HHSEARCH alignment of GI: 254780429 and SCOP domain: d1hjra_

Alignment

Probab=95.40  E-value=0.034  Score=31.58  Aligned_cols=99  Identities=13%  Similarity=0.105  Sum_probs=67.5

Q ss_pred             CEEEEECCCHHHEEEEEECCCCE--EEEEEEE-ECCHHHHH---HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
Q ss_conf             27886216801278999779813--9999998-42268999---899999999976099987866543037854320246
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGR--ILGSYFK-NLGRGHAE---HLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVR   75 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~--~~~~~~~-~~~r~hs~---~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlR   75 (206)
                      +||+||-++..+..|+++.++++  .+..-.. ..+..+.+   .|...+.+++++.+.+.--+..+.++..+-|-..+-
T Consensus         2 iILGIDPGl~~~G~avid~~~~~~~~v~~g~i~t~~~~~~~Rl~~i~~~l~~li~~~~Pd~vaiE~~f~~~n~~sa~~l~   81 (158)
T d1hjra_           2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLG   81 (158)
T ss_dssp             EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHH
T ss_pred             EEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCHHHHHHHH
T ss_conf             89998367786589999964987899995279679987699999999999999853499878987400024889999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             6899999999732687110383899
Q gi|254780429|r   76 VSIAVARGISLVLKQPALGVGNLEV  100 (206)
Q Consensus        76 igia~akgLa~~~~~pv~gvssle~  100 (206)
                      -.-.++.-.+...++|+..++--++
T Consensus        82 ~arG~i~l~a~~~~ipi~e~~P~~v  106 (158)
T d1hjra_          82 QARGVAIVAAVNQELPVFEYAARQV  106 (158)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEECCHHHH
T ss_conf             9999999999980865012441422

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: RuvC resolvase
domain: RuvC resolvase
species: Escherichia coli [TaxId: 562]