    +I  +N  Y   D  T++++
Sbjct: 23  VEMPIINEKLIQEWIKEVATK---YQRRAGEIAYIFCSDEKILEVNRTYLQHDYYTDIIT 79

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F           +++ GD+ ++ + ++  +      +   L   IIHG LHL G +    
Sbjct: 80  FDYC------KGNIISGDLFISLDTVKTNSEQFNTPYNEELHRTIIHGILHLCGINDKGP 133

Query: 146 KDACVMEGLERSIL 159
            +  +ME  E   L
Sbjct: 134 GEREIMEQAENEAL 147


>gi|317486292|ref|ZP_07945124.1| hypothetical protein HMPREF0179_02482 [Bilophila wadsworthia 3_1_6]
 gi|316922462|gb|EFV43716.1| hypothetical protein HMPREF0179_02482 [Bilophila wadsworthia 3_1_6]
          Length = 169

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 8/128 (6%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
            C     +A+S ++           EL LV      +   N  Y G   PTNVLSFP   
Sbjct: 36  FCRAELHRALSAMLRAA---GSGPAELDLVLVRDAGMADYNLRYMGCHGPTNVLSFPIDE 92

Query: 91  ---ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                 D    + LG +V + + +  E  + G++ E H + L+ HG  HL+GYDH  + D
Sbjct: 93  QIAGPEDEDVPVQLGSLVFSVDTLHRETLLYGQDPEEHCLRLLAHGLGHLVGYDHGPEMD 152

Query: 148 A--CVMEG 153
                M  
Sbjct: 153 ELCSEMLS 160


>gi|189183988|ref|YP_001937773.1| putative metalloprotease [Orientia tsutsugamushi str. Ikeda]
 gi|189180759|dbj|BAG40539.1| hypothetical protein OTT_1081 [Orientia tsutsugamushi str. Ikeda]
          Length = 167

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 11/160 (6%)

Query: 18  ENALWGD--EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           ++++W +  EI+L  + +++      N+ +K   V++   E++++ T+ H ++ LNF +R
Sbjct: 10  QHSIWRNHKEINLCYVKKIIKTTLYHNIFAKLQSVQQ--AEVAILLTNDHEMQNLNFTHR 67

Query: 76  GIDKPTNVLSFPTAFASSDGCSSL-------MLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            I+KPTNVLSFP         S+L        LGDI   Y  I  EA    K F NH  H
Sbjct: 68  KINKPTNVLSFPDQVLDWQNLSTLDIQDNYIYLGDIAFGYNTIAKEAVEQQKTFINHFTH 127

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L+IH  LHLLG+DH  D +A +ME LE ++L    I  PY
Sbjct: 128 LLIHAILHLLGFDHQHDSEAIIMEELEVNLLAKFSIASPY 167


>gi|86131105|ref|ZP_01049704.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85818516|gb|EAQ39676.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 135

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 7/137 (5%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIV-ELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           E +     E+V  + + + +      ++ IV EL+ +F D   +  +N ++   D  T++
Sbjct: 3   EFNSTNNFELVNPEQIISWLEVVISAEKKIVGELNYIFCDDAYLHKINVDFLDHDTFTDI 62

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +SF           +++ GD+ ++ E +E  A      F + L  +++HG LH  GY   
Sbjct: 63  ISFDYT------QGNVVSGDMYISVERVEENAQDFNCSFRDELSRVMVHGILHYCGYKDK 116

Query: 144 DDKDACVMEGLERSILE 160
             ++A +M   E + L 
Sbjct: 117 SIEEAKLMRSKENTYLA 133


>gi|307564806|ref|ZP_07627334.1| metalloprotein, YbeY family [Prevotella amnii CRIS 21A-A]
 gi|307346528|gb|EFN91837.1| metalloprotein, YbeY family [Prevotella amnii CRIS 21A-A]
          Length = 144

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 9/134 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + + + +K +  +     +      ++  +F +  +I  +N EY   D  T++++
Sbjct: 9   VKMPKIRKRLISKWIKAVAKSHGY---ETGDIGYMFVNDEKILQINNEYLKHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F    A++        GD+V++ + +   A +  K ++N L  +IIHG LHL G +    
Sbjct: 66  FDYDEANTIS------GDLVISIDTVRTNAELFKKTYQNELERVIIHGILHLCGINDKGP 119

Query: 146 KDACVMEGLERSIL 159
            +  +ME  E   L
Sbjct: 120 GEREIMEDNENKAL 133


>gi|293610873|ref|ZP_06693173.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827217|gb|EFF85582.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 158

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 12/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +   +   +   E+ +   D    + L
Sbjct: 1   MKISLSLQQDFQSPELELK---RAQLKKIIETTL--HHVGYKEDCEIGVACVDLDESQQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +L LGD+V+   ++  EA    K  +NH  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAH 115

Query: 129 LIIHGFLHLLGYDHV---DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LHLLGYDH    +D +     GLE  IL  + I +PY+
Sbjct: 116 LLVHGVLHLLGYDHETSDEDAEEME--GLEIEILAKINIANPYQ 157


>gi|29348692|ref|NP_812195.1| hypothetical protein BT_3283 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|62901447|sp|Q8A2M2|RRMF_BACTN RecName: Full=Probable rRNA maturation factor
 gi|29340597|gb|AAO78389.1| conserved hypothetical protein with conserved domain [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 137

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +    + + N+ +      + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 10  VKMPDIKKRETTEWIKNVAAS---YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 66

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F             + GD+ ++ + I   A   G  +++ L  +IIHG LHL G +    
Sbjct: 67  FDYCQGD------RLSGDLFISLDTIRTNAEQFGAAYDDELHRVIIHGILHLCGINDKGP 120

Query: 146 KDACVMEGLERSILE 160
            +  +ME  E   L 
Sbjct: 121 GEREIMEEAENKALA 135


>gi|311695359|gb|ADP98232.1| metalloprotease YbeY [marine bacterium HP15]
          Length = 115

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 18/123 (14%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +D Q   E      E  ++   ++ +               E+  E+++    +   + L
Sbjct: 1   MDFQQVFEAPGIPSETQVQKWAQLAWQ-------------GEDPSEVTVRIVGTEESQAL 47

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N +YRG D PTNVLSFP  F +  G +  + GD+V+   ++E EA    K+    L    
Sbjct: 48  NHQYRGRDYPTNVLSFP--FEAPAGITVPLAGDLVICAPVVEKEAMEQEKKPGRPLG--- 102

Query: 131 IHG 133
            HG
Sbjct: 103 AHG 105


>gi|329960651|ref|ZP_08298994.1| translation metalloprotein YbeY [Bacteroides fluxus YIT 12057]
 gi|328532524|gb|EGF59318.1| translation metalloprotein YbeY [Bacteroides fluxus YIT 12057]
          Length = 137

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 59/138 (42%), Gaps = 10/138 (7%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  L +    + +  + +      + I E++ +F    +I  +N +Y   D  T++
Sbjct: 7   DGVEMPVLKKRETTEWIKAVAAT---YGKRIGEIAYIFCSDEKILEVNRQYLQHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG-KEFENHLVHLIIHGFLHLLGYDH 142
           ++F           + + GD+ ++ + +   A      ++E  L  +IIHG LHL G + 
Sbjct: 64  ITFDYCE------GNRLSGDLFISLDTVRTNAEQFAGNDYERELYRVIIHGILHLCGIND 117

Query: 143 VDDKDACVMEGLERSILE 160
               +  +ME  E   L 
Sbjct: 118 KGPGEREIMEEAENKALA 135


>gi|163786964|ref|ZP_02181412.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|163789246|ref|ZP_02183688.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159875461|gb|EDP69523.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878824|gb|EDP72880.1| glutamyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 136

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 9/137 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E + +       +K +S  IS+         E++ +F     +  LN ++   D  T+++
Sbjct: 7   ETNFKLDNSEQISKWISKTISEENC---KEGEINYIFCSDEYLHRLNVDFLNHDTLTDII 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           SF  +          + GD+ ++ + ++  A      FE+ +  +IIHG LH  GY    
Sbjct: 64  SFDYS------VGKELHGDVYISVDRVKENAFEFKTAFEDEISRVIIHGVLHYCGYKDKS 117

Query: 145 DKDACVMEGLERSILED 161
           ++D  +M   E   L  
Sbjct: 118 EEDEMLMRLKEDYYLNK 134


>gi|329956354|ref|ZP_08296951.1| translation metalloprotein YbeY [Bacteroides clarus YIT 12056]
 gi|328524251|gb|EGF51321.1| translation metalloprotein YbeY [Bacteroides clarus YIT 12056]
          Length = 137

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 59/138 (42%), Gaps = 10/138 (7%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  + +    + +  + +     ++ + E++ +F    +I  +N  Y   D  T++
Sbjct: 7   DGVEMPAIKKRETTEWIKAVAAT---YEKRVGEIAYIFCSDEKILEVNRRYLQHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG-KEFENHLVHLIIHGFLHLLGYDH 142
           ++F           + + GD+ ++ + +   A      ++E  L  +IIHG LHL G + 
Sbjct: 64  ITFDYCE------GNRLSGDLFISLDTVRTNAEQFAGNDYERELYRVIIHGILHLCGIND 117

Query: 143 VDDKDACVMEGLERSILE 160
               +  +ME  E   L 
Sbjct: 118 KGPGEREIMEAAENKALA 135


>gi|124010286|ref|ZP_01694939.1| conserved hypothetical protein, putative [Microscilla marina ATCC
           23134]
 gi|123983671|gb|EAY24111.1| conserved hypothetical protein, putative [Microscilla marina ATCC
           23134]
          Length = 157

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 8/139 (5%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + ++       E    K V+ +  +  +       L+ +F +   +  +N EY   D  
Sbjct: 20  FFSEQTDFVLSKEAEAIKWVNLIAEQANYKING---LNYIFCNDAYLHQINVEYLDHDTY 76

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T++++F  +         L+ GDI ++ + I   A      F   L  ++ HG LHLLG+
Sbjct: 77  TDIITFDNSEEEQ-----LIEGDIFISIDRIRENAATYNASFAVELHRVMAHGLLHLLGF 131

Query: 141 DHVDDKDACVMEGLERSIL 159
               D +  +M   E   L
Sbjct: 132 GDKTDDEKLIMRTQEDKAL 150


>gi|315224153|ref|ZP_07865993.1| possible metal dependent hydrolase [Capnocytophaga ochracea F0287]
 gi|314945886|gb|EFS97895.1| possible metal dependent hydrolase [Capnocytophaga ochracea F0287]
          Length = 139

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 56/130 (43%), Gaps = 9/130 (6%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
             +    + V  +        + +  ++ +F D   +  +N EY   D  T++++F  + 
Sbjct: 14  FKKNEVKRWVKRVAQSE---GKEVGNINYIFCDDEYLHKINVEYLQHDTLTDIITFDYSE 70

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                   ++  DI ++ E ++  AN+    F+  L+ ++ HG LHL GY     +D+ +
Sbjct: 71  ------GKVLHSDIYISVERVKENANIFKVPFQKELLRVLAHGLLHLCGYKDKTPEDSAL 124

Query: 151 MEGLERSILE 160
           M   E   + 
Sbjct: 125 MRNKEEEKMN 134


>gi|163840663|ref|YP_001625068.1| putative metalloprotease [Renibacterium salmoninarum ATCC 33209]
 gi|189039400|sp|A9WQS5|RRMF_RENSM RecName: Full=Probable rRNA maturation factor
 gi|162954139|gb|ABY23654.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 157

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 15/165 (9%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +++  E+ +   E  L  L   VF K                 ELS++  D   +E L
Sbjct: 1   MSVEVNNESGVELPEAELVRLSRFVFEK----------LYLHPQTELSIILADREAMEKL 50

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD----GCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + E+      T+VLSFP              + +LGDIV+  ++ + +A   G   E+ L
Sbjct: 51  HVEWMYEPGATDVLSFPMDELRPGTVSRPAPAGLLGDIVICPQVAQEQAQAGGHSVEDEL 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDPYEV 170
           + L  HG LHLLGYDH D ++   M GL+R +L   LG + P E 
Sbjct: 111 LLLTTHGLLHLLGYDHEDPEEKAEMFGLQRELLTSFLGRDAPAET 155


>gi|303246548|ref|ZP_07332827.1| protein of unknown function UPF0054 [Desulfovibrio fructosovorans
           JJ]
 gi|302492258|gb|EFL52133.1| protein of unknown function UPF0054 [Desulfovibrio fructosovorans
           JJ]
          Length = 149

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           L       +  LN +Y G+  PTNVLSFP      D      LG++ ++ +    EA + 
Sbjct: 40  LRLVGDAEMARLNSDYLGLCGPTNVLSFPA----DDPDRPDYLGEMAVSRDTAAREAFLY 95

Query: 119 GKEFENHLVHLIIHGFLHLLGYDH 142
           G++   HL  L+ HGFLHL G+DH
Sbjct: 96  GQDPTEHLTRLLAHGFLHLAGFDH 119


>gi|126643046|ref|YP_001086030.1| hypothetical protein A1S_3031 [Acinetobacter baumannii ATCC 17978]
          Length = 110

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/108 (46%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 65  HRIETLNFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEF 122
                LN +YR  DKPTNVLSFP+           +L LGD+V+   ++  EA    K  
Sbjct: 2   EESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTA 61

Query: 123 ENHLVHLIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           +NH  HL++HG LHLLGYDH   D+DA  MEGLE  IL  L I +PY+
Sbjct: 62  QNHFAHLLVHGVLHLLGYDHETSDEDAEEMEGLEIEILAKLNIANPYQ 109


>gi|189464937|ref|ZP_03013722.1| hypothetical protein BACINT_01281 [Bacteroides intestinalis DSM
           17393]
 gi|189437211|gb|EDV06196.1| hypothetical protein BACINT_01281 [Bacteroides intestinalis DSM
           17393]
          Length = 136

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 60/137 (43%), Gaps = 9/137 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + +  + +    + +  + +     ++ + E++ +F    +I  +N  Y   D  T++
Sbjct: 7   DGVEMPAIKKSKTTEWIKAVAAT---YEKRVGEIAYIFCSDEKILEVNRHYLQHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F           + + GD+ ++ + +   A   G ++E  L  +IIHG LHL G +  
Sbjct: 64  ITFDYCE------GNRLSGDLFISLDTVRTNAEQFGSDYETELHRVIIHGILHLCGINDK 117

Query: 144 DDKDACVMEGLERSILE 160
              +  +ME  E   L 
Sbjct: 118 GPGEREIMEEAENRALA 134


>gi|160888660|ref|ZP_02069663.1| hypothetical protein BACUNI_01077 [Bacteroides uniformis ATCC 8492]
 gi|270295007|ref|ZP_06201208.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478000|ref|ZP_07937182.1| hypothetical protein HMPREF1007_00298 [Bacteroides sp. 4_1_36]
 gi|156861974|gb|EDO55405.1| hypothetical protein BACUNI_01077 [Bacteroides uniformis ATCC 8492]
 gi|270274254|gb|EFA20115.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905789|gb|EFV27561.1| hypothetical protein HMPREF1007_00298 [Bacteroides sp. 4_1_36]
          Length = 137

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 60/138 (43%), Gaps = 10/138 (7%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D + + ++ +    + + ++ +      + + E++ +F    +I  +N +Y   D  T++
Sbjct: 7   DGVEMPSIKKRETTEWIKSVAAT---YGKRVGEIAYIFCSDEKILEVNRQYLQHDYYTDI 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL-GKEFENHLVHLIIHGFLHLLGYDH 142
           ++F           + + GD+ ++ + +   A       +E  L  +IIHG LHL G + 
Sbjct: 64  ITFDYCE------GNRLSGDLFISLDTVRTNAEQFADNNYERELYRVIIHGILHLCGIND 117

Query: 143 VDDKDACVMEGLERSILE 160
               +  +ME  E   L 
Sbjct: 118 KGPGEREIMEEAENKALA 135


>gi|312601107|gb|ADQ90362.1| Putative metalloprotease [Mycoplasma hyopneumoniae 168]
          Length = 150

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
            +F K    L+ K     E  + L L+     + + L  +++ I+   +VLSFP+    +
Sbjct: 19  KLFRKIFKLLVEKEQITGE--ISLDLMLITQRKAQKLAIKFKSINYIPDVLSFPSNLIIA 76

Query: 94  DGCSSLM-LGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                L  LG+I +    I  +AN  G   E    +L +H   HLLG+DH D+K   +M+
Sbjct: 77  KKNFRLHFLGEIFMTPAKIIKQANEYGHSEEREFSYLFVHSIYHLLGFDHQDEKTNKLMD 136

Query: 153 GLERSILEDLGIN 165
               +IL +LGIN
Sbjct: 137 EKVENILINLGIN 149


>gi|319900528|ref|YP_004160256.1| hypothetical protein Bache_0647 [Bacteroides helcogenes P 36-108]
 gi|319415559|gb|ADV42670.1| protein of unknown function UPF0054 [Bacteroides helcogenes P
           36-108]
          Length = 138

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 57/136 (41%), Gaps = 10/136 (7%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  + +    + +  + +      +   E++ +F    +I  +N +Y   D  T++++
Sbjct: 9   VEMPAIKKRETTEWIKAVAAS---YGKKTGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 65

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG-KEFENHLVHLIIHGFLHLLGYDHVD 144
           F           + + GD+ ++ + +   A      ++E  L  +IIHG LHL G +   
Sbjct: 66  FDYCE------GNRLSGDLFISLDTVRTNAEQFAGNDYERELYRVIIHGILHLCGINDKG 119

Query: 145 DKDACVMEGLERSILE 160
             +  +ME  E   L 
Sbjct: 120 PGEREIMEEAENKALA 135


>gi|221120368|ref|XP_002165737.1| PREDICTED: similar to Putative metalloprotease C21orf57 [Hydra
           magnipapillata]
          Length = 159

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +L+    +   +   +LI+    +     ++ L+F   +++  LN+ +R ID+ T++LSF
Sbjct: 7   NLQKAAIINTWQVRKDLITLRNIMGLQSFDVGLLFLSKNKMRELNYAHRKIDEATDILSF 66

Query: 87  P------TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           P       A  S        LGDI L  ++I  + +V   E  +  V L+ HG +HL GY
Sbjct: 67  PFHQSLTNADISKMNLEEKNLGDIFLCPQLIRRKYDVHDFELRSVFVPLLTHGLVHLCGY 126

Query: 141 DHVDDKDACVMEGLERSILEDL 162
            H  ++   +M   E  IL+  
Sbjct: 127 AHETEEQYELMHAKELEILKRF 148


>gi|283853555|ref|ZP_06370794.1| protein of unknown function UPF0054 [Desulfovibrio sp. FW1012B]
 gi|283571054|gb|EFC19075.1| protein of unknown function UPF0054 [Desulfovibrio sp. FW1012B]
          Length = 143

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E  L       +  LN +Y G+  PTNVLSFP      D      LG++ ++ + +  EA
Sbjct: 37  EYDLRLVGDGEMAALNRDYLGLVGPTNVLSFPA----DDPGRPEYLGEMAVSLDTVAREA 92

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
            + G+E   HL  L+ HGFLHL G DH       VME L    +E 
Sbjct: 93  FLYGQEPATHLARLLAHGFLHLAGLDHGP-----VMEALTEQAVEA 133


>gi|282891330|ref|ZP_06299832.1| hypothetical protein pah_c050o119 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498827|gb|EFB41144.1| hypothetical protein pah_c050o119 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 152

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D+  +  L +    K V  +I   +   E   E+ + F    ++  L+ +Y     PT+ 
Sbjct: 7   DQQKVLKLPKTSIKKIVQEVI---HLENELCHEVIIHFISDKKMRELHAQYFNDPSPTDC 63

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +SFP      +     +LG+I +  E         G +         IHG LHL+GYD +
Sbjct: 64  ISFP--LDGPEETHYRVLGEIFVCPETAVKYTEQHGGDPYTETALYTIHGLLHLMGYDDI 121

Query: 144 DDKDACVMEGLERSILEDL 162
              D   M   E+  LE L
Sbjct: 122 KKTDQKAMRAAEKKHLEHL 140


>gi|257471496|ref|ZP_05635495.1| hypothetical protein BaphL_02205 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|311086173|gb|ADP66255.1| hypothetical protein CWO_02330 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086746|gb|ADP66827.1| hypothetical protein CWQ_02365 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087334|gb|ADP67414.1| hypothetical protein CWS_02310 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087838|gb|ADP67917.1| hypothetical protein CWU_02885 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 88

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +SFP  F      +  +LGD+VL   IIE E+    K  E+H  H+ IHG LHLLGYDH 
Sbjct: 1   MSFP--FNKFIKINYKLLGDLVLCKNIIEKESLKYNKSLESHWAHITIHGTLHLLGYDHQ 58

Query: 144 DDKDACVMEGLERSILEDLGINDPY 168
           ++K+A +ME LE  I+  L    P+
Sbjct: 59  NNKEADIMERLENKIMLSLNYKKPH 83


>gi|217077477|ref|YP_002335195.1| hypothetical protein THA_1410 [Thermosipho africanus TCF52B]
 gi|226734149|sp|B7ICX7|RRMF_THEAB RecName: Full=Probable rRNA maturation factor
 gi|217037332|gb|ACJ75854.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
          Length = 134

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
             V ++LVF D   IE LN +YR I+ PT+VL+F             +  +I +  ++I+
Sbjct: 26  KDVNVNLVFIDKGEIERLNNQYRNINAPTDVLTFVYGDDD-------LYAEIFVCEDVIK 78

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD-KDACVMEGLERSILEDLGIND 166
             A      FE  L+ ++IH  LH+ GYDH  D  +A  M   +   L+   +++
Sbjct: 79  ENAEKFYNTFEKELLTVLIHAALHVAGYDHEYDTTNAKEMFQKQEEYLKKYDVDN 133


>gi|326335988|ref|ZP_08202165.1| metal dependent hydrolase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691952|gb|EGD33914.1| metal dependent hydrolase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 138

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 9/128 (7%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           E  + + V  +I+     ++   +++ +F +   +  +N +Y   D  T++++F      
Sbjct: 16  EADYQRWVQLIIASE---RKKEGDINYIFCNDEYLHKINVDYLQHDTLTDIITFDY---- 68

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
             G  + +  DI ++ E ++  A   G +    L+ ++ HG LHL GY     + +  M 
Sbjct: 69  --GKDNTLSSDIYISVERVKENAQEYGVDLPTELLRVMAHGILHLCGYKDKTPEQSQEMR 126

Query: 153 GLERSILE 160
             E   + 
Sbjct: 127 QKEEEKMA 134


>gi|228471545|ref|ZP_04056320.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228277121|gb|EEK15801.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 138

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 9/129 (6%)

Query: 32  CEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
            E  F + +  +I+     ++   +++ +F +   +  +N +Y   D  T++++F     
Sbjct: 15  DEEDFQRWIQLIIASE---RKKEGDINYIFCNDEYLHKINVDYLQHDTLTDIITFDY--- 68

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
              G  +L+  DI ++ E +   A   G +F   L+ ++ HG LHL GY     + +  M
Sbjct: 69  ---GKDNLLASDIYISIERVRENAQEFGVDFSTELLRVMSHGILHLCGYKDKTPEQSQQM 125

Query: 152 EGLERSILE 160
              E   + 
Sbjct: 126 RQKEEEKMA 134


>gi|120437624|ref|YP_863310.1| hypothetical protein GFO_3300 [Gramella forsetii KT0803]
 gi|145558812|sp|A0M6J8|RRMF_GRAFK RecName: Full=Probable rRNA maturation factor
 gi|117579774|emb|CAL68243.1| protein belonging to UPF0054 [Gramella forsetii KT0803]
          Length = 143

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 9/134 (6%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
            E       E  +   +   I       + I ++S +F D   +  +N EY   D  T++
Sbjct: 10  SENDFVLNREQDYRNWIEKAIESEN---KYIGDISFIFCDDEYLHKINLEYLAHDTYTDI 66

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           +SF       +   + + GDI ++ E ++  AN    EF+  L  ++IHG LH  G+   
Sbjct: 67  ISF------DNTLGNTLQGDIYISTERVQENANSFNTEFDEELKRVLIHGILHFCGFKDK 120

Query: 144 DDKDACVMEGLERS 157
            +++  +M   E  
Sbjct: 121 TEREQELMRRKEEE 134


>gi|145219509|ref|YP_001130218.1| hypothetical protein Cvib_0701 [Prosthecochloris vibrioformis DSM
           265]
 gi|189040581|sp|A4SE07|RRMF_PROVI RecName: Full=Probable rRNA maturation factor
 gi|145205673|gb|ABP36716.1| protein of unknown function UPF0054 [Chlorobium phaeovibrioides DSM
           265]
          Length = 148

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 9/135 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L E    KAV  ++S+        V +  ++     +  +N E+ G D  T+ ++FP 
Sbjct: 11  RALPEAKLKKAVRLVLSEEGG---KAVSIDAIYCGGRMMRRINREFLGHDYDTDTVTFPY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +         ++ G+  ++ + +   A      FE  L+ + IH  LHLLGYD    ++ 
Sbjct: 68  SE------GLVVEGEFYVSLDEVGRNAVRFKSGFEQELLRVTIHSVLHLLGYDDASPEER 121

Query: 149 CVMEGLERSILEDLG 163
             M   E   L  LG
Sbjct: 122 GRMRQKEDRYLRILG 136


>gi|326403549|ref|YP_004283631.1| putative metalloprotease [Acidiphilium multivorum AIU301]
 gi|325050411|dbj|BAJ80749.1| putative metalloprotease [Acidiphilium multivorum AIU301]
          Length = 150

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 12/111 (10%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++  D+  ++ LN   RG +KPTNVL++                +I+LA  ++  EA   
Sbjct: 49  VILADNRTVKALNARDRGRNKPTNVLTYEMPP------------EIILALGVVLREARAA 96

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            +   +HL HL++HG LHL G DH +  +A  ME LE  +L  LG+ +P++
Sbjct: 97  RRRPAHHLAHLVVHGALHLAGEDHHEAGEARRMERLETRLLHRLGVPNPWK 147


>gi|269792677|ref|YP_003317581.1| hypothetical protein Taci_1067 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100312|gb|ACZ19299.1| protein of unknown function UPF0054 [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 150

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENI--VELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
              L E +       L      +   +  VE+SL F +   +  +N +YR +D  T+VLS
Sbjct: 11  FEDLKETLEGAWERFLREHRSLIPHQVEGVEVSLSFVEPEAMREVNLKYRQVDSSTDVLS 70

Query: 86  FPTAFASSDGCSS-----LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           FP                L LGD+++  + +E        +    ++ +I HGFLHLLG+
Sbjct: 71  FPLWEEDGRFSPPVGWRWLPLGDVLVCVQDVEPLGE---GDRARGVLLVIHHGFLHLLGF 127

Query: 141 DHVDDKDACVMEGLERSIL 159
           DH D++    M  L+  ++
Sbjct: 128 DHGDEEQRREMWLLQDELM 146


>gi|281341183|gb|EFB16767.1| hypothetical protein PANDA_007691 [Ailuropoda melanoleuca]
          Length = 137

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP             D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRMYREKNIPTDVLSFPFHENIKAGELPQPDFQDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
           L  E I  +     +++ + L     HG  HLLG+ H  + +   
Sbjct: 93  LGVEYIFQQCR-GHEDYYDILTVTATHGLCHLLGFTHSTEAEWQK 136


>gi|148284177|ref|YP_001248267.1| putative metalloprotease [Orientia tsutsugamushi str. Boryong]
 gi|146739616|emb|CAM79399.1| putative metal-dependent hydrolase [Orientia tsutsugamushi str.
           Boryong]
          Length = 167

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 11/160 (6%)

Query: 18  ENALWGD--EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYR 75
           ++ +W +  EI+L  + +++      N+ +K   V++   E+ ++ T+ H ++ LNF +R
Sbjct: 10  QHPIWNNHNEINLCYVKKIIKTTLCHNVFAKLQLVQQ--AEVVILLTNDHEMQNLNFTHR 67

Query: 76  GIDKPTNVLSFPTAFASSDGCSSL-------MLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            I+KPTNVLSFP         S+L        LGDI   Y  I  EA    K F NH  H
Sbjct: 68  KINKPTNVLSFPDQVLDWQNLSTLDIQDNYIYLGDIAFGYNSISKEAVEQQKTFINHFTH 127

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPY 168
           L+IH  LHLLG+DH  D +A +ME LE ++L    I  PY
Sbjct: 128 LLIHAILHLLGFDHQHDSEAIIMEELEVNLLAKFSIASPY 167


>gi|253582281|ref|ZP_04859504.1| metal-binding protein [Fusobacterium varium ATCC 27725]
 gi|251835820|gb|EES64358.1| metal-binding protein [Fusobacterium varium ATCC 27725]
          Length = 155

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 15/161 (9%)

Query: 11  LDL--QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           +DL   I++E   +   I+     E    K +   + +  F  +  V LSL+FT +  I+
Sbjct: 1   MDLVVDISLEIEGYSSLIN-----EEEMKKYIKEAL-ESEFESDRPVYLSLLFTGNEEIQ 54

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGKEFENHLV 127
            +N +YRG D+PT+V+SF               LGDIV++ E +E +A       +  L 
Sbjct: 55  VINKQYRGKDQPTDVISFAYHETEDFDIGPYDTLGDIVISMERVEEQAAEYNHSPKRELY 114

Query: 128 HLIIHGFLHLLGYDHVDDKDAC---VMEGLERSILEDLGIN 165
           +++ HG LHLLGYDH+++ D          E  IL   G  
Sbjct: 115 YVLTHGLLHLLGYDHIEEDDKKEMR---AREEEILGQFGYT 152


>gi|258593723|emb|CBE70064.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 146

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           +  E  LV      I  LN +YRG    T+VLSFP    S    S  +LGD+V++ E  +
Sbjct: 31  DQAECGLVLVGDRTIARLNRQYRGKATSTDVLSFPMREGSFASLSPHLLGDVVISAETAD 90

Query: 113 IEANVLGKEFENHLV-----------HLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
            +A   G+   + L                        YDH    +A  M+ LER 
Sbjct: 91  RQAKAAGRTLRDELTALLIHGILHLLG-----------YDHQMPSEARRMKRLERQ 135


>gi|256828058|ref|YP_003156786.1| hypothetical protein Dbac_0243 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577234|gb|ACU88370.1| protein of unknown function UPF0054 [Desulfomicrobium baculatum DSM
           4028]
          Length = 146

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 8/96 (8%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
           +  +LSL   D   +  LN +Y G   PTNVLSFP             LGD+VL+ E + 
Sbjct: 35  DEWQLSLRIVDDREMAELNGQYMGCLGPTNVLSFPGDED--------WLGDLVLSAETLV 86

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            E  +  ++   + V L+ HG LHL+G+DH  + +A
Sbjct: 87  RECRLYNQDPHEYTVRLLAHGLLHLMGHDHGPEMEA 122


>gi|298387060|ref|ZP_06996614.1| metalloprotease [Bacteroides sp. 1_1_14]
 gi|298260210|gb|EFI03080.1| metalloprotease [Bacteroides sp. 1_1_14]
          Length = 137

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           I +  + +    + + N+ +      + + E++ +F    +I  +N +Y   D  T++++
Sbjct: 10  IKMPDIKKRETTEWIKNVAAS---YGKRLGEIAYIFCSDEKILEVNRQYLQHDYYTDIIT 66

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F             + GD+ ++ + I   A   G  +++ L  +IIHG LHL G +    
Sbjct: 67  FDYCQGD------RLSGDLFISLDTIRTNAEQFGAAYDDELHRVIIHGILHLCGINDKGL 120

Query: 146 KDACVMEGLERSILE 160
            +  +ME  E   L 
Sbjct: 121 GEREIMEEAENKALA 135


>gi|169632397|ref|YP_001706133.1| hypothetical protein ABSDF0477 [Acinetobacter baumannii SDF]
 gi|238688242|sp|B0VQX0|RRMF_ACIBS RecName: Full=Probable rRNA maturation factor
 gi|169151189|emb|CAO99866.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 158

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 12/164 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + ++++      E+ L+        K +   +   +   +   E+ +   D      L
Sbjct: 1   MKISLSLQQDFQSPELELK---RAQLKKIIETTLR--HVGYKEDCEIGIACVDLEESHQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTN LSFP+           +L LGD+V+   ++  EA    K  +NH  H
Sbjct: 56  NLQYREKDKPTNALSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAH 115

Query: 129 LIIHGFLHLLGYDHV---DDKDACVMEGLERSILEDLGINDPYE 169
           L++HG LHLLGYDH    +D +     GLE  IL  L I +PY+
Sbjct: 116 LLVHGVLHLLGYDHETSDEDAEEME--GLEIEILAKLNIANPYQ 157


>gi|311745076|ref|ZP_07718861.1| putative metalloprotease [Algoriphagus sp. PR1]
 gi|126577589|gb|EAZ81809.1| putative metalloprotease [Algoriphagus sp. PR1]
          Length = 141

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 8/136 (5%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + +E + +   ++   K +  + S+  F   NI EL+ +F     +  +N EY   D  
Sbjct: 5   FFQEETNFQLKQKLNRKKWLRKIASEEGF---NISELNYIFCSDEYLYNINVEYLDHDTY 61

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T++++F  +          + GDI ++ + ++  +N LG   ++ L  +I HG  HL+GY
Sbjct: 62  TDIITFDNSEEEQ-----TIEGDIFISIDRVQENSNKLGATLQDELSRVISHGLFHLMGY 116

Query: 141 DHVDDKDACVMEGLER 156
              D  +A  M   E 
Sbjct: 117 KDKDKNEAEEMRNKEE 132


>gi|91762483|ref|ZP_01264448.1| hypothetical protein PU1002_04421 [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718285|gb|EAS84935.1| hypothetical protein PU1002_04421 [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 153

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 5/149 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + +  E ALW  +I         F  ++     K Y      + L+++ +++  I+ 
Sbjct: 1   MIKIDVVSECALWSKKIKRNK----TFFNSILKFFPKKYKFIGKKINLTILLSNNKNIKK 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN ++R  +KPT+VLSFP      +   S  LGDIV++YE +    N+   EF+  +V +
Sbjct: 57  LNKDFRNKNKPTDVLSFPFE-KKFNPKKSNYLGDIVISYEFMNKPKNISILEFKQKVVKI 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSI 158
            IHGFLHLLG+DH+  KD   M   E  I
Sbjct: 116 FIHGFLHLLGHDHIKLKDFKKMIKEEDLI 144


>gi|323457282|gb|EGB13148.1| hypothetical protein AURANDRAFT_18863 [Aureococcus anophagefferens]
          Length = 213

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 27/137 (19%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSS----------LMLG 102
           +  ++ +  T    I   N  +RG+ K T++LSFP     + G             L LG
Sbjct: 69  SEFDVGIWLTTDATIRKYNTRFRGMRKSTDILSFPFHDELAPGALPDAVDRDDEDDLNLG 128

Query: 103 DIVLAYEIIEIEANV---LGK--------------EFENHLVHLIIHGFLHLLGYDHVDD 145
           D+V++   +   A                      + E  +  L++HG  HLL YDH  D
Sbjct: 129 DMVVSVPYVRRRAEKDGGRDHAPGRGVAAAMAPVADVEERIHMLLVHGLCHLLNYDHETD 188

Query: 146 KDACVMEGLERSILEDL 162
            +   M  LE  +LE  
Sbjct: 189 DEFEDMVALEDELLETY 205


>gi|148260358|ref|YP_001234485.1| hypothetical protein Acry_1355 [Acidiphilium cryptum JF-5]
 gi|146402039|gb|ABQ30566.1| protein of unknown function UPF0054 [Acidiphilium cryptum JF-5]
          Length = 150

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 12/111 (10%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++  D+  ++ LN   RG +KPTNVL++                +I+LA  ++  EA   
Sbjct: 49  VILADNRTVKALNARDRGRNKPTNVLTYEMPP------------EIILALGVVLREARAA 96

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYE 169
            +   +HL HL++HG LHL G DH +  +A  ME LE  +L  LG+ +P++
Sbjct: 97  RRRPAHHLAHLVVHGALHLAGEDHHEAGEARRMERLEARLLHRLGVPNPWK 147


>gi|262280176|ref|ZP_06057960.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257954|gb|EEY76688.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 160

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 8/162 (4%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + + ++      E+ L+        K +   +   +       E+ +   D    + L
Sbjct: 1   MKISLTLQQDFLSPELELK---RAQLKKIIETTLR--HVGYNEDCEIGVACVDLAESQQL 55

Query: 71  NFEYRGIDKPTNVLSFPTAFASS--DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           N +YR  DKPTNVLSFP+           +  LGD+V+   ++  EA    K  + H  H
Sbjct: 56  NLQYREKDKPTNVLSFPSDIPEEVLPMLDAFPLGDLVICIPVVLQEAVEQKKTAQEHFAH 115

Query: 129 LIIHGFLHLLGYDHVD-DKDACVMEGLERSILEDLGINDPYE 169
           L++HG LHLLGYDH   D++A  MEGLE  IL  L I++PY+
Sbjct: 116 LLVHGVLHLLGYDHETSDEEAEEMEGLEVEILAKLNIDNPYQ 157


>gi|110639867|ref|YP_680077.1| hypothetical protein CHU_3501 [Cytophaga hutchinsonii ATCC 33406]
 gi|123354224|sp|Q11PC9|RRMF_CYTH3 RecName: Full=Probable rRNA maturation factor
 gi|110282548|gb|ABG60734.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 143

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 7/142 (4%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E   +  E     L +    +   N I+K    K +I+EL+ +F     +  +N ++   
Sbjct: 4   ETIFFFKEDTQYQLRQRAEIRTWLNTIAKKE--KYSILELNYIFCSDEYLLQMNRDFLDH 61

Query: 78  DKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
           D  T++++F      +      + GDI ++ + ++  A +     ++ L  ++ HG LHL
Sbjct: 62  DYYTDIITF-----DNSEVKGKIEGDIFISIDRVKDNAQLQHSTVKDELHRVLAHGLLHL 116

Query: 138 LGYDHVDDKDACVMEGLERSIL 159
            GY     K+  +M   E + L
Sbjct: 117 TGYKDKTTKEKEMMRAKEDASL 138


>gi|196234338|ref|ZP_03133167.1| protein of unknown function UPF0054 [Chthoniobacter flavus
           Ellin428]
 gi|196221605|gb|EDY16146.1| protein of unknown function UPF0054 [Chthoniobacter flavus
           Ellin428]
          Length = 146

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 14/134 (10%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP 87
           LR L  +   + + +  + G F    + E+ +       IE ++  +      T+V++F 
Sbjct: 19  LRKLAPLALERCLEH-SADGRFALRQLEEVEVAIVTDRVIEDVHLRFLKTPGATDVITFE 77

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                         G+IV++ E     A     +    L   IIHG LHL GYD +   D
Sbjct: 78  Y-------------GEIVISAETAAAYARQYKHDVNRELGLYIIHGLLHLNGYDDLTPGD 124

Query: 148 ACVMEGLERSILED 161
           A +M   ++ ILE 
Sbjct: 125 AELMHRTQQDILEA 138


>gi|294054666|ref|YP_003548324.1| protein of unknown function UPF0054 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293613999|gb|ADE54154.1| protein of unknown function UPF0054 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 153

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 14/153 (9%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           + ++ L+I        D        E       + + + G+F  ++  ELS+VF     I
Sbjct: 1   MSQIQLEINNRYKQLLDP-------ESATVTLFTAIEASGHFPIQSG-ELSIVFVGDPEI 52

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
             ++ ++     PT+V++FP              G+I+++ +    ++  L       L 
Sbjct: 53  GQIHDDFMDDPSPTDVITFPA------DPEMDFAGEIIVSVDHAIRKSKELDLPLTRELS 106

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
             ++HG+LHL GYD +++ D   M   E+  L+
Sbjct: 107 LYLVHGWLHLAGYDDLNEADRAEMRKAEQIALD 139


>gi|58584858|ref|YP_198431.1| metal-dependent hydrolase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58419174|gb|AAW71189.1| Predicted metal-dependent hydrolase [Wolbachia endosymbiont strain
           TRS of Brugia malayi]
          Length = 171

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           + N   K   + +    +S+   D + +  LN  +R ++KPTNVLSFP    SS+     
Sbjct: 46  IINASLKELKIDQYKPNISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSECD--- 102

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LGDI ++ + +  E++        H+ H+++HG LHLLGYDH    +  VM+ LE  IL
Sbjct: 103 -LGDIAISIDTVRKESDEYHIPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKIL 161

Query: 160 EDLGIN 165
             LG N
Sbjct: 162 ASLGYN 167


>gi|119357533|ref|YP_912177.1| hypothetical protein Cpha266_1736 [Chlorobium phaeobacteroides DSM
           266]
 gi|145572761|sp|A1BH76|RRMF_CHLPD RecName: Full=Probable rRNA maturation factor
 gi|119354882|gb|ABL65753.1| protein of unknown function UPF0054 [Chlorobium phaeobacteroides
           DSM 266]
          Length = 142

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 9/134 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R L E V  + V+ ++ +  F+ E++V +   +  +  I  +N E+ G D PT+ ++F  
Sbjct: 13  RELAESVLTEVVTTVLQEEGFLIESLVAV---YCGNKMIHRINREFLGHDYPTDTITFSY 69

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +  S         G+  ++ + +E  A      F+  L+ + IH  LHL GY    D++ 
Sbjct: 70  SKGSEID------GEFYISLDAVEENALRYKVGFDEELMRVTIHSALHLAGYQDGKDEER 123

Query: 149 CVMEGLERSILEDL 162
             M+  E   L+  
Sbjct: 124 VQMQEKEALYLKRF 137


>gi|300770444|ref|ZP_07080323.1| possible metal dependent hydrolase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762920|gb|EFK59737.1| possible metal dependent hydrolase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 142

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 7/141 (4%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + ++   +   +    + +++ I    F  + + EL+ +F+    +  +N +Y   D  
Sbjct: 6   FFAEDTDFKPKEKQKIRQWIADTIKSEGF--KRVGELNFIFSSDAYLLEINKQYLNHDTF 63

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T++++F ++          + GDI ++ E I+  A        + L  ++IHG LHL GY
Sbjct: 64  TDIVTFDSSEEED-----TIAGDIFISIERIQDNAEKFKVAERDELHRVVIHGVLHLCGY 118

Query: 141 DHVDDKDACVMEGLERSILED 161
                +D   M   E   L  
Sbjct: 119 HDKKAEDKKRMTEKEDEYLSK 139


>gi|58697454|ref|ZP_00372745.1| putative metal-dependent hydrolase [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58536113|gb|EAL59737.1| putative metal-dependent hydrolase [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 160

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 8/155 (5%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           L L++ + +  W   I         F   V N   K   +      +S+   D   +  L
Sbjct: 10  LMLEVNILDKKWCSIIENPK----NFVLGVINASLKELKIDHYKPNISIALADDDLLHQL 65

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++R +DKPTNVLSFP    S++      LGDI ++ + I+ E++        H+ H++
Sbjct: 66  NLKFREMDKPTNVLSFPYEQLSNECD----LGDIAISIDTIKRESHEYYIPILAHIAHML 121

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +HG LHLLGYDH    +  +M+ LER IL  LG N
Sbjct: 122 VHGLLHLLGYDHQKKDEEIIMKNLEREILASLGYN 156


>gi|227538918|ref|ZP_03968967.1| possible metal dependent hydrolase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227241121|gb|EEI91136.1| possible metal dependent hydrolase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 142

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 7/141 (4%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + ++   +   +    + ++  I    F  + + EL+ +F+    +  +N +Y   D  
Sbjct: 6   FFAEDTDFKPKEKQKIRQWIAETIKSEGF--KRVGELNFIFSSDAYLLEINKQYLNHDTF 63

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T++++F ++          + GDI ++ E I+  A        + L  ++IHG LHL GY
Sbjct: 64  TDIVTFDSSEEED-----TIAGDIFISIERIQDNAEKFKVAERDELHRVVIHGVLHLCGY 118

Query: 141 DHVDDKDACVMEGLERSILED 161
                +D   M   E   L  
Sbjct: 119 HDKKAEDKKRMTEKEDEYLSK 139


>gi|71083090|ref|YP_265809.1| hypothetical protein SAR11_0385 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|123647146|sp|Q4FNN3|RRMF_PELUB RecName: Full=Probable rRNA maturation factor
 gi|71062203|gb|AAZ21206.1| Conserved hypothetical protein [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 153

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 5/149 (3%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            + + +  E  LW  +I         F  ++     K Y      + L+++ +++  I+ 
Sbjct: 1   MIKIDVVSECTLWSKKIKRNK----TFFNSILKFFPKKYKFIGKKINLTILLSNNKNIKK 56

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHL 129
           LN ++R  +KPT+VLSFP      +   S  LGDIV++YE +    N+   EF+  +V +
Sbjct: 57  LNKDFRNKNKPTDVLSFPFE-KKFNPKKSNYLGDIVISYEFMNKPKNISILEFKQKVVKI 115

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSI 158
            IHGFLHLLG+DH+  KD   M   E  I
Sbjct: 116 FIHGFLHLLGHDHIKLKDFKKMIKEEDLI 144


>gi|325954630|ref|YP_004238290.1| metalloprotease ybeY [Weeksella virosa DSM 16922]
 gi|323437248|gb|ADX67712.1| metalloprotease ybeY [Weeksella virosa DSM 16922]
          Length = 139

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 6/129 (4%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
            + +  + +      ++I EL+ +F D   +  +N +Y   D  T+V+ F  +       
Sbjct: 16  QEWIDWITNSMLEEGKSIGELNYIFCDDEYLLAINQQYLDHDYYTDVIGFDNSEND---- 71

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             ++ GDI ++   I   A      F+N L  ++IHG LH  GY   + +D   M   E 
Sbjct: 72  --VLHGDIFISVTRIAENAQNNAVSFQNELARVMIHGILHFAGYLDYEKEDKAEMTAKEN 129

Query: 157 SILEDLGIN 165
             L    + 
Sbjct: 130 FYLNKFSLA 138


>gi|255037549|ref|YP_003088170.1| hypothetical protein Dfer_3801 [Dyadobacter fermentans DSM 18053]
 gi|254950305|gb|ACT95005.1| protein of unknown function UPF0054 [Dyadobacter fermentans DSM
           18053]
          Length = 146

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 61/141 (43%), Gaps = 8/141 (5%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           + + ++I  + +  +   K + N  +   +    + +L+ +F     +  +N +Y   D 
Sbjct: 12  SFFSEDIDFKVVNPLKTKKWLKNASNSEGY---EVSQLNYIFCSDEYLLEINKQYLDHDY 68

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T++++F  +   +      + GDI ++ + +   A     +F+  +  ++IHG LHL G
Sbjct: 69  FTDIITFDNSEEDNQ-----LEGDIYVSVDRVRENAATFHTDFDTEMRRVLIHGLLHLAG 123

Query: 140 YDHVDDKDACVMEGLERSILE 160
           +D   +     M   E   L 
Sbjct: 124 HDDTSEALKTAMRAKEDEYLR 144


>gi|116878499|ref|YP_356652.2| hypothetical protein Pcar_1233 [Pelobacter carbinolicus DSM 2380]
 gi|123770478|sp|Q3A575|RRMF_PELCD RecName: Full=Probable rRNA maturation factor
 gi|114843135|gb|ABA88482.2| conserved hypothetical protein TIGR00043 [Pelobacter carbinolicus
           DSM 2380]
          Length = 150

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 10/150 (6%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +EN     +I + TL E V  + +++        +    ELSL+  D   I+ +N +Y
Sbjct: 4   IHIENRQKNQKIAVETL-EKVAQRILND-------SECPDAELSLLIVDDIEIQQINRDY 55

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
              DKPTNV+SF        G    +LGD++++ +    +A      FE+ L  L++HG 
Sbjct: 56  LQRDKPTNVISFAMQEGEDVGLHPGLLGDVIISADTAARDAREADLPFESELYFLLLHGV 115

Query: 135 LHLLGYDHV--DDKDACVMEGLERSILEDL 162
           LHLLGYDH    ++DA  ME  E  +   +
Sbjct: 116 LHLLGYDHERGTEEDARRMEAREAELFARI 145


>gi|42520569|ref|NP_966484.1| hypothetical protein WD0726 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|99034707|ref|ZP_01314643.1| hypothetical protein Wendoof_01000541 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|225630499|ref|YP_002727290.1| hypothetical protein WRi_007500 [Wolbachia sp. wRi]
 gi|59799057|sp|Q73H48|RRMF_WOLPM RecName: Full=Probable rRNA maturation factor
 gi|254806603|sp|C0R3K7|RRMF_WOLWR RecName: Full=Probable rRNA maturation factor
 gi|42410308|gb|AAS14418.1| conserved hypothetical protein TIGR00043 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|225592480|gb|ACN95499.1| conserved hypothetical protein [Wolbachia sp. wRi]
          Length = 150

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L++ + +  W   I         F   V N   K   +      +S+   D   +  LN 
Sbjct: 2   LEVNILDKKWCSIIENPK----NFVLGVINASLKELKIDHYKPNISIALADDDLLHQLNL 57

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++R +DKPTNVLSFP    S++      LGDI ++ + I+ E++        H+ H+++H
Sbjct: 58  KFREMDKPTNVLSFPYEQLSNECD----LGDIAISIDTIKRESHEYYIPILAHIAHMLVH 113

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           G LHLLGYDH    +  +M+ LER IL  LG N
Sbjct: 114 GLLHLLGYDHQKKDEEIIMKNLEREILASLGYN 146


>gi|332884625|gb|EGK04882.1| metalloprotease [Dysgonomonas mossii DSM 22836]
          Length = 139

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 60/140 (42%), Gaps = 9/140 (6%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            +E+ L ++ +      +  +        + + ++S VF    +I  +N +Y   D  T+
Sbjct: 7   AEEVKLPSIKKRKTTDWIKLV---ATSYGKQVGDISFVFCSDKKILEVNNQYLQHDYYTD 63

Query: 83  VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           +++F            ++ GDI ++ + ++  +   G  +E  L  +IIHG LHL G + 
Sbjct: 64  IITFDYTEND------IISGDIFISVDTVKSNSETFGTNYEEELNRIIIHGILHLCGIND 117

Query: 143 VDDKDACVMEGLERSILEDL 162
               +   M   E   L+ L
Sbjct: 118 KGPGEREYMTECENKALKIL 137


>gi|149278196|ref|ZP_01884334.1| hypothetical protein PBAL39_11582 [Pedobacter sp. BAL39]
 gi|149230962|gb|EDM36343.1| hypothetical protein PBAL39_11582 [Pedobacter sp. BAL39]
          Length = 143

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 8/144 (5%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKP 80
            + +E       + +    +   IS        + EL+ +      +  +N EY   D  
Sbjct: 8   FFTEETTYTLKKKTIIKDWIKATISNE---GHELQELNFILCSDEYLLRINQEYLNHDTY 64

Query: 81  TNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGY 140
           T+V++F  + A       ++ GDI ++ E I+  A   G   +  L  ++IHG LHLLGY
Sbjct: 65  TDVITFDHSEA-----LKMIAGDIFISIERIQENAKNFGHTTQQELCRVMIHGTLHLLGY 119

Query: 141 DHVDDKDACVMEGLERSILEDLGI 164
                    +M   E   L  L +
Sbjct: 120 KDKGKAAKTLMTQKEDQYLALLSL 143


>gi|229495498|ref|ZP_04389231.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317481|gb|EEN83381.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 152

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + +  L   + A+ +  + ++   + + + ELS  FT+   I   N  +   D  T++L+
Sbjct: 11  VRVPHLRRQIIARWIRQVANE---MGKTLGELSYKFTNDAGILEANKLFLNHDYYTDILT 67

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F  +   S+  S    GDI+++ E +   A   G  +E  L  ++IHG LHL G D    
Sbjct: 68  FDASQEGSEYIS----GDILISLETVASNAEKFGVPYEEELHRVLIHGVLHLSGIDDKTP 123

Query: 146 KDACVMEGLERSIL 159
           ++  +M   E   +
Sbjct: 124 EEERLMHFAEDRAI 137


>gi|46446688|ref|YP_008053.1| hypothetical protein pc1054 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|62901435|sp|Q6MCC1|RRMF_PARUW RecName: Full=Probable rRNA maturation factor
 gi|46400329|emb|CAF23778.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 150

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 33  EVVFAKAVSNLISKGYFVKENIV--ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           ++ F+ A  + I K    KE     E+++ F D+  I  L+ +Y   D PT+ +SFP   
Sbjct: 13  DLKFSLANLDAIVKEVIQKEQQTCDEVNIYFVDTATICKLHLDYFNDDTPTDCISFPM-- 70

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
              +     +LG+I +  +     A     +        ++HG LHL+GYD +++ D  +
Sbjct: 71  DKDENSPYKILGEIFVCPQTAIEYALSHELDPYEETTLYLVHGLLHLMGYDDLEENDFLI 130

Query: 151 MEGLERSILEDL 162
           M+  E   +  L
Sbjct: 131 MKEAEIRHMTHL 142


>gi|210633814|ref|ZP_03297861.1| hypothetical protein COLSTE_01778 [Collinsella stercoris DSM 13279]
 gi|210159074|gb|EEA90045.1| hypothetical protein COLSTE_01778 [Collinsella stercoris DSM 13279]
          Length = 169

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            ++  L TL E    +A++  +     V    VE+SL + D   +  LN E+RGID+ T+
Sbjct: 6   SNDAELPTLIEEDEVRAIAAHVLASEGV-AREVEISLSYVDEDEMHELNREWRGIDRTTD 64

Query: 83  VLSFPTAFASSDGCS---SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
           VLSF    A  +       + LGD++LA E+I  +A   G    +    +++HG LHLLG
Sbjct: 65  VLSFECDSAFDEDIPVDEIVELGDVILAPEVIARQAPGFGNSAADECRLMLVHGLLHLLG 124

Query: 140 YDHVDDKDACVMEGLERSILEDLGI---NDPYEVD 171
           YDH++D +A VME  E ++L +L +    DP  ++
Sbjct: 125 YDHIEDDEAEVMEAREDALLRELAVMRGEDPSRIE 159


>gi|72387740|ref|XP_844294.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62359446|gb|AAX79883.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70800827|gb|AAZ10735.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 205

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 35/164 (21%)

Query: 36  FAKAVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           FA  V  L       +     VELS+ F    R+  LN E+RG+DKPT+VL+FP + + +
Sbjct: 18  FAAGVQGLTEAVLLAERAPQAVELSIHFVTPGRMHELNLEHRGVDKPTDVLTFPGSGSGT 77

Query: 94  DGCSSLM------------------------------LGDIVLAYEIIEIEAN---VLGK 120
                L                               LGDI  + E I +  +       
Sbjct: 78  PYAKFLNETVLLARVEGDNACVADPSVLAERRALLQELGDIYFSVEYISMRCSCRPTHCL 137

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            F ++L   + H  LH LGYDH   +    M   ER +   L +
Sbjct: 138 RFHDYLQAALTHALLHALGYDHATPEQWKRMTKRERFLRHRLSV 181


>gi|261327447|emb|CBH10422.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 205

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 35/164 (21%)

Query: 36  FAKAVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
           FA  V  L       +     VELS+ F    R+  LN E+RG+DKPT+VL+FP + + +
Sbjct: 18  FAAGVQGLTEAVLLAERAPQAVELSIHFVTPGRMHELNLEHRGVDKPTDVLTFPGSGSGT 77

Query: 94  DGCSSLM------------------------------LGDIVLAYEIIEIEAN---VLGK 120
                L                               LGDI  + E I +  +       
Sbjct: 78  PYAKFLNETVLLARVEGDNACVADPSVLAERRALLQELGDIYFSVEYIWMRCSCRPTHCL 137

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
            F ++L   + H  LH LGYDH   +    M   ER +   L +
Sbjct: 138 RFHDYLQAALTHALLHALGYDHATPEQWKRMTKRERFLRHRLSV 181


>gi|284040393|ref|YP_003390323.1| hypothetical protein Slin_5558 [Spirosoma linguale DSM 74]
 gi|283819686|gb|ADB41524.1| protein of unknown function UPF0054 [Spirosoma linguale DSM 74]
          Length = 137

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 6/127 (4%)

Query: 37  AKAVSNLISKGYFVKENIV-ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
            +A+   + +    +   V +L+ +F     +  +N +Y   D  T++++F  +      
Sbjct: 16  KQAIRQWLKQQTEAEGYSVGDLNYMFCSDEYLLQVNRDYLQHDYYTDIITFDMSEEE--- 72

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
               + GD+ ++ E +   AN L    E  +  ++ HG LHL GY    D++A +M   E
Sbjct: 73  --GKIEGDVFVSVERVIDNANKLAVPAEQEMRRVLAHGLLHLCGYGDKTDEEAALMRLKE 130

Query: 156 RSILEDL 162
              +  L
Sbjct: 131 DEWISRL 137


>gi|332879991|ref|ZP_08447675.1| translation metalloprotein YbeY [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332681987|gb|EGJ54900.1| translation metalloprotein YbeY [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 138

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             + V  +        + I +++ +F D   +  +N +Y   D  T++++F         
Sbjct: 19  VKQWVKQI---ALSEGKKIGDINYIFCDDVYLHKINVQYLQHDTLTDIITFDYTE----- 70

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
               +  DI ++ E +   A++ G  FE  L+ ++ HG LHL GY      D+ +M   E
Sbjct: 71  -GITLNSDIYISIERVRENADIFGVTFEQELLRVLAHGILHLCGYKDKTPADSELMRAKE 129

Query: 156 RS 157
             
Sbjct: 130 DE 131


>gi|300870905|ref|YP_003785776.1| hypothetical protein BP951000_1287 [Brachyspira pilosicoli 95/1000]
 gi|300688604|gb|ADK31275.1| unnamed protein product [Brachyspira pilosicoli 95/1000]
          Length = 153

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
            +S          E++LVF++   I  LN ++R  DK T+VL+FP   A+         G
Sbjct: 22  FLSHAVKAANIDGEVNLVFSNDDYIRGLNKQFRNKDKATDVLTFPMGEANEG-------G 74

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD-----DKDACVMEGLERS 157
           DIV++YE +    +    +    ++ LI+H  LHL G  H        K+   M  L + 
Sbjct: 75  DIVISYEWVLDRYSEDKIKMT--VIKLIVHSILHLQGIHHNYTEKSLKKNYKRMRELYKK 132

Query: 158 ILEDL 162
           ILE +
Sbjct: 133 ILEHI 137


>gi|145558835|sp|Q5GS35|RRMF_WOLTR RecName: Full=Probable rRNA maturation factor
          Length = 150

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           + N   K   + +    +S+   D + +  LN  +R ++KPTNVLSFP    SS+     
Sbjct: 25  IINASLKELKIDQYKPNISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSECD--- 81

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            LGDI ++ + +  E++        H+ H+++HG LHLLGYDH    +  VM+ LE  IL
Sbjct: 82  -LGDIAISIDTVRKESDEYHIPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKIL 140

Query: 160 EDLGIN 165
             LG N
Sbjct: 141 ASLGYN 146


>gi|161833656|ref|YP_001597852.1| hypothetical protein SMGWSS_025 [Candidatus Sulcia muelleri GWSS]
 gi|172048393|sp|A8Z5Q5|RRMF_SULMW RecName: Full=Probable rRNA maturation factor
 gi|152206145|gb|ABS30455.1| conserved hypothetical protein SMGWSS_025 [Candidatus Sulcia
           muelleri GWSS]
          Length = 141

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 9/135 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E       E  F+K +  ++SK     +   EL+ +F D   +  +N +Y   +  T+V+
Sbjct: 7   ETKFHLYNEFYFSKWIFFVVSKENKFIK---ELNFIFCDDQYLININNKYLNKNYYTDVI 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           +F  +   +        GDI ++ + I+  +    K F + L  +IIH  LHL+GY    
Sbjct: 64  TFDNSEDKNLD------GDIFISIKRIKYNSLKFKKLFYDELKRVIIHAVLHLIGYKDKK 117

Query: 145 DKDACVMEGLERSIL 159
           + +  +M   E   L
Sbjct: 118 ETEKYIMSKKEDIYL 132


>gi|325281349|ref|YP_004253891.1| metalloprotease ybeY [Odoribacter splanchnicus DSM 20712]
 gi|324313158|gb|ADY33711.1| metalloprotease ybeY [Odoribacter splanchnicus DSM 20712]
          Length = 143

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 9/132 (6%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
             + +  K +  +        +++  ++ +F D   I  +N +Y   D  T+V++F    
Sbjct: 18  FSDKLICKWIEVI---AGHYNKSVGAINFIFCDDDYILAVNRQYLKHDYYTDVITFDYCE 74

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
                   ++ GD+ ++ + ++  + +    FEN    +I H  LHL+G+    D D+  
Sbjct: 75  GD------ILSGDVFISLDTVKSNSEMFSTFFENEFCRVICHSVLHLIGFKDKTDVDSKE 128

Query: 151 MEGLERSILEDL 162
           M   E   L+ L
Sbjct: 129 MRKNENICLDLL 140


>gi|167737213|ref|ZP_02409987.1| hypothetical protein Bpse14_04056 [Burkholderia pseudomallei 14]
          Length = 231

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 12/123 (9%)

Query: 9   PRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIE 68
           P LDL +      +GDEI       +   K ++  +    F   +  + ++ F  +    
Sbjct: 121 PELDLAV-----QYGDEIGDAQRKSLPKRKVIAEWLEPAIF---SDAQFTVRFVGADEGR 172

Query: 69  TLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            LN  YR  D  TNVL+F       +    + + D+VL   ++E EA   GK    H  H
Sbjct: 173 ALNHSYRHKDYATNVLTFAY----GEEPDGVTVADLVLCCPVVEKEAREQGKTLVAHYAH 228

Query: 129 LII 131
           L++
Sbjct: 229 LLV 231


>gi|255030168|ref|ZP_05302119.1| putative metalloprotease [Listeria monocytogenes LO28]
          Length = 86

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 43/78 (55%)

Query: 88  TAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
             +   D  +  MLGDI+++ E  E +A   G      L  L +HG LHLLGYDH++  +
Sbjct: 8   IDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDE 67

Query: 148 ACVMEGLERSILEDLGIN 165
             VM GL++ +L+  G+ 
Sbjct: 68  EKVMFGLQKEVLDAYGLE 85


>gi|89889741|ref|ZP_01201252.1| conserved hypothetical protein, UPF0054 family [Flavobacteria
           bacterium BBFL7]
 gi|89518014|gb|EAS20670.1| conserved hypothetical protein, UPF0054 family [Flavobacteria
           bacterium BBFL7]
          Length = 139

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             +   E+ F+K +  + S      ++I +LS VF     +  +N +Y   D  T++++F
Sbjct: 9   DFKLTDEIYFSKWLDAIASSEN---KSIGDLSYVFCTDEFLLDINQQYLNHDTLTDIITF 65

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                       L+ G+I ++ + ++  A+     F   L+ ++ HG LHLLGY    D+
Sbjct: 66  DYCD------DQLIHGEIYISIDRVKENASDFQVTFTEELLRVMAHGLLHLLGYGDKLDE 119

Query: 147 DACVMEGLERS 157
           +  +M   E  
Sbjct: 120 EKVIMRLKEDE 130


>gi|301107293|ref|XP_002902729.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262098603|gb|EEY56655.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 136

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 11/95 (11%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA-------FASSDGCSSLMLGDIVLAY 108
           ++ ++ T    ++ LN  +R  DKPT++LSFP         F          LGDI ++ 
Sbjct: 42  DVGVMLTTDTHVQKLNRRFRKKDKPTDILSFPFHKVRAPGRFPRIRAREERYLGDIYISP 101

Query: 109 EIIEIEAN----VLGKEFENHLVHLIIHGFLHLLG 139
             ++ +            E  L  L+ HG  HLLG
Sbjct: 102 AYVQRQCEDPQLEEITTLEERLPVLMAHGLCHLLG 136


>gi|237756142|ref|ZP_04584714.1| putative metalloprotease [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691706|gb|EEP60742.1| putative metalloprotease [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 111

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 5/102 (4%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E++ + + +         ++S+      N VE+S+  TD+ RI  +N E+RG DKPT+VL
Sbjct: 15  EVYSKEITKKFLKDITEKILSELNL---NNVEISITLTDNERIRKINKEWRGKDKPTDVL 71

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           SFP     + G    +LGD++++    + +A  +G   +   
Sbjct: 72  SFPQ--DETIGYKYRLLGDVIISLPYAKAQAEEIGFTLKEEF 111


>gi|269102015|ref|ZP_06154712.1| predicted metal-dependent hydrolase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161913|gb|EEZ40409.1| predicted metal-dependent hydrolase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 78

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 47/76 (61%)

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
               +LGD+V+  +++E EA    K    H  H+++HG LHLLGYDH++D +A  ME LE
Sbjct: 1   MEMDLLGDLVICRQVVEREAPEQNKTLTAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALE 60

Query: 156 RSILEDLGINDPYEVD 171
             I+E +G  DPY  +
Sbjct: 61  TEIMEKMGFPDPYAAE 76


>gi|293977768|ref|YP_003543198.1| hypothetical protein DMIN_00240 [Candidatus Sulcia muelleri DMIN]
 gi|292667699|gb|ADE35334.1| conserved hypothetical protein TIGR00043 [Candidatus Sulcia
           muelleri DMIN]
          Length = 141

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 9/135 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E       E  F+K +  ++SK     +   EL+ +F D   +  +N +Y   +  T+V+
Sbjct: 7   ETKFHLYNEFYFSKWIFFVVSKENKFIK---ELNFIFCDDQYLININNKYLNKNYYTDVI 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           +F  +   +        GDI ++ + I+  +  L K F + L  +IIH  LHL+GY    
Sbjct: 64  TFDNSEEKNLD------GDIFISIKRIKYNSLKLKKLFYDELKRVIIHAVLHLIGYKDKK 117

Query: 145 DKDACVMEGLERSIL 159
           + +  +M   E   L
Sbjct: 118 ETEKYIMSKKEDIYL 132


>gi|162448297|ref|YP_001610664.1| hypothetical protein sce0028 [Sorangium cellulosum 'So ce 56']
 gi|161158879|emb|CAN90184.1| hypothetical protein sce0028 [Sorangium cellulosum 'So ce 56']
          Length = 201

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 35/130 (26%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF-------------ASSDGCSSL 99
             VELS+   +   I  LN  YR  DKPT+VL+FP                         
Sbjct: 55  QGVELSVALVNDEAIHELNRSYRRKDKPTDVLAFPMLDQNGADSRRRGRRGPVDPSVWRG 114

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVH-----------LIIHGFLHLLGYDHVDDKDA 148
           +LGD++++ +    +A    +   + +                        YDH  D + 
Sbjct: 115 LLGDVIVSIDTAARQAAERDRPLLDEITMLLGHGLLHLLG-----------YDHKTDAEE 163

Query: 149 CVMEGLERSI 158
             M  L R +
Sbjct: 164 REMTDLTREL 173


>gi|319953028|ref|YP_004164295.1| metalloprotease ybey [Cellulophaga algicola DSM 14237]
 gi|319421688|gb|ADV48797.1| metalloprotease ybeY [Cellulophaga algicola DSM 14237]
          Length = 139

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 9/133 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E+      E  +A  ++ +I       +++  LS +F D   +  +N +Y   D  T+++
Sbjct: 7   ELDFELSNEPYYADWLTRVIESE---GKSLGNLSYIFCDDAYLLDINMKYLDHDTYTDIV 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           +F      +        GD+ ++ E +   A     +F   L  ++ HG LHL GY    
Sbjct: 64  TFDYCEGDTIA------GDLFISIERVLENAKEYNVDFLEELHRVMSHGVLHLAGYKDKT 117

Query: 145 DKDACVMEGLERS 157
           D DA +M   E  
Sbjct: 118 DMDAALMRKKEEE 130


>gi|255550974|ref|XP_002516535.1| Phosphatase yidA, putative [Ricinus communis]
 gi|223544355|gb|EEF45876.1| Phosphatase yidA, putative [Ricinus communis]
          Length = 595

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 16/139 (11%)

Query: 4   KKVNLPRLDLQIAVENALWGDEIH------LRTLCEVVFAKAVSNLISKGYFVKE----- 52
            K N  ++D+ I +E+ L  D         LR    +    A   L    Y  ++     
Sbjct: 109 TKENELQIDVSICIEDDLPDDPEILSISELLRLNVPMAMKLAFDGLKDSNYKTRDTAISD 168

Query: 53  ----NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAY 108
                 VELS++  +   I  LN ++R  D  T+VLS             LMLGDIV++ 
Sbjct: 169 IGGFQSVELSVLLCNDDFIRKLNKDWRDEDHATDVLSMSQHVPGL-KLPVLMLGDIVISV 227

Query: 109 EIIEIEANVLGKEFENHLV 127
           E    +A   G    + + 
Sbjct: 228 ETAARQAEERGLSLIDEIR 246


>gi|218247079|ref|YP_002372450.1| hypothetical protein PCC8801_2275 [Cyanothece sp. PCC 8801]
 gi|257060149|ref|YP_003138037.1| hypothetical protein Cyan8802_2326 [Cyanothece sp. PCC 8802]
 gi|218167557|gb|ACK66294.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 8801]
 gi|256590315|gb|ACV01202.1| protein of unknown function UPF0054 [Cyanothece sp. PCC 8802]
          Length = 178

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 10/164 (6%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLIS--KGYFVKENIVELSLVFTDSHRI 67
            L+LQ   +   + D+     +    +   +   +   K      +  EL+L  T+   I
Sbjct: 12  DLNLQNVFDFNAFCDQKSSDIMA-ATWQPWIKTWLEALKPNLPPADTYELTLRLTEDLEI 70

Query: 68  ETLNFEYRGIDKPTNVLS-------FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           +TLN +YR  ++PT+VL+       FP           L LGDI+++ E    +A     
Sbjct: 71  QTLNAQYRQKNQPTDVLAFAALEVDFPVPAEEIAALEPLYLGDIIISVETANKQAQQNHH 130

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
                L  L  HG LHLLG+DH D+     M   + ++L  +G+
Sbjct: 131 SLLVELAWLAAHGLLHLLGWDHPDEDSLEAMLSQQETLLTLVGL 174


>gi|83816771|ref|YP_446198.1| hypothetical protein SRU_2092 [Salinibacter ruber DSM 13855]
 gi|294508126|ref|YP_003572184.1| Conserved hypothetical protein containing UPF0054 [Salinibacter
           ruber M8]
 gi|123528328|sp|Q2S0T3|RRMF_SALRD RecName: Full=Probable rRNA maturation factor
 gi|83758165|gb|ABC46278.1| conserved hypothetical protein TIGR00043 [Salinibacter ruber DSM
           13855]
 gi|294344454|emb|CBH25232.1| Conserved hypothetical protein containing UPF0054 [Salinibacter
           ruber M8]
          Length = 157

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 3/108 (2%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAYEIIEI 113
           LSLV TD   +  LN  Y   D  T+VLSF      +         + G++ +  +    
Sbjct: 43  LSLVLTDHDTVRRLNQSYLDHDYDTDVLSFSLREGPAPSSGASGEGIEGEVYVDLDTAAE 102

Query: 114 EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
             +     FE      ++HG LHL+GYD         M   E   L  
Sbjct: 103 RHDEFDTSFEREAYRYVVHGLLHLVGYDDAQPAGQDKMREKEDQYLNA 150


>gi|193215488|ref|YP_001996687.1| hypothetical protein Ctha_1783 [Chloroherpeton thalassium ATCC
           35110]
 gi|238692691|sp|B3QTP2|RRMF_CHLT3 RecName: Full=Probable rRNA maturation factor
 gi|193088965|gb|ACF14240.1| protein of unknown function UPF0054 [Chloroherpeton thalassium ATCC
           35110]
          Length = 141

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 9/134 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + L E    KA+  ++       E   E+S V+     I  +N E+   D PT+ +SF  
Sbjct: 11  QELPEEKIRKAIELVLQGEKCEAE---EISAVYCGDRLIRKINIEHLAHDYPTDTISF-- 65

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                    + + G+  ++ + +   A      FEN L+ + IH  LHL+G++       
Sbjct: 66  ----RLNSGNAIEGEFYISCDTVRRNAQEYESSFENELLRVTIHSVLHLIGFEDQSAAQK 121

Query: 149 CVMEGLERSILEDL 162
             M   E   L  L
Sbjct: 122 AEMTQKENRYLAAL 135


>gi|307128532|ref|YP_003880562.1| hypothetical protein SMCARI_030 [Candidatus Sulcia muelleri CARI]
 gi|306482994|gb|ADM89864.1| conserved hypothetical protein [Candidatus Sulcia muelleri CARI]
          Length = 141

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E       E++F+K +  ++SK    K+NI EL+ +F D + +  +N +Y   +  T+V+
Sbjct: 7   ETKFHLYNEILFSKFIFFVVSKE---KKNIKELNFIFCDDNYLININKKYINKNNYTDVI 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           +F      +      + GDI L+ + I+  +    K F N L  ++IH  LHL+GY   +
Sbjct: 64  TFENYENKN------LYGDIFLSIKRIKYNSFKFKKLFFNELKRVMIHAVLHLIGYKDKN 117

Query: 145 DKDACVMEGLER 156
             +  +M   E 
Sbjct: 118 KFEKKIMYKKEN 129


>gi|327403529|ref|YP_004344367.1| metalloprotease ybeY [Fluviicola taffensis DSM 16823]
 gi|327319037|gb|AEA43529.1| metalloprotease ybeY [Fluviicola taffensis DSM 16823]
          Length = 146

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEII 111
           +++ ++SL+F     +  +N EY   D  T++++F            L+ GD+ ++ + +
Sbjct: 33  KSLGDISLIFCSDEHLLEMNREYLQHDFFTDIITFDYTEED------LVSGDLFISVDRV 86

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              A+     F++ L  + +HG LHL GY    D+D  +M   E  +L
Sbjct: 87  RDNADEFDVLFQDELHRVCVHGLLHLCGYKDKSDEDEKLMRQKENDML 134


>gi|325105734|ref|YP_004275388.1| protein of unknown function UPF0054 [Pedobacter saltans DSM 12145]
 gi|324974582|gb|ADY53566.1| protein of unknown function UPF0054 [Pedobacter saltans DSM 12145]
          Length = 145

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 51  KENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEI 110
           K+ + EL+ +      +  +N EY   D  T++++F  +         ++ GD+ ++ E 
Sbjct: 35  KKELQELNFILCSDEYLLKINQEYLNHDTYTDIITFDNSEDE-----GMIYGDVFISIER 89

Query: 111 IEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           ++  A + G +  + L  +IIHG LHLLGY     ++  +M   E   L  
Sbjct: 90  VKENARIFGVKTADELHRVIIHGTLHLLGYPDKKKQEKALMTEKENFYLSK 140


>gi|218513639|ref|ZP_03510479.1| hypothetical protein Retl8_07906 [Rhizobium etli 8C-3]
          Length = 92

 Score = 99.4 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 8  LPRLDLQIAVENALWGDEIHLRTLCEVVF-AKAVSNLISKGYFVKENIVELSLVFTDSHR 66
          +  LD+QI++EN  W +E  L   C  V  A AV    S+         E+SLVFTD   
Sbjct: 1  MAELDIQISIENIGWPEEETLLAFCGRVLGAAAVYLRDSEKQPFPTMPPEVSLVFTDDAS 60

Query: 67 IETLNFEYRGIDKPTNVLSFPTAFASSDGCSS 98
          I+ +N E+RG DK TNVLSFP           
Sbjct: 61 IQDINAEWRGKDKATNVLSFPAFPVQPGKMPG 92


>gi|297597588|ref|NP_001044196.2| Os01g0739400 [Oryza sativa Japonica Group]
 gi|255673671|dbj|BAF06110.2| Os01g0739400 [Oryza sativa Japonica Group]
          Length = 251

 Score = 98.6 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 4/113 (3%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N     +I L  L +  +    +++   G + K   VE+S++  + + I+ LN E+RG D
Sbjct: 138 NVPMAMKIALDGLLDSNYKTRDTSISDVGRYDK---VEVSVLLCNDNFIQNLNKEWRGED 194

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLII 131
               +LS        D    LMLGDIV++ E    +A   G    + +  L +
Sbjct: 195 SCIEMLSMSQYIPDLD-VPILMLGDIVISVETAARQAEERGHTLLDEVRILAV 246


>gi|255529923|ref|YP_003090295.1| hypothetical protein Phep_0007 [Pedobacter heparinus DSM 2366]
 gi|255342907|gb|ACU02233.1| protein of unknown function UPF0054 [Pedobacter heparinus DSM 2366]
          Length = 142

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 8/130 (6%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS 92
           +      + + I++  +V     EL+ +      +  +N +Y   D  T+V++F  A   
Sbjct: 20  KTQIKDWIRSAIAEEGYVLR---ELNFILCSDEYLLRINQDYLQHDTYTDVITFDNAEE- 75

Query: 93  SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVME 152
                  ++GDI ++ E ++  A  L       L  ++IHG LHLLGY          M 
Sbjct: 76  ----LKTIVGDIFISIERVQENARALKLPVAEELCRVMIHGTLHLLGYKDKGKAAKATMT 131

Query: 153 GLERSILEDL 162
             E   L  L
Sbjct: 132 TREDHHLAKL 141


>gi|88801787|ref|ZP_01117315.1| hypothetical protein PI23P_03972 [Polaribacter irgensii 23-P]
 gi|88782445|gb|EAR13622.1| hypothetical protein PI23P_03972 [Polaribacter irgensii 23-P]
          Length = 137

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           EL+ +F D   +  LN E+   D  T+++SF       +    L+ GDI ++ E +   A
Sbjct: 35  ELNYIFCDDAYLLKLNVEFLQHDTFTDIISF------DNSIGKLISGDIFISTERVAENA 88

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
                 F+  L  ++IHG LH +G+     ++   M   E + L  L 
Sbjct: 89  TDYKVSFQEELQRVMIHGVLHCVGFKDKTMEEQEEMTRQENTALLVLN 136


>gi|308808316|ref|XP_003081468.1| Protein of unknown function UPF0054 (ISS) [Ostreococcus tauri]
 gi|116059931|emb|CAL55990.1| Protein of unknown function UPF0054 (ISS) [Ostreococcus tauri]
          Length = 122

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/65 (53%), Positives = 43/65 (66%)

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
           A+E    EA   G  FE H+ HLI+HG LHLLGYDH+ D DA +ME LE  IL +LG+ +
Sbjct: 52  AWETCGREAAEQGIAFEQHVTHLIVHGVLHLLGYDHMRDADATLMERLEAEILGNLGLPN 111

Query: 167 PYEVD 171
           PY  D
Sbjct: 112 PYGED 116


>gi|321311000|ref|YP_004193329.1| hypothetical protein HF1_14820 [Mycoplasma haemofelis str. Langford
           1]
 gi|319802844|emb|CBY93490.1| conserved hypothetical protein [Mycoplasma haemofelis str. Langford
           1]
          Length = 132

 Score = 98.2 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS 97
           +A+   +   + + +  VEL++   +   I +LN  YR  DK T+VLSFP    S +   
Sbjct: 22  EAIYAHLKDRFLIPDCEVELAI--VNEEEIRSLNATYRNQDKVTDVLSFPVKTESHE--- 76

Query: 98  SLMLGDIVLAY-EIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
              LG I   Y E+I        ++F +   +L IH FLHLLGY+H        M  L+ 
Sbjct: 77  -RFLGAIYFCYSEVINRN-----EDFLSGFCYLFIHSFLHLLGYEHG-----EEMFSLQD 125

Query: 157 SILEDL 162
            I    
Sbjct: 126 EIFSRF 131


>gi|323359831|ref|YP_004226227.1| metal-dependent hydrolase [Microbacterium testaceum StLB037]
 gi|323276202|dbj|BAJ76347.1| predicted metal-dependent hydrolase [Microbacterium testaceum
           StLB037]
          Length = 155

 Score = 98.2 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 14/156 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E+    DE  L  L E   A+                 ++++V  D   +E+L
Sbjct: 1   MTIEINNESGYDIDEQVLLRLMEYNLAE----------LHVSADADVAIVLVDEGAMESL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHL 126
           + ++     PT+VLSFP       +      + +LGDIVL   + E +A       ++ L
Sbjct: 51  HVQWMDEPGPTDVLSFPMDELRPGSEDAPTPAGLLGDIVLCPSVAEAQAVTAQHSTQDEL 110

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           + L  HG LHLLG+DH +  +   M GL+R ++   
Sbjct: 111 ILLTTHGLLHLLGFDHAEPDEEREMFGLQRELITGF 146


>gi|296126703|ref|YP_003633955.1| hypothetical protein Bmur_1670 [Brachyspira murdochii DSM 12563]
 gi|296018519|gb|ADG71756.1| protein of unknown function UPF0054 [Brachyspira murdochii DSM
           12563]
          Length = 145

 Score = 97.8 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
            +     V E   +++L+F D   I+ LN ++R  +K T+VL+FP              G
Sbjct: 21  FLYNSLIVSEVKGDVNLLFCDDEYIKKLNNDFRNKNKATDVLTFPMGDDDEG-------G 73

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           DIV++YE ++   +    +    ++ LIIH  LHL G  H   K   +ME  E+  +++L
Sbjct: 74  DIVISYEWVKNRYSEDKIKKT--VLKLIIHSILHLKGIHHNYSK-KSLMENNEK--MKEL 128


>gi|326488921|dbj|BAJ98072.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 590

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 18/129 (13%)

Query: 15  IAVENALWGDEIHLRTLCEV-------VFAKAVSNLISKGY---------FVKENIVELS 58
           I+VE+ L  D+I +  + E+           A+  L+   Y           K   VE+S
Sbjct: 113 ISVEDDL-PDDIEVLNIIEIMKLNVPMAMKIALDGLLEYNYKTRDTSISNIGKYEKVEVS 171

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           ++  + + I+ LN E+RG D  T++LS        D   +LMLGDIV++ E    +A   
Sbjct: 172 VLVCNDNFIQNLNKEWRGEDCATDMLSVSQFIPDLD-VPTLMLGDIVISVETAARQAEAR 230

Query: 119 GKEFENHLV 127
           G    + L 
Sbjct: 231 GHTLLDELR 239


>gi|223940463|ref|ZP_03632314.1| protein of unknown function UPF0054 [bacterium Ellin514]
 gi|223890866|gb|EEF57376.1| protein of unknown function UPF0054 [bacterium Ellin514]
          Length = 159

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 60/136 (44%), Gaps = 5/136 (3%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           H R +       A   LIS    +     ++++       +  +N ++      T+V++F
Sbjct: 12  HTRLIDRRWLRWATKELISD--LLHFEDFDVTIHLVGEREMTRINEKHLQHAGSTDVITF 69

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             + +     S  ++G++ +  +   ++A      +++  +  I+HG LHL GYD ++  
Sbjct: 70  DYSDSPG---SEPLIGELFICVDEALVQAIRFKTTWQSETMRYIVHGLLHLKGYDDLETT 126

Query: 147 DACVMEGLERSILEDL 162
               M+  E  +L++L
Sbjct: 127 ARRKMKREENKLLKEL 142


>gi|312129899|ref|YP_003997239.1| hypothetical protein Lbys_1166 [Leadbetterella byssophila DSM
           17132]
 gi|311906445|gb|ADQ16886.1| protein of unknown function UPF0054 [Leadbetterella byssophila DSM
           17132]
          Length = 152

 Score = 97.4 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 9/139 (6%)

Query: 25  EIHLRTLCEVVFAK-AVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           E+    L E    K  + NLI       + + EL+ +F     +  +N +Y      T++
Sbjct: 17  EVEGFRLTERTKKKSWLKNLIQSH---GKKVGELNYIFLSDEDLLEINIQYLDHHTYTDI 73

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHV 143
           ++F  +         ++ GDI ++ + +   A      FE  L+ ++ HG LHLLG    
Sbjct: 74  ITFDNSEEE-----KMIEGDIFISVDRVRENAQTFKVSFEQELLRVMAHGVLHLLGLKDK 128

Query: 144 DDKDACVMEGLERSILEDL 162
            ++D+ +M   E   +   
Sbjct: 129 TEEDSKLMRAGEEKAIAAY 147


>gi|225620349|ref|YP_002721606.1| putative metal-dependent hydrolase [Brachyspira hyodysenteriae WA1]
 gi|511147|emb|CAA51656.1| unnamed protein product [Brachyspira hyodysenteriae]
 gi|225215168|gb|ACN83902.1| putative metal-dependent hydrolase [Brachyspira hyodysenteriae WA1]
          Length = 141

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 16/113 (14%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYE-IIEIE 114
           E++L+F D   I+ LN ++R  DK T+VL+FP    +         GDIV++YE ++   
Sbjct: 34  EVNLLFCDDEYIKNLNRQFRNKDKATDVLTFPMGDINEG-------GDIVISYEWVVTRY 86

Query: 115 ANVLGKEFENHLVHLIIHGFLHLLGYDHVDD-----KDACVMEGLERSILEDL 162
           ++   K+    ++ LIIH  LHL G  H        ++   M+ L + +++ +
Sbjct: 87  SDEKIKKT---VLKLIIHSILHLKGIHHNYTRKSLMENNKKMKELYKKVIKTI 136


>gi|114326780|ref|YP_743937.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1]
 gi|122328235|sp|Q0BVY8|RRMF_GRABC RecName: Full=Probable rRNA maturation factor
 gi|114314954|gb|ABI61014.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
          Length = 176

 Score = 97.0 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 6/130 (4%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
              LI +      +  +  ++  D   +  LN  +RG DKPTNVL+F        G    
Sbjct: 51  ADRLIRRVARAAGSTADCVVLSCDRD-VRRLNARHRGKDKPTNVLTF-----EPVGMPGA 104

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
             G+IVLA  ++  EA    K   +HL HL++HG LHL G+DH    DA  ME  E  I+
Sbjct: 105 EGGEIVLALGVVLREAKAARKRPVHHLAHLLVHGVLHLHGHDHHHAGDARRMEAEEARIM 164

Query: 160 EDLGINDPYE 169
             LG+ +P++
Sbjct: 165 RSLGMPNPWK 174


>gi|224372821|ref|YP_002607193.1| putative metalloprotease [Nautilia profundicola AmH]
 gi|254806612|sp|B9L985|RRMF_NAUPA RecName: Full=Probable rRNA maturation factor
 gi|223589812|gb|ACM93548.1| conserved hypothetical protein [Nautilia profundicola AmH]
          Length = 139

 Score = 97.0 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 7/110 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ L+ TD   I+ LN ++R  DK T+VLSFP      +    + LG IV++ +  +  A
Sbjct: 28  DIELILTDDEEIKELNSQFRNKDKATDVLSFPL-----EAMPGMPLGSIVISIDTAKKGA 82

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G   ++ +  L +HG LHLLGYDH  D     M   E  I++ L + 
Sbjct: 83  EEFGHSVDDEIRLLFLHGLLHLLGYDHETDN--GEMRAKEEEIIKKLNLP 130


>gi|150020475|ref|YP_001305829.1| hypothetical protein Tmel_0577 [Thermosipho melanesiensis BI429]
 gi|172048663|sp|A6LKJ3|RRMF_THEM4 RecName: Full=Probable rRNA maturation factor
 gi|149792996|gb|ABR30444.1| protein of unknown function UPF0054 [Thermosipho melanesiensis
           BI429]
          Length = 138

 Score = 97.0 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 12/119 (10%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
             V ++LVF    +I+ +N E+R I+  T+VL+F             +  +I L  ++IE
Sbjct: 26  KEVNINLVFLSKEKIKKINREFRNINSETDVLTFVYGDDD-------LFAEIYLCEDVIE 78

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK-DACVMEGLE----RSILEDLGIND 166
             A      +E  L+ ++IH  LH  GYDH  DK +A  M  L+       L+  G+++
Sbjct: 79  ENAKKFSNTYEKELLMVLIHAALHCSGYDHEYDKTNAKKMFDLQERYYEKYLKKYGMDN 137


>gi|291514792|emb|CBK64002.1| conserved hypothetical protein TIGR00043 [Alistipes shahii WAL
           8301]
          Length = 145

 Score = 96.7 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 8/146 (5%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           + D+   R   + + A+ +  + +   +    + +++ +F  + R+  +N +Y G D  T
Sbjct: 6   FTDDCTYRLPQKRLTARWLHEVAAGEGYA---LGDVTYIFCSAQRLLEMNRQYLGHDYFT 62

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           +V++F     S    + ++ GDI +  E +   A   G      +  +++HG LHL G  
Sbjct: 63  DVITFDY---SDRKGARIVSGDIFIDVETVADNARQYGATTLQEMRRVVVHGILHLCGQG 119

Query: 142 HVDDKDACVMEGLERSILEDLGINDP 167
               +    M   E   L+     DP
Sbjct: 120 DKTPRTNAQMHRKEDKYLKFW--EDP 143


>gi|284044304|ref|YP_003394644.1| hypothetical protein Cwoe_2850 [Conexibacter woesei DSM 14684]
 gi|283948525|gb|ADB51269.1| protein of unknown function UPF0054 [Conexibacter woesei DSM 14684]
          Length = 138

 Score = 96.7 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLM-----LGDIVLAYEII 111
           +++ F D+  I+TLN ++RG D PT+VLSFP      +    +      LGD+V+     
Sbjct: 40  VAVAFVDAETIQTLNRDHRGRDAPTDVLSFPIDGIDGEALRQIPAAQRELGDVVICP--- 96

Query: 112 EIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
                         L   ++HG LHL G DH  D     M  L+  +L 
Sbjct: 97  ---------PHTEDLSEAVVHGALHLTGMDHEVDD--GEMLALQAELLR 134


>gi|187734775|ref|YP_001876887.1| protein of unknown function UPF0054 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424827|gb|ACD04106.1| protein of unknown function UPF0054 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 165

 Score = 96.3 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+ +       I  ++  +      T+V++FP             +G+I+++++    +A
Sbjct: 51  EVEISVVSDDVIRDVHARFLNDPTATDVITFPHGDG---------IGEIIVSFDTAIRQA 101

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           +   +     L   ++HG LHL GY   + ++   M   +  ++   G
Sbjct: 102 SEFREPVFRELFRYMVHGLLHLHGYIDTEPEERERMFSCQEPLVRKFG 149


>gi|171912516|ref|ZP_02927986.1| hypothetical protein VspiD_15090 [Verrucomicrobium spinosum DSM
           4136]
          Length = 141

 Score = 96.3 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 46/106 (43%), Gaps = 13/106 (12%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+  V      I  ++ ++     PT+V++F               G+I+++ +  + +A
Sbjct: 46  EVDFVLVSDRTIAKVHGDFLDDPTPTDVITF-------------HHGEILISLDTAQKQA 92

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
               + ++  +   ++HG LHL G+   +  +   M  ++  IL+ 
Sbjct: 93  ADHNESYDREVARYMVHGLLHLAGWSDYEPAERTEMHRIQEEILDA 138


>gi|190570991|ref|YP_001975349.1| conserved hypothetical protein TIGR00043 [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213019508|ref|ZP_03335314.1| hypothetical protein C1A_162 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238058883|sp|B3CLC0|RRMF_WOLPP RecName: Full=Probable rRNA maturation factor
 gi|190357263|emb|CAQ54687.1| conserved hypothetical protein TIGR00043 [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212994930|gb|EEB55572.1| hypothetical protein C1A_162 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|222825043|dbj|BAH22201.1| hypothetical protein [Wolbachia endosymbiont of Cadra cautella]
          Length = 152

 Score = 96.3 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           L++++ +  W    H  T     F   + N   K   +      +S+   D + +  LN 
Sbjct: 2   LEVSILDKRW----HSITKDPQSFVLNIINASLKELKIDHYKPNISIALADDNLLHQLNL 57

Query: 73  EYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132
           ++R IDKPTNVLSFP    SS+      LGDI +A + IE E++        H  H+++H
Sbjct: 58  KFREIDKPTNVLSFPCEQLSSECD----LGDIAIAVDTIERESHEYCISILTHTAHMLVH 113

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           G LHLLGYDH  + +  +M+ LE  IL  L
Sbjct: 114 GLLHLLGYDHQKEDEEIIMKSLESKILALL 143


>gi|258405852|ref|YP_003198594.1| hypothetical protein Dret_1732 [Desulfohalobium retbaense DSM 5692]
 gi|257798079|gb|ACV69016.1| protein of unknown function UPF0054 [Desulfohalobium retbaense DSM
           5692]
          Length = 144

 Score = 96.3 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
            +  G  +  +   L +  T    I  LN  Y G   PTNVLSFP  +           G
Sbjct: 33  AVQIGNILGLSTASLDIRITTDFGIAGLNARYLGCVGPTNVLSFPNEYGG---------G 83

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
            +VL  + +  EA +  ++   H V L+ HG LHL G DH    DA     +E++
Sbjct: 84  SLVLNAQAVAREAWLYAQDPLEHWVRLVAHGLLHLYGLDHGPAMDAATETAVEQA 138


>gi|256419792|ref|YP_003120445.1| hypothetical protein Cpin_0746 [Chitinophaga pinensis DSM 2588]
 gi|256034700|gb|ACU58244.1| protein of unknown function UPF0054 [Chitinophaga pinensis DSM
           2588]
          Length = 140

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
           VF     +  +N ++   D  T++++F            +  G+I ++ + +   A    
Sbjct: 41  VFCSDEYLLEINQQFLQHDTLTDIVTFEMGEDPD-----VTEGEIYISVDRVRENAEKFK 95

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              E  L  +I HG LHL GY       +  M  +E   LE  
Sbjct: 96  VTEEQELHRVIFHGALHLCGYKDKTKDQSAKMRQMENQCLEQY 138


>gi|167753840|ref|ZP_02425967.1| hypothetical protein ALIPUT_02125 [Alistipes putredinis DSM 17216]
 gi|167658465|gb|EDS02595.1| hypothetical protein ALIPUT_02125 [Alistipes putredinis DSM 17216]
          Length = 148

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 58/141 (41%), Gaps = 6/141 (4%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           + D+   R   + + A  +  +  +  +    + +++ +F  + R+  +N ++ G D  T
Sbjct: 6   YTDDCTYRLPQKRLTAAWLDRVAREEGY---ELGDVTYIFCSAARLLDMNRQFLGHDYYT 62

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           +V++F     S    + ++ GDI +  E +   A   G      +  +++HG LHL G  
Sbjct: 63  DVITFDY---SDRKGARIVSGDIFIDVETVADNAREYGAAKLTEMRRVVVHGLLHLCGQK 119

Query: 142 HVDDKDACVMEGLERSILEDL 162
               +    M   E   L   
Sbjct: 120 DKTPRANAQMHRKEDHYLRQW 140


>gi|193212442|ref|YP_001998395.1| hypothetical protein Cpar_0779 [Chlorobaculum parvum NCIB 8327]
 gi|238692633|sp|B3QMP2|RRMF_CHLP8 RecName: Full=Probable rRNA maturation factor
 gi|193085919|gb|ACF11195.1| protein of unknown function UPF0054 [Chlorobaculum parvum NCIB
           8327]
          Length = 141

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 9/134 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           RT+ E + A+A+  +I +       +  +  ++  +  I  +N ++   D  T+ ++F  
Sbjct: 11  RTIDEALLAEAIQLVIGEEGG---KVGSIEAIYCGNKMIRRINRDFLNHDYATDTITFGY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                      + G+  ++ ++IE  A   G  FE+ L+ + IH  LHL+GYD    +  
Sbjct: 68  NE------GGEVEGEFYISLDVIESNARRFGVMFEDELLRVTIHSALHLMGYDDETPELR 121

Query: 149 CVMEGLERSILEDL 162
             M   E   L+ +
Sbjct: 122 IAMSRREDLYLDRI 135


>gi|332704887|ref|ZP_08424975.1| metalloprotease ybeY [Desulfovibrio africanus str. Walvis Bay]
 gi|332555036|gb|EGJ52080.1| metalloprotease ybeY [Desulfovibrio africanus str. Walvis Bay]
          Length = 157

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 17/117 (14%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCS------------SLMLGDIVL 106
           L   D   I   N  + G   PTNVLSFP     ++                  LG+IVL
Sbjct: 44  LHLVDDADIARRNAAFMGCVGPTNVLSFPAGSGDTEETDVADVADVFEEGQDHWLGEIVL 103

Query: 107 AYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           + + +E EA + G++   HLV L+ H  LHL G+DH       +M+ L    +E LG
Sbjct: 104 SVDTLEREAFLYGQQPREHLVRLLAHAVLHLAGHDHG-----EIMDALTEQAVEALG 155


>gi|299139982|ref|ZP_07033152.1| protein of unknown function UPF0054 [Acidobacterium sp. MP5ACTX8]
 gi|298597982|gb|EFI54150.1| protein of unknown function UPF0054 [Acidobacterium sp. MP5ACTX8]
          Length = 192

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 27/153 (17%)

Query: 25  EIHLRTLCEVVFAKA-VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           E       E+  ++A +   +           E+ ++ +D   +  LN E+RG DK T+V
Sbjct: 11  EASADPWGELGLSRAGLGRFVRTAQAAVGLRGEVEVLLSDDRTLRRLNREFRGKDKATDV 70

Query: 84  LSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV----------HLIIHG 133
           LSFP            + GD+ ++ +    +A   G    + +           +     
Sbjct: 71  LSFPA----PPELEGQLAGDLAISLDTALKQAQEQGHTLRDEVRVLLLHGLLHLY----- 121

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGIND 166
                G DH  D+    M   E  +   L + +
Sbjct: 122 -----GMDHEVDE--GEMAAREAVLRTQLRLRN 147


>gi|239917734|ref|YP_002957292.1| conserved hypothetical protein TIGR00043 [Micrococcus luteus NCTC
           2665]
 gi|281413771|ref|ZP_06245513.1| hypothetical protein MlutN2_00957 [Micrococcus luteus NCTC 2665]
 gi|259645756|sp|C5CCC6|RRMF_MICLC RecName: Full=Probable rRNA maturation factor
 gi|239838941|gb|ACS30738.1| conserved hypothetical protein TIGR00043 [Micrococcus luteus NCTC
           2665]
          Length = 157

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E+ +   E  L  +   V+A+                 E ++   D+ R+  L
Sbjct: 1   MAVEILNESGIEVPEDALLRMARHVYAR----------LHVHERAETAVTVVDAARMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           + E+  +  PT+V+S P       S +  +  +LGD+VL  E+   +A   G   ++ L+
Sbjct: 51  HEEWMDLPGPTDVMSLPMDELTPGSPEAPAEGVLGDVVLCPEVAAEQAARGGHSRDDELL 110

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDP 167
            L+ HG LHLLGYDHV+D +   M  L+  ++ + LG   P
Sbjct: 111 LLLTHGMLHLLGYDHVEDAEREEMFTLQDRLVSEVLGRPAP 151


>gi|297621266|ref|YP_003709403.1| hypothetical protein wcw_1038 [Waddlia chondrophila WSU 86-1044]
 gi|297376567|gb|ADI38397.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
          Length = 153

 Score = 94.7 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 3/107 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E+S+ F D+  I  L+  +      T+ +SFP            +LG++ +  +     A
Sbjct: 36  EVSIQFVDTQMICDLHHRFFNDPTVTDCISFPI--DQDGDTGYRVLGEVFVCPKTGIDYA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
               K     +   IIHG LHL+GYD + + +   M   E+  L  L
Sbjct: 94  QEHLKNPYEEISLYIIHGLLHLMGYDDIGEDEPR-MREAEKRHLAHL 139


>gi|225156450|ref|ZP_03724786.1| protein of unknown function UPF0054 [Opitutaceae bacterium TAV2]
 gi|224802958|gb|EEG21204.1| protein of unknown function UPF0054 [Opitutaceae bacterium TAV2]
          Length = 179

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ELSL F     +  L+ ++      T+V++F     ++ G  S   G+I ++ +     A
Sbjct: 50  ELSLAFLSDAALARLHADFLDDPTTTDVITF----EATPGMGSA--GEICVSVDTAARYA 103

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              G +F   L   I+HG+LHL GYD +       M   E+  +  L
Sbjct: 104 REHGHDFAEELALYIVHGWLHLAGYDDLQPMKKRRMRAAEKRAIALL 150


>gi|313813039|gb|EFS50753.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL025PA1]
 gi|327330796|gb|EGE72542.1| putative metalloprotease [Propionibacterium acnes HL097PA1]
          Length = 155

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 14/154 (9%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I  E+    +E  L  L                +       ELS++  D   +E  + 
Sbjct: 2   IDITNESGSPSNEEGLVGLATFALD----------WLRIHPSSELSIILVDEETMEAYHE 51

Query: 73  EYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           ++ G+  PT+VLSFP          +   S +LGDIVL   +   +A   G+  +    +
Sbjct: 52  KFMGLPGPTDVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVTARQAAENGRTPDGEAEY 111

Query: 129 LIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L+IHG LHLLGYDH +  +  VM  L   I+   
Sbjct: 112 LLIHGLLHLLGYDHAEPGEKRVMFRLNDEIIAAW 145


>gi|296122481|ref|YP_003630259.1| hypothetical protein Plim_2234 [Planctomyces limnophilus DSM 3776]
 gi|296014821|gb|ADG68060.1| protein of unknown function UPF0054 [Planctomyces limnophilus DSM
           3776]
          Length = 163

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 57/143 (39%), Gaps = 20/143 (13%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +D++I        D   + ++        + ++     F +    E+S+   D+ +I  
Sbjct: 1   MIDIEIT-------DHQSIASIDPKPIQTLLKHVFETEGFPE---AEISIALVDNQQIHK 50

Query: 70  LNFEYRGIDKPTNVLSFPTAFASS----------DGCSSLMLGDIVLAYEIIEIEANVLG 119
           +N ++   D PT+V+SF    +                  ++G+++++ E     A    
Sbjct: 51  VNRDFLNHDYPTDVISFVLNGSEDSVSHNHDHADPDFPEPLIGEVIVSVETAAGMAAENN 110

Query: 120 KEFENHLVHLIIHGFLHLLGYDH 142
               + ++   +HG LHL GYD 
Sbjct: 111 WCIASEVLLYCLHGSLHLCGYDD 133


>gi|86144117|ref|ZP_01062454.1| hypothetical protein MED217_18401 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829379|gb|EAQ47844.1| hypothetical protein MED217_18401 [Leeuwenhoekiella blandensis
           MED217]
          Length = 137

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 7/124 (5%)

Query: 38  KAVSNLISKGYFVKENIVE-LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
           + V + +      +   ++ L  VF     +  +N ++   D  T++++F          
Sbjct: 16  ERVESWLKAAALKESYGIDSLGYVFCSDDFLLEINQQFLDHDTLTDIVTFDYTE------ 69

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            +++ G+I ++ + +   A     +F+  L  +IIHG LH+ GY    D +   M   E 
Sbjct: 70  GTILNGEIYISTDRVADNAKDFNVDFDTELRRVIIHGLLHMCGYGDKTDDEKSNMRKKED 129

Query: 157 SILE 160
             L 
Sbjct: 130 EYLA 133


>gi|313206593|ref|YP_004045770.1| hypothetical protein Riean_1103 [Riemerella anatipestifer DSM
           15868]
 gi|312445909|gb|ADQ82264.1| protein of unknown function UPF0054 [Riemerella anatipestifer DSM
           15868]
 gi|315022088|gb|EFT35117.1| predicted metal-dependent hydrolase [Riemerella anatipestifer
           RA-YM]
 gi|325335965|gb|ADZ12239.1| uncharacterized protein family UPF0054 [Riemerella anatipestifer
           RA-GD]
          Length = 137

 Score = 94.3 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 57/121 (47%), Gaps = 9/121 (7%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
            +K +  +I   +   + + +++ +F D   +  +N ++   D  T++++F     ++  
Sbjct: 18  ISKWLEQIILSEH---KKLGKINYIFCDDEYLLKINQDHLQHDYYTDIITFDYVRGNTIS 74

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
                 GDI ++   I   A+ L K++++  + ++ HG LHL GY    ++D   M   E
Sbjct: 75  ------GDIFVSLPRISDNASTLSKDYQSEFLRVLAHGVLHLCGYKDKTEEDIKEMRNKE 128

Query: 156 R 156
            
Sbjct: 129 D 129


>gi|17061813|gb|AAK74139.1| C21orf57 isoform B protein [Homo sapiens]
 gi|119629700|gb|EAX09295.1| chromosome 21 open reading frame 57, isoform CRA_g [Homo sapiens]
          Length = 256

 Score = 94.3 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 37/111 (33%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
              +L ++  D+  I+ +N  YR  + PT+VLSFP                         
Sbjct: 165 QKFDLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHE---------------------- 202

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
                              HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 203 ---------------VTATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 238


>gi|313157525|gb|EFR56943.1| translation metalloprotein YbeY [Alistipes sp. HGB5]
          Length = 143

 Score = 94.3 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++S +F  + R+  +N +Y G D  T+V++F     S    + ++ GDI +  E +   A
Sbjct: 37  DVSYIFCSAQRLLEMNRQYLGHDYFTDVITFDY---SDRKGARVISGDIFIDVETVADNA 93

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            + G      +  +++HG LHL G      +    M   E   L+
Sbjct: 94  RLYGFSTLQEMRRVVVHGVLHLCGQGDKTPRTNAQMHRKEDKYLK 138


>gi|309807569|ref|ZP_07701521.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           01V1-a]
 gi|308169175|gb|EFO71241.1| translation metalloprotein YbeY [Lactobacillus iners LactinV
           01V1-a]
          Length = 92

 Score = 94.0 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDD 145
           F     + D      +GD+ +  E++E  A      F     + ++HG+LHL GYDH+ D
Sbjct: 2   FAQFIETPDFVED--IGDLFICPEVVEKHATEYETGFYREFGYTLVHGYLHLNGYDHIKD 59

Query: 146 KDACVMEGLERSILEDLGIN 165
            +A VM G++  +LE+ G+ 
Sbjct: 60  DEAEVMFGIQSKVLEEYGLP 79


>gi|325286234|ref|YP_004262024.1| metalloprotease ybeY [Cellulophaga lytica DSM 7489]
 gi|324321688|gb|ADY29153.1| metalloprotease ybeY [Cellulophaga lytica DSM 7489]
          Length = 139

 Score = 94.0 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E     +    +   ++ +I+    +     +++ +F D   +  +N +Y   D  T+++
Sbjct: 7   ETDFSLIDNTKYIDWINRIIASEEHL---TGDINYIFCDDSYLLNINQQYLNHDTYTDII 63

Query: 85  SFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
           +F                DI ++ E ++  A     +F+  ++ ++ HG LHL GY    
Sbjct: 64  TFDYTDGKVISS------DIYISVERVKENAVDFKVDFDVEMLRVMAHGLLHLAGYKDKS 117

Query: 145 DKDACVMEGLERS 157
            ++A +M   E  
Sbjct: 118 TEEAALMRSKEEE 130


>gi|289704493|ref|ZP_06500929.1| metalloprotein, YbeY/ UPF0054family [Micrococcus luteus SK58]
 gi|289705007|ref|ZP_06501420.1| metalloprotein, YbeY/ UPF0054family [Micrococcus luteus SK58]
 gi|289558266|gb|EFD51544.1| metalloprotein, YbeY/ UPF0054family [Micrococcus luteus SK58]
 gi|289558785|gb|EFD52040.1| metalloprotein, YbeY/ UPF0054family [Micrococcus luteus SK58]
          Length = 157

 Score = 94.0 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 14/161 (8%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + ++I  E+ +   E  L  +   V+ +                 E ++   D+ R+  L
Sbjct: 1   MAVEILNESGIEVPEDALLRMARHVYTR----------LHVHERAETAVTVVDAARMAEL 50

Query: 71  NFEYRGIDKPTNVLSFPTAF---ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           + E+  +  PT+V+S P       S +  +  +LGD+VL  E+   +A   G   ++ L+
Sbjct: 51  HEEWMDLPGPTDVMSLPMDELTPGSPEAPAEGVLGDVVLCPEVAAEQAARGGHSRDDELL 110

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILED-LGINDP 167
            L+ HG LHLLGYDH++D D   M GL+  ++ + LG   P
Sbjct: 111 LLLTHGMLHLLGYDHLEDADREEMFGLQDRLVSEVLGRPAP 151


>gi|78189140|ref|YP_379478.1| hypothetical protein Cag_1173 [Chlorobium chlorochromatii CaD3]
 gi|123579746|sp|Q3ARE0|RRMF_CHLCH RecName: Full=Probable rRNA maturation factor
 gi|78171339|gb|ABB28435.1| Protein of unknown function UPF0054 [Chlorobium chlorochromatii
           CaD3]
          Length = 156

 Score = 93.6 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 37  AKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGC 96
            + +  +          I  ++ V+  +   + +N +Y   D PT+ ++F  +   +   
Sbjct: 16  KRLLQAIRMVVQGEGYEIATITGVYCGNRMSQRINRDYLNHDYPTDTITFCYSEGKAIE- 74

Query: 97  SSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
                G+  ++ ++I   A      FE  L+ + IH  LHL G +    ++   M+  E 
Sbjct: 75  -----GEFYISLDVIRCNARHFNVTFEEELLRVTIHSALHLTGMNDYLPEERVAMQAKED 129

Query: 157 SILEDL 162
             L+ L
Sbjct: 130 YYLQLL 135


>gi|313676469|ref|YP_004054465.1| hypothetical protein Ftrac_2379 [Marivirga tractuosa DSM 4126]
 gi|312943167|gb|ADR22357.1| protein of unknown function UPF0054 [Marivirga tractuosa DSM 4126]
          Length = 142

 Score = 93.6 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 2/127 (1%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
             K  + L          I EL+ +F     +  +N ++   D  T++++F    +++  
Sbjct: 18  LQKHKAWLKQLAKIYDHEIDELNYIFCSDKFLHKINVDFLDHDTYTDIITFDLKESTTGN 77

Query: 96  CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            +     DI ++ + +   A  L   F+  L  ++ HG LHL+G++   + D   M   E
Sbjct: 78  NAIES--DIFISIDRVTENAENLNLNFKEELARVMAHGLLHLIGFNDKSEADRQEMREAE 135

Query: 156 RSILEDL 162
              +E L
Sbjct: 136 NKAIELL 142


>gi|84688108|ref|ZP_01015961.1| hypothetical protein 1099457000212_RB2654_05425 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84663878|gb|EAQ10389.1| hypothetical protein RB2654_05425 [Rhodobacterales bacterium
           HTCC2654]
          Length = 127

 Score = 93.6 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 15/121 (12%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + + +  E+  W   + L  L E   A  ++ L   G        E++L+  D  RI  L
Sbjct: 1   MIVDVVYEDDRWV-ALGLEALAETACAATLAKLGIAG-------AEIALLACDDDRIAAL 52

Query: 71  NFEYRGIDKPTNVLSFPTAF-------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFE 123
           N E+R    PTNVLS+P+                 + LGDI +AY+    EA   GK   
Sbjct: 53  NTEFRDKPTPTNVLSWPSEERGADQPGGDPYPPEDMELGDIAIAYDTCAGEAAEAGKPMV 112

Query: 124 N 124
           +
Sbjct: 113 D 113


>gi|212550624|ref|YP_002308941.1| hypothetical protein CFPG_267 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229554235|sp|B6YQQ8|RRMF_AZOPC RecName: Full=Probable rRNA maturation factor
 gi|212548862|dbj|BAG83530.1| conserved hypothetical protein [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 139

 Score = 93.6 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
              ++   +  + +  ++       +   +++ +F  +  I  +N  Y   D  T++++F
Sbjct: 11  KFPSINRKITTRWIKQILID---YNKRAGDITCIFCSNDEILRINNFYLNHDCYTDIITF 67

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
             +         ++ GD+ +A ++I+  +      +   L  +IIHG LHL G++    K
Sbjct: 68  DYS------KGDIISGDLFIALDMIKYNSMKYNVNYFEELYRVIIHGILHLCGFNDKLIK 121

Query: 147 DACVMEGLERSILEDL 162
           D  VM   E   LE +
Sbjct: 122 DIKVMREGENRALEKI 137


>gi|110598628|ref|ZP_01386894.1| Protein of unknown function UPF0054 [Chlorobium ferrooxidans DSM
           13031]
 gi|110339740|gb|EAT58249.1| Protein of unknown function UPF0054 [Chlorobium ferrooxidans DSM
           13031]
          Length = 149

 Score = 93.6 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R + E + + AV  ++    F  +++V +   +  +  I+ +N E+ G D PT+ ++F  
Sbjct: 22  REVPEQLLSDAVLLVLETEEFTVDSVVGV---YCGNKMIQRINREFLGHDYPTDTVTFRY 78

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +            G+  ++ +++   A     +F   L+ + IH  LHL+GYD    ++ 
Sbjct: 79  SKDREVD------GEFYISLDVVRENAARFDADFLQELLRVTIHSALHLIGYDDQSPEER 132

Query: 149 CVMEGLERSILEDL 162
             M+  E   L  L
Sbjct: 133 AGMQEKEAFYLARL 146


>gi|189501732|ref|YP_001957449.1| hypothetical protein Aasi_0282 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|238692302|sp|B3ER68|RRMF_AMOA5 RecName: Full=Probable rRNA maturation factor
 gi|189497173|gb|ACE05720.1| hypothetical protein Aasi_0282 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 147

 Score = 93.6 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 14/148 (9%)

Query: 8   LPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRI 67
           +P+ ++   VE+      I  +     +    + N+I +       +V L+ +F   + +
Sbjct: 1   MPKANIYYFVED------IQFKLPNPKIITDWIHNVIQQENC---QLVNLNFIFCSDNFL 51

Query: 68  ETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
              N +Y   D  T+V++F  A          + G+I ++ E +   A     +F   L 
Sbjct: 52  HKKNLKYLQHDTLTDVITFSYAED-----QKNIEGEIYISIERVSDNATTYQIDFWQELY 106

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLE 155
            ++IHG LHLLGY+     +   M   E
Sbjct: 107 TVMIHGVLHLLGYNDETLLEQEEMRKKE 134


>gi|218961523|ref|YP_001741298.1| hypothetical protein CLOAM1232 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730180|emb|CAO81092.1| conserved hypothetical protein [Candidatus Cloacamonas
           acidaminovorans]
          Length = 154

 Score = 93.6 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 14/148 (9%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVL 84
           E+   T+      + ++ LI       E+  ++ +   DS  ++  N  YRG+++ T++L
Sbjct: 5   ELIGETIIPESEQEKIAELICSQE-DPEHSYQICVKTVDSETMKHYNKRYRGLNETTDIL 63

Query: 85  SF------PTAFASSDGCS-----SLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
           SF        A    D         + + DI++  + +  +     +  E     ++IHG
Sbjct: 64  SFITADLPACAIEERDEEDGFSAKPVRICDIIIDIKRLFQQ--KGIRTLEEEYRAVLIHG 121

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILED 161
            LHL+GYDH+   DA  M   E   L+ 
Sbjct: 122 LLHLVGYDHIRSADAEKMNKKEEYYLKQ 149


>gi|42522997|ref|NP_968377.1| metal-dependent hydrolase, putative [Bdellovibrio bacteriovorus
           HD100]
 gi|59799115|sp|Q6MMY3|RRMF_BDEBA RecName: Full=Probable rRNA maturation factor
 gi|39575202|emb|CAE79370.1| metal-dependent hydrolase, putative [Bdellovibrio bacteriovorus
           HD100]
          Length = 150

 Score = 93.6 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 11/153 (7%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           +++ I  E+        ++T  ++V  +     + K    +    EL+LVF D    + +
Sbjct: 1   MEVLIVNESKHAAPRKFIQTWMQLVVTELKRKKVLKAEQARR---ELTLVFLDKKPAQKI 57

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+RG +  T+VLSF       D      LG++VL  E+++ ++   G  ++  L +++
Sbjct: 58  NMEFRGKNYATDVLSF-------DSMDPGSLGELVLCPEVLKRQSKEHGLTYQQELGYML 110

Query: 131 IHGFLHLLGYDHVD-DKDACVMEGLERSILEDL 162
           +HG LHLLGYDH   + +A  M G++ +  E L
Sbjct: 111 LHGVLHLLGYDHETSEAEALEMFGIQDAAFEVL 143


>gi|218885681|ref|YP_002435002.1| hypothetical protein DvMF_0577 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756635|gb|ACL07534.1| protein of unknown function UPF0054 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 171

 Score = 93.6 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 56/149 (37%), Gaps = 24/149 (16%)

Query: 38  KAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF------- 90
           +AV   + +   +    VEL         I  LN  + G   PTN+LSFP          
Sbjct: 22  RAVFAAMQEATGLAGCTVELD--LVGDEEIARLNAAHLGCTGPTNILSFPAHDGGPHDGA 79

Query: 91  -------------ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
                           D  +   LG +VL+ +    E  + G+E   H + L+ HG  HL
Sbjct: 80  HASSPDRSHGGPHDGPDEDAPCHLGWLVLSLDTWRRECQLYGQEPVEHALRLLAHGLGHL 139

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIND 166
            GYDH  + D      LE     D G+ D
Sbjct: 140 AGYDHGPEMDEFTDAALEAG--RDAGLAD 166


>gi|196001605|ref|XP_002110670.1| hypothetical protein TRIADDRAFT_54920 [Trichoplax adhaerens]
 gi|190586621|gb|EDV26674.1| hypothetical protein TRIADDRAFT_54920 [Trichoplax adhaerens]
          Length = 174

 Score = 93.6 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 30  TLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID--KPTNVLSFP 87
            L   +F + V  L+      +    +++++     ++  +N  +   D    T++LSFP
Sbjct: 22  RLDVKLFDQHVQQLM---RLFELQQFDVAVLLIGQAKMAEINTRF-NPDAKGATDILSFP 77

Query: 88  TAFASSDGCS-------SLMLGDIVLAYEIIEIEANVLGKEFENH-LVHLIIHGFLHLLG 139
                    S          LGDI +  ++I        K      L   + HG  HLLG
Sbjct: 78  FHENLRASLSSKSILPWECDLGDIFICPKMI---CQRFDKSILQEQLPVYVTHGICHLLG 134

Query: 140 YDHVDDKDACVMEGLERSILEDLGINDPY 168
           Y H D+K    M   ER ILE     + Y
Sbjct: 135 YIHDDEKSQIEMHIKERDILEKFNRANGY 163


>gi|120602327|ref|YP_966727.1| hypothetical protein Dvul_1281 [Desulfovibrio vulgaris DP4]
 gi|120562556|gb|ABM28300.1| protein of unknown function UPF0054 [Desulfovibrio vulgaris DP4]
          Length = 162

 Score = 93.2 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 22/137 (16%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A W   I LR L   VFA        +G+       E+ L   D   I  +N E  G   
Sbjct: 12  AAWRLPIALRDLSG-VFAAMQCATGLEGF-------EVELTIADDALIAMINEEQLGCIG 63

Query: 80  PTNVLSFPTAFASSDGCSS--------------LMLGDIVLAYEIIEIEANVLGKEFENH 125
           PTN+LSFP      D  +                +LG +VL+ + +  EA + G+  + H
Sbjct: 64  PTNILSFPAYGDPPDYPADGMECGTGQDAHTSLPLLGSLVLSVDTLRREAFLYGQPVQEH 123

Query: 126 LVHLIIHGFLHLLGYDH 142
            + L+ HG  H+ GYDH
Sbjct: 124 CLRLLAHGLGHIAGYDH 140


>gi|119629697|gb|EAX09292.1| chromosome 21 open reading frame 57, isoform CRA_d [Homo sapiens]
          Length = 124

 Score = 92.8 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 37/111 (33%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
              +L ++  D+  I+ +N  YR  + PT+VLSFP                         
Sbjct: 33  QKFDLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHE---------------------- 70

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
                              HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 71  ---------------VTATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 106


>gi|46580292|ref|YP_011100.1| hypothetical protein DVU1883 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|62901440|sp|Q72AV7|RRMF_DESVH RecName: Full=Probable rRNA maturation factor
 gi|46449709|gb|AAS96359.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233726|gb|ADP86580.1| protein of unknown function UPF0054 [Desulfovibrio vulgaris RCH1]
          Length = 162

 Score = 92.8 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 22/137 (16%)

Query: 20  ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDK 79
           A W   I LR +   VFA        +G+       E+ L   D   I  +N E  G   
Sbjct: 12  AAWRLPIALRDISG-VFAAMQCATGLEGF-------EVELTIADDALIAMINEEQLGCIG 63

Query: 80  PTNVLSFPTAFASSDGCSS--------------LMLGDIVLAYEIIEIEANVLGKEFENH 125
           PTN+LSFP   A  D  +                +LG +VL+ + +  EA + G+  + H
Sbjct: 64  PTNILSFPAYGAPPDYPADGMECGTGQDAHTSLPLLGSLVLSVDTLRREAFLYGQPVQEH 123

Query: 126 LVHLIIHGFLHLLGYDH 142
            + L+ HG  H+ GYDH
Sbjct: 124 CLRLLAHGLGHIAGYDH 140


>gi|189499926|ref|YP_001959396.1| hypothetical protein Cphamn1_0971 [Chlorobium phaeobacteroides BS1]
 gi|238692296|sp|B3EPY3|RRMF_CHLPB RecName: Full=Probable rRNA maturation factor
 gi|189495367|gb|ACE03915.1| protein of unknown function UPF0054 [Chlorobium phaeobacteroides
           BS1]
          Length = 138

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 9/134 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R + E    + + ++I    FV + +V +   F     I+ +N E+ G D  T+ ++F  
Sbjct: 11  RVIPEEKLERVIRHVIEAEGFVPDVVVAV---FCGDRLIQRINREHLGHDYATDTITFRY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                        G+  ++ ++I+  +      FEN L  + IH  LHL GYD   D+  
Sbjct: 68  NSGREIE------GEFYVSLDVIDKNSRRFKTGFENELFRVAIHSALHLAGYDDSGDEAR 121

Query: 149 CVMEGLERSILEDL 162
             M+  E   L  L
Sbjct: 122 AGMKKREDRYLSQL 135


>gi|91215358|ref|ZP_01252329.1| hypothetical protein P700755_09598 [Psychroflexus torquis ATCC
           700755]
 gi|91186310|gb|EAS72682.1| hypothetical protein P700755_09598 [Psychroflexus torquis ATCC
           700755]
          Length = 143

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 6/114 (5%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L+S     ++ + EL+ VF     +  +N  Y   D  T++++F      S         
Sbjct: 25  LLSVIKSEQKTLGELTYVFCSDEYLLDINQSYLQHDTLTDIITFDYTEGDSISTE----- 79

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
            I ++ + ++  A   G +FE  L  ++ HG LH  GY  +  ++  +M   E 
Sbjct: 80  -IYISIDRVKENAEEFGVDFEKELKRVMAHGVLHCCGYKDLTQEEKDLMRAKEN 132


>gi|95929411|ref|ZP_01312154.1| protein of unknown function UPF0054 [Desulfuromonas acetoxidans DSM
           684]
 gi|95134527|gb|EAT16183.1| protein of unknown function UPF0054 [Desulfuromonas acetoxidans DSM
           684]
          Length = 157

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 14/145 (9%)

Query: 15  IAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEY 74
           I +EN     +I + T      AK + N +        +  ELS+V  D  +I+ +N +Y
Sbjct: 2   IYIENQQQNHDIPITTFKTA--AKTILNALE-----CPDDTELSVVIVDDDQIQEINRDY 54

Query: 75  RGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
              D PTNV+SF        G    +LGD+V++ +    +A   G  F + +  L+IHG 
Sbjct: 55  LQRDNPTNVISFAQQEGEGAGICPELLGDVVISADTAARDAAEAGVPFFSEMSFLLIHGI 114

Query: 135 LHLLGYDHV-------DDKDACVME 152
           LHLLGYDH         + +A   E
Sbjct: 115 LHLLGYDHERGTEEQATEMEAKERE 139


>gi|94264469|ref|ZP_01288257.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93455100|gb|EAT05324.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 440

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAY 108
           +   ELS++  D  R+  LN  YRG D+PTNVL+FP A    +   G    +LGDIV+A 
Sbjct: 75  QAAAELSILLVDEQRMGQLNAHYRGQDRPTNVLAFPQADHDREAAGGAGPRLLGDIVIAP 134

Query: 109 EIIEIEANVLGKEFENHLVH 128
            +   EA  LG   +  L  
Sbjct: 135 AVAAREARELGISRQRRLDW 154


>gi|255536700|ref|YP_003097071.1| predicted metal-dependent hydrolase [Flavobacteriaceae bacterium
           3519-10]
 gi|255342896|gb|ACU09009.1| predicted metal-dependent hydrolase [Flavobacteriaceae bacterium
           3519-10]
          Length = 142

 Score = 92.0 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 7/136 (5%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVK-ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
              + E+  +  +   +      + +    L+ VF     +  +N EY   D  T++++F
Sbjct: 13  FEDIDEIAISPEIKPWLENLLISEGKKPGVLNYVFCSDEYLLKINREYLDHDYLTDIITF 72

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
                        + GDI ++   I   A +    F+  L+ +  HG LHL GY    + 
Sbjct: 73  DYV------KGKTVSGDIFVSLHRISENALLHDNSFDTELLRVTAHGLLHLCGYKDKTEV 126

Query: 147 DACVMEGLERSILEDL 162
           +   M   E   +   
Sbjct: 127 EISEMRSKEDFYINQF 142


>gi|296113058|ref|YP_003626996.1| uncharacterized protein family (UPF0054) family protein [Moraxella
           catarrhalis RH4]
 gi|295920752|gb|ADG61103.1| uncharacterized protein family (UPF0054) family protein [Moraxella
           catarrhalis RH4]
 gi|326560434|gb|EGE10816.1| hypothetical protein E9G_05772 [Moraxella catarrhalis 7169]
 gi|326561638|gb|EGE11975.1| hypothetical protein E9K_08504 [Moraxella catarrhalis 103P14B1]
 gi|326562601|gb|EGE12912.1| hypothetical protein E9M_04866 [Moraxella catarrhalis 46P47B1]
 gi|326563589|gb|EGE13843.1| hypothetical protein E9O_08074 [Moraxella catarrhalis 12P80B1]
 gi|326565831|gb|EGE15993.1| hypothetical protein E9Q_09660 [Moraxella catarrhalis BC1]
 gi|326570486|gb|EGE20526.1| hypothetical protein E9U_03828 [Moraxella catarrhalis BC8]
 gi|326571169|gb|EGE21193.1| hypothetical protein E9S_05602 [Moraxella catarrhalis BC7]
 gi|326573460|gb|EGE23428.1| hypothetical protein E9Y_09446 [Moraxella catarrhalis 101P30B1]
 gi|326575642|gb|EGE25565.1| hypothetical protein E9W_01670 [Moraxella catarrhalis CO72]
 gi|326577106|gb|EGE27000.1| hypothetical protein EA1_04120 [Moraxella catarrhalis O35E]
          Length = 180

 Score = 92.0 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/155 (36%), Positives = 79/155 (50%), Gaps = 11/155 (7%)

Query: 25  EIHLRTLCEVVFAKAVSNLISKGYFVKENIV--------ELSLVFTDSHRIETLNFEYRG 76
           +I L  + E   +     L     FV              +S+   +  +   +N   RG
Sbjct: 23  DIDLNKIVETTLSIMTQKLHHGIDFVYFPDAIQIWHMPKSVSIYVVNHAQGRAVNLAARG 82

Query: 77  IDKPTNVLSFPTAFASSDG--CSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGF 134
            D  TNVLS+P+   +        + LG++VL +E++  EA+   K FE+HL HLIIHG 
Sbjct: 83  KDYATNVLSYPSELPTEMTTLLGEIELGELVLCHEVVLNEADEQNKSFESHLTHLIIHGL 142

Query: 135 LHLLGYDH-VDDKDACVMEGLERSILEDLGINDPY 168
           LHLLG+DH + D DA  MEG E  IL  LGI++PY
Sbjct: 143 LHLLGFDHEISDADADQMEGFEIEILAQLGIDNPY 177


>gi|94271344|ref|ZP_01291941.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450472|gb|EAT01646.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 440

 Score = 91.3 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD---GCSSLMLGDIVLAY 108
           +   ELS++  D  R+  LN  YRG D+PTNVL+FP A    +        +LGDIV+A 
Sbjct: 75  QAAAELSILLVDEQRMGQLNAHYRGQDRPTNVLAFPQADHDREAAGEAGPRLLGDIVIAP 134

Query: 109 EIIEIEANVLGKEFENHLVH 128
            +   EA  LG   +  L  
Sbjct: 135 AVAAREARELGISRQRRLDW 154


>gi|212703304|ref|ZP_03311432.1| hypothetical protein DESPIG_01347 [Desulfovibrio piger ATCC 29098]
 gi|212673264|gb|EEB33747.1| hypothetical protein DESPIG_01347 [Desulfovibrio piger ATCC 29098]
          Length = 143

 Score = 91.3 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 8/127 (6%)

Query: 22  WGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPT 81
           +     L  +     A+ +  L S        +  +     D   I   N  Y G   PT
Sbjct: 10  YPAGAWLLPVPPRQIARILDALTSAAREAGCPLGPVETHLVDDACIARANQRYMGCTGPT 69

Query: 82  NVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYD 141
           NVLSFP      +    +ML    L+ + +  E  + G++   HL+ L+ H   HL GYD
Sbjct: 70  NVLSFP----GDESLPGVML----LSLDTLNRECLLYGQDPAEHLLRLLAHSVGHLAGYD 121

Query: 142 HVDDKDA 148
           H ++ DA
Sbjct: 122 HGEEMDA 128


>gi|189347078|ref|YP_001943607.1| hypothetical protein Clim_1583 [Chlorobium limicola DSM 245]
 gi|238692156|sp|B3EDK3|RRMF_CHLL2 RecName: Full=Probable rRNA maturation factor
 gi|189341225|gb|ACD90628.1| protein of unknown function UPF0054 [Chlorobium limicola DSM 245]
          Length = 144

 Score = 91.3 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 9/138 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + L E +  + V +++    F  E+IV +   +     I  +N E+   D  T+ ++F  
Sbjct: 11  KELHEELLERTVIDVLDSEGFGVESIVAV---YCGKKMIRKINREFLQHDYATDTITFRY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
           +            G+  ++ ++IE  A     +F+  L+ + IH  LHL+GYD       
Sbjct: 68  SDNREID------GEFYISLDVIEENARRFEVDFKLELLRVTIHSALHLIGYDDQTVDGR 121

Query: 149 CVMEGLERSILEDLGIND 166
             M+  E   L      +
Sbjct: 122 LQMQQKEEFYLNRYSEAN 139


>gi|21674205|ref|NP_662270.1| hypothetical protein CT1383 [Chlorobium tepidum TLS]
 gi|62901450|sp|Q8KCN1|RRMF_CHLTE RecName: Full=Probable rRNA maturation factor
 gi|21647369|gb|AAM72612.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 137

 Score = 90.9 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 17/152 (11%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + LQI        DE  L  +  +V  +    + S           +  ++  +  I  +
Sbjct: 1   MPLQIFNTTKRTIDETLLAEVIRLVIGEEGGAVGS-----------IEAIYCGNKMIRRI 49

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N ++ G D  T+ ++F             + G+  ++ ++IE  A   G  FE+ L+ + 
Sbjct: 50  NRDFLGHDYVTDTITFGYNE------GGEVDGEFYISLDVIESNARRFGVSFEDELLRVT 103

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           IH  LHL+GYD    +    M   E   L  L
Sbjct: 104 IHSALHLMGYDDETSELRAAMSLREDHYLYRL 135


>gi|188585826|ref|YP_001917371.1| protein of unknown function UPF0054 [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350513|gb|ACB84783.1| protein of unknown function UPF0054 [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 141

 Score = 90.9 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 8/138 (5%)

Query: 36  FAKAVSNLISK-GYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS- 93
             K V   + K    +  +  E+ L+  D+  I+ LN +YR   K T+VLSFP       
Sbjct: 2   LTKIVETTLQKVKKEIANSPGEVGLMIVDAETIKELNRDYRNQYKSTDVLSFPQYQEDDL 61

Query: 94  ---DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACV 150
              D    L+LGDIV++   +  +A+  G   E  L  L +HG LHLLGYDH  ++    
Sbjct: 62  VERDSDDYLLLGDIVISESAVLDQADKYGHSIERELAFLFLHGLLHLLGYDHEKEEAQSE 121

Query: 151 ---MEGLERSILEDLGIN 165
              M  L+  IL  LGI 
Sbjct: 122 EESMFVLQEEILSSLGIT 139


>gi|194336788|ref|YP_002018582.1| protein of unknown function UPF0054 [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309265|gb|ACF43965.1| protein of unknown function UPF0054 [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 139

 Score = 90.9 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           + + E +  KAV  ++    F  E+IV +   +  +  I+ +N E+ G D PT+ ++F  
Sbjct: 10  KEIPEQLLEKAVLLVLENEGFTVESIVGV---YCGNKMIQRINREFLGHDYPTDTITFRY 66

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
              +         G+  ++ ++++  A     +F+  L+ + +H  LHL+GY     ++ 
Sbjct: 67  NKGAEID------GEFYISLDVVKENAARFSVDFQQELLRVTLHSALHLIGYGDQSAEER 120

Query: 149 CVMEGLERSILEDLG 163
            ++E  E   L   G
Sbjct: 121 RLIEEKEAFYLTRSG 135


>gi|330813322|ref|YP_004357561.1| metal-dependent hydrolase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486417|gb|AEA80822.1| metal-dependent hydrolase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 98

 Score = 90.1 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 10/100 (10%)

Query: 67  IETLNFEYRGIDKPTNVLSFPTAFASS------DGCSSLMLGDIVLAYEIIEIEANVLGK 120
           ++ LN ++R I K T+VLSFP    +          +++ LGD+  +Y+ I+ +      
Sbjct: 1   MKKLNKDFRRILKDTDVLSFPHHEKNFFLKRKLPTVNNIYLGDLAFSYDYIKKQ----KT 56

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILE 160
            F  ++  + IHG LHL+GY+H + K+   M  LER +L 
Sbjct: 57  NFVEYVNKIFIHGCLHLVGYEHDNLKNYKEMHSLERKLLA 96


>gi|153812738|ref|ZP_01965406.1| hypothetical protein RUMOBE_03145 [Ruminococcus obeum ATCC 29174]
 gi|149831098|gb|EDM86187.1| hypothetical protein RUMOBE_03145 [Ruminococcus obeum ATCC 29174]
          Length = 133

 Score = 90.1 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 22/140 (15%)

Query: 11  LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
           + +QI  E     D I    L   V  + +              V ++LV TD+  I+ +
Sbjct: 1   MTIQINYEAERKLD-IDYEKLASEVAEQILET------ENCPYDVCVNLVITDNEEIKRV 53

Query: 71  NFEYRGIDKPTNVLSFPTAFASSD---------------GCSSLMLGDIVLAYEIIEIEA 115
           N E+R I  PT+VLSFP     +                    L+LGD++++ + +  +A
Sbjct: 54  NTEFRSIGAPTDVLSFPMIPFKTPADYSVIEGDDSYFDLDTDELILGDVMISVDKVYAQA 113

Query: 116 NVLGKEFENHLVHLIIHGFL 135
              G   E     L  H  L
Sbjct: 114 EEYGHSTEREFSFLFAHSML 133


>gi|322436562|ref|YP_004218774.1| protein of unknown function UPF0054 [Acidobacterium sp. MP5ACTX9]
 gi|321164289|gb|ADW69994.1| protein of unknown function UPF0054 [Acidobacterium sp. MP5ACTX9]
          Length = 155

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 7/126 (5%)

Query: 40  VSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSL 99
           ++  +++         E+ ++ T    I+ LN  +RG +K T+VLSFP            
Sbjct: 21  LARFLNRAREAVGLDGEVEVLLTSDVEIKRLNKAFRGKNKATDVLSFPAPEEFEG----- 75

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           + GD+ ++ +    +A   G    + +  L++HG LHL G DH  D     M   E  + 
Sbjct: 76  VAGDLAVSLDTAAKQAAEHGHGLRDEVRILLLHGLLHLAGEDHETDS--GEMAAREAELR 133

Query: 160 EDLGIN 165
           ++LG+ 
Sbjct: 134 KELGLP 139


>gi|298711736|emb|CBJ32782.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 296

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 43/149 (28%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG--------CSSLMLGDIVLA 107
           ++  V T    +  LN +YRG+   T++LSFP    S            + + LGD+ ++
Sbjct: 139 DVGAVLTTDKEVFRLNRQYRGMSTSTDILSFPNHDMSGSPGVLPKVRFPAEMDLGDMFIS 198

Query: 108 YEIIEIE-----------------------------------ANVLGKEFENHLVHLIIH 132
              ++ +                                   A     + +     L++H
Sbjct: 199 LAYVDRQIKRDREEQAAAVAAAAAGGGGQEEEWWDSERGVSGAMSRVFDVQERASMLLVH 258

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILED 161
           G +HLLGYDH  + D   M  +E  +L  
Sbjct: 259 GLIHLLGYDHETESDYKAMVAVEEEVLRA 287


>gi|257063748|ref|YP_003143420.1| conserved hypothetical protein TIGR00043 [Slackia
           heliotrinireducens DSM 20476]
 gi|256791401|gb|ACV22071.1| conserved hypothetical protein TIGR00043 [Slackia
           heliotrinireducens DSM 20476]
          Length = 163

 Score = 89.0 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 14/115 (12%)

Query: 24  DEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNV 83
           D +H   L   V  + ++  +       EN  E+S+ F D   I+ LN EYRGIDKPT+V
Sbjct: 6   DVLHGEDLVSQVDVERLAEYVLTQEGCPEN-TEVSITFVDDEEIQRLNLEYRGIDKPTDV 64

Query: 84  LSFPTAFASSD-------------GCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           LSF       +                  +LGDI++A ++   +           
Sbjct: 65  LSFECDGYDDEFDDGDAYEDAGVPDDEPFLLGDIIIATDVANAQTAQFHTTPSEE 119


>gi|153005571|ref|YP_001379896.1| hypothetical protein Anae109_2711 [Anaeromyxobacter sp. Fw109-5]
 gi|166228436|sp|A7HDW6|RRMF_ANADF RecName: Full=Probable rRNA maturation factor
 gi|152029144|gb|ABS26912.1| protein of unknown function UPF0054 [Anaeromyxobacter sp. Fw109-5]
          Length = 192

 Score = 88.6 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 11/119 (9%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTA----FASSDGCSSLMLGDIV 105
           +     E+S++     RI  LN E+RG D  T+VLSFP +           S  +LGD+V
Sbjct: 30  LGRADAEISILLVGDRRIRALNREWRGKDAATDVLSFPLSEPPG-------SGPLLGDVV 82

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           ++ +     A    +     L   + HG LHLLGYDH    DA  M   E  +    G+
Sbjct: 83  ISLDTAARRARQERRAVGAELDRYLAHGLLHLLGYDHERPADARRMARKEAELARAEGL 141


>gi|50842421|ref|YP_055648.1| putative metalloprotease [Propionibacterium acnes KPA171202]
 gi|282854119|ref|ZP_06263456.1| metalloprotein, YbeY/ UPF0054family [Propionibacterium acnes J139]
 gi|59799026|sp|Q6A976|RRMF_PROAC RecName: Full=Probable rRNA maturation factor
 gi|50840023|gb|AAT82690.1| conserved protein [Propionibacterium acnes KPA171202]
 gi|282583572|gb|EFB88952.1| metalloprotein, YbeY/ UPF0054family [Propionibacterium acnes J139]
 gi|314923094|gb|EFS86925.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL001PA1]
 gi|314966863|gb|EFT10962.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL082PA2]
 gi|314981205|gb|EFT25299.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL110PA3]
 gi|315091776|gb|EFT63752.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL110PA4]
 gi|315093216|gb|EFT65192.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL060PA1]
 gi|315103280|gb|EFT75256.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL050PA2]
 gi|315105485|gb|EFT77461.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL030PA1]
          Length = 155

 Score = 88.2 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I  E+    +E  L  L      +                 ELS++  D   +E  + 
Sbjct: 2   IDITNESGSPSNEEGLVGLATFALDR----------LRIHPSSELSIILVDEETMEAYHE 51

Query: 73  EYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           ++ G+  PT+VLSFP          +   S +LGDIVL   +   +A   G+  +  
Sbjct: 52  KFMGLPGPTDVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVTARQAAENGRTPDGE 108


>gi|225010333|ref|ZP_03700805.1| protein of unknown function UPF0054 [Flavobacteria bacterium
           MS024-3C]
 gi|225005812|gb|EEG43762.1| protein of unknown function UPF0054 [Flavobacteria bacterium
           MS024-3C]
          Length = 148

 Score = 88.2 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 6/115 (5%)

Query: 43  LISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
           L+        ++  LS +F +   +  LN  Y   D  T++++F           +++ G
Sbjct: 31  LLKVAESEGYSVAALSYIFCNDQYLLELNQSYLSHDTFTDIITFDYVE------GTIISG 84

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           DI ++ + +E  A +    FE   + ++ HG LHL+GY     +D  VM   E  
Sbjct: 85  DIFISVDRLEENAAIFKVSFEEERLRVMAHGLLHLMGYKDKSAEDQLVMSNKENE 139


>gi|320106115|ref|YP_004181705.1| hypothetical protein AciPR4_0878 [Terriglobus saanensis SP1PR4]
 gi|319924636|gb|ADV81711.1| protein of unknown function UPF0054 [Terriglobus saanensis SP1PR4]
          Length = 156

 Score = 87.8 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 27/120 (22%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           +++++  D  R++ LN  +R  +K T+VLSFP    S +     + GD+ ++ +  E +A
Sbjct: 35  DVTVLLADDARVKDLNRTFRKKNKATDVLSFPAGEGSDE-----IAGDLAISLDTAEKQA 89

Query: 116 NVLGKEFENHLVHLII----------HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
              G    + +  L +          H            + D   M   E  +   L + 
Sbjct: 90  ESFGHTLYDEVRVLTLHGLLHLAGLDH------------EIDKGEMAAKELELRTKLELP 137


>gi|194334312|ref|YP_002016172.1| hypothetical protein Paes_1505 [Prosthecochloris aestuarii DSM 271]
 gi|238693340|sp|B4S8Y8|RRMF_PROA2 RecName: Full=Probable rRNA maturation factor
 gi|194312130|gb|ACF46525.1| protein of unknown function UPF0054 [Prosthecochloris aestuarii DSM
           271]
          Length = 141

 Score = 87.4 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 9/132 (6%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R + E    + +  ++     V E   +L+ V+  +     +N E+   D PT+ ++F  
Sbjct: 11  RDIPEQKLMQVIEGVLGAEGLVIE---DLTAVYCGNRLSRRINCEFLQHDYPTDTITFRY 67

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
               +      + G++ ++ +I+   A      F + L  + IH  LHL G++    ++ 
Sbjct: 68  NDGEA------VEGELYISLDIVAENAQRFNVSFTDELFRVTIHSALHLAGFEDTSVEER 121

Query: 149 CVMEGLERSILE 160
             M+  E   L 
Sbjct: 122 ASMKDKEDHYLN 133


>gi|327327688|gb|EGE69464.1| putative metalloprotease [Propionibacterium acnes HL103PA1]
          Length = 155

 Score = 87.4 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I  E+    +E  L  L      +                 ELS++  D   +E  + 
Sbjct: 2   IDITNESGSPSNEEGLVGLATFALDR----------LRIHPSSELSIILVDEETMEAYHE 51

Query: 73  EYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           ++ G+  PT+VLSFP          +   S +LGDIVL   +   +A   G+  +  
Sbjct: 52  KFMGLPGPTDVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVTARQAAENGRTSDGE 108


>gi|313792245|gb|EFS40346.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL110PA1]
 gi|315078119|gb|EFT50170.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL053PA2]
 gi|327453040|gb|EGE99694.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL092PA1]
          Length = 155

 Score = 87.0 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I  E+    +E  L  L                +       ELS++  D   +E  + 
Sbjct: 2   IDITNESGSPSNEEGLVGLATFALD----------WLRIHPSSELSIILVDEETMEAYHE 51

Query: 73  EYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           ++ G+  PT+VLSFP          +   S +LGDIVL   +   +A   G+  +  
Sbjct: 52  KFMGLPGPTDVLSFPMDEMRVPGDDEDPPSGLLGDIVLCPTVTARQAAENGRTPDGE 108


>gi|289425171|ref|ZP_06426948.1| metalloprotein, YbeY family [Propionibacterium acnes SK187]
 gi|289427200|ref|ZP_06428916.1| metalloprotein, YbeY family [Propionibacterium acnes J165]
 gi|295130497|ref|YP_003581160.1| metalloprotein, YbeY family [Propionibacterium acnes SK137]
 gi|289154149|gb|EFD02837.1| metalloprotein, YbeY family [Propionibacterium acnes SK187]
 gi|289159669|gb|EFD07857.1| metalloprotein, YbeY family [Propionibacterium acnes J165]
 gi|291376558|gb|ADE00413.1| metalloprotein, YbeY family [Propionibacterium acnes SK137]
 gi|313764557|gb|EFS35921.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL013PA1]
 gi|313772405|gb|EFS38371.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL074PA1]
 gi|313801806|gb|EFS43040.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL110PA2]
 gi|313807415|gb|EFS45902.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL087PA2]
 gi|313809923|gb|EFS47644.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL083PA1]
 gi|313816098|gb|EFS53812.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL059PA1]
 gi|313818461|gb|EFS56175.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL046PA2]
 gi|313820224|gb|EFS57938.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL036PA1]
 gi|313822967|gb|EFS60681.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL036PA2]
 gi|313825105|gb|EFS62819.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL063PA1]
 gi|313827673|gb|EFS65387.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL063PA2]
 gi|313830254|gb|EFS67968.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL007PA1]
 gi|313834055|gb|EFS71769.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL056PA1]
 gi|313838632|gb|EFS76346.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL086PA1]
 gi|314915553|gb|EFS79384.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL005PA4]
 gi|314918493|gb|EFS82324.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL050PA1]
 gi|314919980|gb|EFS83811.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL050PA3]
 gi|314925452|gb|EFS89283.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL036PA3]
 gi|314931993|gb|EFS95824.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL067PA1]
 gi|314955862|gb|EFT00262.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL027PA1]
 gi|314958343|gb|EFT02446.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL002PA1]
 gi|314960102|gb|EFT04204.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL002PA2]
 gi|314962904|gb|EFT07004.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL082PA1]
 gi|314968019|gb|EFT12118.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL037PA1]
 gi|314973260|gb|EFT17356.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL053PA1]
 gi|314975935|gb|EFT20030.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL045PA1]
 gi|314978308|gb|EFT22402.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL072PA2]
 gi|314984047|gb|EFT28139.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL005PA1]
 gi|314987810|gb|EFT31901.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL005PA2]
 gi|314990031|gb|EFT34122.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL005PA3]
 gi|315080748|gb|EFT52724.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL078PA1]
 gi|315084418|gb|EFT56394.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL027PA2]
 gi|315085758|gb|EFT57734.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL002PA3]
 gi|315088824|gb|EFT60800.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL072PA1]
 gi|315096172|gb|EFT68148.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL038PA1]
 gi|315098434|gb|EFT70410.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL059PA2]
 gi|315101209|gb|EFT73185.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL046PA1]
 gi|315108431|gb|EFT80407.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL030PA2]
 gi|327326089|gb|EGE67879.1| putative metalloprotease [Propionibacterium acnes HL096PA2]
 gi|327332040|gb|EGE73777.1| putative metalloprotease [Propionibacterium acnes HL096PA3]
 gi|327443243|gb|EGE89897.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL013PA2]
 gi|327446029|gb|EGE92683.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL043PA2]
 gi|327447993|gb|EGE94647.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL043PA1]
 gi|327450883|gb|EGE97537.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL087PA3]
 gi|327453768|gb|EGF00423.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL083PA2]
 gi|328753570|gb|EGF67186.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL020PA1]
 gi|328754303|gb|EGF67919.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL087PA1]
 gi|328754445|gb|EGF68061.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL025PA2]
 gi|328760410|gb|EGF73978.1| putative metalloprotease [Propionibacterium acnes HL099PA1]
 gi|332675333|gb|AEE72149.1| putative metal-dependent hydrolase [Propionibacterium acnes 266]
          Length = 155

 Score = 87.0 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I  E+    +E  L  L                +       ELS++  D   +E  + 
Sbjct: 2   IDITNESGSPSNEEGLVGLATFALD----------WLRIHPSSELSIILVDEETMEAYHE 51

Query: 73  EYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           ++ G+  PT+VLSFP          +   S +LGDIVL   +   +A   G+  +  
Sbjct: 52  KFMGLPGPTDVLSFPMDEMRAPGDDEDPPSGLLGDIVLCPTVTARQAAENGRTPDGE 108


>gi|305665799|ref|YP_003862086.1| hypothetical protein FB2170_05900 [Maribacter sp. HTCC2170]
 gi|88710565|gb|EAR02797.1| hypothetical protein FB2170_05900 [Maribacter sp. HTCC2170]
          Length = 140

 Score = 87.0 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++ +F +   +  +N ++   D  T++++F           +++ GD+ ++ E IE  A 
Sbjct: 36  INFIFCEDDYLLKVNQQHLKHDYFTDIITFDYTD------GNIVSGDVFISTERIEENAG 89

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
           + G  F   L+ ++ HG LHLLGY+   + +   M   E  
Sbjct: 90  LFGVNFNTELLRVMSHGILHLLGYNDKSEDEVIKMRAKEEE 130


>gi|261749198|ref|YP_003256883.1| hypothetical protein BPLAN_108 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497290|gb|ACX83740.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 137

 Score = 86.6 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 7/103 (6%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           ++ +F + H +  LN +Y   D  T+V++F  +          + GD+ ++ + +   + 
Sbjct: 37  INYIFCNDHYLLNLNKKYLQKDYYTDVIAFAYS-----STPPNISGDVFISIDRVLENSQ 91

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              + F+  L  ++IH  LH LGY   D  +  +M+  E   L
Sbjct: 92  QWNQLFQVELKRVMIHAILHFLGY--EDRINEKLMKKKEEFYL 132


>gi|145559544|sp|P75209|RRMF_MYCPN RecName: Full=Probable rRNA maturation factor
          Length = 154

 Score = 86.3 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 11/141 (7%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELS------LVFTDSHRIETLNFEYRGIDK 79
           I+   L +  F K     I     + ++ ++LS      L+     +++ LN ++     
Sbjct: 7   INSNYLFKRFFGKNFEAGIELCLQIIKDSLQLSFQPEFALMIVSPWKMKRLNRQFLNRKG 66

Query: 80  PTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLG 139
            T+V+S    +  ++   S  +G+I L  + I  +A   G      L   +IHG LHL  
Sbjct: 67  VTDVIS--ICYNENEAGFSPAIGEIFLCPKHIFKQAKQFGCTPWFLLTRNLIHGLLHLFE 124

Query: 140 YDHVDD--KDACVMEGLERSI 158
           +DH      ++  M   +  I
Sbjct: 125 FDHEQSLAFESVTMF-FQDEI 144


>gi|221505230|gb|EEE30884.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 772

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 68/217 (31%), Gaps = 75/217 (34%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E  +  DE     L E + A+  S ++     +      +S+ F D+ ++  LN   R  
Sbjct: 233 EVTVDRDEELPSPLDEGLLARQASAVLE---LLGLRAFSVSVHFLDAEKMTQLNRAKRNT 289

Query: 78  DKPTNVLSFPTAFA---------------------------------------------S 92
           + PT+VL+FP+                                                 
Sbjct: 290 NAPTDVLAFPSRSPTVYRRLRSFLTQLSLPRQSETGESGDAATPAKETSEDWEASSTLIP 349

Query: 93  SDGCSSLMLGDIVLA-------YEIIEIEANVLGKEFE--------------------NH 125
               + L LG++           +    EA +L +                         
Sbjct: 350 LRSPADLSLGEVFFCSSAIQDAIDADRREAEILAESGRPCVHLGSGIKDLLKPRLSVPER 409

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  L IH  LHLLG+DH ++ DA  ME +E ++    
Sbjct: 410 LPLLFIHAVLHLLGFDHEEEGDAREMEAVEEALFARF 446


>gi|119629695|gb|EAX09290.1| chromosome 21 open reading frame 57, isoform CRA_c [Homo sapiens]
          Length = 122

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
            F   D      LGDI L  E I  +     +++ + L     HG  HLLG+ H  + + 
Sbjct: 31  EFPQPDFPDDYNLGDIFLGVEYIFHQCKE-NEDYNDVLTVTATHGLCHLLGFTHGTEAEW 89

Query: 149 CVMEGLERSILEDLG 163
             M   E+++L++LG
Sbjct: 90  QQMFQKEKAVLDELG 104


>gi|84999364|ref|XP_954403.1| hypothetical protein [Theileria annulata]
 gi|65305401|emb|CAI73726.1| hypothetical protein, conserved [Theileria annulata]
          Length = 524

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 20/126 (15%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLS-----------FPTAFASSDGCSSLMLGDIV 105
           L +   D   ++ +NFE  G +KPT+++S           F    +         LG+I 
Sbjct: 386 LDIFIEDEKNMKRINFEQFGGNKPTDIISLRDDLLYLKSDFHKNRSPLKPPEHYHLGEIF 445

Query: 106 LAYEIIEIE-------ANVLG--KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
           +   +IE E       A  +    +    +  ++ HG LHLLGYDH   +    M  +E 
Sbjct: 446 ICPGVIESENMIRGGVAARMKGISDINIRMCFIMAHGILHLLGYDHEKAEWFREMAEMED 505

Query: 157 SILEDL 162
           ++L++ 
Sbjct: 506 ALLDEF 511


>gi|260655935|ref|ZP_05861404.1| putative metalloprotease [Jonquetella anthropi E3_33 E1]
 gi|260629551|gb|EEX47745.1| putative metalloprotease [Jonquetella anthropi E3_33 E1]
          Length = 171

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 33/132 (25%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-----SDGCSSLMLGDIVLA 107
           + +E+SL F D   +  LN +YRG ++PT+VLSFP                L LGD+V  
Sbjct: 46  DELEISLQFLDEEAMAALNGQYRGENRPTDVLSFPLWENDGHLELPPSGGVLPLGDLVFC 105

Query: 108 YEIIEIEANVLGKEFENH------------LVHLIIHGFLHLLGYDHVDDKDACVMEGLE 155
             ++E  A   G   ++             +             +DH  ++    M  ++
Sbjct: 106 RPVLEANAAAAGTSVQSELALLLAHGALHLIA------------WDHDTEERRAAMWAVQ 153

Query: 156 R----SILEDLG 163
                 ILE  G
Sbjct: 154 ERYRQRILERAG 165


>gi|71654855|ref|XP_816039.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881140|gb|EAN94188.1| hypothetical protein, conserved [Trypanosoma cruzi]
 gi|322822620|gb|EFZ28616.1| hypothetical protein TCSYLVIO_5140 [Trypanosoma cruzi]
          Length = 207

 Score = 85.1 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 38/162 (23%)

Query: 39  AVSNLISKGYFVK--ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS----------- 85
           AV  L     +++     VELS+ F    +++ LN E RGID+PT+VL+           
Sbjct: 21  AVQRLAEAVLWLEHAPPSVELSIHFIRLSQMQLLNHERRGIDRPTDVLTVSGSGSGSPDA 80

Query: 86  -------FP--------------TAFASSDGCSSLM-LGDIVLAYEIIEIEANVLGK--- 120
                  FP              + +A+      L+ LG+I ++ E + +          
Sbjct: 81  SWVNGVLFPDKSHIVCVSDGLRASEWAAPSRRDLLLDLGEIYVSVEEMWMRCLRYPHKNL 140

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            F ++L   + H  LH LGYDH   +    M   E+ +L  L
Sbjct: 141 PFHDYLQVALTHALLHALGYDHDTPERWKKMSRREKFMLHQL 182


>gi|221483947|gb|EEE22251.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 776

 Score = 85.1 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 68/217 (31%), Gaps = 75/217 (34%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E  +  DE     L E + A+  S ++     +      +S+ F D+ ++  LN   R  
Sbjct: 233 EVTVDRDEELPSPLDEGLLARQASAVLE---LLGLRAFSVSVHFLDAEKMTQLNRAKRNT 289

Query: 78  DKPTNVLSFPTAFA---------------------------------------------S 92
           + PT+VL+FP+                                                 
Sbjct: 290 NAPTDVLAFPSRSPTVYRRLRSFLTQLSLPRQSETGESGDAATPAKETSEDWEASSTLVP 349

Query: 93  SDGCSSLMLGDIVLA-------YEIIEIEANVLGKEFE--------------------NH 125
               + L LG++           +    EA +L +                         
Sbjct: 350 LRSPADLSLGEVFFCSSAIQDAIDADRREAEILAESGRPCVHLGSGIKDLLKPRLSVPER 409

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  L IH  LHLLG+DH ++ DA  ME +E ++    
Sbjct: 410 LPLLFIHAVLHLLGFDHEEEGDAREMEAVEAAVFARF 446


>gi|213027667|ref|ZP_03342114.1| putative metalloprotease [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
 gi|213161077|ref|ZP_03346787.1| putative metalloprotease [Salmonella enterica subsp. enterica
          serovar Typhi str. E00-7866]
 gi|213583243|ref|ZP_03365069.1| putative metalloprotease [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-0664]
          Length = 85

 Score = 85.1 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 13/88 (14%)

Query: 6  VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
          ++   LDLQ+A EN A   DE   +   + V  +             +   E+++   D 
Sbjct: 1  MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDE 48

Query: 65 HRIETLNFEYRGIDKPTNVLSFPTAFAS 92
               LN  YRG DKPTNVLSFP     
Sbjct: 49 AESHDLNLTYRGKDKPTNVLSFPFEAPP 76


>gi|229815232|ref|ZP_04445568.1| hypothetical protein COLINT_02278 [Collinsella intestinalis DSM
           13280]
 gi|229809242|gb|EEP45008.1| hypothetical protein COLINT_02278 [Collinsella intestinalis DSM
           13280]
          Length = 172

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 12/168 (7%)

Query: 10  RLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
            +D+ + + N    D +    L E       +++++      E  VE+SL + D   +  
Sbjct: 1   MMDMSVLISNDANLDTL----LSEDEVCAIAAHVLAAEGV--ERDVEISLSYVDEDEMHD 54

Query: 70  LNFEYRGIDKPTNVLSFPTAFASSDGCSS---LMLGDIVLAYEIIEIEANVLGKEFENHL 126
           LN ++R ID+ T+VLSF    A  +       L LGDI+LA E+I  +A   G +  +  
Sbjct: 55  LNRQWRDIDRTTDVLSFECDSAFDEDIPLDEVLELGDIILAPEVIARQAPGFGNDPTDEC 114

Query: 127 VHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGI---NDPYEVD 171
             +++HG LHLLGYDH++D +A  ME  E ++L +L +   +DP +V+
Sbjct: 115 RLMLVHGLLHLLGYDHIEDDEAEEMEAREDALLRELAVQRGDDPSKVE 162


>gi|300774540|ref|ZP_07084403.1| possible metal dependent hydrolase [Chryseobacterium gleum ATCC
           35910]
 gi|300506355|gb|EFK37490.1| possible metal dependent hydrolase [Chryseobacterium gleum ATCC
           35910]
          Length = 139

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
           +L       + K + +LI       + + E++ +F D   +  +N +Y   D  T++++F
Sbjct: 8   NLPESVSTDYKKWLEDLILSE---GKKLGEINYIFCDDEYLLKINQDYLQHDYYTDIITF 64

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
                 +          I ++ + I   A+ L +++E  L  ++ HG LHL GY    
Sbjct: 65  DYVKGKTISAE------IFVSLQRISDNASTLSRDYEEELRRVLAHGILHLAGYKDKT 116


>gi|297568434|ref|YP_003689778.1| pyridoxal phosphate biosynthetic protein PdxJ [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924349|gb|ADH85159.1| pyridoxal phosphate biosynthetic protein PdxJ [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 398

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS--S 93
            A+         +   +   ELSL+  D  +++  N  +R  ++PTNVL+F    A    
Sbjct: 17  LARLKKQAAILLHLTGQPRSELSLLLVDDRQMQEFNHLFRQRNRPTNVLAFAQREAPEIP 76

Query: 94  DGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
            G    MLGD+V++ +    EA   G    + L  
Sbjct: 77  GGLGDEMLGDVVISLDTARREARAAGVSPGHRLAW 111


>gi|307110839|gb|EFN59074.1| hypothetical protein CHLNCDRAFT_13914 [Chlorella variabilis]
          Length = 109

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 50  VKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLG 102
           +    +ELSLV  D   +  LN E+RG+D PT+VLSF         A   +      +LG
Sbjct: 6   LAAAPLELSLVLCDDAHMRGLNAEWRGVDAPTDVLSFELEDDDDEDAEGGAPELPINVLG 65

Query: 103 DIVLAYEIIEIEANVLGKEFENH 125
           D+V++ +    +A   G+   + 
Sbjct: 66  DVVISLDTAARQAAERGQSLLDE 88


>gi|301633286|gb|ADK86840.1| translation metalloprotein YbeY [Mycoplasma pneumoniae FH]
          Length = 143

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 5/105 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E +L+     +++ LN ++      T+V+S    +  ++   S  +G+I L  + I  +A
Sbjct: 32  EFALMIVSPWKMKRLNRQFLNRKGVTDVIS--ICYNENEAGFSPAIGEIFLCPKHIFKQA 89

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDD--KDACVMEGLERSI 158
              G      L   +IHG LHL  +DH      ++  M   +  I
Sbjct: 90  KQFGCTPWFLLTRNLIHGLLHLFEFDHEQSLAFESVTMF-FQDEI 133


>gi|237836653|ref|XP_002367624.1| phosphopantethiene--protein transferase domain containing protein
           [Toxoplasma gondii ME49]
 gi|211965288|gb|EEB00484.1| phosphopantethiene--protein transferase domain containing protein
           [Toxoplasma gondii ME49]
          Length = 772

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 68/217 (31%), Gaps = 75/217 (34%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E  +  DE     L E + A+  S ++     +      +S+ F D+ ++  LN   R  
Sbjct: 233 EVTVDRDEELPSPLDEGLLARQASAVLE---LLGLRAFSVSVHFLDAEKMTQLNRAKRNT 289

Query: 78  DKPTNVLSFPTAFA---------------------------------------------S 92
           + PT+VL+FP+                                                 
Sbjct: 290 NAPTDVLAFPSRSPTVYRRLRSFLTQLSLPRQSERGESGDVATPAKETSEDWEASSTLIP 349

Query: 93  SDGCSSLMLGDIVLA-------YEIIEIEANVLGKEFE--------------------NH 125
               + L LG++           +    EA +L +                         
Sbjct: 350 LRSPADLSLGEVFFCSSAIQDAIDADRREAEILAESGRPCVHLGSGIKDLLKPRLSVPER 409

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           L  L IH  LHLLG+DH ++ DA  ME +E ++    
Sbjct: 410 LPLLFIHAVLHLLGFDHEEEGDAREMEAVEAALFARF 446


>gi|256370607|ref|YP_003108432.1| hypothetical protein SMDSEM_028 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009399|gb|ACU52759.1| conserved hypothetical protein [Candidatus Sulcia muelleri SMDSEM]
          Length = 134

 Score = 84.3 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
           + +F +   +  +N ++   +  T+VL+F  +       ++++ G+I ++   I+  +  
Sbjct: 37  NYIFCEDKFLIKINKKFLKKNSYTDVLTFKYSE------NNIISGEIFISINRIKFNSLK 90

Query: 118 LGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
               F + L  +IIH  LHL+GY+ +   +  +M   E   L
Sbjct: 91  FKNSFYDELKRVIIHAGLHLIGYNDIKKYEKNLMSKKEDFYL 132


>gi|313837274|gb|EFS74988.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL037PA2]
 gi|314928051|gb|EFS91882.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL044PA1]
 gi|314972045|gb|EFT16143.1| conserved hypothetical protein TIGR00043 [Propionibacterium acnes
           HL037PA3]
 gi|328907175|gb|EGG26941.1| metalloprotein, YbeY family [Propionibacterium sp. P08]
          Length = 155

 Score = 83.6 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + I  E+    DE  L  L                +       ELS++  D   +E  + 
Sbjct: 2   IDITNESGSPADEEGLVGLATFALD----------WLRIHPSSELSIILIDEQTMEAYHE 51

Query: 73  EYRGIDKPTNVLSFPTAFA----SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           ++ G+  PT+VLSFP          +   S +LGDIVL   +   +A   G+  +  
Sbjct: 52  KFMGLPGPTDVLSFPMDEMRAPVDREDPPSGLLGDIVLCPTVTARQAAENGRTPDGE 108


>gi|119629699|gb|EAX09294.1| chromosome 21 open reading frame 57, isoform CRA_f [Homo sapiens]
          Length = 144

 Score = 83.6 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 31/118 (26%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIF 92

Query: 106 LAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
           L  E I  +     +++ + L                        M   E+++L++LG
Sbjct: 93  LGVEYIFHQCKE-NEDYNDVLT-----------------------MFQKEKAVLDELG 126


>gi|308809559|ref|XP_003082089.1| unnamed protein product [Ostreococcus tauri]
 gi|116060556|emb|CAL55892.1| unnamed protein product [Ostreococcus tauri]
          Length = 470

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 9/114 (7%)

Query: 4   KKVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTD 63
            +++L  L +Q+  E+A       L +  +    KA    + +      + +ELS+    
Sbjct: 38  NELDLNELRVQVE-EDARAVMTKLLTSRGDSAGGKAARGALPRSV----SHMELSVALCS 92

Query: 64  SHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
              I +LN  YR  D  T+VLSFP            +LGD+V++ +    +A  
Sbjct: 93  DEYIRSLNAGYRQKDSATDVLSFPAES----FGPMAVLGDVVVSVDTAATQARE 142


>gi|239907522|ref|YP_002954263.1| hypothetical protein DMR_28860 [Desulfovibrio magneticus RS-1]
 gi|239797388|dbj|BAH76377.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 141

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N E+ G+  PTN+LSFP      D      LG++ L+ + +  EA + G+    H+  L+
Sbjct: 52  NGEFLGLPGPTNILSFPAE----DPDRPDYLGELALSLDAVRREAFLYGQPPGLHMARLL 107

Query: 131 IHGFLHLLGYDHVDDKDACVMEGL 154
            HGFLHL G DH       +ME L
Sbjct: 108 AHGFLHLAGLDHGP-----LMESL 126


>gi|298530259|ref|ZP_07017661.1| protein of unknown function UPF0054 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509633|gb|EFI33537.1| protein of unknown function UPF0054 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 143

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 11/119 (9%)

Query: 29  RTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT 88
           R     +  + + NL  +          L+LV TD  R++ LN  +     PTNVL+F  
Sbjct: 19  RREVRDIIRRILENLDCRE-------SSLNLVITDDSRMQHLNSAFLFCPGPTNVLAF-- 69

Query: 89  AFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKD 147
                    S  LG++ ++ + +  E+ +  +    H V L+ HG  HL G++H  + +
Sbjct: 70  --EEESRHESGFLGEVFISAQAVIRESILYSQPIFEHFVRLLAHGIEHLAGFEHGPEME 126


>gi|262341290|ref|YP_003284145.1| hypothetical protein BLBBGE_533 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272627|gb|ACY40535.1| hypothetical protein BLBBGE_533 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 132

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 9/118 (7%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF 86
             +   E  F + +  L+        N   ++ VF + + +  +N +Y   +  T+VLSF
Sbjct: 10  DFQIENESFFIQEICLLLKNEGMYIGN---INYVFCNDNFLLDMNEKYLQKNLYTDVLSF 66

Query: 87  PTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVD 144
             +       +  + GDI ++ + +   + +  + F   L  ++IH  LH LGYD  +
Sbjct: 67  NYS------INQWICGDIFISVDRVLENSKLWNQSFLVELKRVMIHAVLHFLGYDDQN 118


>gi|189219763|ref|YP_001940404.1| metal-dependent hydrolase [Methylacidiphilum infernorum V4]
 gi|189186621|gb|ACD83806.1| Predicted metal-dependent hydrolase [Methylacidiphilum infernorum
           V4]
          Length = 117

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 14/91 (15%)

Query: 71  NFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           N  +R    PT+V+SF               G+I++   + E EA          ++   
Sbjct: 29  NLFFRD-PHPTDVISFDY-------------GEILICPSVAEKEARQRSIAVLKEVLLYG 74

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILED 161
           IHG LHL G D   +++   ME ++ SILE 
Sbjct: 75  IHGMLHLCGMDDDKEEERKRMEQVQESILEK 105


>gi|328955428|ref|YP_004372761.1| protein of unknown function UPF0054 [Coriobacterium glomerans PW2]
 gi|328455752|gb|AEB06946.1| protein of unknown function UPF0054 [Coriobacterium glomerans PW2]
          Length = 187

 Score = 81.3 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 10/113 (8%)

Query: 23  GDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTN 82
            DE     + E    +  + ++ +     E  VELS+ F  +  +  LN  +RGID+PT+
Sbjct: 9   SDEGLEAPIGEDEIMRIAAFVLEREGI--EIPVELSVSFVGASEMRDLNRSWRGIDEPTD 66

Query: 83  VLSFPTAFAS--------SDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLV 127
           VLSF                    L LGD++LA EII  +A        +   
Sbjct: 67  VLSFECDRPDSKDSLAGRPGCEQPLELGDVILAPEIIAAQATGFKNTAADECR 119


>gi|13508308|ref|NP_110258.1| metalloenzyme interacting with hemolysin [Mycoplasma pneumoniae
           M129]
 gi|1673944|gb|AAB95921.1| predicted metalloenzyme interacting with hemolysin [Mycoplasma
           pneumoniae M129]
          Length = 108

 Score = 81.3 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 5/101 (4%)

Query: 60  VFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLG 119
           +     +++ LN ++      T+V+S    +  ++   S  +G+I L  + I  +A   G
Sbjct: 1   MIVSPWKMKRLNRQFLNRKGVTDVIS--ICYNENEAGFSPAIGEIFLCPKHIFKQAKQFG 58

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDD--KDACVMEGLERSI 158
                 L   +IHG LHL  +DH      ++  M   +  I
Sbjct: 59  CTPWFLLTRNLIHGLLHLFEFDHEQSLAFESVTMF-FQDEI 98


>gi|108885108|ref|NP_073061.2| hypothetical protein MG_388 [Mycoplasma genitalium G37]
 gi|255660098|ref|ZP_05405507.1| hypothetical protein MgenG_00575 [Mycoplasma genitalium G37]
 gi|145559543|sp|P47628|RRMF_MYCGE RecName: Full=Probable rRNA maturation factor
 gi|84626130|gb|AAC71615.2| expressed protein of unknown function [Mycoplasma genitalium G37]
 gi|166078687|gb|ABY79305.1| expressed protein of unknown function [synthetic Mycoplasma
           genitalium JCVI-1.0]
          Length = 154

 Score = 80.9 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E +L+     +++ LN ++      T+V+S    +  ++   SL +G+I L  + I  +A
Sbjct: 43  EFALLIVSCSKMKKLNKQFLKRRGCTDVIS--LCYNETETGFSLAIGEIFLCPKYIFKKA 100

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK--DACVME---GLERSIL 159
             +G      L   +IHG LHL  ++H + +  ++  M     +   IL
Sbjct: 101 KEIGCNNWFLLTRCLIHGILHLFEFNHEESEAFESVTMFFQDAIHEEIL 149


>gi|332256683|ref|XP_003277445.1| PREDICTED: LOW QUALITY PROTEIN: rRNA maturation factor homolog
           [Nomascus leucogenys]
          Length = 125

 Score = 80.9 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 36/111 (32%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIE 112
              ++ ++  D+  I+ +N  YR  + PT+VLSFP         +               
Sbjct: 33  QKFDVGIICVDNENIQHINRIYRDRNVPTDVLSFPFHEXKKKKVT--------------- 77

Query: 113 IEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
                              HG  HLLG+ H  + +       E+++L++LG
Sbjct: 78  -----------------ATHGLCHLLGFTHGSEAEWQQ----EKAVLDELG 107


>gi|297626086|ref|YP_003687849.1| hypothetical protein PFREUD_08850 [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296921851|emb|CBL56411.1| Hypothetical protein PFREUD_08850 [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 152

 Score = 80.5 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 14/120 (11%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + ++ E++   D   L  L      K                 +LS++  D   +   + 
Sbjct: 2   IDLSNESSEEVDTQALIRLARFALDK----------LRIHPQADLSILLVDVDTMTAYHK 51

Query: 73  EYRGIDKPTNVLSFPTAF----ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVH 128
           ++  +D PT+V+SFP       A  +     +LGDIV+       +A   G+  +  + +
Sbjct: 52  QFMNLDGPTDVMSFPMDELREPADGEAPPRGLLGDIVICPAFTSAQAPGNGRTNQEEIEY 111


>gi|269215613|ref|ZP_06159467.1| cupin domain protein [Slackia exigua ATCC 700122]
 gi|269131100|gb|EEZ62175.1| cupin domain protein [Slackia exigua ATCC 700122]
          Length = 185

 Score = 80.5 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 13/108 (12%)

Query: 52  ENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS-------------DGCSS 98
               E S+ F     I  LN E+RGID+PT+VLSF                        +
Sbjct: 55  PERTEASIAFVSDDEIRRLNAEFRGIDRPTDVLSFECDGMDDAFDEGDVFEGSGMPDEET 114

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDK 146
            +LGD+++A ++   +    G   +  L  L++HG LHL G+DHV   
Sbjct: 115 FLLGDVIIATDVARAQTERFGTTPQEELCVLLVHGLLHLCGWDHVHSD 162


>gi|302342384|ref|YP_003806913.1| hypothetical protein Deba_0949 [Desulfarculus baarsii DSM 2075]
 gi|301638997|gb|ADK84319.1| protein of unknown function UPF0054 [Desulfarculus baarsii DSM
           2075]
          Length = 140

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 35/71 (49%)

Query: 58  SLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV 117
           SL+  D   I  +N +Y     PTNVL+F        G +  +LGD+V++ +  + EA  
Sbjct: 21  SLLICDDVEIAQINGQYLDRRGPTNVLAFAMQEGDGAGVNPQILGDVVVSIDTAQREAAE 80

Query: 118 LGKEFENHLVH 128
            G + + H V 
Sbjct: 81  NGLDPDEHFVR 91


>gi|325971266|ref|YP_004247457.1| metalloprotease ybeY [Spirochaeta sp. Buddy]
 gi|324026504|gb|ADY13263.1| metalloprotease ybeY [Spirochaeta sp. Buddy]
          Length = 182

 Score = 79.7 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 22/163 (13%)

Query: 13  LQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNF 72
           + ++ E   +  E+  + +        +  L      + +   E S+ F     ++ LN 
Sbjct: 22  IDVSYEIESYVQEVDQQRV--------IDRLEEVLVLLGQGSCEFSVSFVSDAAMQELNK 73

Query: 73  EYRGIDKPTNVLSFPTAFASSD--------------GCSSLMLGDIVLAYEIIEIEANVL 118
            YR  D+PT++LSF       D                   +LGD+V++ + ++  A   
Sbjct: 74  TYRDKDEPTDILSFVQEDDVEDFSWPEVVFEETESLPQEIRVLGDMVISLDTLKRNALSF 133

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
             E +  L  L+IHG LHLLG DH  +     M   +  +L+ 
Sbjct: 134 SVEPDEELHRLLIHGLLHLLGEDHHTNDADEPMLVKQEQLLQQ 176


>gi|284931430|gb|ADC31368.1| putative metalloprotease ybeY [Mycoplasma gallisepticum str. F]
          Length = 164

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 36  FAKAVSNLISKGYFVKENI-VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
             K ++   S  + VK ++  ELS  F    +   LN   R  +   +V+S       + 
Sbjct: 21  ILKIINQCFSSHFKVKNDLLYELS--FVSEKQSLQLNSSLRNKEYVADVIS--VCLWENA 76

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
              + +LG+I +  + I  +A      F   L+ +IIHG LHLL +DH       
Sbjct: 77  EIITPLLGEIFICSKKIAKDAIKYDVNFWYLLIRMIIHGLLHLLEFDHEQSDAYE 131


>gi|94987342|ref|YP_595275.1| metal-dependent hydrolase [Lawsonia intracellularis PHE/MN1-00]
 gi|145558844|sp|Q1MPX3|RRMF_LAWIP RecName: Full=Probable rRNA maturation factor
 gi|94731591|emb|CAJ54954.1| predicted metal-dependent hydrolase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 133

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
            C + F   +  ++S   F K   +E  +       I   N  Y      TNVLSFP   
Sbjct: 16  FCRLEFVAILEKMLS---FAKLQTIE--VYLVSDTTIAFFNLHYMNCLGITNVLSFPMDD 70

Query: 91  ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDA 148
                    + G I+L+ + +  E+ +  +   ++ + L+ HG  H+ GY H  + D 
Sbjct: 71  ED-------LAGSIILSVDAVCRESLLYRQPILDYCLSLLSHGIAHIAGYTHGVEMDK 121


>gi|281357772|ref|ZP_06244258.1| protein of unknown function UPF0054 [Victivallis vadensis ATCC
           BAA-548]
 gi|281315719|gb|EFA99746.1| protein of unknown function UPF0054 [Victivallis vadensis ATCC
           BAA-548]
          Length = 165

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 2/129 (1%)

Query: 19  NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID 78
           N+ W    + R       A+             +   +L + F     +   N E+ G +
Sbjct: 5   NSSWETRRYPRP-KRSELARLARRAAELAGLPADFDWDLDIRFVGDRTMAQANAEFVGHE 63

Query: 79  KPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANV-LGKEFENHLVHLIIHGFLHL 137
             T+V++F                ++++  +    E        +   +V  I+HG LH 
Sbjct: 64  GTTDVITFSYFDDPGSLFPGEAAVELLICLDAARREGEKRADSSYSREVVLYIVHGLLHS 123

Query: 138 LGYDHVDDK 146
            G D +   
Sbjct: 124 AGEDDLSPA 132


>gi|54607074|ref|NP_001006114.1| rRNA maturation factor homolog isoform 2 [Homo sapiens]
 gi|55824657|gb|AAH22828.2| Chromosome 21 open reading frame 57 [Homo sapiens]
 gi|110645888|gb|AAI19771.1| Chromosome 21 open reading frame 57 [Homo sapiens]
 gi|114108258|gb|AAI22866.1| Chromosome 21 open reading frame 57 [Homo sapiens]
 gi|119629694|gb|EAX09289.1| chromosome 21 open reading frame 57, isoform CRA_b [Homo sapiens]
 gi|124297721|gb|AAI31554.1| Chromosome 21 open reading frame 57 [Homo sapiens]
 gi|221040460|dbj|BAH11937.1| unnamed protein product [Homo sapiens]
          Length = 121

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRIYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIF 92

Query: 106 LAYEIIEIEANV 117
           L  E I  +   
Sbjct: 93  LGVEYIFHQCKE 104


>gi|332872342|ref|XP_003319178.1| PREDICTED: rRNA maturation factor homolog isoform 3 [Pan
           troglodytes]
 gi|332872344|ref|XP_003319179.1| PREDICTED: rRNA maturation factor homolog isoform 4 [Pan
           troglodytes]
          Length = 121

 Score = 76.2 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPT-------AFASSDGCSSLMLGDIV 105
              +L ++  D+  I+ +N  YR  + PT+VLSFP         F   D      LGDI 
Sbjct: 33  QKFDLGIICVDNKNIQHINRVYRDRNVPTDVLSFPFHEHLKAGEFPQPDFPDDYNLGDIF 92

Query: 106 LAYEIIEIEANV 117
           L  E I  +   
Sbjct: 93  LGVEYIFHQCKE 104


>gi|406937|gb|AAD12531.1| unknown [Mycoplasma genitalium]
          Length = 113

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           E +L+     +++ LN ++      T+V+S    +  ++   SL +G+I L  + I  +A
Sbjct: 8   EFALLIVSCSKMKKLNKQFLKRRGCTDVIS--LCYNETETGFSLAIGEIFLCPKYIFKKA 65

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGYDHVDDK--DACVMEGLERSILEDL 162
             +G      L   +IHG LHL  ++H + +  ++  M   + +I E++
Sbjct: 66  KEIGCNNWFLLTRCLIHGILHLFEFNHEESEAFESVTMF-FQDAIHEEI 113


>gi|294660422|ref|NP_853176.2| putative metalloprotease YbeY [Mycoplasma gallisepticum str.
           R(low)]
 gi|298286889|sp|Q7NB85|RRMF_MYCGA RecName: Full=Probable rRNA maturation factor
 gi|284812081|gb|AAP56744.2| putative metalloprotease ybeY [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930658|gb|ADC30597.1| putative metalloprotease ybeY [Mycoplasma gallisepticum str.
           R(high)]
          Length = 164

 Score = 75.5 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 36  FAKAVSNLISKGYFVKENI-VELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSD 94
             K ++   S  + VK N+  ELS  F    +   LN   R  +   +++S       + 
Sbjct: 21  ILKIINQCFSSHFKVKNNLFYELS--FVSEKQSLQLNSSLRNKEYVADIIS--VCLWENA 76

Query: 95  GCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDAC 149
              + +LG+I +  + I  +A      F   L+ +IIHG LHLL +DH       
Sbjct: 77  EIITPLLGEIFICSKKIAKDAIKYDVNFWYLLIRMIIHGLLHLLEFDHEQSDAYE 131


>gi|257460682|ref|ZP_05625783.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
 gi|257442013|gb|EEV17155.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
          Length = 209

 Score = 75.5 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 92  SSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVM 151
                +  +LG +V+  +++E++A  LG   ++    L  HG LH+LGYDH  D     M
Sbjct: 126 DGGNFAPALLGSVVINLDLVELKAAQLGHGRDDETALLFTHGLLHVLGYDHESDD--GQM 183

Query: 152 EGLERSILEDLGIN 165
              E  I+E   + 
Sbjct: 184 RAKECEIIEKFRLP 197



 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 31  LCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90
           LCE  + + +  + ++   +    VEL  +F     +  LN + RGIDK T+VLSFP   
Sbjct: 3   LCEQPYPEILDAIAAE---LGGESVEL--IFVRGEEMRQLNAQTRGIDKATDVLSFPLDP 57

Query: 91  ASSDGCSSLM 100
           A+  G    +
Sbjct: 58  AAFAGFGEDL 67


>gi|207109371|ref|ZP_03243533.1| putative metalloprotease [Helicobacter pylori HPKX_438_CA4C1]
          Length = 99

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEAN 116
           + LV      I  +N + RG D  T+VLSFP      +      LG +V+   + +  A 
Sbjct: 30  IELVLVSGETIREINRDLRGCDYATDVLSFPL-----EAIPHTPLGSVVINAPLAQTNAL 84

Query: 117 VLGKEFENHLVHLIIH 132
            LG   E  +  L IH
Sbjct: 85  KLGHRLEEEIA-LFIH 99


>gi|320170652|gb|EFW47551.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 204

 Score = 73.5 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 36/163 (22%)

Query: 35  VFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGID-----------KPTNV 83
              + +   +     ++   V L + F    R++ L  + +  +           +PT++
Sbjct: 17  AMVRQLCGELQAALGLQPRRVALGVHFVGETRMKALVAQAQSHELASAQPPPRSARPTDI 76

Query: 84  LSF--PTAFASSD-----------------------GCSSLMLGDIVLAYEIIEIEANVL 118
           L+F  P   A+                         G     +G++ L   +IE +    
Sbjct: 77  LAFGNPMDVAADGLHKHPASSLEEMKKCNLAWKSAYGDPVRDIGELFLCPAVIERDCLKD 136

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILED 161
              FE  L  L+ HG  HLLG+DH   + +  M  LE+ +L+ 
Sbjct: 137 QVTFEGRLPVLLAHGLCHLLGHDHDTMRTSAQMFQLEQQLLQA 179


>gi|154336667|ref|XP_001564569.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061604|emb|CAM38635.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 212

 Score = 73.5 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 51/178 (28%)

Query: 36  FAKAVSNLISKGYFVKENIVE--LSLVFTDSHRIETLNFEYRGIDKPTNVLSF------- 86
             + V +LI+    ++    +  L+L F     +  +N +Y+  D+PT+VL+F       
Sbjct: 15  LRREVRHLINLLLTLEHAPYDTRLNLEFVSLAYMRQINCKYKESDRPTDVLTFTSVGKAD 74

Query: 87  ----------PTAFASSDG-----------------------------CSSLMLGDIVLA 107
                     P      D                                 + LGDI ++
Sbjct: 75  RFVNHLLFSDPLEGGDDDEGTHAALATSRECGVAVAAGPTVLKKSAIRAELVDLGDIFVS 134

Query: 108 YEIIEIEANVLG---KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            + + +              +L   ++H  LH LGYDH + +    M   E+ +   L
Sbjct: 135 LDYMRLRCRRYPSTTLPLAPYLHAALVHATLHALGYDHKNPELLQHMARREQQLGRQL 192


>gi|157876147|ref|XP_001686434.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68129508|emb|CAJ08051.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 213

 Score = 73.5 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 49/155 (31%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD------------- 103
           L+L F     +  LN++Y+G+D+PT+VL+F  A  +    + L+ GD             
Sbjct: 39  LNLEFVSLAHMRQLNYKYKGLDRPTDVLTFAPAGEADSFVNDLLFGDFLERGDGDKGTGA 98

Query: 104 ---------------------------------IVLAYEIIEIEANVLG---KEFENHLV 127
                                            I ++ + + +              +L 
Sbjct: 99  TLTASPTCAAAVGAGPNALTQSIIRGELVDLGNIFVSLDYMRLRCRRYPSTTLPLAPYLH 158

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             ++H  LH LGYDH        M   E+ +   L
Sbjct: 159 AALVHATLHALGYDHTSRALLQQMARREQQLGRQL 193


>gi|303326746|ref|ZP_07357188.1| cupin domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862734|gb|EFL85666.1| cupin domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 141

 Score = 73.2 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 10/117 (8%)

Query: 26  IHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS 85
           + L      +  + +   ++       + VEL L+  D   +   N  +     PTNVLS
Sbjct: 14  LPLNRRELALALRIMLRALADAERGAPDSVELHLL--DDAAVSAANRRFMNCIGPTNVLS 71

Query: 86  FPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDH 142
           FP              G ++L+ + +  E  + G+E   H + L+ HG  HL G DH
Sbjct: 72  FPGGEDLP--------GILLLSLDTLARECLLYGQEPAEHALRLLAHGMGHLAGLDH 120


>gi|220904823|ref|YP_002480135.1| hypothetical protein Ddes_1556 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869122|gb|ACL49457.1| protein of unknown function UPF0054 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 156

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 17/140 (12%)

Query: 21  LWGDEIHLRTLCEVVFAKAVSNLI----SKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
            +     L  L       A+  ++    + G       VEL L+  D   +   N  + G
Sbjct: 13  RYPSGCALAPLHWRQMRTALHAMLTVPSAPGEAQAPEGVELYLL--DDASVARANAGHLG 70

Query: 77  IDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLH 136
              PTN+LSFP    S         G ++L+ + +  E  + G++   H V L+ HG  H
Sbjct: 71  CTGPTNILSFPGGSGSP--------GALLLSLDTLRRECLLYGQDPAEHAVRLLAHGMGH 122

Query: 137 LLGYDHVDDKDA---CVMEG 153
           L G DH    DA     ME 
Sbjct: 123 LRGLDHGPVMDALCERHMEA 142


>gi|322502702|emb|CBZ37785.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 213

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 51/155 (32%), Gaps = 49/155 (31%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD------------- 103
           LSL F     +  LN +Y+G D+PT+VL+F  A  +    + L+ GD             
Sbjct: 39  LSLEFVSLAHMRQLNCKYKGSDRPTDVLTFTPAGEADSFVNDLLFGDFLERGDGDTGTGA 98

Query: 104 ---------------------------------IVLAYEIIEIEANVLG---KEFENHLV 127
                                            I ++ + + +              +L 
Sbjct: 99  TLTTSPTCAGAVGAEPNALTQSIIRAELIDLGSIFVSLDYMRLRCRRFPSTTLPLAPYLH 158

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             ++H  LH LGYDH +      M   E+ +   L
Sbjct: 159 AALVHATLHALGYDHKNPALLQQMVRREQQLGRQL 193


>gi|225012536|ref|ZP_03702972.1| protein of unknown function UPF0054 [Flavobacteria bacterium
           MS024-2A]
 gi|225003513|gb|EEG41487.1| protein of unknown function UPF0054 [Flavobacteria bacterium
           MS024-2A]
          Length = 123

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 61  FTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGK 120
           F     +  +N +Y      T+++SF  +   S      +  +  ++   +E  A    +
Sbjct: 20  FVSQEELLEMNQKYLNHTTHTDIISFNYSSKES------LRAEFFISLWAVERSAEEESQ 73

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLER 156
             EN  + +I+HG LH LG++    ++   M  LE 
Sbjct: 74  SVENECLRVIVHGILHCLGFNDASLQEKAKMRTLEN 109


>gi|146099524|ref|XP_001468666.1| hypothetical protein [Leishmania infantum]
 gi|134073034|emb|CAM71753.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 213

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 49/155 (31%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGD------------- 103
           L+L F     +  LN +Y+G D+PT+VL+F  A  +    + L+ GD             
Sbjct: 39  LNLEFVSLAHMRQLNCKYKGSDRPTDVLTFTPAGEADSFVNDLLFGDFLERGDGDTGTGA 98

Query: 104 ---------------------------------IVLAYEIIEIEANVLG---KEFENHLV 127
                                            I ++ + + +              +L 
Sbjct: 99  TLTTSPTCAGAVGAEPNALTQSIIRAELIDLGSIFVSLDYMRLRCRRFPSTTLPLAPYLH 158

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             ++H  LH LGYDH +      M   E+ +   L
Sbjct: 159 AALVHATLHALGYDHKNPALLQQMVRREQQLGRQL 193


>gi|320102827|ref|YP_004178418.1| hypothetical protein Isop_1283 [Isosphaera pallida ATCC 43644]
 gi|319750109|gb|ADV61869.1| protein of unknown function UPF0054 [Isosphaera pallida ATCC 43644]
          Length = 191

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 23/119 (19%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML-GDIVLAYEIIEIEA 115
           +++   D  + + LN      D PT+V++   A A  D   S  +  ++ ++ E    +A
Sbjct: 67  VTIYLVDDRQSQALNRRLLQHDWPTDVITSVIAQAEPDAPRSQPIEAELFISTETAARQA 126

Query: 116 NVLGKEFENHLVHLIIHGFLHLLGY-----------DHVDDKDACVMEGLERSILEDLG 163
                   + +             Y           D  ++ DA  M   E  +L   G
Sbjct: 127 AEHHATAWDEVGR-----------YLVHGLLHLLGHDDANEFDAQRMRQEETRMLRAAG 174


>gi|269836920|ref|YP_003319148.1| hypothetical protein Sthe_0889 [Sphaerobacter thermophilus DSM
           20745]
 gi|269786183|gb|ACZ38326.1| protein of unknown function UPF0054 [Sphaerobacter thermophilus DSM
           20745]
          Length = 153

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 3/150 (2%)

Query: 18  ENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
           E+     E+ +      +    +  +++     +     + +       I  L+  +  I
Sbjct: 3   EHGGLSVELTISPGAPSLDQGRLRAVLAFAARHEGLSGTVGVWICTDAEIADLHLRFMNI 62

Query: 78  DKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHL 137
             PT+VL+FP    ++DG     LGDI ++++    +A   G   +  + +L +HG LHL
Sbjct: 63  PDPTDVLTFPADITNTDG---PYLGDIAVSFDTAADQAADAGHSPQREIAYLALHGLLHL 119

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGINDP 167
            GYD +   +   M   +  ++      +P
Sbjct: 120 AGYDDLTPDERDTMLRRQDELIAAFEREEP 149


>gi|329942556|ref|ZP_08291366.1| hypothetical protein G5Q_0253 [Chlamydophila psittaci Cal10]
 gi|332287187|ref|YP_004422088.1| hypothetical metal-binding protein [Chlamydophila psittaci 6BC]
 gi|313847783|emb|CBY16773.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|325506554|gb|ADZ18192.1| hypothetical metal-binding protein [Chlamydophila psittaci 6BC]
 gi|328815466|gb|EGF85454.1| hypothetical protein G5Q_0253 [Chlamydophila psittaci Cal10]
 gi|328914434|gb|AEB55267.1| possible metalloenzyme [Chlamydophila psittaci 6BC]
          Length = 158

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 4/107 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI-- 113
           ++ + F D   +  L+ E       T+ ++ P            +LG+  ++ +      
Sbjct: 41  QVYVYFLDDEALAKLHDEVFSDPSLTDTITLPID-PPGSTSRPHILGEAFISPKAAIRFL 99

Query: 114 -EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +           +   ++H  LH+LGYD    ++   M G E   L
Sbjct: 100 QDRAEDSDLLYEEISRYVVHSLLHMLGYDDQTPEERKKMRGKENQAL 146


>gi|62184873|ref|YP_219658.1| hypothetical protein CAB231 [Chlamydophila abortus S26/3]
 gi|81312950|sp|Q5L6N4|RRMF_CHLAB RecName: Full=Probable rRNA maturation factor
 gi|62147940|emb|CAH63687.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 158

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 41/107 (38%), Gaps = 4/107 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI-- 113
           ++ + F D   +  L+ E       T+ ++ P     S      +LG+  ++ +      
Sbjct: 41  QVYVYFLDDEALAQLHDEVFADPSLTDTITLPIDSPES-TAHPHILGEAFISPKAAIRFL 99

Query: 114 EANVLGKEF-ENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
           +      +     +   ++H  LH+LGYD    ++   M G E   L
Sbjct: 100 QDRAEDTDLLYEEISRYVVHSLLHMLGYDDQTPEERKKMRGKENQAL 146


>gi|330893139|gb|EGH25800.1| metal-binding heat shock protein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 69

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/52 (57%), Positives = 40/52 (76%)

Query: 120 KEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           K  ++H  H++IHG LHLLGYDH+DD++A  ME LER++LE+LG  DPY  D
Sbjct: 2   KSVDSHWAHMVIHGCLHLLGYDHIDDEEAEEMEALERTLLEELGYPDPYAED 53


>gi|269303385|gb|ACZ33485.1| conserved hypothetical protein [Chlamydophila pneumoniae LPCoLN]
          Length = 158

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 4/110 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI-- 113
           E+ + F +   +  L+ +       T+ ++ P   A  D     +LG+  ++ +      
Sbjct: 41  EIFIYFLEDKALAELHDKVFADPSLTDTITLPID-APGDPAYPHVLGEAFISPQAALRFL 99

Query: 114 -EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
              +   ++    +   ++H  LH+LGYD    ++   M   E  IL  L
Sbjct: 100 ENTSPNQEDIYEEISRYLVHSILHMLGYDDTSSEEKRKMRVKENQILRML 149


>gi|15605149|ref|NP_219934.1| metalloenzyme [Chlamydia trachomatis D/UW-3/CX]
 gi|76789155|ref|YP_328241.1| metal-binding protein [Chlamydia trachomatis A/HAR-13]
 gi|237802849|ref|YP_002888043.1| hypothetical protein JALI_4231 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804771|ref|YP_002888925.1| hypothetical protein CTB_4231 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311230|ref|ZP_05353800.1| hypothetical protein Ctra62_02190 [Chlamydia trachomatis 6276]
 gi|255317532|ref|ZP_05358778.1| hypothetical protein Ctra6_02185 [Chlamydia trachomatis 6276s]
 gi|62901130|sp|O84429|RRMF_CHLTR RecName: Full=Probable rRNA maturation factor
 gi|123606882|sp|Q3KLS9|RRMF_CHLTA RecName: Full=Probable rRNA maturation factor
 gi|3328852|gb|AAC68019.1| possible metalloenzyme [Chlamydia trachomatis D/UW-3/CX]
 gi|76167685|gb|AAX50693.1| hypothetical metal-binding protein [Chlamydia trachomatis A/HAR-13]
 gi|231273071|emb|CAX09984.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274083|emb|CAX10877.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
 gi|296435945|gb|ADH18119.1| hypothetical protein G9768_02185 [Chlamydia trachomatis G/9768]
 gi|296436872|gb|ADH19042.1| hypothetical protein G11222_02190 [Chlamydia trachomatis G/11222]
 gi|296437806|gb|ADH19967.1| hypothetical protein G11074_02190 [Chlamydia trachomatis G/11074]
 gi|297140306|gb|ADH97064.1| hypothetical protein CTG9301_02195 [Chlamydia trachomatis G/9301]
 gi|297748552|gb|ADI51098.1| Hypothetical metal-binding protein [Chlamydia trachomatis D-EC]
 gi|297749432|gb|ADI52110.1| Hypothetical metal-binding protein [Chlamydia trachomatis D-LC]
          Length = 161

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 10/150 (6%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           QI + N      I L++   +V        +      K +  ++ + F D   +  L+ E
Sbjct: 10  QIFISNEQQDVSIDLQSAQRLV--------VLFLELQKVSTDQVYVYFLDDTALAQLHDE 61

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE-FENHLVHLIIH 132
                 PT+ ++ P            +LG+  ++ +          ++   + +   ++H
Sbjct: 62  QFSDPSPTDTITLPID-KPGIASFPHVLGEAFVSPKAAMRFLEQYTEDQLYHEISRYVVH 120

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             LH+LGYD   D+D  +M+  E   L  L
Sbjct: 121 SLLHMLGYDDQTDEDKRIMQEQEDVSLSFL 150


>gi|322495135|emb|CBZ30439.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 213

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 52/155 (33%), Gaps = 49/155 (31%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSF------------------------------ 86
           L+L F     +  LN++Y+G D+ T+VL+F                              
Sbjct: 39  LNLEFVSLAHMRQLNYKYKGSDRATDVLTFTPVGKAGSFVNDLLFSDFLERGDGNKDTGA 98

Query: 87  ---------------PTAFASSDGCSSLM-LGDIVLAYEIIEIEANVLG---KEFENHLV 127
                          P A   S   + L+ LG+I ++ + + +              +L 
Sbjct: 99  TLTTSPTCAGAVGAEPNALTQSIIRAELLDLGNIFVSLDYMRLRCRRYPSTTLPLAPYLH 158

Query: 128 HLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             ++H  LH LGYDH        M   E+ +   L
Sbjct: 159 AALVHATLHALGYDHTSPALLQQMVRREQQLGRQL 193


>gi|15618420|ref|NP_224705.1| metalloenzyme [Chlamydophila pneumoniae CWL029]
 gi|15836040|ref|NP_300564.1| metalloenzyme [Chlamydophila pneumoniae J138]
 gi|16752534|ref|NP_444796.1| hypothetical protein CP0245 [Chlamydophila pneumoniae AR39]
 gi|33241861|ref|NP_876802.1| hypothetical protein CpB0530 [Chlamydophila pneumoniae TW-183]
 gi|62901395|sp|Q9Z843|RRMF_CHLPN RecName: Full=Probable rRNA maturation factor
 gi|4376797|gb|AAD18649.1| predicted Metalloenzyme [Chlamydophila pneumoniae CWL029]
 gi|7189172|gb|AAF38109.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
 gi|8978879|dbj|BAA98715.1| metalloenzyme [Chlamydophila pneumoniae J138]
 gi|33236370|gb|AAP98459.1| hypothetical protein CpB0530 [Chlamydophila pneumoniae TW-183]
          Length = 158

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 4/107 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI-- 113
           E+ + F +   +  L+ +       T+ ++ P   A  D     +LG+  ++ +      
Sbjct: 41  EIFIYFLEDKALAELHDKVFADPSLTDTITLPID-APGDPAYPHVLGEAFISPQAALRFL 99

Query: 114 -EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
              +   ++    +   ++H  LH+LGYD    ++   M   E  IL
Sbjct: 100 ENTSPNQEDIYEEISRYLVHSILHMLGYDDTSSEEKRKMRVKENQIL 146


>gi|159479148|ref|XP_001697660.1| hypothetical protein CHLREDRAFT_176526 [Chlamydomonas reinhardtii]
 gi|158274270|gb|EDP00054.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 296

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 17  VENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRG 76
           V+      E         V  +      ++G +    +  LSLV  D   I  LN  +RG
Sbjct: 70  VDAVAEALEADTAAALRRVLERKGQQKAAEG-WKMPRVACLSLVLCDDAHIRHLNSLHRG 128

Query: 77  IDKPTNVLSFPTAFASSD--GCSSLMLGDIVLAYEIIEIEA 115
            D  T+VLSF               ++GD+ LA   +   A
Sbjct: 129 KDAATDVLSFELGDELDYRVHLPVKLMGDLPLAARRVPYPA 169


>gi|242279255|ref|YP_002991384.1| hypothetical protein Desal_1783 [Desulfovibrio salexigens DSM 2638]
 gi|242122149|gb|ACS79845.1| protein of unknown function UPF0054 [Desulfovibrio salexigens DSM
           2638]
          Length = 151

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVL 118
           L   +   I  +N E+ G   PTNVLSFP +    D   +  LG+IVL+ + +  E  + 
Sbjct: 42  LKIVNDAAIAEVNEEFLGCVGPTNVLSFPFSET-PDLEKNSFLGEIVLSVDTLARETRLY 100

Query: 119 GKEFENHLVHLIIHGFLHLLGYDHVDD 145
           G++ E H V L+ H  LHL GYDH  +
Sbjct: 101 GQQPEEHTVRLLAHALLHLAGYDHGPE 127


>gi|68061851|ref|XP_672927.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56490394|emb|CAI01931.1| hypothetical protein PB300467.00.0 [Plasmodium berghei]
          Length = 346

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 53/163 (32%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML----------- 101
           N V+L + F D   ++ +N +YR  ++PT+++S      + D  + ++            
Sbjct: 13  NNVQLIIKFVDLKEMKNINKKYRNKNEPTDIISILNVVKNDDTNNEILHSDDFFYINNSK 72

Query: 102 -GDIVLAYEIIEIEANVLGKEFE------------------------------------- 123
            GDI L  E I  E  +   ++E                                     
Sbjct: 73  SGDIFLCPEYINRECVISKMKYEKKILKSNSEEVIDEYISTNSNEEENKRGVNKLFRNIF 132

Query: 124 ---NHLVHLIIHGFLHLLGYDHVDD-KDACVMEGLERSILEDL 162
                L   ++HG +HL+  DHV+  K+      LE   +   
Sbjct: 133 DVNERLPFYVLHGLIHLMHKDHVNSFKEYTEFMDLEEQTIGKY 175


>gi|89898578|ref|YP_515688.1| hypothetical protein CF0771 [Chlamydophila felis Fe/C-56]
 gi|123482931|sp|Q253J5|RRMF_CHLFF RecName: Full=Probable rRNA maturation factor
 gi|89331950|dbj|BAE81543.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 158

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 4/107 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEA 115
           ++ + F D   +  ++ E       T+ ++ P   +        +LG+  ++ +      
Sbjct: 41  QVYIYFLDDKALAQIHDEVFSDPSLTDTITLPID-SPGISSHPHVLGEAFISPKAAIRFL 99

Query: 116 NVLGKE---FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
               ++       +   ++H  LH+LGYD    ++   M   E   L
Sbjct: 100 KDRSQDSDLLYEEISRYVVHSLLHMLGYDDQTPEERKKMRVKENQAL 146


>gi|29840002|ref|NP_829108.1| hypothetical protein CCA00235 [Chlamydophila caviae GPIC]
 gi|62901358|sp|Q824B8|RRMF_CHLCV RecName: Full=Probable rRNA maturation factor
 gi|29834349|gb|AAP04986.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
          Length = 158

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 4/107 (3%)

Query: 56  ELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI-- 113
           ++ + F D   +  L+ E       T+ ++ P   +        +LG+  ++ +      
Sbjct: 41  QVYIYFLDDESLAQLHDEVFSDPSLTDTITLPID-SPGTSSQPHILGEAFISPKAAIRFL 99

Query: 114 -EANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            +           +   +IH  LH+LGYD    ++   M   E   L
Sbjct: 100 KDRAEDSDLLYEEISRYVIHSLLHMLGYDDQTPEERKKMRVKENQAL 146


>gi|82705294|ref|XP_726911.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482512|gb|EAA18476.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 521

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 55/164 (33%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLML----------- 101
           N V+L + F +   ++ +N +YR  ++PT+V+S       +D  ++ +L           
Sbjct: 186 NNVQLIIKFVNLKEMKNINKKYRNKNEPTDVISI-LNVVKNDNTNNEILDNSDFFYINNS 244

Query: 102 --GDIVLAYEIIEIEANVLGKEFE------------------------------------ 123
             GDI L  E I  E  +   ++E                                    
Sbjct: 245 KSGDIFLCPEYINKECVISKMKYEQKILKTNNEQLIDEYINTNSNEEENKRGVNKLFQNI 304

Query: 124 ----NHLVHLIIHGFLHLLGYDHVDD-KDACVMEGLERSILEDL 162
                 L   ++H  +HL+  DHV+   +      LE   +E  
Sbjct: 305 FDVNERLPFYVLHALIHLMHKDHVNSFNEYTEFMNLEEQAIEKY 348


>gi|68071683|ref|XP_677755.1| holo-(acyl-carrier protein) synthase [Plasmodium berghei strain
           ANKA]
 gi|56497992|emb|CAI05672.1| holo-(acyl-carrier protein) synthase, putative [Plasmodium berghei]
          Length = 396

 Score = 64.7 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 56/180 (31%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K    LI+   F   N V+L + F D   ++ +N +YR  ++PT+++S      + D 
Sbjct: 49  FEKETKKLINILNF---NNVQLIIKFVDLKEMKNINKKYRNKNEPTDIISILNVVKNDDT 105

Query: 96  CSSLML------------GDIVLAYEIIEIEANVLGKEFE-------------------- 123
            + ++             GDI L  E I  E  +   ++E                    
Sbjct: 106 NNEILHSDDFFYINNSKSGDIFLCPEYINRECVISKMKYEKKILKSNSEEVIDEYISTNS 165

Query: 124 --------------------NHLVHLIIHGFLHLLGYDHVDD-KDACVMEGLERSILEDL 162
                                 L   ++HG +HL+  DHV+  K+      LE   +   
Sbjct: 166 NEEENKRGVNKLFRNIFDVNERLPFYVLHGLIHLMHKDHVNSFKEYTEFMDLEEQTIGKY 225


>gi|213416841|ref|ZP_03349985.1| putative metalloprotease [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
          Length = 65

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 13/77 (16%)

Query: 6  VNLPRLDLQIAVEN-ALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
          ++   LDLQ+A EN A   DE   +   + V  +             +   E+++   D 
Sbjct: 1  MSQVILDLQLACENHAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDE 48

Query: 65 HRIETLNFEYRGIDKPT 81
               LN  YRG DKPT
Sbjct: 49 AESHDLNLTYRGKDKPT 65


>gi|76799813|ref|ZP_00781874.1| Hypothetical UPF0054 protein gbs1562/SAG1501 [Streptococcus
           agalactiae 18RS21]
 gi|76584831|gb|EAO61528.1| Hypothetical UPF0054 protein gbs1562/SAG1501 [Streptococcus
           agalactiae 18RS21]
          Length = 42

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           +  L +HGFLH+ GYDH   ++   M  L+  IL   G+ 
Sbjct: 1   MGFLAVHGFLHINGYDHYTPEEEKEMFSLQEEILTAYGLK 40


>gi|15835320|ref|NP_297079.1| hypothetical protein TC0705 [Chlamydia muridarum Nigg]
 gi|270285492|ref|ZP_06194886.1| hypothetical protein CmurN_03563 [Chlamydia muridarum Nigg]
 gi|270289504|ref|ZP_06195806.1| hypothetical protein CmurW_03658 [Chlamydia muridarum Weiss]
 gi|301336889|ref|ZP_07225091.1| hypothetical protein CmurM_03620 [Chlamydia muridarum MopnTet14]
 gi|62901393|sp|Q9PJX1|RRMF_CHLMU RecName: Full=Probable rRNA maturation factor
 gi|7190736|gb|AAF39519.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
          Length = 161

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           QI + N     +I L+++  +V        I      K +  ++ + F     +  L+ E
Sbjct: 10  QIFISNEQQDVDIDLQSVQRLV--------ILFLELQKVSTDQVYIYFLSDAALAQLHDE 61

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI---EANVLGKEFENHLVHLI 130
                  T+ ++ P            +LG+  ++         +         + +   +
Sbjct: 62  QFSDPSLTDTITLPIDRP-GIQSFPHVLGEAFVSPRAAMRFLGQYTEAQ--LYHEISRYV 118

Query: 131 IHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
           +H  LH+LGYD   D+D  +M   E S L  L
Sbjct: 119 VHSLLHMLGYDDQTDEDKRIMREQEDSSLTFL 150


>gi|221053774|ref|XP_002258261.1| holo-(acyl-carrier protein) synthase [Plasmodium knowlesi strain H]
 gi|193808094|emb|CAQ38798.1| holo-(acyl-carrier protein) synthase, putative [Plasmodium knowlesi
           strain H]
          Length = 628

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 70/226 (30%), Gaps = 83/226 (36%)

Query: 19  NALWGDEIHLRTLCEVV------------FAKAVSNLISKGYFVKENIVELSLVFTDSHR 66
           + +WG+   + +  E+V            F K +  LI    F      +L++ F   ++
Sbjct: 194 DTVWGENYEINSFLEIVNNQTEVPIDLANFEKEIRKLIRLMRF---EDFQLNITFVSLNQ 250

Query: 67  IETLNFEYRGIDKPTNVLSF------------PTAFASSDGCSSLML--GDIVLAYEIIE 112
           ++ LN  +R  ++PT+++S              +    SD      L  GDI L    I 
Sbjct: 251 MKELNKTHRRKNEPTDIISLLHYVDNGQGVSGNSELQGSDIPGGRCLRSGDIYLCPAYIS 310

Query: 113 IEANVLGKEFE------------------------------------------------- 123
            E  +    +E                                                 
Sbjct: 311 RECVLARVNYERSLLNDQSSESGKVEKIGGVSTLDNREDEDRNWEQVRPRGVNKLFRTLF 370

Query: 124 ---NHLVHLIIHGFLHLLGYDHVDDKDA--CVMEGLERSILEDLGI 164
                L   ++HG +HL   DHV++ D     M+  E  I + L  
Sbjct: 371 CVQERLALYVLHGLIHLTNKDHVNNADEYNAFMDIEEDMISKYLKF 416


>gi|182414335|ref|YP_001819401.1| hypothetical protein Oter_2519 [Opitutus terrae PB90-1]
 gi|177841549|gb|ACB75801.1| protein of unknown function UPF0054 [Opitutus terrae PB90-1]
          Length = 177

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 15/129 (11%)

Query: 28  LRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSF- 86
           LR L  +    A   +    +       ELSLVF     +  L+  +      T+V++F 
Sbjct: 23  LRALRWLEAHAAEVRVPQPAFL----EGELSLVFLTDVALAQLHASFLDDPTITDVITFE 78

Query: 87  --PTAFASSDGC--SSLMLGDIVLAYEI------IEIEANVLGKEFENHLVHLIIHGFLH 136
             P+   + + C  +   L  I +              +    + F   +   ++HG+LH
Sbjct: 79  GNPSLGTAGEVCVSADAALRQIGIDPARGTKSRAARRLSVAQQRLFSAEVTLYLVHGWLH 138

Query: 137 LLGYDHVDD 145
           L GYD +  
Sbjct: 139 LAGYDDLQP 147


>gi|166154635|ref|YP_001654753.1| hypothetical protein CTL0681 [Chlamydia trachomatis 434/Bu]
 gi|166155510|ref|YP_001653765.1| hypothetical protein CTLon_0677 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|255348789|ref|ZP_05380796.1| hypothetical protein Ctra70_02230 [Chlamydia trachomatis 70]
 gi|255503329|ref|ZP_05381719.1| hypothetical protein Ctra7_02240 [Chlamydia trachomatis 70s]
 gi|255507008|ref|ZP_05382647.1| hypothetical protein CtraD_02220 [Chlamydia trachomatis D(s)2923]
 gi|301335902|ref|ZP_07224146.1| hypothetical protein CtraL_03715 [Chlamydia trachomatis L2tet1]
 gi|226702063|sp|B0B7Z4|RRMF_CHLT2 RecName: Full=Probable rRNA maturation factor
 gi|226702064|sp|B0BC59|RRMF_CHLTB RecName: Full=Probable rRNA maturation factor
 gi|165930623|emb|CAP04120.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
 gi|165931498|emb|CAP07074.1| conserved hypothetical protein [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|289525466|emb|CBJ14943.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
 gi|296435018|gb|ADH17196.1| hypothetical protein E150_02215 [Chlamydia trachomatis E/150]
 gi|296438738|gb|ADH20891.1| hypothetical protein E11023_02200 [Chlamydia trachomatis E/11023]
          Length = 161

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 10/150 (6%)

Query: 14  QIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFE 73
           QI + N      I L++   +V        +      K +  ++ + F D   +  L+ E
Sbjct: 10  QIFISNEQQDVSIDLQSAQRLV--------VLFLELQKVSTDQVYVYFLDDTALAQLHDE 61

Query: 74  YRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKE-FENHLVHLIIH 132
                  T+ ++ P            +LG+  ++ +          ++   + +   ++H
Sbjct: 62  QFSDPSLTDTITLPID-KPGIASFPHVLGEAFVSPKAAMRFLEQYTEDQLYHEISRYVVH 120

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDL 162
             LH+LGYD   D+D  +M+  E   L  L
Sbjct: 121 SLLHMLGYDDQTDEDKRIMQEQEDVSLSFL 150


>gi|74001574|ref|XP_855646.1| PREDICTED: similar to UPF0054 protein C21orf57 isoform 2 [Canis
          familiaris]
          Length = 73

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 53 NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA 91
             +L L+  D+  ++ LN  YRG D+PT+VLSFP    
Sbjct: 33 RDFDLGLLCVDNEGMQRLNRAYRGDDRPTDVLSFPFHEE 71


>gi|323698302|ref|ZP_08110214.1| protein of unknown function UPF0054 [Desulfovibrio sp. ND132]
 gi|323458234|gb|EGB14099.1| protein of unknown function UPF0054 [Desulfovibrio desulfuricans
           ND132]
          Length = 164

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 11/81 (13%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFAS-----------SDGCSSLMLGDIVLA 107
           L   D   I  LN E+ G   PTN+LSFP                        LG++ L+
Sbjct: 46  LKLVDDREIARLNREFLGCTGPTNILSFPARDGDGTDALADGEVGDPEDDGEFLGELALS 105

Query: 108 YEIIEIEANVLGKEFENHLVH 128
            + +  E ++ G+    HL  
Sbjct: 106 VDALARETDLYGQLPLEHLAR 126


>gi|156098161|ref|XP_001615113.1| holo-(acyl-carrier protein) synthase [Plasmodium vivax SaI-1]
 gi|148803987|gb|EDL45386.1| holo-(acyl-carrier protein) synthase, putative [Plasmodium vivax]
          Length = 511

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 12/100 (12%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDG 95
           F K V  LI    F      +L++ F     ++ +N  +RG ++PT+V+S      S +G
Sbjct: 58  FEKEVRKLIHLMRF---EDFQLNITFVSLKEMKEVNRTHRGKNEPTDVISLLHCVHSGEG 114

Query: 96  CSS---------LMLGDIVLAYEIIEIEANVLGKEFENHL 126
            S          L  GDI L    I  E  +    +E  L
Sbjct: 115 VSPGGDFASGGGLRSGDIYLCPAYISRECVLARVRYERGL 154


>gi|224005883|ref|XP_002291902.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972421|gb|EED90753.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 272

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 122 FENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            E  L  LI+HG LHL+GYDH++D D  +M   E  ++ +L
Sbjct: 211 PEIRLHMLIVHGMLHLVGYDHIEDDDYELMVVREDEVMAEL 251



 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 49  FVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS--FPTAFASSDGCSSLM------ 100
            +     ++SL   D   +  +N E RG+D  T+VLS  F   F        +       
Sbjct: 59  ILGYPTYDVSLTLIDDDYMRDVNAETRGVDASTDVLSFCFSDDFVEPGVLGEVPLHGRYI 118

Query: 101 -----LGDIVLAYEIIEIEA 115
                LG+++++ + +    
Sbjct: 119 GDYYCLGEMLISVDYVRRRC 138


>gi|167737212|ref|ZP_02409986.1| hypothetical protein Bpse14_04051 [Burkholderia pseudomallei 14]
          Length = 39

 Score = 60.5 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 132 HGFLHLLGYDHV-DDKDACVMEGLERSILEDLGINDPYE 169
           HG LH  GYDH   ++DA  ME LE  IL  LG  +PY 
Sbjct: 1   HGALHAQGYDHERGEEDAAEMEALEIDILAKLGFPNPYR 39


>gi|124505535|ref|XP_001351509.1| holo-(acyl-carrier protein) synthase, putative [Plasmodium
           falciparum 3D7]
 gi|23498267|emb|CAD49239.1| holo-(acyl-carrier protein) synthase, putative [Plasmodium
           falciparum 3D7]
          Length = 594

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 20/106 (18%)

Query: 36  FAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLS-FPTAFASSD 94
           F K V  LI     +      L++ F     ++ +N ++R  D  T+V+S        + 
Sbjct: 201 FEKEVRKLIE---ILNYKNFHLNITFVSLEEMKRINKKHRNKDMATDVISILHYLDDPNY 257

Query: 95  GCSSLML------------GDIVLAYEIIEIEA----NVLGKEFEN 124
             +   L            GDI L  E I  E         K   +
Sbjct: 258 DYNYDFLKNAIGGKKGFKSGDIYLCPEYINRECFLSRMNYEKSLLD 303



 Score = 35.0 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDD-KDACVMEGLERSILEDL 162
                L   ++HGF+HL+  DH ++ ++      +E +I++  
Sbjct: 381 SVNERLPFYVLHGFVHLMHKDHENNVEEYNEFMDIEENIIKKY 423


>gi|119629698|gb|EAX09293.1| chromosome 21 open reading frame 57, isoform CRA_e [Homo sapiens]
          Length = 79

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 130 IIHGFLHLLGYDHVDDKDACVMEGLERSILEDLG 163
             HG  HLLG+ H  + +   M   E+++L++LG
Sbjct: 28  ATHGLCHLLGFTHGTEAEWQQMFQKEKAVLDELG 61


>gi|311695360|gb|ADP98233.1| predicted metal-dependent hydrolase [marine bacterium HP15]
          Length = 44

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 134 FLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
            LHL G+DH++D+DA VME LE  +L  LG  +PYE +
Sbjct: 1   MLHLQGFDHIEDEDAEVMEALEVRLLAQLGFGNPYEAE 38


>gi|213029864|ref|ZP_03344311.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 43

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           LHLLGYDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 3   LHLLGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 39


>gi|213027668|ref|ZP_03342115.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 36

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 22/35 (62%)

Query: 99  LMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHG 133
            +LGD+++  +++E EA    K  E H  H+++HG
Sbjct: 2   PLLGDLIICRQVVEQEAQEQSKPLEAHWAHMVVHG 36


>gi|330444255|ref|YP_004377241.1| hypothetical protein G5S_0564 [Chlamydophila pecorum E58]
 gi|328807365|gb|AEB41538.1| conserved hypothetical protein [Chlamydophila pecorum E58]
          Length = 157

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 59  LVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEI--EAN 116
           + F +   +  L+ +       T+ ++ P            +LG+  ++ +  +      
Sbjct: 44  VYFLEDKALAQLHDQVFSDPSLTDTITLPID-PPGASSYPHVLGEAFISPKAAQRFLRCE 102

Query: 117 VLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSIL 159
            L ++    +   ++H  LH+L Y+    +    M   E  +L
Sbjct: 103 DLSEQVYEEVSRYLVHSLLHMLNYEDTTPEKKRKMRVKENLLL 145


>gi|307069660|ref|YP_003878137.1| hypothetical protein ZICARI_187 [Candidatus Zinderia insecticola
           CARI]
 gi|306482920|gb|ADM89791.1| hypothetical protein ZICARI_187 [Candidatus Zinderia insecticola
           CARI]
          Length = 139

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 66  RIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENH 125
           +I+ +NF ++     TN+L+F   +      S+     I +  +I++ E      + +N+
Sbjct: 43  KIKKINFTFKKKKNVTNILTFKNIYNKIIIDSN-----IYICLKILKKECKNKNIKLKNY 97

Query: 126 LVHLIIHGFLHLLGYDHVDDKDACVMEGLERS 157
             ++I+HG LH   + H + K+   M+  E  
Sbjct: 98  FFYIIMHGILHSYNFKHNNFKNYKEMKKKEIY 129


>gi|78356694|ref|YP_388143.1| hypothetical protein Dde_1651 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552550|sp|Q311E8|RRMF_DESDG RecName: Full=Probable rRNA maturation factor
 gi|78219099|gb|ABB38448.1| Protein of unknown function UPF0054 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 169

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 17/86 (19%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFA------SSDGCS-----------SL 99
           + ++ TD      LN E+ G   PTN+LSFP A          D                
Sbjct: 39  VEVILTDDGESAQLNREFLGCYGPTNILSFPAAGPVAAPRQEPDSPPACRKDSSHAEDDT 98

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENH 125
            LG + L+   +  E+ + G+    H
Sbjct: 99  DLGVLALSTGAVHRESFLYGQPPHRH 124


>gi|328480085|gb|EGF49072.1| metalloprotease [Lactobacillus rhamnosus MTCC 5462]
          Length = 35

 Score = 55.1 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HGFLHL GYDH+  +D  VM  L++ IL   G+ 
Sbjct: 1   HGFLHLNGYDHIKPEDEAVMIPLQKKILTAYGLT 34


>gi|169840971|ref|ZP_02874084.1| Hypothetical Metal-Binding Protein [candidate division TM7
           single-cell isolate TM7a]
          Length = 34

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 133 GFLHLLGYDHVDDKDACVMEGLERSILEDLGI 164
           G LHLLGYDH++++D  VM   E  IL     
Sbjct: 1   GMLHLLGYDHIEEEDKAVMRRREEEILSKFNY 32


>gi|58700115|ref|ZP_00374639.1| metal-binding protein [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533369|gb|EAL57844.1| metal-binding protein [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 35

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 20/31 (64%)

Query: 135 LHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           LHLLGYDH    +  +M+ LER IL  LG N
Sbjct: 1   LHLLGYDHQKKDEEIIMKNLEREILASLGYN 31


>gi|156085890|ref|XP_001610354.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154797607|gb|EDO06786.1| membrane protein, putative [Babesia bovis]
          Length = 217

 Score = 50.4 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 33/129 (25%)

Query: 54  IVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFP-----------TAFASSDGCSSLMLG 102
             ++ ++F D+  +   N  + G    T+++S                +         LG
Sbjct: 89  DFQVDVIFLDTKEMTECNSNHFGKHHATDIISLAENSLYTKDKYNLNRSPQLVADFRNLG 148

Query: 103 DIVLAYEIIEIE---ANVLGKEFENHLVHLIIHGFL------HL--LGYDHVDDKDACVM 151
           +I +  + I  +         +           G        H     YDHV+D D   M
Sbjct: 149 EINMCPDYIYKQMIGDQEYSNQ-----------GVCQIKADKHCDENAYDHVEDNDFEEM 197

Query: 152 EGLERSILE 160
              E  +L+
Sbjct: 198 LLQEDRLLD 206


>gi|213581737|ref|ZP_03363563.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 39

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           LGYDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 2   LGYDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 35


>gi|71032427|ref|XP_765855.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352812|gb|EAN33572.1| hypothetical protein TP01_0329 [Theileria parva]
          Length = 252

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 42/139 (30%)

Query: 57  LSLVFTDSHRIETLNFEYRGIDKPTNVLS-----------FPTAFASSDGCSSLMLGDIV 105
           L +   D   ++ +NF+  G D PT+++S           F    +         LG+I 
Sbjct: 124 LDIFIEDEKNMKRINFKQLGGDGPTDIISIRDDLLYLRSDFHKNRSPQKPSQHYHLGEIF 183

Query: 106 LAYEIIE-----------IEANVLGKEFENHLVHLIIHGFLHLLG--YDHVDDKDACVME 152
           L    I+                  K                 +G  YDH  ++    M 
Sbjct: 184 LCPGFIKGVIDSENKLGLKTPEKFEKSLN--------------VGKRYDHEKEEWFNKMA 229

Query: 153 GLERSILED----LGINDP 167
           G+E  +L+     L I++P
Sbjct: 230 GMEDVLLDAFIDILPIDNP 248


>gi|167517114|ref|XP_001742898.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779522|gb|EDQ93136.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1216

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 57 LSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASS 93
          + L   D   I   N  YR +D  T+VLSF  A  + 
Sbjct: 2  VGLYVADDATIREHNLRYRRVDAVTDVLSFAAAPKAP 38


>gi|289807196|ref|ZP_06537825.1| putative metalloprotease [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 50

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 12/59 (20%)

Query: 19 NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGI 77
          NA   DE   +   + V  +             +   E+++   D      LN  YRG 
Sbjct: 4  NAGLPDEAQFQRWLDGVIPQ------------FQEEAEVTIRLVDEAESHDLNLTYRGK 50


>gi|213422920|ref|ZP_03355946.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 36

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 140 YDHVDDKDACVMEGLERSILEDLGINDPYEVD 171
           YDH+DD +A  ME LE  I+  +G  DPY  +
Sbjct: 1   YDHIDDDEAEEMESLETEIMLAMGYEDPYIAE 32


>gi|237755517|ref|ZP_04584138.1| putative metalloprotease [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692341|gb|EEP61328.1| putative metalloprotease [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 37

 Score = 44.7 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 134 FLHLLGYDHVD-DKDACVMEGLERSILEDL 162
            LHLLGYDH   ++DA +M  L+  I + L
Sbjct: 1   ILHLLGYDHETNEEDAKIMFELQDKIFDKL 30


>gi|153813757|ref|ZP_01966425.1| hypothetical protein RUMOBE_04191 [Ruminococcus obeum ATCC 29174]
 gi|149830144|gb|EDM85238.1| hypothetical protein RUMOBE_04191 [Ruminococcus obeum ATCC 29174]
          Length = 30

 Score = 44.3 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 138 LGYDHVDDKDACVMEGLERSILEDLGIN 165
           LGYDH++  +A VME  +   LE+LGI 
Sbjct: 2   LGYDHMEPDEAAVMETKQAKALENLGIT 29


>gi|207108397|ref|ZP_03242559.1| putative metalloprotease [Helicobacter pylori HPKX_438_CA4C1]
          Length = 42

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 132 HGFLHLLGYDHVDDKDACVMEGLERSILEDLGIN 165
           HG LHLLGYDH  +KD       E  +++   + 
Sbjct: 2   HGVLHLLGYDH--EKDKGEQRQKESELIKAFNLP 33


>gi|3089170|gb|AAC14874.1| hypothetical protein [Chlorobaculum tepidum]
          Length = 44

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 121 EFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDL 162
            FE+ L+ + IH  LHL+GYD    +    M   E   L  L
Sbjct: 1   SFEDELLRVTIHSALHLMGYDDETSELRAAMSLREDHYLYRL 42


>gi|169841998|ref|ZP_02875103.1| hypothetical protein cdivTM_32847 [candidate division TM7
           single-cell isolate TM7a]
          Length = 42

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 18/31 (58%)

Query: 100 MLGDIVLAYEIIEIEANVLGKEFENHLVHLI 130
           MLGDIV++ + +  +++  G   E    +++
Sbjct: 1   MLGDIVISIDRVREQSSEYGHSDEREFYYVL 31


>gi|325116812|emb|CBZ52365.1| phosphopantethiene--protein transferase domain containing protein
           [Neospora caninum Liverpool]
          Length = 593

 Score = 40.0 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 124 NHLVHLIIHGFLHLLGYDHVDD 145
             L  L +H  LHLLG+DH +D
Sbjct: 228 ERLPLLFMHASLHLLGFDHEED 249


>gi|58699077|ref|ZP_00373913.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534405|gb|EAL58568.1| conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 41

 Score = 38.1 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 140 YDHVDDKDACVMEGLERSILEDLGIN 165
           YDH    +  +M+ LER IL  LG N
Sbjct: 12  YDHQKKDEEIIMKNLEREILASLGYN 37


>gi|302794552|ref|XP_002979040.1| hypothetical protein SELMODRAFT_109756 [Selaginella moellendorffii]
 gi|300153358|gb|EFJ19997.1| hypothetical protein SELMODRAFT_109756 [Selaginella moellendorffii]
          Length = 576

 Score = 37.0 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
            +  L EVV AK V N+ +  +  +    E+S+       I +LN
Sbjct: 498 DIARLQEVVTAKWVKNVFATAFVGQAGEAEVSVYLV--EGIHSLN 540


>gi|297519634|ref|ZP_06938020.1| putative metalloprotease [Escherichia coli OP50]
          Length = 54

 Score = 36.6 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 13/66 (19%)

Query: 6  VNLPRLDLQIAVE-NALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDS 64
          ++   LDLQ+A E N+   +E   +T    V  +             +   E+++   D+
Sbjct: 1  MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQ------------FQKESEVTIRVVDT 48

Query: 65 HRIETL 70
              +L
Sbjct: 49 AESHSL 54


>gi|226314647|ref|YP_002774543.1| hypothetical protein BBR47_50620 [Brevibacillus brevis NBRC 100599]
 gi|226097597|dbj|BAH46039.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 599

 Score = 36.6 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 21/50 (42%), Gaps = 9/50 (18%)

Query: 106 LAYE----IIEIEANVLGKEFEN----HLVHLIIHGFLHLLGYDHVDDKD 147
           +  +    ++  E ++             ++++ H  LHL G+ H  +K+
Sbjct: 43  ICPDNGWVVVTREGSLYAHPKRRGEVGEWIYVLAHALLHL-GFGHFVEKE 91


>gi|302819681|ref|XP_002991510.1| hypothetical protein SELMODRAFT_186105 [Selaginella moellendorffii]
 gi|300140712|gb|EFJ07432.1| hypothetical protein SELMODRAFT_186105 [Selaginella moellendorffii]
          Length = 598

 Score = 36.2 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 27  HLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLN 71
            +  L EVV A+ V N+ +  +  +    E+S+       I +LN
Sbjct: 520 DIARLQEVVTARWVKNVFATAFVGQAGEAEVSVYLV--EGIHSLN 562


>gi|270708967|ref|ZP_06223147.1| YbeY protein [Haemophilus influenzae HK1212]
 gi|270315698|gb|EFA27859.1| YbeY protein [Haemophilus influenzae HK1212]
          Length = 55

 Score = 36.2 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 11/61 (18%)

Query: 11 LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETL 70
          +DLQIA EN           +  +   + +    +     + + VE+++   D      L
Sbjct: 6  VDLQIATEN-----------IEGLPTEEQIVQWATAAVQPEGDEVEMTVRIVDEAESHEL 54

Query: 71 N 71
          N
Sbjct: 55 N 55


>gi|213852454|ref|ZP_03381986.1| putative metalloprotease [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 31

 Score = 35.4 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 145 DKDACVMEGLERSILEDLGINDPYEVD 171
           D +A  ME LE  I+  +G  DPY  +
Sbjct: 1   DDEAEEMESLETEIMLAMGYEDPYIAE 27


>gi|225716858|gb|ACO14275.1| High choriolytic enzyme 1 precursor [Esox lucius]
          Length = 284

 Score = 35.4 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 3/40 (7%)

Query: 107 AYEIIEIEANVLGKEFEN-HLVHLII--HGFLHLLGYDHV 143
               +  +             VHL +  H  LH LG+DH 
Sbjct: 152 CTSYVGRQGKAQQVSLSRNGCVHLSVVQHEMLHALGFDHE 191


>gi|242781867|ref|XP_002479887.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
 gi|218720034|gb|EED19453.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
          Length = 480

 Score = 35.0 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSL---VFTDSHRIETLNFEYRGIDKPTNVLS 85
           V+++ A+  ++   ++  +   E+ +          I  +N EY    +PT  LS
Sbjct: 322 VLWSLALFIVLLALWYCHKRGKEVRVENERLVTEAEIAKMNEEYEQHIRPTETLS 376


>gi|237738952|ref|ZP_04569433.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|229423552|gb|EEO38599.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
          Length = 1508

 Score = 35.0 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 8/48 (16%)

Query: 33  EVVFAKAVSNLISKGYFVKENIVELSLVFTDSHR-----IETLNFEYR 75
           E +F + ++ +I   YF K+   E++    D+       I+ +N EYR
Sbjct: 211 EDIFGQEITQIILTNYFQKQ---EINFRLQDNDERISPRIQEINQEYR 255


>gi|46203302|ref|ZP_00208894.1| hypothetical protein Magn03005964 [Magnetospirillum
          magnetotacticum MS-1]
          Length = 59

 Score = 34.6 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 12 DLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIET 69
          ++ IAVE+  W  E  +  L   V  +AV   +          VE+S++  D   ++T
Sbjct: 5  EIDIAVEDGRW--EAAIPDLEGFVL-RAVEAGLDILPDSAGGPVEVSVLLADDATVQT 59


>gi|228899606|ref|ZP_04063861.1| DNA helicase II [Bacillus thuringiensis IBL 4222]
 gi|228860036|gb|EEN04441.1| DNA helicase II [Bacillus thuringiensis IBL 4222]
          Length = 645

 Score = 34.6 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHL-IIHGFLH 136
           D +L     +  A  L K+F    +H+  IH FLH
Sbjct: 30  DNILCITYTKRAAEELNKDFNEEGIHISTIHSFLH 64


>gi|75762199|ref|ZP_00742094.1| DNA helicase II [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|74490314|gb|EAO53635.1| DNA helicase II [Bacillus thuringiensis serovar israelensis ATCC
           35646]
          Length = 602

 Score = 34.3 bits (78), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHL-IIHGFLH 136
           D +L     +  A  L K+F    +H+  IH FLH
Sbjct: 38  DNILCITYTKRAAEELNKDFNEEGIHISTIHSFLH 72


>gi|212526810|ref|XP_002143562.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210072960|gb|EEA27047.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 474

 Score = 34.3 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 34  VVFAKAVSNLISKGYFVKENIVELSL---VFTDSHRIETLNFEYRGIDKPTNVLS 85
           V+++ A+  ++   ++  +   E+ L          I  +N EY    +PT  LS
Sbjct: 312 VLWSLALFIVLLALWYCHKRGKEVRLENERLVTEAEIAKMNEEYEQHIRPTETLS 366


>gi|167524944|ref|XP_001746807.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774587|gb|EDQ88214.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1183

 Score = 34.3 bits (78), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 5   KVNLPRLDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVE----LSLV 60
            V  PRL+LQ+  E   + +E HL +L      +   +   + +F+ +   +    L+  
Sbjct: 887 PVAEPRLNLQLECE--PYNEERHLPSLVWEAIEQQSQSCTRRCFFLADQRTQRWLLLTAR 944

Query: 61  FTDSHRIET 69
           F D   +  
Sbjct: 945 FVDHEAMTD 953


>gi|119503935|ref|ZP_01626017.1| invasion protein IbeA [marine gamma proteobacterium HTCC2080]
 gi|119460443|gb|EAW41536.1| invasion protein IbeA [marine gamma proteobacterium HTCC2080]
          Length = 452

 Score = 33.9 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 136 HLLGYDHVDDKD--ACVMEGLERSILE 160
           HLLGYD  +  D     MEG E++++ 
Sbjct: 273 HLLGYDGTNPDDLTRGEMEGREQAMMA 299


>gi|256838827|ref|ZP_05544337.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739746|gb|EEU53070.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 1021

 Score = 33.9 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 19/123 (15%)

Query: 2   SVKKVNLPRLDLQIAVENALWGDEIHL---RTLCEVVFAKAV------SNLISKGYFVKE 52
           ++ K  +P +D    + +  W + IH+   R     +F +A       +  I +  F+  
Sbjct: 547 AIPKSRMPEIDQNELIAHVEWNENIHIDENRKRVTELFGEADRLGAQHTAYIGQQQFLLN 606

Query: 53  NIVELSLVFTD-------SHRIETLNFE---YRGIDKPTNVLSFPTAFASSDGCSSLMLG 102
              ELS+   +       +  I  L  E   +   + PT VLSF       +        
Sbjct: 607 RDRELSISEVELYFKTEETDAIAPLQQEISAWVKRNYPTAVLSFSPPETVFEKLFVTGEA 666

Query: 103 DIV 105
           DIV
Sbjct: 667 DIV 669


>gi|170287919|ref|YP_001738157.1| N-acetylglucosamine-6-phosphate deacetylase [Thermotoga sp. RQ2]
 gi|170175422|gb|ACB08474.1| N-acetylglucosamine-6-phosphate deacetylase [Thermotoga sp. RQ2]
          Length = 364

 Score = 33.9 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 72  FEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
            E R ID PT +L+F     SS+    L+  DIVL+            K ++ 
Sbjct: 138 RELREIDFPTKMLTFAPEIESSELLLKLVERDIVLSAGHSIATFEEFMKFYKE 190


>gi|157803508|ref|YP_001492057.1| glutamyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|229470575|sp|A8EY39|SYE1_RICCK RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|157784771|gb|ABV73272.1| glutamyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 463

 Score = 33.9 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 17/108 (15%)

Query: 71  NFEYRGID---KPTN---VLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFEN 124
           N ++R  D    PT+   V+   T    S      + GD+V+    I+    +       
Sbjct: 123 NSDWRDKDPAAYPTDIKPVIRLKTPREGSITIRDTLQGDVVIENSHIDDMVLLRSDGTAT 182

Query: 125 HLVHLII--H--GFLHLL-GYDHVDDKDACVMEGLERSILEDLGINDP 167
           +++ +++  H  G  H++ G DH+ +         + +I +  G   P
Sbjct: 183 YMLAVVVDDHDMGITHIIRGDDHLTNA------ARQIAIYQACGYAVP 224


>gi|170781659|ref|YP_001709991.1| hypothetical protein CMS_1253 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156227|emb|CAQ01369.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 288

 Score = 33.9 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 12/73 (16%)

Query: 53  NIVELSLVFTDSHRIETLNFEYRGIDKPTNVL----SF---PTAFASSDGCSSLMLGDIV 105
           +I E+SL    +  I  +    RG+D P + L    SF               L  G++V
Sbjct: 56  DITEVSLSLVTNEFIAHI----RGLDGPED-LDEASSFLVVAATLLDLKLVGLLPQGELV 110

Query: 106 LAYEIIEIEANVL 118
            A ++  +EA  L
Sbjct: 111 DAEDVALLEARDL 123


>gi|308175724|ref|YP_003922429.1| DNA helicase II [Bacillus amyloliquefaciens DSM 7]
 gi|307608588|emb|CBI44959.1| DNA helicase II [Bacillus amyloliquefaciens DSM 7]
          Length = 517

 Score = 33.5 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 103 DIVLAYEIIEIEANVLGKEFENHLVHL-IIHGFLH 136
           D +L     +  A  L K  +   +H+  IH FLH
Sbjct: 38  DNILCITYTKRAAEELKKGLDEEGIHISTIHSFLH 72


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.314    0.176    0.622 

Lambda     K      H
   0.267   0.0544    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,108,878,541
Number of Sequences: 14124377
Number of extensions: 200537822
Number of successful extensions: 497151
Number of sequences better than 10.0: 2221
Number of HSP's better than 10.0 without gapping: 4230
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 488099
Number of HSP's gapped (non-prelim): 4491
length of query: 171
length of database: 4,842,793,630
effective HSP length: 129
effective length of query: 42
effective length of database: 3,020,748,997
effective search space: 126871457874
effective search space used: 126871457874
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 77 (33.9 bits)