HHsearch alignment of GI: 254780430 and MMDB domain: 1veh_A_

>1veh_A (A:) NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus}
Probab=99.91  E-value=2.9e-24  Score=171.99  Aligned_cols=81  Identities=47%  Similarity=0.922  Sum_probs=76.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             44544026889999999998777787528975999643347999963664666668999999999999997897003553
Q gi|254780430|r  109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT  188 (189)
Q Consensus       109 ~~~~~~~~~~~~i~~~l~~~IrP~l~~dGG~i~~~~~~~g~v~v~~~GaC~~Cpss~~Tl~~gie~~l~~~vpev~~V~~  188 (189)
                      ....+++++.++|+++|+++|||+|++|||||+|+++++|+|||+|+|||+|||||..||+++||++|++++|++..|++
T Consensus         6 ~~~~~~~~~~~~i~~~l~~~IrP~l~~dGGdi~lv~v~~g~v~v~l~GaC~gCp~s~~Tl~~~Ie~~L~~~~p~v~~V~~   85 (92)
T 1veh_A            6 SGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQ   85 (92)
T ss_dssp             SSCSSCCHHHHHHHHHHHHTTHHHHHHHSCCCCEEEEETTEEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSSCCCEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             78876289999999999984176789669976999960887899827878998408999999999999997898665987


Q ss_pred             C
Q ss_conf             9
Q gi|254780430|r  189 V  189 (189)
Q Consensus       189 v  189 (189)
                      |
T Consensus        86 v   86 (92)
T 1veh_A           86 V   86 (92)
T ss_dssp             C
T ss_pred             C
T ss_conf             2