HHsearch alignment of GI: 254780430 and MMDB domain: 1th5_A_

>1th5_A (A:) NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa}
Probab=99.76  E-value=4.1e-19  Score=139.88  Aligned_cols=70  Identities=20%  Similarity=0.413  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             26889999999998777787-5289759996433479999636646666689999999999999978970035539
Q gi|254780430|r  115 SAVVQRIKEVLDNRVRPAVA-RDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV  189 (189)
Q Consensus       115 ~~~~~~i~~~l~~~IrP~l~-~dGG~i~~~~~~~g~v~v~~~GaC~~Cpss~~Tl~~gie~~l~~~vpev~~V~~v  189 (189)
                      +++.++|+++|++ |||+++ +||||++|+++++|+|||+|+|||+|||+    |+++||++|++++|+++.|++|
T Consensus         3 ~~~~~~I~~~L~~-irp~l~~~dGGdielv~v~~~~V~V~l~GaC~gCpT----l~~~Ie~~L~~~ipei~~V~~V   73 (74)
T 1th5_A            3 ELNEENVEKVLNE-IRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVRT----VRIAVSKKLREKIPSIQIVQLL   73 (74)
T ss_dssp             CCSHHHHHHHHTT-THHHHTTTTCCCCCCCEEETTEEEECCCSSSSSSSS----HHHHHHHHHHHHCTTCSEEEEC
T ss_pred             CCCHHHHHHHHHH-HCHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCHH----HHHHHHHHHHHHCCCCCEEEEC
T ss_conf             6689999999998-563040268971999995299999995588765405----9999999999879984089944