Query         gi|254780429|ref|YP_003064842.1| hypothetical protein CLIBASIA_01570 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 206
No_of_seqs    112 out of 2787
Neff          8.5 
Searched_HMMs 33803
Date          Wed Jun  1 12:49:50 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780429.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >2gel_A Putative GRAM negative  99.9 5.1E-27 1.5E-31  195.3   7.2  126    1-129     1-130 (135)
  2 >3en9_A Glycoprotease, O-sialo  99.9 3.7E-26 1.1E-30  189.7  10.0  106    1-109     6-123 (165)
  3 >2ivn_A O-sialoglycoprotein en  99.9   7E-26 2.1E-30  188.0   9.2  105    1-107     1-117 (166)
  4 >3eno_A Putative O-sialoglycop  99.9 1.4E-24 4.2E-29  179.4   9.9  106    1-108     6-123 (173)
  5 >2a6a_A Hypothetical protein T  99.9   1E-24   3E-29  180.4   8.2   98    1-102    13-110 (149)
  6 >2gel_A Putative GRAM negative  98.8 3.2E-08 9.3E-13   73.3   7.6   76   97-172     1-82  (96)
  7 >1saz_A Probable butyrate kina  96.6   0.024   7E-07   35.1   8.9   94    1-96      2-128 (221)
  8 >1hjr_A Holliday junction reso  96.2   0.033 9.9E-07   34.2   8.2  100    2-101     2-107 (158)
  9 >1hux_A Activator of (R)-2-hyd  96.0    0.01   3E-07   37.5   4.6   96    1-98      3-104 (127)
 10 >2h3g_X Biosynthetic protein;   95.5   0.028 8.4E-07   34.6   5.3   87    2-96      1-89  (121)
 11 >2iir_A Acetate kinase; transf  94.7    0.33 9.7E-06   27.7   8.8   98    1-101     1-127 (182)
 12 >1vhx_A Putative holliday junc  94.5   0.087 2.6E-06   31.5   5.4   96    1-101     3-106 (150)
 13 >2ch5_A NAGK protein; transfer  94.0    0.45 1.3E-05   26.8   8.3   99    2-101     7-114 (153)
 14 >3h3n_X Glycerol kinase; ATP-b  94.0    0.12 3.4E-06   30.7   5.2   63    3-66      7-82  (107)
 15 >3jvp_A Ribulokinase; PSI-II,   93.9   0.076 2.2E-06   31.8   4.1   64    3-66      7-94  (224)
 16 >1zc6_A Probable N-acetylgluco  93.6    0.24   7E-06   28.7   6.2   68    3-71     13-87  (147)
 17 >3djc_A Type III pantothenate   93.3    0.22 6.5E-06   28.8   5.7   74    1-76      1-75  (147)
 18 >3g25_A Glycerol kinase; IDP00  93.2    0.29 8.7E-06   28.0   6.2   63    2-65      7-82  (109)
 19 >3i8b_A Xylulose kinase; strai  93.0    0.15 4.3E-06   30.0   4.4   98    3-102     7-131 (163)
 20 >2qm1_A Glucokinase; alpha-bet  92.4    0.62 1.8E-05   25.9   7.0  101    2-103     7-123 (150)
 21 >1g99_A Acetate kinase; alpha/  92.2    0.88 2.6E-05   24.9   9.6   99    1-102     1-129 (189)
 22 >2zf5_O Glycerol kinase; hyper  91.3     0.8 2.4E-05   25.2   6.5  101    1-102     1-139 (238)
 23 >2dpn_A Glycerol kinase; therm  90.5     1.1 3.1E-05   24.4   6.5  101    1-102     1-140 (241)
 24 >3l0q_A Xylulose kinase; xlylu  90.2     1.3 3.8E-05   23.9   6.7   67    3-70      7-87  (297)
 25 >2w40_A Glycerol kinase, putat  89.8    0.63 1.9E-05   25.9   4.9   64    1-65      3-82  (110)
 26 >2ap1_A Putative regulator pro  89.8    0.29 8.6E-06   28.1   3.1   98    2-100    25-132 (143)
 27 >2iik_A 3-ketoacyl-COA thiolas  89.5     1.3 3.9E-05   23.8   6.3   89   35-123    53-149 (418)
 28 >1z05_A Transcriptional regula  89.2       1   3E-05   24.6   5.5   67    3-71      5-75  (111)
 29 >3ifr_A Carbohydrate kinase, F  88.7     1.1 3.2E-05   24.4   5.4   67    2-69      8-88  (242)
 30 >2e1z_A Propionate kinase; TDC  88.6     1.8 5.3E-05   22.9   8.4   96    1-100    18-135 (195)
 31 >3eo3_A Bifunctional UDP-N-ace  88.5     0.6 1.8E-05   26.0   4.0  102    1-103    20-136 (163)
 32 >2a6a_A Hypothetical protein T  87.3       1   3E-05   24.5   4.6   56   97-155     1-58  (69)
 33 >2vu1_A Acetyl-COA acetyltrans  87.3    0.95 2.8E-05   24.7   4.4   83   35-117    25-114 (392)
 34 >1iv0_A Hypothetical protein;   87.2     0.4 1.2E-05   27.2   2.4   85    1-93      1-89  (98)
 35 >2hoe_A N-acetylglucosamine ki  86.6       1   3E-05   24.5   4.2  100    2-103     3-118 (149)
 36 >2e2o_A Hexokinase; acetate an  86.3     1.1 3.4E-05   24.2   4.4   93    1-100     2-98  (130)
 37 >3bzc_A TEX; helix-turn-helix,  86.0     2.5 7.4E-05   22.0   7.6   87    2-96      5-95  (142)
 38 >2d4w_A Glycerol kinase; alpha  85.1     2.8 8.2E-05   21.7   6.3   64    3-67      4-80  (244)
 39 >3il3_A 3-oxoacyl-[acyl-carrie  84.6     2.4   7E-05   22.2   5.3   64   34-98     21-84  (289)
 40 >1z6r_A MLC protein; transcrip  84.2     1.3 3.7E-05   23.9   3.8   91    2-93      4-109 (112)
 41 >1ulq_A Putative acetyl-COA ac  83.0    0.75 2.2E-05   25.4   2.2   83   35-117    24-114 (401)
 42 >3gwa_A 3-oxoacyl-(acyl-carrie  82.7     1.1 3.3E-05   24.3   3.0   92   26-117    33-132 (168)
 43 >3il6_A 3-oxoacyl-[acyl-carrie  82.4     3.6 0.00011   21.0   6.0   86   31-117    12-104 (138)
 44 >3gbt_A Gluconate kinase; LBA0  82.2     1.5 4.5E-05   23.4   3.5   65    1-66      3-78  (237)
 45 >2ib8_A Acetyl-COA acetyltrans  81.9    0.76 2.3E-05   25.3   1.9   83   35-117    30-119 (395)
 46 >2kho_A Heat shock protein 70;  81.6    0.42 1.2E-05   27.0   0.5   75    1-75      6-83  (96)
 47 >1sz2_A Glucokinase, glucose k  81.5     1.5 4.4E-05   23.4   3.3   98    1-104    14-118 (141)
 48 >2aa4_A Mannac kinase, putativ  80.4     2.9 8.5E-05   21.6   4.5   99    1-103     1-111 (134)
 49 >2p3r_A Glycerol kinase; glyce  78.9     4.6 0.00014   20.2   6.3   63    3-66      5-80  (510)
 50 >1dkg_D Molecular chaperone DN  78.9     0.8 2.4E-05   25.2   1.2   75    1-75      6-84  (97)
 51 >1wl4_A Acetyl-coenzyme A acet  77.9     1.6 4.7E-05   23.3   2.5   62   35-96     28-89  (397)
 52 >2v7y_A Chaperone protein DNAK  77.6     2.4 7.2E-05   22.1   3.4   65    2-67      6-70  (73)
 53 >3epq_A Putative fructokinase;  76.2     3.9 0.00011   20.8   4.1   98    2-102     4-111 (147)
 54 >2c7y_A 3-ketoacyl-COA thiolas  76.1     2.6 7.6E-05   21.9   3.1   88   36-123    37-133 (404)
 55 >3lma_A Stage V sporulation pr  73.9     3.6 0.00011   20.9   3.5   56   36-98     41-96  (164)
 56 >2ebd_A 3-oxoacyl-[acyl-carrie  73.6     1.7 5.1E-05   23.0   1.7   53   31-92     32-84  (139)
 57 >3hz6_A Xylulokinase; xylulose  72.9     6.6  0.0002   19.2   6.2  102    1-103     5-142 (241)
 58 >3khy_A Propionate kinase; csg  72.7     6.7  0.0002   19.2   9.9  115    2-120     3-143 (172)
 59 >3goa_A 3-ketoacyl-COA thiolas  70.6     3.4   1E-04   21.2   2.7   61   37-97     27-89  (387)
 60 >2vgn_A DOM34; translation ter  68.7     7.5 0.00022   18.9   4.1   66    3-72      7-83  (141)
 61 >2ebd_A 3-oxoacyl-[acyl-carrie  68.7     7.7 0.00023   18.8   4.2  114    3-117     5-136 (170)
 62 >2itm_A Xylulose kinase, xylul  67.6     8.6 0.00026   18.5   5.6   65    2-67      1-76  (231)
 63 >1zow_A 3-oxoacyl-[acyl-carrie  67.5     8.2 0.00024   18.7   4.1   51   33-92     36-86  (143)
 64 >3fk5_A 3-oxoacyl-synthase III  67.3     5.4 0.00016   19.8   3.1   82   36-117    60-148 (338)
 65 >1nu0_A Hypothetical protein Y  66.8     2.5 7.3E-05   22.0   1.3   86    2-94      4-93  (138)
 66 >3bex_A Type III pantothenate   66.0     8.7 0.00026   18.5   4.0   70    1-74      1-72  (134)
 67 >3cqy_A Anhydro-N-acetylmurami  65.1     9.6 0.00029   18.2   5.5   35    1-35      5-43  (190)
 68 >1wdk_C 3-ketoacyl-COA thiolas  61.3     9.7 0.00029   18.2   3.5   60   37-96     30-91  (390)
 69 >2f82_A HMG-COA synthase; HMGS  59.1      10  0.0003   18.0   3.3   61   36-96     51-113 (414)
 70 >2d0o_A DIOL dehydratase-react  57.0      13 0.00039   17.3   5.6   84    1-92      1-93  (131)
 71 >2gup_A ROK family protein; su  55.6      14 0.00042   17.1   5.8   95    2-103     5-109 (134)
 72 >1u6e_A 3-oxoacyl-[acyl-carrie  55.3     7.7 0.00023   18.8   2.2   47   35-86     48-94  (155)
 73 >1afw_A 3-ketoacetyl-COA thiol  53.2     4.2 0.00013   20.5   0.6   58   39-96     37-98  (393)
 74 >1ub7_A 3-oxoacyl-[acyl-carrie  53.1     8.9 0.00026   18.4   2.2   48   36-92     49-96  (154)
 75 >3i33_A Heat shock-related 70   52.9      15 0.00046   16.8   4.8   62    2-67      7-68  (70)
 76 >1woq_A Inorganic polyphosphat  51.7      16 0.00048   16.7   5.8   96    3-100    14-126 (143)
 77 >3h78_A PQS biosynthetic enzym  49.9      17 0.00051   16.5   9.2   78   35-117    53-139 (162)
 78 >2ywj_A Glutamine amidotransfe  49.0     9.7 0.00029   18.2   1.9   59   45-103    15-83  (186)
 79 >2p8u_A Hydroxymethylglutaryl-  45.1      12 0.00035   17.6   1.8   69   27-95     62-133 (443)
 80 >2a9v_A GMP synthase; NP_39440  44.7      19 0.00056   16.3   2.8   50   56-105    52-102 (212)
 81 >3gwa_A 3-oxoacyl-(acyl-carrie  44.5      14 0.00043   17.0   2.2   50   36-90     60-109 (162)
 82 >1hnj_A Beta-ketoacyl-acyl car  44.1      21 0.00063   16.0   4.8  113    3-117     5-137 (317)
 83 >2nv0_A Glutamine amidotransfe  43.7      13 0.00039   17.3   1.9   60   44-103    15-87  (196)
 84 >1i88_A CHS2, chalcone synthas  43.1      22 0.00065   15.9   3.8   37   38-74     89-126 (375)
 85 >3d2f_A Heat shock protein hom  43.1      22 0.00065   15.9   5.1  113    1-134     1-120 (220)
 86 >2ywd_A Glutamine amidotransfe  43.0      20 0.00059   16.1   2.7   63   42-104    14-90  (191)
 87 >3ihp_A Ubiquitin carboxyl-ter  41.9      15 0.00045   16.9   2.0   36   66-102    14-57  (218)
 88 >3dou_A Ribosomal RNA large su  41.7     6.5 0.00019   19.3   0.0   31   44-74     12-42  (191)
 89 >3a5r_A Benzalacetone synthase  41.5      23 0.00068   15.7   4.1   40   37-76     98-138 (387)
 90 >1u6e_A 3-oxoacyl-[acyl-carrie  40.2      20 0.00059   16.1   2.4   80   36-117    60-147 (180)
 91 >2khz_A C-MYC-responsive prote  40.1      14 0.00043   17.1   1.6   61   37-97     25-111 (165)
 92 >2p0u_A Stilbenecarboxylate sy  38.6      24 0.00071   15.6   2.6   37   38-74     91-128 (383)
 93 >2q2r_A Glucokinase 1, putativ  38.5     7.5 0.00022   18.9  -0.0   63    3-66     31-97  (170)
 94 >2i7x_A Protein CFT2; polyaden  38.0      11 0.00032   17.9   0.7   61    1-68      1-63  (143)
 95 >1hqk_A 6,7-dimethyl-8-ribityl  36.5      28 0.00082   15.2   4.3   58    1-72      1-58  (154)
 96 >1ej0_A FTSJ; methyltransferas  35.7     9.3 0.00028   18.3   0.1   31   44-74      9-39  (180)
 97 >1zow_A 3-oxoacyl-[acyl-carrie  35.5      29 0.00085   15.1   3.5   68   28-96     41-109 (170)
 98 >1ted_A PKS18; thiolase fold,   35.3      29 0.00085   15.1   4.5   36   38-73    114-150 (393)
 99 >1ub7_A 3-oxoacyl-[acyl-carrie  34.8      17 0.00049   16.7   1.2   88   27-117    39-135 (168)
100 >3e1h_A PKSIIINC, putative unc  33.9      24 0.00071   15.6   1.9   29   38-66    111-139 (465)
101 >1ee0_A 2-pyrone synthase; pol  33.2      31 0.00092   14.9   3.8   34   38-71    108-141 (402)
102 >2zo4_A Metallo-beta-lactamase  33.1      31 0.00092   14.9   2.7   55    9-68     18-72  (151)
103 >2v4w_A Hydroxymethylglutaryl-  32.8      24 0.00071   15.6   1.8   45   27-71     43-88  (460)
104 >1o1y_A Conserved hypothetical  32.4      32 0.00095   14.8   3.6   51   55-105    54-110 (239)
105 >3euo_A Type III pentaketide s  32.2      32 0.00096   14.8   2.4   35   38-72     82-116 (379)
106 >1qyr_A KSGA, high level kasug  31.6      19 0.00056   16.3   1.1   55   43-108     8-62  (252)
107 >1xes_A Dihydropinosylvin synt  31.3      30 0.00088   15.0   2.1   40   38-77     90-130 (377)
108 >3h78_A PQS biosynthetic enzym  31.2      34 0.00099   14.7   4.7   80   37-117    74-160 (197)
109 >2ews_A Pantothenate kinase; P  29.6      36  0.0011   14.5   5.9   56    1-71     20-75  (120)
110 >2d3m_A Pentaketide chromone s  29.2      30 0.00089   15.0   1.8   34   38-71     89-123 (379)
111 >1mzj_A Beta-ketoacylsynthase   28.2      38  0.0011   14.3   4.8   40   35-74     58-98  (339)
112 >1yuw_A Heat shock cognate 71   27.3      39  0.0012   14.2   4.0   63    1-67      6-68  (70)
113 >1q7r_A Predicted amidotransfe  24.7      36  0.0011   14.5   1.5   63   42-104    35-110 (219)
114 >1rvv_A Riboflavin synthase; t  24.6      44  0.0013   13.9   4.2   58    1-72      1-58  (154)
115 >2nyu_A Putative ribosomal RNA  23.5      20 0.00061   16.1   0.1   31   44-74      9-39  (196)
116 >3eeq_A Putative cobalamin bio  23.4      46  0.0014   13.8   3.8   55   38-104    13-67  (127)
117 >2p4z_A Metal-dependent hydrol  23.0      47  0.0014   13.7   2.5   58    1-68     13-78  (284)
118 >3l83_A Glutamine amido transf  22.9      41  0.0012   14.1   1.6   50   55-105    45-99  (250)
119 >2plw_A Ribosomal RNA methyltr  22.4      22 0.00064   15.9   0.0   29   45-73     10-38  (201)
120 >1vco_A CTP synthetase; tetram  22.3      48  0.0014   13.6   3.0   47   56-104    73-120 (270)
121 >3i33_A Heat shock-related 70   21.9      49  0.0015   13.6   2.4   22    1-22     23-44  (230)
122 >2w6k_A COBE; biosynthetic pro  21.9      48  0.0014   13.6   1.7   60   37-103    23-82  (145)
123 >1s2d_A Purine trans deoxyribo  21.4      49  0.0015   13.6   1.7   22   76-97     96-117 (167)
124 >2j01_S 50S ribosomal protein   21.2      46  0.0014   13.8   1.5   70    3-73     25-96  (112)
125 >3eld_A Methyltransferase; fla  20.9      26 0.00076   15.4   0.2   15   59-73     31-45  (203)
126 >3htv_A D-allose kinase, allok  20.6      52  0.0016   13.4   5.5   98    2-104     8-123 (156)
127 >2i2c_A Probable inorganic pol  20.5      30 0.00088   15.0   0.4   59   33-97      8-69  (93)
128 >3gcz_A Polyprotein; flaviviru  20.4      23 0.00068   15.7  -0.2   48   44-101     8-56  (174)
129 >3ehd_A Uncharacterized conser  20.3      53  0.0016   13.4   2.1   22   76-97     84-105 (162)
130 >1f8y_A Nucleoside 2-deoxyribo  20.2      49  0.0014   13.6   1.5   23   76-98     93-115 (157)

No 1  
>>2gel_A Putative GRAM negative resuscitation promoting factor; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium LT2} PDB: 2gem_A 1okj_A (A:1-93,A:190-231)
Probab=99.94  E-value=5.1e-27  Score=195.33  Aligned_cols=126  Identities=28%  Similarity=0.494  Sum_probs=101.4

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf             92788621680127899977981399999984226899989999999997609998786654303785432024668999
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAV   80 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~   80 (206)
                      |++|+||||++.+++|+++++  +++.+. +...++|++.|+|+++++|++++++++|||.|+|+.|||||||+|||+++
T Consensus         1 M~iLaIDTS~~~~~vAl~~d~--~il~~~-~~~~~~hse~L~~~I~~lL~~a~i~~~dId~Iavs~GPGSFTGlRVgla~   77 (135)
T 2gel_A            1 MRILAIDTATEACSVALWNNG--TINAHF-ELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGI   77 (135)
T ss_dssp             CEEEEEECSSSEEEEEEEETT--EEEEEE-EECCSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHH
T ss_pred             CCEEEEECCCCCEEEEEEECC--EEEEEE-EECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCHHHHHHHHH
T ss_conf             989999927727199999999--999999-96548999999999999985500221230443000356642337788999


Q ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC----CCCEEEEEE
Q ss_conf             9999973268711038389999875214678659998508----714179999
Q gi|254780429|r   81 ARGISLVLKQPALGVGNLEVLARAHLDSHVGRPIMVLVSL----FHQKVCCQK  129 (206)
Q Consensus        81 akgLa~~~~~pv~gvssle~la~~~~~~~~~~~i~~~idA----rr~~~y~~~  129 (206)
                      ||||++++++|++|||+-+.++--+.+....+....+-++    -|++|-|..
T Consensus        78 AkgLa~~~~iPligvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (135)
T 2gel_A           78 AQGLALGANLPMIGVSAAEDMLPIASQKLAAGETVAVEHAEPVYLRNEVAWKK  130 (135)
T ss_dssp             HHHHHHTTTCCEEEECCHHHHHHHHHHHHHTTCCBCGGGCCCCCC--------
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCC
T ss_conf             99999863898764059999999999999859998814176242585200357


No 2  
>>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* (A:1-125,A:287-326)
Probab=99.93  E-value=3.7e-26  Score=189.74  Aligned_cols=106  Identities=28%  Similarity=0.337  Sum_probs=93.8

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEE------------ECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
Q ss_conf             9278862168012789997798139999998------------4226899989999999997609998786654303785
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFK------------NLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP   68 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~------------~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP   68 (206)
                      |+||+||||++.+++||+++++ +++.+...            ...|.|++.|+|+|+++|++++  ++++|+|+|++||
T Consensus         6 M~iLaIdTS~~~~sval~~~~~-~i~~~~~~~~~~~~~g~~~~~a~~~H~e~L~~~i~~~L~~~~--i~~id~Iavs~GP   82 (165)
T 3en9_A            6 MICLGLEGTAEKTGVGIVTSDG-EVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEVVD--KNEIDLIAFSQGP   82 (165)
T ss_dssp             CEEEEEECSSSEEEEEEEETTS-CEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHSC--GGGCCEEEEEEES
T ss_pred             CEEEEEECCCHHHEEEEEECCC-CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCEEEEECCC
T ss_conf             5699998651313679997999-299886687657989999189999999999999999997589--5358889996798


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             43202466899999999732687110383899998752146
Q gi|254780429|r   69 GSFTGVRVSIAVARGISLVLKQPALGVGNLEVLARAHLDSH  109 (206)
Q Consensus        69 GSFTGlRigia~akgLa~~~~~pv~gvssle~la~~~~~~~  109 (206)
                      |||||||||+++||||++++++|+++|+|||+++++.....
T Consensus        83 GsfTgLRVG~~~AkgLa~al~iPlv~vs~lea~a~~~~~~~  123 (165)
T 3en9_A           83 GLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTT  123 (165)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTCCEEEEEHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHC
T ss_conf             61887999999999999855998366424664200102211


No 3  
>>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* (A:1-118,A:283-330)
Probab=99.93  E-value=7e-26  Score=187.98  Aligned_cols=105  Identities=21%  Similarity=0.395  Sum_probs=96.6

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEE------------CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
Q ss_conf             92788621680127899977981399999984------------226899989999999997609998786654303785
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKN------------LGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP   68 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~------------~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP   68 (206)
                      |+||+||||++.+|+||+++  +++++....+            ..|.|++.|+++|+++|+++|++++|||.|+|+.||
T Consensus         1 M~ILgIeTS~~~~svalv~d--g~il~~~~~~~~~~~~g~~~~~~~~~Hs~~l~~~i~~~L~~agi~~~did~Iavt~GP   78 (166)
T 2ivn_A            1 MLALGIEGTAHTLGIGIVSE--DKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGP   78 (166)
T ss_dssp             CCEEEEECSSSEEEEEEECS--SCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEES
T ss_pred             CEEEEEECCCCCEEEEEEEC--CEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
T ss_conf             91999985661308999989--9999998886444779838179999999999999999999739984314225675057


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf             432024668999999997326871103838999987521
Q gi|254780429|r   69 GSFTGVRVSIAVARGISLVLKQPALGVGNLEVLARAHLD  107 (206)
Q Consensus        69 GSFTGlRigia~akgLa~~~~~pv~gvssle~la~~~~~  107 (206)
                      |||||+|+|+++||+|++++++|+++|+|++++|.++..
T Consensus        79 Gs~tgLRvg~~~Ak~La~~~~iPlv~V~hl~aha~sa~~  117 (166)
T 2ivn_A           79 GLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM  117 (166)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGGG
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf             643127999999999886426552020269999985551


No 4  
>>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} (A:1-126,A:288-334)
Probab=99.91  E-value=1.4e-24  Score=179.45  Aligned_cols=106  Identities=28%  Similarity=0.375  Sum_probs=95.8

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEE------------CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
Q ss_conf             92788621680127899977981399999984------------226899989999999997609998786654303785
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKN------------LGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP   68 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~------------~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP   68 (206)
                      |+||+||||++.+|+||++++  ++++....+            ..|.|++.|.++|+++|+++|++++|||+|+++.||
T Consensus         6 M~ILgIeTS~~~~svAl~~dg--~il~~~~~e~~~~~~g~~~~~a~~~H~~~l~~~i~~~L~~agi~~~diD~Vavs~GP   83 (173)
T 3eno_A            6 MIVLGLEGTAHTISCGIIDES--RILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSMGP   83 (173)
T ss_dssp             CEEEEEECSSSEEEEEEEESS--CCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS
T ss_pred             CEEEEEECCCCCEEEEEEECC--EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
T ss_conf             579999756431189999899--898999997227879867589999999999999999999759864120057740335


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             4320246689999999973268711038389999875214
Q gi|254780429|r   69 GSFTGVRVSIAVARGISLVLKQPALGVGNLEVLARAHLDS  108 (206)
Q Consensus        69 GSFTGlRigia~akgLa~~~~~pv~gvssle~la~~~~~~  108 (206)
                      |+|||+|+|++++|+|++++++|+++|++++++|.+....
T Consensus        84 G~~t~Lrvg~~~ak~la~~~~~Plv~V~hl~aHa~s~~~~  123 (173)
T 3eno_A           84 GLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRRV  123 (173)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf             6554504677898888752253420323499998875440


No 5  
>>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Thermotoga maritima MSB8} (A:1-104,A:174-218)
Probab=99.91  E-value=1e-24  Score=180.44  Aligned_cols=98  Identities=28%  Similarity=0.312  Sum_probs=88.1

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf             92788621680127899977981399999984226899989999999997609998786654303785432024668999
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAV   80 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~   80 (206)
                      |+||+||||++. ++|+++++   .+.+..+..+|+|++.|+|+|+++|++++++++|||+|+|++|||||||||||+++
T Consensus        13 ~~ILaIDTS~~~-sVAi~~~~---~il~~~~~~~r~hse~L~p~Ie~lL~~a~l~~~dId~Iavs~GPGSFTGLRIGls~   88 (149)
T 2a6a_A           13 XNVLALDTSQRI-RIGLRKGE---DLFEISYTGEKKHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIAT   88 (149)
T ss_dssp             CEEEEEECSSSE-EEEEEETT---EEEEEEEESCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHH
T ss_pred             CEEEEEECCCCC-EEEEEECC---EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCHHHHHHHHH
T ss_conf             603207616437-79999899---99999702767999999999999999849997980003661588752106789999


Q ss_pred             HHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             9999973268711038389999
Q gi|254780429|r   81 ARGISLVLKQPALGVGNLEVLA  102 (206)
Q Consensus        81 akgLa~~~~~pv~gvssle~la  102 (206)
                      ||||++++++|++|||--..+.
T Consensus        89 AKgLa~~~~iPligVs~~~~~~  110 (149)
T 2a6a_A           89 VVGLVSPYDIPVAPLNISPAVL  110 (149)
T ss_dssp             HHHHHGGGTCCEEEECCCHHHH
T ss_pred             HHHHHHHCCCCCCCCCCCHHHH
T ss_conf             9889863688601467499999


No 6  
>>2gel_A Putative GRAM negative resuscitation promoting factor; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium LT2} PDB: 2gem_A 1okj_A (A:94-189)
Probab=98.76  E-value=3.2e-08  Score=73.30  Aligned_cols=76  Identities=16%  Similarity=0.193  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEECC----CCCCCCCCCCHHHHHHHHCC--CCEEEECCCHHHCCCC
Q ss_conf             38999987521467865999850871417999996178----31145110699999884227--7759982713314222
Q gi|254780429|r   97 NLEVLARAHLDSHVGRPIMVLVSLFHQKVCCQKFSLDG----VSCSDPVLLNYEQTRSEVDN--FEGEIVGSGLSAIRGI  170 (206)
Q Consensus        97 sle~la~~~~~~~~~~~i~~~idArr~~~y~~~~~~~g----~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~  170 (206)
                      ||++||.+++.......+++++||||+|||++.|+.++    ..+.++.+++.+++.+.+..  .+..++|+|+..+.+.
T Consensus         1 TL~alA~~~~~~~~~~~v~~~iDAR~~eVY~a~Y~~~~~g~~~~~~~~~v~~~~~l~~~l~~~~~~~~~vG~g~~~y~e~   80 (96)
T 2gel_A            1 TLATMAQGAWRKTGATRVLAAIDARMGEVYWAEYQRDAQGVWQGEETEAVLKPERVGERLKQLSGEWATVGTGWSAWPDL   80 (96)
T ss_dssp             HHHHHHHHHHHHHCCSEEEEEEEETTTEEEEEEEEECTTSCEECGGGCEEECHHHHHHHHTTCCSCEEEESTHHHHSTHH
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCEEECCHHHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHH
T ss_conf             79999998776328664315676478848999998579985132240210899999999864047627854488889999


Q ss_pred             CC
Q ss_conf             36
Q gi|254780429|r  171 EN  172 (206)
Q Consensus       171 ~~  172 (206)
                      ..
T Consensus        81 l~   82 (96)
T 2gel_A           81 AK   82 (96)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             87


No 7  
>>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} (A:1-172,A:333-381)
Probab=96.56  E-value=0.024  Score=35.13  Aligned_cols=94  Identities=15%  Similarity=0.214  Sum_probs=63.4

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCH----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC--
Q ss_conf             92788621680127899977981399999984226----------899989999999997609998786654303785--
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGR----------GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP--   68 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r----------~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP--   68 (206)
                      |+||+|+--+..+-+|+++++  +.++........          .|-+.=...|.+.|++.|+++.++|+|+.--|-  
T Consensus         2 ~kILvINPGSTSTKIAvfe~e--~~v~~~~i~H~~eEL~~f~~i~dQ~~~R~~~I~~~L~e~gi~~~~ldAVVgRGGll~   79 (221)
T 1saz_A            2 FRILTINPGSTSTKLSIFEDE--RXVKXQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAFVSRGGLLD   79 (221)
T ss_dssp             CEEEEEEECSSEEEEEEEETT--EEEEEEEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEEEEECCSCS
T ss_pred             CEEEEECCCCHHHEEEEEECC--CCEEECEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf             749998578175623789388--612344214321010444530105889999999999876998351477998089876


Q ss_pred             ----CCC-----------HHHH------HHHHHHHHHHHHCCCCCCCCC
Q ss_conf             ----432-----------0246------689999999973268711038
Q gi|254780429|r   69 ----GSF-----------TGVR------VSIAVARGISLVLKQPALGVG   96 (206)
Q Consensus        69 ----GSF-----------TGlR------igia~akgLa~~~~~pv~gvs   96 (206)
                          |-|           .|..      .|.-.|..||...|+|-+-|+
T Consensus        80 Pi~gGtY~Vne~Ml~dL~~~~~g~HaSNLGa~iA~~lA~~~gipAfIvD  128 (221)
T 1saz_A           80 PIPGGVYLVDGLXIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVD  128 (221)
T ss_dssp             CBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEES
T ss_pred             CCCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEC
T ss_conf             5069718767999999874678777014899999998578999758868


No 8  
>>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} (A:)
Probab=96.24  E-value=0.033  Score=34.17  Aligned_cols=100  Identities=13%  Similarity=0.131  Sum_probs=76.6

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEE--EEEEE-EECCHH---HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
Q ss_conf             278862168012789997798139--99999-842268---999899999999976099987866543037854320246
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRI--LGSYF-KNLGRG---HAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVR   75 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~--~~~~~-~~~~r~---hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlR   75 (206)
                      .||+||-|+..+.+|+++.+.++.  +..-. ...+..   ....|.-.+.+++++.+.+.--|..+.++..+.+...+-
T Consensus         2 rvLgiDpg~~~tG~av~~~~~~~~~~i~~g~i~~~~~~~~~R~~~i~~~l~~~l~~~~p~~v~iE~~~~~~~~~s~~~l~   81 (158)
T 1hjr_A            2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLG   81 (158)
T ss_dssp             EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHH
T ss_pred             EEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHH
T ss_conf             89998457784689999966997899995348459877799999999999999863598669998412215735788899


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf             68999999997326871103838999
Q gi|254780429|r   76 VSIAVARGISLVLKQPALGVGNLEVL  101 (206)
Q Consensus        76 igia~akgLa~~~~~pv~gvssle~l  101 (206)
                      -...++.+.+...++|+.-|+-.+.-
T Consensus        82 ~~~G~i~~~~~~~~ipi~~v~P~~vK  107 (158)
T 1hjr_A           82 QARGVAIVAAVNQELPVFEYAARQVK  107 (158)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEECHHHHH
T ss_conf             99999999999759738997689988


No 9  
>>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} (A:1-95,A:239-270)
Probab=96.01  E-value=0.01  Score=37.53  Aligned_cols=96  Identities=15%  Similarity=0.205  Sum_probs=73.3

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCCCHH---HH-
Q ss_conf             927886216801278999779813999999842268999899999999976099987866543037-8543202---46-
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGSFTG---VR-   75 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGSFTG---lR-   75 (206)
                      |.+|+||--|..+-++|++.+ ++++.......+ ...+.+...++++|++++.++.+|.+|.++. |++..-.   -+ 
T Consensus         3 ~y~LGIDiGtTsvKavl~D~d-G~iia~~~~~t~-~~~~~i~~~i~~~L~~~~~~~~~I~gIgvtg~g~~~v~~d~~g~~   80 (127)
T 1hux_A            3 IYTLGIDVGSTASKCIILKDG-KEIVAKSLVAVG-TGTSGPARSISEVLENAHMKKEDMAFTLATGYGRNSLEGIADKQM   80 (127)
T ss_dssp             CEEEEEEECSSEEEEEEEETT-TEEEEEEEEECC-SSCCHHHHHHHHHHHHHTCCGGGCSEEEEESTTTTTTTTTCSEEE
T ss_pred             EEEEEECCCCCCEEEEEECCC-CEEEEEEEECCC-CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf             389853147741137998353-023225662269-986338999999998625886355578513536556666644322


Q ss_pred             -HHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf             -68999999997326871103838
Q gi|254780429|r   76 -VSIAVARGISLVLKQPALGVGNL   98 (206)
Q Consensus        76 -igia~akgLa~~~~~pv~gvssl   98 (206)
                       +--.-.++..+...-|+..++--
T Consensus        81 ~~~w~d~Rga~~~~~~~~~~~~~~  104 (127)
T 1hux_A           81 SELSCHAMGASFIWPSPLAQYNGA  104 (127)
T ss_dssp             CHHHHHHHHHHHHCTCGGGGGHHH
T ss_pred             HEEECCCCCCEEECCCCHHHHHHH
T ss_conf             202211044304557812765116


No 10 
>>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} (X:1-92,X:240-268)
Probab=95.51  E-value=0.028  Score=34.63  Aligned_cols=87  Identities=14%  Similarity=0.239  Sum_probs=59.7

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEE-EECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCCCHHHHHHHH
Q ss_conf             27886216801278999779813999999-842268999899999999976099987866543037-8543202466899
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYF-KNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGSFTGVRVSIA   79 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~-~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGSFTGlRigia   79 (206)
                      |+|+||--+.++.+++++++  +++.... .+..++-+..+...+..+++..++++++|+.++++. =|.      +.-+
T Consensus         1 MLLaIDIGNTniv~Glfdg~--~l~~~~Ri~T~~~~T~DE~~~~l~~ll~~~~i~~~~I~~iiISSVVP~------lt~~   72 (121)
T 2h3g_X            1 MIFVLDVGNTNAVLGVFEEG--ELRQHWRMETDRHKTEDEYGMLVKQLLEHEGLSFEDVKGIIVSSVVPP------IMFA   72 (121)
T ss_dssp             CEEEEEECSSEEEEEEEETT--EEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCHH------HHHH
T ss_pred             CEEEEEECCCCEEEEEEECC--EEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH------HHHH
T ss_conf             98999987550099999899--999999983587677789999999999864887543224786310487------9999


Q ss_pred             HHHHHHHHCCCCCCCCC
Q ss_conf             99999973268711038
Q gi|254780429|r   80 VARGISLVLKQPALGVG   96 (206)
Q Consensus        80 ~akgLa~~~~~pv~gvs   96 (206)
                      +.+.+-.-++++.+-|+
T Consensus        73 l~~a~k~~f~~~PlvV~   89 (121)
T 2h3g_X           73 LERMCEKYFKIKPLVVG   89 (121)
T ss_dssp             HHHHHHHHTCCCCEECS
T ss_pred             HHHHHHHHCCCCEEEEC
T ss_conf             99999983687529963


No 11 
>>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima} (A:1-164,A:386-403)
Probab=94.70  E-value=0.33  Score=27.73  Aligned_cols=98  Identities=20%  Similarity=0.253  Sum_probs=65.1

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEE----------------------CCHHHHHHHHHHHHHHHHHHCC----
Q ss_conf             92788621680127899977981399999984----------------------2268999899999999976099----
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKN----------------------LGRGHAEHLMPAIDYALKDSRL----   54 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~----------------------~~r~hs~~L~~~i~~lL~~~~~----   54 (206)
                      |+||+|++-+..+-+||++.+..+.+++-...                      ....|.+.+-.+++.+ .+.++    
T Consensus         1 MkILviN~GSSSlK~alf~~~~~~~l~~g~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~il~~L-~~~~~~~~~   79 (182)
T 2iir_A            1 MRVLVINSGSSSIKYQLIEMEGEKVLCKGIAERIGIEGSRLVHRVGDEKHVIERELPDHEEALKLILNTL-VDEKLGVIK   79 (182)
T ss_dssp             CEEEEEEEETTEEEEEEEETTTTEEEEEEEEECTTSTTCEEEEEETTEEEEEECCCCSHHHHHHHHHHHH-HCTTTCSCS
T ss_pred             CCEEEECCCHHHHEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHH-HHCCCCCCC
T ss_conf             9199986772736328896799847888889884599863899808830354036799999999999999-853567447


Q ss_pred             CHHHHHHHHCCCCCCC--CHH-HHHHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf             9878665430378543--202-4668999999997326871103838999
Q gi|254780429|r   55 EVSQVDRVVTALGPGS--FTG-VRVSIAVARGISLVLKQPALGVGNLEVL  101 (206)
Q Consensus        55 ~~~~id~iav~~GPGS--FTG-lRigia~akgLa~~~~~pv~gvssle~l  101 (206)
                      ++++|++|+-=.+-|.  |+| .+|.-.+...|-.  ..|+.+.+..-.+
T Consensus        80 ~~~~i~avghRvVhGG~~~~~~~~I~~~vl~~L~~--l~~lAPlHnP~~l  127 (182)
T 2iir_A           80 DLKEIDAVGHRVVHGGERFKESVLVDEEVLKAIEE--VSPLAPLHNPANL  127 (182)
T ss_dssp             CSTTCCEEEEEESCCTTTCSSCEECCHHHHHHHHH--HGGGSTTTHHHHH
T ss_pred             CHHHHEEEEEECCCCCCCCCCCEEECHHHHHHHHH--HCCCCCCCCHHHH
T ss_conf             84442057542246777678878816999999997--3667765676668


No 12 
>>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} (A:)
Probab=94.47  E-value=0.087  Score=31.46  Aligned_cols=96  Identities=16%  Similarity=0.200  Sum_probs=65.1

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC---CCCHH-HHH
Q ss_conf             92788621680127899977981399999984226899989999999997609998786654303785---43202-466
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP---GSFTG-VRV   76 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP---GSFTG-lRi   76 (206)
                      |.||+||-.+..+.+|+.+...................+.+...|.+++++.     +++.|+++.+=   |+-+- ...
T Consensus         3 mriLgiD~G~~riG~Av~d~~~~~a~~l~~i~~~~~~~~~~~~~L~~ii~~~-----~~~~iviG~p~~~~g~~~~~~~~   77 (150)
T 1vhx_A            3 LRILGLDLGTKTLGVALSDEXGWTAQGIETIKINEAEGDYGLSRLSELIKDY-----TIDKIVLGFPKNXNGTVGPRGEA   77 (150)
T ss_dssp             EEEEEEEECSSEEEEEEECTTSSSEEEEEEEECBGGGTBCCHHHHHHHHTTS-----EEEEEEEECCCCBTTBCCHHHHH
T ss_pred             CEEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH-----CCCEEEECCCCCCCCCCHHHHHH
T ss_conf             4399999279989999973898843560446503456226899999999763-----43628851642347762178899


Q ss_pred             HHHHHHHHHHHCCCCCC----CCCHHHHH
Q ss_conf             89999999973268711----03838999
Q gi|254780429|r   77 SIAVARGISLVLKQPAL----GVGNLEVL  101 (206)
Q Consensus        77 gia~akgLa~~~~~pv~----gvssle~l  101 (206)
                      ...+++.++...++|++    -.+|.++-
T Consensus        78 ~~~~~~~l~~~~~i~v~~~dE~~ss~~a~  106 (150)
T 1vhx_A           78 SQTFAKVLETTYNVPVVLWDERLTTXAAE  106 (150)
T ss_dssp             HHHHHHHHHHHHCSCEEEECCSSCHHHHH
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCHHHHH
T ss_conf             99999973557783279841555799999


No 13 
>>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} (A:1-119,A:314-347)
Probab=94.04  E-value=0.45  Score=26.81  Aligned_cols=99  Identities=15%  Similarity=0.106  Sum_probs=63.2

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCH-------HHHHHHHHHHHHHHHHHCCCH-HHHHHHHCCC-CCCCCH
Q ss_conf             2788621680127899977981399999984226-------899989999999997609998-7866543037-854320
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGR-------GHAEHLMPAIDYALKDSRLEV-SQVDRVVTAL-GPGSFT   72 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r-------~hs~~L~~~i~~lL~~~~~~~-~~id~iav~~-GPGSFT   72 (206)
                      .+|+||--+..+-+++++.+ ++++.+.....+.       .--+.+...+.+++++++++. .++..+.++. |+..=.
T Consensus         7 ~vLGIDiGgT~ir~~lvD~~-G~ii~~~~~~~~~~~~~~~e~~~~~i~~~i~~~l~~~~~~~~~~I~~igig~~G~~~~~   85 (153)
T 2ch5_A            7 IYGGVEGGGTRSEVLLVSED-GKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQED   85 (153)
T ss_dssp             EEEEEEECTTCEEEEEEETT-SCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHH
T ss_pred             EEEEEECCCCCEEEEEECCC-CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCC
T ss_conf             89999906110288999599-99999999368896658999999999999999999749997765566566652023732


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf             24668999999997326871103838999
Q gi|254780429|r   73 GVRVSIAVARGISLVLKQPALGVGNLEVL  101 (206)
Q Consensus        73 GlRigia~akgLa~~~~~pv~gvssle~l  101 (206)
                      +-.+-....+-+....++|++=.+--.+.
T Consensus        86 ~~~~~~~~i~~~~~~~~~pv~v~NDa~aa  114 (153)
T 2ch5_A           86 AGRILIEELRDRFPYLSESYLITTDAAGS  114 (153)
T ss_dssp             HHHHHHHHHHHHCTTSBSCEEEEEHHHHH
T ss_pred             CCEEECCHHHHHHCCCCCEEEEECHHHHH
T ss_conf             10030212444312678629992659999


No 14 
>>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleotide-binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O (X:1-84,X:222-244)
Probab=93.99  E-value=0.12  Score=30.66  Aligned_cols=63  Identities=19%  Similarity=0.263  Sum_probs=50.5

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECC-------------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
Q ss_conf             78862168012789997798139999998422-------------68999899999999976099987866543037
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLG-------------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL   66 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-------------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~   66 (206)
                      +|+||-.|..+-++|++.+ +++++......+             ..--+.+...+.++++++++++.+|.+|.++.
T Consensus         7 iLgIDiGTTs~Ka~lvd~~-G~iva~~~~~~~~~~~~~g~~eqdpe~iw~~i~~~i~~ll~~a~i~~~~I~~Igis~   82 (107)
T 3h3n_X            7 VMAIDQGTTSSRAIIFDRN-GKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITN   82 (107)
T ss_dssp             EEEEEECSSEEEEEEEETT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred             EEEEECCCCCHHHHEECCC-CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEC
T ss_conf             9999821112023157189-999999998367165899828989999999999999999998499878868999978


No 15 
>>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} (A:1-96,A:187-278,A:474-509)
Probab=93.87  E-value=0.076  Score=31.85  Aligned_cols=64  Identities=14%  Similarity=0.175  Sum_probs=50.0

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECC------------------------HHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf             78862168012789997798139999998422------------------------689998999999999760999878
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLG------------------------RGHAEHLMPAIDYALKDSRLEVSQ   58 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~------------------------r~hs~~L~~~i~~lL~~~~~~~~~   58 (206)
                      +|+||-.|..+-+++++.+.+++++....+.+                        ..-=+.+...++++++++++++.+
T Consensus         7 ~lgiD~GTts~ka~l~d~~~G~iia~~~~~~~~~~~~~~~~~~~~~p~~g~~Eqdp~~~w~~~~~~i~~~~~~~~i~~~~   86 (224)
T 3jvp_A            7 TIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESGVDADD   86 (224)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC---CCSC
T ss_pred             EEEEECCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             99997035452889998899909999998602443211378888678988167789999999999999999984989888


Q ss_pred             HHHHHCCC
Q ss_conf             66543037
Q gi|254780429|r   59 VDRVVTAL   66 (206)
Q Consensus        59 id~iav~~   66 (206)
                      |.+|.++-
T Consensus        87 I~aIg~s~   94 (224)
T 3jvp_A           87 VIGIGVDF   94 (224)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEC
T ss_conf             48999846


No 16 
>>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, structural genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum atcc 12472} (A:1-121,A:280-305)
Probab=93.63  E-value=0.24  Score=28.65  Aligned_cols=68  Identities=15%  Similarity=0.268  Sum_probs=54.4

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECC------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC-CCCC
Q ss_conf             78862168012789997798139999998422------689998999999999760999878665430378-5432
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLG------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG-PGSF   71 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G-PGSF   71 (206)
                      +|+||--+..+.+++++.+ ++++.......+      -...+.+...+++++++.+++.+++..+.++.| ||.-
T Consensus        13 ~LGIDiGgT~ik~~l~D~~-G~ii~~~~~~~~~~~~~~e~~~~~i~~~i~~ll~~~~i~~~~i~~~gvgi~~~g~~   87 (147)
T 1zc6_A           13 LIGVDGGGTGTRIRLHASD-GTPLAXAEGGASALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGLSGVH   87 (147)
T ss_dssp             EEEEEECSSCEEEEEEETT-CCEEEEEEESCCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEEESCCC
T ss_pred             EEEEECCCCEEEEEEECCC-CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
T ss_conf             9999928221899999899-98999999569985669999999999999999998499965554223202568765


No 17 
>>3djc_A Type III pantothenate kinase; structural genomics, putative transferase, PSI-2, protein structure initiative; 2.40A {Legionella pneumophila subsp} (A:1-123,A:243-266)
Probab=93.34  E-value=0.22  Score=28.84  Aligned_cols=74  Identities=9%  Similarity=0.100  Sum_probs=59.3

Q ss_pred             CC-EEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             92-78862168012789997798139999998422689998999999999760999878665430378543202466
Q gi|254780429|r    1 MI-VLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRV   76 (206)
Q Consensus         1 M~-iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRi   76 (206)
                      |+ +|+||-=+..+..|+++++  +++........+.-...+...+.+++++.+.++.++..++++.=-...|+.-.
T Consensus         1 M~m~L~IDIGNT~iK~al~~~~--~~~~~~~~~t~~~~~~e~~~~l~~l~~~~~~~~~~v~~v~i~sVvp~~~~~~~   75 (147)
T 3djc_A            1 MSLILCIDVGNSHIYGGVFDGD--EIKLRFRHTSKVSTSDELGIFLKSVLRENNCSPETIRKIAICSVVPQVDYSLR   75 (147)
T ss_dssp             --CEEEEEECSSEEEEEEEETT--EEEEEEEEECSCCCHHHHHHHHHHHHHTTTCCGGGCCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEEEECCCCEEEEEEECC--EEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHH
T ss_conf             9679999966761089999999--99999984688888789999999999975998788678999980657899999


No 18 
>>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, structural genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* (A:1-85,A:223-246)
Probab=93.19  E-value=0.29  Score=28.02  Aligned_cols=63  Identities=10%  Similarity=0.260  Sum_probs=48.6

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECC-------------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
Q ss_conf             278862168012789997798139999998422-------------6899989999999997609998786654303
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLG-------------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTA   65 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-------------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~   65 (206)
                      .+|+||--|..+-++|++.+ +++++......+             ..--+.+...++++++++++++++|.+|+++
T Consensus         7 yilgIDiGTTsiKa~l~D~~-G~~ia~~~~~~~~~~~~~g~~Eqdp~~~w~~i~~~i~~ll~~~~i~~~~I~aIgis   82 (109)
T 3g25_A            7 YILSIDQGTTSSRAILFNQK-GEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVXTEVINENDVRADQIAGIGIT   82 (109)
T ss_dssp             EEEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEE
T ss_pred             EEEEEECCCCCCHHHEECCC-CCEEEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEE
T ss_conf             78999840204011068499-98999999706712489980788999999999999999998759997677899997


No 19 
>>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} (A:1-74,A:255-284,A:436-494)
Probab=93.03  E-value=0.15  Score=29.98  Aligned_cols=98  Identities=16%  Similarity=0.148  Sum_probs=70.3

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECCH---HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC-CCHHHHHH-
Q ss_conf             788621680127899977981399999984226---8999899999999976099987866543037854-32024668-
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLGR---GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPG-SFTGVRVS-   77 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r---~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPG-SFTGlRig-   77 (206)
                      +|+||.-|..+.++|++.+.++++.....+.+-   ...+.+...+.+++++. ++..+|.+|.++. +| -==++|-. 
T Consensus         7 ~lgID~Gtt~~k~~l~d~~~g~ii~~~~~p~~g~~e~d~~~~~~~~~~~~~~~-~~~~~I~aIgis~-~~gv~~~~~~~l   84 (163)
T 3i8b_A            7 VAGVDTSTQSCKVRVTDAETGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQA-GGLDDVSALAVGG-QQPAIAGKNVEG   84 (163)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEECCSSSEECTHHHHHHHHHHHHHT-TCSTTEEEEEEEE-CSTTTTTTTSTT
T ss_pred             EEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCEECHHHHHHHHHHHHHHH-CCCCCCEEEEEEC-CCHHHHHCCCCC
T ss_conf             99997255034889998999969999960088981089999999999999972-7710446999946-879997538887


Q ss_pred             ----------------------HHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             ----------------------9999999973268711038389999
Q gi|254780429|r   78 ----------------------IAVARGISLVLKQPALGVGNLEVLA  102 (206)
Q Consensus        78 ----------------------ia~akgLa~~~~~pv~gvssle~la  102 (206)
                                            =-..|-++-.+++|+.-+..-|+-+
T Consensus        85 ~~~~~~g~~i~~i~~~GGgsrs~~~~qi~adv~g~~v~~~~~~E~~a  131 (163)
T 3i8b_A           85 GCLLAPGGGDNAXASLGLGXKSEAIRTLAPSILGXDVTRPATDEYVA  131 (163)
T ss_dssp             CCEECCCEEHHHHHHHHTTCGCHHHHHHHHHHHTSCEEEECCCCHHH
T ss_pred             CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHH
T ss_conf             76424655655665403455088999999998799469678885899


No 20 
>>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis V583} (A:1-131,A:308-326)
Probab=92.43  E-value=0.62  Score=25.92  Aligned_cols=101  Identities=13%  Similarity=0.063  Sum_probs=73.6

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCH-----HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CC-------
Q ss_conf             2788621680127899977981399999984226-----8999899999999976099987866543037-85-------
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGR-----GHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GP-------   68 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r-----~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GP-------   68 (206)
                      .+++||-.+..+.++|++.+ ++++.+...+.+.     .--+.+...+++++++++.+..++..|.++. ||       
T Consensus         7 ~~iGIdig~t~i~~~l~Dl~-g~ii~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gIgia~pg~vd~~~~~   85 (150)
T 2qm1_A            7 KIIGIDLGGTTIKFAILTTD-GVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNXKKEDFVGIGXGTPGSVDIEKGT   85 (150)
T ss_dssp             EEEEEEECSSEEEEEEEETT-CCEEEEEEEECCCTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEETTTTE
T ss_pred             EEEEEEECCCEEEEEEECCC-CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC
T ss_conf             69999987233899999399-98999999847988898999999999999999972455445201001223211223333


Q ss_pred             CCCHHH---HHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             432024---66899999999732687110383899998
Q gi|254780429|r   69 GSFTGV---RVSIAVARGISLVLKQPALGVGNLEVLAR  103 (206)
Q Consensus        69 GSFTGl---Rigia~akgLa~~~~~pv~gvssle~la~  103 (206)
                      -.++..   .-+....+-|+...++|++=.+.-.+.+.
T Consensus        86 i~~~~~~~~w~~~~l~~~l~~~~~~Pv~i~ND~na~al  123 (150)
T 2qm1_A           86 VVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAAL  123 (150)
T ss_dssp             EECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH
T ss_conf             34543222233451788997721530686325433344


No 21 
>>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} (A:1-164,A:384-408)
Probab=92.17  E-value=0.88  Score=24.93  Aligned_cols=99  Identities=17%  Similarity=0.165  Sum_probs=64.3

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEE-----------------------CCHHHHHHHHHHHHHHHHHHCC---
Q ss_conf             92788621680127899977981399999984-----------------------2268999899999999976099---
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKN-----------------------LGRGHAEHLMPAIDYALKDSRL---   54 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~-----------------------~~r~hs~~L~~~i~~lL~~~~~---   54 (206)
                      |+||.|++-+..+-++|++-...+.+++-...                       ....|...+-..++ .|.+.++   
T Consensus         1 MkILvIN~GSSSlKfalfd~~~~~~l~~g~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~il~-~L~~~~~~~~   79 (189)
T 1g99_A            1 MKVLVINAGSSSLKYQLIDMTNESALAVGLCERIGIDNSIITQKKFDGKKLEKLTDLPTHKDALEEVVK-ALTDDEFGVI   79 (189)
T ss_dssp             CEEEEEEECSSCEEEEEEETTTTEEEEEEEEESTTSSSCEEEEEETTSCEEEEECCCCSHHHHHHHHHH-HHTCTTTCSC
T ss_pred             CEEEEECCCHHHHEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHH-HHHHCCCCCC
T ss_conf             959998688174630789779985788867764168876168873787045422675489999999999-9985276645


Q ss_pred             -CHHHHHHHHCCCCCC--CCHH-HHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             -987866543037854--3202-46689999999973268711038389999
Q gi|254780429|r   55 -EVSQVDRVVTALGPG--SFTG-VRVSIAVARGISLVLKQPALGVGNLEVLA  102 (206)
Q Consensus        55 -~~~~id~iav~~GPG--SFTG-lRigia~akgLa~~~~~pv~gvssle~la  102 (206)
                       ++.+|++|+-=++-|  .|+| .+|.=.+...|-.  ..|+.+.+..-.++
T Consensus        80 ~~~~~I~aVgHRvVHGG~~f~~~~~I~~~vl~~L~~--l~~lAPLHnp~~L~  129 (189)
T 1g99_A           80 KDMGEINAVGHRVVHGGEKFTTSALYDEGVEKAIKD--CFELAPLHNPPNMM  129 (189)
T ss_dssp             SSGGGCCEEEEEESCCTTTCCSCEECCHHHHHHHHH--TGGGSTTTHHHHHH
T ss_pred             CCCCCEEEEEECCCCCCCCCCCCEECHHHHHHHHHH--CCCCCCCCCHHHHH
T ss_conf             770224799855644687437737713999999996--33568666877899


No 22 
>>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, glycerol metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis KOD1} (O:1-238)
Probab=91.32  E-value=0.8  Score=25.22  Aligned_cols=101  Identities=19%  Similarity=0.156  Sum_probs=63.7

Q ss_pred             CC--EEEEECCCHHHEEEEEECCCCEEEEEEEEECC-------------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
Q ss_conf             92--78862168012789997798139999998422-------------6899989999999997609998786654303
Q gi|254780429|r    1 MI--VLALDTTGADCSVAIYDSHAGRILGSYFKNLG-------------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTA   65 (206)
Q Consensus         1 M~--iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-------------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~   65 (206)
                      |.  +|+||..|..+-++|++.+ +++++......+             ...-+.+...+.+++++.+.+..+|.+|.++
T Consensus         1 M~~~~lgiD~GTts~ka~l~d~~-g~~v~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~~i~aI~~s   79 (238)
T 2zf5_O            1 MEKFVLSLDEGTTSARAIIFDRE-SNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVT   79 (238)
T ss_dssp             CCCEEEEEEECSSEEEEEEECTT-CCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred             CCCEEEEEEECCCCEEEEEEECC-CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEE
T ss_conf             99489999810304232379588-99999999977721589982899999999999999999999759995227899995


Q ss_pred             -CCCCCC----HH-----------HH-------HHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             -785432----02-----------46-------689999999973268711038389999
Q gi|254780429|r   66 -LGPGSF----TG-----------VR-------VSIAVARGISLVLKQPALGVGNLEVLA  102 (206)
Q Consensus        66 -~GPGSF----TG-----------lR-------igia~akgLa~~~~~pv~gvssle~la  102 (206)
                       .+.|-.    +|           -|       +.-....-+-...+.+..+..++.-++
T Consensus        80 ~~~~~~v~~d~~g~~~~~~i~w~D~r~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~kl~  139 (238)
T 2zf5_O           80 NQRETTLVWDKDGKPLYNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDAYFSASKLK  139 (238)
T ss_dssp             ECSSCEEEECTTCCBSSCEECTTCCTTHHHHHHHHHHHHHHHHHHHSSCCCTTSHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHH
T ss_conf             667888999899988731232155531467889876305311114478555215899999


No 23 
>>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} (A:1-241)
Probab=90.47  E-value=1.1  Score=24.43  Aligned_cols=101  Identities=14%  Similarity=0.005  Sum_probs=62.6

Q ss_pred             CC-EEEEECCCHHHEEEEEECCCCEEEEEEEEECC-------------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC-
Q ss_conf             92-78862168012789997798139999998422-------------6899989999999997609998786654303-
Q gi|254780429|r    1 MI-VLALDTTGADCSVAIYDSHAGRILGSYFKNLG-------------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTA-   65 (206)
Q Consensus         1 M~-iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-------------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~-   65 (206)
                      |+ +|+||..|..+-++|++.+ ++++++......             ..--+.+...+.+++++.+.+..++-+|.++ 
T Consensus         1 M~~~lgiDiGTts~Ka~l~d~~-g~~i~~~~~~~~~~~~~~~~~e~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   79 (241)
T 2dpn_A            1 MAFLLALDQGTTSSRAILFTLE-GRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITN   79 (241)
T ss_dssp             --CEEEEEECSSEEEEEEECTT-SCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEE
T ss_pred             CCEEEEEECCCCCEEEEEEECC-CCEEEEEEEECCEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEEEC
T ss_conf             9689999841113110178088-989999997467045899828999999999999999999997499842057999988


Q ss_pred             CCCCCC--------------HH-HHHHHHHHH---------HHHHHCCCCCCCCCHHHHHH
Q ss_conf             785432--------------02-466899999---------99973268711038389999
Q gi|254780429|r   66 LGPGSF--------------TG-VRVSIAVAR---------GISLVLKQPALGVGNLEVLA  102 (206)
Q Consensus        66 ~GPGSF--------------TG-lRigia~ak---------gLa~~~~~pv~gvssle~la  102 (206)
                      .+.|..              +- -+-+...++         -+....+.++.+..++.-+.
T Consensus        80 ~~~~~v~~~~~~~~~~~~~i~w~d~r~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~kl~  140 (241)
T 2dpn_A           80 QRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFDPYFSGTKLV  140 (241)
T ss_dssp             CSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHTSCCSCTTSHHHHHH
T ss_pred             CCCCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             9988899987899185223322352068887898862459999998789778044499999


No 24 
>>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* (A:1-266,A:476-506)
Probab=90.18  E-value=1.3  Score=23.90  Aligned_cols=67  Identities=13%  Similarity=0.185  Sum_probs=48.5

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEE-------------CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC-CCC
Q ss_conf             788621680127899977981399999984-------------226899989999999997609998786654303-785
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKN-------------LGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTA-LGP   68 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~-------------~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~-~GP   68 (206)
                      +|+||-.|..+-+++++.+ +++++.....             .+..--+.+...+.+++++.+.+..++.+|.++ .+.
T Consensus         7 vlgIDiGTtsvK~~v~d~~-g~~v~~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~i~~~~~~~~~~~~~i~aI~is~~~~   85 (297)
T 3l0q_A            7 FIGVDVGTGSARAGVFDLQ-GRXVGQASREITXFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDATCS   85 (297)
T ss_dssp             EEEEEECSSEEEEEEEETT-SCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECSC
T ss_pred             EEEEEECCCCEEEEEECCC-CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCEE
T ss_conf             9999803545255588299-989999998566276899948999999999999999999997499879959999888446


Q ss_pred             CC
Q ss_conf             43
Q gi|254780429|r   69 GS   70 (206)
Q Consensus        69 GS   70 (206)
                      |.
T Consensus        86 ~~   87 (297)
T 3l0q_A           86 LV   87 (297)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             99


No 25 
>>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* (A:1-85,A:223-247)
Probab=89.81  E-value=0.63  Score=25.87  Aligned_cols=64  Identities=17%  Similarity=0.188  Sum_probs=43.1

Q ss_pred             CC-EEEEECCCHHHEEEEEECCCCEEEEEEEEECC-------------HHHHHHHHHHHHHHHH--HHCCCHHHHHHHHC
Q ss_conf             92-78862168012789997798139999998422-------------6899989999999997--60999878665430
Q gi|254780429|r    1 MI-VLALDTTGADCSVAIYDSHAGRILGSYFKNLG-------------RGHAEHLMPAIDYALK--DSRLEVSQVDRVVT   64 (206)
Q Consensus         1 M~-iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-------------r~hs~~L~~~i~~lL~--~~~~~~~~id~iav   64 (206)
                      |. +|+||--|..+-++|++.+ +++++....+.+             ..-=+.+...++++++  +++++..+|.+|++
T Consensus         3 m~yvLgIDiGTts~Ra~l~D~~-G~iia~~~~~~~~~~~~~G~~EqDp~~~w~ai~~~i~~ll~~~~~~i~~~~I~aIgi   81 (110)
T 2w40_A            3 MNVILSIDQSTQSTKVFFYDEE-LNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGI   81 (110)
T ss_dssp             CEEEEEEEECSSEEEEEEEETT-CCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEE
T ss_pred             CCEEEEEECCHHCCHHHEECCC-CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             5599999731111012168399-989999997067536999838989999999999999999998760488566699998


Q ss_pred             C
Q ss_conf             3
Q gi|254780429|r   65 A   65 (206)
Q Consensus        65 ~   65 (206)
                      +
T Consensus        82 s   82 (110)
T 2w40_A           82 T   82 (110)
T ss_dssp             E
T ss_pred             E
T ss_conf             1


No 26 
>>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein structure initiative; 1.90A {Salmonella typhimurium} (A:1-128,A:313-327)
Probab=89.76  E-value=0.29  Score=28.05  Aligned_cols=98  Identities=11%  Similarity=0.086  Sum_probs=70.7

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCC-CHHH-----
Q ss_conf             27886216801278999779813999999842268999899999999976099987866543037-8543-2024-----
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGS-FTGV-----   74 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGS-FTGl-----   74 (206)
                      .+++||-..+.+.+++++.+ ++++.+.....+..-.+.++..+.+++++...+.+++..|+++. ||=. .+|+     
T Consensus        25 ~~igvdig~t~i~~~l~d~~-G~il~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~i~~Igia~pG~vd~~~g~i~~~~  103 (143)
T 2ap1_A           25 MYYGFDIGGTKIALGVFDST-RRLQWEKRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGTLYAAN  103 (143)
T ss_dssp             EEEEEEECSSEEEEEEEETT-CCEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSCCBCTT
T ss_pred             EEEEEEECCCEEEEEEEECC-CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf             59999936466999999099-98999999979999999999999999999888639972799996785433433345531


Q ss_pred             ---HHHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             ---66899999999732687110383899
Q gi|254780429|r   75 ---RVSIAVARGISLVLKQPALGVGNLEV  100 (206)
Q Consensus        75 ---Rigia~akgLa~~~~~pv~gvssle~  100 (206)
                         --++-+.+-|...+++|++=.+---.
T Consensus       104 ~~~w~~~~l~~~l~~~l~~PV~i~N~~~~  132 (143)
T 2ap1_A          104 VPAASGKPLRADLSARLDRDVRLDNDAGG  132 (143)
T ss_dssp             CTTTTTSCHHHHHHHHHTSCEEEEETTHH
T ss_pred             CCHHHCCCHHHHHHHHHCCCCCCCCCHHH
T ss_conf             10110142576776653465223438599


No 27 
>>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genomics consortium, SGC, transferase; 2.55A {Homo sapiens} (A:)
Probab=89.50  E-value=1.3  Score=23.79  Aligned_cols=89  Identities=15%  Similarity=0.035  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHH--HHHHHC
Q ss_conf             68999899999999976099987866543037854320246689999999973268711038-----38999--987521
Q gi|254780429|r   35 RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVG-----NLEVL--ARAHLD  107 (206)
Q Consensus        35 r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvs-----sle~l--a~~~~~  107 (206)
                      ..-.+.....++++|+++|++++|||.+.++...+.+..--....++..+.....+|.+.++     .+.++  |.....
T Consensus        53 ~~~~~La~~A~~~Al~daGi~~~dID~ii~g~~~~~~~~~~~a~~~~~~~g~~~~~~~~~v~~~cas~~~al~~Aa~~I~  132 (418)
T 2iik_A           53 TTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIR  132 (418)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHCCCHHC
T ss_conf             98999999999999987498989989999997786664657999999977999777668873467635331100120001


Q ss_pred             CCCCCEEEEE-ECCCCC
Q ss_conf             4678659998-508714
Q gi|254780429|r  108 SHVGRPIMVL-VSLFHQ  123 (206)
Q Consensus       108 ~~~~~~i~~~-idArr~  123 (206)
                      ....+.++++ .+....
T Consensus       133 sG~~~~vLvvg~e~~s~  149 (418)
T 2iik_A          133 NGSYDIGMACGVESMSL  149 (418)
T ss_dssp             TTSCSEEEEEEEEETTT
T ss_pred             CCCCCCEEECCEECCCC
T ss_conf             33455116744000256


No 28 
>>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} (A:106-216)
Probab=89.16  E-value=1  Score=24.56  Aligned_cols=67  Identities=15%  Similarity=0.222  Sum_probs=50.1

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECCH----HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
Q ss_conf             788621680127899977981399999984226----899989999999997609998786654303785432
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLGR----GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF   71 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r----~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF   71 (206)
                      +++||-++..+.++|++.+ ++++.+.....+.    .--+.+...+++++++.+....++-+|.++. ||-.
T Consensus         5 ~igidig~~~i~~~l~d~~-g~ii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~gigi~~-~g~v   75 (111)
T 1z05_A            5 FLSMRLGRGYLTIALHELG-GEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITL-PGLV   75 (111)
T ss_dssp             EEEEEEETTEEEEEEEETT-SCEEEEEEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEE-SSEE
T ss_pred             EEEEEECCCEEEEEEECCC-CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE-ECCC
T ss_conf             9999989998999999699-979999961345798789999999999999997076656246786532-0254


No 29 
>>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural genomics, transferase, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum atcc 11170} (A:1-242)
Probab=88.74  E-value=1.1  Score=24.35  Aligned_cols=67  Identities=6%  Similarity=-0.043  Sum_probs=50.8

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECC-------------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-C
Q ss_conf             278862168012789997798139999998422-------------68999899999999976099987866543037-8
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLG-------------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-G   67 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-------------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-G   67 (206)
                      .+|+||-.|..+-++|++.+ +++++......+             ...-+.+...+.+++++.+....+|.+|.++- +
T Consensus         8 ~~lgIDiGTts~Ka~l~d~~-g~~i~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ig~s~~~   86 (242)
T 3ifr_A            8 QVIGLDIGTTSTIAILVRLP-DTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGICVTGXL   86 (242)
T ss_dssp             EEEEEEECSSEEEEEEEETT-TEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEEECS
T ss_pred             EEEEEECCCCCEEEEEEECC-CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
T ss_conf             89999772223376799688-99999999856701589980899999999999999999999639886772399997852


Q ss_pred             CC
Q ss_conf             54
Q gi|254780429|r   68 PG   69 (206)
Q Consensus        68 PG   69 (206)
                      .|
T Consensus        87 ~~   88 (242)
T 3ifr_A           87 PA   88 (242)
T ss_dssp             SC
T ss_pred             CC
T ss_conf             27


No 30 
>>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} (A:1-173,A:394-415)
Probab=88.63  E-value=1.8  Score=22.95  Aligned_cols=96  Identities=14%  Similarity=0.096  Sum_probs=62.2

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEEC-------------------CHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             927886216801278999779813999999842-------------------2689998999999999760999878665
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNL-------------------GRGHAEHLMPAIDYALKDSRLEVSQVDR   61 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~-------------------~r~hs~~L~~~i~~lL~~~~~~~~~id~   61 (206)
                      |+||+|++-+..+-++|++.+..+.+++.....                   -..|.+.+..+++.+  +.+....++++
T Consensus        18 ~~ILvIN~GSSSlK~alf~~~~~~~l~~g~ie~i~~~~~~~~~~~~~~~~~~~~~~~~ai~~il~~l--~~~~~~~~i~a   95 (195)
T 2e1z_A           18 PVVLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAFLSINGDKPINLAHSNYEDALKAIAFEL--EKRDLTDSVAL   95 (195)
T ss_dssp             CEEEEEEECSSEEEEEEEETTTCCEEEEEEEESTTSSSCEEEETTSCCEECCSCCHHHHHHHHHHHH--HTTTCGGGEEE
T ss_pred             CEEEEECCCCHHHEEEEEECCCCCEEEEECEEECCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHH--HHCCCCCCCEE
T ss_conf             4699992782626438898899878987011003898866998078026315338999999999999--84686124408


Q ss_pred             HHCCCC--CCCCHH-HHHHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             430378--543202-466899999999732687110383899
Q gi|254780429|r   62 VVTALG--PGSFTG-VRVSIAVARGISLVLKQPALGVGNLEV  100 (206)
Q Consensus        62 iav~~G--PGSFTG-lRigia~akgLa~~~~~pv~gvssle~  100 (206)
                      |+.=+|  ..-|+| .||.-.+...|-.  -.|+.+.+..-.
T Consensus        96 VghRvVhGG~~f~~~~~I~~~v~~~L~~--l~~lAPlHnp~~  135 (195)
T 2e1z_A           96 IGHRIAHGGELFTQSVIITDEIIDNIRR--VSPLAPLHNYAN  135 (195)
T ss_dssp             EEEEESCCTTTCSSCEECCHHHHHHHHH--HGGGSHHHHHHH
T ss_pred             EEECCCCCCCCCCCCEECCHHHHHHHHH--HCCCCCCCCHHH
T ss_conf             9716867888877877667899999997--046887558576


No 31 
>>3eo3_A Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-acetylmannosamine kinase; non-protein kinase, sialic acid biosynthesis; 2.84A {Homo sapiens} (A:1-144,A:315-333)
Probab=88.45  E-value=0.6  Score=26.01  Aligned_cols=102  Identities=19%  Similarity=0.161  Sum_probs=70.6

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCH---HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CC-CCCHHH-
Q ss_conf             92788621680127899977981399999984226---8999899999999976099987866543037-85-432024-
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGR---GHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GP-GSFTGV-   74 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r---~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GP-GSFTGl-   74 (206)
                      +.+|+||-.+..+.+++++.+ ++++.+.....+.   .--+.+..+|++++++.+.+..++..|+++. |+ ..-+|. 
T Consensus        20 ~~vlgIdiG~t~i~~~l~D~~-G~iia~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gIgis~pg~v~~~~g~i   98 (163)
T 3eo3_A           20 LSALAVDLGGTNLRVAIVSMK-GEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIV   98 (163)
T ss_dssp             CEEEEEEECSSEEEEEEEETT-SCEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEC-----------
T ss_pred             EEEEEEEECCCEEEEEEECCC-CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
T ss_conf             028999977111999999499-9799999968999878999999999999999862136845689841564321233100


Q ss_pred             ---------HHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             ---------66899999999732687110383899998
Q gi|254780429|r   75 ---------RVSIAVARGISLVLKQPALGVGNLEVLAR  103 (206)
Q Consensus        75 ---------Rigia~akgLa~~~~~pv~gvssle~la~  103 (206)
                               ..++...+-|....++|++=.+.-.+.|.
T Consensus        99 ~~~~~~~~~~~~~~l~~~l~~~~~~pV~i~NDa~~aal  136 (163)
T 3eo3_A           99 LHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAAL  136 (163)
T ss_dssp             -------------CCHHHHHHHHCSCEEEECHHHHHHH
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHH
T ss_conf             13333455432331167776502786674044321238


No 32 
>>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Thermotoga maritima MSB8} (A:105-173)
Probab=87.34  E-value=1  Score=24.51  Aligned_cols=56  Identities=14%  Similarity=0.196  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEEC--CCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             3899998752146786599985087141799999617--8311451106999998842277
Q gi|254780429|r   97 NLEVLARAHLDSHVGRPIMVLVSLFHQKVCCQKFSLD--GVSCSDPVLLNYEQTRSEVDNF  155 (206)
Q Consensus        97 sle~la~~~~~~~~~~~i~~~idArr~~~y~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~  155 (206)
                      |||.-+.   ..+.++.+++.-.||+|--|++.|..+  .+++.+|.+.+.+++.+.....
T Consensus         1 sfema~k---s~p~dg~vlv~rrarkgy~y~avy~k~k~ln~lkepsv~sdee~~~i~ke~   58 (69)
T 2a6a_A            1 SFEXTAK---SCPADGVVLVARRARKGYHYCAVYLKDKGLNPLKEPSVVSDEELEEITKEF   58 (69)
T ss_dssp             HHHHHHH---TCSSCEEEEEEEECSTTEEEEEEEEESSSCEEEEEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHH---HHHCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHC
T ss_conf             7999997---500135534054652872999999649984221586556899999999744


No 33 
>>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, cytoplasm, thiolase fold; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... (A:)
Probab=87.28  E-value=0.95  Score=24.71  Aligned_cols=83  Identities=13%  Similarity=0.082  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHH--HHHHHC
Q ss_conf             68999899999999976099987866543037854320246689999999973268711038-----38999--987521
Q gi|254780429|r   35 RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVG-----NLEVL--ARAHLD  107 (206)
Q Consensus        35 r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvs-----sle~l--a~~~~~  107 (206)
                      +.-.+.....+.++|+++|+++++||.++++.-+..+.+--.+-.++.......++|..-++     ...++  |.....
T Consensus        25 ~~~~~La~~a~~~Al~dagl~~~~ID~iv~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~v~~~casg~~ai~~A~~~I~  104 (392)
T 2vu1_A           25 TPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQIA  104 (392)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             99999999999999987095989929999996277665556999999977999755436642565410256899999972


Q ss_pred             CCCCCEEEEE
Q ss_conf             4678659998
Q gi|254780429|r  108 SHVGRPIMVL  117 (206)
Q Consensus       108 ~~~~~~i~~~  117 (206)
                      ....+.++++
T Consensus       105 sG~~~~vLv~  114 (392)
T 2vu1_A          105 TGDASIIVAG  114 (392)
T ss_dssp             TTSCSCEEEE
T ss_pred             CCCCCEEEEE
T ss_conf             6984213410


No 34 
>>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} (A:)
Probab=87.20  E-value=0.4  Score=27.18  Aligned_cols=85  Identities=18%  Similarity=0.058  Sum_probs=51.0

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC---CCCCHHH-HH
Q ss_conf             9278862168012789997798139999998422689998999999999760999878665430378---5432024-66
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG---PGSFTGV-RV   76 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G---PGSFTGl-Ri   76 (206)
                      |.||+||--+..|.||+-+...  .++.-.....+...+..+..+.+++++.     +++.|+|+..   -|+.+.. +.
T Consensus         1 MrilgiD~G~kriGvAi~d~~~--~~a~pl~~i~~~~~~~~~~~l~~li~~~-----~v~~iVvGlP~~~~g~~~~~~~~   73 (98)
T 1iv0_A            1 MRVGALDVGEARIGLAVGEEGV--PLASGRGYLVRKTLEEDVEALLDFVRRE-----GLGKLVVGLPLRTDLKESAQAGK   73 (98)
T ss_dssp             CCEEEEEESSSEEEEEEECSCC--SSCCCEEEEECCCHHHHHHHHHHHHHHH-----TCCEEEEECCCCCCSSSCCCSST
T ss_pred             CCEEEEEECCCEEEEEEECCCC--CEEECEEEEECCCCHHHHHHHHHHHHHH-----CCCCEEECCCCCCCCCCCHHHHH
T ss_conf             9299998089989999925999--8781678898678658999999999873-----62507816897789991889999


Q ss_pred             HHHHHHHHHHHCCCCCC
Q ss_conf             89999999973268711
Q gi|254780429|r   77 SIAVARGISLVLKQPAL   93 (206)
Q Consensus        77 gia~akgLa~~~~~pv~   93 (206)
                      .-.+++-|.. .++|++
T Consensus        74 i~~f~~~l~~-~~i~v~   89 (98)
T 1iv0_A           74 VLPLVEALRA-RGVEVE   89 (98)
T ss_dssp             THHHHHHHHH-TTCEEE
T ss_pred             HHHHHHHHHH-CCCCEE
T ss_conf             9999999864-799899


No 35 
>>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics, JCSG; 2.46A {Thermotoga maritima} (A:86-211,A:358-380)
Probab=86.56  E-value=1  Score=24.51  Aligned_cols=100  Identities=18%  Similarity=0.167  Sum_probs=65.5

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECC-----HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC---HH
Q ss_conf             278862168012789997798139999998422-----6899989999999997609998786654303785432---02
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLG-----RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF---TG   73 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-----r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF---TG   73 (206)
                      .+|+||-.+....++|++.+ ++++.+...+.+     ..-.+.+...|++++++.+.+..++.+|.++. ||-.   +|
T Consensus         3 y~lGIdiG~t~i~~~l~d~~-G~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gIgia~-pG~V~~~~~   80 (149)
T 2hoe_A            3 YVLGIEVTRDEIAACLIDAS-XNILAHEAHPLPSQSDREETLNVXYRIIDRAKDXXEKLGSKLSALTVAA-PGPIDTERG   80 (149)
T ss_dssp             EEEEEEECSSEEEEEEEETT-CCEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE-SSCEETTTT
T ss_pred             CEEEEEECCCEEEEEEEECC-CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC-CCCEECCCC
T ss_conf             12578998988999999289-9899876432777789899999999999999998653178524674032-220534740


Q ss_pred             HH--------HHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             46--------6899999999732687110383899998
Q gi|254780429|r   74 VR--------VSIAVARGISLVLKQPALGVGNLEVLAR  103 (206)
Q Consensus        74 lR--------igia~akgLa~~~~~pv~gvssle~la~  103 (206)
                      ..        -+....+-+...+++|++=.+.-.+.+.
T Consensus        81 ~~~~~~~~~w~~~~~~~~l~~~~~~pv~v~NDa~~~al  118 (149)
T 2hoe_A           81 IIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADXGAV  118 (149)
T ss_dssp             EECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHH
T ss_conf             89734545646884788999874753343034058898


No 36 
>>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuclease-H fold, sugar kinase, glucose, conformational change; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* (A:1-105,A:275-299)
Probab=86.33  E-value=1.1  Score=24.18  Aligned_cols=93  Identities=18%  Similarity=0.189  Sum_probs=56.8

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHH---HHHHHHHHHHHHHHHCCCHHHHHHHHC-CCCCCCCHHHHH
Q ss_conf             9278862168012789997798139999998422689---998999999999760999878665430-378543202466
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGH---AEHLMPAIDYALKDSRLEVSQVDRVVT-ALGPGSFTGVRV   76 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~h---s~~L~~~i~~lL~~~~~~~~~id~iav-~~GPGSFTGlRi   76 (206)
                      |.+|+||-.+..+.+++++. +++++.+.....+..+   .+.+...+.+.+++.+....  +.+.+ ..|++...+.-+
T Consensus         2 ~~~iGIDiG~T~ira~l~D~-~G~ii~~~~~~t~~~~e~~~~~i~~~i~~~i~~~~~~~~--~~~gI~~~gi~~~~~~~l   78 (130)
T 2e2o_A            2 MIIVGVDAGGTKTKAVAYDC-EGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGEA--DVVGMGVAGLDSKFDWEN   78 (130)
T ss_dssp             CCEEEEEECSSCEEEEEECT-TSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSCC--SEEEEEETTCCSHHHHHH
T ss_pred             CEEEEEEECHHHEEEEEECC-CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCCCCCHHHH
T ss_conf             09999996500279999979-998999999578997510499999999999997458987--557883245678204689


Q ss_pred             HHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             899999999732687110383899
Q gi|254780429|r   77 SIAVARGISLVLKQPALGVGNLEV  100 (206)
Q Consensus        77 gia~akgLa~~~~~pv~gvssle~  100 (206)
                          ..-+....+.|++-.+--.+
T Consensus        79 ----~~~l~~~~~~Pv~l~NDara   98 (130)
T 2e2o_A           79 ----FTPLASLIAPKVIIQHDGVI   98 (130)
T ss_dssp             ----HHHHHTTSSSEEEEEEHHHH
T ss_pred             ----HHHHHHCCCCCEEEECHHHH
T ss_conf             ----99998535887899711789


No 37 
>>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} (A:326-467)
Probab=85.96  E-value=2.5  Score=21.97  Aligned_cols=87  Identities=15%  Similarity=0.146  Sum_probs=59.6

Q ss_pred             CEEEEECCCH-HHEEEEEECCCCEEEEEEEEEC--CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHH-HHHH
Q ss_conf             2788621680-1278999779813999999842--2689998999999999760999878665430378543202-4668
Q gi|254780429|r    2 IVLALDTTGA-DCSVAIYDSHAGRILGSYFKNL--GRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTG-VRVS   77 (206)
Q Consensus         2 ~iLaIdTs~~-~~sval~~~~~~~~~~~~~~~~--~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTG-lRig   77 (206)
                      +|||||--+. .+.+|+.+. .++++.......  .++-.+.....+.+++++.+     ++.|++  |.|+.+- .+..
T Consensus         5 rilaiD~G~k~riG~A~~d~-~g~i~~~~~~~~~~~~~~~~~~~~~l~~li~~~~-----~~~iVi--G~g~~~~~~~~~   76 (142)
T 3bzc_A            5 ATLGLDPGLRTGVKVAVVDA-TGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQ-----VELIAI--GNGTASRETDKL   76 (142)
T ss_dssp             CEEEEECCSSSCEEEEEECT-TSCEEEEEEECCSGGGCCHHHHHHHHHHHHHHHT-----CCEEEE--ESSTTHHHHHHH
T ss_pred             EEEEECCCCCCCEEEEEECC-CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC-----CCEEEE--CCCCHHHHHHHH
T ss_conf             16776799866259999989-9987886787568954449999999999999819-----928998--898135899999


Q ss_pred             HHHHHHHHHHCCCCCCCCC
Q ss_conf             9999999973268711038
Q gi|254780429|r   78 IAVARGISLVLKQPALGVG   96 (206)
Q Consensus        78 ia~akgLa~~~~~pv~gvs   96 (206)
                      ..+++-+..-.++|++=++
T Consensus        77 ~~~~~~l~~~~~i~V~~vD   95 (142)
T 3bzc_A           77 AGELIKKYPGMKLTKIMVS   95 (142)
T ss_dssp             HHHHHHHCGGGCCEEEEEC
T ss_pred             HHHHHHHCCCCCCEEEEEC
T ss_conf             9999986767886289933


No 38 
>>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} (A:1-244)
Probab=85.11  E-value=2.8  Score=21.71  Aligned_cols=64  Identities=17%  Similarity=0.200  Sum_probs=49.2

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECC-------------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf             78862168012789997798139999998422-------------689998999999999760999878665430378
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLG-------------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG   67 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-------------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G   67 (206)
                      +|+||--|...-++|++.+ ++++++.....+             ...-+.+...++++.++.+.+..++.+|.++..
T Consensus         4 ~lgID~GTts~ka~l~d~~-g~~i~~~~~~~~~~~~~~~~~e~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~~   80 (244)
T 2d4w_A            4 VLAIDQGTTSSRAIVFDHS-GEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITNQ   80 (244)
T ss_dssp             EEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred             EEEEEECCCCCHHEEECCC-CCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECC
T ss_conf             9999711202012078398-9899999971780338998099999999999999999999975998777579999778


No 39 
>>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} (A:1-20,A:55-323)
Probab=84.65  E-value=2.4  Score=22.16  Aligned_cols=64  Identities=9%  Similarity=0.080  Sum_probs=44.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf             26899989999999997609998786654303785432024668999999997326871103838
Q gi|254780429|r   34 GRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGNL   98 (206)
Q Consensus        34 ~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvssl   98 (206)
                      .-...+.....++++|+++|++++|||.+.++.-.+.++.--.+--++..+.. .++|.+.|+..
T Consensus        21 ~e~~~~La~~Aa~~AL~~aGi~~~dID~vi~~s~~~~~~~~~~a~~va~~lG~-~~~~~~~v~~~   84 (289)
T 3il3_A           21 DETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNI-DDAISFDLAAA   84 (289)
T ss_dssp             TCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTC-SSCEEEEECCG
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCC-CCCCEEEECCC
T ss_conf             99999999999999887525564431268730324443310567777763278-84410102212


No 40 
>>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding protein, helix-turn-helix, phosphotransferase system, metalloprotein; 2.70A {Escherichia coli} (A:83-194)
Probab=84.24  E-value=1.3  Score=23.94  Aligned_cols=91  Identities=12%  Similarity=0.171  Sum_probs=63.3

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCH----HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCC-CHHH-
Q ss_conf             2788621680127899977981399999984226----8999899999999976099987866543037-8543-2024-
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGR----GHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGS-FTGV-   74 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r----~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGS-FTGl-   74 (206)
                      .+|+||-.+..+.+++++.+ ++++.+.....+.    .--+.+...+++++++.+++..++-+|.++. |+=. -+|. 
T Consensus         4 ~~igidig~t~i~~~l~d~~-g~ii~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~~g~vd~~~~~~   82 (112)
T 1z6r_A            4 HYLSLRISRGEIFLALRDLS-SKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIV   82 (112)
T ss_dssp             EEEEEEEETTEEEEEEEETT-CCEEEEEEEECCSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTEE
T ss_pred             EEEEEEECCCEEEEEEECCC-CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEE
T ss_conf             89999988988999998799-98899999842568807999999999999999725544560079840233567787769


Q ss_pred             --------HHHHHHHHHHHHHCCCCCC
Q ss_conf             --------6689999999973268711
Q gi|254780429|r   75 --------RVSIAVARGISLVLKQPAL   93 (206)
Q Consensus        75 --------Rigia~akgLa~~~~~pv~   93 (206)
                              .-++..++-|...+++|++
T Consensus        83 ~~~~~~~~~~~~~l~~~l~~~~g~Pv~  109 (112)
T 1z6r_A           83 HRXPFYEDVKEXPLGEALEQHTGVPVY  109 (112)
T ss_dssp             EECTTCTTCSSBCHHHHHHHHHSSCEE
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf             545886544577368898765401222


No 41 
>>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} (A:)
Probab=83.01  E-value=0.75  Score=25.39  Aligned_cols=83  Identities=13%  Similarity=0.070  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHH--HHHHH
Q ss_conf             68999899999999976099987866543037-854320246689999999973268711038-----38999--98752
Q gi|254780429|r   35 RGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGSFTGVRVSIAVARGISLVLKQPALGVG-----NLEVL--ARAHL  106 (206)
Q Consensus        35 r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGSFTGlRigia~akgLa~~~~~pv~gvs-----sle~l--a~~~~  106 (206)
                      +.-.+.....+.++|+++|++++|||.+.++. .|+.+.+-...-..++...-..++|.+-|+     ...++  |....
T Consensus        24 ~~~~~L~~~A~~~Al~dAgl~~~dID~ii~g~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~v~~~cas~~~al~~A~~~I  103 (401)
T 1ulq_A           24 VRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAI  103 (401)
T ss_dssp             SCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             99999999999999998094979939899994676554413499999996696975425776325530013466798887


Q ss_pred             CCCCCCEEEEE
Q ss_conf             14678659998
Q gi|254780429|r  107 DSHVGRPIMVL  117 (206)
Q Consensus       107 ~~~~~~~i~~~  117 (206)
                      ..-....++++
T Consensus       104 ~sG~~d~vLv~  114 (401)
T 1ulq_A          104 WAGEGKVYIGS  114 (401)
T ss_dssp             HTTSCSEEEEE
T ss_pred             HCCCCCCCCEE
T ss_conf             46887654103


No 42 
>>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase, transferase; 1.60A {Burkholderia pseudomallei 1710B} PDB: 3gwe_A (A:1-41,A:77-203)
Probab=82.65  E-value=1.1  Score=24.28  Aligned_cols=92  Identities=15%  Similarity=0.163  Sum_probs=52.5

Q ss_pred             EEEEEEECC-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH-----HH
Q ss_conf             999998422-689998999999999760999878665430378543202466899999999732687110383-----89
Q gi|254780429|r   26 LGSYFKNLG-RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGN-----LE   99 (206)
Q Consensus        26 ~~~~~~~~~-r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvss-----le   99 (206)
                      +....-..+ ..-.+.....++++|++++++++|||.|+++.=.+-+..-=.+.-++..+....++|.+-++.     +.
T Consensus        33 ~~~~~~~~~des~~~LA~~A~~~aL~~agi~p~dID~iv~gs~t~~~~~~~~a~~ia~~lGl~~~~~~~~i~~aCasg~~  112 (168)
T 3gwa_A           33 IADIAGHLPRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVY  112 (168)
T ss_dssp             EEEEEEECCTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHH
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
T ss_conf             99999988999999999999999999759791206758984102566663366777765303565077661213344678


Q ss_pred             H--HHHHHHCCCCCCEEEEE
Q ss_conf             9--99875214678659998
Q gi|254780429|r  100 V--LARAHLDSHVGRPIMVL  117 (206)
Q Consensus       100 ~--la~~~~~~~~~~~i~~~  117 (206)
                      +  ++.+.......+.++++
T Consensus       113 Al~~A~~~I~aG~~~~vLvv  132 (168)
T 3gwa_A          113 GLSLAKGLVETGAARCVLLL  132 (168)
T ss_dssp             HHHHHHHHHHTTSCSEEEEE
T ss_pred             HHHHHHCEECCCCCCEEEEE
T ss_conf             87632031027985213563


No 43 
>>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* (A:1-15,A:50-172)
Probab=82.36  E-value=3.6  Score=20.99  Aligned_cols=86  Identities=17%  Similarity=0.122  Sum_probs=48.2

Q ss_pred             EECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC-----CCCHHHHH--HH
Q ss_conf             842268999899999999976099987866543037854320246689999999973268711-----03838999--98
Q gi|254780429|r   31 KNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPAL-----GVGNLEVL--AR  103 (206)
Q Consensus        31 ~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~-----gvssle~l--a~  103 (206)
                      ...+..-.+.....++++|+++++++++||.|+++..-+-+.+=-.+.-++..+.. .+.|.+     .-+.+.++  +.
T Consensus        12 ~~~~es~~~La~~A~~~aL~~agidp~~ID~vv~gs~~~~~~~~~~a~~i~~~lgl-~~~~~~~i~~~c~sg~~al~~a~   90 (138)
T 3il6_A           12 RYVPENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGA-TEAFAFDISAAXSGFVYALSMAE   90 (138)
T ss_dssp             EECCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTC-TTCEEEEECCGGGHHHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC-CCCHHHHHHCCCCCEECHHHHHC
T ss_conf             98899879999999999987531125444336884025876204688998776048-87300012034343000133320


Q ss_pred             HHHCCCCCCEEEEE
Q ss_conf             75214678659998
Q gi|254780429|r  104 AHLDSHVGRPIMVL  117 (206)
Q Consensus       104 ~~~~~~~~~~i~~~  117 (206)
                      ..........++++
T Consensus        91 ~~i~~g~~~~vLvv  104 (138)
T 3il6_A           91 KLVLSGRYQTGLVI  104 (138)
T ss_dssp             HHHHTSSCCCEEEE
T ss_pred             CHHCCCCCCCCCCC
T ss_conf             12116985443110


No 44 
>>3gbt_A Gluconate kinase; LBA0354, FGGY kinase family, carbohydrate metabolic process, transferase, structural genomics, PSI-2; 2.40A {Lactobacillus acidophilus ncfm} (A:1-237)
Probab=82.24  E-value=1.5  Score=23.41  Aligned_cols=65  Identities=12%  Similarity=0.191  Sum_probs=42.3

Q ss_pred             CC-EEEEECCCHHHEEEEEECCCCEEEEEEEEECCH---------HHHHHHHHHHHHHHHH-HCCCHHHHHHHHCCC
Q ss_conf             92-788621680127899977981399999984226---------8999899999999976-099987866543037
Q gi|254780429|r    1 MI-VLALDTTGADCSVAIYDSHAGRILGSYFKNLGR---------GHAEHLMPAIDYALKD-SRLEVSQVDRVVTAL   66 (206)
Q Consensus         1 M~-iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r---------~hs~~L~~~i~~lL~~-~~~~~~~id~iav~~   66 (206)
                      |+ +|+||-.|..+-++|++.+ ++++.+.....+.         ...+.+...+.+.+.+ .+....+|.+|.++.
T Consensus         3 m~~~lgID~GTts~ka~l~d~~-g~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~I~~I~is~   78 (237)
T 3gbt_A            3 LKYIIGXDVGTTATKGVLYDIN-GKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKIDGKIAAISWSS   78 (237)
T ss_dssp             CEEEEEEEECSSEEEEEEEETT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCSSEEEEEEEEE
T ss_pred             CCEEEEEECCCCCEEEEEEECC-CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             7789999751103100068388-989999998478316999971479999999999999999963888715999847


No 45 
>>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta- alpha-beta-alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* (A:)
Probab=81.93  E-value=0.76  Score=25.33  Aligned_cols=83  Identities=12%  Similarity=0.051  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHH--HHHHHC
Q ss_conf             68999899999999976099987866543037854320246689999999973268711038-----38999--987521
Q gi|254780429|r   35 RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVG-----NLEVL--ARAHLD  107 (206)
Q Consensus        35 r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvs-----sle~l--a~~~~~  107 (206)
                      +...+.....+.++|+++|++++|||.++++.-++++.|-..+-...........+|...++     ...++  |.....
T Consensus        30 ~s~~~L~~eA~~~Al~dagl~~~dId~vv~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~asg~~a~~~Aa~~I~  109 (395)
T 2ib8_A           30 LPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLM  109 (395)
T ss_dssp             SCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHC
T ss_conf             99999999999999987293989928999994684342558999999851457788636762355533106677887741


Q ss_pred             CCCCCEEEEE
Q ss_conf             4678659998
Q gi|254780429|r  108 SHVGRPIMVL  117 (206)
Q Consensus       108 ~~~~~~i~~~  117 (206)
                      ......++++
T Consensus       110 sG~~~~vlv~  119 (395)
T 2ib8_A          110 CGHQDVMVAG  119 (395)
T ss_dssp             TTSCSEEEEE
T ss_pred             CCCCCCEEEE
T ss_conf             7974421445


No 46 
>>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} (A:183-227,A:313-363)
Probab=81.55  E-value=0.42  Score=27.02  Aligned_cols=75  Identities=21%  Similarity=0.309  Sum_probs=53.9

Q ss_pred             CCEEEEECCCHHHEEEEEECC--CCEEEEEEEEECCHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
Q ss_conf             927886216801278999779--8139999998422689-99899999999976099987866543037854320246
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSH--AGRILGSYFKNLGRGH-AEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVR   75 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~--~~~~~~~~~~~~~r~h-s~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlR   75 (206)
                      +++|.+|--..+.-|.++.-.  .+.-+++.....+.+| -+.+...++++|++++++++|||.|...=|.-.---+|
T Consensus         6 ~~~lv~d~GGGt~Dvsi~~~~~~~~~~~~~~~a~~G~~~l~er~~~~i~~aL~~Agl~~~dId~ViLVGGSSRIP~Vq   83 (96)
T 2kho_A            6 RTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQ   83 (96)
T ss_dssp             EEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHH
T ss_pred             CEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCHHHH
T ss_conf             589999979971899999997067872899999457776599999999999998599989998899988746567999


No 47 
>>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} (A:1-122,A:314-332)
Probab=81.47  E-value=1.5  Score=23.44  Aligned_cols=98  Identities=17%  Similarity=0.135  Sum_probs=66.4

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH-----
Q ss_conf             927886216801278999779813999999842268999899999999976099987866543037854320246-----
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVR-----   75 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlR-----   75 (206)
                      |.+|+||-....+.+++++.+.+.+..........  .+.+...+++++++.+-+   +..|.++. ||-+.+-+     
T Consensus        14 ~~~lgiDIGgT~i~~al~d~~g~~i~~~~~~~t~~--~~~~~~~i~~ii~~~~~~---i~~igI~~-pG~Vd~~~~~~~n   87 (141)
T 1sz2_A           14 KYALVGDVGGTNARLALCDIASGEISQAKTYSGLD--YPSLEAVIRVYLEEHKVE---VKDGCIAI-ACPITGDWVAXTN   87 (141)
T ss_dssp             CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHSCCC---CCEEEEEE-SSCCCSSEECCSS
T ss_pred             CEEEEEEECCHHHHHEEEECCCCEEEEEEEECCCC--HHHHHHHHHHHHHHCCCC---CCEEEEEE-ECCEECCCEEEEE
T ss_conf             38999997805432546989999896888878998--768999999999866998---76589993-4673288114652


Q ss_pred             --HHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             --68999999997326871103838999987
Q gi|254780429|r   76 --VSIAVARGISLVLKQPALGVGNLEVLARA  104 (206)
Q Consensus        76 --igia~akgLa~~~~~pv~gvssle~la~~  104 (206)
                        --+...+.|....++|++=.+--.+.|..
T Consensus        88 ~~w~~~l~~~L~~~~g~pV~ieNDanaaala  118 (141)
T 1sz2_A           88 HTWAFSIAEXKKNLGFSHLEIINDFTAVSXA  118 (141)
T ss_dssp             SCCCEEHHHHHHHHTCSEEEEEEHHHHHHHH
T ss_pred             CCCCCCHHHHHHCCCCCEEEEECCCCHHHHH
T ss_conf             1336787888742256368861131203266


No 48 
>>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} (A:1-119,A:275-289)
Probab=80.44  E-value=2.9  Score=21.59  Aligned_cols=99  Identities=17%  Similarity=0.200  Sum_probs=68.0

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEEC-CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCCCH-HHH--
Q ss_conf             927886216801278999779813999999842-268999899999999976099987866543037-854320-246--
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNL-GRGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGSFT-GVR--   75 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~-~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGSFT-GlR--   75 (206)
                      |.+++||-....+.+++++-. ++++.+..... .+...+.+...+.+++++   ..+++.+|.++. ||-... |+-  
T Consensus         1 myvigidig~~~i~~~l~dl~-g~ii~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~i~gIgia~pG~v~~~~g~v~~   76 (134)
T 2aa4_A            1 MTTLAIDIGGTKLAAALIGAD-GQIRDRRELPTPASQTPEALRDALSALVSP---LQAHAQRVAIASTGIIRDGSLLALN   76 (134)
T ss_dssp             CCEEEEEECSSEEEEEEECTT-CCEEEEEEEECCSSCCHHHHHHHHHHHHTT---TGGGCSEEEEEESSEEETTEEECSS
T ss_pred             CCEEEEEECHHHEEEEEECCC-CCEEEEEEEECCCCCCHHHHHHHHHHHHHH---HHHHCCCEEEEEEEEEEECCCCEEE
T ss_conf             979999988104899999799-979999999789888999999999999999---8764374146544555410110010


Q ss_pred             -------HHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             -------6899999999732687110383899998
Q gi|254780429|r   76 -------VSIAVARGISLVLKQPALGVGNLEVLAR  103 (206)
Q Consensus        76 -------igia~akgLa~~~~~pv~gvssle~la~  103 (206)
                             -++...+-|...+++|++=.+--.+.|.
T Consensus        77 ~~~~~~w~~v~l~~~l~~~~~~Pv~i~NDan~aal  111 (134)
T 2aa4_A           77 PHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAW  111 (134)
T ss_dssp             GGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf             13555334552455555654145112301556554


No 49 
>>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} (A:)
Probab=78.89  E-value=4.6  Score=20.24  Aligned_cols=63  Identities=11%  Similarity=0.139  Sum_probs=47.1

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECC-------------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
Q ss_conf             78862168012789997798139999998422-------------68999899999999976099987866543037
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLG-------------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL   66 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~-------------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~   66 (206)
                      +|+||-.|...-++|++.+ +++++......+             ..--+.+...+.+++++.++...+|.+|.++-
T Consensus         5 ~lgiDiGTssvKa~l~d~~-g~~v~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~l~~~~~~~~~~i~~I~~s~   80 (510)
T 2p3r_A            5 IVALDQGTTSSRAVVMDHD-ANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITN   80 (510)
T ss_dssp             EEEEEECSSEEEEEEECTT-CCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE
T ss_pred             EEEEEECCCCCHHHEECCC-CCEEEEEEECCCEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEC
T ss_conf             9999820213001167198-989999996378042899908999999999999999999997599877768999978


No 50 
>>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} (D:183-227,D:312-363)
Probab=78.88  E-value=0.8  Score=25.22  Aligned_cols=75  Identities=21%  Similarity=0.302  Sum_probs=50.4

Q ss_pred             CCEEEEECCCHHHEEEEEECC--CCEEEEEEEEECCHHH--HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
Q ss_conf             927886216801278999779--8139999998422689--99899999999976099987866543037854320246
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSH--AGRILGSYFKNLGRGH--AEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVR   75 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~--~~~~~~~~~~~~~r~h--s~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlR   75 (206)
                      +++|.+|--..+.-|.++.-.  .+.-+.+.....+-.|  -+.+...++++|+++++++++||.|...=|.-----+|
T Consensus         6 ~~~~v~D~GGGT~Dvtil~~~~~~~~~~~~v~a~~G~~~lL~er~~~~i~~aL~~Agl~~~dId~ViLVGGsSRIP~Vq   84 (97)
T 1dkg_D            6 RTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQ   84 (97)
T ss_dssp             EEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHH
T ss_pred             CEEEEEEECCCEEEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCHHHHHHHH
T ss_conf             3899999789909999999976568835999980699775999999999999998498988999899989254178999


No 51 
>>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A (A:)
Probab=77.89  E-value=1.6  Score=23.27  Aligned_cols=62  Identities=15%  Similarity=0.064  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             68999899999999976099987866543037854320246689999999973268711038
Q gi|254780429|r   35 RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVG   96 (206)
Q Consensus        35 r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvs   96 (206)
                      +.-.+.....+.++|+++++++++||.++++.-.+.+++--..-..+.......++|.+.+.
T Consensus        28 ~~~~~L~~~a~~~Al~dagl~~~~Id~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   89 (397)
T 1wl4_A           28 VPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQ   89 (397)
T ss_dssp             SCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEE
T ss_conf             99999999999999987096989979899994176564535999999976996324200000


No 52 
>>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} (A:157-197,A:283-314)
Probab=77.55  E-value=2.4  Score=22.07  Aligned_cols=65  Identities=23%  Similarity=0.301  Sum_probs=45.1

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf             278862168012789997798139999998422689998999999999760999878665430378
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG   67 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G   67 (206)
                      ++|.+|--..+.-|+++.-+++. +......-...-.+..+.-++++|+.++++.+|||.|...=|
T Consensus         6 ~vlVfDlGGGTfDVSll~i~~~~-~~V~at~Gd~~LG~r~~~pv~~~L~da~l~~~dIdeViLVGG   70 (73)
T 2v7y_A            6 TILVYDLGGGTFDVSILELGDGV-FEVKATAGDNHLGERTMGPVRQALQDAGLTPADIDKVILVGG   70 (73)
T ss_dssp             EEEEEEECSSCEEEEEEEEETTE-EEEEEEEEETTCSHTTHHHHHHHHHHHTCCGGGCSEEEEESG
T ss_pred             EEEEEECCCCCEEEEEEEECCCE-EEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             89999989971899999970988-999994488775899999999999984999899958999898


No 53 
>>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A (A:1-120,A:276-302)
Probab=76.19  E-value=3.9  Score=20.76  Aligned_cols=98  Identities=9%  Similarity=0.010  Sum_probs=69.3

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCCCHH-H-----
Q ss_conf             27886216801278999779813999999842268999899999999976099987866543037-8543202-4-----
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGSFTG-V-----   74 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGSFTG-l-----   74 (206)
                      .+|+||-......+++++-+ ++++.+.......  .+.+...|.+++++...+...+..+.++. |+-...+ .     
T Consensus         4 ~~iGIdIg~t~i~~~l~Dl~-G~ii~~~~~p~~~--~~~~~~~I~~~i~~~~~~~~~i~gigi~~pG~vd~~~g~i~~~~   80 (147)
T 3epq_A            4 XLGGIEAGGTXFVCAVGRED-GTIIDRIEFPTXX--PDETIEXVIQYFSQFSLQAIGIGSFGPVDNDXTSQTYGTITATP   80 (147)
T ss_dssp             CEEEEEECSSEEEEEEECTT-SCEEEEEEEECCC--HHHHHHHHHHHHTTSCCSEEEEEECSSEECCTTSTTTTEECCCS
T ss_pred             EEEEEEECCCEEEEEEECCC-CCEEEEEEECCCC--HHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCEEECCC
T ss_conf             69999977777999999699-9599999965899--79999999999987147655881014013566641111692589


Q ss_pred             ---HHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             ---6689999999973268711038389999
Q gi|254780429|r   75 ---RVSIAVARGISLVLKQPALGVGNLEVLA  102 (206)
Q Consensus        75 ---Rigia~akgLa~~~~~pv~gvssle~la  102 (206)
                         --++.+.+-|....++|++=.+--.+.|
T Consensus        81 ~~~w~~~~L~~~L~~~~~~PV~ieNDanaaa  111 (147)
T 3epq_A           81 XAGWRHYPFLQTVXNEXXIPVGFSTDVNAAA  111 (147)
T ss_dssp             STTTBTCCHHHHHHHHHCSCEEEEEHHHHHH
T ss_pred             CCCCCCCCHHHHHHHCCCCCEEEECCHHHHH
T ss_conf             8663788549989753564579964578889


No 54 
>>2c7y_A 3-ketoacyl-COA thiolase 2; fatty acid metabolism, transferase, oxylipin synthesis, lipid synthesis, acyltransferase; 2.1A {Arabidopsis thaliana} PDB: 2c7z_A (A:)
Probab=76.06  E-value=2.6  Score=21.91  Aligned_cols=88  Identities=11%  Similarity=0.016  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCC-----CCCHHHHHH--HHHHC
Q ss_conf             89998999999999760999878665430378-54320246689999999973268711-----038389999--87521
Q gi|254780429|r   36 GHAEHLMPAIDYALKDSRLEVSQVDRVVTALG-PGSFTGVRVSIAVARGISLVLKQPAL-----GVGNLEVLA--RAHLD  107 (206)
Q Consensus        36 ~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G-PGSFTGlRigia~akgLa~~~~~pv~-----gvssle~la--~~~~~  107 (206)
                      .-.+.....++++|+++|++++|||.++++.- ++.+.+...+-...........+|..     +-+...++.  +....
T Consensus        37 s~~~L~~~A~~~Al~daGl~~~dID~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~casg~~ai~~Aa~~I~  116 (404)
T 2c7y_A           37 YPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIK  116 (404)
T ss_dssp             CTHHHHHHHHHHHHHTTTCCGGGCCEEEEECCSSCTTHHHHHHHHHHHHTTCCTTSCEEECSCSSCCSHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHCCCHHC
T ss_conf             89999999999999985979899198999960476666767999999976989520311010334545332100130002


Q ss_pred             CCCCCEEEEE-ECCCCC
Q ss_conf             4678659998-508714
Q gi|254780429|r  108 SHVGRPIMVL-VSLFHQ  123 (206)
Q Consensus       108 ~~~~~~i~~~-idArr~  123 (206)
                      .-....++++ .+....
T Consensus       117 sG~~~vvlv~g~e~~s~  133 (404)
T 2c7y_A          117 AGFYDIGIGAGLESMTT  133 (404)
T ss_dssp             TTSCSEEEEEEEECSCC
T ss_pred             CCCCCEEEEEECCCCCC
T ss_conf             89966677530155666


No 55 
>>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} (A:14-177)
Probab=73.95  E-value=3.6  Score=20.92  Aligned_cols=56  Identities=18%  Similarity=0.090  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf             899989999999997609998786654303785432024668999999997326871103838
Q gi|254780429|r   36 GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGNL   98 (206)
Q Consensus        36 ~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvssl   98 (206)
                      ...+.....+.++|+++|+++++||.+.++..-|..+.       +..++..++.|.+.+++-
T Consensus        41 ~~~~L~~~a~~~aL~~agi~~~~i~~~~~g~~~~~~~~-------~~~~~~~lg~p~~~v~~a   96 (164)
T 3lma_A           41 AERKLXEDAVQSALSKQNLKKEDIDIFLAGDLLNQNVT-------ANYVARHLKIPFLCLFGA   96 (164)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSSTT-------HHHHHHHHCCCEEEBCCS
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCHHH-------HHHHHHHCCCCEEEECCC
T ss_conf             99999999999999981989899889999970496789-------999999739988630573


No 56 
>>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, lipid metabolism, structural genomics, NPPSFA; 2.10A {Aquifex aeolicus VF5} (A:171-309)
Probab=73.58  E-value=1.7  Score=23.03  Aligned_cols=53  Identities=11%  Similarity=0.184  Sum_probs=37.4

Q ss_pred             EECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             84226899989999999997609998786654303785432024668999999997326871
Q gi|254780429|r   31 KNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPA   92 (206)
Q Consensus        31 ~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv   92 (206)
                      ....+.-.+.+.+.++++|+++|++.+|+|.+++-.+         +....+.++..+++|-
T Consensus        32 ~~v~~~~~~~~~~~~~~~l~~~g~~~~did~~~~Hq~---------~~~~~~~~~~~lg~~~   84 (139)
T 2ebd_A           32 RELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQA---------NVRIINALAEKLNIPK   84 (139)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCS---------CHHHHHHHHHHTTCCG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC---------CHHHHHHHHHHCCCCH
T ss_conf             3677888888999899999980999688234530278---------8899999998739698


No 57 
>>3hz6_A Xylulokinase; xylulose, structural genomic, manolate, transferase, structural genomics, PSI-2, protein structure initiative; HET: ADP XUL; 1.65A {Chromobacterium violaceum} (A:1-241)
Probab=72.94  E-value=6.6  Score=19.23  Aligned_cols=102  Identities=15%  Similarity=0.138  Sum_probs=58.2

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCH---------HHHHHHHHHHHHHHH---HHCCCHHHHHHHHCCC-C
Q ss_conf             92788621680127899977981399999984226---------899989999999997---6099987866543037-8
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGR---------GHAEHLMPAIDYALK---DSRLEVSQVDRVVTAL-G   67 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r---------~hs~~L~~~i~~lL~---~~~~~~~~id~iav~~-G   67 (206)
                      |.+|+||-.|..+-++|++.+ ++++++.....+.         ...+.+...+.++++   +.+.+..++.+|.++. |
T Consensus         5 ~~vlgiDiGTts~Ka~l~d~~-g~vv~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~l~~~~~~~~~i~aI~~s~~~   83 (241)
T 3hz6_A            5 FYIATFDIGTTEVKAALADRD-GGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWWQSGVDARRVSAIVLSGQX   83 (241)
T ss_dssp             CEEEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEECC
T ss_pred             EEEEEEEECCCCEEHEEEECC-CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCC
T ss_conf             279999850011012068288-9999999983572568999756899999999999999999739996564799994677


Q ss_pred             CC-------------CCHHH-HHHHHHH---------HHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             54-------------32024-6689999---------9999732687110383899998
Q gi|254780429|r   68 PG-------------SFTGV-RVSIAVA---------RGISLVLKQPALGVGNLEVLAR  103 (206)
Q Consensus        68 PG-------------SFTGl-Rigia~a---------kgLa~~~~~pv~gvssle~la~  103 (206)
                      .|             .++-. +-+...+         .-+....+.|+.+-.++--++.
T Consensus        84 ~~~v~~d~~g~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~w  142 (241)
T 3hz6_A           84 QNFLPLDQDHEPLHRAVLYSDKRPLKEAEEINARHGADNLWSALENPXTAASILPKLVF  142 (241)
T ss_dssp             SCBEEECTTSCBSSCEECTTCCCCHHHHHHHHHHHCHHHHHHHHSSCCSTTSHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf             88899999898995652147876578886555305425654304886322236789887


No 58 
>>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp} (A:1-158,A:371-384)
Probab=72.73  E-value=6.7  Score=19.20  Aligned_cols=115  Identities=10%  Similarity=0.074  Sum_probs=70.6

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEE---------------------CCHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf             2788621680127899977981399999984---------------------2268999899999999976099987866
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKN---------------------LGRGHAEHLMPAIDYALKDSRLEVSQVD   60 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~---------------------~~r~hs~~L~~~i~~lL~~~~~~~~~id   60 (206)
                      +||+|+.-+..+-++|++.++.+.+++-...                     ..-.|...+-..++.+ .+. ....+|+
T Consensus         3 kILviN~GSSSlK~alf~~~~~~~l~~g~ie~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~il~~L-~~~-~~~~~i~   80 (172)
T 3khy_A            3 EILVLNCGSSSVKFALINPHTSQSLVTGLAENIATKNCKVVFKAEHKIVKYLENGSYKDVFEXLKDFL-VEN-KHLEKIV   80 (172)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEESTTSTTCEEEEESSSEEEEECTTCCHHHHHHHHHHHH-HHT-TCGGGEE
T ss_pred             EEEEEECCHHHHHHEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHH-HHC-CCCCCEE
T ss_conf             39999387674714679789987788987865179984699954883355347789999999999998-636-9855147


Q ss_pred             HHHCCCC--CCCCHH-HHHHHHHHHHHHHHCCCCCCCCCHHHHHHH--HHHCCCCCCEEEEEECC
Q ss_conf             5430378--543202-466899999999732687110383899998--75214678659998508
Q gi|254780429|r   61 RVVTALG--PGSFTG-VRVSIAVARGISLVLKQPALGVGNLEVLAR--AHLDSHVGRPIMVLVSL  120 (206)
Q Consensus        61 ~iav~~G--PGSFTG-lRigia~akgLa~~~~~pv~gvssle~la~--~~~~~~~~~~i~~~idA  120 (206)
                      +|+.=.|  ..-|+| .||.-.+.+.|-.  -.|+.+.+..-.++.  .+.+...+-+.+++.|-
T Consensus        81 aVghRvVhgG~~~~~~~~I~~~vl~~L~~--~~~lAPlHnp~~l~~i~~~~~~~p~~p~vavFDT  143 (172)
T 3khy_A           81 AIGHRVVHGGQYFSKSVLINADSLEKIKA--CIALAPLHNPAHIEGIRFCQQIFPELPQVAVFDT  143 (172)
T ss_dssp             EEEEEESCCTTTCSSCEECSHHHHHHHHH--TGGGSTTTHHHHHHHHHHHHHHSTTSCEEEEETT
T ss_pred             EEECCCCCCCCCCCCCEECCHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             88123567786568857788999999996--3677765670268999999986799994887078


No 59 
>>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} (A:)
Probab=70.57  E-value=3.4  Score=21.15  Aligned_cols=61  Identities=13%  Similarity=0.057  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHHHHHH-CCCHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf             9998999999999760-999878665430378-543202466899999999732687110383
Q gi|254780429|r   37 HAEHLMPAIDYALKDS-RLEVSQVDRVVTALG-PGSFTGVRVSIAVARGISLVLKQPALGVGN   97 (206)
Q Consensus        37 hs~~L~~~i~~lL~~~-~~~~~~id~iav~~G-PGSFTGlRigia~akgLa~~~~~pv~gvss   97 (206)
                      -.+.....+.++|+++ |++++|||.+.++.- |+.+.+....-..+..-.....+|...++.
T Consensus        27 ~~~L~~~a~~~al~da~gl~~~dId~v~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~   89 (387)
T 3goa_A           27 AEDLSAHLXRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNR   89 (387)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEEC
T ss_pred             HHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCC
T ss_conf             999999999999972799598999999999477545441069999999779994320224324


No 60 
>>2vgn_A DOM34; translation termination factor, protein biosynthesis, translation regulation, cell division, mRNA degradation; 2.5A {Saccharomyces cerevisiae} (A:138-278)
Probab=68.72  E-value=7.5  Score=18.90  Aligned_cols=66  Identities=17%  Similarity=0.229  Sum_probs=40.9

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHH-----------HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
Q ss_conf             788621680127899977981399999984226899-----------989999999997609998786654303785432
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHA-----------EHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF   71 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs-----------~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF   71 (206)
                      ++++|.-  .+.++++.+...+.+.+.....++.|.           +..+..|-+.+.+. +++.+++.|.+ .|||-+
T Consensus         7 ~v~id~g--~A~i~ll~~~~~~~~~~i~~~ip~K~~~~g~s~~~~~~~~Ff~~V~~~~~~~-~~~~~v~~IIi-aGPGf~   82 (141)
T 2vgn_A            7 AVVLQEG--IAHVCLVTSSSTILKQKIEYSXPKKKRTTDVLKFDEKTEKFYKAIYSAXKKD-LNFDKLKTIIL-CSPGFY   82 (141)
T ss_dssp             EEEEETT--EEEEEEECSSCEEEEEEEEC---------CCSSCCHHHHHHHHHHHHHHHHH-CCTTTCSEEEE-EESTTH
T ss_pred             EEEEECC--CEEEEEECCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCEEEE-ECCHHH
T ss_conf             9999569--6899998276599999999826776776640046679999999999999987-42213647999-686899


Q ss_pred             H
Q ss_conf             0
Q gi|254780429|r   72 T   72 (206)
Q Consensus        72 T   72 (206)
                      -
T Consensus        83 K   83 (141)
T 2vgn_A           83 A   83 (141)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 61 
>>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, lipid metabolism, structural genomics, NPPSFA; 2.10A {Aquifex aeolicus VF5} (A:1-170)
Probab=68.70  E-value=7.7  Score=18.82  Aligned_cols=114  Identities=11%  Similarity=0.047  Sum_probs=61.5

Q ss_pred             EEEEECCCHHHEEEEEE-----CCC------CEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
Q ss_conf             78862168012789997-----798------1399999984226899989999999997609998786654303785432
Q gi|254780429|r    3 VLALDTTGADCSVAIYD-----SHA------GRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF   71 (206)
Q Consensus         3 iLaIdTs~~~~sval~~-----~~~------~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF   71 (206)
                      |++|.+..+.-.+..-+     +..      ..-+..+.......-.+.....++++|+++++++++||.+.++.-.+-+
T Consensus         5 i~~i~~~~P~~~v~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~La~~a~~~~L~~~~~~~~~Id~li~g~~~~~~   84 (170)
T 2ebd_A            5 IIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIAKEETITYMATQAAKEALREANLSPEELDLIILATLTPQK   84 (170)
T ss_dssp             EEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEECSSCCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSS
T ss_pred             EEEEEEECCCCEECHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCEEEEEECCCCCC
T ss_conf             99999988996282999998719988998773194588777999869999999985443145487682389985047886


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCH-----HHH--HHHHHHCCCCCCEEEEE
Q ss_conf             02466899999999732687110383-----899--99875214678659998
Q gi|254780429|r   72 TGVRVSIAVARGISLVLKQPALGVGN-----LEV--LARAHLDSHVGRPIMVL  117 (206)
Q Consensus        72 TGlRigia~akgLa~~~~~pv~gvss-----le~--la~~~~~~~~~~~i~~~  117 (206)
                      +.=-.+.-.. ......++|.+.++.     +.+  +|.+.......+.++++
T Consensus        85 ~~~~~~~~~~-~~~g~~~~~~~~v~~~C~~g~~al~~A~~~i~sg~~~~~lvv  136 (170)
T 2ebd_A           85 RFPSTACLVQ-AQLKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVI  136 (170)
T ss_dssp             SSSCHHHHHH-HHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred             CCCCCCCCCC-CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             6433222333-222457440100004401899999999999975998759999


No 62 
>>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A (A:1-231)
Probab=67.62  E-value=8.6  Score=18.49  Aligned_cols=65  Identities=17%  Similarity=0.249  Sum_probs=41.1

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCH---------HHHHHHHHHHHHHHHH--HCCCHHHHHHHHCCCC
Q ss_conf             2788621680127899977981399999984226---------8999899999999976--0999878665430378
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGR---------GHAEHLMPAIDYALKD--SRLEVSQVDRVVTALG   67 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r---------~hs~~L~~~i~~lL~~--~~~~~~~id~iav~~G   67 (206)
                      ++|+||-.|..+-+++++.+ ++++++...+.+.         ...+.+...+.+.+++  .....+++.+|.++.-
T Consensus         1 ~~lgiDiGTts~Ka~l~d~~-g~vv~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~i~~I~~s~~   76 (231)
T 2itm_A            1 MYIGIDLGTSGVKVILLNEQ-GEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQ   76 (231)
T ss_dssp             CEEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSCCTTCCEEEEEEC
T ss_pred             CEEEEEECCCCEEEEEEECC-CCEEEEEEEECCEECCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf             98999962225221278088-98999999844514589983898999999999999999997669557479999766


No 63 
>>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A (A:171-313)
Probab=67.49  E-value=8.2  Score=18.65  Aligned_cols=51  Identities=10%  Similarity=0.080  Sum_probs=36.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             226899989999999997609998786654303785432024668999999997326871
Q gi|254780429|r   33 LGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPA   92 (206)
Q Consensus        33 ~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv   92 (206)
                      ..+.-.+.+...++++|++++++++|||.+++-.+     +.+    +.+.++..+++|.
T Consensus        36 v~~~~~~~~~~~~~~~l~~~g~~~~did~~i~h~~-----~~~----~~~~~~~~lg~~~   86 (143)
T 1zow_A           36 VFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQA-----NIR----IMESARERLGISK   86 (143)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHH----HHHHHHHHHTCCG
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC-----CHH----HHHHHHHHCCCCH
T ss_conf             65655530026788898871289899888887331-----168----9999998719997


No 64 
>>3fk5_A 3-oxoacyl-synthase III; bacterial blight, XOO4209, FABH, xanthomonas oryzae PV. oryzae KACC10331, cytoplasm, multifunctional enzyme; 2.05A {Xanthomonas oryzae PV} (A:)
Probab=67.32  E-value=5.4  Score=19.82  Aligned_cols=82  Identities=13%  Similarity=0.122  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHH--HHHHHHCC
Q ss_conf             89998999999999760999878665430378543202466899999999732687110383-----899--99875214
Q gi|254780429|r   36 GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGN-----LEV--LARAHLDS  108 (206)
Q Consensus        36 ~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvss-----le~--la~~~~~~  108 (206)
                      ...+....+..++|+++++++++||.+.++..-+.+.+--...-+.+.+.....+|.+-++.     +.+  +|.+....
T Consensus        60 ~~~~la~~aa~~al~~~~~~~~~id~vi~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~~C~s~~~al~~A~~~l~~  139 (338)
T 3fk5_A           60 QASDAATQAARKALIDAGIGIEKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVANACLAFINGMDIAARMLER  139 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGEEEEEECCSSCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999984989899999999702589868869999999818999869997531267999999999888744


Q ss_pred             CCCCEEEEE
Q ss_conf             678659998
Q gi|254780429|r  109 HVGRPIMVL  117 (206)
Q Consensus       109 ~~~~~i~~~  117 (206)
                      .....++++
T Consensus       140 g~~~~~lv~  148 (338)
T 3fk5_A          140 GEIDYALVV  148 (338)
T ss_dssp             TSCSEEEEE
T ss_pred             CCCCEEEEE
T ss_conf             996459997


No 65 
>>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} (A:)
Probab=66.77  E-value=2.5  Score=22.03  Aligned_cols=86  Identities=15%  Similarity=0.050  Sum_probs=54.4

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC---CCCHH-HHHH
Q ss_conf             2788621680127899977981399999984226899989999999997609998786654303785---43202-4668
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP---GSFTG-VRVS   77 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP---GSFTG-lRig   77 (206)
                      .|||||--+..+.+|+-+... .+ +.-.....++..+.....+.+++++.     +++.|+++.+=   |+.+- -+..
T Consensus         4 rilgiD~G~kriGiAi~d~~~-~i-a~p~~~i~~~~~~~~~~~l~~li~~~-----~~~~iViGlP~~~~g~~~~~a~~v   76 (138)
T 1nu0_A            4 TLXAFDFGTKSIGVAVGQRIT-GT-ARPLPAIKAQDGTPDWNIIERLLKEW-----QPDEIIVGLPLNXDGTEQPLTARA   76 (138)
T ss_dssp             EEEEEECCSSEEEEEEEETTT-TE-EEEEEEEEEETTEECHHHHHHHHHHH-----CCSEEEEEEEECTTSCBCHHHHHH
T ss_pred             CEEEEEECCCEEEEEEECCCC-CC-CCCEEEEECCCCCHHHHHHHHHHHHC-----CCCEEEECCCCCCCCCCCHHHHHH
T ss_conf             689999179979999947998-74-01407898167726899999986424-----873899644347778757899999


Q ss_pred             HHHHHHHHHHCCCCCCC
Q ss_conf             99999999732687110
Q gi|254780429|r   78 IAVARGISLVLKQPALG   94 (206)
Q Consensus        78 ia~akgLa~~~~~pv~g   94 (206)
                      ..+++-|+...++|++=
T Consensus        77 ~~f~~~L~~~~~l~v~~   93 (138)
T 1nu0_A           77 RKFANRIHGRFGVEVKL   93 (138)
T ss_dssp             HHHHHHHHHHHCCCEEE
T ss_pred             HHHHHHHHHHHCCCEEE
T ss_conf             99999999862999699


No 66 
>>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} (A:1-120,A:236-249)
Probab=65.98  E-value=8.7  Score=18.48  Aligned_cols=70  Identities=11%  Similarity=0.001  Sum_probs=43.2

Q ss_pred             CC--EEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHH
Q ss_conf             92--788621680127899977981399999984226899989999999997609998786654303785432024
Q gi|254780429|r    1 MI--VLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGV   74 (206)
Q Consensus         1 M~--iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGl   74 (206)
                      |+  +|+||--+..+..|++++++-........... ...+.+...+++++.   ...++++.++++..=++.|..
T Consensus         1 Ms~m~L~IDiGNT~iK~a~~~~~~~~~~~~~~t~~~-~~~~el~~~l~~~~~---~~~~~i~~v~isSVvp~~~~~   72 (134)
T 3bex_A            1 MDPMYLLVDVGNTHSVFSITEDGKTFRRWRLSTGVF-QTEDELFSHLHPLLG---DAMREIKGIGVASVVPTQNTV   72 (134)
T ss_dssp             CCCEEEEEEECSSEEEEEEESSSSSCEEEEEECCTT-CCHHHHHHHHHHHHG---GGGGGEEEEEEEESCHHHHHH
T ss_pred             CCCEEEEEEECCCCEEEEEEECCEEEEEEEECCCCC-CCHHHHHHHHHHHHH---CCHHHCCEEEECCCCCHHHHH
T ss_conf             996299999277712899998999999999537876-788999999999850---104433335331258568999


No 67 
>>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis mr-1} (A:1-145,A:326-370)
Probab=65.09  E-value=9.6  Score=18.18  Aligned_cols=35  Identities=11%  Similarity=0.270  Sum_probs=21.6

Q ss_pred             CCEEEEE--CCCHHHEEEEEE--CCCCEEEEEEEEECCH
Q ss_conf             9278862--168012789997--7981399999984226
Q gi|254780429|r    1 MIVLALD--TTGADCSVAIYD--SHAGRILGSYFKNLGR   35 (206)
Q Consensus         1 M~iLaId--Ts~~~~sval~~--~~~~~~~~~~~~~~~r   35 (206)
                      |.++++-  ||.+-.-++|++  ++.-+++...+...+.
T Consensus         5 ~~~iGlMSGTSlDGID~alv~~~g~~~~~~~~~~~p~p~   43 (190)
T 3cqy_A            5 AYYIGLXSGTSXDGVDAVLVDFAGEQPQLIGTHTETIPT   43 (190)
T ss_dssp             CEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCH
T ss_pred             CEEEEEECCHHHHHHEEEEEEEECCCEEEEEEECCCCCH
T ss_conf             989998655424436258999808936998542431899


No 68 
>>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} (C:)
Probab=61.27  E-value=9.7  Score=18.17  Aligned_cols=60  Identities=13%  Similarity=0.087  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHHH-HHCCCHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             99989999999997-609998786654303785-4320246689999999973268711038
Q gi|254780429|r   37 HAEHLMPAIDYALK-DSRLEVSQVDRVVTALGP-GSFTGVRVSIAVARGISLVLKQPALGVG   96 (206)
Q Consensus        37 hs~~L~~~i~~lL~-~~~~~~~~id~iav~~GP-GSFTGlRigia~akgLa~~~~~pv~gvs   96 (206)
                      -.+.....+.++|+ .+++++++||.+.++... .++.|....-..+........+|.+.++
T Consensus        30 ~~~L~~~a~~~Al~~dagi~~~~id~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   91 (390)
T 1wdk_C           30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVS   91 (390)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEC
T ss_conf             99999999999998657969899898999957752333220999999965987534450010


No 69 
>>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* (A:1-414)
Probab=59.07  E-value=10  Score=18.01  Aligned_cols=61  Identities=7%  Similarity=-0.011  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH--HCCCCCCCCC
Q ss_conf             899989999999997609998786654303785432024668999999997--3268711038
Q gi|254780429|r   36 GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISL--VLKQPALGVG   96 (206)
Q Consensus        36 ~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~--~~~~pv~gvs   96 (206)
                      .-.+.-..+.+++|+++|++++|||.|.++.--+-++.=-.+.-+++-|..  +.+++.+.+.
T Consensus        51 ~~~~la~~Aa~~aL~~agl~p~dId~lI~at~~~~~~~p~~a~~v~~~Lg~~g~~~~~~~di~  113 (414)
T 2f82_A           51 DVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDST  113 (414)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEEC
T ss_pred             CHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEECC
T ss_conf             999999999999999759998999999999389887777669999999974389875412112


No 70 
>>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} (A:1-76,A:369-404,A:592-610)
Probab=56.98  E-value=13  Score=17.27  Aligned_cols=84  Identities=18%  Similarity=0.203  Sum_probs=48.8

Q ss_pred             CC-EEEEECCCHHHEEEEEECCC-C--EEEEEEEEE-CC----HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
Q ss_conf             92-78862168012789997798-1--399999984-22----6899989999999997609998786654303785432
Q gi|254780429|r    1 MI-VLALDTTGADCSVAIYDSHA-G--RILGSYFKN-LG----RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF   71 (206)
Q Consensus         1 M~-iLaIdTs~~~~sval~~~~~-~--~~~~~~~~~-~~----r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF   71 (206)
                      |+ |-+||--+..+.+.|-+.+. +  ++...-... .+    ..--....+.|.++|+++|++.+|+|.|-++--|=. 
T Consensus         1 mkiIaGIDiGaSat~ViLas~~~a~el~i~~~a~i~s~GikG~~pni~G~~~AI~kALekAGls~~DIdlIeINEA~m~-   79 (131)
T 2d0o_A            1 MRYIAGIDIGNSSTEVALATLDEAGALTITHSALAETTGIKGTLRNVFGIQEALALVARGAGIAVSDISLIRINEAQMA-   79 (131)
T ss_dssp             CEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECCSSTTSTTHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECCHH-
T ss_pred             CCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEE-
T ss_conf             9569898507752127889963898267752464666775674878999999999999982998777233332147200-


Q ss_pred             HHHHHHHHHHHHHHHHCCCCC
Q ss_conf             024668999999997326871
Q gi|254780429|r   72 TGVRVSIAVARGISLVLKQPA   92 (206)
Q Consensus        72 TGlRigia~akgLa~~~~~pv   92 (206)
                             ..|+-|..-+++++
T Consensus        80 -------~ia~~~~~~~~~~v   93 (131)
T 2d0o_A           80 -------MIAREIEQKLNIDV   93 (131)
T ss_dssp             -------HHHHHHHHHHCCEE
T ss_pred             -------HHHHHHHHHHCCHH
T ss_conf             -------46889999728514


No 71 
>>2gup_A ROK family protein; sugar kinase, APC80695, sucrose, structural genomics, PSI, protein structure initiative; HET: SUC; 2.01A {Streptococcus pneumoniae TIGR4} (A:1-114,A:273-292)
Probab=55.55  E-value=14  Score=17.12  Aligned_cols=95  Identities=16%  Similarity=0.159  Sum_probs=63.5

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCCC-HHH-----
Q ss_conf             27886216801278999779813999999842268999899999999976099987866543037-85432-024-----
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGSF-TGV-----   74 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGSF-TGl-----   74 (206)
                      .+++||-....+.+++++.+ ++++.+.....+.. .+.+..++++++++..     +.+|+++. ||-.. +|+     
T Consensus         5 ~~igidIg~~~i~~~lvd~~-g~il~~~~~~~~~~-~~~i~~~i~~~~~~~~-----i~gIgia~pG~vd~~~g~v~~~~   77 (134)
T 2gup_A            5 TIATIDIGGTGIKFASLTPD-GKILDKTSISTPEN-LEDLLAWLDQRLSEQD-----YSGIAXSVPGAVNQETGVIDGFS   77 (134)
T ss_dssp             CEEEEEEETTEEEEEEECTT-CCEEEEEEECCCSS-HHHHHHHHHHHHTTSC-----CSEEEEEESSEECTTTCBEESCC
T ss_pred             EEEEEEECCHHEEEEEEECC-CCEEEEEEECCCCC-HHHHHHHHHHHHHHCC-----CCEEEEEEECCEEECCCCCCCCC
T ss_conf             99999987003799999089-96999999718876-9999999999865446-----75799854042540222223533


Q ss_pred             -H--HHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             -6--6899999999732687110383899998
Q gi|254780429|r   75 -R--VSIAVARGISLVLKQPALGVGNLEVLAR  103 (206)
Q Consensus        75 -R--igia~akgLa~~~~~pv~gvssle~la~  103 (206)
                       .  -++...+-|...+++|++=-+--.+.|.
T Consensus        78 ~~~w~~~~l~~~L~~~~g~PV~i~NDa~aaAl  109 (134)
T 2gup_A           78 AVPYIHGFSWYEALSSYQLPVHLENDANCVGL  109 (134)
T ss_dssp             SSGGGSSSBHHHHTGGGCCCEEEEEHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHCCCCCEEEECCHHHHHH
T ss_conf             22235887423332048961898222116677


No 72 
>>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} (A:181-335)
Probab=55.27  E-value=7.7  Score=18.81  Aligned_cols=47  Identities=17%  Similarity=0.171  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             6899989999999997609998786654303785432024668999999997
Q gi|254780429|r   35 RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISL   86 (206)
Q Consensus        35 r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~   86 (206)
                      +.-...+.+.++++|+++|++.+|||.+++..+     +.++--.+++.+..
T Consensus        48 ~~~~~~~~~~~~~~L~~~g~~~~did~~~~hq~-----~~~~~~~~~~~lgi   94 (155)
T 1u6e_A           48 RWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQA-----NSRINELLVKNLQL   94 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCS-----CHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC-----CHHHHHHHHHHCCC
T ss_conf             655540006799998752146321231563264-----24579999997396


No 73 
>>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} (A:)
Probab=53.22  E-value=4.2  Score=20.50  Aligned_cols=58  Identities=10%  Similarity=0.065  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHHH----HHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             989999999997----6099987866543037854320246689999999973268711038
Q gi|254780429|r   39 EHLMPAIDYALK----DSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVG   96 (206)
Q Consensus        39 ~~L~~~i~~lL~----~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvs   96 (206)
                      +....++.++++    ++|+++++||.++++..+..+.+--..-.++..-.....+|...++
T Consensus        37 ~l~~~~~~~A~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~   98 (393)
T 1afw_A           37 YLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALN   98 (393)
T ss_dssp             HHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             99999999999728852489988989899983786342407999999954886433320003


No 74 
>>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus HB8} (A:169-322)
Probab=53.08  E-value=8.9  Score=18.41  Aligned_cols=48  Identities=15%  Similarity=0.070  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             899989999999997609998786654303785432024668999999997326871
Q gi|254780429|r   36 GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPA   92 (206)
Q Consensus        36 ~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv   92 (206)
                      .-.+.+..+++++|++++++++|||.+.+-.+     +.+    ..+.+...+++|.
T Consensus        49 ~~~~~~~~~~~~~l~~~g~~~~did~~i~hq~-----~~~----~~~~~~~~lg~~~   96 (154)
T 1ub7_A           49 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQA-----NLR----IIDAARERLGLPW   96 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCS-----CHH----HHHHHHHTTTCCG
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHCEEECCCC-----CHH----HHHHHHHHCCCCH
T ss_conf             55543368899999983989799240012566-----688----9999999749997


No 75 
>>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide- binding, phosphoprotein, polymorphism; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3fzh_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 1ngh_A* 1ngd_A* 1ngf_A* 1bup_A* 1nga_A* ... (A:209-250,A:335-362)
Probab=52.93  E-value=15  Score=16.85  Aligned_cols=62  Identities=26%  Similarity=0.361  Sum_probs=40.9

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf             278862168012789997798139999998422689998999999999760999878665430378
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG   67 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G   67 (206)
                      ++|.+|--..++-|+++.-+.+.+-- . ...+-.|  .=+.-+++.|++++++.+|||.|...=|
T Consensus         7 ~ilVfDlGGGTfDVSil~~~~~~~~V-~-at~GD~~--LG~~p~~~~l~da~~~~~~i~~vvlvGG   68 (70)
T 3i33_A            7 NVLIFDLGGGTFDVSILTIEDGIFEV-K-STAGDTH--LGLEPVEKALRDAKLDKGQIQEIVLVGG   68 (70)
T ss_dssp             EEEEEEECSSCEEEEEEEEETTEEEE-E-EEEEETT--CSHHHHHHHHHHHTCCGGGCCEEEEESG
T ss_pred             EEEEEEECCCEEEEEEEEEECCEEEE-E-EECCCCC--CCHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             89999938982999999994998999-9-9448988--0799999999975998777998999893


No 76 
>>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} (A:1-122,A:247-267)
Probab=51.68  E-value=16  Score=16.72  Aligned_cols=96  Identities=10%  Similarity=-0.006  Sum_probs=60.9

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECC------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC-C-------
Q ss_conf             78862168012789997798139999998422------689998999999999760999878665430378-5-------
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLG------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG-P-------   68 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G-P-------   68 (206)
                      +|+||-.+..+.+++++.+ ++++.+...+.+      -.+...+...+.+.+.+......++..+.++.. +       
T Consensus        14 ~iGIdIg~t~i~~~l~D~~-G~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~igI~~~G~v~~~~g~   92 (143)
T 1woq_A           14 LIGIDIGGTGIKGGIVDLK-KGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPVGVTFPGIIQHGVVH   92 (143)
T ss_dssp             EEEEEECSSEEEEEEEETT-TTEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHTSTTCCCTTCCEEEEESSCEETTEEC
T ss_pred             EEEEEECCCEEEEEEEECC-CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEE
T ss_conf             9999977655999999899-998999999967899999999999999999998651156764401564023222220688


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             ---43202466899999999732687110383899
Q gi|254780429|r   69 ---GSFTGVRVSIAVARGISLVLKQPALGVGNLEV  100 (206)
Q Consensus        69 ---GSFTGlRigia~akgLa~~~~~pv~gvssle~  100 (206)
                         ..+.|.| ++.+.+-|....++|++=-+.-|+
T Consensus        93 v~~~~~~~w~-~~~l~~~L~~~~g~PV~i~N~~~~  126 (143)
T 1woq_A           93 SAANVDKSWL-NTDIDALLTARLGRPVEVINRNEA  126 (143)
T ss_dssp             CCTTSCGGGT-TCBHHHHHHHHHTSCEEEEESTTH
T ss_pred             EEECCCCCCC-CCHHHHHHHHHHHHCHHCCCCCCH
T ss_conf             8631355543-111688998763102011658979


No 77 
>>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* (A:198-359)
Probab=49.94  E-value=17  Score=16.55  Aligned_cols=78  Identities=19%  Similarity=0.224  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC---------CCCCHHHHHHHHH
Q ss_conf             6899989999999997609998786654303785432024668999999997326871---------1038389999875
Q gi|254780429|r   35 RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPA---------LGVGNLEVLARAH  105 (206)
Q Consensus        35 r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv---------~gvssle~la~~~  105 (206)
                      +.-.+.+.++++++|+++|++++|||.+++-.+     +.|+--.+++-+.....+-.         .+.+.+-++....
T Consensus        53 ~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hq~-----~~~~~~~~~~~l~~~~ek~~~~~~~~GN~~sas~~~~L~~~~  127 (162)
T 3h78_A           53 EHASQTLVRIAGEMLAAHELTLDDIDHVICHQP-----NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFW  127 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHG
T ss_pred             HHHHHCCCHHHHCCCCCCCCCCCCCCEEEECCC-----CHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             533210201220134323477555537883377-----799999999980969888266685127338889999999984


Q ss_pred             HCCCCCCEEEEE
Q ss_conf             214678659998
Q gi|254780429|r  106 LDSHVGRPIMVL  117 (206)
Q Consensus       106 ~~~~~~~~i~~~  117 (206)
                      ...+.+..++.+
T Consensus       128 ~~l~~Gd~vll~  139 (162)
T 3h78_A          128 PDIQPGQRVLVL  139 (162)
T ss_dssp             GGSCTTCEEEEE
T ss_pred             CCCCCCCEEEEE
T ss_conf             726999989999


No 78 
>>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii DSM2661} (A:)
Probab=48.98  E-value=9.7  Score=18.17  Aligned_cols=59  Identities=15%  Similarity=0.172  Sum_probs=42.4

Q ss_pred             HHHHHHHHCC---------CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHH
Q ss_conf             9999976099---------9878665430378543202466899999999732687110383-899998
Q gi|254780429|r   45 IDYALKDSRL---------EVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGN-LEVLAR  103 (206)
Q Consensus        45 i~~lL~~~~~---------~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvss-le~la~  103 (206)
                      +.+.|++.|.         ++++.|+|+++=||++-.--.-....+.-.+...++|++|++- +++|+.
T Consensus        15 ~~~~l~~~g~~~~~~~~~~~l~~~dgivi~GG~~~~~~~~~~~~~li~~~~~~~~PilGiC~G~Q~l~~   83 (186)
T 2ywj_A           15 HEEAIKKAGYEAKKVKRVEDLEGIDALIIPGGESTAIGKLMKKYGLLEKIKNSNLPILGTCAGMVLLSK   83 (186)
T ss_dssp             HHHHHHHTTSEEEEECSGGGGTTCSEEEECCSCHHHHHHHHHHTTHHHHHHTCCCCEEEETHHHHHHSS
T ss_pred             HHHHHHHCCCCEEEECCHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHH
T ss_conf             999999879939998898995077868988999851221111210456775079838987134677777


No 79 
>>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural genomics, structural genomics consortium; HET: COA; 2.00A {Homo sapiens} (A:1-443)
Probab=45.10  E-value=12  Score=17.60  Aligned_cols=69  Identities=6%  Similarity=-0.054  Sum_probs=39.7

Q ss_pred             EEEEEECC-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH--CCCCCCCC
Q ss_conf             99998422-68999899999999976099987866543037854320246689999999973--26871103
Q gi|254780429|r   27 GSYFKNLG-RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLV--LKQPALGV   95 (206)
Q Consensus        27 ~~~~~~~~-r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~--~~~pv~gv   95 (206)
                      .++.+..+ ..-.+.-..+.+++|+++|++++|||.++++.--+-+.-=-.+.-+++-|...  ..++++.+
T Consensus        62 ~~R~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dIdllI~~t~t~~~~~p~~a~~v~~~Lgl~~a~~~~~~~~  133 (443)
T 2p8u_A           62 AKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDT  133 (443)
T ss_dssp             CEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCBCCEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             378848899899999999999999984999899999999927888777538999998724467776433054


No 80 
>>2a9v_A GMP synthase; NP_394403.1, , structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.24A {Thermoplasma acidophilum} (A:)
Probab=44.71  E-value=19  Score=16.28  Aligned_cols=50  Identities=14%  Similarity=0.096  Sum_probs=39.1

Q ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH
Q ss_conf             878665430378543202466899999999732687110383-89999875
Q gi|254780429|r   56 VSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGN-LEVLARAH  105 (206)
Q Consensus        56 ~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvss-le~la~~~  105 (206)
                      +...|+|.++-||++-..-.--.....-.....++|++||+- +++|+...
T Consensus        52 ~~~~dgiii~GG~~~~~~~~~~~~~~~~~~~~~~~PiLGIC~G~Qll~~a~  102 (212)
T 2a9v_A           52 LDGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGICVGAQFIALHF  102 (212)
T ss_dssp             GTTCSEEEEEEECSCGGGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHT
T ss_pred             HHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEEEC
T ss_conf             846890798357655420332124567776515832899860755654312


No 81 
>>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase, transferase; 1.60A {Burkholderia pseudomallei 1710B} PDB: 3gwe_A (A:204-365)
Probab=44.46  E-value=14  Score=17.03  Aligned_cols=50  Identities=12%  Similarity=-0.025  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             8999899999999976099987866543037854320246689999999973268
Q gi|254780429|r   36 GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQ   90 (206)
Q Consensus        36 ~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~   90 (206)
                      .-.......++++++++|++++|||.+++-.+     +.++--.+++.|......
T Consensus        60 ~~~~~~~~~~~~~l~~~g~~~~did~~~~hq~-----~~~~~~~~~~~lg~~~e~  109 (162)
T 3gwa_A           60 FSLAEVPRAADRLLALAGEPRENIDCFVLHQA-----NRFMLDALRKKMKIPEHK  109 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCC-----CHHHHHHHHHHHTCCGGG
T ss_pred             HHHHHHHCCCCCHHHHCCCCCCCCEEEEECCC-----CHHHHHHHHHHHCCCHHH
T ss_conf             44432101011002204875543338872467-----799999999981969899


No 82 
>>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} (A:)
Probab=44.06  E-value=21  Score=15.96  Aligned_cols=113  Identities=11%  Similarity=-0.001  Sum_probs=60.1

Q ss_pred             EEEEECCCHHHEEEEEE-----C-CC-----CEEEEEEEEECC-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHC-CCCCC
Q ss_conf             78862168012789997-----7-98-----139999998422-689998999999999760999878665430-37854
Q gi|254780429|r    3 VLALDTTGADCSVAIYD-----S-HA-----GRILGSYFKNLG-RGHAEHLMPAIDYALKDSRLEVSQVDRVVT-ALGPG   69 (206)
Q Consensus         3 iLaIdTs~~~~sval~~-----~-~~-----~~~~~~~~~~~~-r~hs~~L~~~i~~lL~~~~~~~~~id~iav-~~GPG   69 (206)
                      |++|.+..+...+..-+     + ..     ..-+.++..... ..-.+.-...++++|+++++++++||.+++ +.-|.
T Consensus         5 I~~ig~~lP~~~v~~~~~~~~~~~~~~~~~~~~gi~~r~~~~~~e~~~~la~~A~~~~L~~~gl~~~~Id~li~~~~~~~   84 (317)
T 1hnj_A            5 IIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSAT   84 (317)
T ss_dssp             EEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCS
T ss_pred             EEEEEEECCCCEECHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf             99999988996175999998719998999983096699984899999999999999998653356010547998015866


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHH--HHHHHHCCCCCCEEEEE
Q ss_conf             320246689999999973268711038-----3899--99875214678659998
Q gi|254780429|r   70 SFTGVRVSIAVARGISLVLKQPALGVG-----NLEV--LARAHLDSHVGRPIMVL  117 (206)
Q Consensus        70 SFTGlRigia~akgLa~~~~~pv~gvs-----sle~--la~~~~~~~~~~~i~~~  117 (206)
                      .+.+.-......  +....++|.+-+.     .+.+  +|.+.........++++
T Consensus        85 ~~~~~~a~~v~~--~~~~~~~~~~~i~~~C~g~~~al~~a~~~i~~g~~~~~lvv  137 (317)
T 1hnj_A           85 HAFPSAACQIQS--MLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVV  137 (317)
T ss_dssp             CSSSCHHHHHHH--HHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred             CCCCCHHHHHHH--HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             654368999999--85799823665245686899999999877637976669999


No 83 
>>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} (A:)
Probab=43.67  E-value=13  Score=17.32  Aligned_cols=60  Identities=15%  Similarity=0.126  Sum_probs=39.5

Q ss_pred             HHHHHHHHHCCC---------HHHHHHHHCCCCCCCCHHH---HHHHHHHHHHHHHCCCCCCCCCH-HHHHHH
Q ss_conf             999999760999---------8786654303785432024---66899999999732687110383-899998
Q gi|254780429|r   44 AIDYALKDSRLE---------VSQVDRVVTALGPGSFTGV---RVSIAVARGISLVLKQPALGVGN-LEVLAR  103 (206)
Q Consensus        44 ~i~~lL~~~~~~---------~~~id~iav~~GPGSFTGl---Rigia~akgLa~~~~~pv~gvss-le~la~  103 (206)
                      .+.+.|++.|..         +++.|.|.++=||++....   +.+..-..-.+...++|++|++- +++|+.
T Consensus        15 ~~~~~l~~~G~~v~~~~~~~~l~~~Dgiii~GGp~~~~~~~~~~~~~~~~i~~~~~~~~PilGiC~G~Q~l~~   87 (196)
T 2nv0_A           15 EHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAK   87 (196)
T ss_dssp             HHHHHHHHTTCEEEEECSGGGGGGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSB
T ss_pred             HHHHHHHHCCCCEEEECCHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCHHHHHH
T ss_conf             9999999879949998998998208879986987279999753220010223102468546874467598863


No 84 
>>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} (A:15-389)
Probab=43.09  E-value=22  Score=15.87  Aligned_cols=37  Identities=16%  Similarity=0.168  Sum_probs=27.7

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC-CCHHH
Q ss_conf             99899999999976099987866543037854-32024
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTALGPG-SFTGV   74 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~~GPG-SFTGl   74 (206)
                      ++.-..+++++|+++++++++||.|.++.--+ -+-+.
T Consensus        89 ~~la~~Aa~~aL~~~g~~~~~Id~li~~t~t~~~~~~~  126 (375)
T 1i88_A           89 PRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGA  126 (375)
T ss_dssp             HHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCH
T ss_conf             99999999999987399989999999985699987768


No 85 
>>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, acetylation, ATP-binding, calmodulin-binding, chaperone, cytoplasm; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* (A:1-38,A:137-233,A:315-399)
Probab=43.07  E-value=22  Score=15.87  Aligned_cols=113  Identities=18%  Similarity=0.192  Sum_probs=73.5

Q ss_pred             CC-EEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHH-HHHH
Q ss_conf             92-788621680127899977981399999984226899989999999997609998786654303785432024-6689
Q gi|254780429|r    1 MI-VLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGV-RVSI   78 (206)
Q Consensus         1 M~-iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGl-Rigi   78 (206)
                      |- +++||--|.+++||.+.+++-+++...   .                 .....++.++.+++++ |.+||.. |-.+
T Consensus         1 ~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~p~~v~~~vitV-P~~~t~~qr~a~   59 (220)
T 3d2f_A            1 MSTPFGLDLGNNNSVLAVARNRGIDIVVNE---V-----------------SNRSTPSNITDVCIAV-PPWYTEEQRYNI   59 (220)
T ss_dssp             -CCCEEEECCSSEEEEEEEETTEEEEECCT---T-----------------SCSSEECCCCEEEEEE-CTTCCHHHHHHH
T ss_pred             CCCEEEEECCCCCEEEEEEECCEEEEEECC---C-----------------CCCEECECCCEEEEEE-CCCCCHHHHHHH
T ss_conf             997599993722689999999975899869---9-----------------9903167987599998-798998999999


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC-----CCEEEEEECCCCCEEEEEEEEECC
Q ss_conf             99999997326871103838999987521467-----865999850871417999996178
Q gi|254780429|r   79 AVARGISLVLKQPALGVGNLEVLARAHLDSHV-----GRPIMVLVSLFHQKVCCQKFSLDG  134 (206)
Q Consensus        79 a~akgLa~~~~~pv~gvssle~la~~~~~~~~-----~~~i~~~idArr~~~y~~~~~~~g  134 (206)
                      --|--+|-.....++--++-.++++.......     ......+.|-+-+-.-+...+..+
T Consensus        60 ~~aa~~AG~~~~~li~ep~Aaa~~~g~~~~~~~~~~~~~~~~~v~D~Gggt~dvsv~~~~~  120 (220)
T 3d2f_A           60 ADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKK  120 (220)
T ss_dssp             HHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEET
T ss_pred             HHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEECC
T ss_conf             9999977998047764637889998644013455666752999998588569999999718


No 86 
>>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8} (A:)
Probab=43.04  E-value=20  Score=16.14  Aligned_cols=63  Identities=16%  Similarity=0.045  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHCCC---------HHHHHHHHCCCCCCCCHHHH----HHHHHHHHHHHHCCCCCCCCCH-HHHHHHH
Q ss_conf             99999999760999---------87866543037854320246----6899999999732687110383-8999987
Q gi|254780429|r   42 MPAIDYALKDSRLE---------VSQVDRVVTALGPGSFTGVR----VSIAVARGISLVLKQPALGVGN-LEVLARA  104 (206)
Q Consensus        42 ~~~i~~lL~~~~~~---------~~~id~iav~~GPGSFTGlR----igia~akgLa~~~~~pv~gvss-le~la~~  104 (206)
                      ...+.++|++.|..         +++.|+|.++=||++.....    -+...+...+...++|++|++- +++|+..
T Consensus        14 ~~~~~~~l~~~g~~v~~~~~~~~l~~~dgiil~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~PilGiC~G~Q~L~~~   90 (191)
T 2ywd_A           14 FREHKEALKRLGIEAKEVRKKEHLEGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKE   90 (191)
T ss_dssp             HHHHHHHHHTTTCCCEEECSGGGGTTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEE
T ss_pred             HHHHHHHHHHCCCCEEEECCHHHHHCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECHHHHHHHHC
T ss_conf             99999999987996999899899615585797697659999873430010120000004541589973434445420


No 87 
>>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens} (A:327-365,A:505-557,A:584-636,A:782-854)
Probab=41.93  E-value=15  Score=16.90  Aligned_cols=36  Identities=36%  Similarity=0.507  Sum_probs=24.4

Q ss_pred             CCCCCCHHHHH-H-----HHHHHH-HH-HHCCCCCCCCCHHHHHH
Q ss_conf             78543202466-8-----999999-99-73268711038389999
Q gi|254780429|r   66 LGPGSFTGVRV-S-----IAVARG-IS-LVLKQPALGVGNLEVLA  102 (206)
Q Consensus        66 ~GPGSFTGlRi-g-----ia~akg-La-~~~~~pv~gvssle~la  102 (206)
                      -||| |||+|- |     -+++|. |+ +.+.+|+-..+..+.+.
T Consensus        14 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~l~ip~~~~~~~~~l~   57 (218)
T 3ihp_A           14 FGPG-YTGIRNLGNSCYLNSVVQVLFSIMQLPVPMDAALNKEELL   57 (218)
T ss_dssp             CSTT-CCCBCCCSSCHHHHHHHHHHTTEEEECCCGGGCTTHHHHH
T ss_pred             CCCC-CCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCEEEEEEEE
T ss_conf             7899-7999879966699999999984300032213347766664


No 88 
>>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} (A:)
Probab=41.68  E-value=6.5  Score=19.31  Aligned_cols=31  Identities=19%  Similarity=0.327  Sum_probs=25.6

Q ss_pred             HHHHHHHHHCCCHHHHHHHHCCCCCCCCHHH
Q ss_conf             9999997609998786654303785432024
Q gi|254780429|r   44 AIDYALKDSRLEVSQVDRVVTALGPGSFTGV   74 (206)
Q Consensus        44 ~i~~lL~~~~~~~~~id~iav~~GPGSFTGl   74 (206)
                      -+.|++++-++....-..+=++.+||+||=.
T Consensus        12 KL~Ei~~~f~i~~~~~~vvDLGaaPGgwsq~   42 (191)
T 3dou_A           12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQV   42 (191)
T ss_dssp             HHHHHHHHHCCSCTTCEEEEESCTTCHHHHH
T ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCCCCEEE
T ss_conf             9999999838667998899955589701577


No 89 
>>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A (A:)
Probab=41.50  E-value=23  Score=15.71  Aligned_cols=40  Identities=20%  Similarity=0.120  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHCC-CCCCCCHHHHH
Q ss_conf             99989999999997609998786654303-78543202466
Q gi|254780429|r   37 HAEHLMPAIDYALKDSRLEVSQVDRVVTA-LGPGSFTGVRV   76 (206)
Q Consensus        37 hs~~L~~~i~~lL~~~~~~~~~id~iav~-~GPGSFTGlRi   76 (206)
                      .++.-..+.+++|++++++++|||.|.++ ..|-.+.+.-.
T Consensus        98 ~~~la~~Aa~~aL~~a~~~~~dId~li~~t~t~~~~~~~~a  138 (387)
T 3a5r_A           98 VAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADY  138 (387)
T ss_dssp             HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHH
T ss_conf             99999999999999839998898499997778998887899


No 90 
>>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} (A:1-180)
Probab=40.19  E-value=20  Score=16.11  Aligned_cols=80  Identities=11%  Similarity=0.054  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHCCCCCCCCCH-----HHH--HHHHHHC
Q ss_conf             8999899999999976099987866543037854320-2466899999999732687110383-----899--9987521
Q gi|254780429|r   36 GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFT-GVRVSIAVARGISLVLKQPALGVGN-----LEV--LARAHLD  107 (206)
Q Consensus        36 ~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFT-GlRigia~akgLa~~~~~pv~gvss-----le~--la~~~~~  107 (206)
                      .-.+.....+.++|+++|+++++||.++++.--+-++ +.-...  ++......+++.+.|+.     +.+  +|.+...
T Consensus        60 ~~~~la~~A~~~aL~~~gi~~~~Id~vi~~~~~~~~~~~~~a~~--v~~~~g~~~~~~~~v~~~C~sg~~al~~A~~~i~  137 (180)
T 1u6e_A           60 SAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPM--VAASLGAKGILGFDLSAGAAGFGYALGAAADMIR  137 (180)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHH--HHHHHTCTTSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHH--HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
T ss_conf             99999999999999744567411436899653466568627765--4432046632111210221231777888754100


Q ss_pred             CCCCCEEEEE
Q ss_conf             4678659998
Q gi|254780429|r  108 SHVGRPIMVL  117 (206)
Q Consensus       108 ~~~~~~i~~~  117 (206)
                      ......++++
T Consensus       138 ~g~~~~~Lvv  147 (180)
T 1u6e_A          138 GGGAATMLVV  147 (180)
T ss_dssp             HTSCSSEEEE
T ss_pred             CCCCCCEEEE
T ss_conf             3564224886


No 91 
>>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} (A:)
Probab=40.05  E-value=14  Score=17.05  Aligned_cols=61  Identities=13%  Similarity=0.077  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCH---HHHHHHHCCCCCC-----------------------CCHHHHHHHHHHHHHHHHCCC
Q ss_conf             99989999999997609998---7866543037854-----------------------320246689999999973268
Q gi|254780429|r   37 HAEHLMPAIDYALKDSRLEV---SQVDRVVTALGPG-----------------------SFTGVRVSIAVARGISLVLKQ   90 (206)
Q Consensus        37 hs~~L~~~i~~lL~~~~~~~---~~id~iav~~GPG-----------------------SFTGlRigia~akgLa~~~~~   90 (206)
                      +.......+.+.|++.|...   .+.+.......++                       -+++.+.|+.+=-|+|+++++
T Consensus        25 ~~~~~~~~i~~~l~~~g~~~~~p~~~~~~~~~~~~~~~~~~~i~~~d~~~i~~aD~vIa~l~~~d~Gt~~ElG~A~a~gK  104 (165)
T 2khz_A           25 EDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVALGK  104 (165)
T ss_dssp             HHHHHHHHHHHHHHHHSEESGGGTTTTSSSCCSTTSTTCHHHHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCC
T ss_conf             68999999999999829631001576003230333457789999999998851999999778998447999999998798


Q ss_pred             CCCCCCH
Q ss_conf             7110383
Q gi|254780429|r   91 PALGVGN   97 (206)
Q Consensus        91 pv~gvss   97 (206)
                      |++.+..
T Consensus       105 Pvi~l~~  111 (165)
T 2khz_A          105 PILCLFR  111 (165)
T ss_dssp             SEEEEEC
T ss_pred             EEEEEEC
T ss_conf             2999964


No 92 
>>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type III, transferase; 1.90A {Marchantia polymorpha} (A:31-413)
Probab=38.63  E-value=24  Score=15.60  Aligned_cols=37  Identities=19%  Similarity=0.133  Sum_probs=26.9

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCCCHHH
Q ss_conf             99899999999976099987866543037-85432024
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGSFTGV   74 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGSFTGl   74 (206)
                      .+.-.....++|+++++++++||.|.++. .|....+.
T Consensus        91 ~~ma~~Aa~~aL~~ag~~~~~Id~ii~~t~t~~~~~~~  128 (383)
T 2p0u_A           91 PKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGA  128 (383)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCH
T ss_conf             99999999999998599989998799995089877761


No 93 
>>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} (A:1-154,A:358-373)
Probab=38.55  E-value=7.5  Score=18.89  Aligned_cols=63  Identities=6%  Similarity=-0.044  Sum_probs=32.0

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECCH---HHHHHHHHHHHHHHHHHC-CCHHHHHHHHCCC
Q ss_conf             788621680127899977981399999984226---899989999999997609-9987866543037
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLGR---GHAEHLMPAIDYALKDSR-LEVSQVDRVVTAL   66 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r---~hs~~L~~~i~~lL~~~~-~~~~~id~iav~~   66 (206)
                      +++||-....+.+++++.+ ++++.+.....+.   .....+...+++++++.. ....++..++++.
T Consensus        31 ~igiDIG~t~i~~~l~d~~-g~il~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~i~~igi~~   97 (170)
T 2q2r_A           31 TFVGDVGGTSARMGFVREG-KNDSVHACVTRYSMKRKDITEIIEFFNEIIELMPASVMKRVKAGVINV   97 (170)
T ss_dssp             EEEEEECSSEEEEEEEEEC-GGGCEEEEEEEEECTTCBGGGHHHHHHHHHHHSCHHHHTTEEEEEEEE
T ss_pred             EEEEEECCHHHHHEEEECC-CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             8999988053101789889-982778898522678899889999999999999873488878799994


No 94 
>>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} (A:1-136,A:711-717)
Probab=38.02  E-value=11  Score=17.85  Aligned_cols=61  Identities=8%  Similarity=-0.050  Sum_probs=40.5

Q ss_pred             CCEEEEECCCHH--HEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
Q ss_conf             927886216801--27899977981399999984226899989999999997609998786654303785
Q gi|254780429|r    1 MIVLALDTTGAD--CSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP   68 (206)
Q Consensus         1 M~iLaIdTs~~~--~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP   68 (206)
                      |+|-.|-|++..  .+.-++..++..++.........       ..+.+.+++.++++++||.|.++-+=
T Consensus         1 mki~~lg~~~~~g~~n~~li~~~~~~iLiD~G~~~~~-------~~~~~~l~~~~~~~~~i~~IilTH~H   63 (143)
T 2i7x_A            1 MTYKYNCCDDGSGTTVGSVVRFDNVTLLIDPGWNPSK-------VSYEQCIKYWEKVIPEIDVIILSQPT   63 (143)
T ss_dssp             CCEEEEECCSSSSSCCCEEEEETTEEEEECCCCCTTT-------SCHHHHHHHHHTTGGGCCEEECCCSS
T ss_pred             CEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCC-------CCHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf             9589998248998455799998996999979998776-------66434012231166668889976897


No 95 
>>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysis, enzyme stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} (A:)
Probab=36.52  E-value=28  Score=15.21  Aligned_cols=58  Identities=16%  Similarity=0.135  Sum_probs=37.2

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH
Q ss_conf             927886216801278999779813999999842268999899999999976099987866543037854320
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFT   72 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFT   72 (206)
                      |.++-=+.+.+...++++...         |  .+.-.+.|+.-..+.|++.|+...+++.+-|   ||+|-
T Consensus         1 M~~~~~~~~~~~~riaIV~s~---------f--n~~i~~~ll~ga~~~L~~~gv~~~~i~~~~V---PGa~E   58 (154)
T 1hqk_A            1 MQIYEGKLTAEGLRFGIVASR---------F--NHALVDRLVEGAIDCIVRHGGREEDITLVRV---PGSWE   58 (154)
T ss_dssp             CEEECCCSCCTTCCEEEEEEC---------T--THHHHHHHHHHHHHHHHHTTCCGGGEEEEEE---SSGGG
T ss_pred             CCEEECCCCCCCCEEEEEECC---------C--CHHHHHHHHHHHHHHHHHCCCCHHCEEEEEC---CCHHH
T ss_conf             946856427889889999810---------7--5999999999999999985998201589989---97889


No 96 
>>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} (A:)
Probab=35.70  E-value=9.3  Score=18.27  Aligned_cols=31  Identities=16%  Similarity=0.230  Sum_probs=22.3

Q ss_pred             HHHHHHHHHCCCHHHHHHHHCCCCCCCCHHH
Q ss_conf             9999997609998786654303785432024
Q gi|254780429|r   44 AIDYALKDSRLEVSQVDRVVTALGPGSFTGV   74 (206)
Q Consensus        44 ~i~~lL~~~~~~~~~id~iav~~GPGSFTGl   74 (206)
                      -+.+++.+.++-...-..+=++.|||+||-.
T Consensus         9 KL~e~~~~~~~~~pg~~VLDlg~gpGg~t~~   39 (180)
T 1ej0_A            9 KLDEIQQSDKLFKPGMTVVDLGAAPGGWSQY   39 (180)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEESCTTCHHHHH
T ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCCCHHHH
T ss_conf             9999999728467998899955558827999


No 97 
>>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A (A:1-170)
Probab=35.49  E-value=29  Score=15.11  Aligned_cols=68  Identities=12%  Similarity=0.071  Sum_probs=41.1

Q ss_pred             EEEEECCHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             9998422689-99899999999976099987866543037854320246689999999973268711038
Q gi|254780429|r   28 SYFKNLGRGH-AEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVG   96 (206)
Q Consensus        28 ~~~~~~~r~h-s~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvs   96 (206)
                      ++....+..+ .+.-...++++|+++++++++||.+.++.=-+-.+.--.+..+++.+.. .+++...++
T Consensus        41 ~r~~~~~~e~~~~la~~A~~~~L~~~~~~~~~Id~li~~s~~~~~~~~~~a~~v~~~lg~-~~~~~~~v~  109 (170)
T 1zow_A           41 ERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGT-GKVASMDQL  109 (170)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTC-CSCCEEEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCC-CCCCCCEEC
T ss_conf             899848998999999999997776541262102189872343000222122333112233-434331121


No 98 
>>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis H37RV} (A:)
Probab=35.27  E-value=29  Score=15.09  Aligned_cols=36  Identities=14%  Similarity=0.016  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCCC-CCCCCHH
Q ss_conf             99899999999976099987866543037-8543202
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTAL-GPGSFTG   73 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~~-GPGSFTG   73 (206)
                      ++.-....+++|++++++++|||.+.++. -|....+
T Consensus       114 ~~la~~Aa~~aL~~ag~~~~dId~li~~t~~~~~~~~  150 (393)
T 1ted_A          114 VPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPG  150 (393)
T ss_dssp             HHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSC
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCH
T ss_conf             9999999999998759998899899998878998875


No 99 
>>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus HB8} (A:1-168)
Probab=34.77  E-value=17  Score=16.66  Aligned_cols=88  Identities=15%  Similarity=0.115  Sum_probs=48.3

Q ss_pred             EEEEEECCH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH-----H
Q ss_conf             999984226-89998999999999760999878665430378-5432024668999999997326871103838-----9
Q gi|254780429|r   27 GSYFKNLGR-GHAEHLMPAIDYALKDSRLEVSQVDRVVTALG-PGSFTGVRVSIAVARGISLVLKQPALGVGNL-----E   99 (206)
Q Consensus        27 ~~~~~~~~r-~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G-PGSFTGlRigia~akgLa~~~~~pv~gvssl-----e   99 (206)
                      ..++...+. .-.+.-...++++|+++++++++||.+.++.- |..+..-+..+ ....  ...+++.+-++.-     .
T Consensus        39 ~~r~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~li~~t~~~~~~~~~~~~~-~~~~--l~~~~~~~~~~~~C~g~~~  115 (168)
T 1ub7_A           39 KERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAAL-VQAR--FGLKAFAYDLLAGXPGWIY  115 (168)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHH-HHHH--TTCCCEEEEEECSTTHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHCCHHHH-HHHH--HCCCCCCEEHHCCCCHHHH
T ss_conf             589988999999999999999999866998655646998537752010307789-9988--5366530212103313678


Q ss_pred             H--HHHHHHCCCCCCEEEEE
Q ss_conf             9--99875214678659998
Q gi|254780429|r  100 V--LARAHLDSHVGRPIMVL  117 (206)
Q Consensus       100 ~--la~~~~~~~~~~~i~~~  117 (206)
                      +  +|...........++++
T Consensus       116 al~~A~~~l~~g~~~~aLvv  135 (168)
T 1ub7_A          116 ALAQAHALVEAGLAQKVLAV  135 (168)
T ss_dssp             HHHHHHHHHHTTSCSEEEEE
T ss_pred             HHHHHHHHHHCCCCCEEEEE
T ss_conf             88876537652995325786


No 100
>>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} (A:)
Probab=33.93  E-value=24  Score=15.61  Aligned_cols=29  Identities=21%  Similarity=0.263  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCCC
Q ss_conf             99899999999976099987866543037
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTAL   66 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~~   66 (206)
                      ...-...++++|+++++++++||.+.++.
T Consensus       111 ~~la~~Aa~~lL~~~g~~~~~Id~li~~t  139 (465)
T 3e1h_A          111 VPLAVEASRKAMAEARLVPAQITHMVSTT  139 (465)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf             99999999999997599989989899973


No 101
>>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} (A:)
Probab=33.22  E-value=31  Score=14.87  Aligned_cols=34  Identities=15%  Similarity=0.024  Sum_probs=26.1

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
Q ss_conf             9989999999997609998786654303785432
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF   71 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF   71 (206)
                      ...-....+++|+++|++++|||.|+++.--+-+
T Consensus       108 ~~la~~Aar~aL~~ag~~~~dId~ii~~t~t~~~  141 (402)
T 1ee0_A          108 PMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVD  141 (402)
T ss_dssp             HHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCE
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCC
T ss_conf             9999999999998759998999999998889999


No 102
>>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus HB8} (A:1-151)
Probab=33.09  E-value=31  Score=14.86  Aligned_cols=55  Identities=9%  Similarity=0.009  Sum_probs=36.0

Q ss_pred             CCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
Q ss_conf             680127899977981399999984226899989999999997609998786654303785
Q gi|254780429|r    9 TGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP   68 (206)
Q Consensus         9 s~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP   68 (206)
                      +....+..++.++++.++.......     +.-.+.+.+.+++.++++++|+.|.++=.=
T Consensus        18 ~~~~~n~~li~~~~~~iLiD~G~~~-----~~~~~~~~~~l~~~~~~~~~i~~viiTH~H   72 (151)
T 2zo4_A           18 PLKTVNLYLLQGAGEVALVDTALGT-----RAARGALELHLAELGLCFQDVKTILLTHHH   72 (151)
T ss_dssp             TTCEEEEEEEEETTEEEEECCCCSS-----HHHHHHHHHHHHHTTCCGGGCCEEEESCCS
T ss_pred             CCCCEEEEEEEECCEEEEEECCCCC-----HHHHHHHHHHHHHCCCCCCCEEEEEECCCC
T ss_conf             9886799999989989999899997-----789999999999759997670599955778


No 103
>>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} (A:)
Probab=32.81  E-value=24  Score=15.60  Aligned_cols=45  Identities=7%  Similarity=-0.119  Sum_probs=30.9

Q ss_pred             EEEEEECCH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
Q ss_conf             999984226-899989999999997609998786654303785432
Q gi|254780429|r   27 GSYFKNLGR-GHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF   71 (206)
Q Consensus        27 ~~~~~~~~r-~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF   71 (206)
                      .+++...+. .-...-..+++++|+++++++++||.+.++.--+-+
T Consensus        43 ~~r~v~~~~E~~~~ma~~Aa~~aL~~agi~p~~Id~Li~~t~s~~~   88 (460)
T 2v4w_A           43 TRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIID   88 (460)
T ss_dssp             CEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSC
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCC
T ss_conf             7899689999999999999999999859998999999999279887


No 104
>>1o1y_A Conserved hypothetical protein TM1158; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.70A {Thermotoga maritima} (A:)
Probab=32.41  E-value=32  Score=14.79  Aligned_cols=51  Identities=18%  Similarity=0.010  Sum_probs=34.3

Q ss_pred             CHHHHHHHHCCCCCCCCHHHH-----HHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH
Q ss_conf             987866543037854320246-----6899999999732687110383-89999875
Q gi|254780429|r   55 EVSQVDRVVTALGPGSFTGVR-----VSIAVARGISLVLKQPALGVGN-LEVLARAH  105 (206)
Q Consensus        55 ~~~~id~iav~~GPGSFTGlR-----igia~akgLa~~~~~pv~gvss-le~la~~~  105 (206)
                      +..+.|.|.++=||++-+.-.     .++-..--.+...++|++||+- +++|+...
T Consensus        54 ~~~~~Dgiii~Gg~~~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlLa~~~  110 (239)
T 1o1y_A           54 PLEEYSLVVLLGGYXGAYEEEKYPFLKYEFQLIEEILKKEIPFLGIXLGSQXLAKVL  110 (239)
T ss_dssp             CGGGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHT
T ss_pred             CHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH
T ss_conf             744479899889999877776783229999999999976999999828999999870


No 105
>>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A* (A:)
Probab=32.17  E-value=32  Score=14.76  Aligned_cols=35  Identities=20%  Similarity=0.205  Sum_probs=29.0

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH
Q ss_conf             99899999999976099987866543037854320
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFT   72 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFT   72 (206)
                      .+.-...+.++|+++++++.+||.+.++.-.+.++
T Consensus        82 ~~la~~Aa~~aL~~ag~~~~~id~li~~t~~~~~~  116 (379)
T 3euo_A           82 VPLAVEASRKAMAEARLVPAQITHMVSTTCTDSAN  116 (379)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCS
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCC
T ss_conf             99999999999997699967834899940215678


No 106
>>1qyr_A KSGA, high level kasugamycin resistance protein, S-; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} (A:)
Probab=31.56  E-value=19  Score=16.27  Aligned_cols=55  Identities=13%  Similarity=-0.084  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             999999976099987866543037854320246689999999973268711038389999875214
Q gi|254780429|r   43 PAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGNLEVLARAHLDS  108 (206)
Q Consensus        43 ~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvssle~la~~~~~~  108 (206)
                      .+++.+++..+++.. -.-+=+|+|||++|--         | ...+..+++|..-+.+...+...
T Consensus         8 ~~~~~i~~~l~l~~g-~~VLDIGcG~G~lt~~---------l-A~~~~~Vt~id~s~~~~~~a~~~   62 (252)
T 1qyr_A            8 FVIDSIVSAINPQKG-QAMVEIGPGLAALTEP---------V-GERLDQLTVIELDRDLAARLQTH   62 (252)
T ss_dssp             HHHHHHHHHHCCCTT-CCEEEECCTTTTTHHH---------H-HTTCSCEEEECCCHHHHHHHHTC
T ss_pred             HHHHHHHHHCCCCCC-CEEEEECCCCHHHHHH---------H-HCCCCCEEEEEECCCHHHHHHHH
T ss_conf             999999984389997-9699979986099999---------9-72689659999772267999886


No 107
>>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A (A:37-413)
Probab=31.31  E-value=30  Score=14.99  Aligned_cols=40  Identities=10%  Similarity=0.114  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCC-CCCCCCHHHHHH
Q ss_conf             9989999999997609998786654303-785432024668
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTA-LGPGSFTGVRVS   77 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~-~GPGSFTGlRig   77 (206)
                      .+.-....+++|+++++++++||.|.++ ..|..+.+.-..
T Consensus        90 ~~la~~Aa~~aL~~~~~~~~~Id~li~~t~~~~~~~~~~a~  130 (377)
T 1xes_A           90 PRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFE  130 (377)
T ss_dssp             HHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHH
T ss_conf             99999999999998298988999999994489866663599


No 108
>>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* (A:1-197)
Probab=31.17  E-value=34  Score=14.66  Aligned_cols=80  Identities=15%  Similarity=0.203  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHH--HHHHHHCCC
Q ss_conf             9998999999999760999878665430378543202466899999999732687110383-----899--998752146
Q gi|254780429|r   37 HAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGN-----LEV--LARAHLDSH  109 (206)
Q Consensus        37 hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvss-----le~--la~~~~~~~  109 (206)
                      -.+.....++++|+++++++++||.++++.-=+-..+=-.+.-+.+ .....+++.+.++.     +.+  +|.......
T Consensus        74 ~~~la~~A~~~aL~~~~~~~~~Id~vi~~s~~~~~~~~~~a~~i~~-~lg~~~~~~~~v~~~Cas~~~al~~A~~~i~~g  152 (197)
T 3h78_A           74 VSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQP-LLGLRHIPVLDIRAQASGLLYGLQMARGQILAG  152 (197)
T ss_dssp             THHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHH-HHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCCCHHHHHHHH-HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             9999999999999883999788205898522456654123789887-336898642120124442276665531133248


Q ss_pred             CCCEEEEE
Q ss_conf             78659998
Q gi|254780429|r  110 VGRPIMVL  117 (206)
Q Consensus       110 ~~~~i~~~  117 (206)
                      ....++++
T Consensus       153 ~~~~vLvv  160 (197)
T 3h78_A          153 LARHVLVV  160 (197)
T ss_dssp             SCSEEEEE
T ss_pred             CCCCCCCC
T ss_conf             84322223


No 109
>>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, SGC, transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} (A:1-107,A:275-287)
Probab=29.63  E-value=36  Score=14.49  Aligned_cols=56  Identities=9%  Similarity=0.049  Sum_probs=34.3

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
Q ss_conf             92788621680127899977981399999984226899989999999997609998786654303785432
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF   71 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF   71 (206)
                      |+.++||--+..+-+++++++  ++.+....+..       +..+.++|++.+++     . .|..|=|.+
T Consensus        20 m~~lGIDiGsT~tK~V~~e~~--~l~f~~f~t~~-------i~~vl~~Lk~~~i~-----~-i~aTGyGa~   75 (120)
T 2ews_A           20 HMKVGIDAGGTLIKIVQEQDN--QRTFKTELTKN-------IDQVVEWLNQQQIE-----K-LCLTGGNAG   75 (120)
T ss_dssp             -CEEEEEECSSEEEEEEECSS--CEEEEEEEGGG-------HHHHHHHHHTSCCS-----E-EEEESTTHH
T ss_pred             CEEEEEEECHHHEEEEEEECC--CCEEEEEEHHH-------HHHHHHHHHHHCCC-----E-EEEECCCHH
T ss_conf             779999987113999999399--98999860666-------99999999862588-----8-999704801


No 110
>>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A* (A:28-406)
Probab=29.16  E-value=30  Score=14.96  Aligned_cols=34  Identities=12%  Similarity=-0.055  Sum_probs=26.1

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCC-CCCCCC
Q ss_conf             9989999999997609998786654303-785432
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTA-LGPGSF   71 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~-~GPGSF   71 (206)
                      ...-....+++|+++++++++||.|.++ .-|-.+
T Consensus        89 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~  123 (379)
T 2d3m_A           89 PALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDM  123 (379)
T ss_dssp             HHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEE
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCC
T ss_conf             99999999999998399989998789993489878


No 111
>>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} (A:)
Probab=28.16  E-value=38  Score=14.33  Aligned_cols=40  Identities=18%  Similarity=0.035  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC-CCCCHHH
Q ss_conf             689998999999999760999878665430378-5432024
Q gi|254780429|r   35 RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG-PGSFTGV   74 (206)
Q Consensus        35 r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G-PGSFTGl   74 (206)
                      ..-.+.....++++|++++++++|||.+.++.. |..+.+.
T Consensus        58 e~~~~la~~Aa~~aL~~ag~~p~~Id~li~~s~~~~~~~~~   98 (339)
T 1mzj_A           58 ETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPP   98 (339)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSC
T ss_pred             CCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCC
T ss_conf             89999999999999987598957630135301368778952


No 112
>>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} (A:188-229,A:314-341)
Probab=27.33  E-value=39  Score=14.23  Aligned_cols=63  Identities=29%  Similarity=0.377  Sum_probs=41.8

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf             9278862168012789997798139999998422689998999999999760999878665430378
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG   67 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G   67 (206)
                      +++|.+|--.-++-++++.-+++..  +.....+-.|  .=+.-+++.|+.++++.++|+.|+..=|
T Consensus         6 ~~ilVfDlGGGTfDVSil~~~~g~~--~V~at~GD~~--LG~~~~~~~l~da~~~~~~i~~vvlvgg   68 (70)
T 1yuw_A            6 RNVLIFDLGGGTFDVSILTIAAGIF--EVKSTAGDTH--LGLDPVEKALRDAKLDKSQIHDIVLVGG   68 (70)
T ss_dssp             EEEEEEEECSSCEEEEEEEEETTEE--EEEEEEEETT--CSTHHHHHHHHHTTCCGGGCCEEEEESG
T ss_pred             CEEEEEECCCCEEEEEEEEEECCEE--EEEEECCCCC--CCHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             2799998489579999999709889--9999528877--5899999999982999888978999898


No 113
>>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} (A:)
Probab=24.67  E-value=36  Score=14.49  Aligned_cols=63  Identities=17%  Similarity=0.167  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHCCC---------HHHHHHHHCCCCCCCCHHH---HHHHHHHHHHHHHCCCCCCCCCH-HHHHHHH
Q ss_conf             99999999760999---------8786654303785432024---66899999999732687110383-8999987
Q gi|254780429|r   42 MPAIDYALKDSRLE---------VSQVDRVVTALGPGSFTGV---RVSIAVARGISLVLKQPALGVGN-LEVLARA  104 (206)
Q Consensus        42 ~~~i~~lL~~~~~~---------~~~id~iav~~GPGSFTGl---Rigia~akgLa~~~~~pv~gvss-le~la~~  104 (206)
                      ...+.++|++.|..         +++.|+|.++=||++..--   ..+..-.---....++|++|++- ++.|+..
T Consensus        35 ~~~~~~~l~~~G~~~~~~~~~~~l~~~Dgvil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PvlGiC~G~Q~L~~~  110 (219)
T 1q7r_A           35 VREHVRAIEACGAEAVIVKKSEQLEGLDGLVLPGGESTTXRRLIDRYGLXEPLKQFAAAGKPXFGTCAGLILLAKR  110 (219)
T ss_dssp             CHHHHHHHHHTTCEEEEECSGGGGTTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEE
T ss_pred             HHHHHHHHHHCCCCEEEECCHHHHHCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHC
T ss_conf             9999999998799699989989982699999899987999988545770999998754699789981305765220


No 114
>>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} (A:)
Probab=24.63  E-value=44  Score=13.92  Aligned_cols=58  Identities=17%  Similarity=0.268  Sum_probs=36.3

Q ss_pred             CCEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH
Q ss_conf             927886216801278999779813999999842268999899999999976099987866543037854320
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFT   72 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFT   72 (206)
                      |.++-=+.+.+...++++...         |  .+...+.|+.-..+.|++.|....+|+.+-|   ||+|-
T Consensus         1 m~~~~~~~~~~~~ri~IV~s~---------f--n~~i~~~l~~ga~~~l~~~g~~~~~i~v~~V---PGa~E   58 (154)
T 1rvv_A            1 MNIIQGNLVGTGLKIGIVVGR---------F--NDFITSKLLSGAEDALLRHGVDTNDIDVAWV---PGAFE   58 (154)
T ss_dssp             CEEECCCSCCTTCCEEEEEES---------T--THHHHHHHHHHHHHHHHHTTCCGGGEEEEEE---SSGGG
T ss_pred             CCEEECCCCCCCCEEEEEEEE---------C--CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE---CCEEC
T ss_conf             966735557899889999813---------7--6999999999999999985998657679998---85421


No 115
>>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} (A:)
Probab=23.51  E-value=20  Score=16.06  Aligned_cols=31  Identities=10%  Similarity=0.141  Sum_probs=24.1

Q ss_pred             HHHHHHHHHCCCHHHHHHHHCCCCCCCCHHH
Q ss_conf             9999997609998786654303785432024
Q gi|254780429|r   44 AIDYALKDSRLEVSQVDRVVTALGPGSFTGV   74 (206)
Q Consensus        44 ~i~~lL~~~~~~~~~id~iav~~GPGSFTGl   74 (206)
                      -+.|++++-++....-..+=++.+||+||-.
T Consensus         9 KL~ei~~~f~l~~~~~~vlDLcaAPGg~t~~   39 (196)
T 2nyu_A            9 KLLEVNERHQILRPGLRVLDCGAAPGAWSQV   39 (196)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEETCCSCHHHHH
T ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCCHHHHH
T ss_conf             9999999718566998799964789658999


No 116
>>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} (A:210-336)
Probab=23.37  E-value=46  Score=13.76  Aligned_cols=55  Identities=13%  Similarity=0.048  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             9989999999997609998786654303785432024668999999997326871103838999987
Q gi|254780429|r   38 AEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGNLEVLARA  104 (206)
Q Consensus        38 s~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvssle~la~~  104 (206)
                      .+.+...|++.|++.++++.+|+.++-. =||           ...++..+++|+..++.=++-+..
T Consensus        13 ~e~i~~ai~~~l~~~~l~~~ai~~iasi-E~g-----------l~~~a~~l~~pl~~~~~e~L~~v~   67 (127)
T 3eeq_A           13 MEEIRDGIYKVLERLNLKRERIGIIASI-REE-----------VKKIADEFNVRFRLVNEEEINNFM   67 (127)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEEEEES-CTT-----------HHHHHHHHTCEEEECCHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHEEEEC-CHH-----------HHHHHHHCCCCEEECCHHHHHHCC
T ss_conf             7899999999999869997880246842-276-----------899999809977976899996354


No 117
>>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; 2.10A {Thermoanaerobacter tengcongensis MB4} (A:)
Probab=22.99  E-value=47  Score=13.72  Aligned_cols=58  Identities=14%  Similarity=0.100  Sum_probs=37.0

Q ss_pred             CCEEEEECCCH--------HHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
Q ss_conf             92788621680--------127899977981399999984226899989999999997609998786654303785
Q gi|254780429|r    1 MIVLALDTTGA--------DCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGP   68 (206)
Q Consensus         1 M~iLaIdTs~~--------~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GP   68 (206)
                      |.|-.+.|...        .++.-++..++..++.    ..+..      +.+.+.+.+.++++++||+|.++=.=
T Consensus        13 m~i~~lg~g~~~~~~~~~~~~~~~li~~~~~~iLi----D~G~~------~~~~~~l~~~~~~~~~id~iiiTH~H   78 (284)
T 2p4z_A           13 VEVQVLIENVVFARNFVAEHGLSLLLKKGNKEIVV----DTGQS------ENFIKNCGLMGIDVGRIKKVVLTHGH   78 (284)
T ss_dssp             CEEEEEECSBCCSTTCCBCSSCEEEEEETTEEEEE----CCCSS------THHHHHHHHTTCCGGGCCEEECCCSC
T ss_pred             EEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEEE----ECCCC------HHHHHHHHHCCCCHHHCCEEEEECCC
T ss_conf             69999982886667866475689999989969999----58999------79999999849986787689990457


No 118
>>3l83_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2, protein structure initiative; 1.50A {Methylobacillus flagellatus} (A:)
Probab=22.94  E-value=41  Score=14.09  Aligned_cols=50  Identities=20%  Similarity=0.214  Sum_probs=34.4

Q ss_pred             CHHHHHHHHCCCCCCCCHHH----HHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH
Q ss_conf             98786654303785432024----66899999999732687110383-89999875
Q gi|254780429|r   55 EVSQVDRVVTALGPGSFTGV----RVSIAVARGISLVLKQPALGVGN-LEVLARAH  105 (206)
Q Consensus        55 ~~~~id~iav~~GPGSFTGl----Rigia~akgLa~~~~~pv~gvss-le~la~~~  105 (206)
                      +..+.|+++++=||++-+--    ..-.... -.+...++|++||+. +++|+...
T Consensus        45 ~~~~~DgiIi~GGp~~~~~~~~~~~~~~~li-~~~~~~~~PvLGIC~G~Qlla~al   99 (250)
T 3l83_A           45 EIRDCSGLAMMGGPMSANDDLPWMPTLLALI-RDAVAQRVPVIGHCLGGQLLAKAM   99 (250)
T ss_dssp             CGGGSSEEEECCCSSCTTSCCTTHHHHHHHH-HHHHHTTCCEEEETHHHHHHHHHT
T ss_pred             CHHHCCEEEEECCCCCCCCCCHHHHHHHHHH-HHHHHCCCCEEEEEHHHHHHHEEC
T ss_conf             8645999999099997778786689999999-999986998899864431464435


No 119
>>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum 3D7} (A:)
Probab=22.38  E-value=22  Score=15.91  Aligned_cols=29  Identities=10%  Similarity=-0.106  Sum_probs=21.2

Q ss_pred             HHHHHHHHCCCHHHHHHHHCCCCCCCCHH
Q ss_conf             99999760999878665430378543202
Q gi|254780429|r   45 IDYALKDSRLEVSQVDRVVTALGPGSFTG   73 (206)
Q Consensus        45 i~~lL~~~~~~~~~id~iav~~GPGSFTG   73 (206)
                      +.++++..++....-..+=.+.|||+||-
T Consensus        10 L~ei~~~~~~~~~g~~vlDlcaaPGg~s~   38 (201)
T 2plw_A           10 LIELDNKYLFLKKNKIILDIGCYPGSWCQ   38 (201)
T ss_dssp             HHHHHHHHCCCCTTEEEEEESCTTCHHHH
T ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCHHHH
T ss_conf             99999984803699879995578967999


No 120
>>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} (A:281-550)
Probab=22.33  E-value=48  Score=13.63  Aligned_cols=47  Identities=19%  Similarity=0.112  Sum_probs=34.6

Q ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHH
Q ss_conf             87866543037854320246689999999973268711038-38999987
Q gi|254780429|r   56 VSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVG-NLEVLARA  104 (206)
Q Consensus        56 ~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvs-sle~la~~  104 (206)
                      +.+.|.++++-|||+..-...-..+.+  ++..++|+.||+ -+++|+..
T Consensus        73 l~~~dgivl~ggp~~~~~~~~~~~i~~--~~~~~~PiLGIClG~Q~l~~~  120 (270)
T 1vco_A           73 FRDVSGILVPGGFGVRGIEGKVRAAQY--ARERKIPYLGICLGLQIAVIE  120 (270)
T ss_dssp             TTTCSCEEECCCCSSTTHHHHHHHHHH--HHHTTCCEEEETHHHHHHHHH
T ss_pred             HHCCCEEEECCCCCCCCCHHHHHHHHH--HHHCCCHHHHHHHHHHHHHHH
T ss_conf             633781783266776760689999998--987471288887678999999


No 121
>>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide- binding, phosphoprotein, polymorphism; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3fzh_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 1ngh_A* 1ngd_A* 1ngf_A* 1bup_A* 1nga_A* ... (A:1-208,A:383-404)
Probab=21.93  E-value=49  Score=13.58  Aligned_cols=22  Identities=14%  Similarity=0.276  Sum_probs=19.5

Q ss_pred             CCEEEEECCCHHHEEEEEECCC
Q ss_conf             9278862168012789997798
Q gi|254780429|r    1 MIVLALDTTGADCSVAIYDSHA   22 (206)
Q Consensus         1 M~iLaIdTs~~~~sval~~~~~   22 (206)
                      |.+++||--|.+++||+++++.
T Consensus        23 ~~viGIDfGTTns~VA~~~~g~   44 (230)
T 3i33_A           23 MPAIGIDLGTTYSCVGVFQHGK   44 (230)
T ss_dssp             CCCEEEEECSSEEEEEEEETTE
T ss_pred             CCEEEEECCCCCEEEEEEECCE
T ss_conf             9899999371478999998998


No 122
>>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} (A:)
Probab=21.90  E-value=48  Score=13.65  Aligned_cols=60  Identities=17%  Similarity=0.219  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             9998999999999760999878665430378543202466899999999732687110383899998
Q gi|254780429|r   37 HAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLKQPALGVGNLEVLAR  103 (206)
Q Consensus        37 hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~~pv~gvssle~la~  103 (206)
                      ..+.|...|.+.|.++++.+.+|++|+...--=       .-.....++..+++|+.-++.=++...
T Consensus        23 ~~~~i~~~i~~aL~~~~l~~~~i~~iati~~K~-------~E~~L~~~A~~l~~pl~~~~~~eL~~~   82 (145)
T 2w6k_A           23 SAEHLRALLERTLGEHGRSLAELDALASIDGKR-------DEPGLRQLATLLERPVHFLAPAVLHDY   82 (145)
T ss_dssp             CHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSS-------CCHHHHHHHHHHTSCEEEECHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCC-------CCHHHHHHHHHHCCCEEEECHHHHHHH
T ss_conf             999999999999998499978852457033137-------989999999991998598589999865


No 123
>>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} (A:)
Probab=21.39  E-value=49  Score=13.58  Aligned_cols=22  Identities=18%  Similarity=0.147  Sum_probs=14.8

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCH
Q ss_conf             6899999999732687110383
Q gi|254780429|r   76 VSIAVARGISLVLKQPALGVGN   97 (206)
Q Consensus        76 igia~akgLa~~~~~pv~gvss   97 (206)
                      .|.++=-|+|+++|+|++++.+
T Consensus        96 ~Gt~~ElG~A~a~gkpv~~~~~  117 (167)
T 1s2d_A           96 DGSAFXIGFMRAMHKPVILVPF  117 (167)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCHHHHHHHHHHCCCCEEEEEC
T ss_conf             3189999999986994899966


No 124
>>2j01_S 50S ribosomal protein L18; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} (S:)
Probab=21.17  E-value=46  Score=13.78  Aligned_cols=70  Identities=20%  Similarity=0.205  Sum_probs=41.6

Q ss_pred             EEEEECCCHHHEEEEEECCCCEEEEEEEEECC--HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHH
Q ss_conf             78862168012789997798139999998422--689998999999999760999878665430378543202
Q gi|254780429|r    3 VLALDTTGADCSVAIYDSHAGRILGSYFKNLG--RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTG   73 (206)
Q Consensus         3 iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~--r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTG   73 (206)
                      -|.+.-|..+.++-+++++.+.+++.-+....  ++....-.-.+.++|.+..+. ..|+.+.+.+|+=-|+|
T Consensus        25 RL~V~~Snk~i~aqvid~~~~~~lasasT~e~~~~~~n~~Aa~~vG~~la~r~~~-~gi~~v~fDrg~~~y~g   96 (112)
T 2j01_S           25 RLSVFRSLKHIYAQIIDDEKGVTLVSASSLALKLKGNKTEVARQVGRALAEKALA-LGIKQVAFDRGPYKYHG   96 (112)
T ss_dssp             EEECCBCSSCBCEEEEETTTTEEEEEECSTTTCCCSCHHHHHHHHHHHHHHHHHH-TSCCCCBCCCSTTCSSS
T ss_pred             EEEEEEECCEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCHH
T ss_conf             6999970781799999879883899861333222465199999999999999998-69988998089972120


No 125
>>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransferase, viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* (A:1-27,A:80-255)
Probab=20.85  E-value=26  Score=15.41  Aligned_cols=15  Identities=13%  Similarity=0.109  Sum_probs=11.0

Q ss_pred             HHHHHCCCCCCCCHH
Q ss_conf             665430378543202
Q gi|254780429|r   59 VDRVVTALGPGSFTG   73 (206)
Q Consensus        59 id~iav~~GPGSFTG   73 (206)
                      -..+=+++|||+||-
T Consensus        31 ~rVLDlGcgpGg~s~   45 (203)
T 3eld_A           31 GRVLDLGCGRGGWSY   45 (203)
T ss_dssp             EEEEEETCTTCHHHH
T ss_pred             CEEEEECCCCCHHHH
T ss_conf             838983778964999


No 126
>>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} (A:1-131,A:286-310)
Probab=20.59  E-value=52  Score=13.40  Aligned_cols=98  Identities=13%  Similarity=0.086  Sum_probs=63.6

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHH----HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC---H--
Q ss_conf             278862168012789997798139999998422689----9989999999997609998786654303785432---0--
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGH----AEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSF---T--   72 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~h----s~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSF---T--   72 (206)
                      .+++||-....+.+++++-+ ++++.+.....+..-    -+.+...+++++++++.+   +..|.++ .||-.   +  
T Consensus         8 ~~iGVdig~t~i~~~l~dl~-G~il~~~~~~~~~~~~~~~l~~i~~~i~~~~~~~~~~---i~gIgia-~pG~vd~~~g~   82 (156)
T 3htv_A            8 VVAGVDXGATHIRFCLRTAE-GETLHCEKKRTAEVIAPGLVSGIGEXIDEQLRRFNAR---CHGLVXG-FPALVSKDKRT   82 (156)
T ss_dssp             EEEEEEECSSEEEEEEEETT-SCEEEEEEEEHHHHHTTCHHHHHHHHHHHHHHHHTEE---EEEEEEE-ESSCBCTTSSC
T ss_pred             EEEEEEECCCEEEEEEECCC-CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC---CCEEEEE-ECCCEECCCCE
T ss_conf             99999977656999999299-9899999970888788999999999999999865998---3179997-16417548971


Q ss_pred             -------HH--HHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             -------24--668999999997326871103838999987
Q gi|254780429|r   73 -------GV--RVSIAVARGISLVLKQPALGVGNLEVLARA  104 (206)
Q Consensus        73 -------Gl--Rigia~akgLa~~~~~pv~gvssle~la~~  104 (206)
                             ..  --++...+-|...+++|++=.+--.+.|..
T Consensus        83 v~~~~~~~~~~w~~~~l~~~L~~~~~~pV~veNDanaaala  123 (156)
T 3htv_A           83 IISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSW  123 (156)
T ss_dssp             BCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHH
T ss_conf             98468887532237667999999879887840525555567


No 127
>>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A* (A:1-93)
Probab=20.49  E-value=30  Score=15.00  Aligned_cols=59  Identities=14%  Similarity=0.174  Sum_probs=39.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-HHCCCCCCCCCH
Q ss_conf             22689998999999999760999--878665430378543202466899999999-732687110383
Q gi|254780429|r   33 LGRGHAEHLMPAIDYALKDSRLE--VSQVDRVVTALGPGSFTGVRVSIAVARGIS-LVLKQPALGVGN   97 (206)
Q Consensus        33 ~~r~hs~~L~~~i~~lL~~~~~~--~~~id~iav~~GPGSFTGlRigia~akgLa-~~~~~pv~gvss   97 (206)
                      .+...++.+...+.+.+.+.++.  .++.|.+.+-=|=|-|.  |    +++-++ ...++|++||++
T Consensus         8 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~D~vi~iGGDGT~L--~----a~~~~~~~~~~~pv~gin~   69 (93)
T 2i2c_A            8 KGDEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGGDGTFL--S----AFHQYEERLDEIAFIGIHT   69 (93)
T ss_dssp             CCSHHHHHHHHHHHHHHTTSSCEECSSSCSEEEEEESHHHHH--H----HHHHTGGGTTTCEEEEEES
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHH--H----HHHHHHHCCCCCEEEEEEC
T ss_conf             989899999999999886659754788998999989729999--9----9998655158974998614


No 128
>>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme structure, ATP-binding, nucleotide-binding; HET: SAM; 1.70A {Yokose virus} (A:71-244)
Probab=20.38  E-value=23  Score=15.73  Aligned_cols=48  Identities=6%  Similarity=-0.047  Sum_probs=31.0

Q ss_pred             HHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC-CCCCCCCHHHHH
Q ss_conf             9999997609998786654303785432024668999999997326-871103838999
Q gi|254780429|r   44 AIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVARGISLVLK-QPALGVGNLEVL  101 (206)
Q Consensus        44 ~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~akgLa~~~~-~pv~gvssle~l  101 (206)
                      .+++++++.+++.. -..+=+++|||+||         +-++...+ ..++||+.-+-+
T Consensus         8 KL~~~~~~~~l~~g-~~VLDlGcG~Gg~~---------~~~a~~~g~~~v~gvd~s~~~   56 (174)
T 3gcz_A            8 KLRWMEERGYVKPT-GIVVDLGCGRGGWS---------YYAASLKNVKKVMAFTLGVQG   56 (174)
T ss_dssp             HHHHHHHTTSCCCC-EEEEEETCTTCHHH---------HHHHTSTTEEEEEEECCCCTT
T ss_pred             HHHHHHHHCCCCCC-CEEEECCCCCCCHH---------HHHHHCCCCCEEEEEEECCCC
T ss_conf             99999982286758-85887166897289---------999760487468999827875


No 129
>>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure initiative; HET: MSE; 2.15A {Enterococcus faecalis} (A:)
Probab=20.32  E-value=53  Score=13.37  Aligned_cols=22  Identities=14%  Similarity=0.255  Sum_probs=14.7

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCH
Q ss_conf             6899999999732687110383
Q gi|254780429|r   76 VSIAVARGISLVLKQPALGVGN   97 (206)
Q Consensus        76 igia~akgLa~~~~~pv~gvss   97 (206)
                      .|.++=-|+|+++|+|++.+..
T Consensus        84 ~Gt~~ElG~A~a~gkpV~~~~~  105 (162)
T 3ehd_A           84 AGVASEIGVAYAKGIPVVALYT  105 (162)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECC
T ss_pred             CCHHHHHHHHHHCCCEEEEEEC
T ss_conf             7899999999986996999971


No 130
>>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} (A:)
Probab=20.18  E-value=49  Score=13.60  Aligned_cols=23  Identities=22%  Similarity=0.088  Sum_probs=15.8

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf             68999999997326871103838
Q gi|254780429|r   76 VSIAVARGISLVLKQPALGVGNL   98 (206)
Q Consensus        76 igia~akgLa~~~~~pv~gvssl   98 (206)
                      .|.++=-|+|+++|+|++++.+-
T Consensus        93 ~Gt~~EiG~A~a~gkpvi~~~~d  115 (157)
T 1f8y_A           93 VGLGMELGYALSQGKYVLLVIPD  115 (157)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECG
T ss_pred             CCCHHHHHHHHCCCCEEEEEECC
T ss_conf             25006544444078489999360


Done!