HHsearch alignment of GI: 254780429 and MMDB domain: 1hjr_A_
>1hjr_A (A:) Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli}
Probab=96.24 E-value=0.033 Score=34.17 Aligned_cols=100 Identities=13% Similarity=0.131 Sum_probs=76.6
Q ss_pred CEEEEECCCHHHEEEEEECCCCEE--EEEEE-EECCHH---HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
Q ss_conf 278862168012789997798139--99999-842268---999899999999976099987866543037854320246
Q gi|254780429|r 2 IVLALDTTGADCSVAIYDSHAGRI--LGSYF-KNLGRG---HAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVR 75 (206)
Q Consensus 2 ~iLaIdTs~~~~sval~~~~~~~~--~~~~~-~~~~r~---hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlR 75 (206)
.||+||-|+..+.+|+++.+.++. +..-. ...+.. ....|.-.+.+++++.+.+.--|..+.++..+.+...+-
T Consensus 2 rvLgiDpg~~~tG~av~~~~~~~~~~i~~g~i~~~~~~~~~R~~~i~~~l~~~l~~~~p~~v~iE~~~~~~~~~s~~~l~ 81 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLG 81 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHH
T ss_pred EEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHH
T ss_conf 89998457784689999966997899995348459877799999999999999863598669998412215735788899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 68999999997326871103838999
Q gi|254780429|r 76 VSIAVARGISLVLKQPALGVGNLEVL 101 (206)
Q Consensus 76 igia~akgLa~~~~~pv~gvssle~l 101 (206)
-...++.+.+...++|+.-|+-.+.-
T Consensus 82 ~~~G~i~~~~~~~~ipi~~v~P~~vK 107 (158)
T 1hjr_A 82 QARGVAIVAAVNQELPVFEYAARQVK 107 (158)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECHHHHH
T ss_conf 99999999999759738997689988