RPSBLAST alignment for GI: 254780429 and conserved domain: TIGR03723

>gnl|CDD|163435 TIGR03723, bact_gcp, putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas (which lack a cell wall). A reasonable hypothesis is that virulence-related activities after export are secondary to a bacterial domain-wide unknown function. Length = 314
 Score = 51.7 bits (125), Expect = 1e-07
 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 22/120 (18%)

Query: 3   VLALDTTGADCSVAIYDSHAGRILGS-------YFKNLG--------RGHAEHLMPAIDY 47
           +L ++T+  + +VAI D   G +L +            G        R H E + P I+ 
Sbjct: 1   ILGIETSCDETAVAIVDDGKG-LLSNIVASQIELHARYGGVVPELASRAHLEAIPPLIEE 59

Query: 48  ALKDSRLEVSQVDRV-VTALGPGSFTGVRVSIAVARGISLVLKQPALGVGNLEVLARAHL 106
           AL ++ L +S +D + VTA GPG    + V ++ A+ ++L L +P +GV +LE     HL
Sbjct: 60  ALAEAGLTLSDIDAIAVTA-GPGLIGALLVGVSFAKALALALNKPLIGVNHLE----GHL 114