RPSBLAST alignment of GI: 254780429 and protein with PDBid: 2pff

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 38.6 bits (89), Expect = 0.001
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 34/106 (32%)

Query: 113  PI--MVLVSLFHQKVCCQKFSLDGVSCSDPVLLNYEQTR----SEVDNFEGEIVGSGLSA 166
            PI   VLVS+       + F   G++  DP    YE  +    SEV N  G  +G G+SA
Sbjct: 1011 PITLFVLVSV------VEAFIASGIT--DP----YEMYKYVHVSEVGNCSGSGMG-GVSA 1057

Query: 167  IRG----------IENDI-DHLPMDVLS----RLGITKSSPFPSPI 197
            +RG          ++NDI     ++ +S     L I+ S P  +P+
Sbjct: 1058 LRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPV 1103